BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020411
(326 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225431711|ref|XP_002267516.1| PREDICTED: histone deacetylase 14 [Vitis vinifera]
gi|296088531|emb|CBI37522.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 288/327 (88%), Positives = 307/327 (93%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
MEL+ FRGSEI+EL +FSPASV+DIASVH +AYVSGLEK+MD+ASQ+GII I+GSGPTY
Sbjct: 111 MELSPMFRGSEILELHSFSPASVEDIASVHTKAYVSGLEKSMDQASQKGIIYIDGSGPTY 170
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
ATATTFQESL AAGAGI LVDSV AASK+ DPP+GFALIRPPGHHAIPKGPMGFCVFGN
Sbjct: 171 ATATTFQESLLAAGAGITLVDSVVAASKSSQDPPMGFALIRPPGHHAIPKGPMGFCVFGN 230
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAARYAQR HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV
Sbjct: 231 VAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 290
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G G GEG+TLNLPLPGGSGD AMRTVF EVIVP AQRFKPD+ILVSAGYD HVLDPLASL
Sbjct: 291 GHGSGEGATLNLPLPGGSGDIAMRTVFDEVIVPSAQRFKPDIILVSAGYDGHVLDPLASL 350
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGTYYMLA+NIKQLAKDLCG RCVFFLEGGYNL+SLSYSVADSFRAFLGEPS ASEF
Sbjct: 351 QFTTGTYYMLASNIKQLAKDLCGGRCVFFLEGGYNLSSLSYSVADSFRAFLGEPSLASEF 410
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
D+PAILYEEPS KVKQAI++VKH+HSL
Sbjct: 411 DDPAILYEEPSTKVKQAIQKVKHLHSL 437
>gi|255550502|ref|XP_002516301.1| Histone deacetylase, putative [Ricinus communis]
gi|223544531|gb|EEF46048.1| Histone deacetylase, putative [Ricinus communis]
Length = 425
Score = 586 bits (1510), Expect = e-165, Method: Compositional matrix adjust.
Identities = 280/327 (85%), Positives = 306/327 (93%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
MEL+++FRG EIIEL++F PAS DIASVHA+AYV+GLEKAMD+ASQ+GII I+G+GPTY
Sbjct: 99 MELSAKFRGPEIIELQHFKPASAIDIASVHAKAYVAGLEKAMDQASQEGIIFIDGTGPTY 158
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
ATATTFQESL AAGAG+ALVDSV AAS N +PP GFALIRPPGHHAIPKGPMGFCVFGN
Sbjct: 159 ATATTFQESLMAAGAGLALVDSVVAASNNSQNPPTGFALIRPPGHHAIPKGPMGFCVFGN 218
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAAR+AQR HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV
Sbjct: 219 VAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 278
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+GDGEG+TLNLPLPGGSGD AMRTVF EVIVPCAQRFKPD+ILVSAGYD HVLDPLASL
Sbjct: 279 GQGDGEGTTLNLPLPGGSGDVAMRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLASL 338
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGT+YMLA+NI QLAKD+CG RC+FFLEGGYNL+SLSYSVADSFRAFLGE S ASEF
Sbjct: 339 QFTTGTFYMLASNITQLAKDMCGGRCIFFLEGGYNLDSLSYSVADSFRAFLGETSLASEF 398
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNPAILYEEP +VKQAI++V+HIHSL
Sbjct: 399 DNPAILYEEPLTRVKQAIQKVRHIHSL 425
>gi|388514335|gb|AFK45229.1| unknown [Lotus japonicus]
Length = 413
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 277/327 (84%), Positives = 304/327 (92%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
M+LT +FRGSEIIEL++F PASVDDIASVHARAYV GLEK MD+A ++G+ILIEGSGPTY
Sbjct: 87 MKLTPKFRGSEIIELQHFEPASVDDIASVHARAYVFGLEKVMDQAMEEGLILIEGSGPTY 146
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT+TTFQES+ AAGAG+ALVDSV AASK + DPP GFALIRPPGHHA+P+GPMGFCVFGN
Sbjct: 147 ATSTTFQESIVAAGAGLALVDSVVAASKIKRDPPTGFALIRPPGHHAVPQGPMGFCVFGN 206
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAARYAQR H LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS HQDGSYPGTGK DEV
Sbjct: 207 VAIAARYAQRVHALKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSFHQDGSYPGTGKFDEV 266
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G GDGEG+TLNLPLPGGSGDTA+RTVF EV+VPCAQRFKPD+ILVSAGYD HVLDPLA+L
Sbjct: 267 GTGDGEGTTLNLPLPGGSGDTAIRTVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANL 326
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGTYYMLA++IKQLAKDLCG RCVFFLEGGYNL SLSYSVADSFRA +G+ S ASEF
Sbjct: 327 QFTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADSFRALIGDQSLASEF 386
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNP ILYEEP+AK+KQAI+R+KHIHSL
Sbjct: 387 DNPNILYEEPTAKIKQAIQRIKHIHSL 413
>gi|224083458|ref|XP_002307035.1| histone deacetylase [Populus trichocarpa]
gi|222856484|gb|EEE94031.1| histone deacetylase [Populus trichocarpa]
Length = 390
Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/326 (85%), Positives = 303/326 (92%), Gaps = 1/326 (0%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
ELTS+FRGSEIIEL++F PAS+DDIA+VHARAYV+GLEKAMD+AS+QGII I+GSGPTYA
Sbjct: 65 ELTSKFRGSEIIELQDFKPASLDDIANVHARAYVAGLEKAMDQASEQGIIYIDGSGPTYA 124
Query: 62 TATTFQESLAAAGAGIALVDSVAASKN-RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
TATTF+ESL AAGAG+ LVDSV A+ N +PP GFALIRPPGHHAIPKGPMGFCVFGNV
Sbjct: 125 TATTFRESLVAAGAGLTLVDSVVAASNCSQNPPTGFALIRPPGHHAIPKGPMGFCVFGNV 184
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQ HGLKRVFIIDFDVHHGNGTNDAF+DDPDI+FLSTHQDGSYPGTGKIDE+G
Sbjct: 185 AIAARHAQLVHGLKRVFIIDFDVHHGNGTNDAFFDDPDIYFLSTHQDGSYPGTGKIDEIG 244
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
GDGEG+TLNLPLPGGSGD +MRTVF EVIVP AQRFKPD+ILVSAGYDAHVLDPL SLQ
Sbjct: 245 HGDGEGTTLNLPLPGGSGDISMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLGSLQ 304
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
FTTGTYY LA+NIK+LAKDLCG RCVFFLEGGYNL+SLSYSV DSFRAFLGE S ASEFD
Sbjct: 305 FTTGTYYTLASNIKELAKDLCGGRCVFFLEGGYNLDSLSYSVTDSFRAFLGEKSLASEFD 364
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
NPAILYEEPS KVKQAI+RVKHIHSL
Sbjct: 365 NPAILYEEPSTKVKQAIQRVKHIHSL 390
>gi|449461867|ref|XP_004148663.1| PREDICTED: histone deacetylase 14-like [Cucumis sativus]
Length = 442
Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/327 (83%), Positives = 299/327 (91%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
MELT +F GS +I+L+N+ PASVDDI SVH+++YV+GLEKAMDRAS+ G+ILIEGSGPTY
Sbjct: 116 MELTPKFLGSNVIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTY 175
Query: 61 ATATTFQESLAAAGAGIALVDSVA-ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
ATATTF ESL AAGAGI+LVDSV AS+ +PP+GFALIRPPGHHA+PKGPMGFCVFGN
Sbjct: 176 ATATTFNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGN 235
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAARYAQR HGLKRVFIIDFD HHGNGT+DAFYDD DIFFLSTHQDGSYPGTGKIDEV
Sbjct: 236 VAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEV 295
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G GDGEG+TLN+PLPGGSGD AM+ VF EVIVPCAQRFKPD+ILVSAGYDAHVLDPLA+L
Sbjct: 296 GCGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANL 355
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGTYYMLA+NIKQLAK+LCG RC+FFLEGGYNL SLSYSVADSFRAFL EPS ASEF
Sbjct: 356 QFTTGTYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEF 415
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNPAILYEEPS K KQ I++VK IHSL
Sbjct: 416 DNPAILYEEPSRKFKQVIQKVKQIHSL 442
>gi|449507477|ref|XP_004163043.1| PREDICTED: histone deacetylase 14-like [Cucumis sativus]
Length = 442
Score = 572 bits (1474), Expect = e-161, Method: Compositional matrix adjust.
Identities = 272/327 (83%), Positives = 299/327 (91%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
MELT +F GS +I+L+N+ PASVDDI SVH+++YV+GLEKAMDRAS+ G+ILIEGSGPTY
Sbjct: 116 MELTPKFLGSNVIQLENYKPASVDDIVSVHSKSYVAGLEKAMDRASRDGLILIEGSGPTY 175
Query: 61 ATATTFQESLAAAGAGIALVDSVA-ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
ATATTF ESL AAGAGI+LVDSV AS+ +PP+GFALIRPPGHHA+PKGPMGFCVFGN
Sbjct: 176 ATATTFNESLVAAGAGISLVDSVVKASQTHKNPPIGFALIRPPGHHAVPKGPMGFCVFGN 235
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAARYAQR HGLKRVFIIDFD HHGNGT+DAFYDD DIFFLSTHQDGSYPGTGKIDEV
Sbjct: 236 VAIAARYAQRVHGLKRVFIIDFDAHHGNGTSDAFYDDSDIFFLSTHQDGSYPGTGKIDEV 295
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G GDGEG+TLN+PLPGGSGD AM+ VF EVIVPCAQRFKPD+ILVSAGYDAHVLDPLA+L
Sbjct: 296 GCGDGEGTTLNIPLPGGSGDYAMKMVFDEVIVPCAQRFKPDIILVSAGYDAHVLDPLANL 355
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGTYYMLA+NIKQLAK+LCG RC+FFLEGGYNL SLSYSVADSFRAFL EPS ASEF
Sbjct: 356 QFTTGTYYMLASNIKQLAKELCGGRCIFFLEGGYNLESLSYSVADSFRAFLDEPSMASEF 415
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNPAILYEEPS K KQ I++VK IHSL
Sbjct: 416 DNPAILYEEPSRKFKQVIQKVKQIHSL 442
>gi|357519987|ref|XP_003630282.1| Histone deacetylase [Medicago truncatula]
gi|355524304|gb|AET04758.1| Histone deacetylase [Medicago truncatula]
Length = 420
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 270/327 (82%), Positives = 302/327 (92%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
M+LTS+FRGSE+IEL+NF PAS DDIASVHARAYVSGLEK MD+A ++G+I+++GSGPTY
Sbjct: 94 MKLTSKFRGSEVIELQNFEPASTDDIASVHARAYVSGLEKVMDQALEKGLIVVDGSGPTY 153
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT+TTFQES+ AAGAG+ALVDSV AASK DPP GFALIRPPGHHAIPKGPMGFC+FGN
Sbjct: 154 ATSTTFQESIVAAGAGLALVDSVVAASKIMKDPPTGFALIRPPGHHAIPKGPMGFCIFGN 213
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAAR+AQR HGLKRVFIIDFDVHHGNGTNDAFYDDPD+FFLS HQDGSYPGTGK DEV
Sbjct: 214 VAIAARHAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEV 273
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G GDGEG+TLNLPLPGGSGDTA+R+VF EV+VPCAQRFKPD+ILVSAGYD HVLDPLA+L
Sbjct: 274 GAGDGEGTTLNLPLPGGSGDTAIRSVFDEVVVPCAQRFKPDIILVSAGYDGHVLDPLANL 333
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
Q TTGTYYMLA++IKQLAKDLCG RCVFFLEGGYNL SLSYSVAD+FRA LG+ S ASEF
Sbjct: 334 QLTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDKSLASEF 393
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNP ILYEEP+ K+KQAI+R+K +HSL
Sbjct: 394 DNPNILYEEPTKKIKQAIQRIKCVHSL 420
>gi|356512844|ref|XP_003525125.1| PREDICTED: histone deacetylase 14-like [Glycine max]
Length = 417
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/327 (82%), Positives = 302/327 (92%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
M+LTS+FRG E+IEL++F PASVDDIASVHARAYVSGLEK MD+A ++G+I ++GSGPTY
Sbjct: 91 MQLTSKFRGPEVIELQHFEPASVDDIASVHARAYVSGLEKVMDQAVEKGLIFLDGSGPTY 150
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
ATATTFQES+ AAGAG+ALVDSV A SK + D P GFALIRPPGHHA+P+GPMGFC+FGN
Sbjct: 151 ATATTFQESIVAAGAGLALVDSVVACSKIKGDAPTGFALIRPPGHHAVPQGPMGFCIFGN 210
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
VAIAARY+QR HGLKRVFIIDFDVHHGNGTNDAFYDDPD+FFLS HQDGSYPGTGK DEV
Sbjct: 211 VAIAARYSQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPDVFFLSFHQDGSYPGTGKFDEV 270
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G GDGEG+TLNLPLPGGSGDTA+RTVF EVIVPCAQRFKPD+ILVSAGYD HVLDPLA+L
Sbjct: 271 GSGDGEGTTLNLPLPGGSGDTAIRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANL 330
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
Q+TTGTYYMLA++IKQLAKDLCG RCVFFLEGGYNL SLSYSVAD+FRA LG+ S ASEF
Sbjct: 331 QYTTGTYYMLASSIKQLAKDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDRSLASEF 390
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNP ILYEEPS KVKQAI+++KHIHSL
Sbjct: 391 DNPNILYEEPSTKVKQAIQKIKHIHSL 417
>gi|18418220|ref|NP_567921.1| histone deacetylase 14 [Arabidopsis thaliana]
gi|75249520|sp|Q941D6.1|HDA14_ARATH RecName: Full=Histone deacetylase 14
gi|15529220|gb|AAK97704.1| AT4g33470/F17M5_230 [Arabidopsis thaliana]
gi|21360523|gb|AAM47377.1| AT4g33470/F17M5_230 [Arabidopsis thaliana]
gi|332660831|gb|AEE86231.1| histone deacetylase 14 [Arabidopsis thaliana]
Length = 423
Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/326 (79%), Positives = 290/326 (88%), Gaps = 1/326 (0%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
ELT +FRGS+I+EL NF A+V+DIA+VH +AYV GLEKAMD AS G+I IEGSGPTYA
Sbjct: 98 ELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYA 157
Query: 62 TATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
T+TTFQ+SL AAGAG+ALVDSV AAS+N DPP+GFALIRPPGHHA+PKGPMGFCVFGNV
Sbjct: 158 TSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFCVFGNV 217
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQR HGLKR+FIIDFDVHHGNGTNDAF +DPDIFFLSTHQDGSYPGTGKI ++G
Sbjct: 218 AIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSYPGTGKISDIG 277
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
+G GEG+TLNLPLPGGSGD AMRTVF E+IVPCAQRFKPD+ILVSAGYDAHVLDPLA+LQ
Sbjct: 278 KGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHVLDPLANLQ 337
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
FTT TYY LA +IK+LAK++CG RCVFFLEGGYNL SLS SVADSFRA LGE S ASEFD
Sbjct: 338 FTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGEDSLASEFD 397
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
NPA LY+EP KV+ AI+R K IH L
Sbjct: 398 NPAYLYDEPMRKVRDAIQRAKSIHCL 423
>gi|297798586|ref|XP_002867177.1| hypothetical protein ARALYDRAFT_913072 [Arabidopsis lyrata subsp.
lyrata]
gi|297313013|gb|EFH43436.1| hypothetical protein ARALYDRAFT_913072 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 260/326 (79%), Positives = 289/326 (88%), Gaps = 1/326 (0%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
ELT +FRGS+++EL NF A+++DIA+VH +AYV GLEKAMD AS G+I IEGSGPTYA
Sbjct: 96 ELTPKFRGSQVLELANFKTATIEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYA 155
Query: 62 TATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
T+TTFQ+SL AAGAG+ALVDSV AAS+N PDPP GFALIRPPGHHA+PKGPMGFCVFGNV
Sbjct: 156 TSTTFQDSLIAAGAGMALVDSVIAASRNSPDPPTGFALIRPPGHHAVPKGPMGFCVFGNV 215
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQ HGLKRVFIIDFDVHHGNGTNDAF +DPDIFFLSTHQDGSYPGTGKI ++G
Sbjct: 216 AIAARHAQYTHGLKRVFIIDFDVHHGNGTNDAFSEDPDIFFLSTHQDGSYPGTGKISDIG 275
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
+G GEG+TLNLPLPGGSGD AM TVF E+IVPCAQRFKPDLILVSAGYDAHVLDPLA+LQ
Sbjct: 276 KGKGEGTTLNLPLPGGSGDIAMGTVFEEIIVPCAQRFKPDLILVSAGYDAHVLDPLANLQ 335
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
FTTGTYY LA +IKQLAK++CG RCVFFLEGGYNL SLS SVADSFRA LGE S ASEFD
Sbjct: 336 FTTGTYYSLARDIKQLAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGEESLASEFD 395
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
NPA LY+EP KV+ AI+R K IH L
Sbjct: 396 NPAYLYDEPMRKVRDAIDRAKSIHCL 421
>gi|195631570|gb|ACG36680.1| histone deacetylase 10 [Zea mays]
Length = 430
Score = 530 bits (1366), Expect = e-148, Method: Compositional matrix adjust.
Identities = 248/327 (75%), Positives = 294/327 (89%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+EL+ + RGS+++E++NF+PAS+DD+A VH+R+Y++GLEKAM RAS +G+ILIEG+GPTY
Sbjct: 104 LELSPKHRGSQVLEIQNFNPASLDDVARVHSRSYITGLEKAMGRASDEGLILIEGTGPTY 163
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT TTF+ESL +AGAGI LVDSV AASK P+PPLGFALIRPPGHHA+P+GPMGFCVFGN
Sbjct: 164 ATETTFRESLLSAGAGITLVDSVVAASKLGPNPPLGFALIRPPGHHAVPQGPMGFCVFGN 223
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+AARYAQ HGLKRV IIDFDVHHGNGT+D+FYDDPDIFFLSTHQ GSYPGTGKI+EV
Sbjct: 224 IAVAARYAQHQHGLKRVMIIDFDVHHGNGTSDSFYDDPDIFFLSTHQLGSYPGTGKINEV 283
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+GDGEG+TLNLPLPGG+GD AMR F EVI P A RFKPD+ILVSAGYDAH LDPLA L
Sbjct: 284 GQGDGEGTTLNLPLPGGAGDYAMRCAFDEVIAPSAHRFKPDIILVSAGYDAHALDPLAGL 343
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGT+YMLA++IKQ+ K+LCG RCVFFLEGGYNL SLS SVAD+FRAFL EPS A++F
Sbjct: 344 QFTTGTFYMLASSIKQVTKELCGGRCVFFLEGGYNLQSLSSSVADTFRAFLDEPSLAAQF 403
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
D+PAIL+EEP+ K+K+AIE+ K IHSL
Sbjct: 404 DDPAILFEEPTRKIKEAIEKAKSIHSL 430
>gi|357160621|ref|XP_003578822.1| PREDICTED: histone deacetylase 14-like [Brachypodium distachyon]
Length = 444
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 249/327 (76%), Positives = 288/327 (88%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+ELT + RGS+++E++NF PAS+DD+A VH+R Y++GLEKAM RAS +G+I IEG+GPTY
Sbjct: 118 LELTPKHRGSQVLEIQNFHPASLDDVARVHSRKYITGLEKAMSRASDEGLIFIEGTGPTY 177
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT TTFQESL AAGAGI LVDSV AASK P PPLGFAL+RPPGHHA+P+GPMGFCVFGN
Sbjct: 178 ATQTTFQESLLAAGAGITLVDSVVAASKLGPSPPLGFALVRPPGHHAVPEGPMGFCVFGN 237
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+AARYAQ HGLKRV IIDFDVHHGNGT DAFYDDPDIFFLSTHQ GSYPGTGK++ +
Sbjct: 238 IAVAARYAQHQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKMNLI 297
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+G EG+TLNLPLPGGSGD +MR F EVI P AQRFKPD+ILVSAGYDAH LDPLA L
Sbjct: 298 GQGSSEGTTLNLPLPGGSGDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHALDPLAGL 357
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGTYY LA++IKQLA DLCG RCVFFLEGGYNL SLS SVAD+FRAFL EPS A++F
Sbjct: 358 QFTTGTYYTLASSIKQLAGDLCGGRCVFFLEGGYNLQSLSSSVADTFRAFLDEPSLAAQF 417
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNPA+LYEEP+ +VK+AIE+V+H+HSL
Sbjct: 418 DNPAMLYEEPTRRVKEAIEKVRHLHSL 444
>gi|218186539|gb|EEC68966.1| hypothetical protein OsI_37706 [Oryza sativa Indica Group]
Length = 443
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 247/327 (75%), Positives = 290/327 (88%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+ELTS+ RGS+++E+++F PAS+DDIA VH+R+Y++GLEKAM RAS +G+I IEG+GPTY
Sbjct: 117 LELTSKHRGSQVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTY 176
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT TTFQE L +AGAGI LVDSV AASK P PPLGFAL+RPPGHHA+P+GPMGFCVFGN
Sbjct: 177 ATQTTFQECLLSAGAGIILVDSVVAASKLGPKPPLGFALVRPPGHHAVPEGPMGFCVFGN 236
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+AARYAQ HGLKRV IIDFDVHHGNGT DAFYDDPDIFFLSTHQ GSYPGTGKI +V
Sbjct: 237 IAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKIHQV 296
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+G+GEG+TLNLPLPGGSGD AMR F EVI P AQRFKPD+ILVSAGYDAH LDPLA L
Sbjct: 297 GQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGL 356
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGT+YMLAA I+++A +LCG RCVFFLEGGYNL SLS SVAD+FRAFLGEPS A+ F
Sbjct: 357 QFTTGTFYMLAARIREVAAELCGGRCVFFLEGGYNLESLSSSVADTFRAFLGEPSLAARF 416
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
D+PA+LYEEP+ K+++AI++ KH+HSL
Sbjct: 417 DDPAMLYEEPTRKIREAIDKAKHLHSL 443
>gi|326489521|dbj|BAK01741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 444
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/327 (75%), Positives = 289/327 (88%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+ELTS+ RGS+I+E++NF PAS+DD+A VH+R Y++GLEKAM +A +G+I IEG+GPTY
Sbjct: 118 LELTSKHRGSQILEIRNFYPASLDDVARVHSRTYITGLEKAMSKALDEGLIFIEGTGPTY 177
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT TTF ESL +AGAGI LVDSV AASK P PPLGFALIRPPGHHA+P GPMGFCVFGN
Sbjct: 178 ATQTTFTESLLSAGAGITLVDSVVAASKLGPSPPLGFALIRPPGHHAVPDGPMGFCVFGN 237
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+AARYAQ HGLKRV IIDFDVHHGNGT DAFYDDPDIFFLSTHQ GSYPGTGK++ +
Sbjct: 238 IAVAARYAQHQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKMNLI 297
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+G GEG+TLNLPLPGGSGD +MR F +VI P AQRFKPD+ILVSAGYDAH LDPLA L
Sbjct: 298 GQGSGEGTTLNLPLPGGSGDYSMRCAFDDVIAPSAQRFKPDIILVSAGYDAHALDPLAGL 357
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGT+YMLA++IKQLA++LCG RCVFFLEGGYNL SLS SVAD+FRAFL EPS A++F
Sbjct: 358 QFTTGTFYMLASSIKQLARELCGGRCVFFLEGGYNLQSLSSSVADTFRAFLDEPSLAAQF 417
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
DNPA+LYEEP+ ++K+AIE+V+H+HSL
Sbjct: 418 DNPAMLYEEPTRRIKEAIEKVRHLHSL 444
>gi|115487670|ref|NP_001066322.1| Os12g0182700 [Oryza sativa Japonica Group]
gi|77553168|gb|ABA95964.1| Histone deacetylase family protein, expressed [Oryza sativa
Japonica Group]
gi|113648829|dbj|BAF29341.1| Os12g0182700 [Oryza sativa Japonica Group]
gi|215704191|dbj|BAG93031.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616744|gb|EEE52876.1| hypothetical protein OsJ_35446 [Oryza sativa Japonica Group]
Length = 443
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/327 (75%), Positives = 290/327 (88%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+ELTS+ RGS+++E+++F PAS+DDIA VH+R+Y++GLEKAM RAS +G+I IEG+GPTY
Sbjct: 117 LELTSKHRGSQVLEIQDFQPASLDDIALVHSRSYITGLEKAMSRASDEGLIFIEGTGPTY 176
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT TTFQE L +AGAGI LVDSV AASK P PPLGFAL+RPPGHHA+P+GPMGFCVFGN
Sbjct: 177 ATQTTFQECLLSAGAGITLVDSVVAASKLGPKPPLGFALVRPPGHHAVPEGPMGFCVFGN 236
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+AARYAQ HGLKRV IIDFDVHHGNGT DAFY+DPDIFFLSTHQ GSYPGTGKI +V
Sbjct: 237 IAVAARYAQNQHGLKRVMIIDFDVHHGNGTCDAFYEDPDIFFLSTHQLGSYPGTGKIHQV 296
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+G+GEG+TLNLPLPGGSGD AMR F EVI P AQRFKPD+ILVSAGYDAH LDPLA L
Sbjct: 297 GQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQRFKPDIILVSAGYDAHALDPLAGL 356
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGT+YMLAA I+++A +LCG RCVFFLEGGYNL SLS SVAD+FRAFLGEPS A+ F
Sbjct: 357 QFTTGTFYMLAARIREVAAELCGGRCVFFLEGGYNLESLSSSVADTFRAFLGEPSLAARF 416
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
D+PA+LYEEP+ K+++AI++ KH+HSL
Sbjct: 417 DDPAMLYEEPTRKIREAIDKAKHLHSL 443
>gi|242054889|ref|XP_002456590.1| hypothetical protein SORBIDRAFT_03g038950 [Sorghum bicolor]
gi|241928565|gb|EES01710.1| hypothetical protein SORBIDRAFT_03g038950 [Sorghum bicolor]
Length = 430
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 249/327 (76%), Positives = 291/327 (88%), Gaps = 1/327 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+EL+ + RGS+++E++NF+PAS+DD+A VH+R+Y++GLEKAM RAS +G+I IEG+GPTY
Sbjct: 104 LELSPKHRGSQVLEIQNFNPASLDDVARVHSRSYITGLEKAMRRASDEGLIFIEGTGPTY 163
Query: 61 ATATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
AT TTFQESL +AGAGI LVDSV AASK P+PPLGFAL+RPPGHHA+P+GPMGFCVFGN
Sbjct: 164 ATETTFQESLLSAGAGITLVDSVVAASKLGPNPPLGFALVRPPGHHAVPQGPMGFCVFGN 223
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+AARYAQ HGLKRV IIDFDVHHGNGT+DAFY DPDIFFLSTHQ GSYPGTGKI+EV
Sbjct: 224 IAVAARYAQHQHGLKRVMIIDFDVHHGNGTSDAFYVDPDIFFLSTHQLGSYPGTGKINEV 283
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G+GDGEG+TLNLPLPGG+GD AMR F EVI P A RFKPD+ILVSAGYDAHVLDPLA L
Sbjct: 284 GQGDGEGTTLNLPLPGGAGDYAMRYAFDEVIAPSAHRFKPDIILVSAGYDAHVLDPLAGL 343
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
QFTTGT+YMLA +IKQLAK+LCG RCVFFLEGGYNL SLS SVAD+FRAFL E S A++F
Sbjct: 344 QFTTGTFYMLAFSIKQLAKELCGGRCVFFLEGGYNLQSLSSSVADTFRAFLDETSLAAQF 403
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHSL 326
D+PAIL+EEP+ K+K AIE+ K IHSL
Sbjct: 404 DDPAILFEEPTRKIKDAIEKAKGIHSL 430
>gi|4490314|emb|CAB38805.1| putative protein [Arabidopsis thaliana]
gi|7270295|emb|CAB80064.1| putative protein [Arabidopsis thaliana]
Length = 359
Score = 521 bits (1342), Expect = e-145, Method: Compositional matrix adjust.
Identities = 251/328 (76%), Positives = 283/328 (86%), Gaps = 4/328 (1%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
ELT +FRGS+I+EL NF A+V+DIA+VH +AYV GLEKAMD AS G+I IEGSGPTYA
Sbjct: 33 ELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYA 92
Query: 62 TATTFQESLAAAGAGIALVDSVAASK---NRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T+T ++AGAG+ALVDSV S+ N DPP+GFALIRPPGHHA+PKGPMGFCVFG
Sbjct: 93 TSTV-TALCSSAGAGMALVDSVVMSRLTINSVDPPIGFALIRPPGHHAVPKGPMGFCVFG 151
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVAIAAR+AQR HGLKR+FIIDFDVHHGNGTNDAF +DPDIFFLSTHQDGSYPGTGKI +
Sbjct: 152 NVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSYPGTGKISD 211
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
+G+G GEG+TLNLPLPGGSGD AMRTVF E+IVPCAQRFKPD+ILVSAGYDAHVLDPLA+
Sbjct: 212 IGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHVLDPLAN 271
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
LQFTT TYY LA +IK+LAK++CG RCVFFLEGGYNL SLS SVADSFRA LGE S ASE
Sbjct: 272 LQFTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGEDSLASE 331
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIHSL 326
FDNPA LY+EP KV+ AI+R K IH L
Sbjct: 332 FDNPAYLYDEPMRKVRDAIQRAKSIHCL 359
>gi|168028163|ref|XP_001766598.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
gi|162682243|gb|EDQ68663.1| class II RPD3 type histone deacetylase protein [Physcomitrella
patens subsp. patens]
Length = 436
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 229/326 (70%), Positives = 277/326 (84%), Gaps = 1/326 (0%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
+LT EFRG+E++ ++NF AS +D+A+VH+ YV GLE+AM +A +G+I ++ SGPTYA
Sbjct: 111 KLTPEFRGNEVLRIQNFKAASQEDVAAVHSLGYVKGLERAMQKAEDEGLIFLDNSGPTYA 170
Query: 62 TATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
T++T+ +S+ AAGA +ALVDSV AASK +PP+GFAL+RPPGHHA+P GPMGFCVFGN+
Sbjct: 171 TSSTYHDSMLAAGASLALVDSVVAASKETQNPPVGFALVRPPGHHAVPAGPMGFCVFGNI 230
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
A+AARYAQ+AHGL+RVFIID+DVHHGNGTNDAFYDD DI+FLSTHQDGSYPGTGK+ EVG
Sbjct: 231 AVAARYAQQAHGLQRVFIIDYDVHHGNGTNDAFYDDSDIYFLSTHQDGSYPGTGKMSEVG 290
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G GEG+TLNLPLPGGSGD M VF EVI P AQRFKPD+ILVSAG+DAHV DPLA +Q
Sbjct: 291 AGSGEGATLNLPLPGGSGDDTMARVFEEVIAPAAQRFKPDIILVSAGFDAHVQDPLAGMQ 350
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
FTTGTYY LA++IK LA+ LCG RCVFFLEGGY+L SLS SVADSFRAFLG+ S +S D
Sbjct: 351 FTTGTYYRLASDIKSLAQSLCGGRCVFFLEGGYDLKSLSNSVADSFRAFLGDKSLSSRLD 410
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
NPA+LY+EPS +QAI+ +K IHSL
Sbjct: 411 NPAVLYDEPSLYARQAIDEIKSIHSL 436
>gi|302818470|ref|XP_002990908.1| hypothetical protein SELMODRAFT_161290 [Selaginella moellendorffii]
gi|300141239|gb|EFJ07952.1| hypothetical protein SELMODRAFT_161290 [Selaginella moellendorffii]
Length = 285
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/286 (72%), Positives = 238/286 (83%), Gaps = 2/286 (0%)
Query: 42 MDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRP 101
M +A+ G+I IEGSGPTYAT+TT++ES+ AAG +ALVDS+ S P PP+GFALIRP
Sbjct: 1 MGKAAADGLIFIEGSGPTYATSTTYEESMLAAGGSLALVDSLM-SVAGPRPPIGFALIRP 59
Query: 102 PGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFF 161
PGHHA+P GPMGFCVFGNVAIAAR+AQRAHGLKRVFIIDFDVHHGNGT DAFYDDPD+FF
Sbjct: 60 PGHHAVPAGPMGFCVFGNVAIAARHAQRAHGLKRVFIIDFDVHHGNGTQDAFYDDPDVFF 119
Query: 162 LSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
STHQDGSYPGTGK+ +VG DGEG+TLNLPLPGGSG AM T EVIVP +FKPD+
Sbjct: 120 CSTHQDGSYPGTGKMRQVGTRDGEGTTLNLPLPGGSGHAAMLTALKEVIVPSCLKFKPDI 179
Query: 222 ILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+LVSAGYDAHVLDPLASLQFTT TYY LA+ IKQLA+++C RCVFFLEGGYNL++LS S
Sbjct: 180 LLVSAGYDAHVLDPLASLQFTTATYYHLASTIKQLAREVCNGRCVFFLEGGYNLDALSLS 239
Query: 282 VADSFRAFL-GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
VAD+FR L E S+A D+PA+LYEEP V++AI +K IHSL
Sbjct: 240 VADTFRGLLDDEESRAKLTDDPAVLYEEPLVGVRRAITEIKAIHSL 285
>gi|302802003|ref|XP_002982757.1| hypothetical protein SELMODRAFT_179763 [Selaginella moellendorffii]
gi|300149347|gb|EFJ16002.1| hypothetical protein SELMODRAFT_179763 [Selaginella moellendorffii]
Length = 367
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/326 (64%), Positives = 247/326 (75%), Gaps = 25/326 (7%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
+LT E RG EI L NF PAS D+A+VH+ +Y AM +A+ G+I IEGSGPTYA
Sbjct: 66 QLTPEKRGKEISRLTNFMPASKQDVAAVHSISY------AMGKAAADGLIFIEGSGPTYA 119
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T+TT++ES+ AAG +ALVDS+ + P PP+GFALIRPPGHHA+P GPMGFCVFGNVA
Sbjct: 120 TSTTYEESMLAAGGSLALVDSLMSVAG-PRPPIGFALIRPPGHHAVPAGPMGFCVFGNVA 178
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
IAAR+AQRAHGLKRVFIIDFDVHHGNGT DAFYDDPD+FF STHQDGSYPGTGK+ +VG
Sbjct: 179 IAARHAQRAHGLKRVFIIDFDVHHGNGTQDAFYDDPDVFFCSTHQDGSYPGTGKMRQVGT 238
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
DGEG+TLNLPLPGGSG AM T EVIVP +FKPD++LVSAGYDAHVLDPLASLQF
Sbjct: 239 RDGEGTTLNLPLPGGSGHAAMLTALEEVIVPSCLKFKPDILLVSAGYDAHVLDPLASLQF 298
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL-GEPSKASEFD 300
TT TYY LA+ IKQLA+++C SVAD+FR L E S+A D
Sbjct: 299 TTATYYHLASTIKQLAREVCNG-----------------SVADTFRGLLDDEESRAKLTD 341
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
+PA+LYEEP +V++AI +K IHSL
Sbjct: 342 DPAVLYEEPLVRVRRAITEIKAIHSL 367
>gi|302818488|ref|XP_002990917.1| hypothetical protein SELMODRAFT_448239 [Selaginella moellendorffii]
gi|300141248|gb|EFJ07961.1| hypothetical protein SELMODRAFT_448239 [Selaginella moellendorffii]
Length = 282
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/286 (69%), Positives = 232/286 (81%), Gaps = 5/286 (1%)
Query: 42 MDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRP 101
M +A+ G+I IEGSG TYAT+TT++ES+ AAG +ALVDS+ S P PP+GFALIRP
Sbjct: 1 MGKAAADGLIFIEGSGQTYATSTTYEESMLAAGGSLALVDSLM-SVAGPRPPIGFALIRP 59
Query: 102 PGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFF 161
PGHHA+P GP CVFGNVAIAAR+AQRAHGLKRVFIIDFDVHHGNGT DAFYDDPD+FF
Sbjct: 60 PGHHAVPAGP---CVFGNVAIAARHAQRAHGLKRVFIIDFDVHHGNGTQDAFYDDPDVFF 116
Query: 162 LSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDL 221
STHQDGSYPGTGK+ +VG DGEG+TL LPLPGGSG AM T EVIVP +FKPD+
Sbjct: 117 CSTHQDGSYPGTGKMRQVGTRDGEGTTLILPLPGGSGHAAMLTALEEVIVPSCLKFKPDI 176
Query: 222 ILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+LVSAGYDAHVLDPLASLQFTT TYY LA+ IKQLA+++C CVFFLEGGYNL++LS S
Sbjct: 177 LLVSAGYDAHVLDPLASLQFTTATYYHLASTIKQLAREVCNGSCVFFLEGGYNLDALSLS 236
Query: 282 VADSFRAFL-GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
VAD+FR L E S+A D+PA+LYEEP V++AI +K IHSL
Sbjct: 237 VADTFRGLLDDEESRAKLTDDPAVLYEEPLVGVRRAITEIKAIHSL 282
>gi|414879852|tpg|DAA56983.1| TPA: histone deacetylase 10 [Zea mays]
Length = 215
Score = 366 bits (939), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 170/215 (79%), Positives = 193/215 (89%)
Query: 112 MGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP 171
MGFCVFGN+A+AARYAQ HGLKRV IIDFDVHHGNGT+D+FYDDPDIFFLSTHQ GSYP
Sbjct: 1 MGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTSDSFYDDPDIFFLSTHQLGSYP 60
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
GTGKI+EVG+GDGEG+TLNLPLPGG+GD AMR F EVI P A RFKPD+ILVSAGYDAH
Sbjct: 61 GTGKINEVGQGDGEGTTLNLPLPGGAGDYAMRCAFDEVIAPSAHRFKPDIILVSAGYDAH 120
Query: 232 VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
LDPLA LQFTTGT+YMLA++IKQ+ K+LCG RCVFFLEGGYNL SLS SVAD+FRAFL
Sbjct: 121 ALDPLAGLQFTTGTFYMLASSIKQVTKELCGGRCVFFLEGGYNLQSLSSSVADTFRAFLD 180
Query: 292 EPSKASEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
EPS A++FD+PAIL+EEP+ K+K+AIE+ K IHSL
Sbjct: 181 EPSLAAQFDDPAILFEEPTRKIKEAIEKAKSIHSL 215
>gi|302818610|ref|XP_002990978.1| hypothetical protein SELMODRAFT_429326 [Selaginella moellendorffii]
gi|300141309|gb|EFJ08022.1| hypothetical protein SELMODRAFT_429326 [Selaginella moellendorffii]
Length = 274
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 180/293 (61%), Positives = 214/293 (73%), Gaps = 27/293 (9%)
Query: 42 MDRASQQGIILIEGSGPTYATAT-------TFQESLAAAGAGIALVDSVAASKNRPDPPL 94
M +A+ G+I I+GSGPTYAT+ T++ES+ AAG +ALVDS
Sbjct: 1 MGKATADGLIFIKGSGPTYATSMIFNNALKTYEESMLAAGESLALVDS------------ 48
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
L+ HHA+P GPMGFCVF NVAIAAR+ QRAHGLKRVFIIDFDVHHGNGT DAFY
Sbjct: 49 ---LMSVADHHAVPAGPMGFCVFSNVAIAARHTQRAHGLKRVFIIDFDVHHGNGTQDAFY 105
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DDPD+FF S HQ TGK+ +VG DG+G+TLNLPLPGGSG AM T EV+VPC
Sbjct: 106 DDPDVFFCSIHQ----ARTGKMRQVGTRDGKGTTLNLPLPGGSGHAAMLTALEEVMVPCC 161
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+FKPD++LVSAGYDAHVLDPLASLQFTT TY+ LA+ IKQLA+++C CVFFLEGGYN
Sbjct: 162 LKFKPDILLVSAGYDAHVLDPLASLQFTTATYHHLASTIKQLAREVCNGSCVFFLEGGYN 221
Query: 275 LNSLSYSVADSFRAFL-GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
L++LS SVAD FR L E S+A D+PA+LYEEP V++AI +K IHSL
Sbjct: 222 LDALSLSVADIFRGLLDDEESRAKLTDDPAVLYEEPLVGVRRAITEIKAIHSL 274
>gi|414879853|tpg|DAA56984.1| TPA: hypothetical protein ZEAMMB73_438198 [Zea mays]
Length = 247
Score = 350 bits (897), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 170/247 (68%), Positives = 193/247 (78%), Gaps = 32/247 (12%)
Query: 112 MGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP 171
MGFCVFGN+A+AARYAQ HGLKRV IIDFDVHHGNGT+D+FYDDPDIFFLSTHQ GSYP
Sbjct: 1 MGFCVFGNIAVAARYAQHQHGLKRVMIIDFDVHHGNGTSDSFYDDPDIFFLSTHQLGSYP 60
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAG---- 227
GTGKI+EVG+GDGEG+TLNLPLPGG+GD AMR F EVI P A RFKPD+ILVSAG
Sbjct: 61 GTGKINEVGQGDGEGTTLNLPLPGGAGDYAMRCAFDEVIAPSAHRFKPDIILVSAGSAAH 120
Query: 228 ----------------------------YDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
YDAH LDPLA LQFTTGT+YMLA++IKQ+ K+
Sbjct: 121 EQADPWVYEPADDQCSRLAKLTHHVRLRYDAHALDPLAGLQFTTGTFYMLASSIKQVTKE 180
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIER 319
LCG RCVFFLEGGYNL SLS SVAD+FRAFL EPS A++FD+PAIL+EEP+ K+K+AIE+
Sbjct: 181 LCGGRCVFFLEGGYNLQSLSSSVADTFRAFLDEPSLAAQFDDPAILFEEPTRKIKEAIEK 240
Query: 320 VKHIHSL 326
K IHSL
Sbjct: 241 AKSIHSL 247
>gi|384244964|gb|EIE18460.1| Arginase/deacetylase [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 344 bits (883), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 177/317 (55%), Positives = 220/317 (69%), Gaps = 7/317 (2%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
++ L +F PAS++D+ +H R YV GLEK + R + + + PTY T T+F ++L
Sbjct: 68 QLSRLTDFQPASIEDLCKIHERNYVLGLEKIVRRGRNE----VVDNAPTYITPTSFDDAL 123
Query: 71 AAAGAGIALVDSVA-ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
AAGA +ALVD+V S P GF + RPPGHHA+ KGPMGFC+FG VA+AAR+AQ+
Sbjct: 124 RAAGAAMALVDAVVEGSSAESIAPAGFGICRPPGHHAVAKGPMGFCLFGTVAVAARHAQQ 183
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
HGLK+V I DFDVHHGNGTND F+DDP + F+STHQ G YPGTG + EVG GDG G+++
Sbjct: 184 FHGLKKVLIFDFDVHHGNGTNDVFFDDPSVLFISTHQAGLYPGTGALSEVGTGDGAGASI 243
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
NLPLPG SGD M VF E++ P A RF+PD+ILVSAGYDAH DPLASLQ + TYY L
Sbjct: 244 NLPLPGDSGDAVMMEVFDEIVGPAAARFQPDIILVSAGYDAHWRDPLASLQMRSSTYYRL 303
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
AA IK LA L G RCVF LEGGY+L L SVA++FRA L PS +F N +L +EP
Sbjct: 304 AAKIKALADSLSGGRCVFLLEGGYDLKGLGESVAETFRAVLNLPS-IDKF-NADLLRDEP 361
Query: 310 SAKVKQAIERVKHIHSL 326
K + I K +HSL
Sbjct: 362 KDKARALITEAKRVHSL 378
>gi|308807393|ref|XP_003081007.1| histone deacetylase family protein (ISS) [Ostreococcus tauri]
gi|116059469|emb|CAL55176.1| histone deacetylase family protein (ISS) [Ostreococcus tauri]
Length = 389
Score = 316 bits (809), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 158/325 (48%), Positives = 212/325 (65%), Gaps = 7/325 (2%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
+L R +++EL A + VH + Y +GLE + + + PTY
Sbjct: 72 QLLGTHRPQDVMELTGVELAPKSALEGVHTKNYATGLELLCGTRAPVNL----DTAPTYC 127
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T +T+ +++ AGA IALVD V + P GF L+RPPGHHA P+G MGFC+ GN A
Sbjct: 128 TTSTYADAMRGAGAAIALVDEVCDRSKKGLTPSGFGLVRPPGHHATPRGAMGFCLVGNAA 187
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
+AAR+AQ+ G +RV I D+DVHHGNGTND F+ D + F+STH+DGSYPGTGK +VG
Sbjct: 188 VAARHAQK-RGHERVMIFDYDVHHGNGTNDIFHSDLSVLFVSTHEDGSYPGTGKFTDVGS 246
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
+G G+T+N+PLP GSGD A+ T F EV++P A RFKPD I+VSAGYDAH DPLA L F
Sbjct: 247 DEGIGATINIPLPPGSGDKAVLTAFEEVVMPGAARFKPDFIIVSAGYDAHWRDPLAGLTF 306
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+GTY+ L +K+LA +LC R VF LEGGY+L LS VADSFRA +G+ S ++F +
Sbjct: 307 RSGTYHRLCTKLKELANELCEGRIVFLLEGGYDLIGLSEGVADSFRALVGDDS--TDFGD 364
Query: 302 PAILYEEPSAKVKQAIERVKHIHSL 326
L +EP KV++ + VK +H +
Sbjct: 365 IPGLRDEPEEKVRKILNEVKAVHQI 389
>gi|145350128|ref|XP_001419469.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357494|ref|XP_001422953.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579701|gb|ABO97762.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583197|gb|ABP01312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 399
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 159/326 (48%), Positives = 211/326 (64%), Gaps = 9/326 (2%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 62
LT R E++E+ + PA+ + VHA+ Y +GLE + + + PTY T
Sbjct: 81 LTPAARPGEVLEITDVVPATKKALERVHAKNYCNGLELLCATRAPTNL----DTAPTYCT 136
Query: 63 ATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
++FQ+ + GA LVD V A + + P F LIRPPGHHA+P+G MGFC+ G
Sbjct: 137 PSSFQDVMLGVGAATRLVDEVIDRAKETKEKAPSAFGLIRPPGHHAVPRGAMGFCLVGTA 196
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
A AAR+AQ G K+V I D+DVHHGNGTND F DD + F+STH+DGSYPGTGKI ++G
Sbjct: 197 AAAARHAQ-LRGHKKVLIFDYDVHHGNGTNDIFRDDDSVLFISTHEDGSYPGTGKITDMG 255
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
GDG G+T+N+PLP GSGD A+ + E++VP A RF+PD I+VSAGYDAH DPLA L
Sbjct: 256 EGDGLGATINIPLPPGSGDKAVLSALEEIVVPAAARFQPDFIIVSAGYDAHWRDPLAGLT 315
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
F TGTY+ L +K+LA ++CG + VF LEGGY+L LS VADSFRA LG+ S ++
Sbjct: 316 FRTGTYHRLCTKLKELANEMCGGKIVFLLEGGYDLVGLSEGVADSFRALLGDAS--TDVG 373
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
L +EP KV+ + VK +H +
Sbjct: 374 EIPGLRDEPDDKVRNVLTEVKAMHQV 399
>gi|303275772|ref|XP_003057180.1| histone deacetylase [Micromonas pusilla CCMP1545]
gi|226461532|gb|EEH58825.1| histone deacetylase [Micromonas pusilla CCMP1545]
Length = 359
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/339 (50%), Positives = 218/339 (64%), Gaps = 19/339 (5%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLE-KAMDRASQQGIILIEGSGPTY 60
+T+ R E++ L++F+PA+ + I VH + +V GL+ A RA + PTY
Sbjct: 26 RITARDRPGELVLLEDFAPATAEQIMEVHTKNFVQGLDILAKTRAPCD-----VDTAPTY 80
Query: 61 ATATTFQESLAAAGAGIALVDSVAAS-KNRPD----------PPLGFALIRPPGHHAIPK 109
T ++ ++ GA IALVD+V AS K R GF L RPPGHHA P+
Sbjct: 81 VTPGSYDAAMRGCGAAIALVDAVVASAKARAGEEGGPENGGLAATGFGLCRPPGHHATPR 140
Query: 110 GPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS 169
MGFC+FG V+ AAR+AQRAHGL+RV I DFDVHHGNGTND F DDPD+ F+STH+DGS
Sbjct: 141 AAMGFCLFGTVSAAARHAQRAHGLQRVLIFDFDVHHGNGTNDIFRDDPDVLFVSTHEDGS 200
Query: 170 YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
YPGTGK+ +VG GDG G+++N+PLP GSGD A F E++ P A RFKPD++LVSAGYD
Sbjct: 201 YPGTGKLSDVGDGDGAGASINIPLPPGSGDAAALAAFDEIVAPAALRFKPDIVLVSAGYD 260
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
AH D LA L F TGTY+ L+ IK LA +LCG +CVF LEGGY+L LS V DSFR
Sbjct: 261 AHWRDALAGLNFRTGTYHRLSTRIKALANELCGGKCVFLLEGGYDLVGLSEGVVDSFRGL 320
Query: 290 LGEPSKASEFDNPAI--LYEEPSAKVKQAIERVKHIHSL 326
LG+ S A+ L +EP KV+ + K +H L
Sbjct: 321 LGDASGEPGGRAEAVPGLGDEPEDKVRAVLREAKALHQL 359
>gi|412990781|emb|CCO18153.1| histone deacetylase superfamily [Bathycoccus prasinos]
Length = 393
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 159/336 (47%), Positives = 224/336 (66%), Gaps = 23/336 (6%)
Query: 1 MELTSEF-----RGSEIIELKNFSPASVDDIA--SVHARAYVSGLE-KAMDRASQQGIIL 52
+E SEF + I+ L+N A+V+D+ +H++ Y+ LE A +A Q
Sbjct: 70 LENDSEFFLERKKDQSIVLLENPPLATVEDLVPLDIHSQNYMKSLEFLAKTKAPCQ---- 125
Query: 53 IEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPM 112
I+ S TY T ++F+ +LA+ GA ALVD+V K + GFAL+RPPGHHA+ KGPM
Sbjct: 126 IDAS--TYMTPSSFEAALASIGASNALVDAVLKGKTK----TGFALVRPPGHHAVVKGPM 179
Query: 113 GFCVFGNVAIAARYAQRAH--GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY 170
GFC+F A A RYAQ + +K+V + DFDVHHGNGTND F DP + F+STH+DGS+
Sbjct: 180 GFCLFNTAAAAVRYAQTQYPNDIKKVLVYDFDVHHGNGTNDIFAKDPTVLFVSTHEDGSF 239
Query: 171 PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
PGTGKI ++G+ +GEG+ +N+PLP G+G+ ++ F V+ P A+RF+PD I+VSAGYDA
Sbjct: 240 PGTGKISDIGQDEGEGTNINVPLPTGAGEKSVLEAFDLVVEPAARRFQPDFIVVSAGYDA 299
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
H DPLA+L F + TY+ L++ +K+L++DLC + VF LEGGY+L L VA+SF A +
Sbjct: 300 HWRDPLANLNFRSRTYHYLSSRLKKLSEDLCDGKIVFLLEGGYDLTGLPEGVAESFAALV 359
Query: 291 GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
GE K+ E +P L+EEP K K+ I+ VK +H L
Sbjct: 360 GE--KSLEQKDPG-LFEEPFEKAKKVIQEVKSVHQL 392
>gi|384248416|gb|EIE21900.1| Arginase/deacetylase [Coccomyxa subellipsoidea C-169]
Length = 381
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 201/330 (60%), Gaps = 13/330 (3%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP--- 58
LT EI+EL+ +PAS D+ VH +++ + +KA++ A ++ + P
Sbjct: 57 LTPAKHSHEIVELQGINPASETDLELVHTTEHITKMRQKALEEAP---CVVADFEEPADN 113
Query: 59 -TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
TY T T+++++L G + LVD VAA+ GF LIRPPGHHA P+GFC+F
Sbjct: 114 VTYMTKTSYEDALKGIGIAVTLVDQVAAAGKDGKGTKGFGLIRPPGHHATTDAPIGFCLF 173
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKID 177
NVAIAAR+AQ GLK+V I+DFDVHHGNGT D FY+DP + F+ HQ +PG+G++D
Sbjct: 174 NNVAIAARHAQERCGLKKVLIVDFDVHHGNGTQDIFYEDPSVLFIDVHQLDVWPGSGQVD 233
Query: 178 EVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
E G+G G+ T+N+PLP SGD +I P A+RF PD+IL+SAG+DAH DPL
Sbjct: 234 ETGKGAGQKGTINVPLPIASGDEVAGNCLKRIIAPAARRFAPDIILISAGFDAHWRDPLE 293
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS-KA 296
L F + TY+ L + I+ LA +LCG R V LEGGY++ LS V ++F+A L P
Sbjct: 294 QLNFQSATYHKLVSGIRDLADELCGGRLVVLLEGGYSMQGLSEGVCETFQALLKRPPLHP 353
Query: 297 SEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
+ D P+ EP + A++ V +H L
Sbjct: 354 HDADVPS----EPLQAAQLALDDVVSLHGL 379
>gi|307110667|gb|EFN58903.1| hypothetical protein CHLNCDRAFT_140841 [Chlorella variabilis]
Length = 385
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 158/323 (48%), Positives = 205/323 (63%), Gaps = 21/323 (6%)
Query: 8 RGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
R ++++L F A + VH YV+GL++ D+ + G + PTY T TT
Sbjct: 80 RTDQVVQLTGFGGAERAALQLVHGEGYVAGLQRVSDKCADSGTTVEVEWAPTYVTGTTSS 139
Query: 68 ESLAAAGAGIALVDSV-AASKNRPDP---PLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
++ AAGA IALVD V AAS+ + DP P GFA+ RPPGHH +P+ MGFC+FGNVA+A
Sbjct: 140 DACLAAGAAIALVDHVVAASQQQHDPGAVPAGFAVCRPPGHHCLPREAMGFCIFGNVAVA 199
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
AR+AQ+ HGL+R F F DPD+ F+S+HQ G YP TGK+ EVG G+
Sbjct: 200 ARHAQKQHGLQRAF---------------FESDPDVLFISSHQGGIYPSTGKLGEVGTGE 244
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
GEG+T+NLPLPG SG AM F EV+ P A+RF+PD+ILVSAGYDAH DPLA LQF +
Sbjct: 245 GEGATINLPLPGDSGHEAMLAAFDEVVAPAARRFRPDIILVSAGYDAHWRDPLAGLQFRS 304
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA 303
T++ L A K LA +L G R V LEGGY+L +L SVA++F LGE A +FD P
Sbjct: 305 ATFHELGARAKALADELSGGRLVMLLEGGYDLKALGESVANTFLGVLGE-GPADKFD-PV 362
Query: 304 ILYEEPSAKVKQAIERVKHIHSL 326
+L EEP KV+ + + IH L
Sbjct: 363 LLREEPLEKVQAVLLEARRIHEL 385
>gi|255088105|ref|XP_002505975.1| histone deacetylase [Micromonas sp. RCC299]
gi|226521246|gb|ACO67233.1| histone deacetylase [Micromonas sp. RCC299]
Length = 214
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 128/218 (58%), Positives = 158/218 (72%), Gaps = 7/218 (3%)
Query: 112 MGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP 171
MGFC+FG VA AAR+AQRA G+ RV I DFDVHHGNGTND F DDP + F+STH+DGS+P
Sbjct: 1 MGFCLFGTVAAAARHAQRARGMARVMIFDFDVHHGNGTNDIFRDDPSVLFVSTHEDGSFP 60
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
GTGK+ + G GDG G+T+N+PLP GSGD A F E++ P A RF PD++LVSAGYDAH
Sbjct: 61 GTGKMSDAGEGDGVGATINVPLPPGSGDAAALAAFDEIVAPAAARFAPDIVLVSAGYDAH 120
Query: 232 VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
DPLA L F TGTY+ L+A +K LA +LCG RCVF LEGGY+L L VADSFRA LG
Sbjct: 121 WRDPLAGLSFRTGTYWRLSARVKALADELCGGRCVFLLEGGYDLTGLGEGVADSFRALLG 180
Query: 292 EPSKASEFDNP---AILYEEPSAKVKQAIERVKHIHSL 326
+ S ++P A L +EP+ KV++ + K +H L
Sbjct: 181 DGSG----EDPGAIAGLTDEPTEKVRRVLAEAKAMHQL 214
>gi|298244138|ref|ZP_06967944.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
gi|297551619|gb|EFH85484.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
Length = 386
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/338 (38%), Positives = 197/338 (58%), Gaps = 24/338 (7%)
Query: 1 MELTSEFRGSEIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG- 57
M+L + E +L P A+VD++A+VH R Y+ +E A +A++ IE SG
Sbjct: 31 MQLLQALKWFERDDLVQLQPRAATVDELATVHEREYIQEVEAASKKAAE-----IEASGG 85
Query: 58 --------PTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPK 109
TY +A T++ +L AAGA + +D++ + + + L+RPPGHHA+ +
Sbjct: 86 RNTQFFATDTYVSAKTYEAALKAAGAPLTAIDALLKGEIKN----AYCLVRPPGHHAVAE 141
Query: 110 GPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS 169
MGFC+F NVA+AARYA HGL+RV IID+DVHHGNGT + FY+DP + + S HQ
Sbjct: 142 SAMGFCIFNNVAVAARYALEKHGLERVMIIDYDVHHGNGTQEMFYNDPRVLYFSVHQAPF 201
Query: 170 YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
YPGTG E+G G+G G+T+N+PLP +G ++F +V+VP RF P LILVSAG+D
Sbjct: 202 YPGTGASTELGEGEGLGTTINVPLPARTGFHVYDSIFRQVMVPAMDRFDPQLILVSAGFD 261
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
AH DP+ + +T +Y L I + A+ +C R + EGGY++++L V+ S
Sbjct: 262 AHWDDPIGDMYLSTSAFYQLNRVILEYAERICDGRVIMVQEGGYSISALENCVSTSINQL 321
Query: 290 LGEPSKASEFD-NPAILYEEPSAKVKQAIERVKHIHSL 326
+G + + P + Y+ + I ++ IH+L
Sbjct: 322 MGGEAAIDDLGPAPDMTYQ---INIDVLISELRRIHNL 356
>gi|383825469|ref|ZP_09980618.1| histone deacetylase superfamily protein [Mycobacterium xenopi
RIVM700367]
gi|383334761|gb|EID13196.1| histone deacetylase superfamily protein [Mycobacterium xenopi
RIVM700367]
Length = 343
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 129/306 (42%), Positives = 179/306 (58%), Gaps = 16/306 (5%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
D + +VH Y+ L + D I TYA + +AG IA D+
Sbjct: 52 TDAVLAVHTADYLDMLRRINDTPRT-----IHLDPDTYAGPDALTIARLSAGGVIAATDA 106
Query: 83 V--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
V A+ N G A IRPPGHHA+P MGFC+ GNVAIAAR+AQ +G++RV ++D
Sbjct: 107 VLGGAADN------GLAAIRPPGHHAMPDRAMGFCLLGNVAIAARHAQNRYGIQRVLVVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT YDDP + ++STHQ YPGTG ++VG G G+G T+N+PLP GSGD+
Sbjct: 161 YDVHHGNGTEAMLYDDPSVLYISTHQYPFYPGTGAANDVGTGRGQGYTINIPLPAGSGDS 220
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
VF +++ P A+RF P+LILVS G+DA+ DPLA+++ T Y LA + +A+
Sbjct: 221 NYAMVFDQIVWPAAERFAPELILVSVGFDAYWADPLAAMRLTLNGYSRLAEEVIGMARRW 280
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERV 320
C + VF LEGGY+L++L Y VA+ R L EP P+ P + + R+
Sbjct: 281 CAGKIVFALEGGYDLDALRYGVANVARLLLDEPPVDPPGTRPS---PRPEPDIDALVARL 337
Query: 321 KHIHSL 326
K +H+L
Sbjct: 338 KQLHAL 343
>gi|116753988|ref|YP_843106.1| histone deacetylase superfamily protein [Methanosaeta thermophila
PT]
gi|116665439|gb|ABK14466.1| histone deacetylase superfamily [Methanosaeta thermophila PT]
Length = 344
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 136/301 (45%), Positives = 179/301 (59%), Gaps = 13/301 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PAS+D I +VH+R Y+ + +R G + I+ T + ++ +L AAG A
Sbjct: 53 PASLDKIEAVHSRRYIEQVRSICERGG--GRLDID----TVLSKDSYDVALMAAGGVCAG 106
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V +PDP FAL+RPPGHHA P MGFCVF NVAI ARYAQ + GLK+V I+
Sbjct: 107 VDHVM---KKPDPV--FALVRPPGHHATPHRGMGFCVFNNVAIGARYAQ-SLGLKKVLIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
D+DVHHGNGT FY+D + + STHQ YPGTG++ EVG G G+G T+N+PLP G D
Sbjct: 161 DWDVHHGNGTQAIFYEDNSVLYFSTHQHPHYPGTGRVTEVGDGKGKGFTVNVPLPPGIDD 220
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+ V+ E++VP A F+P+++ VSAG+D H +DPL ++ T + LA +K +A
Sbjct: 221 SGYLAVYKEILVPVADEFRPEIVFVSAGFDPHQMDPLGGMRLTENGFGALAGLVKDIADR 280
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE-PSKASEFDNPAILYEEPSAKVKQAIE 318
G R V LEGGY L SLS SV RAF GE P D P E V++A
Sbjct: 281 HAGGRIVAALEGGYRLESLSESVVSVLRAFQGEVPDVMPLKDAPLTRRIEEVRSVQKAYW 340
Query: 319 R 319
R
Sbjct: 341 R 341
>gi|148657296|ref|YP_001277501.1| histone deacetylase superfamily protein [Roseiflexus sp. RS-1]
gi|148569406|gb|ABQ91551.1| histone deacetylase superfamily [Roseiflexus sp. RS-1]
Length = 344
Score = 241 bits (616), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/268 (45%), Positives = 161/268 (60%), Gaps = 8/268 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TY T+ ++ +L AAG +A+VD+V + + GFAL+RPPGHHA MGFC+F
Sbjct: 82 TYTTSASWDAALMAAGTTLAVVDAVVSGSAQN----GFALVRPPGHHATRAESMGFCLFN 137
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVAIAAR+A G+ RV I+DFDVHHGNGT D FYDD +FF STH YPGTG E
Sbjct: 138 NVAIAARHAIDHLGVTRVAIVDFDVHHGNGTQDIFYDDDRVFFCSTHASPLYPGTGAERE 197
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
+G G G G+T+NLPLP G GD +F +V++P +R++PDLILVSAGYDAH DPL
Sbjct: 198 IGSGRGRGTTMNLPLPHGVGDAGFARLFDDVVIPALRRYRPDLILVSAGYDAHWADPLGP 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L + Y L +K+ A+++C R LEGGYNL +L+ SV + +
Sbjct: 258 LTLSVAGYAALTRRLKETAEEVCNGRIALVLEGGYNLKALAASVLACLEVLANDDTVVDP 317
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIHSL 326
F P+ EP + I R+ H L
Sbjct: 318 F-GPS---NEPEPDISALIARMHQNHPL 341
>gi|386001263|ref|YP_005919562.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
gi|357209319|gb|AET63939.1| Histone deacetylase family protein [Methanosaeta harundinacea 6Ac]
Length = 340
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/313 (40%), Positives = 184/313 (58%), Gaps = 20/313 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+EL PA+++++ +VH+ Y+ + +R G + ++ T + +++ +L A
Sbjct: 41 LELVTPRPATLEEVRAVHSPGYIDQVRTISERGG--GYLDLD----TVVSRRSYEAALMA 94
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG I ++ V FAL+RPPGHHA+P MGFC+F NVAI AR+AQR G
Sbjct: 95 AGGVITGIERVNDGLEN-----AFALVRPPGHHALPNRGMGFCIFNNVAIGARFAQRM-G 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
++RV I+D+DVHHGNGT+ FYDD + + STHQ YPGTG++ E+G EG T+N+P
Sbjct: 149 MERVLIVDWDVHHGNGTSAIFYDDRSVMYFSTHQFPHYPGTGRVKELGMDGAEGFTVNVP 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G+GD+ F E++ P A F PD++LVSAG D H DPL+ + T G + +AA
Sbjct: 209 LPWGTGDSGYFAAFEEILKPLALEFDPDIVLVSAGQDPHQADPLSGMNLTCGAFGYMAAA 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K++A CG R V LEGGYNL++L+ S+ R F GE +P + E +
Sbjct: 269 VKEVADRCCGGRLVAALEGGYNLSALAESIVAVLRGFSGE--------DPGRIDGEEDPR 320
Query: 313 VKQAIERVKHIHS 325
+ IE VK S
Sbjct: 321 AAERIEEVKRAMS 333
>gi|189220417|ref|YP_001941057.1| deacetylase [Methylacidiphilum infernorum V4]
gi|189187275|gb|ACD84460.1| Deacetylase family enzyme [Methylacidiphilum infernorum V4]
Length = 314
Score = 237 bits (604), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 162/267 (60%), Gaps = 9/267 (3%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I VH Y+ + R +Q+G +++ G T+A +++ +L A GA + VD V +
Sbjct: 57 IQRVHTPQYIERV-----RKTQKGPMVLLDGGDTFAYGPSYEVALLAVGAALNAVDKVMS 111
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ + F +RPPGHHA+ MGFC+F VAIAARYA HGLK+VFI+D+DVHH
Sbjct: 112 KEIKN----AFCFVRPPGHHALANAAMGFCLFNTVAIAARYALEKHGLKKVFILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D FY+DP +F+ S HQ YPGTGK E+G+ +G G TLNL +P G+ D+
Sbjct: 168 GNGTQDIFYEDPQVFYASLHQFPHYPGTGKSTEIGKNEGLGYTLNLCMPRGASDSHYEKA 227
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F E I+P + FKPD+IL+SAG+DAH DPL + T + + IK+ A+ C R
Sbjct: 228 FDEKIIPAIESFKPDMILISAGFDAHKDDPLGEIYLTEQGFEKMTRLIKEAAERHCQGRM 287
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ LEGGYN+ SL S+ +A L +
Sbjct: 288 ISVLEGGYNIESLYKSIKSHLQALLAD 314
>gi|383761811|ref|YP_005440793.1| putative deacetylase [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381382079|dbj|BAL98895.1| putative deacetylase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 334
Score = 236 bits (603), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 193/326 (59%), Gaps = 13/326 (3%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
MEL +E + + +PA ++ I +VH YV L+ R + G ++ TY
Sbjct: 1 MELLAEEGLLDKLVTVPSTPAPLEAILAVHTPQYVERLQ----RIAHNGGGYLDPD--TY 54
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ +++ +L AAG + LVD+V + GFAL+RPPGHHA+ MGFC+F N
Sbjct: 55 VNSDSYEAALRAAGGVLNLVDAVLWRQADN----GFALVRPPGHHALSYQGMGFCLFANA 110
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQR HG++RV IIDFDVHHGNGT D F+ DP + F STHQ YPGTG E+G
Sbjct: 111 AIAARWAQRHHGVERVLIIDFDVHHGNGTQDIFFTDPSVLFFSTHQYPHYPGTGSATELG 170
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G+T+N PLP GD +F V+ P A+RF+P LIL+SAG+DAH LDPLAS+
Sbjct: 171 MEKAYGATVNAPLPPHVGDKGYLEIFQRVLAPVARRFRPQLILLSAGFDAHWLDPLASMG 230
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
+ Y L + LA +LC R + LEGGY+L L++SV +FR GEPS S+
Sbjct: 231 LSITGYAALVNEVMALADELCDGRLICVLEGGYHLQVLAHSVLTTFRILRGEPSPVSDPF 290
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
P E P + Q I +++ +H++
Sbjct: 291 GPPPGDERP---IHQLIGQLRALHNI 313
>gi|268317499|ref|YP_003291218.1| histone deacetylase superfamily protein [Rhodothermus marinus DSM
4252]
gi|262335033|gb|ACY48830.1| histone deacetylase superfamily [Rhodothermus marinus DSM 4252]
Length = 343
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/316 (39%), Positives = 188/316 (59%), Gaps = 19/316 (6%)
Query: 15 LKNFSPASVD-DIAS-VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
L++ P +VD D+A VH R Y+ L++A+ RA + TY + +L A
Sbjct: 42 LQHVEPLAVDLDVARLVHRRTYLERLQQALHRAPTRL------DPDTYVQPESLTVALEA 95
Query: 73 AGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
G +A+ +V + N GFA IRPPGHHA P+ MGFC+ NVAIA R+AQ+
Sbjct: 96 VGTLLAVTRAVLDGHADN------GFAAIRPPGHHATPERAMGFCLLSNVAIAVRWAQQT 149
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
G++RV I+DFDVHHGNGT + FY+DP++ F+S HQ YPGTG+++E+G G G G+T+N
Sbjct: 150 FGVERVAIVDFDVHHGNGTQEVFYEDPNVLFISVHQFPHYPGTGRMEEIGEGRGRGTTVN 209
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP +GD VF ++ P +RF+P+++ VSAGYDAH DPL+++Q T + L
Sbjct: 210 VPLPPFTGDAGYLEVFRRLLGPIVRRFRPEVLFVSAGYDAHWRDPLSAMQLTVAGFAQLV 269
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
+ + A C +R + LEGGY+ +L+ SV D+ L +P +E ++P
Sbjct: 270 YELMEWADAYCDNRLIAALEGGYDAEALAASV-DATVVRLLDP--VAEIEDPIGPSPHEP 326
Query: 311 AKVKQAIERVKHIHSL 326
A V+ I ++ +H +
Sbjct: 327 ADVRDLIYELRLLHKV 342
>gi|384917228|ref|ZP_10017357.1| Deacetylase family enzyme [Methylacidiphilum fumariolicum SolV]
gi|384525376|emb|CCG93230.1| Deacetylase family enzyme [Methylacidiphilum fumariolicum SolV]
Length = 314
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 162/271 (59%), Gaps = 9/271 (3%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
SPAS+D + SVH YV ++K +Q +++ G TYA +F +L A GA +
Sbjct: 50 SPASLDWVLSVHTPEYVEKVKK-----TQIVPMVLLDWGDTYAHGPSFDVALLAVGAALE 104
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD V + + F L+RPPGHHA+P MGFC+F V IAARYA + +G+KR+ I
Sbjct: 105 AVDKVITKQIKN----AFCLVRPPGHHALPNSAMGFCIFNTVGIAARYAIKNYGIKRILI 160
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+D+DVHHGNGT D FY+DP ++F+S HQ YPGTGK ++G+G GEG T+N+ + G+
Sbjct: 161 LDWDVHHGNGTQDIFYEDPQVYFISLHQFPYYPGTGKASDIGKGAGEGYTMNICMHRGAT 220
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D FH ++P ++KP++I +SAG+DAH DPL + T Y + +K A+
Sbjct: 221 DKEYVEAFHTKVLPAIDKYKPEIIFISAGFDAHKDDPLGEICLTEQGYETMTQLLKNAAQ 280
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
C + + LEGGYN SL S+ +A
Sbjct: 281 KHCEGKIISVLEGGYNTESLYNSIKSHLKAL 311
>gi|322370186|ref|ZP_08044748.1| histone deacetylase superfamily protein [Haladaptatus
paucihalophilus DX253]
gi|320550522|gb|EFW92174.1| histone deacetylase superfamily protein [Haladaptatus
paucihalophilus DX253]
Length = 341
Score = 231 bits (589), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/317 (41%), Positives = 181/317 (57%), Gaps = 27/317 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E PA+ ++ +VH YV+ + +G G T A A T+
Sbjct: 38 VEYVESPPATEAEVTAVHDGGYVTEFRE----------FCEDGGGNWDPDTVAVAATWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A +++ R P FAL RPPGHHA+ MGFC F N A+AAR
Sbjct: 88 ALESAGLAEWAAKAALSGEDGRSTP---FALGRPPGHHAVEDDAMGFCFFNNAAVAARSV 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+RV I+D+DVHHGNGT D FY D D+F++S H+DG YPGTG+IDE G GDGEG+
Sbjct: 145 IDEGEAERVAILDWDVHHGNGTQDIFYGDDDVFYVSIHEDGLYPGTGEIDESGEGDGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
TLN+PLP GSGD R+ F +++ P F PDL+LVSAG+DAH DP++ ++ +T Y
Sbjct: 205 TLNVPLPAGSGDPEYRSAFDDLVAPSLLDFDPDLVLVSAGFDAHRHDPISRMRVSTEGYG 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
ML A +++LA D G+ F LEGGY L++LS VA F G P + E
Sbjct: 265 MLTARVRELA-DEAGAALGFVLEGGYGLDTLSDGVAMVHEVFDGM--------EPVVPDE 315
Query: 308 EPSAKVKQAIERVKHIH 324
E S +V++ I ++ H
Sbjct: 316 EASEEVRELIAEIRDAH 332
>gi|345302783|ref|YP_004824685.1| histone deacetylase superfamily [Rhodothermus marinus
SG0.5JP17-172]
gi|345112016|gb|AEN72848.1| histone deacetylase superfamily [Rhodothermus marinus
SG0.5JP17-172]
Length = 343
Score = 230 bits (587), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 117/272 (43%), Positives = 169/272 (62%), Gaps = 16/272 (5%)
Query: 15 LKNFSPASVD-DIAS-VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
L++ P +VD D+A VH R Y+ L++A+ RA + TY + +L A
Sbjct: 42 LQHVEPLAVDLDVARLVHRRTYLERLQQALHRAPTRL------DPDTYVQPESLTVALEA 95
Query: 73 AGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
G +A+ +V + N GFA IRPPGHHA P+ MGFC+ NVAIA R+AQ+
Sbjct: 96 VGTLLAVTRAVLDGHADN------GFAAIRPPGHHATPERAMGFCLLSNVAIAVRWAQQT 149
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
G++RV I+DFDVHHGNGT + FY+DP++ F+S HQ YPGTG+++E+G G G G+T+N
Sbjct: 150 FGVERVAIVDFDVHHGNGTQEVFYEDPNVLFISVHQFPHYPGTGRMEEIGEGRGRGATVN 209
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP +GD VF ++ P +RF+P+++ VSAGYDAH DPL+++Q T + L
Sbjct: 210 VPLPPFTGDAGYLEVFRRLLGPIVRRFRPEVLFVSAGYDAHWRDPLSAMQLTVAGFAQLV 269
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ + A C +R V LEGGY+ +L+ SV
Sbjct: 270 YELMEWADACCDNRLVAALEGGYDAETLAASV 301
>gi|52352410|gb|AAU43699.1| acetoin utilization protein [uncultured archaeon GZfos26D8]
Length = 351
Score = 229 bits (585), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 130/310 (41%), Positives = 173/310 (55%), Gaps = 20/310 (6%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+ AS + + VHA Y+ +E AM R + T A T++ +L AAG I
Sbjct: 52 TKASKEQLRYVHAPEYIKEVE-AMCRRGGGAL-----DPDTPLCADTYEIALLAAGGVIK 105
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD V N FALIRPPGHHA P MGFC+F N+AIAA + +R +G+ RV I
Sbjct: 106 AVDEVMDESNSLKHV--FALIRPPGHHATPNKGMGFCIFNNIAIAAEHLKREYGINRVLI 163
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT F+DD + + STHQ YPGTG IDEVG G+GEG T+N PLP G+
Sbjct: 164 ADWDVHHGNGTQRMFFDDASVLYFSTHQYPHYPGTGWIDEVGTGEGEGFTVNAPLPAGTD 223
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D + ++VP A F+PD +LVS G+DAH DPLAS+ T+ + + IK +A+
Sbjct: 224 DDSYLYALSNILVPIAMEFRPDFVLVSVGFDAHAADPLASMNVTSRGFGRFTSLIKDIAE 283
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS----KASEFDNPAILYEEPSAKVK 314
R V LEGGYNLN+++ S F + L + S K SE S +V+
Sbjct: 284 KNSHGRIVMALEGGYNLNAIAESALSVFNSLLSDESELRVKESEI--------RASEQVR 335
Query: 315 QAIERVKHIH 324
+E VK +
Sbjct: 336 IRVEEVKEVQ 345
>gi|52548847|gb|AAU82696.1| acetoin utilization protein [uncultured archaeon GZfos19A5]
Length = 351
Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/314 (40%), Positives = 172/314 (54%), Gaps = 28/314 (8%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQESLAAAG 74
+ AS + + SVHA Y+ +E R G G T A T++ ++ AAG
Sbjct: 52 TKASKEQLRSVHAPEYIKEVEAICRR----------GGGALDPDTPLCADTYEIAMLAAG 101
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
VD V N FALIRPPGHHA P MGFC+F N+AIAA + +R +G+
Sbjct: 102 GVTKAVDEVMDESNSLKHV--FALIRPPGHHATPNKGMGFCIFNNIAIAAEHLKREYGIN 159
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
RV I D+DVHHGNGT + F+DD + + STHQ YPGTG IDEVG G+GEG T+N PLP
Sbjct: 160 RVLIADWDVHHGNGTQEVFFDDASVLYFSTHQYPHYPGTGWIDEVGTGEGEGFTVNAPLP 219
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G+ D + ++VP A F+PD +LVS G+DAH DPLAS+ T+ + + +K
Sbjct: 220 AGTDDDSYLYALSNILVPIAMEFRPDFVLVSVGFDAHAADPLASMNVTSRGFGRFTSLLK 279
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS----KASEFDNPAILYEEPS 310
+A R V LEGGYNLN+++ S F + L + S K SE S
Sbjct: 280 DIAGKNSHGRIVMALEGGYNLNAIAESALSVFNSLLSDESELRVKESEI--------RAS 331
Query: 311 AKVKQAIERVKHIH 324
+V+ +E VK +
Sbjct: 332 ERVRIRVEEVKEVQ 345
>gi|269928981|ref|YP_003321302.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
gi|269788338|gb|ACZ40480.1| Histone deacetylase [Sphaerobacter thermophilus DSM 20745]
Length = 375
Score = 227 bits (579), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 131/315 (41%), Positives = 176/315 (55%), Gaps = 24/315 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPT----YATATTFQESLAAAGA 75
PA+ +D+ + H AYV + + I G G T A +++ +L AAG
Sbjct: 69 PATEEDVTAYHTPAYVQRVRE----------ICAAGGGDTGEGAPAAPDSYEIALLAAGG 118
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
+A VD+V + R AL+RPPGHHA+ MGFC+FGNVAIAA +A+R HG++R
Sbjct: 119 VMAAVDAVMTGQVR----QCLALVRPPGHHAMADRGMGFCIFGNVAIAAHHARRRHGVER 174
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLP 194
+ I+D+DVHHGNGT DAFY DP + F+S HQDG Y PG G +++ G G G G T+N+PLP
Sbjct: 175 ILIVDWDVHHGNGTQDAFYADPGVLFVSIHQDGLYPPGWGAVEDTGTGPGAGYTVNIPLP 234
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
GSGD A F VI P A RF+P+L++VSAG DA DPL + +T Y + A ++
Sbjct: 235 PGSGDAAYLAAFTRVIAPIAARFRPELVIVSAGQDASASDPLGRMCLSTEAYRRMTAVMR 294
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL-----YEEP 309
+A R V LEGGY+ Y LGE + E NP + E
Sbjct: 295 DIAASSADGRLVVALEGGYSEIYAPYCTLAIAEELLGERTGIEEPLNPERVAAWRTSREV 354
Query: 310 SAKVKQAIERVKHIH 324
S +Q IERV +H
Sbjct: 355 SHDQEQVIERVIAVH 369
>gi|309792427|ref|ZP_07686893.1| histone deacetylase superfamily [Oscillochloris trichoides DG-6]
gi|308225537|gb|EFO79299.1| histone deacetylase superfamily [Oscillochloris trichoides DG6]
Length = 349
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/271 (46%), Positives = 164/271 (60%), Gaps = 9/271 (3%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
G TY T ++ +L AAGA + VD VA +++ P FAL+RPPGHHA P MGFC+
Sbjct: 84 GDTYLTYDSWDAALYAAGAAMGAVD-VALARH---PNNAFALVRPPGHHATPNRAMGFCL 139
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
NVA+AAR+A +GL+RV I+D+DVHHGNGT DAFYD+P + F+STH YPGTG +
Sbjct: 140 INNVAVAARHALNRYGLRRVAIVDYDVHHGNGTQDAFYDEPRVLFISTHAAPFYPGTGAM 199
Query: 177 DEVGR-GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
EVG G G+TLN+PLP G GD VF E++VP +RF P+L+LVSAGYD+H DP
Sbjct: 200 AEVGTPGPAAGTTLNIPLPFGVGDAGYAQVFDELVVPALRRFHPELLLVSAGYDSHWKDP 259
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
L + +T Y L A + LA++LC R F LEGGY+L +L + R LG
Sbjct: 260 LGPMTLSTSGYAHLTARLLDLAQELCQGRIAFILEGGYSLEALGACTIATMRLLLGREPG 319
Query: 296 ASEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
P + P + IE ++ H L
Sbjct: 320 PDLLGVP----QTPGTSPRPQIEMIRQRHPL 346
>gi|225180858|ref|ZP_03734306.1| histone deacetylase superfamily [Dethiobacter alkaliphilus AHT 1]
gi|225168339|gb|EEG77142.1| histone deacetylase superfamily [Dethiobacter alkaliphilus AHT 1]
Length = 318
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/292 (40%), Positives = 171/292 (58%), Gaps = 19/292 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PASVD++A VH R ++ + K + Q TY T ++ L +AG +
Sbjct: 24 PASVDEVAKVHTRQHIDYVHKLCQQHKPQL------DPDTYLTPESYDVGLLSAGGALTA 77
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+ +V R + + F+ RPPGHHA P MGFC+F N+AIAAR+AQ GL R+ I+
Sbjct: 78 MRAVM----RGNLDVAFSFGRPPGHHAEPHRAMGFCLFNNMAIAARHAQEEFGLSRIMIL 133
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
D+DVHHGNGT AFY DP + F+S HQ +PGTG + E G G GEG +N+PLP G GD
Sbjct: 134 DWDVHHGNGTQKAFYHDPGVLFVSPHQSPLFPGTGHLKEKGEGAGEGYNVNIPLPPGCGD 193
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
VF E+I P A RF+P+L++VSAG D++ DP+AS+ + + M+A + +Q+A++
Sbjct: 194 EVYSQVFTEIIRPLADRFRPELLMVSAGQDSYHNDPVASMNLSFAGFAMMARHARQIAEE 253
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-------EPSKASE--FDNP 302
C + V LEGGY+L L+ +V G EP+ +E +D+P
Sbjct: 254 YCDGKVVLTLEGGYHLGGLAEAVVTILSELSGWDRPLNHEPAPPAEPIYDDP 305
>gi|330507266|ref|YP_004383694.1| histone deacetylase family protein [Methanosaeta concilii GP6]
gi|328928074|gb|AEB67876.1| histone deacetylase family protein [Methanosaeta concilii GP6]
Length = 339
Score = 223 bits (569), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 180/314 (57%), Gaps = 24/314 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
IE PA+++ + S+H R Y+ ++ +R G + I+ T + +F +L A
Sbjct: 43 IECITPKPATIEQVESIHGRRYIDQVKAICERGG--GHLDID----TILSKDSFDAALMA 96
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA VD+V FAL+RPPGHHA+P MGFCVF NVAIAAR+AQ +
Sbjct: 97 AGGAIAAVDAVIEGHRG-----AFALVRPPGHHAMPNRGMGFCVFNNVAIAARHAQ-SRD 150
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L++V I+D+DVHHGNGTN FY D + + STHQ YPGTG++++VG EG+ +N+P
Sbjct: 151 LEKVLIVDWDVHHGNGTNAIFYSDRSVLYFSTHQFPHYPGTGRMNDVGEDGAEGTNVNVP 210
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G+GD + E++ P A F PD++LVSAG D H DPL + T + +A
Sbjct: 211 LPSGTGDEGYLMAYREILKPIAIEFSPDIVLVSAGQDPHKDDPLGGMGLTASGFAAIAGV 270
Query: 253 IKQLAKDLCGS-RCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSA 311
+K++A D+C + R LEGGYNL + + ++ RAF G+ FD
Sbjct: 271 VKEVA-DICSNGRVAAVLEGGYNLFAQAEAIVAQIRAFQGDVPDIHGFD----------P 319
Query: 312 KVKQAIERVKHIHS 325
KV + I+ +K+I
Sbjct: 320 KVARRIDEIKNIQK 333
>gi|221632213|ref|YP_002521434.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
gi|221156465|gb|ACM05592.1| histone deacetylase family protein [Thermomicrobium roseum DSM
5159]
Length = 319
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/289 (42%), Positives = 172/289 (59%), Gaps = 13/289 (4%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+E T +IE PA + IA +H RAY+ L + A++ G L T
Sbjct: 36 LERTGRLDNRPVIEP---DPADEETIALIHDRAYIVELREF---AARGGGWL---DADTI 86
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ +F+ + A GA + V+SV + + R FALIRPPGHHA P+ MGFC+F N+
Sbjct: 87 VSPRSFEVARLAVGAVVQAVESVLSGQAR----RVFALIRPPGHHAEPERGMGFCLFNNI 142
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
A+AA+YA +GL+R+ IID+DVHHGNGT AFY +FF+S HQ YPGTG+ +E+G
Sbjct: 143 AVAAQYALERYGLRRIAIIDWDVHHGNGTQAAFYRTDRVFFVSLHQWPLYPGTGRAEEIG 202
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G G G TLN+PL GS D F I P ++P+L++VSAGYDAH DPLA++
Sbjct: 203 EGPGRGYTLNIPLAPGSDDQVYLAAFANEIEPRLAAYRPELVMVSAGYDAHYADPLAAMA 262
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
T + +A+ ++ +A+ C R V LEGGYNL++L+ SVA + A
Sbjct: 263 VTEHGFAAMASQVRAIAEVWCDGRLVLALEGGYNLSALASSVAATLDAL 311
>gi|392411099|ref|YP_006447706.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390624235|gb|AFM25442.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 354
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/283 (43%), Positives = 169/283 (59%), Gaps = 14/283 (4%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
+L SE +E+ N AS+++IA+ H YV+ + + A + L T
Sbjct: 37 QLESELN---FVEIPN-REASLEEIATNHDPRYVN---QIVTTAGRSNTFL---DPDTCT 86
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
A +++ + A G LVD+V + R GFA IRPPGHHA + MGFC+F N+A
Sbjct: 87 CAHSWEAASKAVGGLFNLVDAVIEGRVRN----GFAFIRPPGHHAERRRAMGFCLFNNIA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
+AARYA H L RV IID+D+HHGNGT +AFY++ ++ F+S HQ YPGTG I EVG+
Sbjct: 143 LAARYAISRHKLSRVAIIDWDLHHGNGTQNAFYEEEEVLFISVHQYPHYPGTGGIREVGQ 202
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G GEG T+N+PL G+GD TVFH +I P + +KP+LILVSAG+DAH DPL +
Sbjct: 203 GRGEGHTINIPLAAGAGDDEYLTVFHLLIAPVLEMYKPELILVSAGFDAHERDPLGGMAV 262
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVAD 284
T Y + + LA+ R + LEGGYNL +L+ SV +
Sbjct: 263 TEKGYSQMLQILMHLAELYSSGRLILTLEGGYNLTALTNSVKE 305
>gi|196229464|ref|ZP_03128329.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
gi|196226696|gb|EDY21201.1| histone deacetylase superfamily [Chthoniobacter flavus Ellin428]
Length = 313
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 159/281 (56%), Gaps = 11/281 (3%)
Query: 14 ELKNFSPASV--DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+L P SV +D+ VH R Y+ E+ + + Q +G T ++ +
Sbjct: 41 KLTPIEPRSVTSEDLELVHERDYLRLAEREIRAGASQ-----LSTGDTSVCEASWDAARL 95
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG +A VD+V K F RPPGHHA MGFCV N+AIAAR+AQR H
Sbjct: 96 AAGGAMAAVDAVMEGK----VANAFCAGRPPGHHASTDRGMGFCVLNNIAIAARHAQRRH 151
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
G++RV I+D+DVHHGNGT D FY+D +FF STHQ YPGTG E G G+G G+TLN
Sbjct: 152 GIERVLIVDWDVHHGNGTQDIFYEDGSVFFFSTHQSPWYPGTGHARETGAGEGRGTTLNC 211
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLPGGSG + F+E ++P ++F+P +LVSAG+D+ DPL T G + L
Sbjct: 212 PLPGGSGHREIFVAFNEQLLPAMEKFQPQFVLVSAGFDSRGGDPLGDFLLTDGDFADLTK 271
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
++ +A R V LEGGY+LN L+ +V R + E
Sbjct: 272 IVRGIADKHAKGRVVSLLEGGYSLNGLANAVVAHVRELMTE 312
>gi|156742869|ref|YP_001432998.1| histone deacetylase superfamily protein [Roseiflexus castenholzii
DSM 13941]
gi|156234197|gb|ABU58980.1| histone deacetylase superfamily [Roseiflexus castenholzii DSM
13941]
Length = 345
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/307 (41%), Positives = 174/307 (56%), Gaps = 13/307 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ D + +VH+ + + + + +R I+ TY T+ ++ +L AAG +A+
Sbjct: 49 PATEDQLLAVHSPSMIELVRWSANRPHSW----IDHD--TYTTSASWDAALMAAGTAVAV 102
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V++V R GFAL+RPPGHHA P MGFC+F NVA+AARYA + RV I+
Sbjct: 103 VEAVVGGSARN----GFALVRPPGHHATPTESMGFCLFNNVAVAARYAIDHLSIGRVAIV 158
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT D FY D +FF STH YPGTG ++G G G G+TLNLPLP G GD
Sbjct: 159 DFDVHHGNGTQDIFYTDDRVFFCSTHASPLYPGTGAERDIGSGKGHGTTLNLPLPHGVGD 218
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+F +V++P +R++PDLILVSAGYD H DPL L + Y L + + A++
Sbjct: 219 AGFARLFDDVVIPAIRRYRPDLILVSAGYDGHWADPLGPLTLSVAGYAALTRRLMEAAEE 278
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIER 319
+C R V LEGGY+L +L+ S + S + PA E V I R
Sbjct: 279 VCRGRMVLVLEGGYHLRALAASAMACLEVLTNKNSIVVDPLGPA---GESEPDVSALIAR 335
Query: 320 VKHIHSL 326
++ H L
Sbjct: 336 MRQNHPL 342
>gi|269836949|ref|YP_003319177.1| histone deacetylase superfamily protein [Sphaerobacter thermophilus
DSM 20745]
gi|269786212|gb|ACZ38355.1| histone deacetylase superfamily [Sphaerobacter thermophilus DSM
20745]
Length = 321
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/282 (44%), Positives = 162/282 (57%), Gaps = 12/282 (4%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
PA+ +DIA VH Y+ +E A G L TY + T++ ++ AAGA I
Sbjct: 50 EPATPEDIALVHDPEYIRFIEHI---AHAGGAYL---DSDTYVSPLTYETAMLAAGAAIQ 103
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD V P F RPPGHHA+ + MGFC+F N+A+AAR+A GL+RV I
Sbjct: 104 AVDYVLDGAA----PRVFVFPRPPGHHALRRQGMGFCIFNNIAVAARHALERRGLRRVAI 159
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID+DVHHGNGT +AFYD ++ F S HQ +PGTG DE G G+ T+NLPLP GS
Sbjct: 160 IDWDVHHGNGTQEAFYDTDEVLFFSVHQWPLFPGTGHRDEEGVAYGQSYTVNLPLPPGSD 219
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D VF +VI P + PDLILVSAG+DAH DPLA ++ T +Y +A +++ A
Sbjct: 220 DADYARVFDDVIGPRLIEYAPDLILVSAGFDAHRDDPLALMEVTERGFYGIARRVREWAD 279
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAF--LGEPSKASE 298
L R V LEGGYN +L SV + RA L P + +E
Sbjct: 280 QLSEGRLVLLLEGGYNQRALVRSVEATIRALDALPAPEECAE 321
>gi|52549274|gb|AAU83123.1| acetoin utilization protein [uncultured archaeon GZfos26F9]
Length = 351
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 125/310 (40%), Positives = 168/310 (54%), Gaps = 20/310 (6%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+ AS + + VHA Y+ +E AM R + T T++ +L A G
Sbjct: 52 TKASKEQLRYVHAPEYIEEVE-AMCRRGGGAL-----DPDTPLCEATYEIALLATGGVTK 105
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D V N FALIRPPGHHA P MGFC+F N+AIA + +R +G+ RV I
Sbjct: 106 AGDEVMDESNSLKHV--FALIRPPGHHATPNKGMGFCIFNNIAIATEHLKREYGINRVLI 163
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT F+D + + STHQ YPGTG IDEVG+G+GEG T+N+PLP G+
Sbjct: 164 ADWDVHHGNGTQRMFFDGASVLYFSTHQYPHYPGTGWIDEVGKGEGEGFTVNVPLPAGTD 223
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D + ++VP A F PD +LVS G+DAH DPLAS+ T+ + + IK +A
Sbjct: 224 DDGYLYALNNILVPIAMEFSPDFVLVSIGFDAHAADPLASMNVTSRGFGRFKSLIKDIAG 283
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS----KASEFDNPAILYEEPSAKVK 314
R V LEGGYNLN+++ S F + L + S K SE SA+V+
Sbjct: 284 KNSHGRIVMALEGGYNLNAIAESALSVFNSLLSDESELKVKESEI--------RASARVR 335
Query: 315 QAIERVKHIH 324
+E VK +
Sbjct: 336 IRVEEVKEVQ 345
>gi|159474564|ref|XP_001695395.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158275878|gb|EDP01653.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 177
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 128/175 (73%)
Query: 112 MGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP 171
MGF VF +A+AARYA+ HG++RV I+DFDVHHGNGT + FYDDP+ ++STHQ G +P
Sbjct: 1 MGFGVFNTIAVAARYARERHGVERVLIVDFDVHHGNGTQEVFYDDPNTLYISTHQAGLWP 60
Query: 172 GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
TGK EVG G G G+T+N+PLPGGSGD AM + V++P A+RF+P L+LVSAGYDAH
Sbjct: 61 YTGKAKEVGAGAGRGATINIPLPGGSGDQAMARAWSRVVLPAAERFRPQLVLVSAGYDAH 120
Query: 232 VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSF 286
DPLA++Q T GTY+ + A + +L+K G+ LEGGY+ SL+ SVA S
Sbjct: 121 WRDPLAAMQLTAGTYHWMCAELAELSKRCSGTVLALVLEGGYHAPSLAESVAASL 175
>gi|308273423|emb|CBX30025.1| hypothetical protein N47_D28340 [uncultured Desulfobacterium sp.]
Length = 360
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 166/277 (59%), Gaps = 14/277 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ +H Y+S + R+ ++++ TY + +++ ++ AAG + L+
Sbjct: 61 ATREELGYIHTAEYISRVASTKTRSK----VMLDPD--TYTSPGSWEAAILAAGGVLELI 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ K GFA +RPPGHHA MGFC+F N+AI A+YA + L R+ IID
Sbjct: 115 DNLMEKKIDN----GFAFLRPPGHHAEADRAMGFCLFNNIAIGAKYAIEKYNLDRILIID 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+D+HHGNGT +FY+DP + + STHQ YPGTG ++E+G G G+G T+N+PL G GD
Sbjct: 171 WDIHHGNGTQRSFYNDPQVLYFSTHQYPYYPGTGGVNELGEGKGKGFTINIPLSSGVGDD 230
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+F E++ P A FKP LILVSAG+D ++ DPL ++ T + LA I +LA +
Sbjct: 231 EYAGIFMEILKPVAFEFKPQLILVSAGFDIYIDDPLGGMEITPEGFARLAKIILELADTI 290
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
C + +F LEGGY+L L DS +A L E S S
Sbjct: 291 CEGKVLFILEGGYSLKGLH----DSVKAVLLELSGES 323
>gi|448417796|ref|ZP_21579601.1| deacetylase [Halosarcina pallida JCM 14848]
gi|445677369|gb|ELZ29871.1| deacetylase [Halosarcina pallida JCM 14848]
Length = 338
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/320 (39%), Positives = 174/320 (54%), Gaps = 29/320 (9%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG-----PTYATATTFQE 68
E + S A+ +D+ASVH YV+ + + EG G T A+ T+
Sbjct: 39 EYVDASSATDEDVASVHDDDYVAEIRE-----------FCEGGGGNWDPDTVASEDTWDA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+LA+AG + + D P FA+ RPPGHHA+ MGFC N A+AA+
Sbjct: 88 ALASAGLSQWGARAAVEGADARDTP--FAIGRPPGHHAVEDDAMGFCFVNNAAVAAQTVI 145
Query: 129 RAHGL--KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
A L +RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG++DE+G GDGEG
Sbjct: 146 EADDLDVERVAIFDWDVHHGNGTQDIFYDRGDVFYASVHEDGLYPGTGEVDELGAGDGEG 205
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+TLN PL G+GD +V+ P +RF PDL +VSAG+DAH DP++ ++ +T Y
Sbjct: 206 ATLNAPLAAGAGDADYHLFVEDVLRPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGY 265
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY 306
+ ++ +A D+ + F LEGGY L++LS VA F G +P L
Sbjct: 266 AQMTDGVRSIADDV-DAGLAFVLEGGYGLDTLSEGVAIVHETFDGR--------SPLELE 316
Query: 307 EEPSAKVKQAIERVKHIHSL 326
E P K +E ++ H L
Sbjct: 317 EAPDEKTVSLVEELRDAHGL 336
>gi|406898250|gb|EKD41915.1| histone deacetylase family protein [uncultured bacterium]
Length = 315
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/269 (42%), Positives = 157/269 (58%), Gaps = 10/269 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS+D+IA VH + ++ + K D SQ +G P +T + + AAG + V
Sbjct: 57 ASIDEIAWVHTKDHIDEVLKC-DGISQH---FFDGDTPAGPHST--EAAFLAAGGLMKAV 110
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
V K + F RPPGHHA MGFC+F NVAIAA+Y + KR+ I+D
Sbjct: 111 QEVEEGKIKN----AFVFPRPPGHHAESDHAMGFCIFNNVAIAAQYLIKQKNKKRIVIMD 166
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT FY+ D+F+LSTH+ YPGTG DE G G+G G+TLN+PL + D
Sbjct: 167 FDVHHGNGTQHFFYERSDVFYLSTHRFPFYPGTGSGDETGVGEGMGTTLNVPLDAYADDE 226
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F I+P +KPD ILVSAGYDAH+ DPL ++ T ++M++ ++ +LAK
Sbjct: 227 DYRASFENQIIPAIDHYKPDFILVSAGYDAHIRDPLGGMKVTKEGFFMMSQSLSELAKKH 286
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
CG + V+ LEGGY+L L V+ + +
Sbjct: 287 CGGKIVYVLEGGYDLKGLQEGVSATLESL 315
>gi|302038518|ref|YP_003798840.1| putative deacetylase, histone deacetylase family [Candidatus
Nitrospira defluvii]
gi|300606582|emb|CBK42915.1| putative Deacetylase, histone deacetylase family [Candidatus
Nitrospira defluvii]
Length = 314
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 166/281 (59%), Gaps = 11/281 (3%)
Query: 12 IIELKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
+ L P + +D I VH YV+ L + +A G I ++ T + + + +
Sbjct: 41 LASLTRIDPRTAEDEWITLVHQPEYVAMLNR---QAPTHGRISLDAD--TSMSPGSLRAA 95
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
AAG +A VD++ + + F +RPPGHHA MGFC+F NVAIAARYAQ+
Sbjct: 96 YLAAGGALAGVDAIMTGRVQH----AFCAVRPPGHHAEADRAMGFCLFNNVAIAARYAQK 151
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
+G++RV I+D+DVHHGNGT +F DP + F STHQ YPGTG+ E GRG GEG T+
Sbjct: 152 RYGVQRVLIVDWDVHHGNGTQHSFESDPSVLFFSTHQYPHYPGTGRAGECGRGAGEGLTI 211
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+P+ G GD R VF +V++P A FKP+ +++SAG+DAH DPLAS+ T Y L
Sbjct: 212 NVPMEAGEGDDEYRAVFQKVLLPAADAFKPEFVIISAGFDAHRDDPLASMGLTEDGYADL 271
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ +A+ C R + LEGGYNL +L+ SV +A +
Sbjct: 272 TNIVAGIARQHCQGRLLSSLEGGYNLTALAASVERHLQALV 312
>gi|398336031|ref|ZP_10520736.1| histone deacetylase [Leptospira kmetyi serovar Malaysia str.
Bejo-Iso9]
Length = 352
Score = 213 bits (543), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 166/269 (61%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
+LK+ P +I H+R ++ +E D +++G T T ++ + +AA
Sbjct: 68 KLKDVDPTFYKEI---HSRNHLQRIE---DSKNKRGYF----DSDTPFTENSWLAAYSAA 117
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L D++ + K + GF+L+RPPGHHA MGFC+ NVAIAARY Q+ +G
Sbjct: 118 NSGITLADALISGKIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAIAARYLQK-NGF 172
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY DP++F+LS HQ YP TG +E+G GDG G+T N+P+
Sbjct: 173 KKIFIIDWDVHHGNGTQEIFYRDPNVFYLSIHQFPFYPMTGHSEEIGYGDGVGTTKNIPM 232
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
SGD + F E+++P + +P++IL+SAG+DAH DPL + TT + L+ +
Sbjct: 233 QTDSGDQSYIQKFKEIVIPTMEHVEPNIILISAGFDAHKEDPLGGMNITTNGFEQLSHIV 292
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ A +C + FLEGGYNL +L+ SV
Sbjct: 293 LESADKICQGNVLSFLEGGYNLKALAESV 321
>gi|418697320|ref|ZP_13258313.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
gi|409954822|gb|EKO13770.1| histone deacetylase family protein [Leptospira kirschneri str. H1]
Length = 278
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 165/269 (61%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 14 EMKKFPNEFLNEI---HSKNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 63
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L +S+ + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 64 NSGIILSESLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGY 118
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG + E G+G G G+T N+P+
Sbjct: 119 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLVTETGKGKGIGTTKNIPM 178
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
SG+ A F E++VP +RF PD++L+SAG+DAH DPL + TT + L I
Sbjct: 179 QANSGNQAYMQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNITTKGFEDLTRII 238
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ A +CG + + FLEGGY+L +LS SV
Sbjct: 239 LESADRICGGKVLSFLEGGYDLTALSESV 267
>gi|421107226|ref|ZP_15567781.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
gi|410007745|gb|EKO61431.1| histone deacetylase family protein [Leptospira kirschneri str. H2]
Length = 264
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 145/221 (65%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L +S+ + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 38 TEKSWISAYSAANSGIILSESLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 93
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q +G K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG + E G+
Sbjct: 94 ITARYLQN-NGYKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLVTETGK 152
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G G+T N+P+ SG+ A F E++VP +RF PD++L+SAG+DAH DPL +
Sbjct: 153 GKGIGTTKNIPMQANSGNQAYMQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNI 212
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L I + A +CG + + FLEGGY+L +LS SV
Sbjct: 213 TTKGFEDLTRIILESADRICGGKVLSFLEGGYDLTALSESV 253
>gi|169830473|ref|YP_001716455.1| histone deacetylase superfamily protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169637317|gb|ACA58823.1| histone deacetylase superfamily [Candidatus Desulforudis
audaxviator MP104C]
Length = 331
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 162/270 (60%), Gaps = 10/270 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++ VHA Y++ + +A +QG ++ T +++ ++ AAG + +
Sbjct: 72 ATEAEVERVHAAEYLADVREA----CRQGRRRLDPD--TAVCPASYEVAMWAAGGALTAL 125
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ V R D L AL+RPPGHHA+P MGFC+F NVA+AAR+A +GL+R+ ++D
Sbjct: 126 EVV--MDGRFDRAL--ALVRPPGHHALPARSMGFCLFNNVAVAARHALEVYGLERILVVD 181
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+D HHGNGT + FY+DP + F S H YPGTG D VGRG+G G +N+PLP +GD
Sbjct: 182 WDFHHGNGTEEIFYEDPRVLFFSIHSRYGYPGTGHADRVGRGEGAGFNINVPLPDSAGDA 241
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
F EV+VP A ++P+L++VSAG D + DPL L T Y LA ++++A+
Sbjct: 242 GCEAAFREVLVPAAGDYRPELVMVSAGQDGYYADPLGGLGLTPAGYARLAGLVREIAEAH 301
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
CG R V LEGGY+L L+ ++ A+L
Sbjct: 302 CGGRIVAALEGGYHLKGLAETLGVVLDAWL 331
>gi|254775778|ref|ZP_05217294.1| histone deacetylase superfamily protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 309
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 158/284 (55%), Gaps = 16/284 (5%)
Query: 9 GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
G + + + PA + VH+ YV LE A Q G + ++G G T +T++
Sbjct: 38 GFDALVRETAEPAELAATRYVHSNRYVDALEAAR---PQHGYVYLDG-GDTMMEPSTWET 93
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L GA + VD V A D F RPPGHHA + MGFC+F N++I AR+AQ
Sbjct: 94 ALRGVGATLQAVDRVLAG----DVQNAFVACRPPGHHAETERAMGFCLFNNISIGARHAQ 149
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
R HGL RV I+DFDVHHGNGT FY DP + + STHQ +PGTG E G G+
Sbjct: 150 RKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAAAETGVGN----I 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N PL G G +R F + IVP Q F P+LI+VSAG+DAH DPL SL TT +
Sbjct: 206 FNSPLAPGDGGAELRAAFTDRIVPALQAFSPELIIVSAGFDAHERDPLGSLTMTTDDFGW 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + + A+ LC R V LEGGY+L +L ADS A +GE
Sbjct: 266 VTRELMKSAEKLCDGRLVAVLEGGYDLQAL----ADSVTAHVGE 305
>gi|118464825|ref|YP_882515.1| histone deacetylase [Mycobacterium avium 104]
gi|118166112|gb|ABK67009.1| histone deacetylase superfamily protein [Mycobacterium avium 104]
Length = 309
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/284 (42%), Positives = 158/284 (55%), Gaps = 16/284 (5%)
Query: 9 GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
G + + + PA + VH+ YV LE A Q G + ++G G T +T++
Sbjct: 38 GFDALVRETAEPAELATTRYVHSNRYVDALEAAR---PQHGYVYLDG-GDTMMEPSTWET 93
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L GA + VD V A D F RPPGHHA + MGFC+F N++I AR+AQ
Sbjct: 94 ALRGVGATLQAVDRVLAG----DVQNAFVACRPPGHHAETERAMGFCLFNNISIGARHAQ 149
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
R HGL RV I+DFDVHHGNGT FY DP + + STHQ +PGTG E G G+
Sbjct: 150 RKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAAAETGVGN----I 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N PL G G +R F + IVP Q F P+LI+VSAG+DAH DPL SL TT +
Sbjct: 206 FNSPLAPGDGGPELRAAFTDRIVPALQAFSPELIIVSAGFDAHERDPLGSLTMTTDDFGW 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + + A+ LC R V LEGGY+L +L ADS A +GE
Sbjct: 266 VTRELMKSAEKLCDGRLVAVLEGGYDLQAL----ADSVTAHVGE 305
>gi|383620355|ref|ZP_09946761.1| histone deacetylase [Halobiforma lacisalsi AJ5]
gi|448695767|ref|ZP_21697516.1| histone deacetylase [Halobiforma lacisalsi AJ5]
gi|445784221|gb|EMA35038.1| histone deacetylase [Halobiforma lacisalsi AJ5]
Length = 348
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 175/321 (54%), Gaps = 27/321 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL-- 70
+E P VD+IASVH R+YV +E+ +G G T +E+
Sbjct: 38 VEYVEADPVDVDEIASVHDRSYVEEIEE----------FCAQGGGNWDPDTTAVEETWDA 87
Query: 71 ---AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+A A A+ ++ R P F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 IRCSAGQARWAVERALEGDDGRKTP---FSIGRPPGHHAVVDDAMGFCFVNNVAVAAQWA 144
Query: 128 QRA--HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+ + + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG+IDE G GDG+
Sbjct: 145 LESEDYDVDRVAIVDWDVHHGNGTQDIFYDREDVFFVSIHEKGLYPGTGEIDERGEGDGD 204
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+NLP+P G+ D F I + + PDL++VSAG+DAH DP++ ++ +T
Sbjct: 205 GTTMNLPMPAGTDDVDYLAAFDGPIGTALEEYGPDLVIVSAGFDAHRHDPISRIRLSTEA 264
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL 305
Y +L ++ L D G+ F LEGGY+L+ L+ SV+ F G + D
Sbjct: 265 YALLTDRLRGLT-DRVGAAFAFVLEGGYSLDVLADSVSIVHETFDGREPIEPDDD----- 318
Query: 306 YEEPSAKVKQAIERVKHIHSL 326
EE S + IE V H L
Sbjct: 319 -EEVSDGARTVIEDVIEEHGL 338
>gi|448476277|ref|ZP_21603441.1| histone deacetylase superfamily protein [Halorubrum aidingense JCM
13560]
gi|445815826|gb|EMA65745.1| histone deacetylase superfamily protein [Halorubrum aidingense JCM
13560]
Length = 334
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 176/319 (55%), Gaps = 27/319 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E + PA+ +++A+VH AYV LE +D +G G T A+ T+
Sbjct: 38 VEYTDADPAAREEVAAVHDEAYVDELETFVD----------DGGGSWDPDTVASEGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAG A A ++ + R P FA+ RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALTAAGLAQWAARSALDGANGRHTP---FAIGRPPGHHAVADDAMGFCFFNNAAVAAQTV 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+ + S H+ G YP TG +DE GRG GEG+
Sbjct: 145 LDDGDADRVAIFDWDVHHGNGTQDIFYDRGDVLYASIHEKGLYPDTGDLDETGRGAGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T+NLPL G+GD E + P RF PDL++VSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TVNLPLAAGAGDADYLQAIDEAVGPAIDRFDPDLVIVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
++ I+ +A D+ G+ + LEGGY L++L+ V+ + G P + E
Sbjct: 265 LMTDRIRTVADDV-GAATAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVEVDE 315
Query: 308 EPSAKVKQAIERVKHIHSL 326
+P+ K K ++ ++ + L
Sbjct: 316 DPNEKTKTLVDELRSLLEL 334
>gi|390565991|ref|ZP_10246535.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390170759|emb|CCF85878.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 318
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/271 (43%), Positives = 157/271 (57%), Gaps = 10/271 (3%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+PA+ DIA VH Y++ +E R + G L++ T + ++ +L A G+ I
Sbjct: 50 TPATAGDIALVHEPRYIAMVE----RIANSGGGLLDTD--TVVSPRSYDIALLAVGSAIR 103
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD V R FAL RPPGHHA+ MGFC+F N+AIAA++A GL+RV I
Sbjct: 104 SVDLVLGQDAR----RAFALPRPPGHHALQNRGMGFCLFNNIAIAAQHAIERKGLRRVAI 159
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
ID+DVHHGNGT FY+ +F+ S HQ +PGTG +E G G G G TLN+ LP GS
Sbjct: 160 IDWDVHHGNGTQAIFYETDRVFYASVHQWPLFPGTGSAEETGSGPGSGYTLNVALPPGSD 219
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D V E+I P ++PDLILVSAG+DAH DPLA++ T Y+ +AA ++ A
Sbjct: 220 DARYLWVLDEIIGPRVAAYQPDLILVSAGFDAHREDPLANMMVTEDGYFSIAARMRAWAD 279
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
L R V LEGGYN +L+ SV + R
Sbjct: 280 SLSDGRLVLILEGGYNQRALALSVEATIRGL 310
>gi|418686823|ref|ZP_13247987.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418741677|ref|ZP_13298051.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089968|ref|ZP_15550769.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410001231|gb|EKO51845.1| histone deacetylase family protein [Leptospira kirschneri str.
200802841]
gi|410738530|gb|EKQ83264.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410751125|gb|EKR08104.1| histone deacetylase family protein [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 278
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 164/269 (60%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 14 EMKKFPNEFLNEI---HSKNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 63
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L +S+ + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 64 NSGIILSESLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGY 118
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG I E G+G G G+T N+P+
Sbjct: 119 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLITETGKGKGIGTTKNIPM 178
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
S + A F E++VP +RF PD++L+SAG+DAH DPL + TT + L I
Sbjct: 179 QANSENQAYIQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNLTTKGFEDLTRII 238
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ A +CG + + FLEGGY+L +LS SV
Sbjct: 239 LESADRICGGKVLSFLEGGYDLTALSESV 267
>gi|407770448|ref|ZP_11117817.1| putative deacetylase [Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286471|gb|EKF11958.1| putative deacetylase [Thalassospira xiamenensis M-5 = DSM 17429]
Length = 309
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 160/270 (59%), Gaps = 12/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D I VH AYV + A+ ++ + + G TY + + + +L A G V
Sbjct: 50 ADLDLIKKVHDPAYVDRVMAAIPQSGYESL-----DGDTYVSPASGEAALRAVGGVCVAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V A R F +RPPGHHA MGFC+F NVA+ AR+A+ AHG+KRV ++D
Sbjct: 105 DAVLAGHERN----AFVGVRPPGHHAEYDRAMGFCLFNNVAVGARHARDAHGIKRVAVMD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D FY+DPD+F+ STHQ YPGTG DE G + + LN+ L G+G
Sbjct: 161 FDVHHGNGTQDLFYNDPDLFYCSTHQWPLYPGTGAPDERGCAN---NILNVGLSAGAGTA 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
M+ F + ++P FKP+L+++SAG+DAH DPLA L F + + ++ LA ++
Sbjct: 218 EMKHAFEQSVLPGIAAFKPELLIISAGFDAHRNDPLAGLSFIESDFAWITEHLLALAGEV 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
C +R V LEGGY+L SL+ SV R +
Sbjct: 278 CDNRVVSVLEGGYDLPSLASSVQAHVRTLM 307
>gi|126741027|ref|ZP_01756710.1| histone deacetylase family protein [Roseobacter sp. SK209-2-6]
gi|126717953|gb|EBA14672.1| histone deacetylase family protein [Roseobacter sp. SK209-2-6]
Length = 329
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 167/277 (60%), Gaps = 16/277 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DDI +H Y+SGL KA Q+G I+G TY + + + AAGA + V
Sbjct: 68 AAEDDILRIHPAGYLSGLRKAR---PQEGFAQIDGD--TYMSPGSIDAAFRAAGAVLKAV 122
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A D FA IRPPGHHA + MGFC+FGN A+AA++A HGL RV ++D
Sbjct: 123 DLVMAG----DAGNAFAAIRPPGHHAETETAMGFCLFGNAALAAKHALDHHGLSRVAVVD 178
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D + +P +++ Q +PGTG+ +E G D + LN+PL GSG
Sbjct: 179 FDVHHGNGTQDLLWAEPRALVVTSQQMPLWPGTGRPEEDGAHD---NILNIPLAPGSGRA 235
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
M+ + P + FKP+LI++SAG+DAH DPLASL ++TG + + A + +LA++L
Sbjct: 236 EMQAAYEGQAFPRLRAFKPELIIISAGFDAHQDDPLASLNWSTGDFAWITAELCKLAQEL 295
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
C R V LEGGY+LN+L+ + RA + E KA+
Sbjct: 296 CQGRIVSTLEGGYDLNALAAAT----RAHVEELIKAA 328
>gi|399575762|ref|ZP_10769520.1| histone deacetylase superfamily [Halogranum salarium B-1]
gi|399240030|gb|EJN60956.1| histone deacetylase superfamily [Halogranum salarium B-1]
Length = 337
Score = 210 bits (535), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 173/319 (54%), Gaps = 27/319 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E + PA+ + +++VHA YV + + G G T A T+
Sbjct: 38 VEYVDADPATEEGVSAVHADDYVEEVRE----------FCASGGGNWDPDTVACEETWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG + A +++ R P FAL RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALQSAGLSQWAAREALDGHDGRQTP---FALGRPPGHHAVGDDAMGFCFFNNAAVAAQDV 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+RV I D+DVHHGNGT D FYD D+F+ S H++G YPGTG DE G GDGEG+
Sbjct: 145 IDDGLAERVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEEGLYPGTGDADETGDGDGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T N+PLP G+GD E++ P RF PDL++VSAG+DAH DP++ ++ +T Y
Sbjct: 205 TQNIPLPAGAGDADYMLAIDELLTPALDRFDPDLLIVSAGFDAHRHDPISRMRVSTEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
++ ++++ + + + C F LEGGY L++LS VA F G P +
Sbjct: 265 LMTDRVREMCEQVDAALC-FVLEGGYGLDTLSEGVATVHETFDGR--------EPIAPDD 315
Query: 308 EPSAKVKQAIERVKHIHSL 326
EP K ++ I ++ H L
Sbjct: 316 EPGEKSEELIAELRSTHGL 334
>gi|387876580|ref|YP_006306884.1| histone deacetylase superfamily protein [Mycobacterium sp. MOTT36Y]
gi|386790038|gb|AFJ36157.1| histone deacetylase superfamily protein [Mycobacterium sp. MOTT36Y]
Length = 309
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 120/276 (43%), Positives = 154/276 (55%), Gaps = 16/276 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA + VH+ YV LE A + G + ++G G T +T++ +L GA +
Sbjct: 49 PAELAAARYVHSNRYVDALEAAR---PEHGYVYLDG-GDTMMEPSTWETALRGVGATLRA 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V A D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I+
Sbjct: 105 VDRVLAG----DVQNAFVACRPPGHHAESERAMGFCLFNNISIGARHAQRKHGLMRVAIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT FY DP + + STHQ +PGTG E G G+ N PL G G
Sbjct: 161 DFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAARETGVGN----IFNAPLAPGDGG 216
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F E I+P F P+LI+VSAG+DAH DPL SL TT + + + + A+
Sbjct: 217 AELRAAFAERILPALHAFSPELIIVSAGFDAHERDPLGSLTMTTDDFAWVTRELMKSAET 276
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
LC R V LEGGY+L +L ADS A +GE K
Sbjct: 277 LCDGRLVAVLEGGYDLQAL----ADSVTAHVGELVK 308
>gi|83949904|ref|ZP_00958637.1| histone deacetylase family protein [Roseovarius nubinhibens ISM]
gi|83837803|gb|EAP77099.1| histone deacetylase family protein [Roseovarius nubinhibens ISM]
Length = 312
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 159/274 (58%), Gaps = 12/274 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DDI VH ++++ L KA A +G I+G T+ + T + + AAG + V
Sbjct: 43 AAEDDILRVHPKSHIDRLRKA---APSEGWAQIDGD--TFLSPGTLEAAWRAAGGAVRAV 97
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A + R GF +RPPGHHA + PMGFC+FGNVA+AA +A HGL RV ++D
Sbjct: 98 DLVMAGEARN----GFVAMRPPGHHAERETPMGFCLFGNVAVAAMHALEHHGLGRVAVVD 153
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D +FF S+HQ +PG+G E G G G+ LNLPL G+G
Sbjct: 154 FDVHHGNGTQDLLEEDARVFFASSHQSPLWPGSGGAHETG---GHGNVLNLPLAPGTGGA 210
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A R + + + P + +P+ I VSAG+DAH DPLA+L + + + LA++L
Sbjct: 211 AFRKAWEDQVFPRLREHRPEFIFVSAGFDAHRDDPLANLDLIEADFAWVTERLCALAEEL 270
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
C R V LEGGY+L++L S A A + S
Sbjct: 271 CDGRLVSCLEGGYDLHALGRSAAAHVDALIAAAS 304
>gi|126727251|ref|ZP_01743087.1| histone deacetylase family protein [Rhodobacterales bacterium
HTCC2150]
gi|126703460|gb|EBA02557.1| histone deacetylase family protein [Rhodobacterales bacterium
HTCC2150]
Length = 308
Score = 210 bits (534), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 163/281 (58%), Gaps = 13/281 (4%)
Query: 15 LKNFSPASVDD-IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
L+ +P +DD + VH ++++S + A A + G + ++ T+ + + + ++ AA
Sbjct: 40 LREEAPLVLDDNLLKVHPQSHISAIRNA---APKDGWVSLDAD--THMSPGSLEAAMRAA 94
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G + VD V D F +RPPGHHA P+GFC FGNVA+AA++A HGL
Sbjct: 95 GGNVRAVDMVMNG----DVQNAFVAMRPPGHHAERTTPLGFCFFGNVALAAKHALGNHGL 150
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
KRV I+DFDVHHGNGT D DD IFF STHQ YPGTG E G + + +N+PL
Sbjct: 151 KRVAIVDFDVHHGNGTQDLVEDDARIFFASTHQSPLYPGTGAAHETGVNN---NVMNVPL 207
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
PGG+G R + ++P F P+LI+VSAG+DAH DPLA L FTT + + I
Sbjct: 208 PGGTGSIGFRRAMEQQVLPAVAAFDPELIIVSAGFDAHRADPLAGLDFTTEDFAWVTQKI 267
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+LA C R V LEGGY+L++L+ S A + + + +
Sbjct: 268 CELADTHCQGRLVSSLEGGYDLDALAESAAAHVKILMEQST 308
>gi|400536512|ref|ZP_10800046.1| histone deacetylase superfamily protein [Mycobacterium colombiense
CECT 3035]
gi|400329525|gb|EJO87024.1| histone deacetylase superfamily protein [Mycobacterium colombiense
CECT 3035]
Length = 309
Score = 210 bits (534), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/274 (43%), Positives = 151/274 (55%), Gaps = 16/274 (5%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
PA + VH+ YV LE A G + ++G G T +T++ +L GA +
Sbjct: 48 EPADLAATRYVHSNRYVDALEAAR---PDDGYVYLDG-GDTMMEPSTWEAALRGVGATLQ 103
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD V A D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I
Sbjct: 104 AVDRVLAG----DAQNAFVACRPPGHHAETERAMGFCLFNNISIGARHAQRKHGLMRVAI 159
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+DFDVHHGNGT FY DP + + STHQ +PGTG + E G G+ N PL G G
Sbjct: 160 VDFDVHHGNGTQQIFYTDPSVLYASTHQMPLFPGTGAVRETGVGN----IFNAPLAPGDG 215
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+R F + IVP Q F P+LI+VSAG+DAH DPL SL T + + + A+
Sbjct: 216 GAELRAAFQDRIVPALQAFSPELIIVSAGFDAHERDPLGSLTMTAADFAWVTRELMAAAE 275
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
LC R V LEGGY+L L+ DS A +GE
Sbjct: 276 KLCDGRLVAVLEGGYDLQGLT----DSVTAHVGE 305
>gi|398339945|ref|ZP_10524648.1| acetoin-histone deacetylase [Leptospira kirschneri serovar Bim str.
1051]
gi|421130519|ref|ZP_15590713.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
gi|410358218|gb|EKP05399.1| histone deacetylase family protein [Leptospira kirschneri str.
2008720114]
Length = 347
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 164/269 (60%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 83 EMKKFPNEFLNEI---HSKNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 132
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L +S+ + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 133 NSGIILSESLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGY 187
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG I E G+G G G+T N+P+
Sbjct: 188 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLITETGKGKGIGTTKNIPM 247
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
S + A F E++VP +RF PD++L+SAG+DAH DPL + TT + L I
Sbjct: 248 QANSENQAYIQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNVTTKGFEDLTRII 307
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ A +CG + + FLEGGY+L +LS SV
Sbjct: 308 LESADRICGGKVLSFLEGGYDLTALSESV 336
>gi|418677399|ref|ZP_13238675.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|400322347|gb|EJO70205.1| histone deacetylase family protein [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
Length = 347
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 164/269 (60%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 83 EMKKFPNEFLNEI---HSKNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 132
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L +S+ + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 133 NSGIILSESLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGY 187
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG I E G+G G G+T N+P+
Sbjct: 188 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLITETGKGKGIGTTKNIPM 247
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
S + A F E++VP +RF PD++L+SAG+DAH DPL + TT + L I
Sbjct: 248 QANSENQAYIQKFKEIVVPTMERFDPDIVLISAGFDAHKDDPLGGMNVTTKGFEDLTRII 307
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ A +CG + + FLEGGY+L +LS SV
Sbjct: 308 LESADRICGGKVLSFLEGGYDLTALSESV 336
>gi|219850430|ref|YP_002464863.1| histone deacetylase superfamily protein [Chloroflexus aggregans DSM
9485]
gi|219544689|gb|ACL26427.1| histone deacetylase superfamily [Chloroflexus aggregans DSM 9485]
Length = 352
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/234 (45%), Positives = 145/234 (61%), Gaps = 5/234 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TY TA ++ L AAGA IA+V+++A + GFAL+RPPGHHA MGFC+F
Sbjct: 82 TYVTADSWDVGLLAAGATIAMVEAIAEGRCHN----GFALVRPPGHHATDVRSMGFCLFN 137
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N+AIAAR + ++R+ I+DFDVHHGNGT D FY D + F STH YPGTG + E
Sbjct: 138 NIAIAARVLLDRYDIRRLAIVDFDVHHGNGTQDIFYRDGRVLFCSTHASPLYPGTGAVYE 197
Query: 179 VGRGD-GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
G G+TLN+PLP G+GD VF +VI P +F+P+++LVSAG+DAH DP+
Sbjct: 198 TGDPHMANGTTLNVPLPYGTGDEGYDRVFRQVIGPAIHQFQPEILLVSAGFDAHWSDPIG 257
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ + + L ++ A+ LC R F LEGGYN+ +L+ SV + R LG
Sbjct: 258 PMALSVHGFARLVQHLLTWAQTLCNGRIGFVLEGGYNIAALTASVIATLRLMLG 311
>gi|24213615|ref|NP_711096.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|386073219|ref|YP_005987536.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
gi|24194411|gb|AAN48114.1| histone deacetylase [Leptospira interrogans serovar Lai str. 56601]
gi|353457008|gb|AER01553.1| histone deacetylase [Leptospira interrogans serovar Lai str. IPAV]
Length = 313
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 143/221 (64%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L + + + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 87 TEKSWISAYSAANSGIILSEFLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q +G K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+
Sbjct: 143 ITARYLQN-NGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGK 201
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G G+T N+P+ SGD A F E+IVP +RF+PD++L+SAG+DAH DPL +
Sbjct: 202 GKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNI 261
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L I + A +C + + FLEGGYNL +LS SV
Sbjct: 262 TTKGFEDLTRIILESADKICSGKVLSFLEGGYNLAALSESV 302
>gi|159896687|ref|YP_001542934.1| histone deacetylase superfamily protein [Herpetosiphon aurantiacus
DSM 785]
gi|159889726|gb|ABX02806.1| histone deacetylase superfamily [Herpetosiphon aurantiacus DSM 785]
Length = 345
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/307 (40%), Positives = 179/307 (58%), Gaps = 16/307 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I +VH +++ L+ R +Q G TY + + + AAG I
Sbjct: 51 ATAAEIEAVHVPSHLPTLQ----RMAQFGDW---ADAETYILPDSVEIAQLAAGGAIVAT 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + ++ FAL+RPPGHHA MGFC+F N AIAA +AQR +GLKRV I+D
Sbjct: 104 DAVLSGRHANS----FALVRPPGHHATADQAMGFCLFNNAAIAAAFAQREYGLKRVAILD 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT D FY +PD+ ++STH +P +G E+G G G+TLNLPL +GD
Sbjct: 160 WDVHHGNGTQDIFYQNPDVLYISTHGWPLWPNSGHWKEMGANAGLGTTLNLPLRPLTGDM 219
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
VF + I P +RFKP+L+++SAGYDAH+ DPL +L +TG Y L++ + LA +
Sbjct: 220 GFHLVFEQAIAPAIRRFKPELLIISAGYDAHIYDPLGNLALSTGGYAQLSSIVYNLAAEC 279
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL-GEPSKASEFDNPAILYEEPSAKVKQAIER 319
C R V LEGGYNL +L+ S+ + + ++ G+P A F+ + P V IE
Sbjct: 280 CDGRLVGLLEGGYNLEALAQSLTATLQTWVSGQP--APIFNQE--VSHTPEPDVTWLIEH 335
Query: 320 VKHIHSL 326
++ H L
Sbjct: 336 LRREHPL 342
>gi|433646943|ref|YP_007291945.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium smegmatis JS623]
gi|433296720|gb|AGB22540.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium smegmatis JS623]
Length = 309
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/275 (42%), Positives = 155/275 (56%), Gaps = 16/275 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D VH+ YV GLE A G + ++G G T +T++ L GA + V
Sbjct: 50 ADLDTTRYVHSNRYVDGLESVRPDA---GYVYLDG-GDTMMEPSTWEVVLRGVGATVQAV 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + + F RPPGHHA + MGFC+F N++I AR+AQR HGL+RV I+D
Sbjct: 106 DKVCSGQVQN----AFVACRPPGHHAETERAMGFCLFNNISIGARHAQRHHGLERVAIVD 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT + FY DP + + STHQ +PGTG + E G G+ N PL G G
Sbjct: 162 FDVHHGNGTQEIFYSDPSVLYASTHQMPLFPGTGAVRETGVGN----IFNSPLAAGDGGA 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+R F + I+P F P+LI+VSAG+DAH DPL SLQ T + + I + A+
Sbjct: 218 ELREAFEDRILPALDAFSPELIIVSAGFDAHERDPLGSLQMTADDFAWVTRAIMESAEKN 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
C R V LEGGY+L L ADS A +GE K
Sbjct: 278 CDGRLVAVLEGGYDLVGL----ADSVSAHVGELMK 308
>gi|443306354|ref|ZP_21036142.1| histone deacetylase superfamily protein [Mycobacterium sp. H4Y]
gi|442767918|gb|ELR85912.1| histone deacetylase superfamily protein [Mycobacterium sp. H4Y]
Length = 309
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 154/276 (55%), Gaps = 16/276 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA + VH+ YV LE A + G + ++G G T +T++ +L GA +
Sbjct: 49 PAELAAARYVHSNRYVDALEAAR---PEHGYVYLDG-GDTMMEPSTWETALRGVGATLRA 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V A D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I+
Sbjct: 105 VDRVLAG----DVQNAFVACRPPGHHAESERAMGFCLFNNISIGARHAQRKHGLMRVAIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT FY DP + + STHQ +PGTG E G G+ N PL G G
Sbjct: 161 DFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAARETGVGN----IFNAPLAPGDGG 216
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F + I+P F P+LI+VSAG+DAH DPL SL TT + + + + A+
Sbjct: 217 AELRAAFADRILPALHAFSPELIIVSAGFDAHERDPLGSLTMTTDDFAWVTRELMKSAET 276
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
LC R V LEGGY+L +L ADS A +GE K
Sbjct: 277 LCDGRLVAVLEGGYDLQAL----ADSVTAHVGELVK 308
>gi|417750432|ref|ZP_12398794.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium avium subsp. paratuberculosis S397]
gi|336457999|gb|EGO36986.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mycobacterium avium subsp. paratuberculosis S397]
Length = 309
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/284 (42%), Positives = 157/284 (55%), Gaps = 16/284 (5%)
Query: 9 GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
G + + + PA + VH+ YV LE A Q G + ++G G T +T++
Sbjct: 38 GFDALVRETAEPAELAATRYVHSNRYVDALEAAR---PQHGYVYLDG-GDTMMEPSTWET 93
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L GA + VD V A D F RPPGHHA + MGFC+F N++I AR+AQ
Sbjct: 94 ALRGVGATLQAVDRVLAG----DVQNAFVACRPPGHHAETERAMGFCLFNNISIGARHAQ 149
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
R HGL RV I+DFDVHHGNGT FY DP + + STHQ +PGTG E G G+
Sbjct: 150 RKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAAAETGVGN----I 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N PL G G +R F + VP Q F P+LI+VSAG++AH DPL SL TT +
Sbjct: 206 FNSPLAPGDGGAELRAAFTDRFVPALQAFSPELIIVSAGFNAHERDPLGSLTMTTDDFGW 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + + A+ LC R V LEGGY+L +L ADS A +GE
Sbjct: 266 VTRELMKSAEKLCDGRLVAVLEGGYDLQAL----ADSVTAHVGE 305
>gi|448376673|ref|ZP_21559673.1| histone deacetylase [Halovivax asiaticus JCM 14624]
gi|445656409|gb|ELZ09243.1| histone deacetylase [Halovivax asiaticus JCM 14624]
Length = 336
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 122/297 (41%), Positives = 172/297 (57%), Gaps = 15/297 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG-AGIA 78
PASV+ I ++H AYV D E T A T+ +L +AG A A
Sbjct: 45 PASVETIEAIHDPAYVEEFRSFCDDGGG------EWDPDTSAVEATWDAALQSAGLACWA 98
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
+++A R F++ RPPGHHA+ MGFC F NVA+AA++A G RV I
Sbjct: 99 ADEALAGEVGRK---TSFSIGRPPGHHAVVDDAMGFCFFNNVAVAAQHAIDDGGADRVAI 155
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+D+DVHHGNGT D FY+ D+FF S H+DG YPGTG++DE G G GEG+T+N+P+P +
Sbjct: 156 VDWDVHHGNGTQDLFYNREDVFFASIHEDGLYPGTGEVDETGEGAGEGTTINVPMPDSAT 215
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D+A VF E++ P + F PDL+L+SAG+DAH DP++ ++ TT Y ++A + +A+
Sbjct: 216 DSAYLAVFDELLGPALRDFDPDLLLLSAGFDAHRHDPISRVRLTTEAYALMADRARSIAE 275
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG----EPSKASEFDNPAILYEEPSA 311
+ V LEGGY+L+ L+ SVA F G EP + A+L + SA
Sbjct: 276 TVDAGLAV-VLEGGYSLDVLADSVALVHETFDGREPIEPDDGIDESVDALLNDVASA 331
>gi|379762732|ref|YP_005349129.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-64]
gi|378810674|gb|AFC54808.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-64]
Length = 309
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 155/276 (56%), Gaps = 16/276 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA + VH+ YV LE A + G + ++G G T +T++ +L GA +
Sbjct: 49 PAELAAARYVHSNRYVDALEAAR---PEHGYVYLDG-GDTMMEPSTWETALRGVGATLRA 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V A D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I+
Sbjct: 105 VDRVLAG----DVQNAFVACRPPGHHAESERAMGFCLFNNISIGARHAQRKHGLMRVAIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT FY DP++ + STHQ +PGTG E G G+ N PL G G
Sbjct: 161 DFDVHHGNGTQQIFYSDPNVLYASTHQMPLFPGTGAARETGVGN----IFNAPLAPGDGG 216
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F + I+P F P+LI+VSAG+DAH DPL SL TT + + + + A+
Sbjct: 217 AELRAAFADRILPALHAFSPELIIVSAGFDAHERDPLGSLTMTTDDFAWVTRELMKSAEM 276
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
LC R V LEGGY+L +L ADS A +GE K
Sbjct: 277 LCDGRLVAVLEGGYDLQAL----ADSVTAHVGELVK 308
>gi|367469878|ref|ZP_09469603.1| Acetylspermidine deacetylase [Patulibacter sp. I11]
gi|365815054|gb|EHN10227.1| Acetylspermidine deacetylase [Patulibacter sp. I11]
Length = 342
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/297 (40%), Positives = 175/297 (58%), Gaps = 9/297 (3%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+E E R E + PA+V+ + +VH ++V + A+ G I + T
Sbjct: 26 IERELEARDWCGFEARESPPATVEQLQAVHPPSHVERIRALA--ATGGGAIDAD----TV 79
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+A +++ +L AAG IA+VD++ ++ P +L RPPGHH PMGFC+F N+
Sbjct: 80 VSAGSWEAALHAAGGAIAVVDALL-GEDPARPRRAASLHRPPGHHCETAQPMGFCLFNNI 138
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
A+AAR+A+ HGL+RV I+D+DVHHGNGT + F ++ F S H+ YPGTG E G
Sbjct: 139 AVAARHARDRHGLQRVLIVDWDVHHGNGTAEIFAGTDEVLFCSIHEHPLYPGTGLPSERG 198
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G GEG T+NLP+PGGSGD + +V++P A+ + P LILVSAGYDAH DPLA+ +
Sbjct: 199 HGAGEGFTVNLPVPGGSGDETWTAMVEQVVLPIARSYAPQLILVSAGYDAHEQDPLATCR 258
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
+ + +A ++ +LA +L LEGGY + +L+ SVA + G PS A+
Sbjct: 259 VSDEGFAAIAGSVDRLADEL-DVPLGLVLEGGYAVEALARSVAATLEVLAG-PSAAA 313
>gi|52550445|gb|AAU84294.1| acetoin utilization protein [uncultured archaeon GZfos9D1]
Length = 351
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/314 (40%), Positives = 174/314 (55%), Gaps = 28/314 (8%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQESLAAAG 74
+ AS + + VHA Y+ +E R G G T T++ +L AAG
Sbjct: 52 TKASKEQLRYVHAPEYIKEVEAICRR----------GGGALDPDTPLCEDTYEIALLAAG 101
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
I VD V N FALIRPPGHHA P MGFC+F N+AIAA + +R +G+
Sbjct: 102 GVIKAVDEVMDESNSLKHV--FALIRPPGHHATPNKGMGFCIFNNIAIAAEHLKREYGIN 159
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
RV I D+DVHHGNGT F+DD + + STHQ YPGTG I+EVG+G+GEG T+N+PLP
Sbjct: 160 RVLIADWDVHHGNGTQRMFFDDASVLYFSTHQYPHYPGTGWIEEVGKGEGEGFTVNVPLP 219
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G+ D + + ++VP A F+PD +LVS G+DAH DPLAS+ T+ + + IK
Sbjct: 220 AGTDDDSYLYALNNILVPIAMEFRPDFVLVSVGFDAHAADPLASMNVTSRGFGRFTSLIK 279
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS----KASEFDNPAILYEEPS 310
+A+ R V LEGGYNLN+++ S F + L + S K SE S
Sbjct: 280 DIAEKNGNGRVVMALEGGYNLNAIAESALSVFNSLLSDESELRVKESEI--------RAS 331
Query: 311 AKVKQAIERVKHIH 324
+V+ +E VK +
Sbjct: 332 EQVRIRVEEVKEVQ 345
>gi|418713784|ref|ZP_13274507.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
gi|410789775|gb|EKR83473.1| histone deacetylase family protein [Leptospira interrogans str. UI
08452]
Length = 313
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 162/269 (60%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 49 EMKKFPNEFLNEI---HSQNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 98
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L + + + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 99 NSGIILSEFLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGF 153
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+G G G+T N+P+
Sbjct: 154 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGKGKGIGTTKNIPM 213
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
SGD A F E+IVP +RF+PD++L+SAG+DAH DPL + TT + L I
Sbjct: 214 QVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRII 273
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ +C + + FLEGGYNL +LS SV
Sbjct: 274 LESVDKICSGKVLSFLEGGYNLAALSESV 302
>gi|163845938|ref|YP_001633982.1| histone deacetylase superfamily protein [Chloroflexus aurantiacus
J-10-fl]
gi|222523663|ref|YP_002568133.1| histone deacetylase superfamily protein [Chloroflexus sp. Y-400-fl]
gi|163667227|gb|ABY33593.1| histone deacetylase superfamily [Chloroflexus aurantiacus J-10-fl]
gi|222447542|gb|ACM51808.1| histone deacetylase superfamily [Chloroflexus sp. Y-400-fl]
Length = 352
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/309 (38%), Positives = 172/309 (55%), Gaps = 17/309 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ ++ +VH+ S L + AS G + TY TA ++ +L AAGA I +
Sbjct: 49 PATEAELLAVHSS---SMLHRVRQLASYGGGQI---DSDTYVTAESWDVALLAAGATICM 102
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+++ + + FAL+RPPGHHA MGFC+F N+A+AAR H L+R+ I+
Sbjct: 103 AEALVSGRCHN----AFALVRPPGHHATDIRSMGFCLFNNIAVAARVLLDRHHLRRIAIV 158
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG--RGDGEGSTLNLPLPGGS 197
DFDVHHGNGT D FY D + F S H YPGTG + E+G R G G+TLN+PLP G+
Sbjct: 159 DFDVHHGNGTQDIFYRDGRVLFCSIHAAPLYPGTGSLHEMGDPRTAG-GTTLNVPLPYGT 217
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
GD VF VI P +RF+P++ILVSAG+DAH DP+ + + + + ++ A
Sbjct: 218 GDHGYEQVFQRVIGPVLRRFQPEIILVSAGFDAHWSDPIGPMALSIQGFARIVQHLCDWA 277
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAI 317
+LC R F LEGGY+L +L+ V + R LG P+ + +P P ++ I
Sbjct: 278 DELCDGRIGFVLEGGYSLPALAAGVVTTLRLLLGMPAGS----DPMGKMNAPEPAIEHII 333
Query: 318 ERVKHIHSL 326
+ H L
Sbjct: 334 TSLYTYHPL 342
>gi|406031433|ref|YP_006730324.1| Histone deacetylase 14 [Mycobacterium indicus pranii MTCC 9506]
gi|405129980|gb|AFS15235.1| Histone deacetylase 14 [Mycobacterium indicus pranii MTCC 9506]
Length = 309
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 154/276 (55%), Gaps = 16/276 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA + VH+ YV LE A + G + ++G G T +T++ +L GA +
Sbjct: 49 PAELAATRYVHSNRYVDALEAAR---PEHGYVYLDG-GDTMMEPSTWETALRGVGATLRA 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V A D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I+
Sbjct: 105 VDRVLAG----DVQNAFVACRPPGHHAESERAMGFCLFNNISIGARHAQRKHGLMRVAIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT FY DP + + STHQ +PGTG E G G+ N PL G G
Sbjct: 161 DFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAARETGVGN----IFNAPLAPGDGG 216
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F + I+P F P+LI+VSAG+DAH DPL SL TT + + + + A+
Sbjct: 217 AELRAAFADRILPALHAFSPELIIVSAGFDAHERDPLGSLTMTTDDFAWVTRELMKSAEM 276
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
LC R V LEGGY+L +L ADS A +GE K
Sbjct: 277 LCDGRLVAVLEGGYDLQAL----ADSVTAHVGELVK 308
>gi|116328827|ref|YP_798547.1| histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116331736|ref|YP_801454.1| histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
gi|116121571|gb|ABJ79614.1| Histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. L550]
gi|116125425|gb|ABJ76696.1| Histone deacetylase [Leptospira borgpetersenii serovar Hardjo-bovis
str. JB197]
Length = 317
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 159/263 (60%), Gaps = 13/263 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
+H+ A++ +E++ ++G T T ++ + +AA +GI L D++ +
Sbjct: 61 IHSSAHLQKIERS---KGKRGYF----DSDTPFTEKSWIAAYSAANSGITLADALISGTI 113
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ GF+L+RPPGHHA MGFC+ NVAI ARY Q+ +G K++FIID+DVHHGNG
Sbjct: 114 KN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQK-NGFKKIFIIDWDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T + FY DP++F+LS HQ YP TG E G+ +G G+T N+P+ S + A F E
Sbjct: 169 TQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGKNEGSGTTKNIPMQANSDNQAYIQKFKE 228
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P + F+PD++L+SAG+DAH DPL + TT + L + + A +C + + F
Sbjct: 229 VVIPTMEHFEPDIVLISAGFDAHKEDPLGEMDITTKGFEDLTKIVLESADKICEGKVLSF 288
Query: 269 LEGGYNLNSLSYSV-ADSFRAFL 290
LEGGYNL +LS SV A F F
Sbjct: 289 LEGGYNLTALSESVEAQRFSIFF 311
>gi|379747895|ref|YP_005338716.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare ATCC 13950]
gi|379755200|ref|YP_005343872.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-02]
gi|378800259|gb|AFC44395.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare ATCC 13950]
gi|378805416|gb|AFC49551.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare MOTT-02]
Length = 309
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/276 (43%), Positives = 154/276 (55%), Gaps = 16/276 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA + VH+ YV LE A + G + ++G G T +T++ +L GA +
Sbjct: 49 PAELAAARYVHSNRYVDALEAAR---PEHGYVYLDG-GDTMMEPSTWETALRGVGATLRA 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V A D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I+
Sbjct: 105 VDRVLAG----DVQNAFVACRPPGHHAESERAMGFCLFNNISIGARHAQRKHGLMRVAIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT FY DP + + STHQ +PGTG E G G+ N PL G G
Sbjct: 161 DFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAARETGVGN----IFNAPLAPGDGG 216
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F + I+P F P+LI+VSAG+DAH DPL SL TT + + + + A+
Sbjct: 217 AELRAAFADRILPALHAFSPELIIVSAGFDAHERDPLGSLTMTTDDFAWVTRELMKSAEM 276
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
LC R V LEGGY+L +L ADS A +GE K
Sbjct: 277 LCDGRLVAVLEGGYDLQAL----ADSVTAHVGELVK 308
>gi|433639734|ref|YP_007285494.1| deacetylase, histone deacetylase/acetoin utilization protein
[Halovivax ruber XH-70]
gi|433291538|gb|AGB17361.1| deacetylase, histone deacetylase/acetoin utilization protein
[Halovivax ruber XH-70]
Length = 337
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 164/277 (59%), Gaps = 13/277 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG-AGIA 78
PA V+ I +VH AYV D E T A T+ +L +AG A A
Sbjct: 45 PAPVETIEAVHDPAYVEEFRSFCDDGGG------EWDPDTSAVEATWDAALQSAGLACWA 98
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA-QRAHGLKRVF 137
+++A R P F++ RPPGHHA+ MGFC F NVA+AA++A G RV
Sbjct: 99 ADEALAGEVGRKTP---FSIGRPPGHHAVADDAMGFCFFNNVAVAAQHAIDDDGGADRVA 155
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
I+D+DVHHGNGT D FYD D+FF S H+DG YPGTG++DE G G GEG+T+N+P+P +
Sbjct: 156 IVDWDVHHGNGTQDLFYDREDVFFASIHEDGLYPGTGEVDETGEGAGEGTTMNVPMPDSA 215
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D A VF E++ P + F PDL+L+SAG+DAH DP++ ++ TT Y ++A + +A
Sbjct: 216 TDAAYLAVFDELLGPALRDFDPDLLLLSAGFDAHRHDPISRVRLTTEAYALMADRARSIA 275
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
+ + V LEGGY+L+ L+ SVA F G EP
Sbjct: 276 ESVDAGLAV-VLEGGYSLDVLADSVALVHETFDGREP 311
>gi|417772111|ref|ZP_12420001.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|418680417|ref|ZP_13241666.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418707007|ref|ZP_13267844.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|400327775|gb|EJO80015.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|409946068|gb|EKN96082.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Pomona]
gi|410763358|gb|EKR34088.1| histone deacetylase family protein [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|455667658|gb|EMF32954.1| histone deacetylase family protein [Leptospira interrogans serovar
Pomona str. Fox 32256]
Length = 313
Score = 207 bits (528), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 163/269 (60%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 49 EMKKFPNEFLNEI---HSQNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 98
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L + + + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 99 NSGIILSEFLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGF 153
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+G G G+T N+P+
Sbjct: 154 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGKGKGIGTTKNIPM 213
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
SGD A F E+IVP +RF+PD++L+SAG+DAH DPL + TT + L I
Sbjct: 214 QVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRII 273
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ A +C + + FLEGGY+L +LS SV
Sbjct: 274 LESADKICSGKVLSFLEGGYDLAALSESV 302
>gi|302853628|ref|XP_002958328.1| hypothetical protein VOLCADRAFT_108078 [Volvox carteri f.
nagariensis]
gi|300256353|gb|EFJ40621.1| hypothetical protein VOLCADRAFT_108078 [Volvox carteri f.
nagariensis]
Length = 838
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 122/166 (73%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHH +P+ PMGF VF V++AA YA+ +G+ ++ I+DFDVHHGNGT + FYD
Sbjct: 254 FALVRPPGHHVLPRRPMGFGVFNTVSLAAWYARERYGIDKIAIVDFDVHHGNGTMEVFYD 313
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP ++STHQ G +P TGK + G G G G+TLN+PLPGGSGD AMR + ++++P +
Sbjct: 314 DPYTLYVSTHQAGLWPYTGKAHDTGTGAGRGATLNIPLPGGSGDQAMRLAWSQLVLPSLE 373
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
F+P L+LVSAGYDAH DPLA +Q T TY+ +++ + L++ C
Sbjct: 374 SFRPQLLLVSAGYDAHWRDPLAGMQLTCATYHRMSSELLALSRRCC 419
>gi|448457209|ref|ZP_21595704.1| histone deacetylase superfamily protein [Halorubrum lipolyticum DSM
21995]
gi|445810790|gb|EMA60805.1| histone deacetylase superfamily protein [Halorubrum lipolyticum DSM
21995]
Length = 334
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/310 (37%), Positives = 171/310 (55%), Gaps = 18/310 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA+ +++ +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEADPATREEVVAVHDAEYVDELEA----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+LA+AG S + D P FAL RPPGHHA+P MGFC F N A+AA+
Sbjct: 88 ALASAGLSQWAARSALDGADGRDTP--FALGRPPGHHAVPDDAMGFCFFNNAAVAAQTVL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
RV I D+DVHHGNGT D FY+ D+F+ S H++G YP TG +DE GR +GEG+T
Sbjct: 146 DDGAADRVAIFDWDVHHGNGTQDVFYERGDVFYASIHEEGLYPDTGALDETGRDEGEGTT 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+NLPL G+GD E + P +RF PDL++VSAG+DAH DP++ ++ ++ Y +
Sbjct: 206 VNLPLSAGAGDADYLYAIDEAVAPALERFDPDLVIVSAGFDAHRHDPISRMRVSSEGYAL 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
+ I+ + D+ G+ + LEGGY L++L+ V+ F E + D+P E
Sbjct: 266 MTDQIRSVTDDI-GAATAYVLEGGYGLDTLADGVSMVHETF-DERTPVGNDDDPDEKTES 323
Query: 309 PSAKVKQAIE 318
A++++ +E
Sbjct: 324 LVAELRELLE 333
>gi|45658561|ref|YP_002647.1| acetoin-histone deacetylase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|417761510|ref|ZP_12409519.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|417775766|ref|ZP_12423615.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|417784566|ref|ZP_12432272.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|418674690|ref|ZP_13235989.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|418701546|ref|ZP_13262471.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418729578|ref|ZP_13288125.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|421085449|ref|ZP_15546302.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|421103681|ref|ZP_15564278.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601805|gb|AAS71284.1| acetoin- histone deacetylase family [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|409942591|gb|EKN88199.1| histone deacetylase family protein [Leptospira interrogans str.
2002000624]
gi|409952383|gb|EKO06896.1| histone deacetylase family protein [Leptospira interrogans str.
C10069]
gi|410366644|gb|EKP22035.1| histone deacetylase family protein [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432085|gb|EKP76443.1| histone deacetylase family protein [Leptospira santarosai str.
HAI1594]
gi|410574414|gb|EKQ37447.1| histone deacetylase family protein [Leptospira interrogans str.
2002000621]
gi|410578349|gb|EKQ46211.1| histone deacetylase family protein [Leptospira interrogans str.
2002000623]
gi|410759628|gb|EKR25840.1| histone deacetylase family protein [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410775756|gb|EKR55747.1| histone deacetylase family protein [Leptospira interrogans str. UI
12758]
gi|455791354|gb|EMF43170.1| histone deacetylase family protein [Leptospira interrogans serovar
Lora str. TE 1992]
gi|456824751|gb|EMF73177.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. LT1962]
gi|456982662|gb|EMG19194.1| histone deacetylase family protein [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 313
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L + + + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 87 TEKSWISAYSAANSGIILSEFLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q +G K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+
Sbjct: 143 ITARYLQN-NGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGK 201
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G G+T N+P+ SGD A F E+IVP +RF+PD++L+SAG+DAH DPL +
Sbjct: 202 GKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNI 261
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L I + A +C + + FLEGGY+L +LS SV
Sbjct: 262 TTKGFEDLTRIILESADKICSGKVLSFLEGGYDLAALSESV 302
>gi|289581869|ref|YP_003480335.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|448282720|ref|ZP_21474004.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|289531422|gb|ADD05773.1| Histone deacetylase [Natrialba magadii ATCC 43099]
gi|445575684|gb|ELY30152.1| histone deacetylase [Natrialba magadii ATCC 43099]
Length = 344
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 169/316 (53%), Gaps = 17/316 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +DDIA++H R Y+ +++ + T A T+ A+
Sbjct: 38 VEYVEADPCPIDDIAAIHDRDYIESVKEFCEDGGGNW------DPDTTAVEETWDAICAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--QRA 130
AG VD+ A + P FA+ RPPGHHA+P MGFC NVAIAA++A
Sbjct: 92 AGQACWAVDAALAGDSGRKTP--FAIGRPPGHHAVPDDAMGFCFANNVAIAAQHALDHDE 149
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
+ + RV I D+DVHHGNGT D F D D+FF+S H+ G YPGTG ++E G GDG G+T+N
Sbjct: 150 YDVDRVAIFDWDVHHGNGTQDIFEDRDDVFFVSIHEQGLYPGTGDVEETGSGDGAGTTMN 209
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+P+P G+ D F I + F PDL+L+SAG+DAH DP++ ++ +T Y +L
Sbjct: 210 IPMPAGTSDAGYLAAFDGPITAALESFDPDLLLISAGFDAHRHDPISRIRLSTEAYALLT 269
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++ + +L + F LEGGY L+ L+ SV+ F G + D EE
Sbjct: 270 DRVRTRSDEL-DAPLAFILEGGYGLDVLADSVSIVHETFDGREPLGPDDD------EEID 322
Query: 311 AKVKQAIERVKHIHSL 326
V+ A+E V H L
Sbjct: 323 EAVEDALEAVLEEHEL 338
>gi|448721111|ref|ZP_21703694.1| histone deacetylase superfamily protein [Halobiforma
nitratireducens JCM 10879]
gi|445779682|gb|EMA30599.1| histone deacetylase superfamily protein [Halobiforma
nitratireducens JCM 10879]
Length = 360
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 165/302 (54%), Gaps = 25/302 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL-- 70
+E P DDIASVH R+YV +E+ EG G T +E+
Sbjct: 38 VEYVEADPVGFDDIASVHDRSYVEDVEE----------FCAEGGGNWDPDTTAVEETWDA 87
Query: 71 ---AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+A A A+ ++ + R P F++ RPPGHHA+ MGFC NVA+AA+ A
Sbjct: 88 IRYSAGQATWAIEQALEGNTGRETP---FSIGRPPGHHAVVDDAMGFCFVNNVAVAAQQA 144
Query: 128 --QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
A+ + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG+IDE G GDGE
Sbjct: 145 LEDDAYDVDRVAIVDWDVHHGNGTQDIFYDREDVFFVSIHEKGLYPGTGQIDESGEGDGE 204
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
+T+NLP+P G+ D I + + PDL++VSAG+DAH DP++ ++ +T
Sbjct: 205 RTTMNLPMPAGTDDVDYLAAVEGPIATALEAYDPDLLIVSAGFDAHRHDPISRIRLSTEA 264
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG----EPSKASEFDN 301
Y +L ++ LA D + F LEGGY L+ L+ SV+ F G EP E +
Sbjct: 265 YALLTDRLRGLA-DRTDAALAFVLEGGYGLDVLADSVSIVHETFDGREPIEPDDDEEVSD 323
Query: 302 PA 303
A
Sbjct: 324 DA 325
>gi|417766121|ref|ZP_12414075.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|418670332|ref|ZP_13231703.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418689537|ref|ZP_13250658.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|418710471|ref|ZP_13271242.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418725219|ref|ZP_13283895.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|421128071|ref|ZP_15588289.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421133453|ref|ZP_15593601.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|400351575|gb|EJP03794.1| histone deacetylase family protein [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400361216|gb|EJP17183.1| histone deacetylase family protein [Leptospira interrogans str.
FPW2026]
gi|409961601|gb|EKO25346.1| histone deacetylase family protein [Leptospira interrogans str. UI
12621]
gi|410022461|gb|EKO89238.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410434538|gb|EKP83676.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410753714|gb|EKR15372.1| histone deacetylase family protein [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410769407|gb|EKR44649.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|456971347|gb|EMG11975.1| histone deacetylase family protein [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 313
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L + + + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 87 TEKSWISAYSAANSGIILSEFLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q +G K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+
Sbjct: 143 ITARYLQN-NGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGK 201
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G G+T N+P+ SGD A F E+IVP +RF+PD++L+SAG+DAH DPL +
Sbjct: 202 GKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNI 261
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L I + A +C + + FLEGGY+L +LS SV
Sbjct: 262 TTKGFEDLTRIILESADKICSGKVLSFLEGGYDLAALSESV 302
>gi|254467135|ref|ZP_05080546.1| histone deacetylase family protein [Rhodobacterales bacterium Y4I]
gi|206688043|gb|EDZ48525.1| histone deacetylase family protein [Rhodobacterales bacterium Y4I]
Length = 308
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 165/286 (57%), Gaps = 14/286 (4%)
Query: 11 EIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
E ++L+ + A+ DDI +H +Y+S L A + +G I+G T+ + +
Sbjct: 35 EPLDLRRVTAPMAAEDDILRIHPASYLSDLRNA---SPAEGWAQIDGD--TFLSPGSLDA 89
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAGA + VD V + + FA +RPPGHHA MGFC+FGN A+AA++A
Sbjct: 90 AFRAAGAVVRGVDMVLGGEVQN----AFAAVRPPGHHAETDTAMGFCLFGNAALAAKHAL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
HGLKRV ++DFDVHHGNGT D +D+P +++ Q +PG+G+ DE G G
Sbjct: 146 DHHGLKRVAVVDFDVHHGNGTQDLLWDEPRALVITSQQMPLWPGSGRPDEDG---AHGQI 202
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LNLPL GSG M+ + P + FKP+LI++SAG+DAH DPLASL + T +
Sbjct: 203 LNLPLAPGSGRAEMQAAYESQAFPRLRAFKPELIIISAGFDAHQDDPLASLNWATADFAW 262
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L A + +LA +LC R V LEGGY+LN+LS + + P+
Sbjct: 263 LTAELCKLASELCQGRIVSTLEGGYDLNALSAATRAHVEELMKAPA 308
>gi|147678368|ref|YP_001212583.1| deacetylases [Pelotomaculum thermopropionicum SI]
gi|146274465|dbj|BAF60214.1| deacetylases [Pelotomaculum thermopropionicum SI]
Length = 355
Score = 207 bits (526), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 122/308 (39%), Positives = 170/308 (55%), Gaps = 20/308 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS--GPTYATATTFQESLAAAGAGI 77
PA+V++++ VH AY+ +++ R GS T + TF+ +L AAG +
Sbjct: 57 PATVEEVSLVHLPAYIERVKEFSKRGG--------GSFGNNTTGSPETFETALLAAGGTL 108
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
+ V++V + FAL+RPPGHHA P MG+C F N AIAARYA + +GL RV
Sbjct: 109 SAVEAVLEGRVES----AFALVRPPGHHARPGQAMGYCFFNNAAIAARYAIKRYGLSRVL 164
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
IID+D HHGNGT + FY DP + + S H+D SYPGTG+ + G G+G+G +N+PLP S
Sbjct: 165 IIDWDEHHGNGTEEIFYSDPSVLYFSVHRDWSYPGTGQAAKAGDGEGKGFNINVPLPKRS 224
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
GD VF ++ P A ++P L+LVSAG+DAH D + + T Y L + ++A
Sbjct: 225 GDADYEHVFRRILRPVALAYRPQLVLVSAGFDAHRDDLIGQMSLTPYGYMALTGIVCEIA 284
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP-SAKVKQA 316
CG LEGGYN +L+ SV G + +S PA E+P V
Sbjct: 285 T-CCGGALAAVLEGGYNPGALAESVFAVLHTMAGWDAGSS--SQPAD--EKPVKVNVMGI 339
Query: 317 IERVKHIH 324
IE V IH
Sbjct: 340 IEEVVKIH 347
>gi|433592621|ref|YP_007282117.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|448335059|ref|ZP_21524211.1| histone deacetylase [Natrinema pellirubrum DSM 15624]
gi|433307401|gb|AGB33213.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|445617995|gb|ELY71579.1| histone deacetylase [Natrinema pellirubrum DSM 15624]
Length = 344
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 169/318 (53%), Gaps = 23/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ A
Sbjct: 38 VEYVEADPCDLDAMATVHEREYLESVRE----------FCADGGGSWDPDTTAVEETWDA 87
Query: 73 AG--AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
A AG+A + A + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 ASRSAGLACWAAEEALEGATGRETPFSIGRPPGHHAVYDNAMGFCFVNNVAVAAQHALDH 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPG+G IDE G GDGEG+T
Sbjct: 148 DAYDVDRVAILDWDVHHGNGTQDIFYDRGDVFFVSLHEQGLYPGSGDIDETGEGDGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDGEYLAAVDGPIAAALTDFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L+ ++ LA+D + F LEGGY L+ L+ SVA F G P +E
Sbjct: 268 LSDRVRTLAED-TDAALAFILEGGYGLDVLADSVAMVHETFDGR--------EPIEPDDE 318
Query: 309 PSAKVKQAIERVKHIHSL 326
P + +E V H L
Sbjct: 319 PDDNAESTLEDVLEAHDL 336
>gi|347755697|ref|YP_004863261.1| deacetylase [Candidatus Chloracidobacterium thermophilum B]
gi|347588215|gb|AEP12745.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Candidatus Chloracidobacterium thermophilum B]
Length = 329
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 156/277 (56%), Gaps = 6/277 (2%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ D++A VH +++ + +A RA+Q L+ T +A +++ + AAGA +A
Sbjct: 52 PATTDELARVHTPDHLARVAEA-SRAAQARQQLVALDPDTVVSAGSYEAAGDAAGAVLAA 110
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V+++ K R F RPPGHHA P MGFC+F NVA+ AR+AQ G +RV I+
Sbjct: 111 VEAIHQGKAR----RAFVAARPPGHHATPNRAMGFCLFNNVAVGARHAQHL-GFQRVLIV 165
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
D+DVHHGNGT D FY DP +FF S HQ YPGTG E G G GEG TLN+PL G+
Sbjct: 166 DWDVHHGNGTQDIFYADPSVFFFSIHQFPHYPGTGSQWERGVGPGEGFTLNVPLRAGTPA 225
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
A F + F PD + +SAG+DAHV DPL +L T + + + ++A
Sbjct: 226 AAYLEAFEAGLETITSHFHPDFVFISAGFDAHVADPLGNLNLTDRDFVQMTHLVNKVADR 285
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKA 296
R V LEGGYNL++L +V A G +A
Sbjct: 286 FSAGRLVSVLEGGYNLDTLPQTVCHHVAALAGVAEEA 322
>gi|448494505|ref|ZP_21609492.1| histone deacetylase superfamily protein [Halorubrum californiensis
DSM 19288]
gi|445689340|gb|ELZ41580.1| histone deacetylase superfamily protein [Halorubrum californiensis
DSM 19288]
Length = 334
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 167/314 (53%), Gaps = 27/314 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA I +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEADPAEKAAITAVHDDEYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAG A A +++ + R P FA+ RPPGHHA+ MGFC F N A+AA+ A
Sbjct: 88 ALTAAGLAQWAAREALDGATGRQTP---FAIGRPPGHHAVTDDAMGFCFFNNAAVAAQTA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G GDGEG+
Sbjct: 145 IDEGLADRVAIFDWDVHHGNGTQDIFYDSEDVFYASIHEDGLYPDTGALDETGEGDGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E I P RF PDL +VSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEGITPAVDRFDPDLFIVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ G+ + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRTLAADV-GAADAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVDTDE 315
Query: 308 EPSAKVKQAIERVK 321
EP K + ++ ++
Sbjct: 316 EPDQKTEALVDDLR 329
>gi|448384118|ref|ZP_21563116.1| histone deacetylase [Haloterrigena thermotolerans DSM 11522]
gi|445659107|gb|ELZ11919.1| histone deacetylase [Haloterrigena thermotolerans DSM 11522]
Length = 344
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 169/318 (53%), Gaps = 23/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ A
Sbjct: 38 VEYVEADPCDLDAMATVHEREYLESVRE----------FCADGGGSWDPDTTAVEETWDA 87
Query: 73 AG--AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
A AG+A + A + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 ASRSAGLACWAAEEALEGATGRETPFSIGRPPGHHAVYDNAMGFCFVNNVAVAAQHALDH 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + RV IID+DVHHGNGT D FYD D+FF+S H+ G YPG+G IDE G GDGEG+T
Sbjct: 148 DAYDVDRVAIIDWDVHHGNGTQDIFYDRGDVFFVSLHEQGLYPGSGDIDETGAGDGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDGEYLAAVDGPIAAALTDFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L+ ++ LA+D + F LEGGY L+ L+ SVA F G P +E
Sbjct: 268 LSDRVRTLAED-TDAALAFILEGGYGLDVLADSVAMVHETFDGR--------EPIEPDDE 318
Query: 309 PSAKVKQAIERVKHIHSL 326
P + +E V H L
Sbjct: 319 PDDNAESTLEDVLEAHDL 336
>gi|448513829|ref|ZP_21616760.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
9100]
gi|448526661|ref|ZP_21619930.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
10118]
gi|445692982|gb|ELZ45145.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
9100]
gi|445698888|gb|ELZ50926.1| histone deacetylase superfamily protein [Halorubrum distributum JCM
10118]
Length = 334
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 167/311 (53%), Gaps = 27/311 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA + +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEADPAEKAAVTAVHDPDYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A +++ S R P FA+ RPPGHHA+ MGFC F N A+AA+ A
Sbjct: 88 ALTSAGLAQWAAREALTGSTGRQTP---FAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G GDGEG+
Sbjct: 145 LDEDLADRVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEDGLYPDTGDLDETGEGDGEGA 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E I P RF PDL++VSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ G+ + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRSLADDV-GAANAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVATDE 315
Query: 308 EPSAKVKQAIE 318
+P AK + ++
Sbjct: 316 DPDAKTETLVD 326
>gi|221633525|ref|YP_002522750.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
gi|221155670|gb|ACM04797.1| hdac6 protein [Thermomicrobium roseum DSM 5159]
Length = 368
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 164/276 (59%), Gaps = 12/276 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ D++ + H Y++ +++ ++ G ++ P +++ +L AAGA I L
Sbjct: 64 PATEDELTAYHTPEYIAHVQQV----TKSGGGWLDPETPV--VPGSWEAALLAAGAAIEL 117
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
D V A + F L+RPPGHHA+ MGFCVF NV +A R+AQR G++R+ ++
Sbjct: 118 TDVVLAGRAS----CAFGLLRPPGHHAMRDQGMGFCVFNNVVLATRHAQR-RGVQRIMVL 172
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT AF+DDP + F+S HQD YP G G +D++G D EG+T+N+PLP G+G
Sbjct: 173 DWDVHHGNGTQAAFWDDPSVLFVSLHQDNWYPEGWGAVDQIGGPDSEGTTVNIPLPPGTG 232
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ ++VP A++F+P++I VSAG DA + DPL + T Y +A ++ LA
Sbjct: 233 NRGYLAALERIVVPIARQFRPEMIFVSAGQDASMEDPLGRMLVTMRGYRAMARLVRDLAD 292
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+LC R V +EGGY+L + + +G S
Sbjct: 293 ELCAGRLVVLMEGGYSLRYVPFCTLAVIEGMIGRES 328
>gi|421114631|ref|ZP_15575046.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410013813|gb|EKO71889.1| histone deacetylase family protein [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
Length = 313
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 162/269 (60%), Gaps = 15/269 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E+K F +++I H++ ++ +E + ++G T T ++ + +AA
Sbjct: 49 EMKKFPNEFLNEI---HSQNHIQKIENS---KGKRGYF----DSDTPFTEKSWISAYSAA 98
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+GI L + + + + GF+L+RPPGHHA MGFC+ NVAI ARY Q +G
Sbjct: 99 NSGIILSEFLISGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQN-NGF 153
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+G G G+T N+P+
Sbjct: 154 KKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGKGKGIGTTKNIPM 213
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
SGD A F E+IVP +RF+PD++L+SAG+DAH DPL + TT + L I
Sbjct: 214 QVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNITTKGFEDLTRII 273
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ +C + + FLEGGY+L +LS SV
Sbjct: 274 LESVDKICSGKVLSFLEGGYDLAALSESV 302
>gi|448482815|ref|ZP_21605586.1| histone deacetylase superfamily protein [Halorubrum arcis JCM
13916]
gi|445821101|gb|EMA70897.1| histone deacetylase superfamily protein [Halorubrum arcis JCM
13916]
Length = 334
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 167/311 (53%), Gaps = 27/311 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA + +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEADPAEKAAVTAVHDPDYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A +++ S R P FA+ RPPGHHA+ MGFC F N A+AA+ A
Sbjct: 88 ALTSAGLAQWAAREALTGSTGRQTP---FAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G GDGEG+
Sbjct: 145 LDEGLADRVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEDGLYPDTGDLDETGEGDGEGA 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E I P RF PDL++VSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ G+ + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRSLADDV-GATNAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVATDE 315
Query: 308 EPSAKVKQAIE 318
+P AK + ++
Sbjct: 316 DPDAKTETLVD 326
>gi|254477077|ref|ZP_05090463.1| histone deacetylase family protein [Ruegeria sp. R11]
gi|214031320|gb|EEB72155.1| histone deacetylase family protein [Ruegeria sp. R11]
Length = 308
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/256 (42%), Positives = 156/256 (60%), Gaps = 12/256 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DDI +H +Y++ L A+ Q G + ++ TY + + + AAGA + V
Sbjct: 47 AAEDDILRIHPASYLADLRNAV---PQDGRVQLDAD--TYMSPGSLDAAFRAAGAVVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + + FA +RPPGHHA MGFC+FGN A+AA++A HGL RV ++D
Sbjct: 102 DMVLSGEVQN----AFAAVRPPGHHAETDTAMGFCLFGNAALAAKHALDHHGLARVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+P F+S+ Q +PG+G+ +E G G LNLPLP GSG
Sbjct: 158 FDVHHGNGTQDLLWDEPRALFISSQQMPLWPGSGRPEEDG---AHGQILNLPLPPGSGGV 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
M+ + + P + FKP+LI++SAG+DAH DPLA L ++T + L+ + LA++L
Sbjct: 215 QMKAAYVDQAFPRLRAFKPELIIISAGFDAHQDDPLAELAWSTEDFRWLSRELCSLAQEL 274
Query: 261 CGSRCVFFLEGGYNLN 276
CG R V LEGGY+LN
Sbjct: 275 CGGRIVSTLEGGYDLN 290
>gi|448444633|ref|ZP_21589923.1| histone deacetylase superfamily protein [Halorubrum saccharovorum
DSM 1137]
gi|445686046|gb|ELZ38387.1| histone deacetylase superfamily protein [Halorubrum saccharovorum
DSM 1137]
Length = 334
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 168/310 (54%), Gaps = 18/310 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA+ +++ +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYAEADPATREEVVAVHDAEYVDELEA----------FVADGGGSWDPDTVASEGTWDA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L +AG S + D P FAL RPPGHHA+P MGFC F N A+AA+
Sbjct: 88 ALTSAGLSQWAARSALDGDDGRDTP--FALGRPPGHHAVPDDAMGFCFFNNAAVAAQTVL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
RV I D+DVHHGNGT D FYD D+F+ S H++G YP TG +DE GR +GEG+T
Sbjct: 146 DDGAADRVAIFDWDVHHGNGTQDVFYDRGDVFYASIHEEGLYPDTGALDETGRDEGEGTT 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+NLPL G+GD E + P +RF PDL++VSAG+DAH DP++ ++ ++ Y +
Sbjct: 206 VNLPLAAGAGDADYLYAIDEAVAPALERFDPDLVIVSAGFDAHRHDPISRMRVSSEGYAL 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
+ I+ + D G+ + LEGGY L++L+ V+ F G + S+ D P E
Sbjct: 266 MTDRIRSV-TDEIGAANAYVLEGGYGLDTLAEGVSMVHETFDGR-TPVSDDDEPDGKTET 323
Query: 309 PSAKVKQAIE 318
A ++ I+
Sbjct: 324 LVADLRSLID 333
>gi|254818410|ref|ZP_05223411.1| histone deacetylase superfamily protein [Mycobacterium
intracellulare ATCC 13950]
Length = 255
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/267 (43%), Positives = 151/267 (56%), Gaps = 16/267 (5%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH+ YV LE A + G + ++G G T +T++ +L GA + VD V A
Sbjct: 4 VHSNRYVDALEAAR---PEHGYVYLDG-GDTMMEPSTWETALRGVGATLRAVDRVLAG-- 57
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
D F RPPGHHA + MGFC+F N++I AR+AQR HGL RV I+DFDVHHGNG
Sbjct: 58 --DVQNAFVACRPPGHHAESERAMGFCLFNNISIGARHAQRKHGLMRVAIVDFDVHHGNG 115
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T FY DP + + STHQ +PGTG E G G+ N PL G G +R F +
Sbjct: 116 TQQIFYSDPSVLYASTHQMPLFPGTGAARETGVGN----IFNAPLAPGDGGAELRAAFAD 171
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
I+P F P+LI+VSAG+DAH DPL SL TT + + + + A+ LC R V
Sbjct: 172 RILPALHAFSPELIIVSAGFDAHERDPLGSLTMTTDDFAWVTRELMKSAEMLCDGRLVAV 231
Query: 269 LEGGYNLNSLSYSVADSFRAFLGEPSK 295
LEGGY+L +L ADS A +GE K
Sbjct: 232 LEGGYDLQAL----ADSVTAHVGELVK 254
>gi|448366508|ref|ZP_21554631.1| histone deacetylase [Natrialba aegyptia DSM 13077]
gi|445653963|gb|ELZ06819.1| histone deacetylase [Natrialba aegyptia DSM 13077]
Length = 341
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 168/310 (54%), Gaps = 23/310 (7%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAG 74
P S+D+IA+VH RAYV +E +G G T A T+ +AG
Sbjct: 44 DPCSLDEIAAVHDRAYVESVES----------FCADGGGNWDPDTTAVEDTWDAIRYSAG 93
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--QRAHG 132
VD+ + + P F++ RPPGHHA+ MGFC NVA+AA++A +
Sbjct: 94 QACWAVDAALSGETGRQTP--FSIGRPPGHHAVEDDAMGFCFVNNVAVAAQHALDHDDYD 151
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
+ RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G GD G+T+N+P
Sbjct: 152 VDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEQGLYPGTGDIDETGAGDATGTTMNIP 211
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
+P G+ D I + F PDL+LVSAG+DAH DP++ ++ +T Y +LA
Sbjct: 212 MPAGTDDAGYLAAVDGPIAAALESFDPDLLLVSAGFDAHRHDPISRIRLSTEAYALLADR 271
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG----EPSKASEFDNPAILYEE 308
++ LA D S F LEGGY L+ L+ SV+ F G +P A D + E+
Sbjct: 272 LRTLAADTDAS-LAFVLEGGYGLDVLADSVSIVHETFDGRDPIQPDDAELDDQVVSVLED 330
Query: 309 PSAKVKQAIE 318
A AI+
Sbjct: 331 VLAAHDVAID 340
>gi|448451263|ref|ZP_21592746.1| histone deacetylase superfamily protein [Halorubrum litoreum JCM
13561]
gi|445810697|gb|EMA60713.1| histone deacetylase superfamily protein [Halorubrum litoreum JCM
13561]
Length = 334
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 121/311 (38%), Positives = 167/311 (53%), Gaps = 27/311 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA + +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEAEPAEKAAVTAVHDPDYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A +++ S R P FA+ RPPGHHA+ MGFC F N A+AA+ A
Sbjct: 88 ALTSAGLAQWAAREALTGSTGRQTP---FAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G GDGEG+
Sbjct: 145 LDEGLADRVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEDGLYPDTGDLDETGEGDGEGA 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E I P RF PDL++VSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ G+ + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRSLADDV-GAANAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVATDE 315
Query: 308 EPSAKVKQAIE 318
+P AK + ++
Sbjct: 316 DPDAKTETLVD 326
>gi|327400501|ref|YP_004341340.1| histone deacetylase superfamily protein [Archaeoglobus veneficus
SNP6]
gi|327316009|gb|AEA46625.1| histone deacetylase superfamily [Archaeoglobus veneficus SNP6]
Length = 359
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/328 (39%), Positives = 177/328 (53%), Gaps = 24/328 (7%)
Query: 7 FRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTF 66
F EI+ L+ F AS D+ +VH Y L++ + + G+I + S P
Sbjct: 40 FENREIVLLEPFK-ASESDVLAVHTPEYFEFLKR---ESRKGGVIDWDTSIPV----GLI 91
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+L AAG I +VA + FA++RPPGHHA P GFC N+AIA ++
Sbjct: 92 DVALLAAGGAIRAAKAVAEGEVDN----AFAMVRPPGHHARPYTGAGFCYLNNIAIATKW 147
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
QR +G K++ I+D+D HHG+GT + FY+D + F+S HQ YPGTG E G+G+GEG
Sbjct: 148 LQR-NGFKKILILDWDAHHGDGTQEIFYEDSSVLFISLHQMPLYPGTGYPHEYGKGEGEG 206
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
T+N+PLP G+GD TVF E+I P A F+PD I VSAG D H DPL SL T Y
Sbjct: 207 YTINVPLPPGAGDECYLTVFDEIIEPVAIDFEPDFIAVSAGQDNHFTDPLTSLALTARGY 266
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNL-NSLSYS-------VADSFRAFLGEP-SKAS 297
L ++LA+ LC R LEGGY++ +L Y+ +A+ + + EP S A
Sbjct: 267 AELMVRARRLAEKLCDGRLFAVLEGGYSVEKALPYTNLAIIAAMAEMDISCIREPESYAD 326
Query: 298 EFDNPAILYEEPSAKVKQAIERVKHIHS 325
E E V+ I+ VK IHS
Sbjct: 327 ELKWRK--KESAIETVRATIQEVKRIHS 352
>gi|452965698|gb|EME70717.1| histone deacetylase superfamily protein [Magnetospirillum sp. SO-1]
Length = 307
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/225 (44%), Positives = 142/225 (63%), Gaps = 7/225 (3%)
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+ +L +AGAGIA VD+VA + R F +RPPGHHA MGFC F N AIAA +
Sbjct: 89 EAALRSAGAGIAAVDAVAKGEVRN----SFCAVRPPGHHAERDNAMGFCFFNNAAIAALH 144
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
A+ +G KRV I+D DVHHGNGT +D+ + + STHQ+ +YP TG DE G GEG
Sbjct: 145 AREVYGYKRVAIVDIDVHHGNGTQHILWDEKGMLYASTHQEHAYPNTGLADETG---GEG 201
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+N+PLP G+G R F ++++P + F PD +++SAG+DAH DPLA L+ TT +
Sbjct: 202 IMVNVPLPAGTGSDDYRMAFTDILLPRLREFAPDFLIISAGFDAHAADPLAHLRLTTADF 261
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ + Q+A++ G+R V LEGGY+L +L+ S + RA +G
Sbjct: 262 GWVTRQLLQVAEETAGNRVVSLLEGGYDLRALAASAREHVRALMG 306
>gi|41407270|ref|NP_960106.1| hypothetical protein MAP1172c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|440776770|ref|ZP_20955604.1| hypothetical protein D522_07918 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|41395622|gb|AAS03489.1| hypothetical protein MAP_1172c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|436723059|gb|ELP46927.1| hypothetical protein D522_07918 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 309
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 119/284 (41%), Positives = 156/284 (54%), Gaps = 16/284 (5%)
Query: 9 GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
G + + + PA + VH+ YV E A Q G + ++G G T +T++
Sbjct: 38 GFDALVRETAEPAELAATRYVHSNRYVDAPEAAR---PQHGYVYLDG-GDTMMEPSTWET 93
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L GA + VD V A D F RPPGHHA + MGFC+F N++I AR+AQ
Sbjct: 94 ALRGVGATLQAVDRVLAG----DVQNAFVACRPPGHHAETERAMGFCLFNNISIGARHAQ 149
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
R HGL RV I+DFDVHHGNGT FY DP + + STHQ +PGTG E G G+
Sbjct: 150 RKHGLMRVAIVDFDVHHGNGTQQIFYSDPSVLYASTHQMPLFPGTGAAAETGVGN----I 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N PL G G +R F + VP Q F P+LI+VSAG++AH DPL SL TT +
Sbjct: 206 FNSPLAPGDGGAELRAAFTDRFVPALQAFSPELIIVSAGFNAHERDPLGSLTMTTDDFGW 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + + A+ LC R V LEGGY+L +L ADS A +GE
Sbjct: 266 VTRELMKSAEKLCDGRLVAVLEGGYDLQAL----ADSVTAHVGE 305
>gi|89052582|ref|YP_508033.1| histone deacetylase superfamily protein [Jannaschia sp. CCS1]
gi|88862131|gb|ABD53008.1| histone deacetylase superfamily [Jannaschia sp. CCS1]
Length = 307
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/266 (40%), Positives = 154/266 (57%), Gaps = 12/266 (4%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
DD+A H + Y+ + +A QG++ I+ T A+ T++ ++ G + VD V
Sbjct: 48 DDVALCHPQDYIDAMREAQ---PAQGMVQIDAD--TSASPGTWEAAMRGVGGCLLAVDRV 102
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
+ ++ F RPPGHHA MGFC+FGN+AIAAR+A HGL RV I+DFDV
Sbjct: 103 LSGAHK----RAFVATRPPGHHAEKTRAMGFCLFGNIAIAARHALERHGLSRVAIVDFDV 158
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT D +D+P F+S+HQ YPG+G + E G D + LNLPLP GS AMR
Sbjct: 159 HHGNGTQDLLWDEPRALFVSSHQMPLYPGSGAVHERGASD---NVLNLPLPPGSDGQAMR 215
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+ + + P + ++PDLIL+SAG+DAH DPLA+L + + + + LA+++C
Sbjct: 216 SRYTSHVFPRLRDWQPDLILISAGFDAHTRDPLANLLWEAEDFAWVTRELVALAEEVCEG 275
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAF 289
R V LEGGY+L L V R
Sbjct: 276 RIVSTLEGGYDLQGLGDGVLAHVREL 301
>gi|448350484|ref|ZP_21539297.1| histone deacetylase [Natrialba taiwanensis DSM 12281]
gi|445636754|gb|ELY89914.1| histone deacetylase [Natrialba taiwanensis DSM 12281]
Length = 341
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/314 (38%), Positives = 170/314 (54%), Gaps = 28/314 (8%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAGA 75
P S+D+IA+VH RAYV +E +G G T A T+ +AG
Sbjct: 45 PCSLDEIAAVHDRAYVESVES----------FCADGGGNWDPDTTAVEDTWDAIRYSAGQ 94
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--QRAHGL 133
VD+ + + P F++ RPPGHHA+ MGFC NVA+AA++A + +
Sbjct: 95 ACWAVDAALSGETGRQTP--FSIGRPPGHHAVTDDAMGFCFVNNVAVAAQHALDHDDYDV 152
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G GD G+T+N+P+
Sbjct: 153 DRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEQGLYPGTGDIDETGAGDATGTTMNIPM 212
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
P G+ D I + F PDL+LVSAG+DAH DP++ ++ +T Y +LA +
Sbjct: 213 PAGTDDAGYLAAVDGPIAAALESFNPDLLLVSAGFDAHRHDPISRIRLSTEAYALLADRL 272
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EPSKASEFDNPAILYEEPSAK 312
+ LA D S F LEGGY L+ L+ SV+ F G +P + + +E +
Sbjct: 273 RTLAADTDAS-LAFVLEGGYGLDVLADSVSIVHETFDGRDPIQPDD--------DELDEQ 323
Query: 313 VKQAIERVKHIHSL 326
V +E V H L
Sbjct: 324 VVSVLEDVLAAHDL 337
>gi|288960068|ref|YP_003450408.1| histone deacetylase-like amidohydrolase [Azospirillum sp. B510]
gi|288912376|dbj|BAI73864.1| histone deacetylase-like amidohydrolase [Azospirillum sp. B510]
Length = 310
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/285 (41%), Positives = 159/285 (55%), Gaps = 14/285 (4%)
Query: 6 EFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
EFRG +E ++ A V+ ++ VH R+YV E + G ++G G T + +
Sbjct: 38 EFRG---LERRSAPEADVEQLSRVHERSYV---EAVLAAVPTDGYQRLDG-GDTLLSPGS 90
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
L AAG+ A VD+V + F +RP GHHA P MGFCVF N+A+ A
Sbjct: 91 RGAILRAAGSVCAAVDAVLGGEAAN----AFCAVRPCGHHAEPARAMGFCVFNNIAVGAE 146
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+A++ HGL RV ++DFDVHHGNGT F DDPD+FF STHQ YPGTG E G +
Sbjct: 147 HARKVHGLTRVAVVDFDVHHGNGTQAMFADDPDLFFASTHQSPLYPGTGNSWERGV---D 203
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+ LNLPL SG R VI+P + F+P+L+L+SAG+DAH DPLA L T
Sbjct: 204 GNILNLPLEPYSGSVEFRQAVERVILPALEAFQPELLLISAGFDAHKRDPLAQLGLTAED 263
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ + + +LA LCG R V LEGGY+ L+ A A +
Sbjct: 264 FEWVTRKLVELADRLCGGRVVSALEGGYDATGLAEGCAAHLTALM 308
>gi|328544913|ref|YP_004305022.1| histone deacetylase family [Polymorphum gilvum SL003B-26A1]
gi|326414654|gb|ADZ71717.1| Histone deacetylase family, putative [Polymorphum gilvum
SL003B-26A1]
Length = 309
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/271 (42%), Positives = 151/271 (55%), Gaps = 12/271 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E +N +V+ IA VH AYV L KA A +G++ I+ T + +++ +L
Sbjct: 42 LERENAPMGTVEAIARVHPMAYVDSLYKA---APTEGLVRIDAD--TTMSPGSWEAALRG 96
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA VD V A K F+ RPPGHHA MGFC+F N AIAAR+AQ AHG
Sbjct: 97 VGAACQAVDEVVAKKVSN----AFSASRPPGHHAEKARAMGFCLFNNAAIAARHAQSAHG 152
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+RV I+DFDVHHGNGT D F+ DP + + STHQ YPG+G DE G + + +N+P
Sbjct: 153 LERVAIVDFDVHHGNGTQDIFWADPSVMYCSTHQMPLYPGSGAADETGEAN---TIVNVP 209
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L G R F VI+P F PDL+++SAG+DAHV DPL L +
Sbjct: 210 LAAGDDGAVFREAFQTVILPRLDAFAPDLVVISAGFDAHVRDPLGGLNLVEADFGWATKA 269
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ +A R V LEGGY+L L+ SVA
Sbjct: 270 LMDVADRHSDGRVVSILEGGYDLEGLARSVA 300
>gi|313127406|ref|YP_004037676.1| deacetylase [Halogeometricum borinquense DSM 11551]
gi|448288120|ref|ZP_21479321.1| deacetylase [Halogeometricum borinquense DSM 11551]
gi|312293771|gb|ADQ68231.1| deacetylase, histone deacetylase/acetoin utilization protein
[Halogeometricum borinquense DSM 11551]
gi|445570159|gb|ELY24725.1| deacetylase [Halogeometricum borinquense DSM 11551]
Length = 338
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 154/270 (57%), Gaps = 13/270 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T A+ T+ +L +AG + + D P F+L RPPGHHA+ MGFC
Sbjct: 78 TVASEDTWDAALVSAGLAQWAARAAVEGADERDTP--FSLGRPPGHHAVENDAMGFCFIN 135
Query: 119 NVAIAARYAQRAHGL--KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
N A+AA+ L +RV I D+DVHHGNGT D FYD D+F+ S H+ G YPGTG+I
Sbjct: 136 NAAVAAQTVIDDDELDAERVAIFDWDVHHGNGTQDIFYDRGDVFYASLHEGGLYPGTGEI 195
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
DE+G GDGEG+TLN+PL G+GD V EV+ P ++F PDLI++SAG+DAH DP+
Sbjct: 196 DEIGEGDGEGTTLNVPLEAGAGDADYELVISEVLRPALEQFDPDLIIISAGFDAHRHDPI 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKA 296
+ ++ +T Y L +++ +A D+ + F LEGGY L++LS VA F G
Sbjct: 256 SRMRVSTEGYAQLTDSVRAIANDV-DAGLAFVLEGGYGLDTLSEGVAIVHETFDGR---- 310
Query: 297 SEFDNPAILYEEPSAKVKQAIERVKHIHSL 326
P + E+ K + IE V H +
Sbjct: 311 ----TPMEIEEDHDEKTEAIIEDVLDAHGI 336
>gi|418720583|ref|ZP_13279780.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|421094501|ref|ZP_15555217.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410362563|gb|EKP13600.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200801926]
gi|410742989|gb|EKQ91733.1| histone deacetylase family protein [Leptospira borgpetersenii str.
UI 09149]
gi|456891461|gb|EMG02172.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200701203]
Length = 313
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
+H+ A++ +E++ ++G T T ++ + +AA +GI L D++ +
Sbjct: 61 IHSSAHLQKIERS---KGKRGYF----DSDTPFTEKSWIAAYSAANSGITLADALISGTI 113
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ GF+L+RPPGHHA MGFC+ NVAI ARY Q+ +G K++FIID+DVHHGNG
Sbjct: 114 KN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQK-NGFKKIFIIDWDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T + FY DP++F+LS HQ YP TG E G+ +G G+T N+P+ S + A F E
Sbjct: 169 TQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKE 228
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P + F+PD++L+SAG+DAH DPL + TT + L + + A +C + + F
Sbjct: 229 VVIPTMEHFEPDIVLISAGFDAHKEDPLGEMDITTKGFEDLTKIVLESADKICEGKVLSF 288
Query: 269 LEGGYNLNSLSYSV 282
LEGGYNL +LS SV
Sbjct: 289 LEGGYNLTALSESV 302
>gi|418735717|ref|ZP_13292126.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
gi|410748656|gb|EKR01551.1| histone deacetylase family protein [Leptospira borgpetersenii
serovar Castellonis str. 200801910]
Length = 313
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
+H+ A++ +E++ ++G T T ++ + +AA +GI L D++ +
Sbjct: 61 IHSSAHLQKIERS---KGKRGYF----DSDTPFTEKSWIAAYSAANSGITLADALISGTI 113
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ GF+L+RPPGHHA MGFC+ NVAI ARY Q+ +G K++FIID+DVHHGNG
Sbjct: 114 KN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQK-NGFKKIFIIDWDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T + FY DP++F+LS HQ YP TG E G+ +G G+T N+P+ S + A F E
Sbjct: 169 TQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKE 228
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P + F+PD++L+SAG+DAH DPL + TT + L + + A +C + + F
Sbjct: 229 VVIPTMEHFEPDIVLISAGFDAHKEDPLGEMDITTKGFEDLTKIVLESADKICEGKVLSF 288
Query: 269 LEGGYNLNSLSYSV 282
LEGGYNL +LS SV
Sbjct: 289 LEGGYNLTALSESV 302
>gi|421098612|ref|ZP_15559277.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
gi|410798365|gb|EKS00460.1| histone deacetylase family protein [Leptospira borgpetersenii str.
200901122]
Length = 313
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 105/254 (41%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
+H+ A++ +E++ ++G T T ++ + +AA +GI L D++ +
Sbjct: 61 IHSSAHLQKIERS---KGKRGYF----DSDTPFTEKSWIAAYSAANSGITLADALLSGTI 113
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ GF+L+RPPGHHA MGFC+ NVAI ARY Q+ +GLK++FIID+DVHHGNG
Sbjct: 114 KN----GFSLLRPPGHHAEHNRIMGFCMLNNVAITARYLQK-NGLKKIFIIDWDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T + FY DP++F+LS HQ YP TG E G+ +G G+T N+P+ S + A F E
Sbjct: 169 TQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGKNEGIGTTKNIPMQANSDNQAYIQKFKE 228
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P + F PD++L+SAG+DAH DPL + TT + L + + A +C + + F
Sbjct: 229 VVIPTMEHFGPDVVLISAGFDAHKEDPLGGMNITTKGFEDLTKIVLESANKICEGKVLSF 288
Query: 269 LEGGYNLNSLSYSV 282
LEGGYNL +LS SV
Sbjct: 289 LEGGYNLTALSESV 302
>gi|448466838|ref|ZP_21599260.1| histone deacetylase superfamily protein [Halorubrum kocurii JCM
14978]
gi|445813264|gb|EMA63244.1| histone deacetylase superfamily protein [Halorubrum kocurii JCM
14978]
Length = 334
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 168/318 (52%), Gaps = 25/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA+ +++ +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYAEADPATREEVVAVHDAEYVDELES----------FVADGGGSWDPDTVASEGTWNA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+LA+AG S + D P FAL RPPGHHA+P MGFC F N ++AA+
Sbjct: 88 ALASAGLSQWAARSALDGADGRDTP--FALGRPPGHHAVPDDAMGFCFFNNASVAAQTVL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
RV I D+DVHHGNGT D FYD D+ + S H++G YP TG +DE GR +GE +T
Sbjct: 146 DDGAADRVAIFDWDVHHGNGTQDVFYDRDDVLYASIHEEGLYPDTGALDETGRDEGEETT 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+NLPL G+GD E I P +RF PDL++VSAG+DAH DP++ ++ ++ Y +
Sbjct: 206 VNLPLAAGAGDADYLYAIDEAIAPALERFDPDLLIVSAGFDAHRHDPISRMRVSSEGYAL 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
+ ++ + D+ G+ + LEGGY L++L+ V+ F G P E+
Sbjct: 266 MTDQLRSVTDDI-GAATAYVLEGGYGLDTLAEGVSMVHETFDGR--------TPVDSDED 316
Query: 309 PSAKVKQAIERVKHIHSL 326
P K + + ++ + L
Sbjct: 317 PDEKTESLVAELRELLDL 334
>gi|359728013|ref|ZP_09266709.1| histone deacetylase [Leptospira weilii str. 2006001855]
Length = 315
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 141/221 (63%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L D++ + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 89 TEKSWIAAYSAANSGITLADALLSGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 144
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q+ +G K++FIID+DVHHGNGT + FY DP++F+LS HQ YP TG E G+
Sbjct: 145 ITARYLQK-NGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGK 203
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
+G G+T N+P+ S A F EV++P + F PD++L+SAG+DAH DPL +
Sbjct: 204 NEGIGTTKNIPMQANSDSQAYIQKFKEVVIPTMEHFGPDVVLISAGFDAHKEDPLGGMNI 263
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L + + A +CG + + FLEGGYNL +LS SV
Sbjct: 264 TTKGFEDLTKIVLESADKICGGKVLSFLEGGYNLTALSESV 304
>gi|451946710|ref|YP_007467305.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
gi|451906058|gb|AGF77652.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
Length = 354
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/300 (39%), Positives = 171/300 (57%), Gaps = 20/300 (6%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP-TYATATTFQESLAAAGA 75
+F PAS D I H + + DR ++ + + P T + ++ ++ AAGA
Sbjct: 48 DFEPASHDIIGLNHGKDLI-------DRVAETAGKIFDALDPDTKTSPDSYAAAILAAGA 100
Query: 76 GIALVDSVA--ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
+ VD + A N GFAL+RPPGHHA MGFC+F NVA+AA+YA H +
Sbjct: 101 LVKGVDLLVEGAVDN------GFALVRPPGHHAERDRSMGFCLFNNVAVAAKYAISHHKM 154
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
KRV I+D+D+HHGNGT ++FYD + ++STHQ YPGTG + E G+G G+G T+N+PL
Sbjct: 155 KRVMIVDWDLHHGNGTQNSFYDSDMVLYVSTHQYPYYPGTGAVTETGKGKGDGYTINIPL 214
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
PG GD T+F ++IVP + + P+LIL+S G+D + DPL +++ T + L +
Sbjct: 215 PGYQGDIDYATIFDDIIVPIGKEYNPELILISCGFDIYKGDPLGAMEVTAPGFAYLTRAM 274
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKV 313
QLA+ +C R + LEGGY+LN LGEP N +EP++K+
Sbjct: 275 VQLAETVCEGRLLVTLEGGYDLNGQRDGAMAVLSELLGEPLDTGYPTN----LKEPASKL 330
>gi|410941647|ref|ZP_11373441.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
gi|410783196|gb|EKR72193.1| histone deacetylase family protein [Leptospira noguchii str.
2006001870]
Length = 313
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 143/221 (64%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L S+ + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 87 TEKSWISAYSAANSGITLSKSLISGTIKN----GFSLLRPPGHHAGHNRIMGFCMLNNVA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q +G K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG + E G+
Sbjct: 143 ITARYLQN-NGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLVTETGK 201
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G G+T N+P+ S + A F E++VP +RF+P+++L+SAG+DAH DPL +
Sbjct: 202 GKGIGTTKNIPMQVNSENQAYIQKFKEIVVPTMERFEPNVVLISAGFDAHKEDPLGGMNI 261
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L I + A +C + + FLEGGY+L +LS SV
Sbjct: 262 TTKGFEDLTRIILESADRICNGKVLSFLEGGYDLTALSESV 302
>gi|421121713|ref|ZP_15582006.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
gi|410345564|gb|EKO96660.1| histone deacetylase family protein [Leptospira interrogans str.
Brem 329]
Length = 313
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 142/221 (64%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L + + + + GF+L+RPP HHA MGFC+ NVA
Sbjct: 87 TEKSWISAYSAANSGIILSEFLISGTIKN----GFSLLRPPDHHAEHNRIMGFCMLNNVA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q +G K++FIID+DVHHGNGT + FY+DP+IF+LS HQ YP TG E G+
Sbjct: 143 ITARYLQN-NGFKKIFIIDWDVHHGNGTQEIFYEDPNIFYLSIHQFPFYPMTGLATETGK 201
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G G+T N+P+ SGD A F E+IVP +RF+PD++L+SAG+DAH DPL +
Sbjct: 202 GKGIGTTKNIPMQVNSGDQAYIQKFKEIIVPTMERFEPDIVLISAGFDAHKNDPLGGMNI 261
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L I + A +C + + FLEGGY+L +LS SV
Sbjct: 262 TTKGFEDLTRIILESADKICSGKVLSFLEGGYDLAALSESV 302
>gi|88602220|ref|YP_502398.1| histone deacetylase superfamily protein [Methanospirillum hungatei
JF-1]
gi|88187682|gb|ABD40679.1| histone deacetylase superfamily [Methanospirillum hungatei JF-1]
Length = 364
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/264 (41%), Positives = 144/264 (54%), Gaps = 12/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
I L PA DD+ VH + Y+ LE+A S G I+ TY ++L A
Sbjct: 45 IRLLTPKPAMRDDVLLVHTKEYLHFLEEA----SVNGAII---DADTYVPKGLIHDALLA 97
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG I D+V + R F L RPPGHHA GFC NVAI RY QR G
Sbjct: 98 AGGAITGADAVLNQEVRN----SFVLSRPPGHHAGRSHGAGFCYLNNVAIMVRYLQR-RG 152
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+R+ ++D+D HHGNGT + FYDDP + F S HQ YPG+G+ +++G GDG+G +NLP
Sbjct: 153 LRRIMVLDWDAHHGNGTEEIFYDDPSVLFCSVHQYPFYPGSGRFEDIGIGDGKGYNINLP 212
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
+P GS D R + E+I+P A + PD I +SAG D H DPL L T Y L
Sbjct: 213 IPAGSSDKVYRYLLEEIILPLADEYMPDAIAISAGQDNHFTDPLTGLALTAQGYARLMQE 272
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLN 276
+ LA +C R + LEGGY++
Sbjct: 273 MCILADSICYGRIIAVLEGGYSVE 296
>gi|302343340|ref|YP_003807869.1| histone deacetylase superfamily protein [Desulfarculus baarsii DSM
2075]
gi|301639953|gb|ADK85275.1| histone deacetylase superfamily [Desulfarculus baarsii DSM 2075]
Length = 343
Score = 204 bits (519), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 147/252 (58%), Gaps = 9/252 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T + +F+ +L AAG+ I L D G AL+RPPGHHA P MGFC+F
Sbjct: 82 TGVSPRSFEAALLAAGSLIDLCDRAMIGHFYN----GMALVRPPGHHATPDRAMGFCLFN 137
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVA+AA + A GL+RV I+D+DVHHGNGT D FY + + + STHQ YPG+G +
Sbjct: 138 NVAVAAAHLIEARGLERVLIVDWDVHHGNGTEDTFYSEGRVMYFSTHQSPMYPGSGPVSA 197
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
VG G GEG T+N P+ G GD VF +++ P A+ FKP ILVSAG+DAH DPL
Sbjct: 198 VGSGAGEGRTVNAPMSAGRGDLEYIRVFKDLLTPIARCFKPQFILVSAGFDAHHEDPLGG 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP----- 293
++ T+ + L + +L+ + C R V LEGGY +++L+ SV G
Sbjct: 258 MRITSSGFAALTQILMELSSEFCPGRLVLTLEGGYAVSALARSVLACLDVLAGRREDELI 317
Query: 294 SKASEFDNPAIL 305
++A+E + P I+
Sbjct: 318 AQAAEVEPPRII 329
>gi|86136866|ref|ZP_01055444.1| histone deacetylase family protein [Roseobacter sp. MED193]
gi|85826190|gb|EAQ46387.1| histone deacetylase family protein [Roseobacter sp. MED193]
Length = 309
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 161/277 (58%), Gaps = 16/277 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ +H ++ L A +G ++G T+ + T + AGA + V
Sbjct: 47 AAEDDVLRIHPVDHLRTLRSAH---PSEGYTQVDGD--TFMSPGTLDAAFRGAGAAVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + FA IRPPGHHA + MGFC FGN A+AA++A HGLKRV ++D
Sbjct: 102 DMVLGGQAQN----AFAAIRPPGHHAETETAMGFCFFGNAALAAKHALDHHGLKRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+P F+S+ Q +PG+G+ DE G G +N+PLP SG T
Sbjct: 158 FDVHHGNGTQDLLWDEPRALFISSQQMPLWPGSGRPDEDG---AHGQIVNMPLPPESGGT 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
MR + P + FKP+LI++SAG+DAH DPLASL ++T + L A + LA++L
Sbjct: 215 EMRAAYEGQAFPRLRAFKPELIIISAGFDAHRDDPLASLNWSTEDFAWLTAELCVLAEEL 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
C R V LEGGY+L +L A + RA + E KA+
Sbjct: 275 CQGRIVSTLEGGYDLKAL----AQATRAHVKELIKAA 307
>gi|448497564|ref|ZP_21610517.1| histone deacetylase superfamily protein [Halorubrum coriense DSM
10284]
gi|445699795|gb|ELZ51815.1| histone deacetylase superfamily protein [Halorubrum coriense DSM
10284]
Length = 334
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 166/314 (52%), Gaps = 27/314 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA + +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEADPAEKAAVTAVHDSGYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAG A A +++ + R P FA+ RPPGHHA+ MGFC F N A+AA+ A
Sbjct: 88 ALTAAGLAQWAAREALDGATGRQTP---FAIGRPPGHHAVTDDAMGFCFFNNAAVAAQTA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G GDGEG+
Sbjct: 145 IDEDLADRVAIFDWDVHHGNGTQDIFYDSGDVFYASIHEDGLYPDTGALDETGEGDGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E I P RF PDL +VSAG+DA DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEGIAPAVDRFDPDLFIVSAGFDARRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ G+ + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRTLADDV-GAADAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVDTDE 315
Query: 308 EPSAKVKQAIERVK 321
EP K + ++ ++
Sbjct: 316 EPDGKTETLVDDLR 329
>gi|422002105|ref|ZP_16349343.1| histone deacetylase [Leptospira santarosai serovar Shermani str. LT
821]
gi|417259037|gb|EKT88416.1| histone deacetylase [Leptospira santarosai serovar Shermani str. LT
821]
Length = 313
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH+ A++ +E++ ++G T T ++ + +AA +GI L D++ +
Sbjct: 61 VHSNAHLQKIERS---KGKRGYF----DSDTPFTEKSWISAYSAANSGITLADALLSGTI 113
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ GF+L+RPPGHHA MGFC+ NVAI ARY Q+ +G K++FIID+DVHHGNG
Sbjct: 114 KN----GFSLLRPPGHHAERNRIMGFCILNNVAITARYLQK-NGFKKIFIIDWDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T + FY DP++F+LS HQ YP TG E G+ +G G+T N+P+ S + + F E
Sbjct: 169 TQEIFYQDPNVFYLSIHQFPFYPMTGLSSEAGKDEGIGTTKNIPMQANSENQSYIQKFKE 228
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P + F PD++L+SAG+DAH DPL + TT + L + + A +CG + + F
Sbjct: 229 VVIPTMEHFGPDIVLLSAGFDAHKEDPLGGMNITTKGFEDLTKIVLESADKICGGKVLSF 288
Query: 269 LEGGYNLNSLSYSV 282
LEGGY+L +LS SV
Sbjct: 289 LEGGYDLTALSESV 302
>gi|118594918|ref|ZP_01552265.1| histone deacetylase family protein [Methylophilales bacterium
HTCC2181]
gi|118440696|gb|EAV47323.1| histone deacetylase family protein [Methylophilales bacterium
HTCC2181]
Length = 346
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 153/256 (59%), Gaps = 9/256 (3%)
Query: 29 VHARAYVSGLEKAMD--RASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAAS 86
VH + Y+ + K + +A++ + +G + + + A G+ I V+ + +
Sbjct: 86 VHTKKYIDQIAKEISTLKATETAYL---STGDVVISRNSDMAARVAVGSVIEGVNQIMTN 142
Query: 87 KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHG 146
FAL+RPPGHHA MGFC++ N+AIAARY Q+ GL+R+ I+DFDVHHG
Sbjct: 143 VASS----AFALVRPPGHHASSDKGMGFCIYNNIAIAARYLQQQFGLERILIVDFDVHHG 198
Query: 147 NGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVF 206
NGT D FY+DP +F+ S HQ YPGTG E+G G GEG TLN+ LP GS D + F
Sbjct: 199 NGTQDIFYEDPSVFYFSVHQHPLYPGTGSPQEIGSGKGEGYTLNVELPRGSNDRDLVNAF 258
Query: 207 HEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCV 266
++ +V +++KP+ ILVSAG+D H DPL L ++ Y +A + L+++ + +
Sbjct: 259 NDRLVSAMKKYKPEFILVSAGFDGHHNDPLGELSYSPRGYQGVAKVLSNLSREHAKEKIM 318
Query: 267 FFLEGGYNLNSLSYSV 282
+ +EGGY+ +++S S+
Sbjct: 319 YVVEGGYSYDNMSQSI 334
>gi|78486126|ref|YP_392051.1| histone deacetylase superfamily protein [Thiomicrospira crunogena
XCL-2]
gi|78364412|gb|ABB42377.1| Histone deacetylase family protein [Thiomicrospira crunogena XCL-2]
Length = 379
Score = 204 bits (518), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 113/275 (41%), Positives = 154/275 (56%), Gaps = 7/275 (2%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ H ++Y+ +E D G G TY A++F + AAG+ I L
Sbjct: 85 ATNEELLLAHTQSYIDEIEILSDSG---GGFYEPYQGDTYLNASSFDAAKMAAGSNINL- 140
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
++A + D GFAL+RPPGHHA+ MGFC+F + IAAR Q+ G+KR+ IID
Sbjct: 141 -NLAIYDRKIDH--GFALLRPPGHHALQNKAMGFCIFNSDIIAARALQKYRGVKRIAIID 197
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +DP I +S HQ +P TG G+ +G+ +N P P G+GD
Sbjct: 198 FDVHHGNGTQDLSDNDPSIMSISIHQHPFWPMTGGHTFTGKDKAKGTVVNCPFPKGAGDQ 257
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
V+ +VI P + FKP+ I+V AGYDAH DPLA Q + + L + AK+L
Sbjct: 258 TYLNVYDQVIHPKLEAFKPEHIIVFAGYDAHWQDPLAQHQVSVAGFNQLVDKCLKSAKEL 317
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
CG R F L GGYNLN L+ +F LG P K
Sbjct: 318 CGGRISFSLGGGYNLNPLAQCAVGTFHTLLGNPEK 352
>gi|448543520|ref|ZP_21625074.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-646]
gi|448550612|ref|ZP_21628915.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-645]
gi|448559158|ref|ZP_21633410.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-644]
gi|445706243|gb|ELZ58126.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-646]
gi|445711117|gb|ELZ62911.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-645]
gi|445711528|gb|ELZ63319.1| HdaI-type histone deacetylase [Haloferax sp. ATCC BAA-644]
Length = 337
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 171/318 (53%), Gaps = 25/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E + SPA +A+VH YV + ++G G T A ++
Sbjct: 38 VEYVDASPAEKSTVAAVHDDGYVDEFHE----------FCLDGGGNWDPDTVAVEASWDA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L +AG + + D P F+L RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALTSAGLAEWAARTALDGDDGRDTP--FSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVI 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG++DE G GDGEG+T
Sbjct: 146 DDGLAERVAIFDWDVHHGNGTQDIFYDRGDVFYTSIHEDGLYPGTGEVDETGEGDGEGTT 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+PL G+GD F E I P +RF PDL +VSAG+DAH DP++ ++ +T Y M
Sbjct: 206 LNVPLHAGAGDADYVYSFDEAIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAM 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L +++L ++ + F LEGGY L++LS VA F G + E E+
Sbjct: 266 LTECVQELCEE-TDTAIAFVLEGGYGLDTLSEGVATVHETFDGRIAMDPE--------ED 316
Query: 309 PSAKVKQAIERVKHIHSL 326
P K + ++ V+ H L
Sbjct: 317 PDEKNVELVDDVRAAHGL 334
>gi|404317416|ref|ZP_10965349.1| histone deacetylase superfamily protein [Ochrobactrum anthropi
CTS-325]
Length = 316
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 156/298 (52%), Gaps = 23/298 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV-------HARAYVSGL-EKAMDRASQQGIILIE 54
L SE G + L A D ASV H A +G+ E A D A+ ++ ++
Sbjct: 30 LMSELEGPDFYRLDRVE-ALRGDEASVLLAHPEKHLEAIRAGIPEPASDEAAPAPVVKLD 88
Query: 55 GSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPM 112
G TY + + +L A GA A VD V A+ N F RPPGHHA M
Sbjct: 89 GD--TYVSPKSLDAALTAIGAATAAVDDVFSGAANNV------FVAARPPGHHAERSTAM 140
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG 172
GFC+F N+AIAAR+AQR HG +RV I+D+DVHHGNGT D F DDP + F STHQ YPG
Sbjct: 141 GFCLFNNIAIAARHAQRHHGAERVAIVDWDVHHGNGTQDIFKDDPSVLFCSTHQFPLYPG 200
Query: 173 TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
TG DE G G+ N PL +G R F+ ++P F+PDLIL+SAG+DAH
Sbjct: 201 TGSKDETGVGN----IFNAPLSPDTGSREFREAFNSRVLPALDNFRPDLILISAGFDAHF 256
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
DPLA L + + + A+ C R V LEGGY+L LS S + L
Sbjct: 257 RDPLAELNLDEADFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSASTHITRLL 314
>gi|456865517|gb|EMF83851.1| histone deacetylase family protein [Leptospira weilii serovar Topaz
str. LT2116]
Length = 316
Score = 203 bits (517), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 141/221 (63%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L D++ + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 87 TEKSWIAAYSAANSGIILADALLSGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 142
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q+ +G K++FIID+DVHHGNGT + FY DP++F+LS HQ YP TG E G+
Sbjct: 143 ITARYLQK-NGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGK 201
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
+G G+T N+P+ S + A F EV++P + F PD++L+SAG+DAH DPL +
Sbjct: 202 NEGIGTTKNIPMQANSDNQAYIQKFKEVVIPTMENFGPDIVLISAGFDAHKEDPLGGMNI 261
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L + + A +C + + FLEGGYNL +LS SV
Sbjct: 262 TTKGFEDLTKIVLESADKICEGKVLSFLEGGYNLTALSESV 302
>gi|194763445|ref|XP_001963843.1| GF21044 [Drosophila ananassae]
gi|190618768|gb|EDV34292.1| GF21044 [Drosophila ananassae]
Length = 1142
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 121/334 (36%), Positives = 177/334 (52%), Gaps = 19/334 (5%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
++ E+ E ++ + A+ D+I H R++V+ + + + R ++ L Y
Sbjct: 576 QMHKEYALLERMKQLSARAATTDEICLAHTRSHVNSVRRLLGRDPEELHQLGSTYNSVYL 635
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
TF + AAG+ + VDSV ++R G +RPPGHHA P P GFC+F NVA
Sbjct: 636 HPRTFDCATLAAGSVLQAVDSVLRGESRS----GICNVRPPGHHAEPDQPHGFCIFNNVA 691
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPG--TGKI 176
IAA+YA R +GL+RV I+D+DVHHGNGT F +P + ++S H+ +P G
Sbjct: 692 IAAQYAIRDYGLQRVLIVDWDVHHGNGTQHIFESNPKVLYVSVHRYEHGAFFPKGPDGNF 751
Query: 177 DEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
D VG+G G G +N+P G GD F +VI+P A F P L+LVSAG+DA + DP
Sbjct: 752 DVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQVIMPIAYEFNPQLVLVSAGFDAAIGDP 811
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
L + T Y ML + LA G + V LEGGYN+NS+SY++ + LG+P
Sbjct: 812 LGGCKVTPEGYGMLTHWLSALA----GGKIVVCLEGGYNVNSISYAMTMCTKTLLGDPVP 867
Query: 296 -----ASEFDNPAILYEEPSAKVKQAIERVKHIH 324
A+ PA + + + QA V+ H
Sbjct: 868 TPQLGAASLQKPATVAYQSCIETLQACLEVQRAH 901
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 139/245 (56%), Gaps = 18/245 (7%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +TF+ SL A G+ I LVD + A + G A+IRPPGHHA+ G+C F N
Sbjct: 201 YIHPSTFELSLLATGSTIELVDQLIAGSAQN----GMAIIRPPGHHAMKAEFNGYCFFNN 256
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDP----DIFFLSTH--QDGS-YPG 172
VA+AA++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P
Sbjct: 257 VALAAQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRQVNTVLYFSIHRFEYGSFWPH 316
Query: 173 TGKID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
+ D +G G G G T N+PL G + +F ++++P A F+P+LI+VSAGYD
Sbjct: 317 LHESDYHAIGSGPGTGYTFNVPLNSTGMTNGDYLAIFQQLLLPVALEFQPELIMVSAGYD 376
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
A + P ++ T Y L + +LA S+ LEGGY L+SL+ A + R+
Sbjct: 377 AALGCPEGEMEVTPACYPHLLNPLLRLAD----SKVAVVLEGGYCLDSLAEGAALTLRSL 432
Query: 290 LGEPS 294
LG+P
Sbjct: 433 LGDPC 437
>gi|399155693|ref|ZP_10755760.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
SCGC AAA001-C10]
Length = 315
Score = 203 bits (516), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 156/276 (56%), Gaps = 11/276 (3%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E + L++ A+ +I +H+ +S +E A + ++ + +A TF +
Sbjct: 40 ERLILQSGRSATSQEIKLLHSEKLISAVEAAAESGAR-----TLHTPDCIISAQTF--NA 92
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AA G L + ++ R D F +RPPGHHA MGFC F N+A+AA + R
Sbjct: 93 AAHAVGSVLDGVIEVAERRLDN--AFCSVRPPGHHAENDSAMGFCFFNNIALAAEFLTRE 150
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGST 188
G KRV I DFDVHHGNGT F + DIFF S HQD S+PGTG E G G G G T
Sbjct: 151 MGFKRVLIFDFDVHHGNGTQHFFEERADIFFASIHQDPRTSFPGTGFAHERGSGGGAGFT 210
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+P+P G GD +F++ + P + +KPD +LVSAG+DAH DPLASL T T+
Sbjct: 211 LNVPVPPGMGDEEYLQIFYDQVQPKLEEYKPDFVLVSAGFDAHRDDPLASLNLTERTFRE 270
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVAD 284
L +KQLA+ G R + LEGGY+LN+LS V +
Sbjct: 271 LTRELKQLAEQYAGGRIMSLLEGGYDLNALSSCVQE 306
>gi|225848632|ref|YP_002728795.1| histone deacetylase 14 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644094|gb|ACN99144.1| histone deacetylase 14 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 306
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/279 (42%), Positives = 161/279 (57%), Gaps = 17/279 (6%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+L + SP A+V +I +H Y ++ MD S G L T+ ++ ++
Sbjct: 41 KLVHISPRRATVKEITLIHDTYYP---QEIMDFCSAGGGYL---DPDTHVGIHSYDAAVM 94
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A GAG+ VD + +++ F +RPPGHHA MGFC+F N+AI ARYAQ +
Sbjct: 95 AVGAGLQAVDKILSNEVE----RVFCAVRPPGHHAEKDKAMGFCIFNNIAITARYAQ-SK 149
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
G K+VFIIDFD HHGNGT AFYDD +F+ STH+ YPGTG DE G G G G T N+
Sbjct: 150 GFKKVFIIDFDAHHGNGTQKAFYDDDTVFYFSTHEYPFYPGTGSKDEKGVGKGYGYTYNV 209
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP G+GD ++ E + P + F PD+ILVSAGYD H DPL L+ +T +
Sbjct: 210 PLPAGTGDDVYLQIYQEELPPLVKSFDPDIILVSAGYDLHEDDPLTYLEVSTEGIGKIVE 269
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+I QL KD+ +F LEGGYNL+++ SV + L
Sbjct: 270 SILQL-KDV---PYIFMLEGGYNLDAIGESVKLTIEKML 304
>gi|417781233|ref|ZP_12428985.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
gi|410778484|gb|EKR63110.1| histone deacetylase family protein [Leptospira weilii str.
2006001853]
Length = 321
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 140/221 (63%), Gaps = 5/221 (2%)
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T ++ + +AA +GI L D++ + + GF+L+RPPGHHA MGFC+ NVA
Sbjct: 95 TEKSWIAAYSAANSGITLADALLSGTIKN----GFSLLRPPGHHAEHNRIMGFCMLNNVA 150
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
I ARY Q+ +G K++FIID+DVHHGNGT + FY DP++F+LS HQ YP TG E G+
Sbjct: 151 ITARYLQK-NGFKKIFIIDWDVHHGNGTQEIFYQDPNVFYLSIHQFPFYPMTGLSSETGK 209
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
+G +T N+P+ S A F EV++P + F PD++L+SAG+DAH DPL +
Sbjct: 210 NEGIETTKNIPMQANSDSQAYIQKFKEVVIPTMEHFGPDVVLISAGFDAHKEDPLGGMNI 269
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
TT + L + + A +CG + + FLEGGYNL +LS SV
Sbjct: 270 TTKGFEDLTKIVLESADKICGGKVLSFLEGGYNLTALSESV 310
>gi|114706806|ref|ZP_01439706.1| hypothetical protein FP2506_18359 [Fulvimarina pelagi HTCC2506]
gi|114537754|gb|EAU40878.1| hypothetical protein FP2506_18359 [Fulvimarina pelagi HTCC2506]
Length = 308
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/269 (41%), Positives = 145/269 (53%), Gaps = 13/269 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
+++ I H Y + KA+ ++G+ I+G T + +F +L A GA A VD
Sbjct: 51 ALESITRCHPHKYAEAVAKAI---PEEGLARIDGD--TIISPKSFTAALHAVGAATAAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
V A R F RPPGHHA MGFC+F AIAAR+AQ HGL RV I+D+
Sbjct: 106 GVVAGDCRN----AFVAARPPGHHAEKTTAMGFCLFNTAAIAARHAQSVHGLGRVAIMDW 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ DP + + STHQ YPGTG E GEG+ +N PL G G
Sbjct: 162 DVHHGNGTQDIFWSDPSVLYCSTHQMPLYPGTGAKSE----RGEGNIVNAPLVAGDGSEK 217
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F I+P F+PDLI++SAG+DAH DPLA+LQ + + + A C
Sbjct: 218 FREAFETRILPAIDEFEPDLIIISAGFDAHFRDPLANLQLSDSDFDWATGKLMDAAATHC 277
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY+L L+ SV + L
Sbjct: 278 DDRLVSVLEGGYDLQGLAVSVKAHVKRLL 306
>gi|359684037|ref|ZP_09254038.1| histone deacetylase [Leptospira santarosai str. 2000030832]
gi|410447986|ref|ZP_11302074.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|418744203|ref|ZP_13300559.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|418751647|ref|ZP_13307929.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|421111560|ref|ZP_15572034.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|409967950|gb|EKO35765.1| histone deacetylase family protein [Leptospira santarosai str.
MOR084]
gi|410018191|gb|EKO80235.1| histone deacetylase family protein [Leptospira sp. Fiocruz LV3954]
gi|410794654|gb|EKR92554.1| histone deacetylase family protein [Leptospira santarosai str.
CBC379]
gi|410802969|gb|EKS09113.1| histone deacetylase family protein [Leptospira santarosai str. JET]
gi|456876209|gb|EMF91332.1| histone deacetylase family protein [Leptospira santarosai str.
ST188]
Length = 313
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 156/254 (61%), Gaps = 12/254 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
+H+ A++ +E++ ++G T T ++ + +AA +GI L D++ +
Sbjct: 61 IHSNAHLQKIERS---KGKRGYF----DSDTPFTEKSWIAAYSAANSGITLADALLSGTI 113
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ GF+L+RPPGHHA MGFC+ NVAI ARY Q+ +G K++FIID+DVHHGNG
Sbjct: 114 KN----GFSLLRPPGHHAERNRIMGFCILNNVAITARYLQK-NGFKKIFIIDWDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T + FY DP++F+LS HQ YP TG E G+ +G G+T N+P+ S + + F E
Sbjct: 169 TQEIFYQDPNVFYLSIHQFPFYPMTGLSSEAGKDEGIGTTKNIPMQANSDNQSYIQKFKE 228
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
V++P + F PD++L+SAG+DAH DPL + TT + L + + A +CG + + F
Sbjct: 229 VVIPTMEHFGPDIVLLSAGFDAHKEDPLGGMNITTKGFEDLTKIVLESADKICGGKVLSF 288
Query: 269 LEGGYNLNSLSYSV 282
LEGGY+L +LS SV
Sbjct: 289 LEGGYDLTALSESV 302
>gi|448407831|ref|ZP_21574026.1| histone deacetylase superfamily protein [Halosimplex carlsbadense
2-9-1]
gi|445675081|gb|ELZ27616.1| histone deacetylase superfamily protein [Halosimplex carlsbadense
2-9-1]
Length = 338
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/288 (40%), Positives = 162/288 (56%), Gaps = 19/288 (6%)
Query: 10 SEIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATA 63
SE ++ SP A+V+ +A+VH YV +E +G G T A
Sbjct: 33 SECHGVRYVSPEDATVEQVAAVHDADYVQSVED----------FCADGGGDWDADTVAVE 82
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
T+ +LAA+G + D N D FAL RPPGHHA+ MGFC F +VA+A
Sbjct: 83 ATWDAALAASGMANWVADEALDGSNGRDTT--FALGRPPGHHAVYDDAMGFCFFNHVAVA 140
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
A++A G RV I+D+DVHHGNGT D F D D+FF+S H+DG YPGTG E+G GD
Sbjct: 141 AQHAIDDGGADRVAILDWDVHHGNGTQDIFDDREDVFFVSIHEDGIYPGTGDATEIGTGD 200
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
G+T+N+P P G+ + ++IVP + F PDL+LVSAG+DAH DP++ ++ +T
Sbjct: 201 ARGTTMNVPFPPGTTTSGYLAAVDDLIVPAFEAFDPDLVLVSAGFDAHEHDPISRMRVST 260
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
Y +LA + A D G+ F LEGGY L++L+ SV F G
Sbjct: 261 EGYGLLAQRVDAFA-DRIGAGLGFVLEGGYGLDTLTESVRTVHEVFDG 307
>gi|448427499|ref|ZP_21583814.1| histone deacetylase superfamily protein [Halorubrum terrestre JCM
10247]
gi|445678186|gb|ELZ30680.1| histone deacetylase superfamily protein [Halorubrum terrestre JCM
10247]
Length = 334
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 120/311 (38%), Positives = 168/311 (54%), Gaps = 27/311 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA + +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEAEPAEKAAVTAVHDPDYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A +++ R P FA+ RPPGHHA+ MGFC F N A+AA+ A
Sbjct: 88 ALTSAGLAQWAAREALTGLTGRQTP---FAVGRPPGHHAVTDDAMGFCFFNNAAVAAQTA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G GDGEG+
Sbjct: 145 LDEGLADRVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEDGLYPDTGDLDETGEGDGEGA 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E I P RF PDL++VSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEGIAPAVDRFDPDLLIVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ G+ + LEGGY L++L+ V+ + G A++ E
Sbjct: 265 LLTDRIRSLADDV-GAANAYVLEGGYGLDTLAEGVSMVHETYDGRMPVATD--------E 315
Query: 308 EPSAKVKQAIE 318
+P AK + ++
Sbjct: 316 DPDAKTETLVD 326
>gi|306842285|ref|ZP_07474947.1| histone deacetylase superfamily protein [Brucella sp. BO2]
gi|306287593|gb|EFM59044.1| histone deacetylase superfamily protein [Brucella sp. BO2]
Length = 316
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 119/290 (41%), Positives = 155/290 (53%), Gaps = 21/290 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV------HARAYVSGL-EKAMDRASQQGIILIEG 55
L SE G + L D+ A + H A S + E D + Q I+ ++G
Sbjct: 30 LMSELEGPDFYRLDRVEAPHADEAAILLAHPEEHLEAVRSKIPEPVEDGEAPQPIVKLDG 89
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
TY + + +L A GA IA VD+V A+ N F RPPGHHA MG
Sbjct: 90 D--TYISPKSMDAALTAIGAAIAAVDNVMSGAADNV------FVASRPPGHHAERSRAMG 141
Query: 114 FCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT 173
FCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DDP + F STHQ YPG+
Sbjct: 142 FCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDDPGVMFCSTHQFPLYPGS 201
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G E G G+ +N PL +G R F+ I+P F+PDLIL+SAG+DAH
Sbjct: 202 GDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDNFRPDLILISAGFDAHFR 257
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA + + + + A+ C R V LEGGY+L LS S +
Sbjct: 258 DPLAEINLDESDFDWATGKLMERAERFCNHRLVSVLEGGYDLEGLSQSAS 307
>gi|225851408|ref|YP_002731642.1| histone deacetylase 14 [Persephonella marina EX-H1]
gi|225645028|gb|ACO03214.1| histone deacetylase 14 [Persephonella marina EX-H1]
Length = 306
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 159/281 (56%), Gaps = 16/281 (5%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
+++E+K AS +I VH Y ++ MD S G L T + +++ +
Sbjct: 40 KDLVEIKP-RRASAKEITLVHDTYYP---QEIMDLCSAGGTYL---DPDTRCSIFSYEAA 92
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+ A GAG+ VDS+ K FA +RPPGHHA MGFC+F NVAI ARYAQ+
Sbjct: 93 VYAVGAGLEAVDSIMEGKVE----RVFANVRPPGHHAEFSKAMGFCIFNNVAITARYAQK 148
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
G +++FIIDFD HHGNGT AFYDD +F+ STHQ YPGTG +E G G G G T
Sbjct: 149 K-GYEKIFIIDFDAHHGNGTQKAFYDDDTVFYFSTHQYPFYPGTGSAEEKGVGKGLGFTY 207
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP G+GD ++ ++ F+PD++LVSAGYD H+ DPL L+ TT +
Sbjct: 208 NVPLPAGTGDETYEDIYSMMLPDLVYHFRPDMVLVSAGYDLHIDDPLTHLEVTTEGIGKI 267
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
NI + + S +F LEGGYNL +L S + + L
Sbjct: 268 VENILKTSD----SPFIFMLEGGYNLQALGKSALITVKKML 304
>gi|406830220|ref|ZP_11089814.1| histone deacetylase superfamily protein [Schlesneria paludicola DSM
18645]
Length = 312
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 111/283 (39%), Positives = 162/283 (57%), Gaps = 16/283 (5%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQ---QGIILIEGSGPTYATATTFQESL 70
+++ A+VD+IA +H RAY+ RA+Q G IE T+ + ++ +L
Sbjct: 42 QIRETRLATVDEIARIHDRAYIG-------RAAQFAKDGGGWIEAD--TFLSPKSYDVAL 92
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG I +D+V A PD L+RPPGHHA+ MGFC+F N+A+AA +A +
Sbjct: 93 RAAGTSIQAIDAVMAG---PDQQ-ALCLVRPPGHHALVHDAMGFCLFNNIALAADHAVKQ 148
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
H L+RV ++D+DVHHGNGT D FY+ D++FLS H+ YPGTG DE G G G+ N
Sbjct: 149 HKLRRVLVVDWDVHHGNGTQDIFYERDDVWFLSVHRSPFYPGTGMKDETGSRLGLGTKYN 208
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
LP+ G+ + F ++ A++ +P+L+L+SAG+DAH DP+ SL T + L
Sbjct: 209 LPVAFGTARKDYLSQFEAMLTDVAKKCQPELVLISAGFDAHAEDPIGSLGLETEDFGTLT 268
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ Q+A+ R V LEGGY++ L+ SVA L P
Sbjct: 269 HLVMQVAQTYSQGRLVSCLEGGYHVKRLAESVACHLTTLLANP 311
>gi|384261856|ref|YP_005417042.1| Histone deacetylase superfamily [Rhodospirillum photometricum DSM
122]
gi|378402956|emb|CCG08072.1| Histone deacetylase superfamily [Rhodospirillum photometricum DSM
122]
Length = 309
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 12/267 (4%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D + VH +++ + A+ R I T + + + +L AAG I VD V
Sbjct: 53 DQLQRVHPLSHIDAILDAVPREGHHHI-----DADTLISPESGEAALRAAGGVILAVDEV 107
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
R F IRPPGHHA MGFC+F N+A+ A +A+ G++R+ ++D+DV
Sbjct: 108 MRKAARN----AFVAIRPPGHHAELHTAMGFCLFNNIAVGAFHARAQWGVERIAVVDWDV 163
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT F+DDP++FF STH+ ++P TGK++E G + + +N PLP GSG A R
Sbjct: 164 HHGNGTQHIFWDDPNLFFASTHEANAFPYTGKVEETGSAN---NIVNCPLPAGSGGDAFR 220
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
E ++P + F+P+LIL+SAG+DAH +DP+A L F + I +A+ C S
Sbjct: 221 AACTERLLPALEAFRPELILISAGFDAHTMDPMADLNFKVADFAWATKQIMDIAERTCES 280
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFL 290
R + LEGGY+L +L+ VA RA +
Sbjct: 281 RVISVLEGGYDLTALASCVAVHVRALM 307
>gi|239831298|ref|ZP_04679627.1| histone deacetylase superfamily protein [Ochrobactrum intermedium
LMG 3301]
gi|239823565|gb|EEQ95133.1| histone deacetylase superfamily protein [Ochrobactrum intermedium
LMG 3301]
Length = 325
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 155/298 (52%), Gaps = 23/298 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV-------HARAYVSGL-EKAMDRASQQGIILIE 54
L SE G + L A D ASV H A +G+ E A D + ++ ++
Sbjct: 39 LMSELEGPDFYRLDRME-APRGDEASVLLTHPEEHLEAIRAGIPEPASDEEAAPPVVKLD 97
Query: 55 GSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPM 112
G TY + + +L A GA A VD V A+ N F RPPGHHA M
Sbjct: 98 GD--TYVSPKSLDAALTAIGAATAAVDDVFSGAANNV------FVAARPPGHHAERSTAM 149
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG 172
GFC+F N+AIAAR+AQR HG +R+ I+D+DVHHGNGT D F DDP + F STHQ YPG
Sbjct: 150 GFCLFNNIAIAARHAQRRHGAERIAIVDWDVHHGNGTQDIFKDDPSVLFCSTHQFPLYPG 209
Query: 173 TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
TG DE G G+ N PL +G R F+ ++P F+PDLIL+SAG+DAH
Sbjct: 210 TGAKDETGVGN----IFNAPLSPDTGSREFREAFNSRVLPALDNFRPDLILISAGFDAHF 265
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
DPLA L + + + A+ C R V LEGGY+L LS S + L
Sbjct: 266 RDPLAELNLDEADFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSASTHITRLL 323
>gi|443704447|gb|ELU01509.1| hypothetical protein CAPTEDRAFT_173494 [Capitella teleta]
Length = 365
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 170/313 (54%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEK--AMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
A+ D+++ VH Y+ L++ ++ S + IE P+Y + F S A G +
Sbjct: 59 ATDDELSLVHTAKYIEQLKQYGSLPAESMENPCKIEEKWPSYISNDVFISSSVAVGCALQ 118
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
L D+V +K + G A++RPPGHHA GFC F NVAIA RYAQ+ HGLKRV I
Sbjct: 119 LTDAVCTNKVKN----GVAVVRPPGHHAEVDESCGFCFFNNVAIATRYAQKKHGLKRVLI 174
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY-PG--TGKIDEVGRGDGEGSTLNLPL 193
+D+D+H GNG ++ F DDP + ++S H+ +G Y PG G I+ VG+ GEG ++N+
Sbjct: 175 VDWDIHFGNGIHNIFSDDPSVLYISLHRYDNGDYFPGLTEGCIESVGKNQGEGFSINVAW 234
Query: 194 PGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
GD+ + F +++P A +F PDLI+V+AG+DA V DPL TT Y +
Sbjct: 235 NKDIMGDSEYKRAFDSIVMPAANQFNPDLIIVAAGFDAVVSDPLGDYVLTTDMYAYMTQK 294
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ ++ R + LEGGYN +++ + R +G+ + D +EP +
Sbjct: 295 LLRIGT----GRVILMLEGGYNAHAIGDCLVACTRVLMGDKDQRINLD-----IKEPCRR 345
Query: 313 VKQAIERVKHIHS 325
Q I+RV HS
Sbjct: 346 ALQTIQRVIQCHS 358
>gi|444308780|ref|ZP_21144422.1| histone deacetylase superfamily protein [Ochrobactrum intermedium
M86]
gi|443487828|gb|ELT50588.1| histone deacetylase superfamily protein [Ochrobactrum intermedium
M86]
Length = 316
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 155/298 (52%), Gaps = 23/298 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV-------HARAYVSGL-EKAMDRASQQGIILIE 54
L SE G + L A D ASV H A +G+ E A D + ++ ++
Sbjct: 30 LMSELEGPDFYRLDRME-APRGDEASVLLTHPEEHLEAIRAGIPEPASDEEAAPPVVKLD 88
Query: 55 GSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPM 112
G TY + + +L A GA A VD V A+ N F RPPGHHA M
Sbjct: 89 GD--TYVSPKSLDAALTAIGAATAAVDDVFSGAANNV------FVAARPPGHHAERSTAM 140
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG 172
GFC+F N+AIAAR+AQR HG +R+ I+D+DVHHGNGT D F DDP + F STHQ YPG
Sbjct: 141 GFCLFNNIAIAARHAQRRHGAERIAIVDWDVHHGNGTQDIFKDDPSVLFCSTHQFPLYPG 200
Query: 173 TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
TG DE G G+ N PL +G R F+ ++P F+PDLIL+SAG+DAH
Sbjct: 201 TGAKDETGVGN----IFNAPLSPDTGSREFREAFNSRVLPALDNFRPDLILISAGFDAHF 256
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
DPLA L + + + A+ C R V LEGGY+L LS S + L
Sbjct: 257 RDPLAELNLDEADFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSASTHITRLL 314
>gi|374998259|ref|YP_004973758.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
lipoferum 4B]
gi|357425684|emb|CBS88580.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
lipoferum 4B]
Length = 309
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 117/285 (41%), Positives = 158/285 (55%), Gaps = 15/285 (5%)
Query: 6 EFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
EFR +E ++ A VD ++ VH R YV + A+ +G ++G T + +
Sbjct: 38 EFRA---LERRSAPKADVDQLSRVHDRQYVEAVLAAV---PDEGYRRLDGD--TLLSPGS 89
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
L AAG+ A VD+V A + F +RP GHHA P MGFCVF N+A+ A
Sbjct: 90 RGAILRAAGSVCAAVDAVLAGEATN----AFCAVRPCGHHAEPARAMGFCVFNNIAVGAE 145
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+A++ HGL RV ++DFDVHHGNGT F DDPD+FF STHQ YPGTG E G +
Sbjct: 146 HARKIHGLTRVAVVDFDVHHGNGTQAMFADDPDLFFASTHQSPLYPGTGNSWERGV---D 202
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+ LNLPL SG R I+P + F+P+L+L+SAG+DAH DPLA L T
Sbjct: 203 GNILNLPLEPYSGSVEFRQAVERAILPALEAFQPELLLISAGFDAHKRDPLAQLGLTNED 262
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ + + LA +CG R V LEGGY+ L+ A +A +
Sbjct: 263 FEWVTRKLVDLADRVCGGRVVSALEGGYDATGLAEGCAAHLKALM 307
>gi|448303726|ref|ZP_21493675.1| histone deacetylase [Natronorubrum sulfidifaciens JCM 14089]
gi|445593511|gb|ELY47689.1| histone deacetylase [Natronorubrum sulfidifaciens JCM 14089]
Length = 340
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 162/288 (56%), Gaps = 20/288 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P ++ +A+VH RAY+ +E+ +G G T +E+ A
Sbjct: 38 VEYVEADPCDIETMATVHERAYLESVEQ----------FCADGGGNWDPDTTAVEETWDA 87
Query: 73 ----AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
AG VD+ + + P F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 VRHSAGLACWAVDAALEGDSGRETP--FSIGRPPGHHAVYDDAMGFCFVNNVAVAAQHAL 145
Query: 129 RA--HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
A H + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G G G+G
Sbjct: 146 DADEHDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEQGLYPGTGAIDETGEGAGDG 205
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+T+N+P+P G+ D + +V F PD +L+SAG+DAH DP++ ++ +T Y
Sbjct: 206 TTMNVPMPAGTDDQDYLSAVEGPVVSALSAFDPDCLLISAGFDAHRHDPISRIRLSTEAY 265
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
++ ++ LA D+ + F LEGGY L+ L+ SVA F G EP
Sbjct: 266 ALMTDRLRTLADDV-DAALAFVLEGGYGLDVLADSVAIVHETFDGREP 312
>gi|288931038|ref|YP_003435098.1| histone deacetylase [Ferroglobus placidus DSM 10642]
gi|288893286|gb|ADC64823.1| Histone deacetylase [Ferroglobus placidus DSM 10642]
Length = 359
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 168/324 (51%), Gaps = 23/324 (7%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E I L N PA +D+ VH R Y+ L+ A + G I + + P F+ ++
Sbjct: 43 ERIVLINPEPAKEEDVLRVHTREYIEFLKAA---SKTGGFIDFDTNVPV----GLFEVAM 95
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG I V K R FA++RPPGHHA P GFC NVA+ + +R
Sbjct: 96 LAAGGAIKAAKYVVEGKVRN----AFAMVRPPGHHAKPYTGAGFCYINNVAVMVEWLKR- 150
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
G KR+ I+D+D HHG+GT + FY+D + F+STHQ YPGTG EVG+G GEG T+N
Sbjct: 151 RGFKRILILDWDAHHGDGTQEIFYEDDSVLFISTHQMPLYPGTGYPHEVGKGRGEGYTIN 210
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G+ D + VF +VI P A+ FKP+ I +SAG D H DPL L T Y +
Sbjct: 211 IPLPPGTSDESYLYVFEKVIEPVAEEFKPEFIAISAGQDNHFTDPLTGLALTARGYAEMM 270
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNS-LSYSVADSFRAFLGEPSKASEFDNPAILYEE- 308
LA+ LC R V LEGGY++ S L Y+ A G S PA + E
Sbjct: 271 KRAVDLAEKLCKGRLVAVLEGGYSVESALPYTNLGIIAALAG--MDISNIREPAKILSEL 328
Query: 309 -------PSAKVKQAIERVKHIHS 325
S KV+ + V+ IHS
Sbjct: 329 RWRKRDYASQKVRDTVAEVRSIHS 352
>gi|346995047|ref|ZP_08863119.1| histone deacetylase family protein [Ruegeria sp. TW15]
Length = 308
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 167/278 (60%), Gaps = 16/278 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ VH ++++S + +D+ G I+G T+ + + + AAGA + V
Sbjct: 47 AADDDLLRVHPQSHISDI---LDQRPSDGFKQIDGD--TFMSPGSVDAAYRAAGAVVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + P F IRPPGHHA + MGFC+FGN A+AA++A HGL RV ++D
Sbjct: 102 DLVLGGE----APNAFCAIRPPGHHAETEAAMGFCLFGNAALAAKHALDHHGLNRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+ +++ Q +PG+G+ DE G + + LN+PL G+G
Sbjct: 158 FDVHHGNGTQDLLWDEKRALVITSQQMPLWPGSGRTDETGAYE---TVLNIPLAPGTGGA 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
MR + P + FKP+LI+VSAG+DAH DPLA+L ++TG + + A + ++A ++
Sbjct: 215 EMRAAYEAQAFPRLRAFKPELIIVSAGFDAHQDDPLANLNWSTGDFAWITAELCKIADEV 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
C R V LEGGY+LN+L A++ RA + E KA++
Sbjct: 275 CDGRIVSTLEGGYDLNAL----AEATRAHVEELMKAAQ 308
>gi|365858667|ref|ZP_09398586.1| histone deacetylase family protein [Acetobacteraceae bacterium
AT-5844]
gi|363713794|gb|EHL97366.1| histone deacetylase family protein [Acetobacteraceae bacterium
AT-5844]
Length = 310
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F RPPGHHA P+ MGFC+FGN IAAR+AQRAHGL RV I+DFDVHHGNGT A +D
Sbjct: 118 FCATRPPGHHAEPRRAMGFCLFGNAVIAARHAQRAHGLGRVAILDFDVHHGNGTQAAVWD 177
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP I F S+HQ YP TG +E G G+ N LP G+ TA R + + ++P +
Sbjct: 178 DPTILFASSHQSPCYPYTGAEEERG---AAGNIFNATLPPGADGTAFRAAWAQRLLPAVE 234
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F P+L+++SAG+DAH DPLA L+ + L I ++A LCG R V LEGGY+L
Sbjct: 235 AFAPELLVISAGFDAHARDPLAQLRVREADFGWLTDEICRIADRLCGGRVVSLLEGGYDL 294
Query: 276 NSLSYSVADSFRAFLG 291
+L+ S A RA +G
Sbjct: 295 EALAASTAAHLRALMG 310
>gi|298251905|ref|ZP_06975708.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
gi|297546497|gb|EFH80365.1| Histone deacetylase [Ktedonobacter racemifer DSM 44963]
Length = 378
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 161/273 (58%), Gaps = 6/273 (2%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ +++ + H Y+ G+ +A + E T + +F+ +L AAG +
Sbjct: 68 PATREELTAFHTPEYIEGI-RAFSQGGPDHGPWGEVDEETMLSPGSFEAALYAAGGALNA 126
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V +V R + L+RPP HHA +GFCVF N A+AA YA+ GLKR+ I+
Sbjct: 127 VQAVMDGTVRN----CYGLLRPPCHHATSNKALGFCVFNNTALAAYYARNVFGLKRILIV 182
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+D HHGNGT +AFYDDP + FLS HQ +P +G +++VGRG G G T+N+PLP G+G
Sbjct: 183 DWDAHHGNGTQEAFYDDPGVLFLSMHQQNWFPKDSGTLEQVGRGAGVGYTVNIPLPPGTG 242
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D R +F +++VP ++F+P+LILV+AG DA LDPL +L + + ++ ++ LA+
Sbjct: 243 DRGYRELFEQLVVPIGRQFQPELILVTAGQDASWLDPLTTLMMSMDGFRAISQSLVDLAE 302
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++CG R V GGY+ + Y A + LG
Sbjct: 303 EVCGGRLVMLQAGGYSSAYVPYCTAAALEPLLG 335
>gi|292654693|ref|YP_003534590.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
gi|448293298|ref|ZP_21483406.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
gi|291371898|gb|ADE04125.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
gi|445571332|gb|ELY25885.1| HdaI-type histone deacetylase [Haloferax volcanii DS2]
Length = 337
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 172/319 (53%), Gaps = 27/319 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E + SPA +A+VH YV + +G G T A ++
Sbjct: 38 VEYVDASPAEKSTVAAVHDDGYVDEFHE----------FCRDGGGNWDPDTVAVEASWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A ++ R P F+L RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALTSAGLAEWAARAALDGDDGRNTP---FSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAV 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG++DE G GDGEGS
Sbjct: 145 IDDGLAERVAIFDWDVHHGNGTQDIFYDRGDVFYTSIHEDGLYPGTGEVDETGEGDGEGS 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
TLN+PL G+GD F E I P +RF PDL +VSAG+DAH DP++ ++ +T Y
Sbjct: 205 TLNVPLHAGAGDADYVYSFDEAIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
ML +++L ++ + F LEGGY L++LS VA F G + E E
Sbjct: 265 MLTECVQELCEE-TDAAIAFVLEGGYGLDTLSEGVATVHETFDGRIAMDPE--------E 315
Query: 308 EPSAKVKQAIERVKHIHSL 326
+P K + ++ V+ H L
Sbjct: 316 DPDEKNVELVDDVRAAHGL 334
>gi|373458090|ref|ZP_09549857.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
gi|371719754|gb|EHO41525.1| histone deacetylase superfamily [Caldithrix abyssi DSM 13497]
Length = 314
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 122/195 (62%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FA +RPPGHHA MGFCVF NVAIAAR AQR +++ IID+DVHHGNGT AFY+
Sbjct: 118 FAAVRPPGHHAERSRAMGFCVFNNVAIAARLAQREKFAEKILIIDWDVHHGNGTQHAFYE 177
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP +F+ S HQ +P TG +E G G G+G TLN+PL G GD +
Sbjct: 178 DPTVFYFSLHQYPLFPMTGLREETGSGPGKGFTLNVPLSYGQGDAEYVEHVERSLAAIES 237
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
RFKPDLIL+SAG+DAHV DP+ ++ TT +Y L + Q A C R + FLEGGY+L
Sbjct: 238 RFKPDLILISAGFDAHVKDPIGGMRLTTAGFYKLTEMVAQFANRYCTGRIISFLEGGYHL 297
Query: 276 NSLSYSVADSFRAFL 290
N+L+ SV L
Sbjct: 298 NALAESVHQHLVCML 312
>gi|153007886|ref|YP_001369101.1| histone deacetylase superfamily protein [Ochrobactrum anthropi ATCC
49188]
gi|151559774|gb|ABS13272.1| histone deacetylase superfamily [Ochrobactrum anthropi ATCC 49188]
Length = 316
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 154/291 (52%), Gaps = 23/291 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV---HARAYVSGL-----EKAMDRASQQGIILIE 54
L SE G + L A D ASV H ++ + E A D A+ ++ ++
Sbjct: 30 LMSELEGPDFYRLDRVE-APRGDEASVLLAHPEKHLEAIRAEIPEPASDEAAPAPVVKLD 88
Query: 55 GSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPM 112
G TY + + +L A GA A VD V A+ N F RPPGHHA M
Sbjct: 89 GD--TYVSPKSLDAALTAIGAATAAVDDVFSGAANNV------FVAARPPGHHAERSTAM 140
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG 172
GFC+F N+AIAAR+AQ+ HG +RV I+D+DVHHGNGT D F DDP + F STHQ YPG
Sbjct: 141 GFCLFNNIAIAARHAQQRHGAERVAIVDWDVHHGNGTQDIFRDDPSVLFCSTHQFPLYPG 200
Query: 173 TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
TG DE G G+ N PL +G R F+ ++P F+PDLIL+SAG+DAH
Sbjct: 201 TGSKDETGVGN----IFNAPLSPDTGSREFREAFNSRVLPALDNFRPDLILISAGFDAHF 256
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA L + + + A+ C R V LEGGY+L LS S +
Sbjct: 257 RDPLAELNLDEADFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSAS 307
>gi|157114211|ref|XP_001657988.1| histone deacetylase [Aedes aegypti]
gi|108883594|gb|EAT47819.1| AAEL001069-PA [Aedes aegypti]
Length = 1059
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 166/290 (57%), Gaps = 18/290 (6%)
Query: 12 IIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
+ +K P A+ ++ VH+R +V+ + + ++R + + + Y TF+ +
Sbjct: 501 LARMKRLKPRHATTTELCMVHSRQHVNVIRRTVEREEMKQVA--DQFNSVYFHPKTFECA 558
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
AAG+ + +VD V ++R G ++RPPGHHA P GFC+F NVAIAA+YA R
Sbjct: 559 TLAAGSVLQVVDEVLNGQSRS----GVCIVRPPGHHAESDMPHGFCIFNNVAIAAQYAIR 614
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGT--GKIDEVGRGDG 184
HGLKRV I+D+DVHHGNGT F DP + ++S H+ +G+ +P + D VG G G
Sbjct: 615 DHGLKRVLIVDWDVHHGNGTQHIFESDPRVLYISVHRYDNGTFFPKSTDANFDVVGSGSG 674
Query: 185 EGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
EG +N+P G GD F +VI+P A F P+L+LVSAG+DA + DPL + T
Sbjct: 675 EGFNVNIPWNKKGMGDQEYSAAFQQVILPVAYEFDPELVLVSAGFDAAIGDPLGGCKVTP 734
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
Y + LA R V LEGGYN+NS+S+++A ++ LG+P
Sbjct: 735 EAYGFFTHWLSSLA----NGRIVVCLEGGYNVNSISHAMALCTKSLLGDP 780
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 23/274 (8%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
+ +++ SL A G+ I LVD+V + + G A+IRPPGHHA+ G+C F
Sbjct: 122 VFVHPSSYDCSLLACGSTIELVDAVVGGRVQN----GMAIIRPPGHHAMKAEYNGYCFFN 177
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGK 175
NVAIAA++A GLK++ ++D+D+HHG GT FYDDP + + S H+ +P +
Sbjct: 178 NVAIAAQHALDRLGLKKILVVDWDIHHGQGTQRMFYDDPRVLYFSIHRYECGKFWPNLRE 237
Query: 176 --IDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D VG G G G N+PL G + ++ ++++P A F+P+L+L+SAGYDA
Sbjct: 238 SDFDYVGEGAGLGYNFNVPLNRIGMANGDYLAIWQQILLPVAMEFQPELVLISAGYDAAY 297
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + LA+ R LEGGY L+SL+ A + R LG+
Sbjct: 298 GCPEGQMEITPAFYPHLLTPLMSLAQ----GRVAVILEGGYCLSSLAEGGALTLRTLLGD 353
Query: 293 PSKASEFDNPAIL--YEEPSAKVKQAIERVKHIH 324
P P ++ + P ++Q I H H
Sbjct: 354 PC-------PLLVEKLQPPCESMQQTILNCIHTH 380
>gi|405375535|ref|ZP_11029564.1| Acetylspermidine deacetylase [Chondromyces apiculatus DSM 436]
gi|397086166|gb|EJJ17301.1| Acetylspermidine deacetylase [Myxococcus sp. (contaminant ex DSM
436)]
Length = 341
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 108/258 (41%), Positives = 150/258 (58%), Gaps = 12/258 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
++A+VH ++ L++ + +Q T + + + AAGA I V++V
Sbjct: 55 ELAAVHTPELLAYLQRLNGQKAQV-------DADTLVSPDSVDAARLAAGASIQAVEAVM 107
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ R FAL+RPPGHHA P MGFC+ N AIAA +R G +RV ++D+DVH
Sbjct: 108 KGEARN----AFALVRPPGHHAEPDKAMGFCLLNNAAIAAEAGRRL-GAERVLVLDWDVH 162
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNGT AF+ D+ + S HQ YPGTG DEVGRG GEG T+N+ LPGG+ D
Sbjct: 163 HGNGTQAAFWKRRDVMYQSVHQFPYYPGTGAADEVGRGPGEGYTVNVGLPGGNSDADYGM 222
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
+F E+++P A FKP LILVSAG+D+H DP+ + + + + + +K LA C R
Sbjct: 223 IFEELLLPVADAFKPQLILVSAGFDSHQHDPIGGMDVSERGFAAMCSAMKSLADSACDGR 282
Query: 265 CVFFLEGGYNLNSLSYSV 282
V LEGGY+L LS SV
Sbjct: 283 LVLLLEGGYSLEGLSQSV 300
>gi|94264760|ref|ZP_01288539.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
gi|93454806|gb|EAT05059.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
Length = 349
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 124/187 (66%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHHA GFC+F N+AIAA YA++ G KR+ I D+D+HHGNGT AF D
Sbjct: 117 FALVRPPGHHAEHDHSSGFCLFNNIAIAAHYARQKLGFKRILIFDWDLHHGNGTQHAFDD 176
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
+ FLSTHQ +PG+G + EVGRG GEG T+N+PLPGG D A + +E++VP A+
Sbjct: 177 SDQVLFLSTHQFPCFPGSGTLSEVGRGKGEGYTINVPLPGGQDDAAFARICNELLVPLAR 236
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
++P+LI+VSAG+D + DPL S+ + Y + + +LA LC R V LEGGYNL
Sbjct: 237 AYQPELIMVSAGFDTYAGDPLGSMMVSELGYAYMTRVLTELAAQLCQQRLVLVLEGGYNL 296
Query: 276 NSLSYSV 282
+ V
Sbjct: 297 GIMERGV 303
>gi|297570602|ref|YP_003691946.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
gi|296926517|gb|ADH87327.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
Length = 350
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 141/226 (62%), Gaps = 4/226 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHHA GFC+F N+A+AAR+A + HGL+RV I+D+D+HHGNGT AFYD
Sbjct: 118 FALVRPPGHHAEHDHTSGFCLFNNIAVAARHALKNHGLERVLIVDWDLHHGNGTQHAFYD 177
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
+ F STHQ +PG+G + E G+G GEG T+N+PL GG D A +F+E+++P A+
Sbjct: 178 TDQVLFFSTHQYPYFPGSGALSETGQGAGEGYTINVPLQGGQDDAAFARIFNELLIPVAE 237
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
+++P+LILVSAG+D + DPL ++ + Y L + LA LCG R LEGGY+L
Sbjct: 238 QYRPELILVSAGFDTYGGDPLGTMMVSEEGYAYLTGVLVDLAAGLCGGRLALMLEGGYDL 297
Query: 276 NSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVK 321
+ V A LGE + + E +A +A+E+ +
Sbjct: 298 GIMERGVL----ACLGELAGDQRLASARRRRLEQAAPPLRALEQAR 339
>gi|85705946|ref|ZP_01037042.1| histone deacetylase family protein [Roseovarius sp. 217]
gi|85669534|gb|EAQ24399.1| histone deacetylase family protein [Roseovarius sp. 217]
Length = 309
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 111/263 (42%), Positives = 153/263 (58%), Gaps = 12/263 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ VH ++++ + A + +G++ ++ T+ + T + A G + V
Sbjct: 47 AAEDDLLRVHPKSHLEAIRAA---SPVKGVVPLDAD--TWMSPGTLAAAHRAVGGAVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + R F RPPGHHA + MGFC+FGNVA+AA+YA HGLKRV ++D
Sbjct: 102 DLVLSGEVRN----AFVATRPPGHHAERETTMGFCLFGNVAVAAKYALDHHGLKRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D D+P FF S+HQ +PGTG E G D + LN+PL SG
Sbjct: 158 FDVHHGNGTQDLLEDEPRAFFASSHQYPLWPGTGAAHETGPHD---TILNVPLAPRSGGA 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R + + P + FKP+LILVSAG+DAH DPLA L T + + + LA +L
Sbjct: 215 VFRREYEAKVFPRVRAFKPELILVSAGFDAHREDPLADLMLETEDFRWVTERLCDLADEL 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVA 283
CG + V LEGGYNL +L+ SVA
Sbjct: 275 CGGKLVSCLEGGYNLYALAESVA 297
>gi|86139585|ref|ZP_01058153.1| histone deacetylase/AcuC/AphA family protein [Roseobacter sp.
MED193]
gi|85823768|gb|EAQ43975.1| histone deacetylase/AcuC/AphA family protein [Roseobacter sp.
MED193]
Length = 366
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 144/256 (56%), Gaps = 11/256 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA + IA VH +Y+SG+E+A E T+ F + + G IA+
Sbjct: 64 PAEISQIARVHPDSYISGIEEASKSGGA------EVGLNTFIGNEGFDIARVSTGGSIAI 117
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+D V + + G+AL+RPPGHHA P MGFC+F N +IA R Q + L RV I+
Sbjct: 118 MDGVLNGQMKN----GYALVRPPGHHARPTEAMGFCIFANASIAIREMQEKYQLDRVAIV 173
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+D HHGNG + FY+DP + +S HQD +P +G + +G G GEG+ +N+PLP GSG
Sbjct: 174 DWDAHHGNGAEEIFYEDPSVLTISLHQDNLFPLDSGAMSSIGEGRGEGNNINVPLPPGSG 233
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
A + F V++P Q +KP LI+V +G+DA LDPLA L + Y L + + A
Sbjct: 234 RGAYQAAFDRVVIPALQAYKPQLIVVCSGFDACGLDPLARLMLHSSVYANLTKQLMECAD 293
Query: 259 DLCGSRCVFFLEGGYN 274
DLC R EGGY+
Sbjct: 294 DLCQGRIAMLHEGGYS 309
>gi|337287253|ref|YP_004626726.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
gi|335360081|gb|AEH45762.1| histone deacetylase superfamily [Thermodesulfatator indicus DSM
15286]
Length = 347
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/305 (38%), Positives = 177/305 (58%), Gaps = 15/305 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ H+ YV K + + S Q + L T + +++ ++ A GA +
Sbjct: 51 ATFEELTWNHSPEYV----KTVQQTSGQSVQL---DADTATSPESYEAAIKAVGAQFVGL 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ + + + FAL+RPPGHHA MGFC+F NVA+AA YA + GLKR+ I+D
Sbjct: 104 DAIFSDQAKQ----VFALVRPPGHHAEYDRAMGFCLFNNVALAAHYALKKLGLKRILIVD 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+D+HHGNGT +FY ++ F S+HQ YPGTG ++E+G G+G+G T+N+PLP G GD
Sbjct: 160 WDLHHGNGTQKSFYHHREVLFFSSHQYPYYPGTGTVEEIGEGEGKGFTVNVPLPAGCGDL 219
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
TV+ ++++P A+RFKP+L+LVSAG+D + DPL +Q T LA +KQ+A
Sbjct: 220 EYATVYRQILLPIAERFKPELVLVSAGFDIYFGDPLGGMQVTPIGVAYLARLVKQIADKH 279
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERV 320
C R + LEGGY+L L ADS A L E + S + E + + + V
Sbjct: 280 CNGRLLLTLEGGYSLQGL----ADSLAAVLFELAGRSLIPTDKLEEMEEKDREPEVLNYV 335
Query: 321 KHIHS 325
K +H
Sbjct: 336 KAVHK 340
>gi|442323459|ref|YP_007363480.1| histone deacetylase [Myxococcus stipitatus DSM 14675]
gi|441491101|gb|AGC47796.1| histone deacetylase [Myxococcus stipitatus DSM 14675]
Length = 342
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 157/282 (55%), Gaps = 23/282 (8%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGII-----------LIEGSG-------PTY 60
SPA + I V ARA V G A R++ + L E SG T+
Sbjct: 24 SPARLQRILGVLARAPVRGTVMAPPRSATDAELAAVHTPQLLARLKELSGRRASIDPDTH 83
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+A + + AAGA + V+ V A K R FAL+RPPGHHA P MGFC+ N
Sbjct: 84 VSADSVDAARLAAGASVQAVEMVMAGKARN----AFALVRPPGHHAEPDRAMGFCLLNNA 139
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAA +R G +RV ++D+DVHHGNGT AF+ D+ + S HQ YPGTG EVG
Sbjct: 140 AIAAEAGRRL-GAERVLVLDWDVHHGNGTQAAFWGRRDVMYQSVHQFPYYPGTGATPEVG 198
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G GEG T+N+ LPGG+ D +F E+++P A+ F+P L+LVSAG+D H DP+ +
Sbjct: 199 TGAGEGYTVNVGLPGGNSDADYGMLFEELLLPVAESFRPQLVLVSAGFDPHYHDPIGGMD 258
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
T + + ++ LA+ +C + V LEGGY+L LS SV
Sbjct: 259 VTERGFAAMCTAMRSLAERVCDGKLVLLLEGGYSLEGLSQSV 300
>gi|144899349|emb|CAM76213.1| histone deacetylase superfamily [Magnetospirillum gryphiswaldense
MSR-1]
Length = 360
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/252 (39%), Positives = 149/252 (59%), Gaps = 7/252 (2%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFAL 98
++ MD +G + ++G T+ + + + +L +AGA IA VD VA ++R F
Sbjct: 114 DQVMDSIPAEGSVELDGD--TFVSPRSGEAALHSAGAAIAAVDEVATGRSRN----AFCA 167
Query: 99 IRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPD 158
RPPGHHA MGFC+F N AIAA +A+ HG KRV ++DFDVHHGNGT D +++P
Sbjct: 168 TRPPGHHAERNAIMGFCLFSNAAIAALHARDQHGFKRVAVVDFDVHHGNGTQDVLWNEPG 227
Query: 159 IFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFK 218
F+ S+HQD ++P TGK++EVG G + +N+PLP G+ R + ++I+P + F
Sbjct: 228 TFYASSHQDDAFPYTGKVEEVGPPGG-CTVVNVPLPAGTASDVFRAAYTDIILPKLEAFA 286
Query: 219 PDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSL 278
PD +++SAG+DAH DP+A L+ + L + +A+ R V LEGGY +L
Sbjct: 287 PDFLIISAGFDAHAADPMAHLRLQVADFEWLTQKLLGIARTHAQRRVVSVLEGGYETRAL 346
Query: 279 SYSVADSFRAFL 290
+ VA R +
Sbjct: 347 AACVAAHLRVLM 358
>gi|374573938|ref|ZP_09647034.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM471]
gi|374422259|gb|EHR01792.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM471]
Length = 309
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A G++ I+G T + T++ + G +A ++
Sbjct: 52 LDLVTLCHNEHYVTELRHI---APTSGLVYIDGD--TSMSPGTWEAVMRGVGGAVAATEA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V A ++R F +RPPGHHA PMGFC F NVAIAAR+AQR +G+KR I+DFD
Sbjct: 107 VMAGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNVAIAARHAQRKYGIKRAAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL G
Sbjct: 163 VHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKSE--RGDHD-TIVNAPLASEDGGPEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R F +I+P ++F P+L+++SAG+DAH DPLASL Y + + LA G
Sbjct: 220 RIAFENLILPQLEKFSPELLVISAGFDAHYRDPLASLNLRAEDYAWVTRKLMDLADKTAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SV A +G
Sbjct: 280 GRVVSVLEGGYDLQGLKESVTAHVGALMG 308
>gi|39934031|ref|NP_946307.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
CGA009]
gi|39647879|emb|CAE26398.1| possible histone deacetylase or acetylpolyamine aminohydrolase or
acetoin utilization protein [Rhodopseudomonas palustris
CGA009]
Length = 309
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S++ IA H ++ L + GI+ ++G T + TF+ +L G +A VD
Sbjct: 51 SLEHIALCHTDHHIVELRHM---SPSTGIVYVDGD--TSMSPGTFEAALRGVGGSVAAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V + + F RPPGHHA PMGFC FGN AIAARYAQR +G++R ++DF
Sbjct: 106 AVM----KGEAANAFVATRPPGHHAEITKPMGFCFFGNAAIAARYAQRQYGIERAAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PGTG E G D + +N PL G T
Sbjct: 162 DVHHGNGTQDIFWGDRTVMYCSTHQMPLFPGTGSQGERGEYD---NIVNAPLASEDGGTE 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F ++I+P +RF P+LI++SAG+DAH DPLASL + + + ++A
Sbjct: 219 FRFAFEQLILPQLKRFSPELIVISAGFDAHYRDPLASLNLRAEDFGWVTERLMEVAAQTA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L LS SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLQGLSESVAAHVGALMG 308
>gi|170052821|ref|XP_001862395.1| histone deacetylase [Culex quinquefasciatus]
gi|167873617|gb|EDS37000.1| histone deacetylase [Culex quinquefasciatus]
Length = 1108
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/287 (37%), Positives = 161/287 (56%), Gaps = 18/287 (6%)
Query: 15 LKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+K P A+ D++ VH+R +V+ + + ++R + + + Y TF+ + A
Sbjct: 556 MKRLKPRHATTDELCLVHSRQHVNVIRRTVEREEMKQVA--DKFNSVYFHPKTFECATLA 613
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G+ + +VD V ++R G ++RPPGHHA P GFC+F NVAIAA+YA R HG
Sbjct: 614 TGSVLQVVDEVLNGQSRS----GVCIVRPPGHHAESDMPHGFCIFNNVAIAAQYAIRDHG 669
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--GKIDEVGRGDGEGS 187
LKRV I+D+DVHHGNGT F +P + ++S H+ + +P + D VG G GEG
Sbjct: 670 LKRVLIVDWDVHHGNGTQHIFESNPKVLYMSVHRYDNATFFPKSKDANYDSVGNGTGEGF 729
Query: 188 TLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+N+P G GD F +VI+P A F P+L+LVSAG+DA + DPL + T Y
Sbjct: 730 NVNIPWNKKGMGDQEYAAAFQQVILPIAYEFDPELVLVSAGFDAAIGDPLGGCKVTPEAY 789
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ L R + LEGGYN+NS+SY++ ++ LG+P
Sbjct: 790 ----GHFTHWLSSLANGRVIVCLEGGYNVNSISYAMTLCTKSLLGDP 832
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 155/336 (46%), Gaps = 50/336 (14%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--- 57
+E E + E + AS +++ + H + L+ R SQ L E S
Sbjct: 134 LERCRELKLVERCAVIEPRMASEEEVLTKHTPEQLEILKST--RGSQDVAALEELSSHYD 191
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
+ +++ SL +AG+ I LVD++ + + G A+IRPPGHHA+ G+C F
Sbjct: 192 AVFIHPSSYDCSLLSAGSTIELVDAILEGRVQN----GMAIIRPPGHHAMKAEYNGYCFF 247
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTG 174
NVAIAA++A GLKR+ ++D+D+HHG GT FYDDP + + S H+ +P
Sbjct: 248 NNVAIAAQHALDKRGLKRILVVDWDIHHGQGTQRMFYDDPRVLYFSIHRYECGTFWPNLR 307
Query: 175 K--IDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
+ D +G G G G N+PL G + ++ ++++P A + + ++ + H
Sbjct: 308 ESDFDCIGEGAGLGYNFNVPLNRIGMTNGDYLAIWQQLLLPVALEGQ---MEITPAFYPH 364
Query: 232 VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+L PL S L + LEGGY L SL+ A + RA LG
Sbjct: 365 LLSPLMS---------------------LAQGKVAVVLEGGYCLTSLAEGGALTLRALLG 403
Query: 292 EPSKASEFDNPAILYEE---PSAKVKQAIERVKHIH 324
+P +L E+ P ++Q I H H
Sbjct: 404 DPC--------PLLVEKLQPPCESMQQTILNCVHSH 431
>gi|365886054|ref|ZP_09425026.1| putative deacetylase [Bradyrhizobium sp. STM 3809]
gi|365338482|emb|CCD97557.1| putative deacetylase [Bradyrhizobium sp. STM 3809]
Length = 309
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/262 (41%), Positives = 145/262 (55%), Gaps = 12/262 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H YV+ L + A GII ++G T + T++ + G +A DSV + K+R
Sbjct: 59 HNEHYVTELRQM---APTSGIIYLDGD--TSMSPGTWEAVMRGVGGAVAATDSVMSGKHR 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F +RPPGHHA PMGFC F NVAIAARYAQR G++R IIDFDVHHGNGT
Sbjct: 114 N----AFVAVRPPGHHAEIAKPMGFCFFDNVAIAARYAQRTFGIERAAIIDFDVHHGNGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+ D + + STHQ +PGTG E G D + +N PL G R+ F +
Sbjct: 170 QDIFWADKSVMYCSTHQMPLFPGTGARGERGEHD---TIVNAPLASEDGSLEFRSAFENL 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P +F P+L+++SAG+DAH DPLASL + + + +LA G R V L
Sbjct: 227 ILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLG 291
EGGY+L L SV+ A G
Sbjct: 287 EGGYDLQGLKESVSAHVAALTG 308
>gi|298294373|ref|YP_003696312.1| histone deacetylase [Starkeya novella DSM 506]
gi|296930884|gb|ADH91693.1| Histone deacetylase [Starkeya novella DSM 506]
Length = 309
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 158/290 (54%), Gaps = 14/290 (4%)
Query: 3 LTSEFRGSEIIEL-KNFSP-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
L F G + L + +P A +DI VH +V+ LE+AM +G++ I+G T
Sbjct: 30 LNRVFEGEQFATLAREQAPVAEREDIVRVHPEDFVAALEEAM---PSEGLVRIDGD--TV 84
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ T + G + VD V A + F +RPPGHHA + PMGFC+F NV
Sbjct: 85 MSPGTGEAIWRGVGGSVLAVDEVLAGRAAN----AFVSMRPPGHHAETRTPMGFCLFNNV 140
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQ+ HG+ RV I+DFDVHHGNGT + F+ DP + + STHQ +PGTG + E G
Sbjct: 141 AIAARHAQKVHGIGRVAIVDFDVHHGNGTQEIFWSDPSVMYASTHQMPLFPGTGSVGERG 200
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
D + +N PL G + I+P + F P+LI++SAG+DAH DPLA++
Sbjct: 201 TTD---NIVNAPLRSGDDGENFKAAVESRILPRLEAFGPELIIISAGFDAHARDPLANIN 257
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Y + + +A CG R V LEGGY+L L+ S + A +
Sbjct: 258 LLEDDYTWVTRKLMDVADKHCGGRIVSVLEGGYDLEGLARSASAHVMALM 307
>gi|448330775|ref|ZP_21520053.1| histone deacetylase [Natrinema versiforme JCM 10478]
gi|445610929|gb|ELY64693.1| histone deacetylase [Natrinema versiforme JCM 10478]
Length = 343
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 162/286 (56%), Gaps = 16/286 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P ++ +A+VH R Y+ + + +G G T +++ A
Sbjct: 38 VEYVEADPCDLETMAAVHEREYLESVRE----------FCADGGGSWDPDTTAVEKTWDA 87
Query: 73 A--GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
A AG+A + A + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 ACRSAGLACWAAEQALEGATGRNTPFSIGRPPGHHAVYDNAMGFCFVNNVAVAAQHALDS 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + +V IID+DVHHGNGT D FYD D+FF+S H+ G YPGTG +DE+G GDGEG+T
Sbjct: 148 DAYDVDQVAIIDWDVHHGNGTQDIFYDRDDVFFVSLHEQGLYPGTGDVDEIGEGDGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D+ I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNVPMPAGTDDSEYLAALEGPISAALTEFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
++ ++ LA D + F LEGGY L+ L+ SVA F G EP
Sbjct: 268 MSDRVRTLADD-TDAALAFVLEGGYGLDVLADSVALVHETFDGREP 312
>gi|359793587|ref|ZP_09296332.1| histone deacetylase superfamily protein [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359250192|gb|EHK53718.1| histone deacetylase superfamily protein [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 308
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 146/260 (56%), Gaps = 17/260 (6%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV-- 83
I H +YV + +A+ +QGI ++G T + ++Q L A GA A VD V
Sbjct: 55 ILYAHPESYVERIRRAI---PEQGIASLDGD--TSVSPKSWQAVLTAIGAANAAVDDVFA 109
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
A+ N F RPPGHHA MGFCVF + AIAAR+AQ+ HG RV I+D+DV
Sbjct: 110 GAADNV------FVASRPPGHHAEKTTAMGFCVFNHAAIAARHAQKKHGAGRVAIVDWDV 163
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT D F++DP + + STHQ YPGTG E G G+ +N PL SG A R
Sbjct: 164 HHGNGTQDIFWNDPSVLYCSTHQMPLYPGTGTESET----GAGNIVNAPLAPQSGSEAFR 219
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
F ++P F PDLI++SAG+DAH DPLA + T + + A CG+
Sbjct: 220 EAFRSRVLPAVDAFAPDLIIISAGFDAHHRDPLAEINLTEEDFDWATGKLMDRAARHCGN 279
Query: 264 RCVFFLEGGYNLNSLSYSVA 283
R V LEGGY+L LS+SVA
Sbjct: 280 RLVSVLEGGYDLQGLSFSVA 299
>gi|336253185|ref|YP_004596292.1| histone deacetylase superfamily [Halopiger xanaduensis SH-6]
gi|335337174|gb|AEH36413.1| histone deacetylase superfamily [Halopiger xanaduensis SH-6]
Length = 342
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 173/321 (53%), Gaps = 29/321 (9%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E + P +D IA+VH R YV +E+ +G G T A A T+
Sbjct: 38 VEYVDADPVDIDTIAAVHDREYVESVEQ----------FCADGGGDWDPDTSAVAETWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
++G A A+ ++ + R P F++ RPPGHHA+ MGFC N A+AA++A
Sbjct: 88 IRHSSGLACWAVEAALEGATGRKTP---FSIGRPPGHHAVVDDAMGFCFVNNAAVAAQHA 144
Query: 128 --QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+ + RV ++D+DVHHGNGT D FY+ D+FF+S H+ G YPGTG IDE+G GDG
Sbjct: 145 LDHDEYDIDRVAVVDWDVHHGNGTQDIFYEREDVFFVSIHEKGLYPGTGAIDEIGEGDGH 204
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+N+P+P G+GD A I + DL+LVSAG+DAH DP++ ++ +T
Sbjct: 205 GTTMNIPMPAGTGDEAYLAAAEGPIATALEAHDIDLLLVSAGFDAHRHDPISRIRLSTEA 264
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL 305
Y +L ++ +A D C + F LEGGY L+ L+ SVA F G A +
Sbjct: 265 YALLTDRLRTIA-DNCDAALAFVLEGGYGLDVLADSVAMVHETFDGREPIAPDG------ 317
Query: 306 YEEPSAKVKQAIERVKHIHSL 326
E S + +E+V H L
Sbjct: 318 --ECSDDAVETLEQVVDAHGL 336
>gi|294497858|ref|YP_003561558.1| histone deacetylase family protein [Bacillus megaterium QM B1551]
gi|294347795|gb|ADE68124.1| histone deacetylase family protein [Bacillus megaterium QM B1551]
Length = 373
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 103/260 (39%), Positives = 158/260 (60%), Gaps = 12/260 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP-TYATATTFQESLAAAGAGIAL 79
AS +D+ VH + ++ ++KA + +++ GP YA+A T + +AGA +
Sbjct: 67 ASDEDLLRVHTKNHIGHVQKACEAETRE-------VGPEAYASAETEGIARLSAGAVMKA 119
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD+V S+ +A IRPPGHHA MGFC + NVA+ A YA +GLKRV I+
Sbjct: 120 VDTVMESETISKV---YAQIRPPGHHASSDQAMGFCFYNNVAVGAAYAIEHYGLKRVAIL 176
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT D FY+ D+ +S H++ +P +G++ E+G+G GEG +N+P+P +G
Sbjct: 177 DWDVHHGNGTQDIFYERDDVLVISIHEEDYFPLESGQVYEIGQGKGEGYNVNIPVPSLTG 236
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D + VF +I P +F+P+LI++SAG DA+ LDP++ L T + +A +++LA+
Sbjct: 237 DEGYQYVFESIIAPVISQFEPELIIISAGQDANALDPISRLMVTREGFKYMANKVRELAE 296
Query: 259 DLCGSRCVFFLEGGYNLNSL 278
C R + EGGYNL L
Sbjct: 297 TYCEGRLIVAQEGGYNLAYL 316
>gi|144900833|emb|CAM77697.1| histone deacetylase superfamily [Magnetospirillum gryphiswaldense
MSR-1]
Length = 310
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 138/223 (61%), Gaps = 7/223 (3%)
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L +AGAG A VD+VA + R F +RPPGHHA MGFC+F N A+AA +A+
Sbjct: 94 ALRSAGAGCAAVDAVATKQARN----AFCAVRPPGHHAERDAAMGFCLFNNAAVAALHAR 149
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
AHG KRV I+DFDVHHGNGT +D+P +F+ STHQ+ +YP TG +E G G G
Sbjct: 150 DAHGFKRVAIVDFDVHHGNGTQHILWDEPGMFYASTHQEHAYPNTGLAEETG---GVGRM 206
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PLP G R F +++V + F PD +++SAG+DAH DPLA L+ T +
Sbjct: 207 VNVPLPAGCASDDFRQAFADMLVYKLREFAPDFLIISAGFDAHAADPLAHLRLKTSDFKW 266
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ ++A + +R V LEGGY++ +L+ SV + RA +G
Sbjct: 267 ATEQLLEVAAETADNRVVSVLEGGYDIEALAASVKEHVRALMG 309
>gi|407975810|ref|ZP_11156713.1| histone deacetylase superfamily protein [Nitratireductor indicus
C115]
gi|407428671|gb|EKF41352.1| histone deacetylase superfamily protein [Nitratireductor indicus
C115]
Length = 308
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 143/246 (58%), Gaps = 10/246 (4%)
Query: 38 LEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFA 97
L+K ++G+ I+ T + +F+ +L A G A VD V + + F
Sbjct: 64 LDKVKMSIPEKGMARIDED--TTVSPKSFEAALLAIGGANAAVDDVFSGEAGN----VFV 117
Query: 98 LIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDP 157
RPPGHHA MGFC+F N AIAAR+AQR HG +RV I+D+DVHHGNGT D F+DDP
Sbjct: 118 AGRPPGHHAEKDRAMGFCLFNNAAIAARHAQRKHGAERVAIVDWDVHHGNGTQDIFWDDP 177
Query: 158 DIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRF 217
+ + STHQ YPGTG DE G G+ +N PLP G+G A R + +++P RF
Sbjct: 178 TVLYCSTHQMPLYPGTGARDETGVGN----IVNAPLPPGAGSEAFREALNALVLPALDRF 233
Query: 218 KPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNS 277
PDLI++SAG+DAH DPLA L F T + + + A L R V LEGGY+L
Sbjct: 234 SPDLIIISAGFDAHWRDPLAELNFQTEDFDWATGVLMEKADRLSQGRLVSLLEGGYDLEG 293
Query: 278 LSYSVA 283
LS SVA
Sbjct: 294 LSASVA 299
>gi|195432308|ref|XP_002064165.1| GK20022 [Drosophila willistoni]
gi|194160250|gb|EDW75151.1| GK20022 [Drosophila willistoni]
Length = 1136
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 171/316 (54%), Gaps = 22/316 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D++ H R++V+ + + + R+ ++ L G Y TF + AAG+ + V
Sbjct: 599 ATTDEVCLAHTRSHVNSIRRLLGRSPEELQELGAGFNSVYLHPRTFDCATLAAGSVLQAV 658
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + R G +RPPGHHA P P GFC+F NVAIAA+YA R GL+RV I+D
Sbjct: 659 DCVLRGETRS----GICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIRDFGLQRVLIVD 714
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +P + ++S H + GS +P G D VG+ G G +N+P
Sbjct: 715 WDVHHGNGTQHIFEANPKVLYISVHRYEHGSFFPKGPDGNYDVVGKQAGRGFNVNIPWNK 774
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A F P L+LVSAG+DA + DPL + T Y + +
Sbjct: 775 KGMGDMEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLS 834
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN--------PAILY 306
LA G + + LEGGYN+NS+SY++ ++ LG+P +F+N P + +
Sbjct: 835 ALA----GGKIIVCLEGGYNVNSISYAMTMCTKSLLGDPMPTPQFNNGSGDARKPPTVAF 890
Query: 307 EEPSAKVKQAIERVKH 322
+ ++ +E +H
Sbjct: 891 QSCLETLQSCLEVQRH 906
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/241 (41%), Positives = 138/241 (57%), Gaps = 14/241 (5%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +TF+ SL A+G+ I LVD + K + G A+IRPPGHHA+ G+C F N
Sbjct: 205 YIHPSTFELSLLASGSTIELVDQLIMGKAQN----GMAIIRPPGHHAMKAEFNGYCFFNN 260
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKI 176
VA+AA++A H L+R+ IID+DVHHG GT FYDDP + + S H + GS +P +
Sbjct: 261 VALAAKHALDKHKLQRILIIDYDVHHGQGTQRFFYDDPRVLYFSIHRFEYGSFWPNLHES 320
Query: 177 D--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
D +G G G+G N+PL G + +F ++++P A F+P+LILVSAGYDA +
Sbjct: 321 DFHAIGTGAGQGYNFNVPLNATGMTNGDYLAIFQQLLMPVALEFQPELILVSAGYDAALG 380
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
P ++ T Y L + +LA R LEGGY L SL+ A S R+ LG+P
Sbjct: 381 CPEGEMEVTPACYPHLLNPLLRLA----SCRVAVVLEGGYCLESLAEGAALSLRSLLGDP 436
Query: 294 S 294
Sbjct: 437 C 437
>gi|183220191|ref|YP_001838187.1| putative deacetylase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189910311|ref|YP_001961866.1| histone deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167774987|gb|ABZ93288.1| Histone deacetylase [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778613|gb|ABZ96911.1| Putative deacetylase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 311
Score = 200 bits (508), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 161/282 (57%), Gaps = 11/282 (3%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+E S+ K F A + I+ +H YV + K + ++G ++G T
Sbjct: 31 LEKISDLPSESFTWEKTFKEAPLSLISEIHDPNYVRLVAKVCE---EKGSGYLDGD--TV 85
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ TFQ + A GAG+ L + K + G AL+RPPGHHA MGFC+F N+
Sbjct: 86 YSPNTFQAASLAVGAGVTLAQDILDGKLKN----GMALVRPPGHHAESDHAMGFCLFNNI 141
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AI A+Y Q + G+KR+ I+D+DVHHGNGT FY+D ++F+S HQ YPGTG E G
Sbjct: 142 AITAKYLQ-SQGIKRILILDWDVHHGNGTQHQFYEDDSVYFVSLHQYPFYPGTGSEKESG 200
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
+G G G+TLNLP+ G+ + F +I + F+P+ +LVSAG+DAH DPLA +
Sbjct: 201 QGKGFGTTLNLPMARGAEEKQYLDQF-PLIHKEMETFQPEFVLVSAGFDAHRNDPLAGMN 259
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ +Y + +KQ+A+ G + + FLEGGY+ +LS SV
Sbjct: 260 LNSSSYEKMTNEVKQIARVHSGGKLLSFLEGGYDFQALSESV 301
>gi|192289451|ref|YP_001990056.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
TIE-1]
gi|192283200|gb|ACE99580.1| histone deacetylase superfamily [Rhodopseudomonas palustris TIE-1]
Length = 309
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S++ IA H ++ L + G++ ++G T + TF+ +L G +A VD
Sbjct: 51 SLEHIALCHTDHHIVELRHM---SPSTGVVYVDGD--TSMSPGTFEAALRGVGGSVAAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V + + F RPPGHHA PMGFC FGN AIAARYAQR +G++R ++DF
Sbjct: 106 AVM----KGEAANAFVATRPPGHHAEITKPMGFCFFGNAAIAARYAQRQYGIERAAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PGTG E G D + +N PL G T
Sbjct: 162 DVHHGNGTQDIFWGDRTVMYCSTHQMPLFPGTGSQGERGEYD---NIVNAPLASEDGGTE 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F ++I+P +RF P+LI++SAG+DAH DPLASL + + + ++A
Sbjct: 219 FRFAFEQLILPQLKRFSPELIVISAGFDAHYRDPLASLNLRAEDFGWVTERLMEVAAQTA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L LS SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLQGLSESVAAHVGALMG 308
>gi|222478548|ref|YP_002564785.1| histone deacetylase superfamily [Halorubrum lacusprofundi ATCC
49239]
gi|222451450|gb|ACM55715.1| histone deacetylase superfamily [Halorubrum lacusprofundi ATCC
49239]
Length = 334
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 167/318 (52%), Gaps = 25/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA+ +++ +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYAEADPATREEVVAVHDAEYVDELEA----------FVADGGGSWDPDTVASEGTWDA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+LA+AG S + D P FAL RPPGHHA+P MGFC F N A+AA+
Sbjct: 88 ALASAGLAQWAARSALNGADGRDTP--FALGRPPGHHAVPDDAMGFCFFNNAAVAAQTVL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
RV + D+DVHHGNGT D FYD D+ + S H+DG YP TG +DE G +G G+T
Sbjct: 146 DDGAADRVAVFDWDVHHGNGTQDVFYDRGDVLYASIHEDGLYPDTGALDETGHDEGAGTT 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+NLPL G+GD EV+ P +RF PDL++VSAG+DAH DP++ ++ ++ Y +
Sbjct: 206 VNLPLSAGAGDADYLYAIDEVVAPAIKRFDPDLVIVSAGFDAHRHDPISRMRVSSEGYAL 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
+ I+ + ++ + + LEGGY L++L+ V+ F G P ++
Sbjct: 266 MTDRIRTVTDNIEAANS-YVLEGGYGLDTLAEGVSMVHETFDGR--------TPVGDDDD 316
Query: 309 PSAKVKQAIERVKHIHSL 326
P K + + ++ + L
Sbjct: 317 PDEKTESLVTELRELLDL 334
>gi|452206225|ref|YP_007486347.1| HdaI-type histone deacetylase [Natronomonas moolapensis 8.8.11]
gi|452082325|emb|CCQ35579.1| HdaI-type histone deacetylase [Natronomonas moolapensis 8.8.11]
Length = 336
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 119/317 (37%), Positives = 167/317 (52%), Gaps = 21/317 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A D I +VH YV+ +E D T A T++ +LA+
Sbjct: 38 VEYREGFLADRDAIEAVHDDEYVADVEAFCDDGGGTW------DADTVAVEETWEAALAS 91
Query: 73 AGAGIALVD-SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--QR 129
AG VD ++ + R P F++ RPPGHHA MGFC F N A+AA+ A +
Sbjct: 92 AGLACWAVDEALDGADGRATP---FSIGRPPGHHAEFDEAMGFCFFNNAAVAAQRAIDRD 148
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
G+ R I D+DVHHGNGT + FYD D+F+ S H+ G +PGTG +DE G D E + L
Sbjct: 149 GTGVDRAIIFDWDVHHGNGTQNIFYDQDDVFYASAHEQGLFPGTGDVDETGGPDAEQTIL 208
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N PLPGGSGD +++ P +RF PDL +VSAG+DAH DP++ ++ +T Y +
Sbjct: 209 NAPLPGGSGDEEYAAFLDDLLAPAMERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYGYM 268
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
++ +A D + F LEGGY L++LS SV F G P + +
Sbjct: 269 TDRVRSIA-DAHDAALAFVLEGGYGLDALSESVGMVHEVFDGR--------EPVVPEGDV 319
Query: 310 SAKVKQAIERVKHIHSL 326
SAK + IE V+ H L
Sbjct: 320 SAKAEGVIEDVRDAHDL 336
>gi|399984595|ref|YP_006564943.1| Histone deacetylase superfamily [Mycobacterium smegmatis str. MC2
155]
gi|399229155|gb|AFP36648.1| Histone deacetylase superfamily [Mycobacterium smegmatis str. MC2
155]
Length = 324
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 146/265 (55%), Gaps = 16/265 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D VH+ AYV LE A G + ++G G T +T++ L G + V
Sbjct: 65 AELDVTRYVHSNAYVDALEAAR---PTDGFVYLDG-GDTMMEPSTWEVVLRGVGGTLQAV 120
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
DSV ++N F RPPGHHA + MGFC+F N++I AR+AQ HGL RV I
Sbjct: 121 DSVLDGTAQN------AFVACRPPGHHAETERAMGFCLFNNISIGARHAQLKHGLSRVAI 174
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+DFDVHHGNGT + FY D + + STHQ +PGTG DE G G+ N PL G G
Sbjct: 175 VDFDVHHGNGTQEIFYSDGSVVYASTHQMPLFPGTGATDETGVGN----IFNAPLRAGDG 230
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+R F + I+P RF+P+LI+VSAG+DAH DPL SL T + + A+
Sbjct: 231 GDELREAFRDRIIPAVDRFEPELIIVSAGFDAHERDPLGSLSMTADDFGWATRELMAAAE 290
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVA 283
C R V LEGGY+L L SV+
Sbjct: 291 RHCEGRLVSVLEGGYDLQGLRESVS 315
>gi|94263759|ref|ZP_01287566.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
gi|93455859|gb|EAT06022.1| Histone deacetylase superfamily [delta proteobacterium MLMS-1]
Length = 349
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 123/187 (65%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHHA GFC+F N+AIAA YA++ G KR+ I D+D+HHGNGT AF D
Sbjct: 117 FALVRPPGHHAEHAHSSGFCLFNNIAIAAHYARQKLGFKRILIFDWDLHHGNGTQHAFDD 176
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
+ F STHQ +PG+G + EVGRG GEG T+N+PLPGG D A + +E++VP A+
Sbjct: 177 SDQVLFFSTHQFPCFPGSGTLSEVGRGKGEGYTINVPLPGGQDDAAFARICNELLVPLAR 236
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
++P+LI+VSAG+D + DPL S+ + Y + + +LA LC R V LEGGYNL
Sbjct: 237 AYQPELIMVSAGFDTYAGDPLGSMMVSELGYAYMTRVLTELASQLCQQRLVLVLEGGYNL 296
Query: 276 NSLSYSV 282
+ V
Sbjct: 297 GIMERGV 303
>gi|402298501|ref|ZP_10818189.1| histone deacetylase superfamily protein [Bacillus alcalophilus ATCC
27647]
gi|401726319|gb|EJS99556.1| histone deacetylase superfamily protein [Bacillus alcalophilus ATCC
27647]
Length = 369
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/323 (35%), Positives = 172/323 (53%), Gaps = 40/323 (12%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
PA+ +++A H + + ++ D + G + I G G +++ +L +AG +
Sbjct: 64 PATEEEVALFHTKELIQKTKEVSDNGGGETGPLAIVGPG-------SYEIALLSAGGALT 116
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD+V D +AL RPPGHHA GFC+F NVAIA +YA+ +GLKRV +
Sbjct: 117 GVDAVMNG----DVKNVYALTRPPGHHAEAHEGSGFCLFNNVAIAGKYAKAKYGLKRVLV 172
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGS 197
+D+DVHHGNGT AFY+D ++ F+S HQD YP G + VG+ EG T+N+PLP G+
Sbjct: 173 LDWDVHHGNGTESAFYEDNEVLFISLHQDRYYPADRGFAEHVGKNGAEGYTVNIPLPAGT 232
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G+ F E++ P FKP+LI+VSAG D + DPLA + T +Y A + +LA
Sbjct: 233 GNAGYMYAFKEIVAPIVNEFKPELIIVSAGQDPSLFDPLARMMVTRDGFYQFAETMNELA 292
Query: 258 KDLCGSRCVFFLEGGY--------------NLNSLSYSVADSFR-AFLGEPSKASEFDNP 302
K+ C + V EGGY +++ +S ++ D F AF G P+
Sbjct: 293 KNHCDGKLVLCHEGGYSGAYVPFCSLAIVESISGISTNIEDPFAPAFPGLPTN------- 345
Query: 303 AILYEEPSAKVKQAIERVKHIHS 325
E K+A++ VK I S
Sbjct: 346 -----ELLTSQKEAVDHVKQIQS 363
>gi|328953739|ref|YP_004371073.1| histone deacetylase superfamily protein [Desulfobacca acetoxidans
DSM 11109]
gi|328454063|gb|AEB09892.1| histone deacetylase superfamily [Desulfobacca acetoxidans DSM
11109]
Length = 320
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 151/284 (53%), Gaps = 13/284 (4%)
Query: 12 IIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
I EL P A +D I +H Y+ A ++ + I S A ++ +
Sbjct: 42 IDELVLIQPYEAPLDRITRLHDPDYLERFRLACEKKMR-----IFQSPDNGICADSYAIA 96
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
L A G +A D+V K F +RPPGHHA MGFC F N+AI ARY Q
Sbjct: 97 LLAVGGVLAACDAVMTGKAHN----AFCAVRPPGHHAEHAQAMGFCFFNNIAIGARYLQD 152
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGS 187
+GL+R+ I+D+DVHHGNGT F DP +F++S HQD YPGTG+ +E G+G G G
Sbjct: 153 KYGLERIAILDWDVHHGNGTQHLFETDPTVFYISLHQDPFTCYPGTGRQNEQGKGAGLGF 212
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
TLN PLP GSGD E ++P F PD +++S+G+DAH DPLA ++ + Y
Sbjct: 213 TLNFPLPRGSGDKTYLKTIQEGVIPALVAFHPDFLMISSGFDAHADDPLAHMELSRDGYA 272
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ + A++ C SR + LEGGYNL L V D R G
Sbjct: 273 HMGRLMAAFAQEHCNSRIITVLEGGYNLEVLQECVEDHLRILQG 316
>gi|146339203|ref|YP_001204251.1| deacetylase [Bradyrhizobium sp. ORS 278]
gi|146192009|emb|CAL76014.1| putative deacetylase [Bradyrhizobium sp. ORS 278]
Length = 309
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 145/262 (55%), Gaps = 12/262 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H YV+ L + A GII ++G T + T++ + G +A +SV + K+R
Sbjct: 59 HNEHYVTELRQM---APTSGIIYLDGD--TSMSPGTWEAVMRGVGGAVAATESVMSGKHR 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F +RPPGHHA PMGFC F NVAIAARYAQR G++R IIDFDVHHGNGT
Sbjct: 114 N----AFVAVRPPGHHAEIAKPMGFCFFDNVAIAARYAQRTFGIERAAIIDFDVHHGNGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+ D + + STHQ +PGTG E G D + +N PL G R+ F +
Sbjct: 170 QDIFWADKSVMYCSTHQMPLFPGTGARSERGEHD---TIVNAPLASEDGSLEFRSAFENL 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P +F P+L+++SAG+DAH DPLASL + + + +LA G R V L
Sbjct: 227 ILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLG 291
EGGY+L L SV+ A G
Sbjct: 287 EGGYDLQGLKESVSAHVAALTG 308
>gi|154251234|ref|YP_001412058.1| histone deacetylase superfamily protein [Parvibaculum
lavamentivorans DS-1]
gi|154155184|gb|ABS62401.1| histone deacetylase superfamily [Parvibaculum lavamentivorans DS-1]
Length = 309
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 159/270 (58%), Gaps = 13/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS + IA VH +++ +E + + G I+ T + + + + AAGA + V
Sbjct: 50 ASHEQIARVHPMSHIERIESCV---PESGFRRIDAD--TAMSPGSAEAAFRAAGAVVYAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + R GF IRPPGHHA P+ MGFC+F N+AI A +A+ AHG KRV +ID
Sbjct: 105 DEVMSGRARN----GFCAIRPPGHHAEPETSMGFCLFNNIAIGALHAREAHGCKRVAVID 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT AF +PD+F+ STHQ YPGTG+ E G G+ LN L G+G
Sbjct: 161 FDVHHGNGTQAAFETNPDLFYASTHQWPLYPGTGRAGEFGLGN----ILNRCLQPGAGSA 216
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R + ++P ++F+PD I +SAG+DAH+ DPLA+L+ T Y + A + + A L
Sbjct: 217 EFRAAISDAVIPALEQFRPDFIFISAGFDAHISDPLANLRLTDEDYGWVTAELVKTADRL 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
CG R V LEGGY+L +L+ S +A +
Sbjct: 277 CGGRVVSALEGGYDLEALASSSRAHVKALM 306
>gi|383773558|ref|YP_005452624.1| putative deacetylase [Bradyrhizobium sp. S23321]
gi|381361682|dbj|BAL78512.1| putative deacetylase [Bradyrhizobium sp. S23321]
Length = 309
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 149/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A G+I I+G T + T++ + G +A ++
Sbjct: 52 LDLVTLCHNEHYVTELRHM---APTSGLIYIDGD--TSMSPGTWEAVMRGVGGAVAATEA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V ++R F +RPPGHHA PMGFC F NVAIAAR+AQR +G+ R I+DFD
Sbjct: 107 VMNGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNVAIAARHAQRKYGITRAAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL G
Sbjct: 163 VHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKGE--RGDHD-TIVNAPLASEDGGPEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R+ F +I+P +F P+LI++SAG+DAH DPLASL Y + + LA G
Sbjct: 220 RSAFENLILPQLTKFSPELIIISAGFDAHYRDPLASLNLRAEDYTWVTRKLMDLADKTAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
SR V LEGGY+L L SV A +G
Sbjct: 280 SRIVSVLEGGYDLQGLKESVTAHVGALMG 308
>gi|118472445|ref|YP_884587.1| histone deacetylase superfamily protein [Mycobacterium smegmatis
str. MC2 155]
gi|441201829|ref|ZP_20970978.1| putative deacetylase [Mycobacterium smegmatis MKD8]
gi|118173732|gb|ABK74628.1| histone deacetylase superfamily protein [Mycobacterium smegmatis
str. MC2 155]
gi|440630519|gb|ELQ92290.1| putative deacetylase [Mycobacterium smegmatis MKD8]
Length = 309
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 112/265 (42%), Positives = 146/265 (55%), Gaps = 16/265 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D VH+ AYV LE A G + ++G G T +T++ L G + V
Sbjct: 50 AELDVTRYVHSNAYVDALEAAR---PTDGFVYLDG-GDTMMEPSTWEVVLRGVGGTLQAV 105
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
DSV ++N F RPPGHHA + MGFC+F N++I AR+AQ HGL RV I
Sbjct: 106 DSVLDGTAQN------AFVACRPPGHHAETERAMGFCLFNNISIGARHAQLKHGLSRVAI 159
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+DFDVHHGNGT + FY D + + STHQ +PGTG DE G G+ N PL G G
Sbjct: 160 VDFDVHHGNGTQEIFYSDGSVVYASTHQMPLFPGTGATDETGVGN----IFNAPLRAGDG 215
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+R F + I+P RF+P+LI+VSAG+DAH DPL SL T + + A+
Sbjct: 216 GDELREAFRDRIIPAVDRFEPELIIVSAGFDAHERDPLGSLSMTADDFGWATRELMAAAE 275
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVA 283
C R V LEGGY+L L SV+
Sbjct: 276 RHCEGRLVSVLEGGYDLQGLRESVS 300
>gi|261218441|ref|ZP_05932722.1| histone deacetylase [Brucella ceti M13/05/1]
gi|261320709|ref|ZP_05959906.1| histone deacetylase [Brucella ceti M644/93/1]
gi|260923530|gb|EEX90098.1| histone deacetylase [Brucella ceti M13/05/1]
gi|261293399|gb|EEX96895.1| histone deacetylase [Brucella ceti M644/93/1]
Length = 339
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 152/290 (52%), Gaps = 19/290 (6%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV------HARAYVSGL-EKAMDRASQQGIILIEG 55
L SE G + L + A + H A S + E D + Q I+ ++G
Sbjct: 51 LMSELEGPDFYRLDRVEAPHAGEAAILLAHPEEHLEAVRSKIPEPVEDGEASQPIVKLDG 110
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
Y + + +L A GA +A VD V A+ N F RPPGHHA MG
Sbjct: 111 DTYVYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------FVASRPPGHHAERSRAMG 164
Query: 114 FCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT 173
FCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DDP + F STHQ YPG+
Sbjct: 165 FCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDDPGVMFCSTHQFPLYPGS 224
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G E G G+ +N PL +G R F+ I+P F+PDLIL+SAG+DAH
Sbjct: 225 GDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDNFRPDLILISAGFDAHFR 280
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA + + + + A+ C R V LEGGY+L LS S +
Sbjct: 281 DPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSAS 330
>gi|149202887|ref|ZP_01879858.1| histone deacetylase family protein [Roseovarius sp. TM1035]
gi|149143433|gb|EDM31469.1| histone deacetylase family protein [Roseovarius sp. TM1035]
Length = 309
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/277 (42%), Positives = 157/277 (56%), Gaps = 13/277 (4%)
Query: 7 FRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTF 66
G ++I +K A DD+ VH +++V + RA+ ++ T+ + T
Sbjct: 34 LEGKDVILVKAPLVAE-DDLLRVHPKSHVEAI-----RAASPASGKVQLDADTWMSPGTL 87
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+ AAG + VD V + + F RPPGHHA + MGFC+FGNVA+AA+Y
Sbjct: 88 AAAHRAAGGAVRAVDLVLSGEADN----VFVATRPPGHHAERETTMGFCLFGNVAVAAKY 143
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
A HGLKRV ++DFDVHHGNGT D D+P FF S+HQ +PGTG E G D
Sbjct: 144 ALDHHGLKRVAVVDFDVHHGNGTQDLLEDEPRAFFASSHQYPLWPGTGAAHETGPHD--- 200
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+ LN+PLP SG R + E + P + FKPDLILVSAG+DAH DPLA L T +
Sbjct: 201 TILNVPLPPRSGGAVFRREYEEKVFPRVRAFKPDLILVSAGFDAHRDDPLADLMLETEDF 260
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ + LA +LCG + V LEGGYNL +L+ SVA
Sbjct: 261 AWVTERLCDLADELCGGKLVSCLEGGYNLYALAESVA 297
>gi|421600019|ref|ZP_16043110.1| hypothetical protein BCCGELA001_19480 [Bradyrhizobium sp.
CCGE-LA001]
gi|404267872|gb|EJZ32461.1| hypothetical protein BCCGELA001_19480 [Bradyrhizobium sp.
CCGE-LA001]
Length = 309
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A G + I+G T + T++ + G +A ++
Sbjct: 52 LDLVTLCHNEHYVTELRHI---APTSGQVYIDGD--TSMSPGTWEAVMRGVGGAVAATEA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V A ++R F +RPPGHHA PMGFC F NVAIAAR+AQR +G+KR I+DFD
Sbjct: 107 VMAGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNVAIAARHAQRKYGIKRAAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL G
Sbjct: 163 VHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKSE--RGDHD-TIVNAPLASEDGGPEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R+ F +I+P ++F P+L+++SAG+DAH DPLASL Y + + LA G
Sbjct: 220 RSAFENLILPQLEKFSPELLIISAGFDAHYRDPLASLNLRAEDYAWVTRKLMDLADKSAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SV A +G
Sbjct: 280 GRVVSVLEGGYDLQGLKESVTAHVGALMG 308
>gi|261221646|ref|ZP_05935927.1| histone deacetylase superfamily protein [Brucella ceti B1/94]
gi|261317106|ref|ZP_05956303.1| histone deacetylase superfamily protein [Brucella pinnipedialis
B2/94]
gi|261757662|ref|ZP_06001371.1| histone deacetylase family [Brucella sp. F5/99]
gi|265997608|ref|ZP_06110165.1| histone deacetylase superfamily protein [Brucella ceti M490/95/1]
gi|260920230|gb|EEX86883.1| histone deacetylase superfamily protein [Brucella ceti B1/94]
gi|261296329|gb|EEX99825.1| histone deacetylase superfamily protein [Brucella pinnipedialis
B2/94]
gi|261737646|gb|EEY25642.1| histone deacetylase family [Brucella sp. F5/99]
gi|262552076|gb|EEZ08066.1| histone deacetylase superfamily protein [Brucella ceti M490/95/1]
Length = 316
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGNKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|284163711|ref|YP_003401990.1| histone deacetylase [Haloterrigena turkmenica DSM 5511]
gi|284013366|gb|ADB59317.1| Histone deacetylase [Haloterrigena turkmenica DSM 5511]
Length = 340
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 168/318 (52%), Gaps = 25/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G + +E+ A
Sbjct: 38 VEYVEADPCDLDRLAAVHEREYLESVRE----------FCADGGGNWDPDTSAVEETWDA 87
Query: 73 A--GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AG+A AA + F++ RPPGHHA+ MGFC NVA+AA+YA A
Sbjct: 88 VCQSAGLACWAVEAALEGATGRRTPFSIGRPPGHHAVYDDAMGFCFVNNVAVAAQYALDA 147
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
+ + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG +DE G G GEG+T+N
Sbjct: 148 YDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEQGLYPGTGAVDETGEGAGEGTTMN 207
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+P+P G+ D I + PDL+L+SAG+DAH DP++ ++ +T Y ++
Sbjct: 208 IPMPAGTDDREYLAAVEGPISHALTDYDPDLLLISAGFDAHRHDPISRIRLSTEAYALMT 267
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EPSKA-SEFDNPAILYEE 308
+ LA D + F LEGGY L+ L+ SVA F G EP + SEF
Sbjct: 268 DRFRTLA-DETDAAFAFILEGGYGLDVLADSVAIVHETFDGREPIEPDSEF--------- 317
Query: 309 PSAKVKQAIERVKHIHSL 326
K + A++ V H L
Sbjct: 318 -GEKAESALDEVLEAHGL 334
>gi|348670682|gb|EGZ10503.1| hypothetical protein PHYSODRAFT_261835 [Phytophthora sojae]
Length = 365
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 156/267 (58%), Gaps = 12/267 (4%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E +E+ A+ + VH R Y+ LE+A R ++G G+ A + F +
Sbjct: 51 EQLEIVKPQVATNAQLERVHTRRYLEELERASAR--EEG-----GNAGEEAPFSQFAFDV 103
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
A AG + + A R D +AL RPPGHHA+ MGFC+ NVAI A++ A
Sbjct: 104 ARLSAGGVIAAADAVMDGRVD--RAYALTRPPGHHAVKDRGMGFCLLNNVAITAKHLLDA 161
Query: 131 H--GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGS 187
+ ++R+ I+D+DVHHGNGT +AFY+D ++ F+S HQD +YP +G I E G G GEG
Sbjct: 162 YPTQIRRIAIVDYDVHHGNGTQEAFYEDDNVLFVSLHQDNNYPADSGAITERGDGKGEGF 221
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N+PLP GSG A F V+VP +FKPD +LVS+G+DA DPLA++ ++ +
Sbjct: 222 NINVPLPPGSGSGAYEYAFKNVVVPALDKFKPDFVLVSSGFDASYADPLAAMILSSNVFR 281
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYN 274
+A + + AK LCG R VF EGGY+
Sbjct: 282 FMARELVEAAKRLCGGRIVFAHEGGYS 308
>gi|11497747|ref|NP_068969.1| acetylpolyamine aminohydrolase [Archaeoglobus fulgidus DSM 4304]
gi|3024859|sp|O30107.1|Y130_ARCFU RecName: Full=Uncharacterized protein AF_0130
gi|2650515|gb|AAB91099.1| acetylpolyamine aminohydrolase (aphA) [Archaeoglobus fulgidus DSM
4304]
Length = 359
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 171/326 (52%), Gaps = 20/326 (6%)
Query: 7 FRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTF 66
F I+ L+ F AS++D+ VH YV LE + + GII + + P F
Sbjct: 40 FESERIVLLEPFK-ASLEDVLEVHTEEYVRFLEM---ESKKGGIIDFDTNIPV----GVF 91
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+L AAG I +V + FA+IRPPGHHA P GFC N+AI ++
Sbjct: 92 DRALLAAGGAIRAAQAVLNKECEN----AFAMIRPPGHHAKPYIGAGFCYLNNMAIMVKW 147
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
+ G +R+ I+D+D HHG+GT + FY+D + F+STHQ YPGTG +E G G GEG
Sbjct: 148 LLK-QGFERIAILDWDAHHGDGTQEIFYNDDRVLFISTHQMPLYPGTGYPEECGTGKGEG 206
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
T+N+PLP G+GD V E+I P FKP I +SAG D H DP+ SL T Y
Sbjct: 207 YTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPITSLALTARGY 266
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLN-SLSYSVADSFRAFLG-EPSKASEFDN--P 302
+ +A+ C R V LEGGY++ +L Y+ A G + S E +N P
Sbjct: 267 AEMMRRAVAMAEKHCDGRLVAVLEGGYSVEGALPYTNLGIIAAMAGFDLSAIREPENYLP 326
Query: 303 AILYEEPSA---KVKQAIERVKHIHS 325
+L+ + + K+K IE VK +HS
Sbjct: 327 ELLWRKRDSALVKLKHNIEDVKRVHS 352
>gi|367474103|ref|ZP_09473629.1| putative deacetylase [Bradyrhizobium sp. ORS 285]
gi|365273601|emb|CCD86097.1| putative deacetylase [Bradyrhizobium sp. ORS 285]
Length = 309
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 145/262 (55%), Gaps = 12/262 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H YV+ L + A GII ++G T + T++ + G +A +SV + K+R
Sbjct: 59 HNEHYVTELRQM---APTSGIIYLDGD--TSMSPGTWEAVMRGVGGAVAATESVMSGKHR 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F +RPPGHHA PMGFC F NVAIAARYAQR G++R IIDFDVHHGNGT
Sbjct: 114 N----AFVAVRPPGHHAEIAKPMGFCFFDNVAIAARYAQRTFGIERAAIIDFDVHHGNGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+ D + + STHQ +PGTG E G D + +N PL G R+ F +
Sbjct: 170 QDIFWADKSVMYCSTHQMPLFPGTGARGERGEHD---TIVNAPLASEDGSLEFRSAFENL 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P +F P+L+++SAG+DAH DPLASL + + + +LA G R V L
Sbjct: 227 ILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLG 291
EGGY+L L SV+ A G
Sbjct: 287 EGGYDLQGLKESVSAHVAALTG 308
>gi|390451247|ref|ZP_10236825.1| histone deacetylase superfamily protein [Nitratireductor
aquibiodomus RA22]
gi|389661269|gb|EIM72892.1| histone deacetylase superfamily protein [Nitratireductor
aquibiodomus RA22]
Length = 308
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/246 (43%), Positives = 140/246 (56%), Gaps = 10/246 (4%)
Query: 38 LEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFA 97
L+K +G+ +I+ T + + + +L A G +A VD V + + F
Sbjct: 64 LDKVKASIPDEGLAVIDDD--TTVSPKSLEAALTAIGGALAGVDDVFSGEAGN----VFV 117
Query: 98 LIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDP 157
RPPGHHA MGFC+F N AIAAR+AQ+ HG +R+ I+D+DVHHGNGT D F+DDP
Sbjct: 118 AGRPPGHHAEKNRAMGFCLFNNAAIAARHAQKKHGAERIAIVDWDVHHGNGTQDIFWDDP 177
Query: 158 DIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRF 217
+ + STHQ YPGTG E G G+ +N PLP GSG A R F E ++P RF
Sbjct: 178 SVLYCSTHQMPLYPGTGAAHET----GAGNIVNAPLPAGSGSEAFREAFDEKVLPAIDRF 233
Query: 218 KPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNS 277
PDLI++SAG+DAH DPLA L + + + A L R V LEGGY+L
Sbjct: 234 APDLIIISAGFDAHRRDPLAELNLEADDFDWATGVLMERADRLSQGRVVSLLEGGYDLQG 293
Query: 278 LSYSVA 283
LS SVA
Sbjct: 294 LSVSVA 299
>gi|381209320|ref|ZP_09916391.1| histone deacetylase superfamily protein [Lentibacillus sp. Grbi]
Length = 368
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 174/312 (55%), Gaps = 17/312 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
A+ D+I H+ AY +++ D G+ I G +++ +L +AG +
Sbjct: 67 ATRDEIGMNHSMAYADRIKELSDAGGGDAGVHAIVGP-------DSYEIALKSAGGVLTS 119
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V++V K + +AL+RPPGHHA P+ MGFC+F NVAIAA+YA++ +GLKR+ I+
Sbjct: 120 VETVMEEKAQN----AYALVRPPGHHAEPEEGMGFCLFNNVAIAAKYARQKYGLKRILIL 175
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT AF +D D+ F+S HQ+ +P G G I G+G+GEG +N+ LP G+G
Sbjct: 176 DWDVHHGNGTERAFENDTDVLFMSVHQENIFPKGRGDITYTGKGNGEGYNVNIELPAGTG 235
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D F E+I P ++ P+LI +SAG DA DP+ + T YY +A+ +K+LA+
Sbjct: 236 DEGYLYAFDELIEPIIDQYAPELIFISAGQDASRFDPIGRMLVTADGYYQMASRVKKLAE 295
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE-FD---NPAILYEEPSAKVK 314
R V EGGY+ + + A G+ S + FD + +Y V+
Sbjct: 296 KHSNGRLVAAHEGGYSTAYVPFCTLRVIEALRGKHSPVEDPFDLGFHEGPIYPHQKEAVQ 355
Query: 315 QAIERVKHIHSL 326
+A++ K +L
Sbjct: 356 RAVDVQKVFWNL 367
>gi|408791371|ref|ZP_11202981.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
gi|408462781|gb|EKJ86506.1| histone deacetylase family protein [Leptospira meyeri serovar
Hardjo str. Went 5]
Length = 313
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/282 (38%), Positives = 165/282 (58%), Gaps = 19/282 (6%)
Query: 5 SEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT 64
S+ + K+F A + I+S+H YV + + + ++G ++G T ++
Sbjct: 38 SDLPSKNFLWKKDFLEAPLLVISSIHDPTYVRLVGRVCE---EKGTGYLDGD--TVFSSH 92
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
++ + A GAG+ L D V + G AL+RPPGHHA MGFC+F N+AI A
Sbjct: 93 SYLAASLAVGAGLYLADEVLLGNLKN----GMALVRPPGHHAEADHAMGFCIFNNIAITA 148
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
+Y Q + G+KR+ I+D+DVHHGNGT FY+D ++F+S HQ YPGTG + E G+G G
Sbjct: 149 KYLQ-SKGIKRILILDWDVHHGNGTQHQFYEDDSVYFISLHQFPFYPGTGSLSERGKGKG 207
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR----FKPDLILVSAGYDAHVLDPLASLQ 240
G+TLN+PL G+G+ + F P QR F+P+ +LVSAG+DAH DPL +
Sbjct: 208 IGTTLNIPLARGAGEFEYLSSF-----PSIQREMEKFQPEFVLVSAGFDAHKKDPLGGMN 262
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+T ++ + I+++A R + FLEGGY+LN+L+ SV
Sbjct: 263 LSTSSFGIFTQEIQKIANTYASGRMISFLEGGYDLNALAESV 304
>gi|84500609|ref|ZP_00998858.1| histone deacetylase family protein [Oceanicola batsensis HTCC2597]
gi|84391562|gb|EAQ03894.1| histone deacetylase family protein [Oceanicola batsensis HTCC2597]
Length = 308
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 160/281 (56%), Gaps = 15/281 (5%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDD-IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
E+ G ++ ++ +PA+ DD I H +A++ L A + GI+ ++ TY
Sbjct: 29 EVLKALEGKDLRRVE--APAAADDSILLCHPQAHIDALRAAR---PETGIVQLDAD--TY 81
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ +F+ + G +A VD V + + F RPPGHHA + PMGFC+FGNV
Sbjct: 82 MSPGSFEAACRGVGGAVAAVDMVMSGEVGN----AFVATRPPGHHAETEQPMGFCLFGNV 137
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+A R HGLK+V I+DFDVHHGNGT D +++ D F+STHQ YPGTG E G
Sbjct: 138 AIAARHALRNHGLKKVAIVDFDVHHGNGTQDLLWNEADALFVSTHQMPLYPGTGAQHEQG 197
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G N+PL G+ R + I+P + F+P+++ +SAG+DAH DPLAS+
Sbjct: 198 ---AHGQITNIPLSAGTDGELYRKILANRIIPLIEAFEPEMLFLSAGFDAHRDDPLASIA 254
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+T + + + + A LC R V LEGGY+L +L+ S
Sbjct: 255 LSTEDFQWITEELAKAAARLCEGRIVSCLEGGYDLPALAAS 295
>gi|195130223|ref|XP_002009552.1| GI15174 [Drosophila mojavensis]
gi|193908002|gb|EDW06869.1| GI15174 [Drosophila mojavensis]
Length = 1137
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 159/285 (55%), Gaps = 14/285 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D++ H RA+V+ + + + R+ ++ + G Y TF+ + A+G+ + V
Sbjct: 565 ATTDEVCLAHTRAHVNSVRRLLGRSVEELQQMGAGYNSVYLHPRTFECATLASGSVLQAV 624
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV ++R G +RPPGHHA P P GFC+F N+AIAA+YA R GL+R+ I+D
Sbjct: 625 DSVLRGQSRS----GICNVRPPGHHAEPDQPHGFCIFNNIAIAAQYAIREFGLERILIVD 680
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +P + ++S H+ +P G D VG+ G G +N+P
Sbjct: 681 WDVHHGNGTQHIFESNPKVLYMSIHRYEHGAFFPKGPAGNYDMVGKNAGRGFNVNIPWNK 740
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A F P L+LVSAG+DA + DPL + T Y + +
Sbjct: 741 KGMGDLEYALAFQQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLS 800
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
LA G R + LEGGYN+NS+SY++ + LG+P +F
Sbjct: 801 ALA----GGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQF 841
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 169/313 (53%), Gaps = 24/313 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGII-LIEGSGPTYATATTFQESLAAAGAGIAL 79
A+ D+I +H+ + LE+ +++ + L Y +TF+ SL A+G+ I L
Sbjct: 134 ATKDEILKLHSIEHYERLEQTSGVRNEEAMEELSSHYDAIYIHPSTFKLSLLASGSTIEL 193
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+D + K + G A+IRPPGHHA+ G+C F NVA+AA++A AH L+R+ II
Sbjct: 194 IDQLLLGKAQN----GMAIIRPPGHHAMKSEFNGYCYFNNVALAAQHALEAHQLQRILII 249
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKID--EVGRGDGEGSTLNLPL- 193
D+DVHHG GT FY+D + + S H + GS +P + D +G G G G N+PL
Sbjct: 250 DYDVHHGQGTQRFFYNDSRVLYFSIHRYEHGSFWPNLQESDYHAIGSGPGTGYNFNVPLN 309
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G G+ +F ++++P A ++P+LI+VSAGYDA + P ++ T Y L +
Sbjct: 310 TKGMGNGDYLAIFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMEVTPACYPHLLNPL 369
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL--YEEPSA 311
LA R LEGGY + SLS A + RA LG+P P ++ E PS
Sbjct: 370 LHLAN----CRVAVVLEGGYCVESLSEGAALTLRALLGDPC-------PPLVERLELPSM 418
Query: 312 KVKQAIERVKHIH 324
++++++ ++H
Sbjct: 419 ELRESVLNCIYVH 431
>gi|161618402|ref|YP_001592289.1| histone deacetylase superfamily protein [Brucella canis ATCC 23365]
gi|163842710|ref|YP_001627114.1| histone deacetylase superfamily protein [Brucella suis ATCC 23445]
gi|225851966|ref|YP_002732199.1| histone deacetylase superfamily protein [Brucella melitensis ATCC
23457]
gi|256264526|ref|ZP_05467058.1| histone deacetylase [Brucella melitensis bv. 2 str. 63/9]
gi|260563504|ref|ZP_05833990.1| histone deacetylase family protein [Brucella melitensis bv. 1 str.
16M]
gi|260566965|ref|ZP_05837435.1| histone deacetylase family protein [Brucella suis bv. 4 str. 40]
gi|261751774|ref|ZP_05995483.1| histone deacetylase superfamily protein [Brucella suis bv. 5 str.
513]
gi|265994389|ref|ZP_06106946.1| histone deacetylase superfamily protein [Brucella melitensis bv. 3
str. Ether]
gi|384210816|ref|YP_005599898.1| histone deacetylase superfamily protein [Brucella melitensis M5-90]
gi|384444532|ref|YP_005603251.1| histone deacetylase family protein [Brucella melitensis NI]
gi|161335213|gb|ABX61518.1| histone deacetylase superfamily [Brucella canis ATCC 23365]
gi|163673433|gb|ABY37544.1| histone deacetylase superfamily [Brucella suis ATCC 23445]
gi|225640331|gb|ACO00245.1| histone deacetylase superfamily protein [Brucella melitensis ATCC
23457]
gi|260153520|gb|EEW88612.1| histone deacetylase family protein [Brucella melitensis bv. 1 str.
16M]
gi|260156483|gb|EEW91563.1| histone deacetylase family protein [Brucella suis bv. 4 str. 40]
gi|261741527|gb|EEY29453.1| histone deacetylase superfamily protein [Brucella suis bv. 5 str.
513]
gi|262765502|gb|EEZ11291.1| histone deacetylase superfamily protein [Brucella melitensis bv. 3
str. Ether]
gi|263094859|gb|EEZ18597.1| histone deacetylase [Brucella melitensis bv. 2 str. 63/9]
gi|326538179|gb|ADZ86394.1| histone deacetylase superfamily protein [Brucella melitensis M5-90]
gi|349742528|gb|AEQ08071.1| histone deacetylase family protein [Brucella melitensis NI]
Length = 316
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|298675423|ref|YP_003727173.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298288411|gb|ADI74377.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 337
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 163/293 (55%), Gaps = 18/293 (6%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
+E F+ ++E + A + I ++H Y+ +E + I T
Sbjct: 32 LEKQDVFKNHPLVEP---NTAEISQIQTIHTPDYIKKVEYHCNNE-------IPLDPDTV 81
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ +++ +L AAG I V+ + + FAL+RPPGHHA GFC+F N+
Sbjct: 82 VSKDSYRAALLAAGGSIRAVNETYTNNS------AFALVRPPGHHAESDRAKGFCLFNNI 135
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAA+YAQ + G+KRV IID+DVHHGNGT +FY D + ++STH+ +PGTG +DE G
Sbjct: 136 AIAAKYAQ-SQGMKRVLIIDWDVHHGNGTQHSFYSDSTVMYMSTHRYPWFPGTGWMDETG 194
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G+GEG +N+PL GS D VF ++ +P A +F+PD+I+VSAG DA D L ++
Sbjct: 195 SGEGEGYNINVPLFAGSTDDEYAYVFDKIFMPVALQFQPDIIMVSAGMDAQENDMLGGMK 254
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
T+ + LA IK++A DL + + LEGGY L+ S+ A EP
Sbjct: 255 LTSEGFATLAGYIKRIA-DLTCKQFILVLEGGYQHEKLAESIYQVITAINSEP 306
>gi|261324559|ref|ZP_05963756.1| histone deacetylase superfamily protein [Brucella neotomae 5K33]
gi|261300539|gb|EEY04036.1| histone deacetylase superfamily protein [Brucella neotomae 5K33]
Length = 316
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSRSAS 307
>gi|86751556|ref|YP_488052.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
HaA2]
gi|86574584|gb|ABD09141.1| Histone deacetylase superfamily [Rhodopseudomonas palustris HaA2]
Length = 309
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 148/270 (54%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S++ IA H ++ + A GI+ ++G T + TF+ +L G ++ VD
Sbjct: 51 SLEHIALCHTDHHIVEMRHM---APSTGIVYVDGD--TSMSPGTFEAALRGVGGAVSAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V + F RPPGHHA PMGFC FGN AIAARYAQR +G++R ++DF
Sbjct: 106 AVM----KGSAANAFVATRPPGHHAEVTKPMGFCFFGNAAIAARYAQRKYGIERAAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PGTG E G D + +N PL G
Sbjct: 162 DVHHGNGTQDIFWGDRTVMYCSTHQMPLFPGTGSAGERGEHD---NIVNAPLASEDGGKE 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F VI+P RF P+LI++SAG+DAH DPLASL + + + ++A
Sbjct: 219 FRFAFETVILPQLTRFAPELIVISAGFDAHYRDPLASLNLKAEDFTWVTQKLMEVADKTA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L LS SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLQGLSESVAAHVGALMG 308
>gi|386397239|ref|ZP_10082017.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM1253]
gi|385737865|gb|EIG58061.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. WSM1253]
Length = 309
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 149/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A G++ I+G T + T++ + G +A ++
Sbjct: 52 LDLVTLCHNEHYVTELRHI---APTSGLVYIDGD--TSMSPGTWEAVMRGVGGAVAATEA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V ++R F +RPPGHHA PMGFC F NVAIAAR+AQR +G+KR I+DFD
Sbjct: 107 VMNGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNVAIAARHAQRKYGIKRAAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL G
Sbjct: 163 VHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKSE--RGDHD-TIVNAPLASEDGGPEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R F +I+P ++F P+L+++SAG+DAH DPLASL Y + + LA G
Sbjct: 220 RIAFESLILPQLEKFSPELLVISAGFDAHYRDPLASLNLRAEDYAWVTRKLMDLADKTAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SV A +G
Sbjct: 280 GRVVSVLEGGYDLQGLKESVTAHVGALMG 308
>gi|337287997|ref|YP_004627469.1| histone deacetylase superfamily [Thermodesulfobacterium sp. OPB45]
gi|334901735|gb|AEH22541.1| histone deacetylase superfamily [Thermodesulfobacterium geofontis
OPF15]
Length = 350
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 128/197 (64%), Gaps = 1/197 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHHA MGFC+F NVAIAA YA+ +GLK++ I+D+D+HHGNGT +FY
Sbjct: 117 FALVRPPGHHAEKDRAMGFCLFNNVAIAAYYAKNYYGLKKILIVDWDLHHGNGTQKSFYS 176
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP++ + S HQ YPGTG E+G G G G TLN+PLP GD +F E + P A
Sbjct: 177 DPEVLYFSVHQYPYYPGTGHYSEIGEGKGIGFTLNVPLPAYCGDEEYIYIFKEFLGPIAL 236
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGT-YYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+F+P++I+VSAG+D DPL +++ T ML +K +A+ C R +F LEGGYN
Sbjct: 237 QFEPEIIMVSAGFDLCEGDPLGNMEVTPHFGIPMLTLILKNIAEKTCQGRILFTLEGGYN 296
Query: 275 LNSLSYSVADSFRAFLG 291
+L SVA+ FLG
Sbjct: 297 AVNLQESVANLILTFLG 313
>gi|15789452|ref|NP_279276.1| acetoin utilization protein [Halobacterium sp. NRC-1]
gi|169235167|ref|YP_001688367.1| histone deacetylase [Halobacterium salinarum R1]
gi|10579782|gb|AAG18756.1| acetoin utilization protein [Halobacterium sp. NRC-1]
gi|167726233|emb|CAP13013.1| HdaI-type histone deacetylase [Halobacterium salinarum R1]
Length = 338
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 118/304 (38%), Positives = 165/304 (54%), Gaps = 17/304 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A + DI +VH Y + + +R T AT +T+ A+AG + +
Sbjct: 46 ADLSDITAVHDPDYATEVRSFCERGGGSW------DPDTAATESTWPAIRASAGLAMDAI 99
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+ + D P F+L RPPGHHAI MGFC N A+AA++A AHGL RV I D
Sbjct: 100 DAALDGADGRDTP--FSLGRPPGHHAITDDAMGFCFVNNAAVAAQHALDAHGLDRVAIFD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT D FYD D+F+ S H+DG YPGTG + + G DG G+TLNLP P G+GD
Sbjct: 158 WDVHHGNGTQDIFYDRGDVFYTSIHEDGLYPGTGSVAQTGDCDGAGTTLNLPFPTGAGDA 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ I P + F PDL +VSAG+DAH DP++ L +T Y ML +++++
Sbjct: 218 DYAAAVDDFIAPAIRAFDPDLFVVSAGFDAHHHDPISRLHLSTEGYAMLTDRVRRISA-R 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERV 320
+ F LEGGY+L++L+ V+ F G +P ++ S V+ ERV
Sbjct: 277 TDAPLAFVLEGGYSLDTLADGVSTVHETFDGR--------DPTEPEDDVSDSVRDLFERV 328
Query: 321 KHIH 324
+ H
Sbjct: 329 RDTH 332
>gi|265990559|ref|ZP_06103116.1| histone deacetylase superfamily protein [Brucella melitensis bv. 1
str. Rev.1]
gi|263001343|gb|EEZ13918.1| histone deacetylase superfamily protein [Brucella melitensis bv. 1
str. Rev.1]
Length = 316
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMKRAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|381211229|ref|ZP_09918300.1| histone deacetylase superfamily protein [Lentibacillus sp. Grbi]
Length = 368
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 175/316 (55%), Gaps = 25/316 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESL 70
EL+ SP A+ +I H++ Y++ +++ D G+ I G +++ +L
Sbjct: 58 ELQQISPREATRQEILINHSKEYINKIKELSDAGGGDAGVHAIVGP-------DSYEIAL 110
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
+AG + VD+V + + +AL+RPPGHHA P MGFC+F NVAIAA+YA+
Sbjct: 111 KSAGGVMTSVDAVMEEEVQN----AYALVRPPGHHAEPAEGMGFCLFNNVAIAAKYAREK 166
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTL 189
+GLKR+ I+D+DVHHGNGT AF +D D+ F+S HQ+ +P G I G+GDGEG T+
Sbjct: 167 YGLKRIAILDWDVHHGNGTETAFENDSDVLFISVHQENIFPKDRGAITYTGKGDGEGYTV 226
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+ LP G+GD F ++I P ++ P+LI +SAG DA DP+ + T Y+ +
Sbjct: 227 NIELPAGTGDEGYFYAFDQLIAPVFDQYAPELIFISAGQDASRFDPIGRMSVTAEGYFQM 286
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP------- 302
+ IK+LA+ +R + EGGY+ + + A G K S+ D+P
Sbjct: 287 SKRIKKLAEKHSSNRIIACHEGGYSTAYVPFCTLRVIEALKG---KRSQVDDPFDQGFHE 343
Query: 303 AILYEEPSAKVKQAIE 318
+Y V++AIE
Sbjct: 344 GPIYPHQKEAVQRAIE 359
>gi|392382244|ref|YP_005031441.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
brasilense Sp245]
gi|356877209|emb|CCC98018.1| putative deacetylase; histone deacetylase superfamily [Azospirillum
brasilense Sp245]
Length = 309
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/272 (41%), Positives = 149/272 (54%), Gaps = 16/272 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A V+ + VH AYV + A+ + + T + T+ L AAGA A V
Sbjct: 50 AEVEQLRWVHDPAYVDAVLNAVPDSGHARL-----DADTVLSPTSRSAILRAAGAVCAAV 104
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V +KN F +RP GHHA P MGFCVF NVA+ A +A++ GL RV +
Sbjct: 105 DAVLDGTAKN------AFCAVRPCGHHAEPARAMGFCVFNNVAVGAEHARKRRGLTRVAV 158
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+D+DVHHGNGT F+DD D+FF STHQ YPGTG + E G D + +N PLP SG
Sbjct: 159 VDYDVHHGNGTQAMFWDDADLFFASTHQSPLYPGTGSMSETGVAD---NIVNAPLPPHSG 215
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
R I+P + F+P+LIL+SAG+DAH DPLASL FT + + + A
Sbjct: 216 TVEFRQAMERRILPALEEFQPELILISAGFDAHARDPLASLNFTGPDFEWATRKLVEAAD 275
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
LC R V LEGGY++ L+ A +A +
Sbjct: 276 RLCDGRVVTVLEGGYDMVGLAEGCAAHLQALM 307
>gi|110667399|ref|YP_657210.1| histone deacetylase [Haloquadratum walsbyi DSM 16790]
gi|385802825|ref|YP_005839225.1| histone deacetylase [Haloquadratum walsbyi C23]
gi|109625146|emb|CAJ51565.1| HdaI-type histone deacetylase [Haloquadratum walsbyi DSM 16790]
gi|339728317|emb|CCC39463.1| HdaI-type histone deacetylase [Haloquadratum walsbyi C23]
Length = 337
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 174/310 (56%), Gaps = 21/310 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG-AGIA 78
PA+ DIASVH Y++ + + + T A+ T+ +LA+AG A A
Sbjct: 45 PATDTDIASVHDTEYITEIREFCECGGGNW------DPDTVASIDTWDAALASAGLAQWA 98
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR--YAQRAHGLKRV 136
+V + R P F++ RPPGHHA+ MGFC N A+AA+ + +
Sbjct: 99 ARVAVNGASGRQTP---FSVGRPPGHHAVVDDAMGFCFINNAAVAAQTLIDDPSSDVDTA 155
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG 196
I D+DVHHGNGT D FYD+ ++ ++STH++G YPGTG+I+E G GD EG+TLN+PL G
Sbjct: 156 AIFDWDVHHGNGTQDIFYDNANVLYVSTHEEGLYPGTGEIEETGTGDAEGTTLNIPLSAG 215
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
+GD + + +I P + F PDL ++SAG+DAH DP++ ++ +T Y +L ++ L
Sbjct: 216 AGDAEYLHMINTIIRPVIESFNPDLFIISAGFDAHRHDPISRMRVSTEGYALLTDRVRSL 275
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQA 316
A D+ + F LEGGY L++L+ V+ F G A + +EP +VK
Sbjct: 276 ANDV-DAGLAFVLEGGYGLDTLADGVSIVHETFDGRTPLAHD--------DEPDEEVKTL 326
Query: 317 IERVKHIHSL 326
+ ++ IH++
Sbjct: 327 ADDIRTIHNI 336
>gi|381165919|ref|ZP_09875138.1| putative deacetylase [Phaeospirillum molischianum DSM 120]
gi|380684903|emb|CCG39950.1| putative deacetylase [Phaeospirillum molischianum DSM 120]
Length = 310
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/196 (47%), Positives = 126/196 (64%), Gaps = 3/196 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F ++RPPGHHA MGFC F N AIAA +A+ AHG KRV ++DFDVHHGNGT +D
Sbjct: 117 FCVVRPPGHHAEISTAMGFCFFNNAAIAALHARDAHGFKRVAVVDFDVHHGNGTQQILWD 176
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
P F+ STHQ+ +YP TG DE G G+G +N+PLP G+G R F ++++P +
Sbjct: 177 QPGTFYASTHQEHAYPDTGSADETG---GKGMIVNIPLPAGTGSADFRMAFGDMLIPRLR 233
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F PD +++SAG+DAH DPLA L+ TT + I Q+A++ G R V LEGGY+L
Sbjct: 234 AFAPDFVIISAGFDAHASDPLAHLRLTTADFGWATREILQVAEEYAGRRVVSVLEGGYDL 293
Query: 276 NSLSYSVADSFRAFLG 291
+L+ S + RA +G
Sbjct: 294 RALADSAREHVRALMG 309
>gi|448342699|ref|ZP_21531645.1| histone deacetylase superfamily protein [Natrinema gari JCM 14663]
gi|445625094|gb|ELY78464.1| histone deacetylase superfamily protein [Natrinema gari JCM 14663]
Length = 343
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 168/318 (52%), Gaps = 23/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ AA
Sbjct: 38 VEYVEADPCDLDRMATVHERDYLESVRE----------FCADGGGSWDPDTTAVEETWAA 87
Query: 73 --AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
AG+A + AA + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 IRRSAGLACWAAEAALEGATGRDTPFSIGRPPGHHAVSDNAMGFCFVDNVAVAAQHALDH 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + RV IID+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G GEG+T
Sbjct: 148 DAYDVDRVAIIDWDVHHGNGTQDIFYDRDDVFFVSLHEQGLYPGTGDIDETGTRAGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDRDYLAALEGPITAALTDFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L+ ++ LA + F LEGGY L+ L+ SVA F G P +E
Sbjct: 268 LSDRVRSLAA-DTDAALAFVLEGGYGLDVLADSVALVHETFDGR--------EPIEPDDE 318
Query: 309 PSAKVKQAIERVKHIHSL 326
P K K A++ V H L
Sbjct: 319 PGDKAKAALKDVIDAHGL 336
>gi|376274812|ref|YP_005115251.1| histone deacetylase superfamily protein [Brucella canis HSK A52141]
gi|384407915|ref|YP_005596536.1| histone deacetylase superfamily protein [Brucella melitensis M28]
gi|326408462|gb|ADZ65527.1| histone deacetylase superfamily protein [Brucella melitensis M28]
gi|363403379|gb|AEW13674.1| histone deacetylase superfamily protein [Brucella canis HSK A52141]
Length = 322
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 79 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 130
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 131 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 190
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 191 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 246
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 247 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 306
Query: 277 SLSYSVA 283
LS S +
Sbjct: 307 GLSQSAS 313
>gi|294851808|ref|ZP_06792481.1| acetylspermidine deacetylase [Brucella sp. NVSL 07-0026]
gi|294820397|gb|EFG37396.1| acetylspermidine deacetylase [Brucella sp. NVSL 07-0026]
Length = 337
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 153/290 (52%), Gaps = 21/290 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV------HARAYVSGL-EKAMDRASQQGIILIEG 55
L SE G + L + A + H A S + E D + Q I+ ++G
Sbjct: 51 LMSELEGPDFYRLDRVEAPHAGEAAILLAHPEEHLEAVRSKIPEPVEDGEASQPIVKLDG 110
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
TY + + +L A GA +A VD V A+ N F RPPGHHA MG
Sbjct: 111 D--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------FVASRPPGHHAERSRAMG 162
Query: 114 FCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT 173
FCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DDP + F STHQ YPG+
Sbjct: 163 FCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDDPGVMFCSTHQFPLYPGS 222
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G E G G+ +N PL +G R F+ I+P F+PDLILVSAG+DAH
Sbjct: 223 GDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDNFRPDLILVSAGFDAHFR 278
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA + + + + A+ C R V LEGGY+L LS S +
Sbjct: 279 DPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSAS 328
>gi|306845059|ref|ZP_07477639.1| histone deacetylase superfamily protein [Brucella inopinata BO1]
gi|306274474|gb|EFM56269.1| histone deacetylase superfamily protein [Brucella inopinata BO1]
Length = 316
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 153/290 (52%), Gaps = 21/290 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV------HARAYVSGL-EKAMDRASQQGIILIEG 55
L SE G + L + A + H A S + E D + Q I+ ++G
Sbjct: 30 LMSELEGPDFYRLDRVEAPRAGETAILLAHPEEHLEAVRSKIPEPVEDGEAPQPIVKLDG 89
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
TY + + +L A GA +A VD V A+ N F RPPGHHA MG
Sbjct: 90 D--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------FVASRPPGHHAERSRAMG 141
Query: 114 FCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT 173
FC+F N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DDP + F STHQ YPG+
Sbjct: 142 FCIFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDDPGVMFCSTHQFPLYPGS 201
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G E G G+ +N PL +G R F+ I+P F+PDLIL+SAG+DAH
Sbjct: 202 GDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDNFRPDLILISAGFDAHFR 257
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA + + + + A+ C R V LEGGY+L LS S +
Sbjct: 258 DPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSAS 307
>gi|27377764|ref|NP_769293.1| hypothetical protein bll2653 [Bradyrhizobium japonicum USDA 110]
gi|27350909|dbj|BAC47918.1| bll2653 [Bradyrhizobium japonicum USDA 110]
Length = 309
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A G++ I+G T + T++ + G +A ++
Sbjct: 52 LDLVTLCHNEHYVTELRHI---APSSGLVYIDGD--TSMSPGTWEAVMRGVGGAVAATEA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V A ++R F +RPPGHHA PMGFC F NVAIAAR+AQR +G+ R I+DFD
Sbjct: 107 VMAGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNVAIAARHAQRKYGITRAAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL G
Sbjct: 163 VHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKGE--RGDHD-TIVNAPLASEDGGPEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R+ F +I+P ++F P+L+++SAG+DAH DPLASL Y + + LA G
Sbjct: 220 RSAFENLILPQLEKFSPELLIISAGFDAHYRDPLASLNLRAEDYAWVTRKLMDLADRTAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SV A +G
Sbjct: 280 GRVVSVLEGGYDLQGLKESVTAHVGALMG 308
>gi|359407373|ref|ZP_09199850.1| deacetylase, histone deacetylase/acetoin utilization protein
[SAR116 cluster alpha proteobacterium HIMB100]
gi|356677412|gb|EHI49756.1| deacetylase, histone deacetylase/acetoin utilization protein
[SAR116 cluster alpha proteobacterium HIMB100]
Length = 313
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 146/262 (55%), Gaps = 8/262 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS + + SVH Y+ G+ + A L + TYA + + +L AG LV
Sbjct: 50 ASYEQLCSVHTPTYIDGILSELAPAGLSAQTLHQIDADTYAGPDSLEAALRGAGGACYLV 109
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + GF+ +RPPGHHA P MGFC+F + AIAAR+AQ +G RV ++D
Sbjct: 110 DRVMTEGGK-----GFSAMRPPGHHAEPDRAMGFCLFSSAAIAARHAQLTYGAGRVAVLD 164
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT AF+D D+ + S+HQ YPGTG DE G G+ NL +
Sbjct: 165 FDVHHGNGTQAAFWDQSDLIYASSHQMPLYPGTGAADEAG---AHGNIFNLSFAAETSGA 221
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ + + ++P + +PDLI++SAG+DAH DPL L TT + L A+I LA D
Sbjct: 222 DILKGWRQHLLPAVAKTQPDLIIISAGFDAHEDDPLGGLNMTTADFAALTADIAGLAADC 281
Query: 261 CGSRCVFFLEGGYNLNSLSYSV 282
C R + LEGGYNL++L SV
Sbjct: 282 CDGRLISVLEGGYNLDALGASV 303
>gi|398951631|ref|ZP_10674204.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
gi|398156275|gb|EJM44698.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM33]
Length = 370
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 151/267 (56%), Gaps = 28/267 (10%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA------ 71
FSPAS D+ VH YV DR ++ +GP ++ A + +
Sbjct: 58 FSPASESDLLRVHTPEYV-------DR-------ILNPTGPVWSDAGDGETPVGPGSADI 103
Query: 72 ---AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
AAGA I+ ++V + +ALIRPPGHHAI MG+C+F N A+ R+ Q
Sbjct: 104 ARLAAGAVISAFNAVVSGTVTN----AYALIRPPGHHAIASQGMGYCIFHNTAVGIRHLQ 159
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGS 187
+ +KRV +ID+DVHHGNGT FYDDP + +S HQD YP G GK+ ++G G G G+
Sbjct: 160 QTGAVKRVAVIDWDVHHGNGTETLFYDDPSVLTISLHQDDLYPIGRGKVQDIGTGPGMGA 219
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
LN+PLP GSG A F V++P +RF+PDLI++++G+D+ +DP +G Y
Sbjct: 220 NLNIPLPAGSGRGAYLGAFERVVMPAVRRFQPDLIVIASGFDSAAMDPFGRQLLYSGAYR 279
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYN 274
L + LA+++C SR V EGGY+
Sbjct: 280 ELTTQVMNLAEEVCKSRVVAVHEGGYD 306
>gi|225626938|ref|ZP_03784977.1| acetylspermidine deacetylase [Brucella ceti str. Cudo]
gi|265988143|ref|ZP_06100700.1| histone deacetylase [Brucella pinnipedialis M292/94/1]
gi|340790071|ref|YP_004755535.1| histone deacetylase family protein [Brucella pinnipedialis B2/94]
gi|225618595|gb|EEH15638.1| acetylspermidine deacetylase [Brucella ceti str. Cudo]
gi|264660340|gb|EEZ30601.1| histone deacetylase [Brucella pinnipedialis M292/94/1]
gi|340558529|gb|AEK53767.1| histone deacetylase family protein [Brucella pinnipedialis B2/94]
Length = 337
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 94 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 145
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 146 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 205
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 206 PGVMFCSTHQFPLYPGSGNKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 261
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 262 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 321
Query: 277 SLSYSVA 283
LS S +
Sbjct: 322 GLSQSAS 328
>gi|23501331|ref|NP_697458.1| histone deacetylase [Brucella suis 1330]
gi|261754429|ref|ZP_05998138.1| histone deacetylase superfamily protein [Brucella suis bv. 3 str.
686]
gi|376280120|ref|YP_005154126.1| histone deacetylase family protein [Brucella suis VBI22]
gi|384224114|ref|YP_005615278.1| histone deacetylase family protein [Brucella suis 1330]
gi|23347222|gb|AAN29373.1| histone deacetylase family protein [Brucella suis 1330]
gi|261744182|gb|EEY32108.1| histone deacetylase superfamily protein [Brucella suis bv. 3 str.
686]
gi|343382294|gb|AEM17786.1| histone deacetylase family protein [Brucella suis 1330]
gi|358257719|gb|AEU05454.1| histone deacetylase family protein [Brucella suis VBI22]
Length = 337
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 94 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADN------VF 145
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DD
Sbjct: 146 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDD 205
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 206 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 261
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 262 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 321
Query: 277 SLSYSVA 283
LS S +
Sbjct: 322 GLSQSAS 328
>gi|398346206|ref|ZP_10530909.1| acetoin-histone deacetylase [Leptospira broomii str. 5399]
Length = 339
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 145/247 (58%), Gaps = 11/247 (4%)
Query: 41 AMDRASQQGIILIEGS-----GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLG 95
A +R Q+ + IEG G T + +F+ +L AAG+G++L + + D G
Sbjct: 90 AHNRTYQERFVAIEGKRGGFDGDTPFSPKSFEAALLAAGSGVSLAKQILSE----DLDSG 145
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
ALIRPPGHHA MGFC+ N+AI A Y ++RV+I+D+DVHHGNGT + FYD
Sbjct: 146 IALIRPPGHHAETGRAMGFCLLNNIAITAHYLLN-RNIRRVYILDWDVHHGNGTQEIFYD 204
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
+FF S HQ YPG+G E+G G G G TLN+PLPG S ++ F E ++P
Sbjct: 205 SDKVFFTSLHQYPFYPGSGSAREIGSGQGLGFTLNIPLPGSSSNSDYLQAFQEKVIPSIL 264
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P+ +L+SAG+DAH DPL + +T + K+ A GS+ + FLEGGY+L
Sbjct: 265 EFEPEFLLISAGFDAHKQDPLGGMSLSTNAFSEFTRLAKEAASQ-SGSKIISFLEGGYDL 323
Query: 276 NSLSYSV 282
+L+ SV
Sbjct: 324 QALAESV 330
>gi|17987787|ref|NP_540421.1| acetylspermidine deacetylase [Brucella melitensis bv. 1 str. 16M]
gi|256368885|ref|YP_003106391.1| histone deacetylase family protein [Brucella microti CCM 4915]
gi|261213454|ref|ZP_05927735.1| histone deacetylase [Brucella abortus bv. 3 str. Tulya]
gi|17983511|gb|AAL52685.1| acetylspermidine deacetylase [Brucella melitensis bv. 1 str. 16M]
gi|255999043|gb|ACU47442.1| histone deacetylase family protein [Brucella microti CCM 4915]
gi|260915061|gb|EEX81922.1| histone deacetylase [Brucella abortus bv. 3 str. Tulya]
Length = 337
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 153/290 (52%), Gaps = 21/290 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV------HARAYVSGL-EKAMDRASQQGIILIEG 55
L SE G + L + A + H A S + E D + Q I+ ++G
Sbjct: 51 LMSELEGPDFYRLDRVEAPHAGEAAILLAHPEEHLEAVRSKIPEPVEDGEASQPIVKLDG 110
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
TY + + +L A GA +A VD V A+ N F RPPGHHA MG
Sbjct: 111 D--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------FVASRPPGHHAERSRAMG 162
Query: 114 FCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT 173
FCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F DDP + F STHQ YPG+
Sbjct: 163 FCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKDDPGVMFCSTHQFPLYPGS 222
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G E G G+ +N PL +G R F+ I+P F+PDLIL+SAG+DAH
Sbjct: 223 GDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDNFRPDLILISAGFDAHFR 278
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA + + + + A+ C R V LEGGY+L LS S +
Sbjct: 279 DPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSAS 328
>gi|398821068|ref|ZP_10579558.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. YR681]
gi|398228265|gb|EJN14397.1| deacetylase, histone deacetylase/acetoin utilization protein
[Bradyrhizobium sp. YR681]
Length = 309
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A G + ++G T + T++ + G +A ++
Sbjct: 52 LDLVTLCHNEHYVTELRHI---APTSGQVYVDGD--TSMSPGTWEAVMRGVGGAVAATEA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V ++R F +RPPGHHA PMGFC F NVAIAAR+AQR +G+KRV I+DFD
Sbjct: 107 VMNGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNVAIAARHAQRKYGIKRVAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL G
Sbjct: 163 VHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKGE--RGDHD-TIVNAPLASEDGGPEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R+ F +I+P ++F P+L+++SAG+DAH DPLASL Y + + LA G
Sbjct: 220 RSAFENLILPQLEKFSPELLVISAGFDAHYRDPLASLNLRAEDYTWVTRKLMDLADKSAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SV A +G
Sbjct: 280 GRVVSVLEGGYDLQGLKESVTAHVGALMG 308
>gi|333984291|ref|YP_004513501.1| histone deacetylase superfamily protein [Methylomonas methanica
MC09]
gi|333808332|gb|AEG01002.1| histone deacetylase superfamily [Methylomonas methanica MC09]
Length = 309
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 139/225 (61%), Gaps = 8/225 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T A+ + +L A GA VD++ + + F +RPPGHHA+P PMGFC+F
Sbjct: 85 TVASPGSKSAALRAVGAVCDAVDTLCTDRAQ----QAFCAVRPPGHHAMPGYPMGFCLFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N+AIAA YA+ +GL+R+ I+DFDVHHGNGT AFY P + + S+HQ YPG+G E
Sbjct: 141 NIAIAAEYARSQYGLERIAIVDFDVHHGNGTQAAFYSQPQVLYASSHQWPHYPGSGHPSE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
+G G+ +N+PLP G+ R + ++I+P ++F P L+L+SAG+DAH DPLAS
Sbjct: 201 ----NGVGNIINVPLPTGTDGKTFRAKYTDIILPAVRKFNPQLLLISAGFDAHKDDPLAS 256
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
L+ Y + ++ +A C R + LEGGYN+ +LS SVA
Sbjct: 257 LRLVEDDYAWVTRQLRDIADATCNGRIISALEGGYNIPALSASVA 301
>gi|84514698|ref|ZP_01002062.1| histone deacetylase family protein [Loktanella vestfoldensis SKA53]
gi|84511749|gb|EAQ08202.1| histone deacetylase family protein [Loktanella vestfoldensis SKA53]
Length = 307
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/192 (52%), Positives = 120/192 (62%), Gaps = 4/192 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FA +RPPGHHA + PMGFC FGNVA+ A++A HGL RV I+DFDVHHGNGT D D
Sbjct: 113 FAAVRPPGHHAERETPMGFCFFGNVAVGAKHALDHHGLARVAIVDFDVHHGNGTQDLVED 172
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP I F STHQ YPGTG DE G G+ LN+PLP G+G R V V++P
Sbjct: 173 DPRILFCSTHQSPLYPGTGAADET----GVGNVLNVPLPAGTGSRTFRDVMDRVVLPRVD 228
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F P+LIL+SAG+DAH DPLA L+ T + + A + LA C R V LEGGY+L
Sbjct: 229 AFAPELILISAGFDAHRDDPLAGLELTEDDFAWVTARLCDLADSHCHGRVVSALEGGYDL 288
Query: 276 NSLSYSVADSFR 287
+L S A R
Sbjct: 289 PALGASAAAHVR 300
>gi|91203564|emb|CAJ71217.1| similar to histone deacetylase [Candidatus Kuenenia
stuttgartiensis]
Length = 313
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 152/267 (56%), Gaps = 10/267 (3%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
++I +H + Y+S +++ D S G + G T + ++ +L +AGA + +D +
Sbjct: 53 EEIGFIHPKTYISTIQQIAD--SGGGWL----DGDTAVSGHSYNVALYSAGAALTAIDLI 106
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
+ + F L+RPPGHHA P MGFC+F NVAIAARY Q+ + KR+ IID+DV
Sbjct: 107 MKGEAKN----AFCLVRPPGHHATPDRGMGFCLFNNVAIAARYLQKNYQQKRILIIDWDV 162
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT DAFY DP + + S H+ YPGTG DE G G+G+G +N+PL +
Sbjct: 163 HHGNGTQDAFYVDPTVMYFSMHRYPFYPGTGAEDETGEGNGKGFNINIPLSMDTHPQKYI 222
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+F VI RF P+ I++S+G+DA+ DP+ L T +Y L + + A+ CG
Sbjct: 223 ELFSGVIEGSVNRFAPEFIILSSGFDAYKKDPIGGLNLETEHFYTLTEIVVEAAEKHCGG 282
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ + LEGGY+L+ L + + L
Sbjct: 283 KLLSCLEGGYHLSGLPLCIEAHLKGLL 309
>gi|116619442|ref|YP_821598.1| histone deacetylase superfamily protein [Candidatus Solibacter
usitatus Ellin6076]
gi|116222604|gb|ABJ81313.1| histone deacetylase superfamily [Candidatus Solibacter usitatus
Ellin6076]
Length = 312
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 132/221 (59%), Gaps = 4/221 (1%)
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFC 115
+G T T ++ ++ A+G + VD+V R F +RPPGHHA MGFC
Sbjct: 81 TGDTDITPNSWDVAVRASGGVLNAVDAVLTGAARN----AFCAVRPPGHHANAARGMGFC 136
Query: 116 VFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGK 175
+ NVAIAARYAQR HG++RV I+D+DVHHGNGT D FY + +FF STHQ YPGTG+
Sbjct: 137 LLNNVAIAARYAQRRHGIERVAIVDWDVHHGNGTQDIFYREGSVFFFSTHQWPLYPGTGR 196
Query: 176 IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
DE G G GEG+T+N P P GSG + + + P +RF+P+L+L+SAG+D+ D
Sbjct: 197 ADETGEGPGEGTTMNFPFPAGSGRSQILGAVENSLAPALERFRPELVLISAGFDSREGDL 256
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
L T + L + +A G R V LEGGYNL+
Sbjct: 257 LGRFTLTDEDFTDLTGAVMGIADRHAGGRLVSMLEGGYNLD 297
>gi|338532993|ref|YP_004666327.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
gi|337259089|gb|AEI65249.1| histone deacetylase family protein [Myxococcus fulvus HW-1]
Length = 341
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 138/224 (61%), Gaps = 5/224 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T+ + + + AAGA + V++V + R FAL+RPPGHHA P MGFC++
Sbjct: 82 THVSPDSIDAARLAAGASVQAVEAVMRGEARN----AFALVRPPGHHAEPDKAMGFCLYN 137
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAA A R G +RV ++D+DVHHGNGT AF+ D+ + S HQ YPGTG E
Sbjct: 138 NAAIAAE-AGRKLGAERVLVLDWDVHHGNGTQAAFWSRRDVMYQSVHQFPYYPGTGAAQE 196
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G+GEG T+N+ LPGG+ D +F E+++P A+ ++P LILVSAG+D+H DP+
Sbjct: 197 TGTGEGEGYTVNVGLPGGNSDADYGMIFEELLLPVAEAYRPQLILVSAGFDSHQHDPIGG 256
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ + + + + +K LA +C R V LEGGY+L LS SV
Sbjct: 257 MDVSERGFAAMCSAMKSLADSVCQGRLVLLLEGGYSLEGLSQSV 300
>gi|265983585|ref|ZP_06096320.1| histone deacetylase superfamily protein [Brucella sp. 83/13]
gi|306839874|ref|ZP_07472672.1| histone deacetylase superfamily protein [Brucella sp. NF 2653]
gi|264662177|gb|EEZ32438.1| histone deacetylase superfamily protein [Brucella sp. 83/13]
gi|306405060|gb|EFM61341.1| histone deacetylase superfamily protein [Brucella sp. NF 2653]
Length = 316
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 140/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEAPQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D+DVHHGNGT D F +D
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDWDVHHGNGTQDIFKED 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCNHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|339000109|ref|ZP_08638731.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
gi|338762984|gb|EGP17994.1| histone deacetylase superfamily protein [Halomonas sp. TD01]
Length = 362
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 115/268 (42%), Positives = 159/268 (59%), Gaps = 13/268 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++++ A+ D +A VH +Y+S D S +G T + + + A
Sbjct: 67 LQIEGGKAATHDQLARVHTTSYLS------DIFSLRGKNAWLDVDTTAVSPGSIDAAEVA 120
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA V++V + + FALIRPPGHHA P GFC+F NVA+AA +A+ A G
Sbjct: 121 AGTAIAAVEAVMDKRTQS----AFALIRPPGHHAEPVRARGFCLFNNVAVAAAHARSALG 176
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNL 191
+RV IID+D HHGNGT D F+ DPD+ F H+ YPG+G ++EVG G GEG+T+N+
Sbjct: 177 CERVLIIDWDAHHGNGTQDIFWADPDVMFFDIHRAAPFYPGSGHLEEVGAGLGEGTTINV 236
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP G+GD A F +++ P A FKPD+ILVSAG+D H D +L + + L
Sbjct: 237 PLPAGAGDEAYLKAFRDILAPAAHWFKPDIILVSAGFDPHWHD--LALNVSYEGFGALTG 294
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
++QLA+ C R VF LEGGYNL SL+
Sbjct: 295 FLQQLAEQHCEGRLVFVLEGGYNLESLA 322
>gi|115523092|ref|YP_780003.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisA53]
gi|115517039|gb|ABJ05023.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisA53]
Length = 309
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 106/269 (39%), Positives = 149/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D IA H ++ L + A + G+I ++ T + T++ +L + G D+
Sbjct: 52 LDTIALCHTDHHIVELRQM---APENGLIFVDSD--TSMSPGTWEAALRSVGGATTATDA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V K F RPPGHHA PMGFC FGN AIAARYAQR +G+ R ++DFD
Sbjct: 107 VMTGKVTN----AFVSTRPPGHHAEIGKPMGFCFFGNAAIAARYAQRKYGIARAAVVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT + F+ DP + + STHQ +PGTG + E G D + +N PL G
Sbjct: 163 VHHGNGTQEIFWADPTVMYCSTHQMPLFPGTGAMSERGEHD---NIVNAPLQSEDGSDKF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R+ F ++I+P ++F P+LI++SAG+DAH DPLASL T + + + +A G
Sbjct: 220 RSAFEDLILPRLKQFAPELIVISAGFDAHCRDPLASLNLQTEDFAWVTRRLMDVADATAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SV +A +G
Sbjct: 280 GRIVSVLEGGYDLQGLRESVTAHVQALMG 308
>gi|320352964|ref|YP_004194303.1| histone deacetylase superfamily protein [Desulfobulbus propionicus
DSM 2032]
gi|320121466|gb|ADW17012.1| histone deacetylase superfamily [Desulfobulbus propionicus DSM
2032]
Length = 343
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 163/302 (53%), Gaps = 16/302 (5%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+L+ F P AS DI +VH+ Y+ L + ++ TY + +
Sbjct: 44 QLRTFLPREASSADIEAVHSAFYLEQLREHVNIDDPYSY-----DRDTYLMEQSLYTAAL 98
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG + L D + + GFALIRPPGHHA P MGFCVF NVAI A+Y +R +
Sbjct: 99 AAGGCLELADRILDG----EIDYGFALIRPPGHHAEPGRGMGFCVFNNVAITAQYLRRVY 154
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
GL+R+ I+DFDVHHGNGT FY+ +FF+S HQ+ +P +G E G G G T+NL
Sbjct: 155 GLRRILIVDFDVHHGNGTQTVFYETDQVFFVSIHQEKIFPFSGSARETGSDKGRGYTINL 214
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P+ D + V+ +++ P +ILVSAG+D H DP++ + +T Y +
Sbjct: 215 PVHPQFSDQEYLYLLSRVLGGVVEQYLPQIILVSAGFDGHCDDPISRVLLSTQWYATVTE 274
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSA 311
+K LA + C R +F LEGGYN +SL SV + + L S+ P +++ + +A
Sbjct: 275 LLKYLAHEACNDRLLFVLEGGYNPDSLQASVLVTVDSLLHPASR-----RPGVVHSQRAA 329
Query: 312 KV 313
K+
Sbjct: 330 KI 331
>gi|386811556|ref|ZP_10098781.1| histone deacetylase [planctomycete KSU-1]
gi|386403826|dbj|GAB61662.1| histone deacetylase [planctomycete KSU-1]
Length = 311
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 151/270 (55%), Gaps = 10/270 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS+++I +H Y+ ++ + Q T +A ++ ++ A GA +A +
Sbjct: 50 ASLEEIGLIHTENYIQAIKHIANTGGGQL------DSDTIISAASYDAAVHAVGAPLAAI 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D + + + F LIRPPGHHA P MGFC+F NVA+AA+Y Q + L+R+FIID
Sbjct: 104 DFIMKGEEKN----AFCLIRPPGHHATPARGMGFCLFNNVAVAAKYIQSKYKLERIFIID 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT DAF++DP I + S H+ YPG+G+ +E G GEG T+N+P+P
Sbjct: 160 WDVHHGNGTQDAFFNDPTILYFSMHRYPFYPGSGRKEESGWDKGEGFTINVPVPANIPSQ 219
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+F +VI A +F P+ I++SAG+D + DP+ L + +L + + A+
Sbjct: 220 RYIELFTDVIKQNADQFIPEFIIISAGFDTYKKDPIGGLNLDREDFRILTEIVIRTAQKY 279
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
C R V LEGGYN + L + +A L
Sbjct: 280 CNGRLVSCLEGGYNFSDLPLCIEAHLKALL 309
>gi|389697030|ref|ZP_10184672.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
gi|388585836|gb|EIM26131.1| deacetylase, histone deacetylase/acetoin utilization protein
[Microvirga sp. WSM3557]
Length = 315
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/283 (38%), Positives = 153/283 (54%), Gaps = 13/283 (4%)
Query: 15 LKNFSP-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
++ +P A ++ + H + Y+ L D + ++G++ I+ T + T++ +L A
Sbjct: 45 VRELAPMAEMESLTLAHPQDYIVRLR---DISPREGLVRIDED--TVMSPGTYEAALRGA 99
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G + VD V + + F +RPPGHHA MGFC F N AIAAR+AQ+ +G
Sbjct: 100 GGAVLAVDEVMSGRATN----AFVAMRPPGHHAERTRAMGFCFFNNAAIAARHAQKRYGA 155
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
+RV I D+DVHHGNGT D F+ D + + STH+ YPGTG + E G G+ +N PL
Sbjct: 156 ERVAIFDWDVHHGNGTQDIFWSDASVLYCSTHEAPLYPGTGALSETG---AHGTIVNAPL 212
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G G A R I+P F PDLI++SAG+DAH DPLASL + +
Sbjct: 213 NAGDGSEAFREAVETAILPRIHDFAPDLIVISAGFDAHWRDPLASLNLMESDFAWATQKL 272
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKA 296
LA+ CG R V LEGGY+L L+ S A A +G + A
Sbjct: 273 MALAERHCGQRIVSVLEGGYDLEGLARSTAFHLDALMGRETGA 315
>gi|148253967|ref|YP_001238552.1| deacetylase [Bradyrhizobium sp. BTAi1]
gi|146406140|gb|ABQ34646.1| putative deacetylase [Bradyrhizobium sp. BTAi1]
Length = 309
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/263 (41%), Positives = 144/263 (54%), Gaps = 12/263 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
H YV+ L + A GII ++G T + T++ + G +A +SV + ++
Sbjct: 58 CHNEHYVTELRQM---APTSGIIYLDGD--TSMSPGTWEAVMRGVGGAVAATESVMSGRH 112
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
R F +RPPGHHA PMGFC F NVAIAARYAQR G++R IIDFDVHHGNG
Sbjct: 113 RN----AFVAVRPPGHHAEIAKPMGFCFFDNVAIAARYAQRTFGIERAAIIDFDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T D F+ D + + STHQ +PGTG E G D + +N PL G R+ F
Sbjct: 169 TQDIFWADKSVMYCSTHQMPLFPGTGARGERGEHD---TIVNAPLASDDGSLEFRSAFEN 225
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
+I+P +F P+L+++SAG+DAH DPLASL + + + LA G R V
Sbjct: 226 LILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMDLADKCAGGRVVSV 285
Query: 269 LEGGYNLNSLSYSVADSFRAFLG 291
LEGGY+L L SV+ A G
Sbjct: 286 LEGGYDLQGLKESVSAHVAALTG 308
>gi|150395720|ref|YP_001326187.1| histone deacetylase superfamily protein [Sinorhizobium medicae
WSM419]
gi|150027235|gb|ABR59352.1| histone deacetylase superfamily [Sinorhizobium medicae WSM419]
Length = 309
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 144/258 (55%), Gaps = 12/258 (4%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D + HA ++ G+++ + + I +E TYAT + +L G +A VD+V
Sbjct: 53 DLVLLAHAEEHLRGVKRGI---PDEDINQLEAD--TYATPQSLVAALTGIGGAVAAVDAV 107
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
K D F RPPGHHA MGFC F NVAIAARYAQRAHG +RV I+D+DV
Sbjct: 108 --FKGEADN--AFIAARPPGHHAEKNKVMGFCFFNNVAIAARYAQRAHGAERVAIVDWDV 163
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT D F+DDP + F STHQ YPGTG DE G + +N PL SG R
Sbjct: 164 HHGNGTQDIFWDDPSVLFCSTHQIPLYPGTGAKDETGV---RNNIVNAPLSPNSGSEHFR 220
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
F ++P + F+PDL+L+SAG+DAH DPLA + + + +A G+
Sbjct: 221 DAFRTRVLPALENFRPDLLLISAGFDAHHRDPLAQINLVGEDFDWATGRLIDIAGRSAGN 280
Query: 264 RCVFFLEGGYNLNSLSYS 281
R V LEGGY+L L+ S
Sbjct: 281 RIVSLLEGGYDLQGLAES 298
>gi|365881077|ref|ZP_09420408.1| putative deacetylase [Bradyrhizobium sp. ORS 375]
gi|365290785|emb|CCD92939.1| putative deacetylase [Bradyrhizobium sp. ORS 375]
Length = 309
Score = 197 bits (500), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 144/262 (54%), Gaps = 12/262 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H YV+ L + A GII ++G T + T++ + G +A +SV + ++R
Sbjct: 59 HNEHYVTELRQM---APTSGIIYLDGD--TSMSPGTWEAVMRGVGGAVAATESVMSGRHR 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F RPPGHHA PMGFC F NVAIAARYAQR G++R IIDFDVHHGNGT
Sbjct: 114 N----AFVATRPPGHHAEIAKPMGFCFFDNVAIAARYAQRTFGIERAAIIDFDVHHGNGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+ D + + STHQ +PGTG E G D + +N PL G R+ F +
Sbjct: 170 QDIFWADKSVMYCSTHQMPLFPGTGARGERGEHD---TIVNAPLASEDGSLEFRSAFENL 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P +F P+L+++SAG+DAH DPLASL + + + +LA G R V L
Sbjct: 227 ILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMELADKTAGGRVVSVL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLG 291
EGGY+L L SV+ A G
Sbjct: 287 EGGYDLQGLKESVSAHVAALTG 308
>gi|359690295|ref|ZP_09260296.1| acetoin-histone deacetylase [Leptospira licerasiae serovar Varillal
str. MMD0835]
gi|418750553|ref|ZP_13306839.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
gi|418758738|ref|ZP_13314920.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114640|gb|EIE00903.1| histone deacetylase family protein [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404273156|gb|EJZ40476.1| histone deacetylase family protein [Leptospira licerasiae str.
MMD4847]
Length = 308
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 99/226 (43%), Positives = 140/226 (61%), Gaps = 6/226 (2%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
G T + ++F +L AAG+G+ LV+ + +++ G AL+RPPGHHA MGFC+
Sbjct: 80 GDTPYSESSFDAALLAAGSGVDLVNKIRSNEIES----GIALVRPPGHHAETGRSMGFCL 135
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
N+AI A Y + G+++V+I+D+DVHHGNGT + FYD +FF S HQ YPGTG +
Sbjct: 136 LNNIAITANYL-LSQGIEKVYILDWDVHHGNGTQEIFYDSDKVFFTSLHQYPYYPGTGSV 194
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
E G G G+ TLN+PL GSGD F EV+VP F+P+ +L+SAG+D H DPL
Sbjct: 195 HEKGEGKGQNFTLNIPLSMGSGDKEYLHYFQEVVVPSVLEFQPEYVLISAGFDGHKRDPL 254
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
A + +T + I K + GS+ + FLEGGY+L +L+ SV
Sbjct: 255 AGMNLSTNAFAEFTRLILSATKQI-GSKTISFLEGGYDLGALAESV 299
>gi|284043321|ref|YP_003393661.1| histone deacetylase [Conexibacter woesei DSM 14684]
gi|283947542|gb|ADB50286.1| Histone deacetylase [Conexibacter woesei DSM 14684]
Length = 341
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 163/282 (57%), Gaps = 23/282 (8%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEK---AMDRASQQGIILIEGSG 57
+E E RG +E +A+VH Y+ +++ A A +++EGS
Sbjct: 30 IEQELERRGWLGLERLEAPIVQESTLAAVHPVRYIRAIDELCAAGGGAIDADTVVVEGS- 88
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
++ +L AAG + LVD + R GF+ +RPPGHHA MGFC+F
Sbjct: 89 --------YEAALRAAGGAVRLVDLLLGGGAR----TGFSALRPPGHHAEAARAMGFCLF 136
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKID 177
GNVA+AAR+A AHG +RV ++D+DVHHGNGTND F+ ++ F+S H+ YPGTG +
Sbjct: 137 GNVAVAARHALDAHGAERVLVLDWDVHHGNGTNDIFHATDEVLFVSLHESPLYPGTGPVG 196
Query: 178 EVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
+VG G G G T+N+P+ G+GD ++ V+VP A+ ++P LIL+SAG+DAH DPLA
Sbjct: 197 DVGSGRGTGYTVNVPVAAGTGDATYASLLEHVVVPLARAYEPRLILLSAGFDAHRDDPLA 256
Query: 238 SLQFTTGTYYMLAANIKQLAKDL---CGSRCVFFLEGGYNLN 276
++ + G + + I++LA +L G LEGGY+L
Sbjct: 257 GVRLSEGGFAAMTGTIRRLAAELEVPVGG----VLEGGYDLG 294
>gi|420239566|ref|ZP_14743875.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
gi|398079774|gb|EJL70614.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
Length = 372
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 153/264 (57%), Gaps = 15/264 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAM--DRASQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
P + +D+A H R Y+S + KAM DR + G G +F+ + +AG
Sbjct: 69 PVTEEDLALFHTRDYISRI-KAMSGDRGGDASYLTPFGRG-------SFEIACLSAGGTF 120
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
A+VD+V + + G+AL+RPPGHHA +GFC+FGNV +A A++ HG+ R+
Sbjct: 121 AMVDAVLSGRVSN----GYALVRPPGHHAEHDRGLGFCLFGNVPVAILKARKVHGMGRIA 176
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGG 196
ID+DVHHGNGT AFY DPD+ +S HQ+ +PG G E G G GEG LN+PLP G
Sbjct: 177 TIDWDVHHGNGTQSAFYADPDVLTISIHQERLFPGDRGDRSERGEGPGEGFNLNIPLPPG 236
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
SG A F + ++P R+KP+LI+VS+G+DA +DP + + +Y +A + Q
Sbjct: 237 SGHGAYMAAFEQAVLPALARYKPELIVVSSGFDASAIDPFGRMMLHSDSYREMARLLMQA 296
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSY 280
A LCG R EGGY+ + + Y
Sbjct: 297 ADTLCGGRLAMSHEGGYSASYVPY 320
>gi|260431856|ref|ZP_05785827.1| histone deacetylase family protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415684|gb|EEX08943.1| histone deacetylase family protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 308
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 109/278 (39%), Positives = 162/278 (58%), Gaps = 16/278 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ +H +Y+ + D +G I+G T+ + + + AAGA + V
Sbjct: 47 AADDDLLRIHPESYIREIR---DSRPAEGFRQIDGD--TFMSPGSVDAAYRAAGAVVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + P F IRPPGHHA + MGFC+FGN A+AA++A HGL RV ++D
Sbjct: 102 DMVLGG----EAPNAFCAIRPPGHHAERETAMGFCLFGNAALAAKHALDHHGLDRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+ +++ Q +PG+G+ DE G D + +N+PL G+G
Sbjct: 158 FDVHHGNGTQDLLWDEARALVVTSQQMPLWPGSGRPDETGAHD---TIVNIPLAPGAGGA 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
MR + P + FKP+LI++SAG+DAH DPLA+L ++T + + A + ++A +L
Sbjct: 215 EMRAAYEAQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWSTDDFAWITAQLCRIADEL 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
CG R V LEGGY+LN+L A + RA + E KA+
Sbjct: 275 CGGRIVSTLEGGYDLNAL----AKATRAHVEELMKAAR 308
>gi|359786372|ref|ZP_09289507.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
gi|359296222|gb|EHK60475.1| histone deacetylase superfamily protein [Halomonas sp. GFAJ-1]
Length = 362
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/268 (42%), Positives = 158/268 (58%), Gaps = 13/268 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++++ A+ + +A VH +Y+S D S +G T + + + A
Sbjct: 67 LKIEGGKAATAEQLARVHTTSYLS------DIFSLRGKNAWLDVDTTAVSPGSVDAAEVA 120
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA V++V + + FALIRPPGHHA P GFC+F NVA+AA +A+ A G
Sbjct: 121 AGTAIAAVEAVMEKRTQS----AFALIRPPGHHAEPVRARGFCLFNNVAVAAAHARSALG 176
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNL 191
+RV IID+D HHGNGT D F+ DPD+ F H+ YPG+G ++EVG G GEG+T+N+
Sbjct: 177 CERVLIIDWDAHHGNGTQDIFWADPDVMFFDIHRAAPFYPGSGHLEEVGAGLGEGTTINV 236
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP G+GD A F +++ P A FKPD+ILVSAG+D H D +L + + L
Sbjct: 237 PLPAGAGDEAYLKAFRDILAPAAAWFKPDIILVSAGFDPHWHD--LALNVSYEGFGALTG 294
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
++QLA C R VF LEGGYNL SL+
Sbjct: 295 ALQQLADQHCEGRLVFVLEGGYNLESLA 322
>gi|403222692|dbj|BAM40823.1| uncharacterized protein TOT_030000085 [Theileria orientalis strain
Shintoku]
Length = 840
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 122/193 (63%), Gaps = 5/193 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA++RPPGHHA P MGFC+F NVAIAAR+ QR HGL+RV I+D+DVHHGNGT D FY
Sbjct: 201 GFAIVRPPGHHATPDKMMGFCIFNNVAIAARHLQRKHGLRRVAIVDWDVHHGNGTQDIFY 260
Query: 155 DDPDIFFLSTHQDGS-----YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
DD + F+S H+ G+ YP TG DE+G G G +N+PL G ++ + F+ V
Sbjct: 261 DDDSVCFISLHRYGTEEESFYPYTGYCDEIGVGKGCKYNVNIPLEKGFTNSDLVHCFNRV 320
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
+VP QRFKP+ I+VSAG+DA D L Y A + +LA+ C R + L
Sbjct: 321 VVPVLQRFKPEFIIVSAGFDAAKDDLLGGCNLDKEGYSWATAQLCELAEKHCKGRLLLSL 380
Query: 270 EGGYNLNSLSYSV 282
EGGY L+ LS V
Sbjct: 381 EGGYTLHRLSEDV 393
>gi|225579832|gb|ACN94107.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A + + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGRAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|152993099|ref|YP_001358820.1| acetoin utilization protein [Sulfurovum sp. NBC37-1]
gi|151424960|dbj|BAF72463.1| acetoin utilization protein [Sulfurovum sp. NBC37-1]
Length = 307
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 158/281 (56%), Gaps = 24/281 (8%)
Query: 15 LKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
L + SP SV + + VH ++ + +A SQQ + T + +++ + A
Sbjct: 41 LIDVSPISVSEKVLELVHTPEHIETVREA----SQQNRSI---DSDTICSEHSYEAARKA 93
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GAGI VD + + + F +RPPGHHA P+ MGFC+F N+AI ARYAQ+ G
Sbjct: 94 VGAGIVAVDGI----KKGEFERAFCAVRPPGHHARPEHAMGFCLFNNIAITARYAQQ-QG 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
K+V IIDFDVHHGNGT D FYDD +F+ S+HQ +YPGTG E G G GEG T N
Sbjct: 149 YKKVMIIDFDVHHGNGTQDTFYDDDSVFYFSSHQAFAYPGTGMEKERGAGKGEGYTANFL 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
+ SGD + ++ + P F+PD+ILVSAGYD H DPLA L TT
Sbjct: 209 VMPDSGDEELLDIYENDLPPYVSAFQPDIILVSAGYDLHESDPLAQLNVTTD-------G 261
Query: 253 IKQLAKDLCGSRCV---FFLEGGYNLNSLSYSVADSFRAFL 290
I+++ + + S V FFLEGGY++N+L +V + L
Sbjct: 262 IQKIVRLILKSADVPYLFFLEGGYDVNALGRNVKVTLEEML 302
>gi|225579760|gb|ACN94043.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579913|gb|ACN94179.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579958|gb|ACN94219.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|189023666|ref|YP_001934434.1| histone deacetylase family [Brucella abortus S19]
gi|260545833|ref|ZP_05821574.1| histone deacetylase family protein [Brucella abortus NCTC 8038]
gi|260761252|ref|ZP_05873595.1| histone deacetylase superfamily protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260883232|ref|ZP_05894846.1| histone deacetylase superfamily protein [Brucella abortus bv. 9
str. C68]
gi|423167415|ref|ZP_17154118.1| hypothetical protein M17_01105 [Brucella abortus bv. 1 str. NI435a]
gi|423170209|ref|ZP_17156884.1| hypothetical protein M19_00742 [Brucella abortus bv. 1 str. NI474]
gi|423173711|ref|ZP_17160382.1| hypothetical protein M1A_01109 [Brucella abortus bv. 1 str. NI486]
gi|423177004|ref|ZP_17163650.1| hypothetical protein M1E_01246 [Brucella abortus bv. 1 str. NI488]
gi|423179642|ref|ZP_17166283.1| hypothetical protein M1G_00742 [Brucella abortus bv. 1 str. NI010]
gi|423182772|ref|ZP_17169409.1| hypothetical protein M1I_00741 [Brucella abortus bv. 1 str. NI016]
gi|423186285|ref|ZP_17172899.1| hypothetical protein M1K_01103 [Brucella abortus bv. 1 str. NI021]
gi|189019238|gb|ACD71960.1| Histone deacetylase family [Brucella abortus S19]
gi|260097240|gb|EEW81115.1| histone deacetylase family protein [Brucella abortus NCTC 8038]
gi|260671684|gb|EEX58505.1| histone deacetylase superfamily protein [Brucella abortus bv. 2
str. 86/8/59]
gi|260872760|gb|EEX79829.1| histone deacetylase superfamily protein [Brucella abortus bv. 9
str. C68]
gi|374540849|gb|EHR12348.1| hypothetical protein M17_01105 [Brucella abortus bv. 1 str. NI435a]
gi|374541457|gb|EHR12952.1| hypothetical protein M1A_01109 [Brucella abortus bv. 1 str. NI486]
gi|374542445|gb|EHR13934.1| hypothetical protein M19_00742 [Brucella abortus bv. 1 str. NI474]
gi|374551161|gb|EHR22596.1| hypothetical protein M1G_00742 [Brucella abortus bv. 1 str. NI010]
gi|374551618|gb|EHR23052.1| hypothetical protein M1I_00741 [Brucella abortus bv. 1 str. NI016]
gi|374552754|gb|EHR24177.1| hypothetical protein M1E_01246 [Brucella abortus bv. 1 str. NI488]
gi|374557964|gb|EHR29358.1| hypothetical protein M1K_01103 [Brucella abortus bv. 1 str. NI021]
Length = 316
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 139/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDGDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|108760712|ref|YP_634045.1| histone deacetylase [Myxococcus xanthus DK 1622]
gi|108464592|gb|ABF89777.1| histone deacetylase family protein [Myxococcus xanthus DK 1622]
Length = 347
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 134/211 (63%), Gaps = 5/211 (2%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAGA + V++V + R GFAL+RPPGHHA P MGFC++ N AIAA A R
Sbjct: 101 AAGASVQAVEAVMKGEARN----GFALVRPPGHHAEPDKAMGFCLYNNAAIAAE-AGRKL 155
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
G +RV ++D+DVHHGNGT AF+ D+ + S HQ +PGTG EVG G GEG T+N+
Sbjct: 156 GAERVLVLDWDVHHGNGTQAAFWSRRDVMYQSVHQFPYFPGTGAAPEVGVGAGEGYTINV 215
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
LPGG+ D +F E+++P A+ ++P LILVSAG+D+H DP+ + + + + +
Sbjct: 216 GLPGGNSDADYGMIFEELLLPVAEAYRPQLILVSAGFDSHQHDPIGGMDVSERGFAAMCS 275
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+K LA +C R V LEGGY+L LS SV
Sbjct: 276 AMKSLADSVCQGRLVLLLEGGYSLEGLSQSV 306
>gi|225579828|gb|ACN94103.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A + + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGRAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579814|gb|ACN94091.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579823|gb|ACN94099.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A + + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGRAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|225579758|gb|ACN94041.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579909|gb|ACN94175.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579954|gb|ACN94215.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579940|gb|ACN94203.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H Q GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFQHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|24642146|ref|NP_727843.1| HDAC6, isoform C [Drosophila melanogaster]
gi|22833161|gb|AAN09662.1| HDAC6, isoform C [Drosophila melanogaster]
gi|225579769|gb|ACN94051.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579778|gb|ACN94059.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579796|gb|ACN94075.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579805|gb|ACN94083.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579841|gb|ACN94115.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579859|gb|ACN94131.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579868|gb|ACN94139.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579877|gb|ACN94147.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579886|gb|ACN94155.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579895|gb|ACN94163.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579904|gb|ACN94171.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579922|gb|ACN94187.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579931|gb|ACN94195.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579949|gb|ACN94211.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
gi|225579967|gb|ACN94227.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|384875349|gb|AFI26268.1| HDAC6 [Drosophila melanogaster]
Length = 1128
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579850|gb|ACN94123.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+RV IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRVLIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|442616414|ref|NP_001259569.1| HDAC6, isoform G [Drosophila melanogaster]
gi|440216793|gb|AGB95411.1| HDAC6, isoform G [Drosophila melanogaster]
Length = 1179
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 174/319 (54%), Gaps = 23/319 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVK 321
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQ 881
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|384875350|gb|AFI26269.1| HDAC6 [Drosophila melanogaster]
Length = 1138
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|225579810|gb|ACN94087.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579819|gb|ACN94095.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A + + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGRAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579759|gb|ACN94042.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579912|gb|ACN94178.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579957|gb|ACN94218.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|407799463|ref|ZP_11146356.1| histone deacetylase superfamily protein [Oceaniovalibus
guishaninsula JLT2003]
gi|407058648|gb|EKE44591.1| histone deacetylase superfamily protein [Oceaniovalibus
guishaninsula JLT2003]
Length = 309
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/273 (39%), Positives = 153/273 (56%), Gaps = 16/273 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A+ DI H Y+ + A+ + +E T + +F ++ A
Sbjct: 40 LERREAPVAAEGDITLCHPTRYLDRVRNAVPTEGR-----VELDADTTLSPGSFDAAMRA 94
Query: 73 AGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AG +A +D+V A++N F RPPGHHA + MGFC+FGNVAI A +A
Sbjct: 95 AGGMVAAIDAVLDGAARN------AFVGCRPPGHHAEVETAMGFCLFGNVAIGAMHALER 148
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
GL RV I+DFDVHHGNGT D +D+ + F+S+HQ YPGTG + E G +N
Sbjct: 149 RGLSRVAIVDFDVHHGNGTQDLLWDEARVLFVSSHQMPLYPGTGAMTERG---AHRQVMN 205
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
LPLP GS MR ++ ++P ++ P+L+L+SAG+DAH DPLA L++ T Y L
Sbjct: 206 LPLPPGSDGVLMREIYETRVLPALRQNAPELLLISAGFDAHAADPLAQLEWQTEDYTWLT 265
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ +A +CG R V LEGGY+L +L SVA
Sbjct: 266 EQLCDVADAVCGGRVVSTLEGGYDLAALEASVA 298
>gi|225579831|gb|ACN94106.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A + + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGRAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|255982634|gb|ACU45748.1| AT13940p [Drosophila melanogaster]
Length = 1022
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 174/320 (54%), Gaps = 23/320 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKH 322
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQ 889
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 164/301 (54%), Gaps = 17/301 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGGMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 P 293
P
Sbjct: 434 P 434
>gi|114765813|ref|ZP_01444906.1| histone deacetylase family protein [Pelagibaca bermudensis
HTCC2601]
gi|114541812|gb|EAU44849.1| histone deacetylase family protein [Roseovarius sp. HTCC2601]
Length = 308
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 156/262 (59%), Gaps = 12/262 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PAS +D+A VH AY++ + A +G I ++G T+ + + + AGA +
Sbjct: 46 PASDEDLARVHPAAYIARIAGA---EPTEGEIALDGD--TWMSPGSMMAARRGAGAAMRA 100
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD+V + + R F RPPGHHA + PMGFC+FGN A+AA++A HGL+RV ++
Sbjct: 101 VDAVMSREARN----VFCATRPPGHHAERETPMGFCLFGNAALAAKHALDHHGLERVAVV 156
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT D +D+P F+S+ Q +PGTG E G G + LNLPL GSG
Sbjct: 157 DFDVHHGNGTQDLLWDEPRALFISSQQYPLWPGTGAATERG---GHDNVLNLPLAPGSGG 213
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
T M + E +P + F+PDLI++SAG+DAH DPLA L + + L + ++A D
Sbjct: 214 TEMYRAYTEQALPRLREFRPDLIVISAGFDAHHEDPLAQLNWKDQDFAWLTRELCRIATD 273
Query: 260 LCGSRCVFFLEGGYNLNSLSYS 281
C R V LEGGY+L +L+ S
Sbjct: 274 QCEGRVVSVLEGGYDLAALAGS 295
>gi|451980726|ref|ZP_21929112.1| putative Deacetylase, histone deacetylase family [Nitrospina
gracilis 3/211]
gi|451762062|emb|CCQ90351.1| putative Deacetylase, histone deacetylase family [Nitrospina
gracilis 3/211]
Length = 311
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 159/265 (60%), Gaps = 14/265 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ ++IA H Y+ + RA + G+ ++ T + ++ +L AAGAG+
Sbjct: 50 PATAEEIALNHPEKYMDSVA----RACESGMSRLDMD--TAISTKSYDSALLAAGAGLTA 103
Query: 80 VDSVA--ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
VD+V A N F +RPPGHHA MGFC+F NVA+AARYA L RVF
Sbjct: 104 VDAVVDGACDNV------FCAVRPPGHHAEETRSMGFCLFNNVAVAARYALAKKDLNRVF 157
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
I D+DVHHGNGT +FY DP+I++ STHQ YPGTG DE G GDG G+TLN P+ S
Sbjct: 158 IFDWDVHHGNGTQHSFYADPNIYYSSTHQFPFYPGTGDKDETGTGDGLGTTLNFPMRAFS 217
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D +V + +VP RFKPDLI++S+G+DAH DPLA++ TT + + I+ A
Sbjct: 218 NDADYISVVKDKLVPEMFRFKPDLIIISSGFDAHEDDPLANVSLTTECFGEMTRLIRGAA 277
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSV 282
++C R + LEGGYN +L+ SV
Sbjct: 278 DEICRGRLISMLEGGYNYEALADSV 302
>gi|56695167|ref|YP_165514.1| histone deacetylase [Ruegeria pomeroyi DSS-3]
gi|56676904|gb|AAV93570.1| histone deacetylase family protein [Ruegeria pomeroyi DSS-3]
Length = 308
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 167/289 (57%), Gaps = 18/289 (6%)
Query: 11 EIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
E ++L+ + A+ DD+ +H YV+ + D +G I+G T+ + +
Sbjct: 35 EPLDLRRVTAPLAAEDDLLRIHPAGYVADIR---DARPDEGFAQIDGD--TFLSPGSVDA 89
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAGA + VD V + + F IRPPGHHA + MGFC+FGN A+AA++A
Sbjct: 90 AFRAAGAVVRAVDMVLGGEAQN----AFCAIRPPGHHAERETAMGFCLFGNAALAAKHAL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
HGL+RV ++DFDVHHGNGT D +D+ +++ Q +PG+G+ DE G G
Sbjct: 146 DHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQMPLWPGSGRPDEDG---AHGQI 202
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PL G+G MR + P + FKP+LI++SAG+DAH DPLA+L ++T +
Sbjct: 203 VNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIIISAGFDAHQDDPLANLNWSTADFAW 262
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
L A + LA++LC R V LEGGY+LN+L+ + RA + E KA+
Sbjct: 263 LTAELCALAQELCQGRIVSTLEGGYDLNALAAAT----RAHVQELIKAA 307
>gi|384875348|gb|AFI26267.1| HDAC6 [Drosophila melanogaster]
Length = 1135
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|386764455|ref|NP_001245680.1| HDAC6, isoform E [Drosophila melanogaster]
gi|383293406|gb|AFH07394.1| HDAC6, isoform E [Drosophila melanogaster]
Length = 1108
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 555 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 611
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 612 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 667
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 668 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 727
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 728 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 787
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 788 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 843
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 844 A-LQKPPTVAFQSCVESLQQC 863
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 116 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 174
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 175 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 230
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 231 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 290
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 291 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 350
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 351 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 406
Query: 293 PS 294
P
Sbjct: 407 PC 408
>gi|24642142|ref|NP_573017.2| HDAC6, isoform A [Drosophila melanogaster]
gi|22833159|gb|AAF48443.2| HDAC6, isoform A [Drosophila melanogaster]
gi|28557633|gb|AAO45222.1| LD43531p [Drosophila melanogaster]
gi|220947430|gb|ACL86258.1| HDAC6-PA [synthetic construct]
gi|225579765|gb|ACN94047.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579774|gb|ACN94055.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579792|gb|ACN94071.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579801|gb|ACN94079.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579837|gb|ACN94111.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579855|gb|ACN94127.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579864|gb|ACN94135.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579873|gb|ACN94143.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579882|gb|ACN94151.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579891|gb|ACN94159.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579900|gb|ACN94167.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579918|gb|ACN94183.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579927|gb|ACN94191.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579947|gb|ACN94209.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
gi|225579963|gb|ACN94223.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579846|gb|ACN94119.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+RV IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRVLIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579936|gb|ACN94199.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H Q GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFQHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|225579813|gb|ACN94090.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579822|gb|ACN94098.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A + + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGRAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|386764457|ref|NP_001245681.1| HDAC6, isoform F [Drosophila melanogaster]
gi|383293407|gb|AFH07395.1| HDAC6, isoform F [Drosophila melanogaster]
Length = 1022
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/320 (37%), Positives = 174/320 (54%), Gaps = 23/320 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKH 322
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQ 889
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 164/301 (54%), Gaps = 17/301 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 P 293
P
Sbjct: 434 P 434
>gi|281360899|ref|NP_001162760.1| HDAC6, isoform D [Drosophila melanogaster]
gi|4455131|gb|AAD21090.1| histone deacetylase HDA2 [Drosophila melanogaster]
gi|272506112|gb|ACZ95295.1| HDAC6, isoform D [Drosophila melanogaster]
gi|384875351|gb|AFI26270.1| HDAC6 [Drosophila melanogaster]
Length = 883
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/319 (37%), Positives = 174/319 (54%), Gaps = 23/319 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 500 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 556
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 557 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 612
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 613 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 672
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 673 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 732
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 733 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 788
Query: 303 AILYEEPSAKVKQAIERVK 321
A L + P+ + +E ++
Sbjct: 789 A-LQKPPTVAFQSCVESLQ 806
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 61 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 119
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 120 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 175
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 176 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 235
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 236 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 295
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 296 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 351
Query: 293 PS 294
P
Sbjct: 352 PC 353
>gi|225579849|gb|ACN94122.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+RV IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRVLIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|24642144|ref|NP_727842.1| HDAC6, isoform B [Drosophila melanogaster]
gi|22833160|gb|AAN09661.1| HDAC6, isoform B [Drosophila melanogaster]
gi|225579768|gb|ACN94050.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579777|gb|ACN94058.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579795|gb|ACN94074.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579804|gb|ACN94082.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579840|gb|ACN94114.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579858|gb|ACN94130.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579867|gb|ACN94138.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579876|gb|ACN94146.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579885|gb|ACN94154.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579894|gb|ACN94162.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579903|gb|ACN94170.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579921|gb|ACN94186.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579930|gb|ACN94194.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579948|gb|ACN94210.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
gi|225579966|gb|ACN94226.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|225579939|gb|ACN94202.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H Q GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFQHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|83593948|ref|YP_427700.1| histone deacetylase superfamily protein [Rhodospirillum rubrum ATCC
11170]
gi|386350700|ref|YP_006048948.1| histone deacetylase superfamily protein [Rhodospirillum rubrum F11]
gi|83576862|gb|ABC23413.1| Histone deacetylase superfamily [Rhodospirillum rubrum ATCC 11170]
gi|346719136|gb|AEO49151.1| histone deacetylase superfamily protein [Rhodospirillum rubrum F11]
Length = 309
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/256 (39%), Positives = 147/256 (57%), Gaps = 9/256 (3%)
Query: 35 VSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPL 94
+S +E +D ++G I+G T + + + +L AAG + VD+V R
Sbjct: 61 LSHVEFLLDHVPREGTYHIDGD--TVMSPDSGEAALRAAGGMVQAVDAVMDKSVRN---- 114
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F +RPPGHHA MGFC+F N AI A +A+ G +RV +ID+DVHHGNGT F+
Sbjct: 115 AFVAVRPPGHHAELATAMGFCLFNNAAIGAYHARARWGAERVAVIDWDVHHGNGTQHIFW 174
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DDP +F+ STH+ S+P TG +DE G G G+ +N PL G+ R F E I P
Sbjct: 175 DDPAMFYASTHEAHSFPNTGFVDETG---GHGNIVNCPLRSGADGLRFREAFTERITPAL 231
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F PDLI++SAG+DAHV+DP+A+L + + +A D+C SR V LEGGY+
Sbjct: 232 RAFAPDLIIISAGFDAHVMDPMANLNLKVADFVWATEQVLDVANDVCDSRVVSVLEGGYD 291
Query: 275 LNSLSYSVADSFRAFL 290
L +L+ V+ + +
Sbjct: 292 LTALASCVSAHVKTLM 307
>gi|225579783|gb|ACN94063.1| histone deacetylase 6 isoform A [Drosophila melanogaster]
Length = 1128
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 575 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGRELKE---LHDAAGIYNSVYLHPRTFDC 631
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 632 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 687
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 688 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 747
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 748 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 807
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 808 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 863
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 864 A-LQKPPTVAFQSCVESLQQC 883
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 136 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 194
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 195 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 250
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 251 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 310
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 311 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 370
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 371 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 426
Query: 293 PS 294
P
Sbjct: 427 PC 428
>gi|91978762|ref|YP_571421.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisB5]
gi|91685218|gb|ABE41520.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisB5]
Length = 309
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/270 (40%), Positives = 148/270 (54%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S++ IA H ++ + + GI+ ++G T + TF+ +L G ++ VD
Sbjct: 51 SLEHIALCHTDHHIVEMRH---MSPSTGIVYVDGD--TSMSPGTFEAALRGVGGAVSAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V + F RPPGHHA PMGFC FGN AIAARYAQR +G++R ++DF
Sbjct: 106 AVM----KGSAANAFVATRPPGHHAEVTKPMGFCFFGNAAIAARYAQRKYGIERAAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PGTG E G D + +N PL G
Sbjct: 162 DVHHGNGTQDIFWGDRTVMYCSTHQMPLFPGTGSAGERGEHD---NIVNAPLASEDGGKE 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F I+P +RF P+LI++SAG+DAH DPLASL + + + ++A
Sbjct: 219 FRFAFETAILPQLKRFAPELIVISAGFDAHYRDPLASLNLHAEDFAWVTQQLMEVADQTA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L LS SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLQGLSESVAAHVGALMG 308
>gi|225579787|gb|ACN94067.1| histone deacetylase 6 isoform C [Drosophila melanogaster]
Length = 1138
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 585 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGRELKE---LHDAAGIYNSVYLHPRTFDC 641
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 642 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 697
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 698 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 757
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 758 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 817
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 818 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 873
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 874 A-LQKPPTVAFQSCVESLQQC 893
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 146 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 204
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 205 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 260
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 261 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 320
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 321 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 380
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 381 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 436
Query: 293 PS 294
P
Sbjct: 437 PC 438
>gi|225579786|gb|ACN94066.1| histone deacetylase 6 isoform B [Drosophila melanogaster]
Length = 1135
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/321 (37%), Positives = 174/321 (54%), Gaps = 23/321 (7%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQE 68
++K SP A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 582 QMKQLSPRAATTDEVCLAHTRAHVNTVRRLLGRELKE---LHDAAGIYNSVYLHPRTFDC 638
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAG + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 639 ATLAAGLVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQYAI 694
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGD 183
R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+G
Sbjct: 695 RDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGA 754
Query: 184 GEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 755 GRGFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVT 814
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 815 AEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLGAT 870
Query: 303 AILYEEPSAKVKQAIERVKHI 323
A L + P+ + +E ++
Sbjct: 871 A-LQKPPTVAFQSCVESLQQC 890
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L E + R ++ L
Sbjct: 143 LERCRELNLTERCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDS 201
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F
Sbjct: 202 IYIHPSTFELSLLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFN 257
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+A ++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 258 NVALATQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 317
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 318 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 377
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 378 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 433
Query: 293 PS 294
P
Sbjct: 434 PC 435
>gi|376273828|ref|YP_005152406.1| histone deacetylase [Brucella abortus A13334]
gi|363401434|gb|AEW18404.1| histone deacetylase [Brucella abortus A13334]
Length = 322
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/247 (43%), Positives = 139/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 79 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 130
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D DVHHGNGT D F DD
Sbjct: 131 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDGDVHHGNGTQDIFKDD 190
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 191 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 246
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 247 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 306
Query: 277 SLSYSVA 283
LS S +
Sbjct: 307 GLSQSAS 313
>gi|51246214|ref|YP_066098.1| hypothetical protein DP2362 [Desulfotalea psychrophila LSv54]
gi|50877251|emb|CAG37091.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 341
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 154/284 (54%), Gaps = 11/284 (3%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+L+ +P A+ + I VH+ Y+S + + +++ TY + +
Sbjct: 42 DLRIITPHEANTETIEKVHSNFYLSQIREHALKSNP-----FSYDQDTYLMQQSLATAQL 96
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG + + D + + GFALIRPPGHHA P MGFC+ N+AI A+Y Q +
Sbjct: 97 AAGGCLEIADQIMNG----EIDHGFALIRPPGHHAEPGRGMGFCILNNIAITAKYLQTHY 152
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
L R+ IIDFDVHHGNGT + FYD + F+S HQ +P +G +E+G G G +N+
Sbjct: 153 NLSRILIIDFDVHHGNGTQEVFYDTNQVLFVSIHQKNLFPFSGAPEEIGNEQGRGYNINI 212
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P+ GD + + + A +F P +ILVSAGYD HV + +++ +T Y+
Sbjct: 213 PVHSQFGDAEYTYLLGKTLQGLAVQFMPQIILVSAGYDGHVEESISATTLSTQWYHTATT 272
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
+KQ AKD+C SR +F LEGGYN SL SV + + L +K
Sbjct: 273 MLKQAAKDICDSRLLFVLEGGYNPISLEKSVLKTIDSMLEPETK 316
>gi|316932494|ref|YP_004107476.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
DX-1]
gi|315600208|gb|ADU42743.1| histone deacetylase superfamily [Rhodopseudomonas palustris DX-1]
Length = 309
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 149/270 (55%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S++ IA H ++ L + GI+ ++G T + TF+ +L G +A VD
Sbjct: 51 SLEHIALCHTDHHIVELRHM---SPSTGIVYVDGD--TSMSPGTFEAALRGVGGSVAAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V + F RPPGHHA PMGFC FGN AIAARYAQR +G++R ++DF
Sbjct: 106 AVM----KGTAANAFVATRPPGHHAEITKPMGFCFFGNAAIAARYAQRQYGIERAAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PGTG E G D + +N PL G T
Sbjct: 162 DVHHGNGTQDIFWGDRTVMYCSTHQMPLFPGTGSQGERGEHD---NIVNAPLASEDGGTE 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F ++I+P + F P+LI++SAG+DAH DPLASL + + + ++A
Sbjct: 219 FRFAFDQLILPQLKHFSPELIVISAGFDAHYRDPLASLNLRAEDFAWVTERLMEVADQTA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L L SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLQGLGESVAAHVGALMG 308
>gi|448610849|ref|ZP_21661483.1| histone deacetylase [Haloferax mucosum ATCC BAA-1512]
gi|445743281|gb|ELZ94762.1| histone deacetylase [Haloferax mucosum ATCC BAA-1512]
Length = 337
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 168/318 (52%), Gaps = 25/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E +PA +A+VH AYV G G T A ++
Sbjct: 38 VEYVEAAPAEKSTVAAVHEDAYVDEFHD----------FCRSGGGNWDPDTVAVEQSWVA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+LA+AG + + D P F+L RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALASAGLAEWAARTALDGDDGRDTP--FSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVI 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG+++E G EG+T
Sbjct: 146 DDGLAERVAIFDWDVHHGNGTQDIFYDRDDVFYASIHEDGLYPGTGELEETGESGAEGTT 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+PL G+GD F E I P +RF PDL +VSAG+DAH DP++ ++ +T Y M
Sbjct: 206 LNVPLRAGAGDADYVYSFEEAIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAM 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L A++++L D + F LEGGY L++LS VA F G + + E+
Sbjct: 266 LTAHVRKLCDD-TDAAIAFVLEGGYGLDTLSEGVAIVHETFDGRHAMEPD--------ED 316
Query: 309 PSAKVKQAIERVKHIHSL 326
P+ K I+ V+ +H L
Sbjct: 317 PADKNIDLIDDVRDVHGL 334
>gi|448297976|ref|ZP_21488010.1| histone deacetylase [Natronorubrum tibetense GA33]
gi|445592702|gb|ELY46888.1| histone deacetylase [Natronorubrum tibetense GA33]
Length = 342
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 156/286 (54%), Gaps = 16/286 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ +E +G G T +E+ A
Sbjct: 38 VEYVEAEPCDIDRMAAVHEREYIESVEA----------FCADGGGNWDPDTTAVEETWDA 87
Query: 73 A--GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
+G+A + AA + F++ RPPGHHA+ MGFC N A+AA+YA
Sbjct: 88 VCYSSGLACWAAEAALEGEAGRKTPFSIGRPPGHHAVYDDAMGFCFVNNAAVAAQYALDS 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ ++RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G GDG G+T
Sbjct: 148 EDYDVERVAIVDWDVHHGNGTQDIFYDRDDVFFVSIHEKGLYPGTGAIDETGEGDGSGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDGEYLAAVEGPITTALTDYDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
+ + LA D + F LEGGY L+ L+ SVA F G EP
Sbjct: 268 MTDRFRTLA-DETDAALAFILEGGYGLDVLADSVAIVHETFDGREP 312
>gi|426409120|ref|YP_007029219.1| histone deacetylase [Pseudomonas sp. UW4]
gi|426267337|gb|AFY19414.1| histone deacetylase [Pseudomonas sp. UW4]
Length = 388
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 146/258 (56%), Gaps = 10/258 (3%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
F+PAS D+ VH YV + + G G T + + AAGA I
Sbjct: 76 FTPASEADLLRVHTPEYVDRILNPIGPVWSDA-----GDGETPVGPGSADIARLAAGAVI 130
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
+ ++V + +ALIRPPGHHAI MG+C+F N A+ R+ Q+ +KRV
Sbjct: 131 SAFNAVVSGTVTN----AYALIRPPGHHAIANQGMGYCIFHNTAVGIRHLQQTGAVKRVA 186
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGG 196
+ID+DVHHGNGT FYDDP + +S HQD YP G GK+ ++G G G G+ LN+PLP G
Sbjct: 187 VIDWDVHHGNGTETLFYDDPSVLTISLHQDDLYPIGRGKVQDIGTGPGLGANLNIPLPAG 246
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
SG A F +++P +RF+PDLI++++G+D+ +DP +G Y L + L
Sbjct: 247 SGRGAYLGAFERIVMPAVRRFQPDLIVIASGFDSAAMDPFGRQLLYSGAYRELTTQVMNL 306
Query: 257 AKDLCGSRCVFFLEGGYN 274
A+++C SR V EGGY+
Sbjct: 307 AEEVCKSRVVAVHEGGYD 324
>gi|188997126|ref|YP_001931377.1| histone deacetylase superfamily protein [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932193|gb|ACD66823.1| histone deacetylase superfamily [Sulfurihydrogenibium sp. YO3AOP1]
Length = 306
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 149/270 (55%), Gaps = 15/270 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +I +H Y ++ MD + G L T+ +++ ++ A GAG+ +
Sbjct: 50 ASAKEITLIHDIYYP---QEIMDFCAAGGGYL---DPDTHVGEYSYEAAVMAVGAGLEAI 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ K F +RPPGHHA MGFC+F N+AI ARY Q+ G +VFIID
Sbjct: 104 DNIVNGKIE----RAFCAVRPPGHHAEKDKAMGFCIFNNIAITARYVQQK-GFNKVFIID 158
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FD HHGNGT AFYDD +F+ STH+ YPGTG +E G G G G T N+PLP G+GD
Sbjct: 159 FDAHHGNGTQKAFYDDDTVFYFSTHEYPFYPGTGSKNEKGVGKGYGYTYNVPLPAGTGDE 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
++ + + + F PD+ILVSAGYD H DPL L+ +T + NI + A
Sbjct: 219 VYTEIYSQTLPELVKSFNPDIILVSAGYDLHQDDPLTYLEVSTEGIGTIVENILKSAD-- 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
VF LEGGYNLN+L SV + L
Sbjct: 277 --VPYVFMLEGGYNLNALGESVRLTIEKML 304
>gi|427429233|ref|ZP_18919269.1| Acetylspermidine deacetylase [Caenispirillum salinarum AK4]
gi|425880913|gb|EKV29607.1| Acetylspermidine deacetylase [Caenispirillum salinarum AK4]
Length = 309
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 150/271 (55%), Gaps = 12/271 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH +Y+ E+ MD G I+G T + + + +L AAGA V
Sbjct: 50 ATREQLMRVHPLSYI---ERVMDAVPHDGHHHIDGD--TVLSPESGEAALRAAGAVCTAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + R F +RPPGHHA + MGFCVF N AI A +A+ HGLKRV +ID
Sbjct: 105 DAVCKGEVRN----AFCPVRPPGHHAEREMAMGFCVFNNAAIGAYHARAEHGLKRVAVID 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT F+DDPD+F+ STHQ +P +G E G D + +N+PLP SG
Sbjct: 161 WDVHHGNGTQHIFWDDPDMFYASTHQFPQWPNSGAPAETGAHD---NIVNVPLPVRSGGD 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R + I+P + F PDLI++S G+DAH DP+A L F + + +A D
Sbjct: 218 EFRQAMSDEILPRLREFDPDLIIISCGFDAHASDPMAYLLFQVQDFVWATKELMAIADDC 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
C R V LEGGY++ +L+ RA +G
Sbjct: 278 CEGRVVSVLEGGYDIRALAGCTVAHVRALMG 308
>gi|448589664|ref|ZP_21649823.1| histone deacetylase [Haloferax elongans ATCC BAA-1513]
gi|445736092|gb|ELZ87640.1| histone deacetylase [Haloferax elongans ATCC BAA-1513]
Length = 336
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 167/320 (52%), Gaps = 29/320 (9%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG-----PTYATATTFQ 67
+E +PA +A+VH YV G G T A T+
Sbjct: 38 VEYVEAAPAVKSTVAAVHDDDYVDEFHD-----------FCRGGGGNWDPDTVAVEETWV 86
Query: 68 ESLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+LA+AG A A +++ R P F+L RPPGHHA+ MGFC F N A+AA+
Sbjct: 87 AALASAGLAEWAARSALSGDDGRRTP---FSLGRPPGHHAVEDDAMGFCFFNNAAVAAQA 143
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
+RV I D+DVHHGNGT D FYD D+F++S H+DG YPGTG++DE G EG
Sbjct: 144 VIDDDLAERVAIFDWDVHHGNGTQDIFYDRDDVFYVSIHEDGLYPGTGEVDETGADGAEG 203
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+TLN+PL G+GD F E I P +RF PDL +VSAG+DAH DP++ ++ +T Y
Sbjct: 204 TTLNIPLRAGAGDADYVYSFEETIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGY 263
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY 306
ML ++ L D + F LEGGY L++LS VA F G + +
Sbjct: 264 AMLTERVRDLCDD-TDTALSFVLEGGYGLDTLSEGVAIVHETFDGRLAMDPD-------- 314
Query: 307 EEPSAKVKQAIERVKHIHSL 326
E+P K I+ ++ +H L
Sbjct: 315 EDPEQKNLDLIDEIRDVHGL 334
>gi|444911854|ref|ZP_21232025.1| Acetylspermidine deacetylase [Cystobacter fuscus DSM 2262]
gi|444717630|gb|ELW58456.1| Acetylspermidine deacetylase [Cystobacter fuscus DSM 2262]
Length = 343
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 157/269 (58%), Gaps = 12/269 (4%)
Query: 14 ELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
E ++ PA+ +++A+VH+ + L +++ T + ++ ++ AA
Sbjct: 44 ERRSPRPATDEELAAVHSPRLLEALRGLRGKSTSL-------DPDTAMSPDSYDAAVLAA 96
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
GA + V+ V A + R FAL+RPPGHHA P+ MGFC+ N AIAA A+R G
Sbjct: 97 GASVQAVEEVMAGRARN----AFALVRPPGHHAEPEQAMGFCLLNNAAIAAEAARRL-GA 151
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
+RV I D+DVHHGNGT AF+ D+ ++S HQ YPGTG E+G G+G G T+N +
Sbjct: 152 QRVLIFDWDVHHGNGTQAAFWKRRDVLYMSAHQFPYYPGTGAPTEIGEGEGLGYTVNCGV 211
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
PGGS D + + +P A+ F+PDL+++SAG+DAH DP+ + T + +
Sbjct: 212 PGGSNDADYGALCERLFLPVARAFRPDLVIISAGFDAHREDPIGGMVVTERGFAAMCTAF 271
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+QLA+D CG R V LEGGY+L LS SV
Sbjct: 272 QQLARDYCGGRLVLLLEGGYSLEGLSRSV 300
>gi|398342792|ref|ZP_10527495.1| acetoin-histone deacetylase [Leptospira inadai serovar Lyme str.
10]
Length = 308
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 147/247 (59%), Gaps = 11/247 (4%)
Query: 41 AMDRASQQGIILIEGS-----GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLG 95
A DRA Q+ + I+G G T + +F+ +L AAG+G++L + + D G
Sbjct: 59 AHDRAHQERFMAIQGKTGGFDGDTPFSPKSFEAALIAAGSGVSLAKKILSE----DLDAG 114
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
AL+RPPGHHA MGFC+ N+AI A Y +++V+I+D+DVHHGNGT + FYD
Sbjct: 115 IALVRPPGHHAETGRAMGFCLLNNIAITAHYLLN-RNIRKVYILDWDVHHGNGTQEIFYD 173
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
+FF S HQ YPG+G E+G G G G TLN+PLP S ++ F E I+P
Sbjct: 174 SDKVFFASLHQYPFYPGSGSAREIGSGQGLGFTLNVPLPSHSSNSDYLKEFQEKIIPSIL 233
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P+ +L+SAG+DAH DPL + +T + ++K+ A GS+ + FLEGGY+L
Sbjct: 234 EFEPEFLLISAGFDAHKQDPLGGMSLSTNAFSEFTRSVKEAAFQ-SGSKIISFLEGGYDL 292
Query: 276 NSLSYSV 282
+L+ SV
Sbjct: 293 QALAESV 299
>gi|389845973|ref|YP_006348212.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
gi|448616412|ref|ZP_21665122.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
gi|388243279|gb|AFK18225.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
gi|445751067|gb|EMA02504.1| histone deacetylase [Haloferax mediterranei ATCC 33500]
Length = 337
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/314 (37%), Positives = 166/314 (52%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E +PA +A+VH AYV R T A ++ +LA+
Sbjct: 38 VEYIEAAPADKSTVAAVHEDAYVDEFHDFCQRGGGNW------DPDTVAVEESWVAALAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG S A + D P F++ RPPGHHA+ MGFC F N A+AA+
Sbjct: 92 AGLAEWAARSALAGDDGRDTP--FSIGRPPGHHAVEDDAMGFCFFNNAAVAAQAVIDDGL 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
+RV I D+DVHHGNGT D FYD D+F+ S H++G YPGTG+I+E G EGSTLN+P
Sbjct: 150 AERVAIFDWDVHHGNGTQDIFYDRDDVFYASIHEEGLYPGTGEIEETGEDGAEGSTLNIP 209
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L G+GD F E I P ++F PDL +VSAG+DAH DP++ ++ +T Y ML
Sbjct: 210 LRAGAGDADYVYSFEEAIAPAVEQFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAMLTKR 269
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+++L D+ + F LEGGY L++LS VA F G + + E+P+ +
Sbjct: 270 VQELCDDI-DTAIAFVLEGGYGLDTLSEGVAIVHETFDGRLAMDPD--------EDPAEE 320
Query: 313 VKQAIERVKHIHSL 326
I+ V+ H L
Sbjct: 321 NVDLIDEVRDAHGL 334
>gi|381204931|ref|ZP_09912002.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
JCVI-SC AAA005]
Length = 313
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 154/281 (54%), Gaps = 13/281 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E++ A + +I +H++ Y+ + +A + +GI+ G+ + TF +L A
Sbjct: 42 LEMRPGCTAELKEIQLLHSKKYIDSIREAAELG--RGIL---GTPDCIISPGTFGAALHA 96
Query: 73 AGAGIALVDSVA-ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
GA ++DSV + N+ D F IRPPGHHA MGFC NVAIAA + Q+
Sbjct: 97 VGA---VLDSVVQVADNKIDN--AFCAIRPPGHHAEHDAAMGFCFLNNVAIAAEFLQKNF 151
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGSTL 189
G +R+ I DFDVHHGNGT F + + STHQD YPGTG E G G G+G TL
Sbjct: 152 GYQRILIFDFDVHHGNGTQHLFEKSEKVLYASTHQDPRTCYPGTGFAHETGFGSGKGFTL 211
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N PLP G+ D F I+P + +KPD IL+SAG+D H DPLA L T Y+ +
Sbjct: 212 NFPLPPGTTDDRYLEFFQNKIIPQFEDYKPDFILLSAGFDGHTRDPLAMLDLTENCYHEI 271
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
++ LA+ R V LEGGY+L +L+ SV A L
Sbjct: 272 TKQMRTLAEKFASGRLVSLLEGGYDLEALALSVEAHILALL 312
>gi|62289415|ref|YP_221208.1| histone deacetylase family protein [Brucella abortus bv. 1 str.
9-941]
gi|82699342|ref|YP_413916.1| histone deacetylase family protein [Brucella melitensis biovar
Abortus 2308]
gi|237814903|ref|ZP_04593901.1| histone deacetylase family protein [Brucella abortus str. 2308 A]
gi|260754207|ref|ZP_05866555.1| histone deacetylase [Brucella abortus bv. 6 str. 870]
gi|260757427|ref|ZP_05869775.1| histone deacetylase [Brucella abortus bv. 4 str. 292]
gi|297247828|ref|ZP_06931546.1| histone deacetylase [Brucella abortus bv. 5 str. B3196]
gi|62195547|gb|AAX73847.1| histone deacetylase family protein [Brucella abortus bv. 1 str.
9-941]
gi|82615443|emb|CAJ10412.1| Histone deacetylase family [Brucella melitensis biovar Abortus
2308]
gi|237789740|gb|EEP63950.1| histone deacetylase family protein [Brucella abortus str. 2308 A]
gi|260667745|gb|EEX54685.1| histone deacetylase [Brucella abortus bv. 4 str. 292]
gi|260674315|gb|EEX61136.1| histone deacetylase [Brucella abortus bv. 6 str. 870]
gi|297174997|gb|EFH34344.1| histone deacetylase [Brucella abortus bv. 5 str. B3196]
Length = 337
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/290 (40%), Positives = 152/290 (52%), Gaps = 21/290 (7%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASV------HARAYVSGL-EKAMDRASQQGIILIEG 55
L SE G + L + A + H A S + E D + Q I+ ++G
Sbjct: 51 LMSELEGPDFYRLDRVEAPHAGEAAILLAHPEEHLEAVRSKIPEPVEDGEASQPIVKLDG 110
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
TY + + +L A GA +A VD V A+ N F RPPGHHA MG
Sbjct: 111 D--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------FVASRPPGHHAERSRAMG 162
Query: 114 FCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT 173
FCVF N+AIAAR+AQR HGL+R+ I+D DVHHGNGT D F DDP + F STHQ YPG+
Sbjct: 163 FCVFNNIAIAARHAQRHHGLERIAIVDGDVHHGNGTQDIFKDDPGVMFCSTHQFPLYPGS 222
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G E G G+ +N PL +G R F+ I+P F+PDLIL+SAG+DAH
Sbjct: 223 GDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDNFRPDLILISAGFDAHFR 278
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
DPLA + + + + A+ C R V LEGGY+L LS S +
Sbjct: 279 DPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLEGLSQSAS 328
>gi|398866297|ref|ZP_10621796.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
gi|398241348|gb|EJN27002.1| deacetylase, histone deacetylase/acetoin utilization protein
[Pseudomonas sp. GM78]
Length = 370
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 151/267 (56%), Gaps = 28/267 (10%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA------ 71
F+PAS D+ VH YV DR ++ +GP ++ A + +
Sbjct: 58 FTPASEADLLRVHTPEYV-------DR-------ILNPTGPVWSDAGDGETPVGPGSADI 103
Query: 72 ---AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
AAGA I+ ++V + +ALIRPPGHHAI MG+C+F N A+ R+ Q
Sbjct: 104 ARLAAGAVISAFNAVVSGTVTN----AYALIRPPGHHAIANQGMGYCIFHNTAVGIRHLQ 159
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGS 187
+ +KRV +ID+DVHHGNGT FYDDP + +S HQD YP G GK+ ++G G G G+
Sbjct: 160 QTGAVKRVAVIDWDVHHGNGTETLFYDDPSVLTISLHQDDLYPIGRGKVQDIGTGPGLGA 219
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
LN+PLP GSG A F +++P +RF+PDLI++++G+D+ +DP +G Y
Sbjct: 220 NLNIPLPAGSGRGAYLGAFERIVMPAVRRFQPDLIVIASGFDSAAMDPFGRQLLYSGAYR 279
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYN 274
L + LA+++C SR V EGGY+
Sbjct: 280 ELTTQVMNLAEEVCKSRVVAVHEGGYD 306
>gi|115372586|ref|ZP_01459893.1| histone deacetylase/AcuC/AphA family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115370307|gb|EAU69235.1| histone deacetylase/AcuC/AphA family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 587
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/196 (48%), Positives = 126/196 (64%), Gaps = 1/196 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHHA P MGFC+F NVAIAA +R G +RV ++D+DVHHGNGT AF
Sbjct: 361 FALVRPPGHHAEPGRAMGFCLFNNVAIAAEAGRRL-GAERVLVLDWDVHHGNGTQAAFEG 419
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D+ + S HQ YPGTG EVG+G GEG ++N LPGG+ D+ R++F ++++P A
Sbjct: 420 RRDVLYQSVHQYPYYPGTGAPREVGQGAGEGFSVNCALPGGATDSDYRSIFEDLLLPIAD 479
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P L+LVSAG+D H DPL + T + + A ++ LA+ LCG + V LEGGY+L
Sbjct: 480 SFQPQLMLVSAGFDPHRNDPLGGMLVTERGFAAMCAGLRSLAERLCGGKLVLVLEGGYSL 539
Query: 276 NSLSYSVADSFRAFLG 291
LS SV G
Sbjct: 540 EGLSQSVHACIEVLAG 555
>gi|126736179|ref|ZP_01751922.1| histone deacetylase family protein [Roseobacter sp. CCS2]
gi|126714345|gb|EBA11213.1| histone deacetylase family protein [Roseobacter sp. CCS2]
Length = 307
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 143/254 (56%), Gaps = 13/254 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ H +A+V + A A Q+G ++ T+ + T + + AAG + V
Sbjct: 47 AAEDDLLRAHPKAHVDAIHAA---APQEGWRSLDAD--THMSVGTLKAAYRAAGGVVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + FA +RPPGHHA + MGFC FGNV I A++A HGL RV I+D
Sbjct: 102 DMVLGGEVAN----AFAAVRPPGHHAERQTAMGFCFFGNVVIGAKHALDHHGLDRVAIVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D DDP I F STHQ YPGTG EV G + LN+PLP G+G
Sbjct: 158 FDVHHGNGTQDLVEDDPRILFCSTHQSPLYPGTGAAHEV----GVDNVLNVPLPEGTGSK 213
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A R V V++P F P L+++SAG+DAH+ DPLA + TT + + + +A
Sbjct: 214 AFRDVMERVVLPRVDAFSPQLVIISAGFDAHMDDPLAGMNLTTADFAWVTERLCDVADKH 273
Query: 261 CGSRCVFFLEGGYN 274
C R V LEGGY+
Sbjct: 274 CQGRVVSSLEGGYD 287
>gi|310823792|ref|YP_003956150.1| histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396864|gb|ADO74323.1| Histone deacetylase family protein [Stigmatella aurantiaca DW4/3-1]
Length = 342
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/197 (48%), Positives = 126/197 (63%), Gaps = 1/197 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL+RPPGHHA P MGFC+F NVAIAA +R G +RV ++D+DVHHGNGT AF
Sbjct: 116 FALVRPPGHHAEPGRAMGFCLFNNVAIAAEAGRRL-GAERVLVLDWDVHHGNGTQAAFEG 174
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D+ + S HQ YPGTG EVG+G GEG ++N LPGG+ D+ R++F ++++P A
Sbjct: 175 RRDVLYQSVHQYPYYPGTGAPREVGQGAGEGFSVNCALPGGATDSDYRSIFEDLLLPIAD 234
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P L+LVSAG+D H DPL + T + + A ++ LA+ LCG + V LEGGY+L
Sbjct: 235 SFQPQLMLVSAGFDPHRNDPLGGMLVTERGFAAMCAGLRSLAERLCGGKLVLVLEGGYSL 294
Query: 276 NSLSYSVADSFRAFLGE 292
LS SV G
Sbjct: 295 EGLSQSVHACIEVLAGR 311
>gi|148559088|ref|YP_001258451.1| histone deacetylase family protein [Brucella ovis ATCC 25840]
gi|148370345|gb|ABQ60324.1| histone deacetylase family protein [Brucella ovis ATCC 25840]
Length = 316
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 139/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+ + I+D+DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLECIAIVDWDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG+DAH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFDAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|99082763|ref|YP_614917.1| histone deacetylase superfamily protein [Ruegeria sp. TM1040]
gi|99039043|gb|ABF65655.1| histone deacetylase superfamily [Ruegeria sp. TM1040]
Length = 308
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 157/277 (56%), Gaps = 16/277 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DDI H Y++ L +A+ ++ + T+ +A + + A GA + V
Sbjct: 47 AAEDDILRAHPATYLADLRRALPTEGRRAL-----DADTWMSAGSLDAAFRAVGAAVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A D F RPPGHHA PMGFC+FG A+AA++A HGLKRV ++D
Sbjct: 102 DMVLAG----DVQNAFCATRPPGHHAETDTPMGFCLFGTAALAAKHALDHHGLKRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+ +S+HQ +PG+G D+ G D + +NLPL +G
Sbjct: 158 FDVHHGNGTQDLLWDERRALVISSHQMPLWPGSGNSDDDGAYD---NVMNLPLRPETGGD 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
MR ++ + FKP+LI++SAG+DAH DPLA L + T + L + + LA++L
Sbjct: 215 EMRQIYQTQAFARLRAFKPELIILSAGFDAHREDPLAQLNWKTDDFRWLTSELCLLAQEL 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
C R V LEGGY+LN+L AD+ +A + E KA+
Sbjct: 275 CQGRIVSTLEGGYDLNAL----ADAAKAHVEELIKAA 307
>gi|456356896|dbj|BAM91341.1| putative deacetylase [Agromonas oligotrophica S58]
Length = 309
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 144/262 (54%), Gaps = 12/262 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H YV+ L + A GII ++G T + T++ + G +A +SV + +++
Sbjct: 59 HNEHYVTELRQM---APTSGIIYLDGD--TSMSPGTWEAVMRGVGGAVAATESVMSGRHK 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F +RPPGHHA PMGFC F NVAIAARYAQR G++R I+DFDVHHGNGT
Sbjct: 114 N----AFVAVRPPGHHAEIAKPMGFCFFDNVAIAARYAQRTFGIERAAIVDFDVHHGNGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+ D + + STHQ +PGTG E G D + +N PL G R+ F +
Sbjct: 170 QDIFWADKSVMYCSTHQMPLFPGTGARGERGEHD---TIVNAPLASEDGSLEFRSAFENL 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P +F P+L+++SAG+DAH DPLASL + + + LA G R V L
Sbjct: 227 ILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMDLADKTAGGRVVSVL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLG 291
EGGY+L L SV+ A G
Sbjct: 287 EGGYDLQGLKESVSAHVAALTG 308
>gi|90420125|ref|ZP_01228033.1| histone deacetylase family protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90335459|gb|EAS49209.1| histone deacetylase family protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 308
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/269 (39%), Positives = 146/269 (54%), Gaps = 13/269 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S++ I H YV K ++G++ ++ T + +F +L GA A VD
Sbjct: 51 SLEAIYRCHPEDYV---RKVATTIPEEGLVRVDND--TIVSPKSFTAALHGVGAATAAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
V + F RPPGHHA + MGFC+F N AIAAR+A+ HGL RV I+D+
Sbjct: 106 DVMTDECDN----VFVAARPPGHHAERQTAMGFCLFNNAAIAARHARTVHGLDRVAIVDW 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F++DP + + STHQ YPGTG E G+G+ +N PL G G
Sbjct: 162 DVHHGNGTQDIFWEDPSVMYCSTHQMPLYPGTGAKGET----GQGNIVNAPLSAGDGSDV 217
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
+ F ++P + F PDL+++SAG+DAH DPLA+LQ T + A + LA C
Sbjct: 218 FKDAFRSRVLPALRDFHPDLVIISAGFDAHHRDPLANLQLTEADFDWATAELMALADRAC 277
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY+L+ L+ S + +
Sbjct: 278 DGRLVSLLEGGYDLHGLAVSTTAHVKRMM 306
>gi|407777511|ref|ZP_11124780.1| histone deacetylase superfamily protein [Nitratireductor pacificus
pht-3B]
gi|407300760|gb|EKF19883.1| histone deacetylase superfamily protein [Nitratireductor pacificus
pht-3B]
Length = 308
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/248 (42%), Positives = 141/248 (56%), Gaps = 10/248 (4%)
Query: 36 SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLG 95
S L+K ++G+ I+ T + + + +L A G A VD V + +
Sbjct: 62 SHLDKVKAAIPEEGLARIDED--TTVSPRSLEAALTAIGGATAAVDDVFSGEAAN----V 115
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F RPPGHHA MGFC+F N AIAAR+AQ+ HG +RV IID+DVHHGNGT D F+D
Sbjct: 116 FVAARPPGHHAEKTRAMGFCLFNNAAIAARHAQQRHGAERVAIIDWDVHHGNGTQDIFWD 175
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + + STHQ YPG G DE G G+ +N PL GSG A R F +++P +
Sbjct: 176 DPSVLYCSTHQMPLYPGGGARDET----GAGNIVNAPLAAGSGSEAFREAFDTLVLPAIE 231
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
RF PDLI++SAG+DAH DPLA + + + + A+ L R V LEGGY+L
Sbjct: 232 RFAPDLIVISAGFDAHRRDPLAEINLEAEDFDWATGVLMERAERLSQGRLVSLLEGGYDL 291
Query: 276 NSLSYSVA 283
L+ SVA
Sbjct: 292 QGLAVSVA 299
>gi|114321197|ref|YP_742880.1| histone deacetylase superfamily protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227591|gb|ABI57390.1| histone deacetylase superfamily [Alkalilimnicola ehrlichii MLHE-1]
Length = 365
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 110/230 (47%), Positives = 145/230 (63%), Gaps = 10/230 (4%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG IA V++V D FAL+RPPGHHA GFC+F NVA+AA +AQ A
Sbjct: 123 AAGTAIAAVEAVVQG----DAEAAFALVRPPGHHAEAVRARGFCLFNNVAVAAAHAQAAL 178
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLN 190
G +RV I+D+DVHHGNGT D F DPD+ F TH+ YPG+G+++EVG G GEG+T+N
Sbjct: 179 GCQRVLIVDWDVHHGNGTQDIFRADPDVLFFDTHRASPFYPGSGRLEEVGHGLGEGTTVN 238
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G+GD A+ FHE++VP A F+PDL+LVSAG+D H LD +L + + L
Sbjct: 239 VPLPPGAGDAALLRAFHEILVPAADWFQPDLVLVSAGFDPHRLD--QALNMSYEGFAALT 296
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG---EPSKAS 297
A ++++A R F LEGGYNL +LS V G EP +A+
Sbjct: 297 AVLQEIATRHAQGRLAFVLEGGYNLEALSRGVRTVLEVLAGAELEPLQAA 346
>gi|262197232|ref|YP_003268441.1| histone deacetylase [Haliangium ochraceum DSM 14365]
gi|262080579|gb|ACY16548.1| Histone deacetylase [Haliangium ochraceum DSM 14365]
Length = 359
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 168/295 (56%), Gaps = 15/295 (5%)
Query: 7 FRGSEIIELKNFSP---ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
R + + E P AS D++ VH Y+S L + + Q G + G TY +
Sbjct: 34 LRAAHLRERATLLPVREASEDELGRVHHAGYLSDLTRTV--PGQSGWL----DGDTYFSP 87
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
T++ L AAGA + + V ++ + G AL+RPPGHHA MGFC+ N+A+A
Sbjct: 88 GTWEAVLKAAGAVVDVALGVLDARFQ----RGMALVRPPGHHAEADRAMGFCLINNIAVA 143
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
A A+ A RV I+D+DVHHGNGT F +DP + FLS HQ YPGTG EVGRG
Sbjct: 144 AAAARAAG-AARVAIVDWDVHHGNGTQHIFEEDPSVLFLSCHQYPFYPGTGAPSEVGRGA 202
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
G G+T+N+ LP G+GD A +EV P +RF+PD+IL+SAG+DA+V DPLA ++ +
Sbjct: 203 GVGATVNVGLPAGAGDRAYMATMNEVFAPALRRFQPDIILLSAGFDAYVDDPLAGMRVSL 262
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
G + LA + +LA +LCG R LEGGY+L L AF PS +E
Sbjct: 263 GGFRALAGTLARLADELCGGRLACALEGGYHLKGLGAGTVALLDAFE-HPSAEAE 316
>gi|423189423|ref|ZP_17176033.1| hypothetical protein M1M_01105 [Brucella abortus bv. 1 str. NI259]
gi|374557342|gb|EHR28739.1| hypothetical protein M1M_01105 [Brucella abortus bv. 1 str. NI259]
Length = 316
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 139/247 (56%), Gaps = 14/247 (5%)
Query: 39 EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGF 96
E D + Q I+ ++G TY + + +L A GA +A VD V A+ N F
Sbjct: 73 EPVEDGEASQPIVKLDGD--TYVSPKSMDAALTAIGAAMAAVDDVMSGAADNV------F 124
Query: 97 ALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDD 156
RPPGHHA MGFCVF N+AIAAR+AQR HGL+R+ I+D DVHHGNGT D F DD
Sbjct: 125 VASRPPGHHAERSRAMGFCVFNNIAIAARHAQRHHGLERIAIVDGDVHHGNGTQDIFKDD 184
Query: 157 PDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
P + F STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 185 PGVMFCSTHQFPLYPGSGDKHETGVGN----IVNAPLSPNTGSREFREAFNSRILPALDN 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
F+PDLIL+SAG++AH DPLA + + + + A+ C R V LEGGY+L
Sbjct: 241 FRPDLILISAGFNAHFRDPLAEINLDESDFDWATGKLMERAERFCDHRLVSVLEGGYDLE 300
Query: 277 SLSYSVA 283
LS S +
Sbjct: 301 GLSQSAS 307
>gi|338174025|ref|YP_004650835.1| hypothetical protein PUV_00310 [Parachlamydia acanthamoebae UV-7]
gi|336478383|emb|CCB84981.1| uncharacterized protein slr0245 [Parachlamydia acanthamoebae UV-7]
Length = 321
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 150/263 (57%), Gaps = 7/263 (2%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +DI H Y ++ + A G + +G +F +L A G + V
Sbjct: 54 ATKEDILLCHKEDYYHLVQNEVKFAESNGSSTL-STGDVNICPQSFDVALLAVGGVLTAV 112
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ-RAHGLKRVFII 139
D+V + + F ++RPPGHHA GFC+F NVAI ARYAQ R +K+V I+
Sbjct: 113 DAVLNKEAQN----AFCIVRPPGHHAKKAQGKGFCLFNNVAIGARYAQKRVPSIKKVLIV 168
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG-SG 198
D+D+HHG+GT D F +DP +F+ STH+ G+YPGTG ++G+G G+ LN P+ GG +
Sbjct: 169 DWDLHHGDGTQDIFEEDPSVFYFSTHEQGNYPGTGDNQDIGKGQAAGTMLNCPIKGGENA 228
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ F++ ++P + F PDL+++SAG+DAH LDPL + T + L KQ+A
Sbjct: 229 RFEILKAFYKKLIPAMESFAPDLVMISAGFDAHYLDPLGNFNLTEIDFAELTKLTKQIAH 288
Query: 259 DLCGSRCVFFLEGGYNLNSLSYS 281
SR + LEGGY+L +LS S
Sbjct: 289 QYAESRIISVLEGGYHLEALSRS 311
>gi|78066701|ref|YP_369470.1| histone deacetylase superfamily protein [Burkholderia sp. 383]
gi|77967446|gb|ABB08826.1| Histone deacetylase superfamily [Burkholderia sp. 383]
Length = 369
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 148/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++L+ PAS D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDLRGAEPASTTDLLRIHPAHYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG I VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAITAVDTVLGERAAN----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G++R+ +ID+DVHHGNGT +YDDPD +S HQD + PG D+ G G G G+ LN
Sbjct: 170 GIERIAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGADDRGEGAGAGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI++++G DA +DPLA +Q T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVLPALERFRPELIVIASGLDASAVDPLARMQLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|399994529|ref|YP_006574769.1| histone deacetylase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398659084|gb|AFO93050.1| histone deacetylase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 308
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/256 (43%), Positives = 155/256 (60%), Gaps = 12/256 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DDI +H +Y++ L KA+ ++G I+G T+ + + + AAGA + V
Sbjct: 47 AAEDDILRIHPASYLADLRKAL---PKEGFGRIDGD--TFLSPGSLDAAFRAAGAAVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + FA +RPPGHHA MGFC FGN A+AA++A HGL RV ++D
Sbjct: 102 DMVLGGEAQN----AFAAVRPPGHHAETDTAMGFCFFGNAALAAKHALDHHGLARVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+P F+S+ Q +PG+G+ +E G G LNLPLP GSG
Sbjct: 158 FDVHHGNGTQDLLWDEPRALFISSQQMPLWPGSGRPEEDGV---HGQILNLPLPPGSGGV 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
M+ + + P + FKP+LI+VSAG+DAH DPLA L ++T + L+ + LA +L
Sbjct: 215 QMKAAYVDQAFPRLRAFKPELIIVSAGFDAHQDDPLAELNWSTEDFRWLSRELCALAAEL 274
Query: 261 CGSRCVFFLEGGYNLN 276
CG R V LEGGY+LN
Sbjct: 275 CGGRIVSTLEGGYDLN 290
>gi|220921867|ref|YP_002497168.1| histone deacetylase superfamily protein [Methylobacterium nodulans
ORS 2060]
gi|219946473|gb|ACL56865.1| histone deacetylase superfamily [Methylobacterium nodulans ORS
2060]
Length = 309
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 150/263 (57%), Gaps = 14/263 (5%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H AYV + +A A Q G++ I+ T + T + L + GA VD V A K
Sbjct: 59 HPEAYVEAIAEA---APQAGLVAIDSD--TVMSPGTLEAVLRSLGAARQAVDEVMAGKVA 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
FA +RPPGHHA + MGFCVF A+A R+AQ++ G +RV ++D+DVHHGNG+
Sbjct: 114 N----AFAAMRPPGHHAERRRAMGFCVFNQAAVAVRHAQKSFGAERVALVDWDVHHGNGS 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHE 208
D F+ D + + STHQ YPGTG E RGD + + +N+PL PG GD R F +
Sbjct: 170 QDIFWSDRSVLYCSTHQMPLYPGTGAASE--RGDHD-TIVNVPLRPGDDGDR-FREAFEQ 225
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
I+P F PDLI++SAG+DAH DPLA+LQ T + + +A G R V
Sbjct: 226 GILPRVDAFHPDLIVISAGFDAHWRDPLANLQLTEADFAWATRRLMAIADRRAGGRVVSV 285
Query: 269 LEGGYNLNSLSYSVADSFRAFLG 291
LEGGY+L+ LS SVA A +G
Sbjct: 286 LEGGYDLDGLSKSVAAHVEALMG 308
>gi|414163309|ref|ZP_11419556.1| hypothetical protein HMPREF9697_01457 [Afipia felis ATCC 53690]
gi|410881089|gb|EKS28929.1| hypothetical protein HMPREF9697_01457 [Afipia felis ATCC 53690]
Length = 310
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 151/269 (56%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
++ + H +YV ++ + + +QGI+ I+G T + T++ ++ G A VD+
Sbjct: 53 IETVKLCHDESYV---DEIREMSPKQGIVYIDGD--TMMSPGTWEAAMRGVGGANAGVDA 107
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V + K + F RP GHHA MGFC+F AIAARYAQ HG+ RV ++DFD
Sbjct: 108 VVSGKAQNV----FVGTRPCGHHAERNRAMGFCIFDQAAIAARYAQTKHGIGRVAVVDFD 163
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNG+ D F+ DP + + STHQ +PGTG E G D + +N P+ G G T
Sbjct: 164 VHHGNGSQDIFWADPTVMYCSTHQMPLFPGTGATQERGEHD---TIVNAPMHPGDGGTIF 220
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R F VI+P Q+F P+LI++SAG+DAH DPLA++Q + + + +A G
Sbjct: 221 RQAFEGVILPQLQKFSPELIIISAGFDAHWRDPLANIQLDEKDFGWVTKKLMDVADKSAG 280
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L S+ + A +G
Sbjct: 281 GRIVSVLEGGYDLQGLHDSIVEHVSALMG 309
>gi|195356210|ref|XP_002044573.1| GM20078 [Drosophila sechellia]
gi|194132204|gb|EDW53826.1| GM20078 [Drosophila sechellia]
Length = 619
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 176/321 (54%), Gaps = 23/321 (7%)
Query: 12 IIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTF 66
+ ++K S A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 61 LTQMKQLSARAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGIYNSVYLHPRTF 117
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
++ AAG+ + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+Y
Sbjct: 118 DCAVLAAGSVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQY 173
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGR 181
A R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+
Sbjct: 174 AIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGK 233
Query: 182 GDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G G G +N+P G GD F ++++P A F P L+LVSAG+DA + DPL +
Sbjct: 234 GAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIAYEFNPQLVLVSAGFDAAIGDPLGGCK 293
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
T Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 294 VTPEGYGMLTHWLSALAS----GRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLG 349
Query: 301 NPAILYEEPSAKVKQAIERVK 321
A L + P+ + +E ++
Sbjct: 350 ATA-LQKPPTVAFQSCVESLQ 369
>gi|427778695|gb|JAA54799.1| Putative hdac6 [Rhipicephalus pulchellus]
Length = 587
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 166/311 (53%), Gaps = 21/311 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+VD++ VH + YV + + + I L E Y TF +L AAG+ + LV
Sbjct: 134 ATVDELLMVHDKKYVQKMRGCQEMKNADLIKLQEKYPSVYLCRDTFSSALLAAGSLLQLV 193
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +K + G ALIRPPGHHA GFC+F NVAIAAR+A +GL+R+ I+D
Sbjct: 194 DAVCTNKCQN----GMALIRPPGHHAERGEAGGFCIFNNVAIAARHAIETYGLQRILILD 249
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPLPG 195
+DVHHGNGT AFYDDP + +LS H+ +GS +P + D VG G G+G +N+
Sbjct: 250 WDVHHGNGTQHAFYDDPRVLYLSIHRYDNGSFFPCLPEADFGAVGEGAGQGFNINVAWNS 309
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D T F ++++P A + P+L+LVS+G+D+ V DPL + T Y A++
Sbjct: 310 EGMSDGDYLTAFFQLVLPVAYAYNPELVLVSSGFDSCVGDPLGYCRVTAEAY----AHLT 365
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
L L R + LEGGYNL+ L +V A LG P + P
Sbjct: 366 HLLLPLARGRVILTLEGGYNLSKLPSAVCHCVSALLG-------LRPPQLRTAAPCPSAV 418
Query: 315 QAIERVKHIHS 325
Q+I R HS
Sbjct: 419 QSIRRTLGAHS 429
>gi|110633089|ref|YP_673297.1| histone deacetylase superfamily protein [Chelativorans sp. BNC1]
gi|110284073|gb|ABG62132.1| histone deacetylase superfamily [Chelativorans sp. BNC1]
Length = 308
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 143/254 (56%), Gaps = 13/254 (5%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H AY+ +E+ + +G++ I+ T + ++ +L A G +A VD V +
Sbjct: 59 HMDAYIRRMEREI---PAEGMVRIDVD--TVVSPISWDAALTAVGGALAAVDDVFTGRAD 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F RPPGHHA MGFC+F N AIAAR+AQ+AHG +RV I+D+DVHHGNGT
Sbjct: 114 N----AFVAARPPGHHAERNRAMGFCLFNNAAIAARHAQKAHGAERVAIVDWDVHHGNGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+DDP + + STHQ YPGTG E G G+ +N+PL G+ R V
Sbjct: 170 QDIFWDDPSVLYCSTHQMPLYPGTGTESET----GAGNIVNVPLAPGADGGDFREALEAV 225
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P F+PDLI++SAG+DAH DPLA L F + A + + A +R V L
Sbjct: 226 ILPRINEFQPDLIIISAGFDAHYRDPLAQLNFDERDFGWATAMLMERAGRWSSNRLVSLL 285
Query: 270 EGGYNLNSLSYSVA 283
EGGY+L L SVA
Sbjct: 286 EGGYDLEGLGLSVA 299
>gi|383458397|ref|YP_005372386.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
gi|380730921|gb|AFE06923.1| histone deacetylase family protein [Corallococcus coralloides DSM
2259]
Length = 348
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 155/268 (57%), Gaps = 12/268 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
+I +VH A++ +EK R + T + + + AAGA + V++V
Sbjct: 61 EILAVHTPAHLDAMEKLGGRFERI-------DEDTVVSPDSIDAARLAAGAAVQAVEAVM 113
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
A R FAL+RPPGHHA P+ MGFC++ NVAIAA +R G +RV ++D+DVH
Sbjct: 114 AGTARN----AFALVRPPGHHAEPERAMGFCLYNNVAIAAEAGRRL-GAERVLVLDWDVH 168
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNGT AF+ D+ + S HQ YPG+G EVGRG+G+G T+N LPGG+ D
Sbjct: 169 HGNGTQAAFWGRRDVLYQSVHQFPYYPGSGAAPEVGRGEGQGFTVNCGLPGGNTDADYGM 228
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
+F E+++P AQ ++PDL+LVSAG+D H DP+ + T + + +++LA+++ G +
Sbjct: 229 IFEELLLPVAQAYRPDLVLVSAGFDPHRADPIGGMDVTERGFAAMCTAVRKLAEEVSGGK 288
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLGE 292
LEGGY+L LS SV G
Sbjct: 289 LALVLEGGYSLEGLSNSVHACIEVLAGR 316
>gi|62642129|gb|AAX92703.1| histone deacetylase [Picea abies]
Length = 198
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 109/130 (83%), Gaps = 1/130 (0%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
MELT EFRG E+I ++NF ASVDDI +VH+ AYV GLEK M+ A+Q+G+I IEGSGPTY
Sbjct: 68 MELTPEFRGKEVIRIQNFRSASVDDITAVHSSAYVMGLEKIMETAAQEGLIHIEGSGPTY 127
Query: 61 ATATTFQESLAAAGAGIALVD-SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
ATATTF ES+ AAGAGI + D VAASK +PP GFAL+RPPGHHA+P+GPMGFCVFGN
Sbjct: 128 ATATTFSESMFAAGAGITVTDLVVAASKITANPPSGFALVRPPGHHAVPRGPMGFCVFGN 187
Query: 120 VAIAARYAQR 129
VAIAARYAQR
Sbjct: 188 VAIAARYAQR 197
>gi|257053316|ref|YP_003131149.1| histone deacetylase superfamily [Halorhabdus utahensis DSM 12940]
gi|256692079|gb|ACV12416.1| histone deacetylase superfamily [Halorhabdus utahensis DSM 12940]
Length = 336
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHHA+ MGFC N AIAA +A R G+ RV I+D+DVHHGNGT D FYD
Sbjct: 113 FSLGRPPGHHAVEDDAMGFCFLNNAAIAAEHALRRDGVDRVAILDWDVHHGNGTQDIFYD 172
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D+++ S H++G YPGTG + E G G G TLN+P P GSGD V EV+ P +
Sbjct: 173 RSDVYYASFHEEGLYPGTGDVGETGADAGRGRTLNVPFPSGSGDADYLAVHREVVAPEFE 232
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+PDLI+VSAG+DAH DP++ + +T Y +LA + +LA D + F LEGGY L
Sbjct: 233 NFEPDLIIVSAGFDAHENDPISRMLVSTAGYGVLAERVHELA-DRIDAGLAFVLEGGYGL 291
Query: 276 NSLSYSVADSFRAFLGEPSKASE 298
+LS V + GE + + E
Sbjct: 292 ETLSAGVREIHEVLNGEHADSIE 314
>gi|195566858|ref|XP_002106992.1| HDAC6 [Drosophila simulans]
gi|194204389|gb|EDX17965.1| HDAC6 [Drosophila simulans]
Length = 777
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 176/321 (54%), Gaps = 23/321 (7%)
Query: 12 IIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTF 66
+ ++K S A+ D++ H RA+V+ + + + R ++ L + +G Y TF
Sbjct: 219 LTQMKQLSARAATTDEVCLAHTRAHVNTVRRLLGREPKE---LHDAAGVYNSVYLHPRTF 275
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
++ AAG+ + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+Y
Sbjct: 276 DCAVLAAGSVLQAVDSVLRGESRS----GICNVRPPGHHAEQDHPHGFCIFNNVAIAAQY 331
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGR 181
A R GL+RV I+D+DVHHGNGT F +P + ++S H + GS +P G D VG+
Sbjct: 332 AIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGK 391
Query: 182 GDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
G G G +N+P G GD F ++++P A F P L+LVSAG+DA + DPL +
Sbjct: 392 GAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIAYEFNPQLVLVSAGFDAAIGDPLGGCK 451
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
T Y ML + LA R + LEGGYN+NS+SY++ + LG+P +
Sbjct: 452 VTPEGYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQLG 507
Query: 301 NPAILYEEPSAKVKQAIERVK 321
A L + P+ + +E ++
Sbjct: 508 ATA-LQKPPTVAFQSCVESLQ 527
>gi|206560367|ref|YP_002231131.1| histone deacetylase family protein [Burkholderia cenocepacia J2315]
gi|198036408|emb|CAR52304.1| histone deacetylase family protein [Burkholderia cenocepacia J2315]
Length = 375
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 149/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++L+ +PA+ D+ +H Y+ D G + G G +++ +
Sbjct: 67 LDLRGAAPATTADLLRIHPAHYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 119
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 120 SAGLAIAAVDAVVGERAAN----AFSLSRPPGHHCLRDRPMGFCMLANIPIAIEAARAKH 175
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G++RV +ID+DVHHGNGT +YDDPD +S HQD + PG D+ G G G G+ LN
Sbjct: 176 GIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGADDRGEGAGIGANLN 235
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P RF+P+LI++++G DA +DPLA +Q T +Y +
Sbjct: 236 VPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVDPLARMQLHTDSYRFMT 295
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 296 RAVKEAAQRHCGGRLVIVHEGGYS 319
>gi|424888378|ref|ZP_18311981.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WSM2012]
gi|393173927|gb|EJC73971.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WSM2012]
Length = 311
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/277 (39%), Positives = 148/277 (53%), Gaps = 22/277 (7%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAM----DRASQQGIILIEGSGPTYATATTF 66
E +E + AS D + H +++ + + + DR +Q TYA+A +
Sbjct: 40 ERLERRQAPRASEDSVLLAHPEEHLAAVMREIPEEEDRINQL-------EADTYASARSL 92
Query: 67 QESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
Q +L G +A VD V A+ N F RPPGHHA MGFC F N AIAA
Sbjct: 93 QAALTGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKMTAMGFCFFNNAAIAA 146
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
R+AQ+ HG +RV IID+DVHHGNGT D F+DDP + F STHQ YPG+G DE G+
Sbjct: 147 RHAQKRHGAERVAIIDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGSGAKDEQGK--- 203
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+ +N PL G R F ++P F+PDLI++SAG+DAH DPLA + T
Sbjct: 204 HNTIVNAPLSPNVGSDHFREAFKSRVLPAVADFRPDLIIISAGFDAHHRDPLAQINLTGE 263
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + +LA +R V LEGGY+L L+ S
Sbjct: 264 DFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|301102851|ref|XP_002900512.1| histone deacetylase, putative [Phytophthora infestans T30-4]
gi|262101775|gb|EEY59827.1| histone deacetylase, putative [Phytophthora infestans T30-4]
Length = 370
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 172/316 (54%), Gaps = 22/316 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA--TATTFQESLAAAGAGIA 78
A++ + VH R Y+ LE+ R ++G G+ A + F + +AG +A
Sbjct: 61 ATMIQLERVHTRRYLEELEQLSAR--EEG-----GNAGEEAPFSQLAFDIARLSAGGVLA 113
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRV 136
VD+V + R D +AL RPPGHHA+ MGFC+ NVAI A++ + +K++
Sbjct: 114 AVDAVM--EGRVDT--AYALTRPPGHHAVADRGMGFCLLNNVAITAKHLLETYSSQIKKI 169
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPG 195
I+D+DVHHGNGT +AFYDD + F+S HQ +YP TGKI E G G G T+N+PLP
Sbjct: 170 AIVDYDVHHGNGTQEAFYDDDRVLFVSLHQANNYPADTGKITERGEDKGLGFTVNVPLPP 229
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
GSG A F V++P + FKPD +LVS+G+DA DPLA++ ++ + +A +
Sbjct: 230 GSGSGAYEYAFRNVVIPSLESFKPDFVLVSSGFDASYADPLAAMILSSSVFRFMAHEVVD 289
Query: 256 LAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI------LYEEP 309
+AK +C R VF EGGY+ + + A LG + +P + Y+E
Sbjct: 290 VAKRICAGRIVFAHEGGYSETYVPFCGAAVIEELLGIQDVDKQIKDPFLSEVERWEYQEL 349
Query: 310 SAKVKQAIERVKHIHS 325
K+ ++ V +H+
Sbjct: 350 QEHQKKVVDAVLELHA 365
>gi|448356407|ref|ZP_21545140.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
gi|445653440|gb|ELZ06311.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
Length = 342
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 121/300 (40%), Positives = 166/300 (55%), Gaps = 25/300 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E P +DDIA+VH R YV ++ +G G T A T+
Sbjct: 38 VEYVEADPCPIDDIAAVHDRDYVESVKD----------FCADGGGNWDPDTTAVEATWDA 87
Query: 69 SLAAAGAGIALVDS-VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
A+AG VD+ +A + R P FA+ RPPGHHA+P MGFC NVAIAA++A
Sbjct: 88 ICASAGQACWAVDAALAGNSGRKTP---FAIGRPPGHHAVPDDAMGFCFANNVAIAAQHA 144
Query: 128 --QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+ + RV IID+DVHHGNGT D F D D+FF+S H+ G YPGTG I+E G GDG
Sbjct: 145 LDHEEYDVDRVAIIDWDVHHGNGTQDIFEDRDDVFFVSVHEQGLYPGTGDIEETGSGDGT 204
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+N+P+P G+ D F I + F PDL+L+SAG+DAH DP++ ++ +T
Sbjct: 205 GTTMNIPMPAGTSDAGYLAAFDGPIATALESFDPDLLLISAGFDAHRHDPISRIRLSTEA 264
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE----PSKASEFDN 301
Y +L ++ LA +L + F LEGGY L+ L+ SV+ F G P +E D
Sbjct: 265 YALLTDRVRTLAGEL-DAPLAFVLEGGYGLDVLADSVSIVHETFDGREPIGPDDDAEIDE 323
>gi|320353627|ref|YP_004194966.1| histone deacetylase superfamily protein [Desulfobulbus propionicus
DSM 2032]
gi|320122129|gb|ADW17675.1| histone deacetylase superfamily [Desulfobulbus propionicus DSM
2032]
Length = 364
Score = 194 bits (492), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 153/262 (58%), Gaps = 10/262 (3%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
F PA V IA H+ E + A+ G T +A +++ +L AAGA
Sbjct: 53 EFGPAPVSAIALNHSD------ELIREVAATAGHAAFYLDADTRTSAASYEAALLAAGAV 106
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
I ++ +A R + GF L+RPPGHHA MGFC+F NVA+ AR+A++ GL+R+
Sbjct: 107 IDGINRLA----RGEIDNGFCLVRPPGHHAERDQAMGFCLFNNVAVGARWARKHLGLERI 162
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG 196
++D+D+HHGNGT +FY DP + + S HQ YPG+G + EVG G G G T+N+PL G
Sbjct: 163 LLLDWDLHHGNGTQHSFYRDPSVLYCSIHQYPCYPGSGAVGEVGEGPGLGYTINVPLCSG 222
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
GD + ++++ P ++P+LILVS G+D DPL +++ T + + +L
Sbjct: 223 HGDAEYARILNQMVAPLVHGYRPELILVSCGFDCMAGDPLGAMRLTATGIASMTRTLVEL 282
Query: 257 AKDLCGSRCVFFLEGGYNLNSL 278
A ++C +R + LEGGY+L+++
Sbjct: 283 AAEVCDNRLLLVLEGGYDLDNV 304
>gi|421866855|ref|ZP_16298517.1| Histone deacetylase 6 [Burkholderia cenocepacia H111]
gi|444362595|ref|ZP_21163101.1| histone deacetylase family protein [Burkholderia cenocepacia BC7]
gi|358073019|emb|CCE49395.1| Histone deacetylase 6 [Burkholderia cenocepacia H111]
gi|443596543|gb|ELT65044.1| histone deacetylase family protein [Burkholderia cenocepacia BC7]
Length = 369
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 149/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++L+ +PA+ D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDLRGAAPATTADLLRIHPAHYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIAAVDAVVGERAAN----AFSLSRPPGHHCLRDRPMGFCMLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G++RV +ID+DVHHGNGT +YDDPD +S HQD + PG D+ G G G G+ LN
Sbjct: 170 GIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGADDRGEGAGIGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P RF+P+LI++++G DA +DPLA +Q T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVDPLARMQLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|448579410|ref|ZP_21644606.1| histone deacetylase [Haloferax larsenii JCM 13917]
gi|445723359|gb|ELZ75002.1| histone deacetylase [Haloferax larsenii JCM 13917]
Length = 336
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 121/320 (37%), Positives = 166/320 (51%), Gaps = 29/320 (9%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG-----PTYATATTFQ 67
+E +PA +A+VH YV G G T A T+
Sbjct: 38 VEYVEAAPAVKSTVAAVHDDDYVDEFHD-----------FCRGGGGNWDPDTVAVEETWV 86
Query: 68 ESLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+LA+AG A A +++ R P F+L RPPGHHA+ MGFC F N A+AA+
Sbjct: 87 AALASAGLAEWAARSALSGDDGRRTP---FSLGRPPGHHAVEDDAMGFCFFNNAAVAAQA 143
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
+RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG++DE G EG
Sbjct: 144 VIDDDLAERVAIFDWDVHHGNGTQDIFYDRDDVFYTSIHEDGLYPGTGEVDETGVDGAEG 203
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+TLN+PL G+GD F E I P +RF PDL +VSAG+DAH DP++ ++ +T Y
Sbjct: 204 TTLNIPLRAGAGDADYVYSFEETIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGY 263
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY 306
ML ++ L D + F LEGGY L++LS VA F G + +
Sbjct: 264 AMLTERVRDLCDD-TDTALSFVLEGGYGLDTLSEGVAIVHETFDGRLAMDPD-------- 314
Query: 307 EEPSAKVKQAIERVKHIHSL 326
E+P K ++ ++ +H L
Sbjct: 315 EDPEQKNIDLVDEIRDVHGL 334
>gi|357383660|ref|YP_004898384.1| acetylspermidine deacetylase [Pelagibacterium halotolerans B2]
gi|351592297|gb|AEQ50634.1| acetylspermidine deacetylase [Pelagibacterium halotolerans B2]
Length = 317
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 151/267 (56%), Gaps = 17/267 (6%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQ--QGIILIEGSGPTYATATTFQESLAAAGAG 76
+P ++ VH+RA + + RA++ +GI I+ T+ +A + + S A G
Sbjct: 48 TPGDLELADLVHSRAVMDTI-----RATRPAEGIGQIDAD--TFVSARSLEASATALGGV 100
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
+ +++V + F L RPPGHHA MGFC+ +AIAAR QR HG +RV
Sbjct: 101 LRGMEAVILGEAHN----AFILARPPGHHAERDRSMGFCLVNTIAIAARQVQRLHGAERV 156
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG 196
I+DFDVHHGNGT D F DDP +F+ S+HQ YPGTG E G G+ +N+PL G
Sbjct: 157 AIVDFDVHHGNGTQDIFADDPSVFYASSHQMPLYPGTGAPRETGVGN----IVNVPLEAG 212
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
SG MR + E I+P F PDLILVSAG+DA DPLA L++ + L + +
Sbjct: 213 SGGAEMRAAYKETILPALDNFAPDLILVSAGFDAERRDPLAQLEWVGADFAWLTGKLMDI 272
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A+ C +R V LEGGY+L L+ V+
Sbjct: 273 AEKRCSNRLVSMLEGGYDLGGLASGVS 299
>gi|448339399|ref|ZP_21528424.1| histone deacetylase superfamily protein [Natrinema pallidum DSM
3751]
gi|445620067|gb|ELY73575.1| histone deacetylase superfamily protein [Natrinema pallidum DSM
3751]
Length = 333
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 116/270 (42%), Positives = 160/270 (59%), Gaps = 9/270 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + +P + D I +VH YV+ E AS G T A +T++ SLA+
Sbjct: 38 VEYVDAAPTTRDRILAVHDEDYVAEFESFC--ASGGG----NWDADTVAVESTWEASLAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + + PP F+L RPPGHHA+ MGFC F NVAIAAR A
Sbjct: 92 AGLAEWAAKTALDRRTERFPP--FSLGRPPGHHAVEDDAMGFCFFNNVAIAARSVIDAGT 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
+RV IID+DVHHGNGT + FYDD +F++S H+DG YPGTG ++E G GDG G+TLN+P
Sbjct: 150 AERVAIIDWDVHHGNGTQEVFYDDGSVFYVSFHEDGLYPGTGFVEETGTGDGTGTTLNVP 209
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G+ + T EV+ P F PDL+LVSAG+DAH DP++ + +T Y +L
Sbjct: 210 FPPGTTEYGYLTAIDEVVGPELLAFDPDLLLVSAGFDAHRYDPISRMSVSTDGYGLLTQQ 269
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
++++A G+ F LEGGY+L++LS S+
Sbjct: 270 VREIAAS-TGAALGFVLEGGYSLDTLSESI 298
>gi|440225753|ref|YP_007332844.1| putative deacetylase [Rhizobium tropici CIAT 899]
gi|440037264|gb|AGB70298.1| putative deacetylase [Rhizobium tropici CIAT 899]
Length = 313
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 150/284 (52%), Gaps = 14/284 (4%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAM-DRASQQGIILIEGSGPT 59
+ + E E ++ + A D + H ++ + ++M D+ I +E T
Sbjct: 30 LNIALEHPNFERLDRRKAPAAHEDAVLLAHPEEHLEFVLRSMPDKGDDSEINQLEAD--T 87
Query: 60 YATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
YA+ T Q + G +A VD V A+ N F RPPGHHA MGFC F
Sbjct: 88 YASPKTLQAIMHGVGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKTKAMGFCFF 141
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKID 177
N AIAAR+AQ+AHG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTGK D
Sbjct: 142 NNAAIAARHAQKAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGKKD 201
Query: 178 EVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
E G + +N PL +G R F I+P F PDLI++SAG+DAH DPLA
Sbjct: 202 ESGT---HNTIVNAPLSPNTGGDHFREAFKSRILPALADFSPDLIIISAGFDAHHRDPLA 258
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
L T + + ++A +R V LEGGY+L L+ S
Sbjct: 259 QLNLTGEDFDWATGRLLEIADRSAKNRVVSLLEGGYDLEGLAES 302
>gi|406913016|gb|EKD52505.1| histone deacetylase family protein [uncultured bacterium]
Length = 306
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 147/268 (54%), Gaps = 10/268 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++++S+H V + +D + + + T++ T + +AG+ IAL
Sbjct: 48 ASFEEVSSIHTEKLV----RLVDESRGKSNTCFDPD--TFSNKHTATAAFLSAGSTIALA 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ V K D GF+ RPPGHHA MGFC F N+AIAA+ H KR+ I+D
Sbjct: 102 EKV--EKGEWDN--GFSFARPPGHHAEHDCVMGFCFFNNIAIAAQQLIEKHHKKRIAIVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT +FYD D+ F S H YPGTG E G G+G ++N PLPG S D
Sbjct: 158 YDVHHGNGTQASFYDRDDVLFCSVHHYPFYPGTGGSFETGASRGKGFSVNAPLPGDSDDD 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ VF +IVP FKP+ ILVSAG+DAH DPL ++ T + + + +LA
Sbjct: 218 DYKKVFDNIIVPAVDSFKPEFILVSAGFDAHERDPLGGMKLTKQGFAFMNKRLIELAYLH 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRA 288
CG + VF LEGGY++ L V F A
Sbjct: 278 CGGKIVFVLEGGYDMQGLQEGVESVFEA 305
>gi|338973401|ref|ZP_08628765.1| acetylspermidine deacetylase [Bradyrhizobiaceae bacterium SG-6C]
gi|338233444|gb|EGP08570.1| acetylspermidine deacetylase [Bradyrhizobiaceae bacterium SG-6C]
Length = 309
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D +A H+ Y+ L A + GI+ ++G T + T++ +L A G +A V
Sbjct: 50 ADLDVVALCHSNEYIDELRHI---APKDGIVYLDGD--TSMSPGTWEAALRATGGAVAAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +K F RPPGHHA PMGFC F + AIAARYAQR +G++R ++D
Sbjct: 105 DAVMKNKRTN----AFVGTRPPGHHAETSKPMGFCFFDSAAIAARYAQRKYGIERACVVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG+ + F+ DP + + STHQ +PGTG E RGD + + +N PL G+G
Sbjct: 161 FDVHHGNGSQEIFWADPTVMYASTHQMPLFPGTGATQE--RGD-QDTVVNAPLRPGNGGR 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F I+P + F P+LI++SAG+DAH DPL SL+ + + + ++A
Sbjct: 218 EFREAFDLAILPRLEAFAPELIVISAGFDAHWRDPLGSLELREEDFAWVTRKLMEIADKS 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY+L L SVA A +
Sbjct: 278 AEGRIVSVLEGGYDLQGLRDSVAVHVAALM 307
>gi|299134747|ref|ZP_07027939.1| histone deacetylase superfamily [Afipia sp. 1NLS2]
gi|298590557|gb|EFI50760.1| histone deacetylase superfamily [Afipia sp. 1NLS2]
Length = 310
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/274 (38%), Positives = 154/274 (56%), Gaps = 15/274 (5%)
Query: 21 ASVDDIASV---HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
A + DI +V H +YV ++ + A +QGI+ I+G T + T++ ++ G
Sbjct: 48 APMGDIETVKLCHDESYV---DEIREMAPKQGIVYIDGD--TMMSPGTWEAAMRGVGGAN 102
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
A VD+V + K + F RP GHHA MGFC+F AIAARYAQ+ HG+ RV
Sbjct: 103 AGVDAVVSGKAQNV----FVGTRPCGHHAERNRAMGFCIFDQAAIAARYAQKKHGIGRVA 158
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
++DFDVHHGNG+ D F+ DP + + STHQ +PGTG E G D + +N P+ G
Sbjct: 159 VVDFDVHHGNGSQDIFWADPTVMYCSTHQMPLFPGTGATQERGEHD---TIVNAPMRPGE 215
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G R F VI+P ++F P+L+++SAG+DAH DPLA++Q + + + +A
Sbjct: 216 GGPKFREAFEGVILPQLEKFSPELVIISAGFDAHWRDPLANIQLDEKDFGWVTKKLMDVA 275
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L L S+ + A +G
Sbjct: 276 DKSAGGRIVSVLEGGYDLQGLHDSIVEHVSALMG 309
>gi|427702267|ref|YP_007045489.1| deacetylase [Cyanobium gracile PCC 6307]
gi|427345435|gb|AFY28148.1| deacetylase, histone deacetylase/acetoin utilization protein
[Cyanobium gracile PCC 6307]
Length = 321
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/237 (40%), Positives = 138/237 (58%), Gaps = 4/237 (1%)
Query: 56 SGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFC 115
+G T + + + + AAG +A V++V + +A++RPPGHHA P MGFC
Sbjct: 85 TGDTAISPHSERTARLAAGGVLAAVEAVMEQRVH----RAYAVVRPPGHHASPARGMGFC 140
Query: 116 VFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGK 175
++ NVA+AAR+ Q HGL+R+ ++D+DVHHGNGT D F+ DP + FLS+HQ YPG+G
Sbjct: 141 IYNNVAVAARHLQAVHGLERILVVDWDVHHGNGTQDIFWSDPSVLFLSSHQAPLYPGSGS 200
Query: 176 IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
E G G G G T N PLP G+ M + E ++P A+ F PD +L+SAG+D+ DP
Sbjct: 201 RQEQGEGPGSGYTRNCPLPAGTSGPEMVAAWREELLPLAEDFAPDFVLISAGFDSRAGDP 260
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
L L+ + L + +A D R V LEGGY+L L+ + A LG+
Sbjct: 261 LGDLRLQDRDFAALTRMLLSIAADHAQGRLVSALEGGYDLEGLASASAAHVACLLGD 317
>gi|91975756|ref|YP_568415.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisB5]
gi|91682212|gb|ABE38514.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisB5]
Length = 370
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 155/284 (54%), Gaps = 13/284 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ DI VH ++S +++ R + I G G T +L +AG I L
Sbjct: 66 PATDADILRVHTEEHLSIIKEISARPTGG----IAGDGVTMLGNGGLDIALLSAGGAIEL 121
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V V A + R G+AL+ PPGHHA MGFC+F N ++AA YA+ GL RV I+
Sbjct: 122 VKQVVAGELRN----GYALVNPPGHHAPRNQAMGFCIFNNTSVAAAYARNVLGLDRVAIV 177
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT-GKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT D ++ DP + +S HQ +P G + E G GDG G LN+PLP GSG
Sbjct: 178 DWDVHHGNGTQDIWWTDPSVLTISIHQHLCFPANMGFVTERGEGDGHGYNLNIPLPPGSG 237
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ A + F V++P + ++P LI+V +G+DA +LDPLA + T + LA + A
Sbjct: 238 NAAYQHAFERVVIPALEAYRPQLIIVGSGFDASILDPLARMMVTAAGFRKLARMVIDCAD 297
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
+CG + EGGY+ + L + A + E ++ D+P
Sbjct: 298 RICGGKIACVQEGGYSPHYLPF----CGLAVIEELAEVRLLDDP 337
>gi|307941535|ref|ZP_07656890.1| type-2 histone deacetylase 1 [Roseibium sp. TrichSKD4]
gi|307775143|gb|EFO34349.1| type-2 histone deacetylase 1 [Roseibium sp. TrichSKD4]
Length = 309
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 148/280 (52%), Gaps = 20/280 (7%)
Query: 12 IIELKNFSP--------ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
I+E + F P ++DIA H +Y+ L + A ++G+ ++ T +
Sbjct: 33 ILEHEKFQPLERDIAQIGRIEDIARAHPMSYIDDLH---NLAPEEGLARVDAD--TTLSP 87
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
+++ L GA VD V + K F+ RPPGHHA MGFC F N A+A
Sbjct: 88 GSWEAILRGTGAACQAVDEVVSKKVNN----AFSASRPPGHHAEKDRSMGFCFFNNAAVA 143
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
ARYAQ +GL RV IIDFDVHHGNGT D F++DP + + STHQ YPG+G +E G +
Sbjct: 144 ARYAQNVYGLDRVAIIDFDVHHGNGTQDIFWNDPTVMYCSTHQMPLYPGSGAANETGEAN 203
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
+ +N PL G T + VI+P + F P+L+++SAG+DAH DPL L
Sbjct: 204 ---TIVNAPLSAGDDGTIFKEAMETVILPRLETFSPELVIISAGFDAHYRDPLGGLNLVE 260
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ + +A C R V LEGGY+L L+ SVA
Sbjct: 261 ADFAWATRALMDIADKSCDGRVVSLLEGGYDLEGLARSVA 300
>gi|195478791|ref|XP_002100654.1| GE17180 [Drosophila yakuba]
gi|194188178|gb|EDX01762.1| GE17180 [Drosophila yakuba]
Length = 1136
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 170/319 (53%), Gaps = 19/319 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQ--GIILIEGSGPTYATATTFQESL 70
++L + A+ D++ H RA+V+ + + + R + G I S Y TF +
Sbjct: 585 MKLLSARAATTDEVCLAHTRAHVNTVRRLLGREPEDLYGAAAIYNS--VYLHPRTFDCAT 642
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG+ + VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA R
Sbjct: 643 LAAGSVLQAVDSVLRGESRS----GICNVRPPGHHAEQDQPHGFCIFNNVAIAAQYAIRD 698
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPG--TGKIDEVGRGDGE 185
GL+RV I+D+DVHHGNGT F +P + ++S H+ +P G D VG+G G
Sbjct: 699 FGLERVLIVDWDVHHGNGTQHIFESNPKVLYISLHRYEHGAFFPKGPDGNFDVVGKGAGR 758
Query: 186 GSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL + T
Sbjct: 759 GFNVNIPWNKKGMGDLEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPE 818
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
Y ML + LA R + LEGGYN+NS+SY++ + LG+P + A
Sbjct: 819 GYGMLTHWLSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQL-GAAA 873
Query: 305 LYEEPSAKVKQAIERVKHI 323
L + P+ + +E ++
Sbjct: 874 LQKPPTVAYQSCVESLQQC 892
Score = 167 bits (424), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 164/302 (54%), Gaps = 17/302 (5%)
Query: 1 MELTSEFRGSE-IIELKNFSPASVDDIASVHARAYVSGLE-KAMDRASQQGIILIEGSGP 58
+E E +E +EL + S A+ D+I +H + L+ A R ++ L
Sbjct: 145 LERCRELNLAERCLELPSRS-ATKDEILRLHTEEHFERLKATAGIRDDERMEELSSRYDS 203
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF+ SL A+G+ I LVD + A K G A+IRPPGHHA+ G+C F
Sbjct: 204 IYIHPSTFELSLLASGSTIELVDHLIAGKAHN----GMAIIRPPGHHAMKAEFNGYCFFN 259
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+AA++A H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 260 NVALAAQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHE 319
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G + +F ++++P A F+P+LI+VSAGYDA +
Sbjct: 320 SDYHAIGSGAGTGYNFNVPLNATGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAAL 379
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y L + +LA +R LEGGY L+SL+ A + R+ LG+
Sbjct: 380 GCPEGEMEVTPACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGD 435
Query: 293 PS 294
P
Sbjct: 436 PC 437
>gi|319784714|ref|YP_004144190.1| histone deacetylase superfamily protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
gi|317170602|gb|ADV14140.1| histone deacetylase superfamily [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 308
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 137/236 (58%), Gaps = 10/236 (4%)
Query: 48 QGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAI 107
+GI I+ T A+ ++Q ++ A GA A VD V + R D F RPPGHHA
Sbjct: 74 EGIARIDAD--TTASPKSWQAAITAIGAANAAVDDVFS--GRADNV--FVAARPPGHHAE 127
Query: 108 PKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD 167
MGFC+F AIAARYAQ+ HG++RV I+D+DVHHGNGT D F+DDP + + STHQ
Sbjct: 128 KTTAMGFCLFNTAAIAARYAQKKHGVERVAIVDWDVHHGNGTQDIFWDDPSVLYCSTHQM 187
Query: 168 GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAG 227
YPGTG E G G+ +N PL +G R F ++P F PDLI++SAG
Sbjct: 188 PLYPGTGAKTET----GAGNIVNAPLAPQTGSEVFRDAFLSRVLPALDNFAPDLIIISAG 243
Query: 228 YDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+DAH DPLA + T + + Q A G+R V LEGGY+L L++SVA
Sbjct: 244 FDAHHRDPLAEINLTEDDFDWATGQLMQRAARHSGNRLVSLLEGGYDLQGLAFSVA 299
>gi|85711863|ref|ZP_01042918.1| Histone deacetylase/AcuC/AphA family protein [Idiomarina baltica
OS145]
gi|85694260|gb|EAQ32203.1| Histone deacetylase/AcuC/AphA family protein [Idiomarina baltica
OS145]
Length = 309
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 149/280 (53%), Gaps = 15/280 (5%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ + SPA+++ I H+ Y+S L + + +G + ++ P T T +L
Sbjct: 42 VLTREQASPATLEHIKLAHSDKYISELYR---KQPHEGHVWLDPDTPM--TPDTLDSALH 96
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A GA +A VD V A +N+ F L+RPPGHHA MGFCVF N+AIAA YAQ+A+
Sbjct: 97 AVGANVAAVDKVLADQNKQ----AFCLVRPPGHHATKNQAMGFCVFNNIAIAALYAQQAY 152
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
GL RV I+DFDVHHGNGT D P+I F ST Q YP V + + L++
Sbjct: 153 GLSRVAIVDFDVHHGNGTEDIVQAHPNILFCSTFQSQLYP------YVDENNNDDHILSI 206
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
LP G R + I+P FKP LIL+SAG+D H+ D ++ Y+ +
Sbjct: 207 ALPPGCKSLDWREAVYYQILPKLDAFKPQLILISAGFDGHIEDEMSQFLLKEDDYFWITQ 266
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+K +A C R V LEGGY+ ++L SV + LG
Sbjct: 267 KLKLIADKHCSGRIVSSLEGGYDHSALGRSVVAHLKGMLG 306
>gi|384220817|ref|YP_005611983.1| hypothetical protein BJ6T_71470 [Bradyrhizobium japonicum USDA 6]
gi|354959716|dbj|BAL12395.1| hypothetical protein BJ6T_71470 [Bradyrhizobium japonicum USDA 6]
Length = 309
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 151/277 (54%), Gaps = 13/277 (4%)
Query: 16 KNFSP-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG 74
++ +P +D + H YV+ L A G + I+G T + T++ + G
Sbjct: 44 RDLAPEGDLDLVTLCHNEHYVTELRHI---APTSGQVYIDGD--TSMSPGTWEAVMRGVG 98
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+A ++V ++R F +RPPGHHA PMGFC F N AIAAR+AQR +G++
Sbjct: 99 GAVAATEAVMNGEHRN----AFVAVRPPGHHAEIGKPMGFCFFDNAAIAARHAQRKYGIQ 154
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
R IIDFDVHHGNGT D F+ DP + + STHQ +PGTG E RGD + + +N PL
Sbjct: 155 RAAIIDFDVHHGNGTQDIFWSDPTVMYCSTHQMPLFPGTGAKGE--RGDHD-TIVNAPLA 211
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G R F +I+P ++F P+L+++SAG+DAH DPLASL Y + +
Sbjct: 212 SEDGGPEFRAAFEHLILPRLEKFSPELLVISAGFDAHYRDPLASLNLRAEDYTWVTRKLM 271
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
LA G R V LEGGY+L L SV A +G
Sbjct: 272 DLADKSAGGRIVSVLEGGYDLQGLKESVMAHVGALMG 308
>gi|448354802|ref|ZP_21543557.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
gi|445637133|gb|ELY90289.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
Length = 344
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/321 (38%), Positives = 173/321 (53%), Gaps = 27/321 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P ++DIA+VH RAY+ +++ + T A T+ A+
Sbjct: 38 VEYVEADPCPIEDIAAVHDRAYIDSVKEFCEDGGGNW------DPDTTAVEATWDAICAS 91
Query: 73 AGAGIALVDS-VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--QR 129
AG VD+ +A R P FA+ RPPGHHA+P MGFC NVAIAA++A
Sbjct: 92 AGQACWAVDAALAGDSGRKTP---FAIGRPPGHHAVPDDAMGFCFANNVAIAAQHALDHD 148
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
+ + RV I D+DVHHGNGT D F D D+FF+S H+ G YPGTG ++E G GDG G+T+
Sbjct: 149 EYDVDRVAIFDWDVHHGNGTQDIFDDGDDVFFVSIHEQGLYPGTGDVEETGTGDGAGTTM 208
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+P+P G+ D F + + F PDL+L+SAG+DAH DP++ ++ +T Y +L
Sbjct: 209 NIPMPAGTSDAGYLAAFDGPVATALESFDPDLLLISAGFDAHRHDPISRIRLSTEAYALL 268
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE----PSKASEFDNPAIL 305
++ LA +L G+ F LEGGY L+ L+ SV+ F G P +E D
Sbjct: 269 TDRVRTLAGEL-GAPLAFVLEGGYGLDVLADSVSIVHETFDGREPIGPDDDAEIDE---- 323
Query: 306 YEEPSAKVKQAIERVKHIHSL 326
V+ A+E V H L
Sbjct: 324 ------AVEAALEAVLEEHEL 338
>gi|414171844|ref|ZP_11426755.1| hypothetical protein HMPREF9695_00401 [Afipia broomeae ATCC 49717]
gi|410893519|gb|EKS41309.1| hypothetical protein HMPREF9695_00401 [Afipia broomeae ATCC 49717]
Length = 309
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D +A H+ Y+ L + ++G+I ++G T + T++ +L A G +A V
Sbjct: 50 ADLDVVALCHSNEYIDELRHI---SPKEGMIYLDGD--TTMSPGTWEAALRATGGAVAAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +K F RPPGHHA PMGFC F + AIAARYAQR +G+ R ++D
Sbjct: 105 DAVMKNKRTN----AFVGTRPPGHHAETSRPMGFCFFDSAAIAARYAQRKYGIARACVVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG+ + F+ DP + + STHQ +PGTG E RGD + + +N PL G+G
Sbjct: 161 FDVHHGNGSQEIFWSDPSVMYASTHQMPLFPGTGATQE--RGD-QDTVVNAPLRPGNGSR 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F I+P + F P+LI++SAG+DAH DPL SL+ + + + ++A
Sbjct: 218 EFREAFDIAILPRLEAFAPELIVISAGFDAHWRDPLGSLELREEDFAWVTRKLMEIADKS 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY+L L SVA A +
Sbjct: 278 AEGRIVSVLEGGYDLQGLRDSVAVHVAALM 307
>gi|420240098|ref|ZP_14744359.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
gi|398077660|gb|EJL68627.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF080]
Length = 310
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 145/269 (53%), Gaps = 11/269 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++ K+ A+ D + H ++ + + + + I IE TY +FQ +L
Sbjct: 42 LDRKDAPQANEDAVLLAHPEEHLRAVMREI--PEEDTIRQIEAD--TYVGPKSFQAALTG 97
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G +A VD VA K F RPPGHHA MGFC+F N AIAAR+AQR +G
Sbjct: 98 IGGAMAAVDDVATGKVDN----AFVAARPPGHHAEKDKAMGFCLFNNAAIAARHAQRKYG 153
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
++RV I+D+DVHHGNGT D F++DP + F STHQ YPGTG DE G + + +N P
Sbjct: 154 MERVAIVDWDVHHGNGTQDIFWNDPSVLFCSTHQMPLYPGTGAKDETGT---KNNVVNAP 210
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L +G R F ++P F+PD I++SAG+DAH DPLA + +
Sbjct: 211 LSPDTGSEYFREAFKSRVLPALDNFRPDFIIISAGFDAHHRDPLAQINLVGDDFDWATGR 270
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ ++A G R V LEGGY+L L+ S
Sbjct: 271 VMEIAGKYAGHRIVSLLEGGYDLEGLAES 299
>gi|416927278|ref|ZP_11933159.1| histone deacetylase superfamily protein [Burkholderia sp. TJI49]
gi|325526237|gb|EGD03861.1| histone deacetylase superfamily protein [Burkholderia sp. TJI49]
Length = 369
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 148/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ PA+ D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDMRGAEPATAVDLLRIHPAHYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIAAVDAVVGERAAN----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G++RV +ID+DVHHGNGT +YDDPD +S HQD + PG D+ G G G G+ LN
Sbjct: 170 GIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGADDRGEGAGVGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P RF+P+LI+V++G DA +DPLA +Q T +Y +
Sbjct: 230 VPLLAGSGDDAYRHAFERIVLPALDRFRPELIVVASGLDASAVDPLARMQLYTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RALKEAAQRHCGGRLVIVHEGGYS 313
>gi|427403231|ref|ZP_18894228.1| hypothetical protein HMPREF9710_03824 [Massilia timonae CCUG 45783]
gi|425717967|gb|EKU80921.1| hypothetical protein HMPREF9710_03824 [Massilia timonae CCUG 45783]
Length = 310
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/267 (39%), Positives = 147/267 (55%), Gaps = 11/267 (4%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D + VH YV + A R+ G++ ++G G T + +++ + GA A VD+V
Sbjct: 53 DQVLLVHGEEYVDAIAAAAPRS---GLVALDG-GDTLMSPGSWEAVMRCVGAACAGVDAV 108
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
A + F RP GHHA P+ MGFC+F AIAA +A HGL+RV ++DFDV
Sbjct: 109 VAGEAANV----FCATRPCGHHAEPERAMGFCIFNQAAIAAVHALETHGLQRVAVVDFDV 164
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT AF+ P +FF S+HQ YPGTG E G G+ +NLPLP G G R
Sbjct: 165 HHGNGTQAAFFHRPQLFFGSSHQSPLYPGTGAAGETG---ASGNIVNLPLPPGCGSALFR 221
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+ ++P +RF P LI++SAG+DAH DPLAS+ + + + +A ++C
Sbjct: 222 STVASGLLPALRRFAPQLIVMSAGFDAHRSDPLASMALEDEDFAWITREVMAIAAEVCEG 281
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY++ L A RA L
Sbjct: 282 RIVSILEGGYSVEGLQGGSAAHVRALL 308
>gi|418055614|ref|ZP_12693668.1| histone deacetylase superfamily [Hyphomicrobium denitrificans
1NES1]
gi|353209892|gb|EHB75294.1| histone deacetylase superfamily [Hyphomicrobium denitrificans
1NES1]
Length = 314
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 153/286 (53%), Gaps = 29/286 (10%)
Query: 5 SEFRGSEIIELKNFSPASVDD---IASVHARAYVSGLEKAMDRASQQGIILIEG----SG 57
SE R E +P DD IA H + YV +A+ R S+Q + EG G
Sbjct: 40 SELRRRE-------APLRADDTDYIALAHRKDYV----QALSRLSEQ---ITEGYRHIDG 85
Query: 58 PTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
T + T++ + A GAG+ VD V R D F +RPPGHHA MGFC+F
Sbjct: 86 DTVVSPGTWEAARRAVGAGLDAVDQVV----RGDASNAFCQVRPPGHHAETNHAMGFCLF 141
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKID 177
N+AIAA YA+ HGL+RV ++DFDVHHGNGT + F+ D ++F+ STHQ +PGTG +
Sbjct: 142 NNIAIAAHYARAKHGLERVAVVDFDVHHGNGTQEIFWSDKNLFYGSTHQMPLFPGTGALQ 201
Query: 178 EVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
E G G+ N PL G G F + I+ F PD++L+SAG+DAH DPL
Sbjct: 202 ET----GVGNIFNAPLRAGDGREHFEEAFRDRILGPLHNFAPDMVLISAGFDAHRRDPLG 257
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
L+ + + ++A+ R V LEGGY+L L+ SVA
Sbjct: 258 GLELVEDDFRWATEAVAEVARRHANGRIVSMLEGGYDLKGLAQSVA 303
>gi|282162754|ref|YP_003355139.1| putative histone deacetylase [Methanocella paludicola SANAE]
gi|282155068|dbj|BAI60156.1| putative histone deacetylase [Methanocella paludicola SANAE]
Length = 326
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/310 (38%), Positives = 165/310 (53%), Gaps = 35/310 (11%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E + PASV ++ +VHA YV IL G G TY + +
Sbjct: 37 LEFREPRPASVPELEAVHAPWYVRN-------------ILGHGRGRLDLDTYMSEGSAMA 83
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L AAGA + VD + ++ L ++RPPGHHA+P MGFC+F N A+ A +A
Sbjct: 84 ALKAAGAAVEAVDLALSGQS-----LAAGMVRPPGHHALPAQAMGFCLFNNAAVGAAHAL 138
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ +K+V I+D+DVHHGNGT FY PD+ + S HQ +PGTG D+ G GDGEG
Sbjct: 139 KK--VKKVLIVDWDVHHGNGTELMFYGRPDVLYFSVHQYPHFPGTGAADDTGTGDGEGYN 196
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PLP GSGD F ++VP ++P+L++VSAGYD H DPL ++ T +
Sbjct: 197 VNVPLPAGSGDADYVHAFESILVPVMDAYRPELVIVSAGYDPHEADPLGDMRMTAPGFGA 256
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
LA+ IK + V LEGGY+L L V S R F GE D+ I E
Sbjct: 257 LASLIKTAGS----ANVVMLLEGGYSLKYLPLCVEASLRGFAGE-------DHGRISGER 305
Query: 309 PSAKVKQAIE 318
+A ++ +E
Sbjct: 306 TAAATERIVE 315
>gi|414170520|ref|ZP_11426074.1| hypothetical protein HMPREF9696_03929 [Afipia clevelandensis ATCC
49720]
gi|410884298|gb|EKS32126.1| hypothetical protein HMPREF9696_03929 [Afipia clevelandensis ATCC
49720]
Length = 309
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D +A H+ Y+ L A + G++ ++G T + T++ +L A G +A V
Sbjct: 50 ADLDVVALCHSNEYIDELRHI---APKDGMVYLDGD--TSMSPGTWEAALRATGGAVAAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +K F RPPGHHA PMGFC F + AIAARYAQR +G++R ++D
Sbjct: 105 DAVMKNKRTN----AFVGTRPPGHHAETSKPMGFCFFDSAAIAARYAQRKYGIERACVVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG+ + F+ DP + + STHQ +PGTG E RGD + + +N PL G+G
Sbjct: 161 FDVHHGNGSQEIFWADPTVMYASTHQMPLFPGTGATQE--RGD-QDTVVNAPLRPGNGGR 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F I+P + F P+LI++SAG+DAH DPL SL+ + + + ++A
Sbjct: 218 EFREAFDLAILPRLEAFAPELIVISAGFDAHWRDPLGSLELREEDFAWVTRKLMEIADKS 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY+L L SVA A +
Sbjct: 278 AEGRIVSVLEGGYDLQGLRDSVAVHVAALM 307
>gi|209548176|ref|YP_002280093.1| histone deacetylase superfamily protein [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|424915242|ref|ZP_18338606.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WSM597]
gi|209533932|gb|ACI53867.1| histone deacetylase superfamily [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392851418|gb|EJB03939.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WSM597]
Length = 311
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 147/277 (53%), Gaps = 22/277 (7%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAM----DRASQQGIILIEGSGPTYATATTF 66
E +E + AS D + H +++ + + + DR +Q TYA+ +
Sbjct: 40 ERLERRQAPEASEDAVLLAHPEEHLTAVMREIPDEEDRINQL-------EADTYASQKSL 92
Query: 67 QESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
Q +L G +A VD V A+ N F RPPGHHA MGFC F N AIAA
Sbjct: 93 QAALTGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKMTAMGFCFFNNAAIAA 146
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
R+AQ+ HG +RV IID+DVHHGNGT D F+DDP + F STHQ YPG+G DE G+
Sbjct: 147 RHAQKRHGAERVAIIDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGSGAKDEKGK--- 203
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+ +N PL G R F ++P F+PDLI++SAG+DAH DPLA + T
Sbjct: 204 HNTIVNAPLSPNVGSDHFREAFKSRVLPAVADFRPDLIIISAGFDAHHRDPLAQINLTGE 263
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + +LA +R V LEGGY+L L+ S
Sbjct: 264 DFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|398350485|ref|YP_006395949.1| hypothetical protein USDA257_c05970 [Sinorhizobium fredii USDA 257]
gi|390125811|gb|AFL49192.1| uncharacterized protein USDA257_c05970 [Sinorhizobium fredii USDA
257]
Length = 309
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/225 (42%), Positives = 131/225 (58%), Gaps = 7/225 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ ++F+ +L G +A +D+V + F RPPGHHA MGFC F
Sbjct: 83 TYASPSSFEAALTGIGGAVAAIDAVFVG----EADNAFVAARPPGHHAEKNKAMGFCFFN 138
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
+AIAARYAQ+AHG++RV I+D+DVHHGNGT D F++DP + F STHQ YPGTG +E
Sbjct: 139 TIAIAARYAQKAHGVERVAIVDWDVHHGNGTQDIFWNDPSVLFCSTHQMPLYPGTGAKEE 198
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + + +N PL SG R F ++ F+PDL+L+SAG+DAH DPLA
Sbjct: 199 TGV---KHNIVNAPLSPNSGSEHFRDAFRTRVLSALDNFRPDLVLISAGFDAHYRDPLAQ 255
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ + + + A G+R V LEGGY+L L+ S A
Sbjct: 256 INLVAEDFDWATGRLMEAAGKSAGNRVVSMLEGGYDLQGLAESAA 300
>gi|195163866|ref|XP_002022770.1| GL14573 [Drosophila persimilis]
gi|194104793|gb|EDW26836.1| GL14573 [Drosophila persimilis]
Length = 1095
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 157/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D+I H+R++V+ + + + R + Y TF + AAG+ + V
Sbjct: 560 ATTDEICLAHSRSHVNTMRRVLGRDKEDLQAQAATYNSVYLHPATFGCATLAAGSVLQAV 619
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV ++R +RPPGHHA P P GFC+F NVAIAA+YA R GLKRV I+D
Sbjct: 620 DSVLRGESRS----AICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIREFGLKRVLILD 675
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +P + ++S H ++G+ +P G D VG+ G G +N+P
Sbjct: 676 WDVHHGNGTQHIFESNPKVLYISVHRYENGTFFPKGPDGNYDVVGKHTGAGFNVNIPWNK 735
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++++P A F+P+L+LVSAG+DA + DPL + + Y + +
Sbjct: 736 KGMGDLEYALAFQQIVMPIAYEFQPELVLVSAGFDAAIGDPLGGCKVSPEGYGLFTHWLS 795
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA G R V LEGGYN+NS+SY++ + LG+P
Sbjct: 796 ALA----GGRIVVCLEGGYNVNSISYAMTMCTKTLLGDP 830
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 150/281 (53%), Gaps = 15/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ +I +H + LE+ + Q + + Y +TFQ SL A+G+ I L
Sbjct: 130 ATKQEILRLHTAQHFELLEQTSEVCDDQSMEELSSRFDSIYIHPSTFQCSLLASGSTIDL 189
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VDS+ K + G A+IRPPGHHA+ G+C F NVA+AA++A H L+R+ I+
Sbjct: 190 VDSIITGKAQN----GMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHALDVHKLERILIL 245
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKID--EVGRGDGEGSTLNLPL- 193
D+DVHHG GT FY+DP + + S H+ +P + D +G G G G N+PL
Sbjct: 246 DYDVHHGQGTQRFFYNDPRVLYFSIHRFEHGAFWPHLQESDYHAIGEGPGLGFNFNVPLN 305
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G GD +F ++++P A ++P+LI+VSAGYDA + P +Q T Y L +
Sbjct: 306 ETGMGDGDYMAIFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMQVTPAFYAHLLNPL 365
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+LA SR LEGGY L SL+ A + R L +P
Sbjct: 366 LRLAD----SRVAVVLEGGYCLESLAEGAALTMRTLLSDPC 402
>gi|222085099|ref|YP_002543629.1| deacetylase [Agrobacterium radiobacter K84]
gi|398382391|ref|ZP_10540479.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. AP16]
gi|221722547|gb|ACM25703.1| deacetylase protein [Agrobacterium radiobacter K84]
gi|397717556|gb|EJK78172.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. AP16]
Length = 313
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 149/272 (54%), Gaps = 14/272 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAM-DRASQQGIILIEGSGPTYATATTFQESLA 71
++ + PA D + H+ ++ + ++M D+ + I +E TYA+ T Q +
Sbjct: 42 LDRRKAPPAHEDAMLLAHSEEHLEFVLRSMPDKGDEGEINQLEAD--TYASPKTLQAIMH 99
Query: 72 AAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
G +A VD V A+ N F RPPGHHA MGFC F N AIAAR+AQ+
Sbjct: 100 GVGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKNKAMGFCFFNNAAIAARHAQK 153
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
A+G +RV I+D+DVHHGNGT D F+DDP + F STHQ YPG+GK D+ G + +
Sbjct: 154 AYGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGSGKKDDRG---AHNTIV 210
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N PL +G R F ++P F+PDLI++SAG+DAH DPLA L T +
Sbjct: 211 NAPLSPNTGGDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQLNLTGEDFDWA 270
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
I + A +R V LEGGY+L L+ S
Sbjct: 271 TGRILEAADRSAKNRVVSLLEGGYDLEGLAES 302
>gi|323136680|ref|ZP_08071761.1| histone deacetylase superfamily [Methylocystis sp. ATCC 49242]
gi|322397997|gb|EFY00518.1| histone deacetylase superfamily [Methylocystis sp. ATCC 49242]
Length = 294
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 151/271 (55%), Gaps = 12/271 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS+D I VH +AYVS LE+A A ++G ++ T T + AAG +A V
Sbjct: 35 ASLDAILRVHPQAYVSALEEA---APREGYAALDSD--TLMCPKTMEAIWRAAGGAVAAV 89
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + F RPPGHHA + PMGFC NVA+AAR+AQ A+G +RV I+D
Sbjct: 90 DEVMSGA----ADTAFVAARPPGHHASARNPMGFCFVNNVAVAARHAQTAYGAERVAIVD 145
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F+ D + F STHQ YPGTG +E G G+ +N PL GS
Sbjct: 146 FDVHHGNGTQDIFWSDNSVLFCSTHQAPFYPGTGGRNETGE---HGTIVNAPLFAGSTGD 202
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A + I+P + F PDLIL+SAG+DAH DPL L+ + + +A
Sbjct: 203 AFHEALADRILPRLRDFAPDLILISAGFDAHERDPLGGLRLKERDFGEATKRLLDVADKS 262
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
CG R V LEGGY+L +LS SV+ A +G
Sbjct: 263 CGGRLVSLLEGGYDLEALSGSVSAHVLALMG 293
>gi|170738737|ref|YP_001767392.1| histone deacetylase superfamily protein [Methylobacterium sp. 4-46]
gi|168193011|gb|ACA14958.1| histone deacetylase superfamily [Methylobacterium sp. 4-46]
Length = 309
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 147/262 (56%), Gaps = 12/262 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H YV+ + +A R +G++ I+ T + T + L + GA + VD V + K
Sbjct: 59 HPEEYVAAIAEASPR---EGLVAIDSD--TVMSPGTLEAVLRSLGAAVQAVDEVMSGKV- 112
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
FA +RPPGHHA + MGFC F A+AAR+A++A+G +RV ++D+DVHHGNG+
Sbjct: 113 ---ANAFAAMRPPGHHAERRRAMGFCFFNQAAVAARHARKAYGAERVALVDWDVHHGNGS 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D F+ D + + STHQ YPGTG E RGD + + +N PL G R F
Sbjct: 170 QDIFWRDKSVLYCSTHQMPLYPGTGATSE--RGDHD-TIVNAPLRPGDDGERFREAFETA 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
I+P F PDLI++SAG+DAH DPLA+LQ T + + LA G R V L
Sbjct: 227 ILPRIDAFHPDLIVISAGFDAHWRDPLANLQLTEADFAWTTRRLMDLADRHAGGRVVSVL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLG 291
EGGY+L+ LS SVA A +G
Sbjct: 287 EGGYDLDGLSRSVAAHVEALMG 308
>gi|352106917|ref|ZP_08961677.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
gi|350597513|gb|EHA13648.1| histone deacetylase superfamily protein [Halomonas sp. HAL1]
Length = 364
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 111/270 (41%), Positives = 159/270 (58%), Gaps = 13/270 (4%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E ++++ A+ + +A VH +Y+S D S +G T + + +
Sbjct: 65 EGLKIEGGKAATHEQLARVHTTSYLS------DIFSLRGKNAWLDVDTTAVSPGSVDAAE 118
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG IA V++V + + FAL+RPPGHHA P GFC+F NVA+AA +A+ A
Sbjct: 119 VAAGTAIAAVEAVMEKRTKS----AFALVRPPGHHAEPVRARGFCLFNNVAVAAAHARSA 174
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTL 189
G +RV I+D+D HHGNGT D F+ +PD+ F H+ YPG+G ++EVG G EG+T+
Sbjct: 175 LGCERVLIVDWDAHHGNGTQDIFWAEPDVMFFDIHRAAPFYPGSGHLEEVGAGLAEGTTI 234
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP G+GD A F +++ P A FKPD+ILVSAG+D H D +L + + L
Sbjct: 235 NVPLPAGAGDEAYLKAFRDILAPAAAWFKPDIILVSAGFDPHWHD--LALNVSYEGFGAL 292
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
++QLA+ C R VF LEGGYNL SL+
Sbjct: 293 TGFMQQLAEQHCDGRLVFVLEGGYNLESLA 322
>gi|198470023|ref|XP_001355195.2| GA19406 [Drosophila pseudoobscura pseudoobscura]
gi|198147145|gb|EAL32252.2| GA19406 [Drosophila pseudoobscura pseudoobscura]
Length = 1095
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 157/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D+I H+R++V+ + + + R + Y TF + AAG+ + V
Sbjct: 560 ATTDEICLAHSRSHVNTMRRVLGRDKEDLQAQAATYNSVYLHPATFGCATLAAGSVLQAV 619
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV ++R +RPPGHHA P P GFC+F NVAIAA+YA R GLKRV I+D
Sbjct: 620 DSVLRGESRS----AICNVRPPGHHAEPDQPHGFCIFNNVAIAAQYAIREFGLKRVLILD 675
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +P + ++S H ++G+ +P G D VG+ G G +N+P
Sbjct: 676 WDVHHGNGTQHIFESNPKVLYISVHRYENGTFFPKGPDGNYDVVGKHTGAGFNVNIPWNK 735
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++++P A F+P+L+LVSAG+DA + DPL + + Y + +
Sbjct: 736 KGMGDLEYALAFQQIVMPIAYEFQPELVLVSAGFDAAIGDPLGGCKVSPEGYGLFTHWLS 795
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA G R + LEGGYN+NS+SY++ + LG+P
Sbjct: 796 ALA----GGRIIVCLEGGYNVNSISYAMTMCTKTLLGDP 830
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 151/281 (53%), Gaps = 15/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ +I +H + LE+ + Q + + Y +TFQ SL A+G+ I L
Sbjct: 130 ATKQEILRLHTAQHFELLEQTSEVCDDQSMEELSSRFDSIYIHPSTFQCSLLASGSTIDL 189
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VDS+ K + G A+IRPPGHHA+ G+C F NVA+AA++A H L+R+ I+
Sbjct: 190 VDSIITGKAQN----GMAIIRPPGHHAMKAEFNGYCFFNNVALAAQHALDVHKLERILIL 245
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKID--EVGRGDGEGSTLNLPL- 193
D+DVHHG GT FY+DP + + S H+ +P + D +G G G G N+PL
Sbjct: 246 DYDVHHGQGTQRFFYNDPRVLYFSIHRFEHGAFWPHLQESDYHAIGEGPGLGFNFNVPLN 305
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G GD +F ++++P A ++P+LI+VSAGYDA + P +Q T Y L +
Sbjct: 306 ETGMGDGDYMAIFQQLLLPVAMEYQPELIIVSAGYDAALGCPEGEMQVTPAFYAHLLNPL 365
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+LA SR LEGGY L SL+ A + R LG+P
Sbjct: 366 LRLAD----SRVAVVLEGGYCLESLAEGAALTMRTLLGDPC 402
>gi|399039193|ref|ZP_10734842.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF122]
gi|398062879|gb|EJL54644.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF122]
Length = 311
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 128/223 (57%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ +F+ +L G +A VD V K F RPPGHHA MGFC F
Sbjct: 85 TYASRKSFEAALTGIGGAMAAVDDVFTGKADN----VFVAARPPGHHAEKSRAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQ+ HG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 141 NAAIAARHAQKVHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G+ G+ +N PL G R F ++P F+PDLI++SAG+DAH DPLA
Sbjct: 201 SGK---HGTIVNAPLSPNVGSDHFREAFKSRVLPALFDFRPDLIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + ++A G+R V LEGGY+L L+ S
Sbjct: 258 INLVGEDFDWATGRLLEVADKSAGNRVVSLLEGGYDLEGLAES 300
>gi|282890404|ref|ZP_06298932.1| hypothetical protein pah_c016o146 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499786|gb|EFB42077.1| hypothetical protein pah_c016o146 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 336
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/263 (38%), Positives = 148/263 (56%), Gaps = 7/263 (2%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +DI H Y ++ + A G + +G +F +L A G + V
Sbjct: 69 ATKEDILLCHKEDYYHLVQNEVKFAESNGSSTL-STGDVNICPQSFDVALLAVGGVLTAV 127
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ-RAHGLKRVFII 139
D+V + + F ++RPPGHHA GFC+F NVAI ARYAQ R +K+V I+
Sbjct: 128 DAVLNKEAQN----AFCIVRPPGHHAKKAQGKGFCLFNNVAIGARYAQKRVPSIKKVLIV 183
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG-SG 198
D+D+HHG+GT D F +DP +F+ STH+ G YPGTG ++G+ G+ LN P+ GG +
Sbjct: 184 DWDLHHGDGTQDIFEEDPSVFYFSTHEQGIYPGTGDNQDIGKEQAAGTMLNCPIKGGENA 243
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ F++ ++P + F PDL+++SAG+DAH LDPL + T + L KQ+A
Sbjct: 244 RFEILKAFYKKLIPAMESFAPDLVMISAGFDAHYLDPLGNFNLTEIDFAELTKLTKQIAH 303
Query: 259 DLCGSRCVFFLEGGYNLNSLSYS 281
SR + LEGGY+L +LS S
Sbjct: 304 QYAESRIISVLEGGYHLEALSRS 326
>gi|357405061|ref|YP_004916985.1| hypothetical protein MEALZ_1704 [Methylomicrobium alcaliphilum 20Z]
gi|351717726|emb|CCE23391.1| conserved protein of unknown function [Methylomicrobium
alcaliphilum 20Z]
Length = 315
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 126/197 (63%), Gaps = 4/197 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F +RPPGHHA P PMGFC+F N+AIAA YA+ + L ++ IIDFDVHHGNGT AFY
Sbjct: 117 AFCAVRPPGHHAEPDRPMGFCLFNNIAIAAEYARLHYSLGKIAIIDFDVHHGNGTQAAFY 176
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
P I + S+H+ YPGTG E G G+ +N+PL GS R ++ +I+P
Sbjct: 177 KQPQILYASSHEMPHYPGTGHPKETGVGN----IVNVPLHPGSSSDEFRQLYSSIILPAV 232
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
Q FKPDLIL+SAG+DAH DPLA ++ +T Y + +IK +A++ R + LEGGY+
Sbjct: 233 QNFKPDLILISAGFDAHQNDPLAGIRLSTEDYQWVTEHIKAIAEESAKGRVLSVLEGGYH 292
Query: 275 LNSLSYSVADSFRAFLG 291
+ +L+ SVA ++ +
Sbjct: 293 IKALAESVAAHVKSLMN 309
>gi|448746849|ref|ZP_21728514.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
gi|445565777|gb|ELY21886.1| Histone deacetylase superfamily [Halomonas titanicae BH1]
Length = 362
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 111/260 (42%), Positives = 154/260 (59%), Gaps = 13/260 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + +A VH +Y+S D S +G T + + + AAG IA V
Sbjct: 75 ATHEQLARVHTTSYLS------DIFSLRGKNAWLDVDTTAVSPGSVDAAEVAAGTAIAAV 128
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
++V + + FAL+RPPGHHA P GFC+F NVA+AA +A+ A G +RV I+D
Sbjct: 129 EAVMEKRAKS----AFALVRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLIVD 184
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
+D HHGNGT D F+ +PD+ F H+ YPG+G ++EVG G EG+T+N+PLP G+GD
Sbjct: 185 WDAHHGNGTQDIFWAEPDVMFFDIHRAAPFYPGSGHLEEVGAGLAEGTTINVPLPAGAGD 244
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
A F +++ P A FKPD+ILVSAG+D H D +L + + L ++QLA+
Sbjct: 245 EAYLKAFRDILAPAAAWFKPDIILVSAGFDPHWHD--LALNVSYEGFGALTGFLQQLAEQ 302
Query: 260 LCGSRCVFFLEGGYNLNSLS 279
C R VF LEGGYNL SLS
Sbjct: 303 HCDGRLVFVLEGGYNLESLS 322
>gi|405378919|ref|ZP_11032828.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF142]
gi|397324521|gb|EJJ28877.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium sp. CF142]
Length = 311
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 127/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ + Q +L G +A VD V K F RPPGHHA MGFC F
Sbjct: 85 TYASQKSLQAALTGIGGAMAAVDDVFRGKADN----VFVAARPPGHHAEKMTAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQ+AHG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 141 NAAIAARHAQKAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G+ +N PL G R F ++P F+PD+I++SAG+DAH DPLA
Sbjct: 201 NG---AHGTIVNAPLSPNVGSDHFREAFKSRVLPALNDFRPDIIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ T + + ++A +R V LEGGY+L L+ S
Sbjct: 258 INLTGEDFDWATGRLLEVADRSANNRVVSLLEGGYDLEGLAES 300
>gi|400756073|ref|YP_006564441.1| histone deacetylase [Phaeobacter gallaeciensis 2.10]
gi|398655226|gb|AFO89196.1| histone deacetylase [Phaeobacter gallaeciensis 2.10]
Length = 308
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/256 (42%), Positives = 155/256 (60%), Gaps = 12/256 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DDI +H +Y++ L +A+ ++G I+G T+ + + + AAGA + V
Sbjct: 47 AAEDDILRIHPASYLADLRQAL---PKEGFGRIDGD--TFLSPGSLDAAFRAAGAAVRAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + FA +RPPGHHA MGFC FGN A+AA++A HGL RV ++D
Sbjct: 102 DMVLGGEAQN----AFAAVRPPGHHAETDTAMGFCFFGNAALAAKHALDHHGLARVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D+P F+S+ Q +PG+G+ +E G G LNLPLP GSG
Sbjct: 158 FDVHHGNGTQDLLWDEPRALFISSQQMPLWPGSGRPEEDGV---HGQILNLPLPPGSGGV 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
M+ + + P + F+P+LI++SAG+DAH DPLA L ++T + L+ + LA +L
Sbjct: 215 QMKAAYVDQAFPRLRAFQPELIIISAGFDAHQDDPLAELNWSTEDFRWLSRELCALAAEL 274
Query: 261 CGSRCVFFLEGGYNLN 276
CG R V LEGGY+LN
Sbjct: 275 CGGRIVSTLEGGYDLN 290
>gi|107028890|ref|YP_625985.1| histone deacetylase superfamily protein [Burkholderia cenocepacia
AU 1054]
gi|116689952|ref|YP_835575.1| histone deacetylase superfamily protein [Burkholderia cenocepacia
HI2424]
gi|105898054|gb|ABF81012.1| histone deacetylase superfamily [Burkholderia cenocepacia AU 1054]
gi|116648041|gb|ABK08682.1| histone deacetylase superfamily [Burkholderia cenocepacia HI2424]
Length = 369
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 147/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++L+ PA+ D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDLRGAEPATTADLLRIHPAHYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG I VD+V + F+L RPPGHH + PMGFC+ N+ +A A+ H
Sbjct: 114 SAGLAIVAVDAVVGERAAN----AFSLSRPPGHHCLRDRPMGFCMLANIPVAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G++RV +ID+DVHHGNGT +YDDPD +S HQD + PG D+ G G G G+ LN
Sbjct: 170 GIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGADDRGEGAGIGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P RF+P+LI++++G DA +DPLA +Q T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVDPLARMQLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|296533684|ref|ZP_06896238.1| histone deacetylase/AcuC/AphA family protein [Roseomonas cervicalis
ATCC 49957]
gi|296265983|gb|EFH12054.1| histone deacetylase/AcuC/AphA family protein [Roseomonas cervicalis
ATCC 49957]
Length = 309
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 120/195 (61%), Gaps = 4/195 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA P PMGFC+F N IAAR+AQ AHG+ RV ++DFDVHHGNGT A
Sbjct: 117 FCAVRPPGHHAEPATPMGFCLFANAVIAARHAQAAHGIARVAVLDFDVHHGNGTQAAVEA 176
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D I FLS+HQ YPGTG E G G+ +N LP G+ A R + ++P +
Sbjct: 177 DASILFLSSHQSPCYPGTGLESETGVGN----VVNATLPPGADGEAFRQAWSGRLLPALE 232
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P L+++SAG+DAH DPLA L+ + L I ++A LCG R V LEGGY+L
Sbjct: 233 AFRPGLVVISAGFDAHARDPLAQLRVREADFGWLTTEICRIADRLCGGRVVSTLEGGYDL 292
Query: 276 NSLSYSVADSFRAFL 290
+L+ S A RA +
Sbjct: 293 EALAASAACHVRALM 307
>gi|399155825|ref|ZP_10755892.1| histone deacetylase superfamily protein [SAR324 cluster bacterium
SCGC AAA001-C10]
Length = 363
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 154/298 (51%), Gaps = 17/298 (5%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA--GIALVDSV 83
I S H + YV + K + ++ I S TY T F LA GA +A SV
Sbjct: 55 ILSSHTKYYVDKVIK-FSKDQKKRI-----SVDTYLTP--FAADLARLGASGAVASTKSV 106
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
K + F+L+RP GHHA MG+C+F NVAIAA YA R H L R+ IID D
Sbjct: 107 LEGKVKN----AFSLMRPVGHHAHSTHAMGYCIFNNVAIAANYAMREHKLDRIMIIDLDA 162
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT FY ++ F+S HQ +PGTG + G G G N+ +P S + +
Sbjct: 163 HHGNGTEQIFYASDEVLFVSFHQHPWFPGTGDWFKSGTEAGLGYNYNIEMPTWSDNKSYM 222
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
F E++VP A+++KP ILVS G+DAH +D + L + +Y L IK+LA +C
Sbjct: 223 QGFSEIVVPLAEKYKPQFILVSMGFDAHWMDHSSVLGLSVKGFYDLTKAIKELASSICSD 282
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVK 321
R V LEGGYNL S S+ +F A GE + F +P A + Q I +K
Sbjct: 283 RLVLVLEGGYNLKSTGESLVATFSALTGESTFTDSF---GFCPNKPVAPLNQTIIYLK 337
>gi|241203358|ref|YP_002974454.1| histone deacetylase superfamily protein [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240857248|gb|ACS54915.1| histone deacetylase superfamily [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 311
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 128/223 (57%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA++ + Q +L G +A VD V R D F RPPGHHA MGFC F
Sbjct: 85 TYASSKSLQAALTGIGGAMAAVDDVFTG--RADNV--FVAARPPGHHAEKMTAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQ+ HG +R+ I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 141 NAAIAARHAQKTHGAERIAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G+ + +N PL G R F ++P F+PDLI++SAG+DAH DPLA
Sbjct: 201 KGK---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ T + + +LA +R V LEGGY+L L+ S
Sbjct: 258 INLTGEDFDWATGRVLELADRYAKNRVVSLLEGGYDLEGLAES 300
>gi|448388089|ref|ZP_21565029.1| histone deacetylase [Haloterrigena salina JCM 13891]
gi|445670740|gb|ELZ23337.1| histone deacetylase [Haloterrigena salina JCM 13891]
Length = 342
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 116/320 (36%), Positives = 167/320 (52%), Gaps = 27/320 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G + +E+ A
Sbjct: 38 VEYVEADPCDLDRLAAVHEREYLESVRE----------FCADGGGNWDPDTSAVEETWDA 87
Query: 73 A--GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
AG+A AA + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 VCQSAGLACWAVEAALEGATGRRTPFSIGRPPGHHAVYDDAMGFCFVNNVAVAAQHALDS 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG +DE G G GEG+T
Sbjct: 148 EEYDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSLHEQGLYPGTGAVDETGEGAGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDREYLEAVEGPIGHALTDYDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EPSKA-SEFDNPAILY 306
+ + LA D + F LEGGY L+ L+ SVA F G EP + SEF
Sbjct: 268 MTDRFRTLA-DETDAAFAFILEGGYGLDVLADSVAIVHETFDGREPIEPDSEF------- 319
Query: 307 EEPSAKVKQAIERVKHIHSL 326
K + A++ V H L
Sbjct: 320 ---GEKAESALDEVLEEHGL 336
>gi|85860006|ref|YP_462208.1| histone deacetylase family protein [Syntrophus aciditrophicus SB]
gi|85723097|gb|ABC78040.1| histone deacetylase family protein [Syntrophus aciditrophicus SB]
Length = 350
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 108/260 (41%), Positives = 147/260 (56%), Gaps = 8/260 (3%)
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
+++ +L AAG + VA+ K FAL+RPPGHHA GFC+F NVAI A
Sbjct: 90 SYKAALLAAGGLCEAISMVASGKLDN----AFALVRPPGHHAEADRSKGFCLFNNVAIGA 145
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
RYAQ A L+R+ IID+D+HHGNGT +F DP I + STHQ +PGTG DEVGR G
Sbjct: 146 RYAQTALHLQRILIIDWDLHHGNGTQHSFETDPSILYFSTHQYPYFPGTGACDEVGRRTG 205
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G T+N+PL G GD +F +++ A F PDLILVSAG+D + DPL ++ +
Sbjct: 206 LGFTVNVPLSRGYGDGEYAAIFEKILKSIAPEFSPDLILVSAGFDIYGGDPLGGMRVSPK 265
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
+ L I +A C + V LEGGY+L L DS +A L E + S D +
Sbjct: 266 GFAGLTRLIVDIAVSCCSGKVVLTLEGGYDLTGLR----DSVKAVLKELAGLSHTDYADM 321
Query: 305 LYEEPSAKVKQAIERVKHIH 324
+ A V +A++ V ++
Sbjct: 322 ALQANQAAVDRALKPVLQVN 341
>gi|86356563|ref|YP_468455.1| deacetylase [Rhizobium etli CFN 42]
gi|86280665|gb|ABC89728.1| probable deacetylase protein [Rhizobium etli CFN 42]
Length = 311
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/273 (39%), Positives = 146/273 (53%), Gaps = 14/273 (5%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E +E + AS D + H ++ + + + + GI +E TYA+ + Q +L
Sbjct: 40 ERLERRQAPQASEDAVLLAHPEEHLKAVMREIPE-EEDGINQLEAD--TYASVKSLQAAL 96
Query: 71 AAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
G +A VD V A+ N F RPPGHHA MGFC F N AIAAR+AQ
Sbjct: 97 TGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKTTAMGFCFFNNAAIAARHAQ 150
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ HG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPG+G +E G+ +
Sbjct: 151 KRHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGSGAKEERGK---HNTI 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N PL G R F ++P F PDLI++SAG+DAH DPLA + T +
Sbjct: 208 VNAPLSPNVGSEHFREAFKSRVLPALDDFHPDLIIISAGFDAHHRDPLAQINLTGEDFDW 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ +LA +R V LEGGY+L L+ S
Sbjct: 268 ATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|448396826|ref|ZP_21569274.1| histone deacetylase [Haloterrigena limicola JCM 13563]
gi|445673355|gb|ELZ25916.1| histone deacetylase [Haloterrigena limicola JCM 13563]
Length = 343
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 115/319 (36%), Positives = 166/319 (52%), Gaps = 25/319 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P ++ +A+VH R Y+ + + E G + TT E+
Sbjct: 38 VEYVEADPCDLETMAAVHDREYLEEVRE-----------FCENGGGNWDPDTTAVEATWD 86
Query: 73 AG---AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA-- 127
A AG+A + AA + F++ RPPGHHA+ MGFC N A+AA+YA
Sbjct: 87 AARRSAGLACWAAKAALEGETGRKTPFSIGRPPGHHAVYDDAMGFCFVNNAAVAAQYALD 146
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+ + RV I+D+DVHHGNGT+D FYD D+FF+S H+ G YPG+G IDE G GDG G+
Sbjct: 147 HDDYDVDRVAILDWDVHHGNGTHDIFYDSDDVFFVSIHEQGLYPGSGDIDETGEGDGAGT 206
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T+N+P+P G+ + I F PDL+L+SAG+DAH DP++ ++ +T Y
Sbjct: 207 TMNIPMPAGTDENGYLAAIDGPIAAAFTDFDPDLVLISAGFDAHQHDPISRIRLSTEAYA 266
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L+ ++ LA + F LEGGY L+ L+ SVA F G P +
Sbjct: 267 LLSDRMRSLAD-DLDAALAFILEGGYGLDVLADSVALVHETFDGR--------EPIEPDD 317
Query: 308 EPSAKVKQAIERVKHIHSL 326
+PS K +E V H L
Sbjct: 318 DPSDKAIDTLEDVLDEHDL 336
>gi|365899114|ref|ZP_09437035.1| putative deacetylase [Bradyrhizobium sp. STM 3843]
gi|365420209|emb|CCE09577.1| putative deacetylase [Bradyrhizobium sp. STM 3843]
Length = 309
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 147/269 (54%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D + H YV+ L A GI+ ++G T + T++ + G +A +
Sbjct: 52 LDLVLLCHQEHYVTELRHI---APTSGIVYLDGD--TSMSPGTWEAVMRGVGGAVAATSA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V + ++ F +RPPGHHA PMGFC F NVAIAARYAQR G++R I+DFD
Sbjct: 107 VMSGTHQN----AFVAVRPPGHHAEINKPMGFCFFDNVAIAARYAQRQFGIERAAIVDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D F+ D + + STHQ +PGTG E RGD + + +N PL +G
Sbjct: 163 VHHGNGTQDIFWADKSVMYCSTHQMPLFPGTGARGE--RGDHD-TIVNAPLAAENGSLEF 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R+ F +I+P +F P+L+++SAG+DAH DPLASL + + + LA G
Sbjct: 220 RSAFENLILPQLTKFSPELVIISAGFDAHYRDPLASLNLRAEDFGWVTRKLMGLADKTAG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L SVA A G
Sbjct: 280 GRVVSVLEGGYDLQGLKESVAAHVAALTG 308
>gi|329898677|ref|ZP_08272439.1| histone deacetylase superfamily [gamma proteobacterium IMCC3088]
gi|328920778|gb|EGG28233.1| histone deacetylase superfamily [gamma proteobacterium IMCC3088]
Length = 371
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 157/292 (53%), Gaps = 14/292 (4%)
Query: 14 ELKNFSPASV--DDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGPTYATATTFQESL 70
+LK PA V +++A VH Y++ + E + D G L+ SG F+ +
Sbjct: 56 QLKLIKPACVSNEELALVHDLDYINRVAEISADHGGYAGSGLLMPSG-------GFELAA 108
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG A +D+V + +AL+RPPGHHA M CVF N+A+A + A +
Sbjct: 109 LAAGGTKAAIDAVLNKEVSN----AYALVRPPGHHAEKDTGMALCVFSNIAVAVKSAMQE 164
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
HGL++V IID+D HHGNGT AFY DP + LS HQD G G ++ G GDGEG LN
Sbjct: 165 HGLRKVAIIDWDAHHGNGTESAFYSDPSVLTLSIHQDQMIYGRGFVEHNGEGDGEGYNLN 224
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP GSG A T F +I+P +F PDLI+V++G DA DP A + + ++ ++
Sbjct: 225 IPLPPGSGTGAYLTAFERIIIPAVTQFGPDLIVVASGLDAGFSDPTARMLLHSESFRLMT 284
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
+LA ++C V EGGY+ + F G S+ ++ DNP
Sbjct: 285 RYTMELAANVCSGNLVLSHEGGYDPTMTPFLALAIFEELSGLKSRITKEDNP 336
>gi|421469818|ref|ZP_15918251.1| histone deacetylase family protein [Burkholderia multivorans ATCC
BAA-247]
gi|400229051|gb|EJO58926.1| histone deacetylase family protein [Burkholderia multivorans ATCC
BAA-247]
Length = 373
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 150/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ +D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDMRGAAPAAREDLLRIHPAGYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIAAVDAVVDERAAN----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDPD +S HQD + PG G ++ G G G G+ LN
Sbjct: 170 GIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYGGAEDRGAGAGIGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI+V++G DA +DPLA + T +Y +
Sbjct: 230 VPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|424898579|ref|ZP_18322153.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WSM2297]
gi|393182806|gb|EJC82845.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WSM2297]
Length = 311
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 147/277 (53%), Gaps = 22/277 (7%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAM----DRASQQGIILIEGSGPTYATATTF 66
E ++ + AS D + H +++ + + + DR +Q TYA+ +
Sbjct: 40 ERLDRRQAPQASEDAVLLAHPEEHLTAVMREIPEEEDRINQL-------EADTYASVKSL 92
Query: 67 QESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
Q +L G +A VD V A+ N F RPPGHHA MGFC F N AIAA
Sbjct: 93 QAALTGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKMTAMGFCFFNNAAIAA 146
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
R+AQ+ HG +RV IID+DVHHGNGT D F+DDP + F STHQ YPG+G DE G+
Sbjct: 147 RHAQKRHGAERVAIIDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGSGAKDEKGK--- 203
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+ +N PL G R F ++P F+PDLI++SAG+DAH DPLA + T
Sbjct: 204 HNTIVNAPLSPNVGSDHFREAFKSRVLPAVADFRPDLIIISAGFDAHHRDPLAQINLTGE 263
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + +LA +R V LEGGY+L L+ S
Sbjct: 264 DFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|354609341|ref|ZP_09027297.1| histone deacetylase superfamily [Halobacterium sp. DL1]
gi|353194161|gb|EHB59663.1| histone deacetylase superfamily [Halobacterium sp. DL1]
Length = 338
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 160/300 (53%), Gaps = 19/300 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ + +PA+ D +VH YV ++ AS G T A T+ +LA+
Sbjct: 38 VTYEGAAPATEADATAVHDAGYVEEIQSFC--ASGGG----NWDPDTIACPETWPAALAS 91
Query: 73 AGAGIALVDSV---AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
AG + V + A +N P FAL RPPGHHA+ MGFC N AIAA+YA
Sbjct: 92 AGLSMDAVRAALNGADGRNTP-----FALGRPPGHHAVEGDAMGFCFLNNAAIAAQYALD 146
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
G +RV I D+DVHHGNGT D FYD D+F+ S H++G YPGTG DE G G+G G+TL
Sbjct: 147 DLGAERVAIFDWDVHHGNGTQDIFYDSGDVFYASIHEEGLYPGTGDADERGEGEGAGTTL 206
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+P P G GD E++ P F PDL +VSAG+DAH DP++ + + Y +L
Sbjct: 207 NVPFPRGFGDAEYCAAVEELLAPALAEFDPDLFVVSAGFDAHRHDPISRMHVSDEGYALL 266
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG----EPSKASEFDNPAIL 305
++ +A + + F LEGGY+L++L+ + F G EP D A+L
Sbjct: 267 TDRVRDIAAE-TDAALAFVLEGGYSLDALADGIGMVHETFDGRDPIEPDADVTDDARALL 325
>gi|217977488|ref|YP_002361635.1| histone deacetylase superfamily protein [Methylocella silvestris
BL2]
gi|217502864|gb|ACK50273.1| histone deacetylase superfamily [Methylocella silvestris BL2]
Length = 347
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 145/261 (55%), Gaps = 7/261 (2%)
Query: 24 DDIASVHARAY-VSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
DDI + RA+ S L + A+ + G T +A +F+ + A GAG+ VD
Sbjct: 83 DDIETAILRAHSASHLARFKAAATDAENLPYSFDGDTAISAGSFEAAYRAVGAGLLAVDR 142
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V ++R F +RPPGHHA MGFC+F N+AIAA YAQ HG +RV IIDFD
Sbjct: 143 VMDPQSRVAN--AFCEVRPPGHHAERNRIMGFCLFNNIAIAALYAQTRHGAERVAIIDFD 200
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT F+D D+ F STHQ +P TG + + G G+ N PL G G
Sbjct: 201 VHHGNGTQQIFWDHKDVLFASTHQAPLFPYTGALTDT----GAGNIFNAPLRAGDGGPVF 256
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
I+P F+PDLIL+SAG+DAH DPLA L+ + + + + + A+ CG
Sbjct: 257 AEAMTTRILPALDTFRPDLILISAGFDAHFNDPLADLRLSEADFSWITLKLVEAAQKHCG 316
Query: 263 SRCVFFLEGGYNLNSLSYSVA 283
R V FLEGGY L++L+ S A
Sbjct: 317 GRIVSFLEGGYALDALARSTA 337
>gi|336476702|ref|YP_004615843.1| histone deacetylase [Methanosalsum zhilinae DSM 4017]
gi|335930083|gb|AEH60624.1| Histone deacetylase [Methanosalsum zhilinae DSM 4017]
Length = 340
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 152/262 (58%), Gaps = 15/262 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A + I +VH Y+ +E+ R I T + +F +LA+AG +
Sbjct: 49 ADLSLIENVHDLDYIKSVEEHCMRE-------IPLDPDTVVSRDSFNAALASAGGAVKAT 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ V D L FAL RPPGHHA + GFC+F N+AIAARYAQ + G +R+ I+D
Sbjct: 102 ELVL------DEGLAFALTRPPGHHAGYRKARGFCLFNNIAIAARYAQ-SRGFERILIVD 154
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHGNGT + FY DP + + STH +PGTG +DE+G GD +G +N+PLP G ++
Sbjct: 155 WDVHHGNGTQEIFYSDPGVLYFSTHLYPWFPGTGWLDEIGDGDAQGFNINVPLPPGLNNS 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+F ++++P + +F P +I+VSAG D++ DPL ++ T+ + LA+ + +A
Sbjct: 215 DYIYIFKKLLLPISLQFDPQMIMVSAGMDSYSRDPLGNMNITSEGFGELASIVSYIASKT 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSV 282
C +R V LEGGY L+ SV
Sbjct: 275 C-NRMVLVLEGGYIEEDLAKSV 295
>gi|443704318|gb|ELU01419.1| hypothetical protein CAPTEDRAFT_126869 [Capitella teleta]
Length = 802
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 154/276 (55%), Gaps = 14/276 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A++++I H +V +E+ D + ++ L Y + +Q + A G + +V
Sbjct: 488 ATIEEILLAHTSDHVKRVEEFQDLSLEELHSLECDFNSVYLSQEAYQCARIAVGCTLNVV 547
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D +A ++ G A+IRPPGHHA PMGFC F NVAIAARYAQ+ HGLK++ I+D
Sbjct: 548 DEIATGQSCN----GVAVIRPPGHHAEEDRPMGFCYFNNVAIAARYAQKEHGLKKILILD 603
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGEGSTLNLPLP- 194
+DVHHGNGT F DP + ++S H+ + +P D +VG G GEG +N+P
Sbjct: 604 WDVHHGNGTQHIFDHDPSVLYISIHRRDNGFFFPMGDDNDFYQVGLGGGEGFNINIPWEM 663
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
GG GD+ F ++++P A F PDL+L+SAG+DA DPL T Y A++
Sbjct: 664 GGMGDSEYIATFQQIVMPVAYEFNPDLVLISAGFDAAKGDPLGGCAITPEGY----AHLT 719
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ L R + LEGGYNLNS+S S+A L
Sbjct: 720 HMLTGLAHGRVILALEGGYNLNSISESMASCTSILL 755
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 142/280 (50%), Gaps = 14/280 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I +VH+ Y+ + + + + L E + +T++ + AAG+ + LV
Sbjct: 98 ATEAEILAVHSPEYLHQVISSQKMEKNELMKLSERMDGVFFHPSTYESASLAAGSTVDLV 157
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ + K R GFA++RPPGHHA G C+F NVAIAA++A + R+ I+D
Sbjct: 158 EQIVEKKLRN----GFAVVRPPGHHAQHTEANGNCIFNNVAIAAQHALDNLSVNRILIVD 213
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT AFY DP + S H ++G +P D++G+G G +N+P+
Sbjct: 214 WDVHHGQGTQRAFYHDPRVLCFSIHRYEEGEFWPNLRESNYDQIGKGKGLKYNINVPINQ 273
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
GS D ++++P A + P L++VS G+DA V D T Y + +
Sbjct: 274 TGSTDADYLAFIQQILLPVAYEYSPQLVIVSGGFDAAVGDAEGKGYVTPAGYAAMLHMLM 333
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
LA+ R LEGGY L SL+ S A R LG P
Sbjct: 334 SLAE----GRVAVVLEGGYCLPSLAESSALCVRTLLGHPC 369
>gi|90422663|ref|YP_531033.1| histone deacetylase superfamily protein [Rhodopseudomonas palustris
BisB18]
gi|90104677|gb|ABD86714.1| histone deacetylase superfamily [Rhodopseudomonas palustris BisB18]
Length = 309
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 147/271 (54%), Gaps = 12/271 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +D IA H ++ L + + Q G+I ++ T + T++ +L + G +A
Sbjct: 50 ADLDTIALCHTDHHIVELRQM---SPQTGLIFVDSD--TSMSPGTWEAALRSVGGAVAAT 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + F RPPGHHA PMGFC FGN AIAARYAQR +G+ R ++D
Sbjct: 105 DAVMTGQVHN----AFVATRPPGHHAEIGKPMGFCFFGNAAIAARYAQRKYGIGRAAVVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT + F+ D + + STHQ +PGTG + E G D + +N PL G
Sbjct: 161 FDVHHGNGTQEIFWGDKTVMYCSTHQMPLFPGTGAVGERGEHD---NIVNAPLQSEDGTA 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F ++I+P F P+LI++SAG+DAH DPLASL T + + + +A
Sbjct: 218 KFRAAFDDLILPRLTAFAPELIVISAGFDAHCRDPLASLNLQTEDFAWVTQKLMDVADLS 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L L SV A +G
Sbjct: 278 AGGRIVSVLEGGYDLQGLRESVNAHVGALMG 308
>gi|115351970|ref|YP_773809.1| histone deacetylase superfamily protein [Burkholderia ambifaria
AMMD]
gi|115281958|gb|ABI87475.1| histone deacetylase superfamily [Burkholderia ambifaria AMMD]
Length = 369
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 148/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ DD+ +H +Y+ D G + G G +Y AT
Sbjct: 61 LDMRGAAPATADDLLRIHPASYLDAFRALSDAHGGDLGDLAPFGKG-SYEIATL------ 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA +D+V A F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIAAIDTVVAEHAAS----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDP+ +S HQD + PG + G G G G+ LN
Sbjct: 170 GIDRVAVIDWDVHHGNGTQSIYYDDPNTLTISLHQDRCFPPGYSGGSDRGEGAGVGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI+V++G DA +DPLA + T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVLPALERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K A+ CG R V EGGY+
Sbjct: 290 RAVKDAAQRHCGGRLVIVHEGGYS 313
>gi|448730443|ref|ZP_21712751.1| HdaI-type histone deacetylase [Halococcus saccharolyticus DSM 5350]
gi|445793611|gb|EMA44183.1| HdaI-type histone deacetylase [Halococcus saccharolyticus DSM 5350]
Length = 336
Score = 190 bits (482), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 136/233 (58%), Gaps = 3/233 (1%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T A T+ +L +AG + ++ + + P FAL RPPGHHA+ MGFC
Sbjct: 78 TVAVEATWDAALRSAGQAVWAAEAALDGASGRETP--FALGRPPGHHAVADDAMGFCFLN 135
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAA +RV I+D+DVHHGNGT D F D D+F+ S H+ G YPGTG+ E
Sbjct: 136 NAAIAAEAMIDDGRAERVAIVDWDVHHGNGTQDIFEDRGDVFYASIHERGLYPGTGEAGE 195
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
+G GDGEG+T+NL P G+GD A EV P F PDL+LVSAG+DAH DP++
Sbjct: 196 IGTGDGEGATVNLAYPSGAGDPAYVAAIDEVFAPLLDEFGPDLLLVSAGFDAHEHDPISR 255
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ +T Y +LAA ++ LA D + F LEGGY L++LS S+ F G
Sbjct: 256 MSVSTEGYGVLAARLRDLA-DRSDAGFGFVLEGGYGLDTLSESITTVNEVFGG 307
>gi|302870568|ref|YP_003839205.1| histone deacetylase superfamily protein [Micromonospora aurantiaca
ATCC 27029]
gi|302573427|gb|ADL49629.1| histone deacetylase superfamily [Micromonospora aurantiaca ATCC
27029]
Length = 376
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 151/271 (55%), Gaps = 13/271 (4%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESL 70
EL + P A+V ++ VH A+V ++ D RA G G + ++ +
Sbjct: 58 ELMSIEPRRATVAELLRVHTEAHVQHIKAQSDLRAGGDA-----GDGFSPVGHGSYDIAR 112
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG I LV + D G+AL+RPPGHHA + MGFC+F ++A+AAR+AQ
Sbjct: 113 LAAGGLIELVTAAVHG----DITNGYALLRPPGHHATAEAGMGFCLFNSIAVAARHAQAE 168
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTL 189
GL R+ ++DFD HHGNGT FYDDP + +S HQ G + P +G E G G G G L
Sbjct: 169 LGLARIAVVDFDAHHGNGTQSIFYDDPSVLTISLHQAGCFPPDSGWTHENGTGYGTGYAL 228
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP GSG A + H+V++P RF PDLIL++AG+DA+V DPLA T +Y +
Sbjct: 229 NVPLPPGSGHAAYLSAMHQVVLPVLDRFAPDLILLAAGFDANVWDPLARQMLTAASYREM 288
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSY 280
+ A LC R + EGGYN + Y
Sbjct: 289 TRLLIDAADRLCHGRLIAAHEGGYNPWYVPY 319
>gi|149375683|ref|ZP_01893452.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
gi|149360085|gb|EDM48540.1| histone deacetylase superfamily protein [Marinobacter algicola
DG893]
Length = 368
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 154/272 (56%), Gaps = 13/272 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D + VH +++ + D ++ + T + + + + AAG IA V
Sbjct: 78 ATPDQLRRVHTTSFLDDIFSLRDESAWLDV------DTTAVSPGSVEAAEVAAGTAIAAV 131
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
++V + FA++RPPGHHA P GFC+F NVA+AA +AQ G +RV I+D
Sbjct: 132 EAVVEGRTNS----AFAMVRPPGHHAEPVRARGFCLFNNVAVAAAHAQAELGCERVLIVD 187
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
+D HHGNGT D F+ DPD F H+ YPG+G + +VG G GEG+T+N+P+PGG+GD
Sbjct: 188 WDAHHGNGTQDIFWADPDTMFFDIHRAAPFYPGSGALTDVGAGLGEGTTINVPMPGGAGD 247
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
A E++VP A FKPDL+LVSAG+DAH D +L + + + ++++A
Sbjct: 248 VAYLKALREILVPAADYFKPDLVLVSAGFDAHWYD--LALNVSYEGFAAMTGIVQEIADK 305
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
C R LEGGYN SLS+ V RA G
Sbjct: 306 HCNGRLAMVLEGGYNTESLSHGVHAVLRALAG 337
>gi|359395499|ref|ZP_09188551.1| hypothetical protein KUC_2156 [Halomonas boliviensis LC1]
gi|357969764|gb|EHJ92211.1| hypothetical protein KUC_2156 [Halomonas boliviensis LC1]
Length = 362
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 154/260 (59%), Gaps = 13/260 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + +A VH +Y+S D S +G T + + + AAG IA V
Sbjct: 75 ATHEQLARVHTTSYLS------DIFSLRGKNAWLDVDTTAVSPGSIDAAEVAAGTAIAAV 128
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
++V + + FAL+RPPGHHA P GFC+F NVA+AA +A+ A G +RV I+D
Sbjct: 129 EAVVDKRAKS----AFALVRPPGHHAEPVRARGFCLFNNVAVAAAHARSALGCERVLIVD 184
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
+D HHGNGT D F+ +PD+ F H+ YPG+G ++EVG G EG+T+N+PLP G+GD
Sbjct: 185 WDAHHGNGTQDIFWAEPDVMFFDIHRAAPFYPGSGHLEEVGAGLAEGTTINVPLPAGAGD 244
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
A F +++ P A FKPD+ILVSAG+D H D +L + + L ++QLA+
Sbjct: 245 EAYLKAFRDILAPAAAWFKPDIILVSAGFDPHWHD--LALNVSYEGFGALTGFMQQLAEQ 302
Query: 260 LCGSRCVFFLEGGYNLNSLS 279
C R VF LEGGYNL SL+
Sbjct: 303 HCDGRLVFVLEGGYNLESLA 322
>gi|255264554|ref|ZP_05343896.1| histone deacetylase 14 [Thalassiobium sp. R2A62]
gi|255106889|gb|EET49563.1| histone deacetylase 14 [Thalassiobium sp. R2A62]
Length = 308
Score = 190 bits (482), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 119/188 (63%), Gaps = 3/188 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FA +RPPGHHA PMGFC+FG+V+IAA++A HGLKRV I+DFDVHHGNGT D D
Sbjct: 113 FAAVRPPGHHAERTTPMGFCLFGSVSIAAKHALDHHGLKRVAIVDFDVHHGNGTQDLCED 172
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D I F STHQ YPGTG E G G+ LN+PLP G+G A R +++P
Sbjct: 173 DARILFCSTHQMPLYPGTGHAHEDG---AYGNVLNVPLPDGAGSKAFRDAMERLVLPAVD 229
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
FKP+L+L+SAG+DAH DPLA ++ + + + LA C R V LEGGY+L
Sbjct: 230 AFKPELLLISAGFDAHADDPLAGMRLVEDDFAWVTEQLCDLADRHCQGRVVSTLEGGYDL 289
Query: 276 NSLSYSVA 283
+L+ S A
Sbjct: 290 EALAASTA 297
>gi|170739305|ref|YP_001767960.1| histone deacetylase superfamily protein [Methylobacterium sp. 4-46]
gi|168193579|gb|ACA15526.1| histone deacetylase superfamily [Methylobacterium sp. 4-46]
Length = 326
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 147/267 (55%), Gaps = 12/267 (4%)
Query: 30 HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNR 89
H AYV+ + + + R +L + P A+ T + L +AGA + VD V + R
Sbjct: 59 HDEAYVAAMIEGLRRGD---CVLADDDTP--ASPGTLEAVLRSAGAAVQAVDEVMTGQVR 113
Query: 90 PDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGT 149
F+ +RPPGHHA GFC F NVA+AAR+AQ HG R+ I+D+D HHG+GT
Sbjct: 114 N----AFSAMRPPGHHAGRARATGFCFFNNVAVAARHAQAVHGAARIAIVDWDAHHGDGT 169
Query: 150 NDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
+ F+ D + F STHQ YPG+G + E G D + +N+PLP G+ T R
Sbjct: 170 QEIFWSDASVLFCSTHQWPLYPGSGAVSERGEHD---TIVNVPLPPGADGTMFRESLDVA 226
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
++P + F+PDLIL+SAG+DAH DPL+ L T + + +A + G+R V L
Sbjct: 227 VLPRIRAFRPDLILISAGFDAHWRDPLSDLNLTEADFGWATQRLVDIADQVSGARMVSLL 286
Query: 270 EGGYNLNSLSYSVADSFRAFLGEPSKA 296
EGGY+L L+ S A + PS++
Sbjct: 287 EGGYDLIGLARSAEAHVAALMAPPSRS 313
>gi|254440544|ref|ZP_05054038.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
gi|198255990|gb|EDY80304.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
Length = 307
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 147/261 (56%), Gaps = 13/261 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ H +A++ ++ A A +G ++ T+ + T + + AAGA + V
Sbjct: 47 AADDDLLRAHPKAHIQTIKAA---APSEGWRSLDAD--THMSVGTLEAAYRAAGAVVKAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A D FA +RPPGHHA + MGFC FG+VA+AA++A HGLKRV I+D
Sbjct: 102 DLVMAG----DVGNAFAAVRPPGHHAERETAMGFCFFGSVAVAAKHALEFHGLKRVAILD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +D I F S+HQ +PGTG E G G+ +N+PLP G G
Sbjct: 158 FDVHHGNGTQDLVEEDARILFCSSHQMPLFPGTGAAHETGVGN----VVNVPLPDGCGSA 213
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
RT + + P FKP+L+L+SAG+DAH DPLA + + + + LA
Sbjct: 214 TFRTAWERQVFPRVDAFKPELLLISAGFDAHANDPLAGVLLHEDDFAWITGKLCDLADKH 273
Query: 261 CGSRCVFFLEGGYNLNSLSYS 281
C R V LEGGY+L +L S
Sbjct: 274 CSGRVVSALEGGYDLEALGRS 294
>gi|170733290|ref|YP_001765237.1| histone deacetylase superfamily protein [Burkholderia cenocepacia
MC0-3]
gi|169816532|gb|ACA91115.1| histone deacetylase superfamily [Burkholderia cenocepacia MC0-3]
Length = 369
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 146/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++L+ PA+ D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDLRGAEPATTADLLRIHPAHYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG I VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIGAVDAVVGERAAN----AFSLSRPPGHHCLRDRPMGFCMLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G++RV +ID+DVHHGNGT +YDDPD +S HQD + PG D+ G G G G+ LN
Sbjct: 170 GIERVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGADDRGEGAGIGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P RF+P+LI++++G DA +DPLA +Q T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVLPALARFRPELIVIASGLDASAVDPLARMQLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ C R V EGGY+
Sbjct: 290 RAVKEAAQRHCSGRLVIVHEGGYS 313
>gi|149175826|ref|ZP_01854444.1| acetoin utilization protein [Planctomyces maris DSM 8797]
gi|148845273|gb|EDL59618.1| acetoin utilization protein [Planctomyces maris DSM 8797]
Length = 310
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/271 (39%), Positives = 155/271 (57%), Gaps = 10/271 (3%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ LK+ + + +++ VH Y++ L+ S G IE T +A +++ +
Sbjct: 40 LMILKDPTVGAGEELLRVHPETYLNQLQAF----SAAGGGRIESD--TVMSADSYEVARY 93
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG + VD V + + F+ RPPGHHA+ MGFC+ NVAIAAR+A H
Sbjct: 94 AAGCAVEAVDRVIMGQVKQV----FSASRPPGHHALSDRAMGFCLLNNVAIAARHAIDFH 149
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
GL RV I+D+DVHHGNGT D FY++ ++F S H+ YPGTG E G G G G+ NL
Sbjct: 150 GLNRVLIVDWDVHHGNGTQDIFYEEESVYFFSAHRHPFYPGTGLGHETGSGAGLGTIWNL 209
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G + F ++V A R +P+LIL+SAG+DAH DP+ SL T + L
Sbjct: 210 PLAFGISRQDYFSQFERMLVDAAARCQPELILISAGFDAHKDDPIGSLGLETEDFGRLTQ 269
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+K++A++ CG R V LEGGY+ L+ SV
Sbjct: 270 LVKEVAREYCGGRIVSLLEGGYHPQRLAESV 300
>gi|433776344|ref|YP_007306811.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
gi|433668359|gb|AGB47435.1| deacetylase, histone deacetylase/acetoin utilization protein
[Mesorhizobium australicum WSM2073]
Length = 308
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/236 (44%), Positives = 133/236 (56%), Gaps = 10/236 (4%)
Query: 48 QGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAI 107
+GI I+ T A+ ++Q + A GA A VD V A + F RPPGHHA
Sbjct: 74 EGIARIDAD--TTASPKSWQAVITAIGAANAAVDDVFAGRADN----VFVAARPPGHHAE 127
Query: 108 PKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD 167
MGFC F AIAAR+AQR HG +RV ++D+DVHHGNGT D F+DDP + + STHQ
Sbjct: 128 KTTAMGFCFFNTAAIAARHAQRKHGAERVAVVDWDVHHGNGTQDIFWDDPSVLYCSTHQM 187
Query: 168 GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAG 227
YPGTG E G G+ +N PL +G R F ++P F PDLI+VSAG
Sbjct: 188 PLYPGTGAKSET----GAGNIVNAPLAPRTGSEVFRDAFLSRVLPALDNFAPDLIIVSAG 243
Query: 228 YDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+DAH DPLA + T + + Q A G+R V LEGGY+L L++SVA
Sbjct: 244 FDAHHRDPLAEINLTEDDFDWATGQLMQRAAIHGGNRLVSLLEGGYDLQGLAFSVA 299
>gi|424873988|ref|ZP_18297650.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. viciae WSM1455]
gi|393169689|gb|EJC69736.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. viciae WSM1455]
Length = 311
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 127/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA++ + Q +L G +A VD V R D F RPPGHHA MGFC F
Sbjct: 85 TYASSKSLQAALTGIGGAMAAVDDVFTG--RADNV--FVAARPPGHHAEKMTAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQ+ HG +R+ I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 141 NAAIAARHAQKTHGAERIAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + +N PL G R F ++P F+PDLI++SAG+DAH DPLA
Sbjct: 201 KGT---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ T + + +LA +R V LEGGY+L L+ S
Sbjct: 258 INLTGEDFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|374629880|ref|ZP_09702265.1| histone deacetylase superfamily [Methanoplanus limicola DSM 2279]
gi|373907993|gb|EHQ36097.1| histone deacetylase superfamily [Methanoplanus limicola DSM 2279]
Length = 358
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 141/255 (55%), Gaps = 12/255 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ +VH Y+ L++A I E TYA +L +AG +
Sbjct: 53 ATDEEVLAVHTGDYLRRLKEA-------DISGAEFDENTYAPPGFLNNTLLSAGGAVTAG 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
++V + + R FALIRPPGHHA GFC NVA+ R Q G+KR+ IID
Sbjct: 106 EAVMSGEVRN----AFALIRPPGHHAGRDFAGGFCYLNNVAVMTRSLQNL-GVKRLMIID 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+D HHGNGT D FYDDPD+ ++S HQ+ +PGTG+I ++G GD G T+N+P+ GS
Sbjct: 161 WDAHHGNGTQDIFYDDPDVLYISIHQEHCFPGTGRIKDIGEGDARGRTINMPVAPGSSGR 220
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R + E+IVP A+ FKP I VSAG D H D L T Y L + LA+ L
Sbjct: 221 VYRYLMKEIIVPAAEEFKPGFIAVSAGQDNHFTDQQTRLALDTKGYADLMSEAVYLAEKL 280
Query: 261 CGSRCVFFLEGGYNL 275
CG R LEGGY++
Sbjct: 281 CGGRIAAVLEGGYSV 295
>gi|443473756|ref|ZP_21063778.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
gi|442904630|gb|ELS29607.1| Deacetylase [Pseudomonas pseudoalcaligenes KF707]
Length = 372
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 141/258 (54%), Gaps = 10/258 (3%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
FSPAS D+ VH YV + A G G T + + AAGA I
Sbjct: 60 FSPASEADLLRVHTPEYVDRILNPTGPAWSDA-----GDGETPVGPGSADVARLAAGAVI 114
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
+ +V + +AL+RPPGHHAI MG+C+F N AI R+ Q+ + RV
Sbjct: 115 STFGAVVSGTVTN----AYALVRPPGHHAIAGQGMGYCIFHNTAIGIRHLQQTGAVSRVA 170
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGG 196
+ID+DVHHGNGT FYDDP + +S HQD YP G GK+ +VG G G G+ LN+PLP G
Sbjct: 171 VIDWDVHHGNGTETLFYDDPSVLTISLHQDDLYPIGRGKVQDVGTGPGVGANLNIPLPAG 230
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
SG A F V+VP +RF+PDLI++++G+D+ +DP + Y L + L
Sbjct: 231 SGRGAYVAAFERVVVPAIRRFRPDLIVIASGFDSAAMDPFGRQLLHSEAYRELTTLVMDL 290
Query: 257 AKDLCGSRCVFFLEGGYN 274
A ++C SR EGGY+
Sbjct: 291 ADEVCKSRVAAVHEGGYD 308
>gi|357027706|ref|ZP_09089772.1| acetylspermidine deacetylase [Mesorhizobium amorphae CCNWGS0123]
gi|355540407|gb|EHH09617.1| acetylspermidine deacetylase [Mesorhizobium amorphae CCNWGS0123]
Length = 308
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/258 (40%), Positives = 143/258 (55%), Gaps = 13/258 (5%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I H +V+ + A+ + GI+ I+ T A+ ++Q ++ A GA A VD V
Sbjct: 55 ILYAHPEDFVARVRAAI---PETGIVSIDAD--TSASPKSWQAAVTAIGAANAAVDDVFE 109
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ F RPPGHHA MGFC+F AIAARYAQ+ H +RV ++D+DVHH
Sbjct: 110 GRAAN----AFVAARPPGHHAEKTTAMGFCLFNTAAIAARYAQKKHQAERVAVVDWDVHH 165
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D F+DDP + + STHQ YPGTG +E G G+ +N PL +G R
Sbjct: 166 GNGTQDIFWDDPSVLYCSTHQMPLYPGTGAKNET----GAGNIVNAPLAPRTGSEVFRDA 221
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F ++P F PDLI++SAG+DAH DPLA + T + + + A G+R
Sbjct: 222 FLSRVLPALDDFAPDLIIISAGFDAHHRDPLAEINLTEEDFDWATGQLMERAGRHSGNRL 281
Query: 266 VFFLEGGYNLNSLSYSVA 283
V LEGGY+L L++SVA
Sbjct: 282 VSLLEGGYDLQGLAFSVA 299
>gi|259417532|ref|ZP_05741451.1| histone deacetylase superfamily protein [Silicibacter sp.
TrichCH4B]
gi|259346438|gb|EEW58252.1| histone deacetylase superfamily protein [Silicibacter sp.
TrichCH4B]
Length = 308
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 161/289 (55%), Gaps = 18/289 (6%)
Query: 11 EIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
E + LK S A+ DD+ +H +Y++ L + + ++ E T+ + +
Sbjct: 35 EGLNLKRVSAPMAAEDDVLRIHPASYLADLRRTLPSEGRK-----ELDADTWMSPGSLDA 89
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAGA + VD V + + F RPPGHHA PMGFC+ GN A+AA++A
Sbjct: 90 AFRAAGAVVRAVDLVLSGEVYN----AFCATRPPGHHAETDTPMGFCLLGNAALAAKHAL 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ L+RV ++DFDVHHGNGT D +D+ +S+ Q +PG+G +E G G+
Sbjct: 146 DHYNLRRVAVVDFDVHHGNGTQDLLWDERRALVISSQQMPLWPGSGHAEEDG---ACGNV 202
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+NLP P S MR + E P + FKP+LI++SAG+DAH DPLA L + T +
Sbjct: 203 MNLPFPPESTGATMRNAYTEQAFPRLRAFKPELIILSAGFDAHRDDPLAQLNWETDDFRW 262
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKAS 297
L A + LA++LC R V LEGGY+LN+L AD+ +A + E KA+
Sbjct: 263 LTAELCALAQELCQGRIVSTLEGGYDLNAL----ADAAKAHVEELIKAA 307
>gi|126463558|ref|YP_001044672.1| histone deacetylase superfamily protein [Rhodobacter sphaeroides
ATCC 17029]
gi|126105222|gb|ABN77900.1| histone deacetylase superfamily [Rhodobacter sphaeroides ATCC
17029]
Length = 324
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/262 (40%), Positives = 144/262 (54%), Gaps = 13/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A D+ H +AY+ + A +G+ T+ + +F+ ++ A
Sbjct: 56 LERREAPLAEEADVLRCHPQAYLDRIRAAEPAEGIRGL-----DPDTWMSPGSFEAAMRA 110
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G A VD V A + F RPPGHHA + PMGFC+FG+ AIAA++A HG
Sbjct: 111 VGGTCAAVDLVLAGEASS----AFVGCRPPGHHAERERPMGFCLFGSAAIAAKHALDHHG 166
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV ++DFDVHHGNGT D +D+ F+S+HQ YPGTG DE G G LNLP
Sbjct: 167 LGRVAVVDFDVHHGNGTQDLLWDESRALFVSSHQMPLYPGTGAADERG---AHGQILNLP 223
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L GSG MRT + E + ++P+LIL+SAG+DAH DPLA+L + + L
Sbjct: 224 LAPGSGSAEMRTAWEEAFRRI-EAWQPELILISAGFDAHAADPLANLNWREADFAWLTGR 282
Query: 253 IKQLAKDLCGSRCVFFLEGGYN 274
+ LA CG R V LEGGY+
Sbjct: 283 LCDLAAASCGGRVVSTLEGGYD 304
>gi|448363792|ref|ZP_21552388.1| histone deacetylase [Natrialba asiatica DSM 12278]
gi|445645674|gb|ELY98674.1| histone deacetylase [Natrialba asiatica DSM 12278]
Length = 341
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/278 (42%), Positives = 158/278 (56%), Gaps = 19/278 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAGA 75
P S+D+IA+VH RAY+ +E +G G T A T+ +AG
Sbjct: 45 PCSLDEIAAVHDRAYIESVES----------FCADGGGNWDPDTTAVEDTWDAVRYSAGQ 94
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--QRAHGL 133
VD+ + D P F++ RPPGHHA+ MGFC NVA+AA+YA + + +
Sbjct: 95 ACWAVDAALSGATGRDTP--FSIGRPPGHHAVTDDAMGFCFVNNVAVAAQYALDRDDYDV 152
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G GD G+T+N+P+
Sbjct: 153 DRVAIVDWDVHHGNGTQDIFYDREDVFFVSIHEQGLYPGTGDIDETGTGDATGTTMNIPM 212
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
P G+ D I + F PDL+LVSAG+DAH DP++ ++ +T Y +LA +
Sbjct: 213 PAGTDDAGYLAAVDGPIAAALESFDPDLLLVSAGFDAHRHDPISRIRLSTEAYALLADRL 272
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ LA D S F LEGGY LN L+ SV+ F G
Sbjct: 273 RTLADDTDAS-LAFVLEGGYGLNVLADSVSIVHETFDG 309
>gi|116250751|ref|YP_766589.1| histone deacetylase-like amidohydrolase [Rhizobium leguminosarum
bv. viciae 3841]
gi|115255399|emb|CAK06474.1| putative histone deacetylase-like amidohydrolase [Rhizobium
leguminosarum bv. viciae 3841]
Length = 311
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 127/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA++ + Q +L G +A VD V R D F RPPGHHA MGFC F
Sbjct: 85 TYASSKSLQAALTGIGGAMAAVDDVFTG--RADNV--FVAARPPGHHAEKMTAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQR HG +R+ I+D+DVHHGNGT D F+DD + F STHQ YPGTG DE
Sbjct: 141 NAAIAARHAQRTHGAERIAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G+ + +N PL G R F ++P F+PDLI++SAG+DAH DPLA
Sbjct: 201 KGK---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ T + + +LA +R V LEGGY+L L+ S
Sbjct: 258 INLTGEDFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|372281825|ref|ZP_09517861.1| histone deacetylase superfamily protein [Oceanicola sp. S124]
Length = 308
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 142/250 (56%), Gaps = 12/250 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
D+ H + Y+ + A Q ++ T+ + +++ +L +AG IA VD+V
Sbjct: 51 DLLLCHPQGYIDRVRGAEPAEGQ-----VQMDPDTWMSPGSYRAALRSAGGAIAAVDAVL 105
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
R D F RPPGHHA + PMGFC+FGNVA+AA++A GL+RV I D DVH
Sbjct: 106 --DGRADN--AFVATRPPGHHAETESPMGFCLFGNVALAAKHALERRGLQRVAIFDPDVH 161
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNGT D DP I F+STHQ YPGTG DE G D + N+PL G+ R
Sbjct: 162 HGNGTQDLVQSDPRILFISTHQQPLYPGTGNRDEFGPHD---TIRNIPLSAGTDGEVYRM 218
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
+ + ++P + F P+LIL+S+G+DAH DPLAS+ T + L + LA ++CG R
Sbjct: 219 IVTQQVLPKIRSFAPELILLSSGFDAHRDDPLASISLETQDFRWLTDQVAALAGEVCGGR 278
Query: 265 CVFFLEGGYN 274
V LEGGYN
Sbjct: 279 LVSCLEGGYN 288
>gi|374330010|ref|YP_005080194.1| Histone deacetylase family protein [Pseudovibrio sp. FO-BEG1]
gi|359342798|gb|AEV36172.1| Histone deacetylase family protein [Pseudovibrio sp. FO-BEG1]
Length = 306
Score = 188 bits (478), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 146/262 (55%), Gaps = 12/262 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
+ DIA VH+ Y++ + + ++G L++ + T + +++ ++ A G VD
Sbjct: 48 TFQDIARVHSSDYINSIH---NMNPEEG--LVDFAPDTNLSPGSWESAMRAVGGSTRCVD 102
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
V + + FA RPPGHHA GFC+F N AIAARYAQ +GL+RV I+DF
Sbjct: 103 EVMSKRVSN----AFAACRPPGHHAETALTSGFCLFNNAAIAARYAQDVYGLERVAIMDF 158
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT + F+ DP + + STHQ +PGTG ++E G + +N PL G T
Sbjct: 159 DVHHGNGTQEIFWADPTVMYTSTHQMPLFPGTGAVNETGE---HNNIVNAPLTAGDDGTQ 215
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R I+P + F PDLI++SAG+DAH DPL L+ T + + ++A D C
Sbjct: 216 FREALDYAILPRIREFSPDLIIISAGFDAHERDPLGGLRLTELDFAWATRKLIEIADDCC 275
Query: 262 GSRCVFFLEGGYNLNSLSYSVA 283
R V LEGGY+L L+ S A
Sbjct: 276 EGRVVSLLEGGYDLEGLARSAA 297
>gi|294085328|ref|YP_003552088.1| histone deacetylase/AcuC/AphA family protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664903|gb|ADE40004.1| histone deacetylase/AcuC/AphA family protein [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 376
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 167/320 (52%), Gaps = 15/320 (4%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E+I +K AS D+I +H RA++ LE + T ++ +
Sbjct: 60 EVIRIKP-RVASDDEILRIHTRAHLDRLEALCAAGGGEAGDA------TPVGVASYDIAK 112
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG IA VD+V + D + L RPPGHHA P+ GFC+ N AI +A++
Sbjct: 113 LAAGGVIATVDAVMSG----DVDNAYVLCRPPGHHAEPELVTGFCLLANGAIGIEHARQV 168
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTL 189
HG+KR+ ++D+DVHHGNG FYDDP+I +S HQD + P GK+ E G +G+ +
Sbjct: 169 HGVKRIAVVDYDVHHGNGCETIFYDDPNILTISVHQDNLFPPDRGKLTETGGSHAKGANI 228
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP GSG A F +++P RF+P+LI V++G+DA +DPLA + Y L
Sbjct: 229 NIPLPPGSGSGAYAEAFERIVLPSLYRFEPELIFVASGFDASAMDPLAHMMLGAADYRAL 288
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE-FDNPAILYEE 308
A ++++++ C R +F EGGY + + Y G + ++ FD + Y
Sbjct: 289 AGALRKVSEKTCAGRIIFTHEGGYAASHVPYCGLAVLETLSGHQTGITDPFDEFIVGYGG 348
Query: 309 PSAKVKQA--IERVKHIHSL 326
S + QA I + +H L
Sbjct: 349 QSLQPHQATVIAEIASLHQL 368
>gi|254471631|ref|ZP_05085032.1| histone deacetylase superfamily protein [Pseudovibrio sp. JE062]
gi|211958833|gb|EEA94032.1| histone deacetylase superfamily protein [Pseudovibrio sp. JE062]
Length = 306
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 146/262 (55%), Gaps = 12/262 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
+ DIA VH+ Y++ + + ++G L++ + T + +++ ++ A G VD
Sbjct: 48 TFQDIARVHSSDYINSIH---NMNPEEG--LVDFAPDTNLSPGSWESAMRAVGGSTRCVD 102
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
V + + FA RPPGHHA GFC+F N AIAARYAQ +GL+RV I+DF
Sbjct: 103 EVMSKRVSN----AFAACRPPGHHAETAVTSGFCLFNNAAIAARYAQDVYGLERVAIMDF 158
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT + F+ DP + + STHQ +PGTG ++E G + +N PL G T
Sbjct: 159 DVHHGNGTQEIFWADPTVMYTSTHQMPLFPGTGAVNETGE---HNNIVNAPLTAGDDGTQ 215
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R I+P + F PDLI++SAG+DAH DPL L+ T + + ++A D C
Sbjct: 216 FREALDYAILPRIREFSPDLIIISAGFDAHERDPLGGLRLTELDFAWATRKLIEIADDCC 275
Query: 262 GSRCVFFLEGGYNLNSLSYSVA 283
R + LEGGY+L L+ S A
Sbjct: 276 EGRVISLLEGGYDLEGLARSAA 297
>gi|194894640|ref|XP_001978099.1| GG17876 [Drosophila erecta]
gi|190649748|gb|EDV47026.1| GG17876 [Drosophila erecta]
Length = 1130
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/321 (36%), Positives = 172/321 (53%), Gaps = 25/321 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQ--QGIILIEGSGPTYATATTFQESLAAAGAGIA 78
A+ D++ H RA+V+ + + + R + G I S Y TF + AAG+ +
Sbjct: 585 ATTDEVCLAHTRAHVNTVRRLLGREPEDLHGAAAIYNS--VYLHPRTFDCATLAAGSVLQ 642
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VDSV ++R G +RPPGHHA P GFC+F NVAIAA+YA R GL+RV I
Sbjct: 643 AVDSVLRGESRS----GICNVRPPGHHAEQDQPHGFCIFNNVAIAAQYAIRDFGLERVLI 698
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNGT F +P + ++S H+ +P G D VG+G G G +N+P
Sbjct: 699 VDWDVHHGNGTQHIFESNPKVLYMSLHRYEHGAFFPKGPDGNFDVVGKGAGRGFNVNIPW 758
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G GD F ++++P A F P L+LVSAG+DA + DPL + T Y ML
Sbjct: 759 NKKGMGDLEYALAFQQLVMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHW 818
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE--PSK---ASEFDNPA-ILY 306
+ LA R + LEGGYN+NS+SY++ + LG+ P+ A+ PA + Y
Sbjct: 819 LSALA----SGRIIVCLEGGYNVNSISYAMTMCTKTLLGDYVPTPQLGAAALQKPATVAY 874
Query: 307 EEPSAKVKQAIE-RVKHIHSL 326
+ ++Q ++ + H SL
Sbjct: 875 QSCVESLQQCLQVQRNHWRSL 895
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 160/291 (54%), Gaps = 16/291 (5%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGL-EKAMDRASQQGIILIEGSGPTYATATTFQES 69
+EL + S A+ D+I +H + L E + R ++ L Y +TF+ S
Sbjct: 148 RCLELPSRS-ATKDEILRLHTEEHFERLKETSGIRDDERMEELSSRYDSIYIHPSTFELS 206
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
L A+G+ I LVD + A K + G A+IRPPGHHA+ G+C F NVA+AA++A
Sbjct: 207 LLASGSTIELVDHLVAGKAQN----GMAIIRPPGHHAMKAEYNGYCFFNNVALAAQHALD 262
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKID--EVGRGDG 184
H L+R+ IID+DVHHG GT FY+DP + + S H + GS +P + D +G G G
Sbjct: 263 VHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLQESDYHAIGAGAG 322
Query: 185 EGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
G N+PL G + +F ++++P A F+P+LI+VSAGYDA + P ++ T
Sbjct: 323 TGYNFNVPLNALGMTNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALGCPEGEMEVTP 382
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
Y L + +LA +R LEGGY L+SL+ A + R+ LG+P
Sbjct: 383 ACYPHLLNPLLRLAD----ARVAVVLEGGYCLDSLAEGAALTLRSLLGDPC 429
>gi|281339512|gb|EFB15096.1| hypothetical protein PANDA_005509 [Ailuropoda melanoleuca]
Length = 663
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YVS L +++ L Y +TF + AAGA + LV
Sbjct: 55 ASEAELGLVHSPEYVSLLRGTSALGTEELRALSGQYDAVYFHPSTFHCARLAAGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A+ N G AL+RPPGHH+ GFCVF NVA+AA++AQ+ HGL R+ I
Sbjct: 115 DAVLTGAAHN------GLALVRPPGHHSQRAAASGFCVFNNVALAAKHAQQRHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG GT F DDP + + S H+ Y D +GRG G G T+NLP
Sbjct: 169 VDWDVHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAIGRGQGRGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+L+SAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYMAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SLS SV +A LG+P+
Sbjct: 285 LTQLLQGLAGGRVCAVLEGGYHLESLSQSVCMVVKALLGDPA 326
>gi|195060356|ref|XP_001995788.1| GH17575 [Drosophila grimshawi]
gi|193896574|gb|EDV95440.1| GH17575 [Drosophila grimshawi]
Length = 1098
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 160/292 (54%), Gaps = 17/292 (5%)
Query: 11 EIIE-LKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
+++E +K P A+ D++ H RA+V+ + + R + L Y +TF
Sbjct: 558 QLVERMKPLQPRTATTDEVCLAHTRAHVNTVRRLAGRKPDELQQLGADYNSVYLHPSTFD 617
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+ AAGA + VDSV + R G +RPPGHHA P GFC+F NVAIAA+YA
Sbjct: 618 CATLAAGAVLQAVDSVMRGETRS----GICNVRPPGHHAESDHPHGFCIFNNVAIAAQYA 673
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRG 182
R + L+R+ I+D+DVHHGNGT F +P + ++S H ++G+ +P G D G+
Sbjct: 674 IREYQLERILIVDWDVHHGNGTQHIFESNPKVLYISVHRYENGAFFPKGPDGNYDVCGKN 733
Query: 183 DGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G G +N+P G GD F ++I+P A F P L+LVSAG+DA + DPL +
Sbjct: 734 AGCGFNVNIPWNKKGMGDVEYALAFQQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKV 793
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
T Y + + LA G R + LEGGYN+NS+SY++ + LG+P
Sbjct: 794 TPEGYGLFTHWLSALA----GGRIIVCLEGGYNVNSISYAMTMCTKTLLGDP 841
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/332 (34%), Positives = 178/332 (53%), Gaps = 22/332 (6%)
Query: 1 MELTSEFR-GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGII-LIEGSGP 58
ME E + ++LK+ A+ ++I +H+ + LE+ + + + L
Sbjct: 110 MERCRELKLVDRCLQLKS-RLATKEEILKLHSMEHYERLEQTSGVQNDEALEELSSHYDA 168
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
+ +TF+ SL A+G+ I LVD + K + G A+IRPPGHHA+ G+C F
Sbjct: 169 IFIHPSTFKLSLLASGSTIELVDQLLLGKAQN----GMAIIRPPGHHAMKSEFNGYCYFN 224
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK 175
NVA+AA++A A+ L+R+ IID+DVHHG GT FY+DP + + S H + GS +P +
Sbjct: 225 NVALAAQHAIDAYQLQRILIIDYDVHHGQGTQRFFYNDPRVLYFSIHRYEHGSFWPNLPE 284
Query: 176 ID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D +G G G G N+PL G G+ +F +++VP A F+P+LILVSAGYDA +
Sbjct: 285 SDFHAIGSGAGTGYNFNVPLNAKGMGNGDYLAIFQQLLVPVALEFQPELILVSAGYDAAL 344
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
P ++ T Y ++ L +R LEGGY ++SLS A + RA LG+
Sbjct: 345 GCPEGEMEVTPACY----PHLLNPLLPLANARIAVILEGGYCVDSLSEGAALTLRALLGD 400
Query: 293 PSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
P A P +L PS +++ A+ ++H
Sbjct: 401 PCPA--LVEPLLL---PSPELRTALLNCIYVH 427
>gi|312114713|ref|YP_004012309.1| histone deacetylase superfamily protein [Rhodomicrobium vannielii
ATCC 17100]
gi|311219842|gb|ADP71210.1| histone deacetylase superfamily [Rhodomicrobium vannielii ATCC
17100]
Length = 311
Score = 188 bits (477), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 152/270 (56%), Gaps = 11/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + I H RAY LE + ++ G T + +++ +L +AGA + V
Sbjct: 50 ATPEQIVRCHPRAYFDFLETHQPKTE----LVPLDDGDTMLSPGSWEAALRSAGAAVYAV 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + F L RPPGHHA MGFC+F N A+AA +A+ HG +RV ++D
Sbjct: 106 DEVMQKRATN----AFCLARPPGHHAEIAKAMGFCLFNNAAVAAFHAKAVHGAERVAVVD 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT F++ D+F+ STHQ +PGTG I E RG+ E + N PL G G
Sbjct: 162 FDVHHGNGTQAIFWNHADMFYASTHQMPLFPGTGGITE--RGEAE-NICNAPLRAGDGSD 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F V++P +RF PDL+++SAG+DAH DPLA+L + Y + + +A++
Sbjct: 219 EFREAFESVVLPSLRRFSPDLVIISAGFDAHRSDPLANLNLSEPDYAWVTRKLVDVARER 278
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
CG R V LEGGY+L++L S A + L
Sbjct: 279 CGGRVVSVLEGGYDLSALGQSAAAHVKILL 308
>gi|301763761|ref|XP_002917311.1| PREDICTED: histone deacetylase 10-like [Ailuropoda melanoleuca]
Length = 723
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/282 (39%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YVS L +++ L Y +TF + AAGA + LV
Sbjct: 55 ASEAELGLVHSPEYVSLLRGTSALGTEELRALSGQYDAVYFHPSTFHCARLAAGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A+ N G AL+RPPGHH+ GFCVF NVA+AA++AQ+ HGL R+ I
Sbjct: 115 DAVLTGAAHN------GLALVRPPGHHSQRAAASGFCVFNNVALAAKHAQQRHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG GT F DDP + + S H+ Y D +GRG G G T+NLP
Sbjct: 169 VDWDVHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAIGRGQGRGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+L+SAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYMAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SLS SV +A LG+P+
Sbjct: 285 LTQLLQGLAGGRVCAVLEGGYHLESLSQSVCMVVKALLGDPA 326
>gi|343429070|emb|CBQ72644.1| related to HDA1-histone deacetylase A [Sporisorium reilianum SRZ2]
Length = 737
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/277 (37%), Positives = 159/277 (57%), Gaps = 21/277 (7%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAM----DRASQQGIILIEGSGPTYATATTFQESLAA 72
N + D++ VH + G++++ D +Q ++++E + Y + + +
Sbjct: 129 NIREVAEDEVLLVHDKGIWDGVKRSALVHPDLLKEQ-VLMLESTSSLYVNEHSAYAARLS 187
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G I L D+VAA + + GFA++RPPGHHA P MGFC F NVA+A R+ R H
Sbjct: 188 CGGAIELCDAVAAGRIKN----GFAIVRPPGHHAEPHKSMGFCFFNNVAVATRHVMRQHD 243
Query: 133 -LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH---QDGS-YPGT--GKIDEVGRGDGE 185
+K+V I+D+DVHHGNGT AF DD D+ ++S H +DGS YPG+ G + VG G GE
Sbjct: 244 HIKKVLILDWDVHHGNGTQRAFEDDGDVLYISLHRYDEDGSFYPGSTYGHYESVGVGAGE 303
Query: 186 GSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G ++N+P P G GD FH +++P A F+PDL++VSAG+DA DP+ + + G
Sbjct: 304 GKSVNVPWPAPGMGDADYLYAFHHLVMPIAHEFQPDLVIVSAGFDAADGDPIGLNKVSPG 363
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ A + L LC + LEGGYN ++++ S
Sbjct: 364 GF----AQMTHLLTSLCQGKVAVVLEGGYNPDAVANS 396
>gi|85717534|ref|ZP_01048479.1| histone deacetylase superfamily protein [Nitrobacter sp. Nb-311A]
gi|85695651|gb|EAQ33564.1| histone deacetylase superfamily protein [Nitrobacter sp. Nb-311A]
Length = 309
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 149/270 (55%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S+D +A H Y++ L + G++ ++ T + T++ ++ G IA +
Sbjct: 51 SLDSVALCHNEHYIAELRHL---SPTNGLVYLDSD--TSMSPGTWEAAMRGVGGAIAATE 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V A D F RPPGHHA MGFC+F AIAAR+AQR HG+ RV ++DF
Sbjct: 106 AVIAG----DASNAFVATRPPGHHAETGRAMGFCLFDQAAIAARHAQRKHGIDRVAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PG+G E RGD + + +N PL G G
Sbjct: 162 DVHHGNGTQDIFWADRSVMYCSTHQMPLFPGSGASSE--RGDHD-TIVNAPLASGDGGAK 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R+ F +I+P ++F P+L+++SAG+DAH DPLA+L + + + +A
Sbjct: 219 FRSAFENLILPRLEKFAPELLVISAGFDAHSRDPLATLNLAASDFGWVTRKLMDIAHATA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L L SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLKGLQDSVAAHVAALMG 308
>gi|84685992|ref|ZP_01013888.1| Histone deacetylase family protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84666085|gb|EAQ12559.1| Histone deacetylase family protein [Rhodobacterales bacterium
HTCC2654]
Length = 311
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/226 (43%), Positives = 132/226 (58%), Gaps = 7/226 (3%)
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
+F ++ A G IA VD+V + + F + RPPGHHA PMGFC+F NVAIAA
Sbjct: 89 SFNAAMRAIGGNIAAVDAVLSGEASN----AFVMTRPPGHHAEKAKPMGFCLFANVAIAA 144
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
+A HGL RV ++DFDVHHGNGT D +++ + F S+HQ YPGTG +E G D
Sbjct: 145 LHAIEHHGLDRVAVLDFDVHHGNGTQDVLWNESGVRFASSHQMPLYPGTGAPNETGAYD- 203
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
N L GSG MR + E I+P + ++P LILVSAG+DAH DPLA L + T
Sbjct: 204 --QIRNAALDSGSGSQLMREAWGEHILPWIEDYEPQLILVSAGFDAHAADPLAGLNWRTE 261
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Y + I +A+ +C R V LEGGY+L++L+ A + +
Sbjct: 262 DYAWVTDRIVDVAEKVCEGRVVSSLEGGYDLDALAQGTAAHVKTLM 307
>gi|307183184|gb|EFN70093.1| Histone deacetylase 6 [Camponotus floridanus]
Length = 1165
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 159/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A++ +++ H++ Y+ +++ ++ Y T+ + +AG + +V
Sbjct: 575 ATLAELSLAHSKDYIDSIKRTSTLKPKELQKQASDYNSVYLHNETWSSACVSAGCLLKMV 634
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +++ G A++RPPGHHA GFC+F NVAIAA+YA + H LKRV I+D
Sbjct: 635 DAVLNGESQS----GIAIVRPPGHHAEEDNACGFCIFNNVAIAAQYAVQFHHLKRVLIVD 690
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +DP I ++S H+ +GS +P + + + VG GEG +N+P
Sbjct: 691 WDVHHGNGTQSIFEEDPKILYISVHRYDNGSFFPNSKRANYTSVGLNAGEGFNVNIPWNK 750
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD VF +V++P A +F P+LILVSAG+DA V DPL + Y L +
Sbjct: 751 KGMGDAEYIAVFQQVVMPIAYQFNPELILVSAGFDACVGDPLGGCLVSPELYGHLIHWLS 810
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+S+++ +A LG+P
Sbjct: 811 SLA----NGRIILSLEGGYNINSISHAMTMCTKALLGDP 845
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 122/226 (53%), Gaps = 11/226 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ ++I + H++ + L+ A + + L+ + +T++ SL A G+ I L
Sbjct: 162 ATENEILTKHSQKQIDILKATDGCADSENLELLSSKYDAVFVHPSTYKLSLLAVGSTINL 221
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V+S+ + + G A+IRPPGHHA+ G+C F NVAIA A ++ R+ I+
Sbjct: 222 VESICKGEIQN----GMAIIRPPGHHAMKSEYCGYCFFNNVAIAVEKALSSNLANRILIV 277
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGEGSTLNLPL- 193
D+DVHHG T FY+DP + + S H+ +P + D +G GEG N+PL
Sbjct: 278 DWDVHHGQATQQMFYNDPRVVYFSIHRYEYGEFWPNLKESDFHYIGEDLGEGYNFNIPLN 337
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G + +F +V++P A F+PDLI+VSAGYDA + P +L
Sbjct: 338 KTGMTNADYIAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEVNL 383
>gi|92116390|ref|YP_576119.1| histone deacetylase superfamily protein [Nitrobacter hamburgensis
X14]
gi|91799284|gb|ABE61659.1| histone deacetylase superfamily [Nitrobacter hamburgensis X14]
Length = 309
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 147/270 (54%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S+D +A H Y+ L R+ +G++ ++ T + T++ + G IA +
Sbjct: 51 SLDSVALCHNEHYIGELRH---RSPAEGLVYLDSD--TSMSPGTWEAVMRGVGGAIAATE 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V A + F RPPGHHA MGFC F AIAAR+AQR HG+ RV ++DF
Sbjct: 106 AVIAG----NASNAFVATRPPGHHAETGRAMGFCFFDQAAIAARHAQRKHGIGRVAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PG+G E RGD + + +N PL G G
Sbjct: 162 DVHHGNGTQDIFWADRTVMYCSTHQMPLFPGSGASGE--RGDHD-TIVNAPLASGDGGAK 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R+ F +I+P + F P+L+++SAG+DAH DPLASL + + + +A
Sbjct: 219 FRSAFENLILPRLETFAPELLVISAGFDAHSRDPLASLNLDADDFGWVTRKLMDIADATA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGYNL L SVA A +G
Sbjct: 279 GGRIVSVLEGGYNLQGLQESVAAHVTALMG 308
>gi|76800813|ref|YP_325821.1| histone deacetylase [Natronomonas pharaonis DSM 2160]
gi|76556678|emb|CAI48250.1| HdaI-type histone deacetylase [Natronomonas pharaonis DSM 2160]
Length = 336
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 167/317 (52%), Gaps = 21/317 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E ++ A D I +VH YV+ +E M A G T A T++ +LA+
Sbjct: 38 VEYRDGRLAERDAIEAVHDADYVADIEAFM--ADGGGTW----DADTVAVEETWEAALAS 91
Query: 73 AGAGIALVD-SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AG VD ++ + R P FA+ RPPGHHA MGFC F N A+A + A A
Sbjct: 92 AGLASWAVDEAIGGADGRQTP---FAIGRPPGHHAEIDEAMGFCFFNNAAVAVQQALDAE 148
Query: 132 --GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL 189
G+ I D+DVHHGNGT D FYD D+F+ S H+ G +PGTG + E G D + L
Sbjct: 149 DSGVDSAVIFDWDVHHGNGTQDIFYDSDDVFYASIHERGLFPGTGDVLETGGPDARNTIL 208
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLPGGSGD R V +++ P RF+PDL +VSAG+DAH DP++ ++ TT Y L
Sbjct: 209 NVPLPGGSGDAEYRAVMEQLLRPALDRFEPDLFVVSAGFDAHKHDPISRMRVTTEGYGYL 268
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
A ++ +A D + F LEGGY L+ L+ SV F G P +
Sbjct: 269 TATVRDIAAD-HDAPLAFVLEGGYGLDPLADSVGIVHEIFDGR--------EPMEPGGDV 319
Query: 310 SAKVKQAIERVKHIHSL 326
+K K+ I V+ H L
Sbjct: 320 RSKSKRVINDVRDAHDL 336
>gi|221198226|ref|ZP_03571272.1| histone deacetylase family protein [Burkholderia multivorans CGD2M]
gi|221209192|ref|ZP_03582184.1| histone deacetylase family protein [Burkholderia multivorans CGD2]
gi|221170930|gb|EEE03385.1| histone deacetylase family protein [Burkholderia multivorans CGD2]
gi|221182158|gb|EEE14559.1| histone deacetylase family protein [Burkholderia multivorans CGD2M]
Length = 373
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ +D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDMRGAAPAAREDLLRIHPAGYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIAAVDAVVDERAAN----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDD D +S HQD + PG G ++ G G G G+ LN
Sbjct: 170 GIGRVAVIDWDVHHGNGTQSIYYDDADTLTISLHQDRCFPPGYGGAEDRGAGAGIGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI+V++G DA +DPLA + T +Y +
Sbjct: 230 VPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|421590224|ref|ZP_16035259.1| deacetylase [Rhizobium sp. Pop5]
gi|403704661|gb|EJZ20474.1| deacetylase [Rhizobium sp. Pop5]
Length = 311
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAM----DRASQQGIILIEGSGPTYATATTF 66
E +E + AS D + H ++ + + + DR +Q TYA+ +
Sbjct: 40 ERLERRQAPQASEDAVLLAHPEEHLIAVMREIPEEEDRINQL-------EADTYASQKSL 92
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
Q +L G +A VD V A R D F RPPGHHA MGFC F N AIAAR+
Sbjct: 93 QAALTGIGGAMAAVDDVFAG--RADNV--FVAARPPGHHAEKSTAMGFCFFNNAAIAARH 148
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
AQ+AHG +RV I+D+DVHHGNGT D F+DD + F STHQ YPGTG +E +
Sbjct: 149 AQKAHGAERVAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGTGAKEEKSK---HN 205
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+ +N PL G R F ++P F+PDLI++SAG+DAH DPLA + T +
Sbjct: 206 TIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQINLTGEDF 265
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ +LA +R V LEGGY+L L+ S
Sbjct: 266 DWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|386284480|ref|ZP_10061702.1| acetoin utilization protein [Sulfurovum sp. AR]
gi|385344765|gb|EIF51479.1| acetoin utilization protein [Sulfurovum sp. AR]
Length = 307
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 133/236 (56%), Gaps = 9/236 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T + +F + A GAG+ +D + + + F +RPPGHHA P MGFC+F
Sbjct: 80 TVCSVDSFDAARMAVGAGVVALDGIKSEEFE----RVFCAVRPPGHHARPAQAMGFCLFN 135
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N+AIAARYAQ G K+V I+DFDVHHGNGT D FY D +F+ S+HQ +PGTG + E
Sbjct: 136 NIAIAARYAQSI-GYKKVMIVDFDVHHGNGTQDTFYADDSVFYFSSHQAYIFPGTGAVSE 194
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G G G T N P+ G+ D+ + ++ + + F PD+ILVSAGYD H DPLA
Sbjct: 195 KGEGKGIGYTANFPVMAGTTDSELLDIYENDLPSLVKDFNPDIILVSAGYDLHESDPLAQ 254
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L TT +I + D VFFLEGGYN+N+L + + L S
Sbjct: 255 LNITTEG----IRDIVRCILDSADVPFVFFLEGGYNVNALGENAKVTLEEMLKSTS 306
>gi|259480794|tpe|CBF73762.1| TPA: Putative histone deacetylase
[Source:UniProtKB/TrEMBL;Acc:Q7Z8L7] [Aspergillus
nidulans FGSC A4]
Length = 766
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 161/313 (51%), Gaps = 23/313 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH A+ + +E D + ++ I L Y TF SL + G I
Sbjct: 188 ATEEEISLVHTAAHYAFVESTKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAIETC 247
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL--KRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV++AAR Q+ GL +++ I
Sbjct: 248 LAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMI 303
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H Q+GS YPG G D G G GEG +N+P
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD FH+V++P AQ F PDL+++++G+DA D L T Y A+
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACY----AH 419
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ + L + LEGGYN S+S S + +G P F PS
Sbjct: 420 MTHMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTC-------PSEA 472
Query: 313 VKQAIERVKHIHS 325
I RV I S
Sbjct: 473 AISTIRRVSSIQS 485
>gi|387130394|ref|YP_006293284.1| deacetylase [Methylophaga sp. JAM7]
gi|386271683|gb|AFJ02597.1| deacetylase [Methylophaga sp. JAM7]
Length = 330
Score = 187 bits (476), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/261 (40%), Positives = 144/261 (55%), Gaps = 25/261 (9%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+PA V ++++H+ + + +++ A YATA AAG +
Sbjct: 78 TPAKVRWLSTIHSIEHQASIKRHAPEA--------------YATARL------AAGGVLN 117
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKG-PMGFCVFGNVAIAARYAQRAHGLKRVF 137
VD+V K + F RPPGHHA G GFC F +VAIAARYAQ+ +GL+R+
Sbjct: 118 CVDAVMQEKVKN----AFCASRPPGHHATNTGREEGFCYFNHVAIAARYAQQQYGLERIL 173
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
I+D+D HHGNGT AFYDDP + F STH +YP TG + G G GEG +N+ LP GS
Sbjct: 174 IVDWDYHHGNGTEWAFYDDPSVLFFSTHDRDAYPRTGLPERTGHGAGEGFNINVHLPCGS 233
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
GD AM F E ++P A F P L+L+SAG+D+ V D L + T + L + Q+A
Sbjct: 234 GDAAMLAAFKEKLLPAANAFSPQLVLISAGFDSRVDDLLGCHEITDDGFKALTKMVMQIA 293
Query: 258 KDLCGSRCVFFLEGGYNLNSL 278
C R V LEGGY++ L
Sbjct: 294 ARHCQGRLVSVLEGGYHIPGL 314
>gi|433593271|ref|YP_007282757.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|448334832|ref|ZP_21523992.1| histone deacetylase superfamily protein [Natrinema pellirubrum DSM
15624]
gi|433308309|gb|AGB34119.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natrinema pellirubrum DSM 15624]
gi|445618636|gb|ELY72196.1| histone deacetylase superfamily protein [Natrinema pellirubrum DSM
15624]
Length = 339
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 160/270 (59%), Gaps = 9/270 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++ + +PA+ D I +VH YV+ E AS G T A +T++ SLA+
Sbjct: 38 VKYVDAAPATRDRILAVHDEDYVAEFESFC--ASGGG----NWDADTVAVESTWEASLAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + + PP F+L RPPGHHA+ MGFC F N+AIAA+
Sbjct: 92 AGLAEWAAKTALDQRTEQFPP--FSLGRPPGHHAVEDDAMGFCFFNNIAIAAQSVIDVGT 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
+RV IID+DVHHGNGT + FYDD +F++S H+DG YPGTG ++E G GDG G+TLN+P
Sbjct: 150 AERVAIIDWDVHHGNGTQEIFYDDGSVFYVSFHEDGLYPGTGFVEETGTGDGTGTTLNVP 209
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G+ + T EV+ P F PDL+LVSAG+DAH DP++ + +T Y +L
Sbjct: 210 FPPGTTEHGYLTAIDEVVGPELLAFDPDLLLVSAGFDAHRHDPISRMSVSTDGYGLLTQQ 269
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
++++A G+ F LEGGY+L++LS S+
Sbjct: 270 VRKIAVS-TGAGLGFVLEGGYSLDTLSESI 298
>gi|254467831|ref|ZP_05081237.1| histone deacetylase superfamily protein [beta proteobacterium KB13]
gi|207086641|gb|EDZ63924.1| histone deacetylase superfamily protein [beta proteobacterium KB13]
Length = 324
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 8/272 (2%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +IA H+ Y+ +E + RA +G T + + + + GA + +
Sbjct: 55 ASNSEIALAHSEKYIQLVENEI-RALDNDSPTFLSTGDTVISPISLDVAQMSVGASLVGI 113
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D + + + F+ RPPGHHA MGFC++ + AIAA+Y Q + L R+ IID
Sbjct: 114 DEIMSG----NVDAAFSFNRPPGHHATRDRGMGFCIYNHAAIAAKYLQMKYSLSRILIID 169
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D FYDDP +F+ S HQ YPG+G+ E G DGEG T N+ +P GSGD
Sbjct: 170 FDVHHGNGTQDIFYDDPSVFYFSIHQHPFYPGSGRPSETGISDGEGFTYNVEVPEGSGDE 229
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
F + ++P + F+P+ I++SAG+DAH D L L++T+ Y +A+ I +A
Sbjct: 230 RFIAAFKDDLLPKMKNFQPEFIIISAGFDAHKNDLLGKLKYTSSGYGKVASLINNIAFTS 289
Query: 261 CGSRCVFFLEGGY---NLNSLSYSVADSFRAF 289
++ LEGGY N+++ S ++ F
Sbjct: 290 NSKGIMYMLEGGYVPSNIDNASQAIIKELINF 321
>gi|260425813|ref|ZP_05779793.1| histone deacetylase 14 [Citreicella sp. SE45]
gi|260423753|gb|EEX17003.1| histone deacetylase 14 [Citreicella sp. SE45]
Length = 308
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 158/268 (58%), Gaps = 13/268 (4%)
Query: 15 LKNFSPASVD-DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
L+ +PA+ D DIA VH + Y+ +++A A +QG + ++ T+ + + Q + AA
Sbjct: 40 LRLAAPAASDADIARVHPQRYIDRIKRA---APEQGQVALDSD--TWVSPGSMQAARRAA 94
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
GA I VD+V + + F RPPGHHA + PMGFC+FGN A+AA+YA HGL
Sbjct: 95 GAAIRAVDAVMSREATN----AFCATRPPGHHAERETPMGFCLFGNAALAAKYALDHHGL 150
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
+RV ++DFDVHHGNGT D +D+ I F+S+ Q +PGTG E G D + +NLPL
Sbjct: 151 ERVAVVDFDVHHGNGTQDLLWDEERILFVSSQQFPLWPGTGAATETGAHD---NVVNLPL 207
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
GSG MR + P + F+P L+++SAG+DAH DPLA L + + L +
Sbjct: 208 RPGSGGPEMRDAYRGGAFPRLEAFEPQLMIISAGFDAHHDDPLAQLTWQAEDFRWLTHEL 267
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
++A C R V LEGGY+L +L+ S
Sbjct: 268 CRIATTHCRRRVVSVLEGGYDLAALAAS 295
>gi|71083166|ref|YP_265885.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|71062279|gb|AAZ21282.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1062]
Length = 309
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 145/262 (55%), Gaps = 13/262 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
H Y++ +EK+ ++G+ ++G T + + +L A G+ I +D V
Sbjct: 58 THNSDYINFVEKSF---PEKGLSFLDGD--TIVSPGSKDATLDAVGSIITAIDGVQ---- 108
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
D F +RPPGHHA MGFC++ NVA+ A Y + LK++ IIDFDVHHGNG
Sbjct: 109 NKDFKNAFCAVRPPGHHAEKNKAMGFCIYNNVAVGANYLINKYKLKKIAIIDFDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T D FYD+ + ++STHQ YPG+G DE G+ + LN+PLP G+ + E
Sbjct: 169 TQDIFYDNEKVLYISTHQYPYYPGSGTNDEKGK---HNNILNIPLPAGTTSEEYLNAY-E 224
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
++ + FKP+ IL+SAG+DAH DPLA LQ + +Y + +L+K C + V
Sbjct: 225 FVLNKIKEFKPEFILLSAGFDAHKDDPLAQLQLESKDFYNITKRTLELSKQYCDGKVVSI 284
Query: 269 LEGGYNLNSLSYSVADSFRAFL 290
LEGGY+L +L S +A L
Sbjct: 285 LEGGYDLQALQESTEMHVKALL 306
>gi|33115101|gb|AAP95013.1|AF306859_1 putative histone deacetylase [Emericella nidulans]
Length = 782
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 161/313 (51%), Gaps = 23/313 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH A+ + +E D + ++ I L Y TF SL + G I
Sbjct: 188 ATEEEISLVHTAAHYAFVESTKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAIETC 247
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL--KRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV++AAR Q+ GL +++ I
Sbjct: 248 LAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMI 303
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H Q+GS YPG G D G G GEG +N+P
Sbjct: 304 LDWDVHHGNGIQKAFYDDPNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPW 363
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD FH+V++P AQ F PDL+++++G+DA D L T Y A+
Sbjct: 364 PSQGMGDGDYIYAFHQVVMPIAQEFDPDLVIIASGFDAAAGDTLGGCFVTPACY----AH 419
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ + L + LEGGYN S+S S + +G P F PS
Sbjct: 420 MTHMLMTLAQGKVAVCLEGGYNFRSISKSALAVTKTLMGNPPDRLSFTC-------PSEA 472
Query: 313 VKQAIERVKHIHS 325
I RV I S
Sbjct: 473 AISTIRRVSSIQS 485
>gi|432091618|gb|ELK24640.1| Histone deacetylase 10 [Myotis davidii]
Length = 635
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 144/244 (59%), Gaps = 18/244 (7%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
T A +TF + AAGAG+ LVD+V A N G AL+RPPGHH+ GFCV
Sbjct: 37 TSAPQSTFHSARLAAGAGLQLVDAVLTGAVHN------GLALVRPPGHHSQRAAANGFCV 90
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT 173
F NVAIAAR+AQ+ HGL R+ I+D+D+HHG GT F DDP + + S H + G +P
Sbjct: 91 FNNVAIAARHAQQKHGLHRILIVDWDIHHGQGTQYTFEDDPSVLYFSWHRYEHGRFWPYL 150
Query: 174 GKID--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
+ D VG+G G G T+NLP G G+ F V++P A F P L+LVSAG+D+
Sbjct: 151 QESDAVAVGQGRGRGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPQLVLVSAGFDS 210
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ DP +Q T + A++ QL + L G R LEGGYNL SLS SV + +A L
Sbjct: 211 AIGDPEGQMQATPECF----AHLTQLLRVLAGGRVCAMLEGGYNLESLSESVCMTVQALL 266
Query: 291 GEPS 294
G+P+
Sbjct: 267 GDPA 270
>gi|20094491|ref|NP_614338.1| deacetylase [Methanopyrus kandleri AV19]
gi|19887593|gb|AAM02268.1| Predicted deacetylase [Methanopyrus kandleri AV19]
Length = 352
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 118/318 (37%), Positives = 165/318 (51%), Gaps = 17/318 (5%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E I+L P + I VH +V + + R S+ G +I+ T T+ ++L
Sbjct: 41 EGIDLVEPDPVDREVIELVHDPEHV----ELIRRMSESGGGMIDLD--TAVAPETYDQAL 94
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG + V+ V R + FA++RPPGHHA GFC F N AIAA YA R
Sbjct: 95 LAAGGSVLAVELVV----RGEYDTAFAMVRPPGHHAGRAKAAGFCYFNNAAIAAEYAIRE 150
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGST 188
G+ V I+D+D HHG+GT + FYD D+ ++S HQDG YPGTG E G G GEG T
Sbjct: 151 LGVDSVAILDWDAHHGDGTQEIFYDRDDVLYVSIHQDGRTLYPGTGFPYEAGEGPGEGYT 210
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+ SGD R F ++ P + F PDLIL+SAG D H DP+ L T Y
Sbjct: 211 VNIPVLPRSGDRTYREAFQRIVEPVVREFDPDLILISAGQDCHFTDPITDLAVTAEGYRW 270
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNL-NSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+ +LA+DL S V LEGGY++ + L Y+ G P+ E +P +
Sbjct: 271 MMQRATELAEDLGASGPVAVLEGGYSVEDGLPYTNLGVVCGMAGVPADLREPMDP----Q 326
Query: 308 EPSAKVKQAIERVKHIHS 325
E + + + + +V HS
Sbjct: 327 EENPRGPEGVRKVAREHS 344
>gi|15607064|ref|NP_214446.1| acetoin utilization protein [Aquifex aeolicus VF5]
gi|2984320|gb|AAC07842.1| acetoin utilization protein [Aquifex aeolicus VF5]
Length = 310
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 149/271 (54%), Gaps = 13/271 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A V+++A H AY+ ++ D G L TYAT T+ +L A G + +
Sbjct: 51 AKVEEVALNHDPAYI---QEIHDFCKSGGGYL---DPDTYATPDTYDVALYAVGGVLEGI 104
Query: 81 DSVAASK-NRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
D + + + +R F +RPPGHHA MGFC+F NVAI A Y ++ G+ +VFII
Sbjct: 105 DRILSGELDR-----AFCAVRPPGHHAEYAKAMGFCIFNNVAIGAHYLRKIKGVNKVFII 159
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFD HHGNGT +FY+D +F+ STH+ YPGTG DE G G G G T N+P+ G+GD
Sbjct: 160 DFDAHHGNGTQKSFYEDDTVFYFSTHEYPFYPGTGSEDERGAGKGYGYTYNVPMSAGAGD 219
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
V+ +++ RF PD +LVSAGYD H DPL L + + NI + + +
Sbjct: 220 DEYIPVYEKLLPELMNRFSPDFVLVSAGYDLHRDDPLTYLNVSNEGVRQIVRNIIKTSDE 279
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L + +F LEGGYNL +L V + L
Sbjct: 280 L-NAPVLFALEGGYNLKALGECVVITLEEML 309
>gi|260785050|ref|XP_002587576.1| hypothetical protein BRAFLDRAFT_95716 [Branchiostoma floridae]
gi|229272725|gb|EEN43587.1| hypothetical protein BRAFLDRAFT_95716 [Branchiostoma floridae]
Length = 1056
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 151/266 (56%), Gaps = 21/266 (7%)
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
T++ + AAG + V++VA R A++RPPGHHA P GFC+F + A+AA
Sbjct: 563 TYKSACLAAGCSMNAVEAVATGSVRS----AVAVVRPPGHHAEVDKPCGFCIFNSAALAA 618
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EV 179
R+AQ+ G+ RV I+D+D+HHGNGT F DDP + ++S H+ + +PG+ D V
Sbjct: 619 RFAQKRLGVGRVLILDWDIHHGNGTQHMFVDDPTVLYISIHRYDNGMFFPGSPDADCTVV 678
Query: 180 GRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G GEG T+N+P GG GD F +V++P A + P+L+++SAG+DA DPL
Sbjct: 679 GSGPGEGFTVNVPWSRGGMGDPEYMAAFQQVVMPIAYEYSPELVIISAGFDAARGDPLGH 738
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
T Y A++ + L G R V LEGGYNL+S+S S+++ + LG+P
Sbjct: 739 CDVTPPGY----AHMTHMLSSLAGGRVVLLLEGGYNLSSISESMSECTKILLGDPC---- 790
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIH 324
P + Y P + Q++ H+H
Sbjct: 791 ---PPLEYSPPCEEAVQSMLSTLHVH 813
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 124/233 (53%), Gaps = 10/233 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ +++ S+H+ + LE ++ + Q L E + + + +AG + L
Sbjct: 193 PATREEVLSIHSEGLLGKLESSVTMTTDQLRQLSETFEDIAIHPKSLECARLSAGCTLQL 252
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+D V R G A++RPPGHHA G+C+F N+AIAAR A + L+RV I+
Sbjct: 253 MDQVLTGNVRN----GMAVVRPPGHHADRDQSCGYCLFNNIAIAARQALTKYSLERVLIV 308
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKIDE--VGRGDGEGSTLNLPLP 194
D+DVH GNGT D FYDDP + F S H+ +P + + VGRG G+G +N+P
Sbjct: 309 DWDVHFGNGTQDLFYDDPRVLFFSIHRYEHMEYWPHMERANYSFVGRGAGKGYNVNVPWN 368
Query: 195 G-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
G GD F +V++P A F P L+LVSAG+D+ V D + + Y
Sbjct: 369 KIGLGDPDYMAAFQQVLMPMAYEFDPQLVLVSAGFDSAVGDRMGKMVLMPMAY 421
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 80/144 (55%), Gaps = 10/144 (6%)
Query: 170 YPGTGKID--EVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSA 226
+PG+ D VG G GEG T+N+P GG GD F +V++P A + P+L+++SA
Sbjct: 858 FPGSPDADCTVVGSGPGEGFTVNVPWSRGGMGDPEYMAAFQQVVMPIAYEYSPELVIISA 917
Query: 227 GYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSF 286
G+DA DPL T Y A++ + L G R V LEGGYNL+S+S S+A+
Sbjct: 918 GFDAARGDPLGHCDVTPPGY----AHMTHMLSSLAGGRVVLLLEGGYNLSSISESMAECT 973
Query: 287 RAFLGEPSKASEFDNPAILYEEPS 310
+ LG+P E+ P EEP+
Sbjct: 974 KILLGDPCPPLEYSPPC---EEPA 994
>gi|163783701|ref|ZP_02178688.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159881026|gb|EDP74543.1| acetoin utilization protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 309
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 132/232 (56%), Gaps = 6/232 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA ++ +L A G + +D + F +RPPGHHA MGFC+F
Sbjct: 82 TYANEHSYDVALTAVGGVLEGIDLILKGSIE----TAFCAVRPPGHHAEYAKAMGFCLFN 137
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVA+ ARY R G+ +VFIIDFD HHGNGT +FY D +F+ STH+ YPGTG E
Sbjct: 138 NVAVGARYL-RKKGVDKVFIIDFDAHHGNGTQRSFYQDDSVFYFSTHEYPFYPGTGSAQE 196
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G GEG TLN+P+ G+GD R V+ +++ + F PD +LVSAGYD H DPL
Sbjct: 197 KGAGKGEGYTLNVPMQAGAGDEDYRPVYEKLLPKVMEDFSPDFVLVSAGYDLHSDDPLTY 256
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L +T M+ +I + + L G +F LEGGYNL +L SV + L
Sbjct: 257 LDVSTEGVRMIVKSILKTCRKL-GVPSLFALEGGYNLKALGESVGVTVEEML 307
>gi|222147756|ref|YP_002548713.1| deacetylase [Agrobacterium vitis S4]
gi|221734744|gb|ACM35707.1| deacetylase [Agrobacterium vitis S4]
Length = 311
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 129/225 (57%), Gaps = 11/225 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TYA+ + Q +L A G +A VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYASQKSLQCALTAIGGAMAAVDDVMTGAADNV------FVAGRPPGHHAEKTKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F +AIAAR+AQ+ +G++RV I+D+DVHHGNGT D F+DDP + F STHQ YP TGK
Sbjct: 139 FNTIAIAARHAQQVYGVERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPWTGKK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
DEVG + +N PL SG R F ++ F PDLIL+SAG+DAH DPL
Sbjct: 199 DEVG---PHNTIVNAPLSANSGSDHFREAFKSRVLTALNDFSPDLILISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A + + + ++A +R V LEGGY+L L+ S
Sbjct: 256 AQINLVGEDFDWATGRLMEVADRFAKNRVVSLLEGGYDLEGLAES 300
>gi|402490055|ref|ZP_10836846.1| histone deacetylase superfamily protein [Rhizobium sp. CCGE 510]
gi|401810999|gb|EJT03370.1| histone deacetylase superfamily protein [Rhizobium sp. CCGE 510]
Length = 311
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 147/273 (53%), Gaps = 10/273 (3%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E +E + AS D + H ++ + + + ++G I + TYA+ + Q +L
Sbjct: 40 ERLERRQAPQASEDAVLLAHPEEHLLAVMREI--PEEEGEI-NQLEADTYASPKSLQAAL 96
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
G +A VD V + R D F RPPGHHA MGFC F N AIAAR+AQ+
Sbjct: 97 TGIGGAMAAVDDVFSG--RADNV--FVAARPPGHHAEKTTAMGFCFFNNAAIAARHAQKT 152
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
HG +R+ I+D+DVHHGNGT D F+DD + F STHQ YPGTG +E G+ + +N
Sbjct: 153 HGAERIAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGTGAKEEKGK---HNTIVN 209
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
PL G R F ++P F+PDLI++SAG+DAH DPLA + T +
Sbjct: 210 APLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQINLTGEDFDWAT 269
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ +LA +R V LEGGY+L L+ S A
Sbjct: 270 GRVLELADRHAKNRVVSLLEGGYDLEGLAESAA 302
>gi|75674833|ref|YP_317254.1| histone deacetylase superfamily protein [Nitrobacter winogradskyi
Nb-255]
gi|74419703|gb|ABA03902.1| histone deacetylase superfamily [Nitrobacter winogradskyi Nb-255]
Length = 309
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/270 (38%), Positives = 148/270 (54%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S+D +A H Y++ L + + G+I ++ T + T++ +L G IA +
Sbjct: 51 SLDSVALCHNEHYIAELRHL---SPENGLIYLDSD--TSMSPGTWEAALRGVGGAIAATE 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V A F RPPGHHA MGFC+F AIAAR+AQR HG+ RV ++DF
Sbjct: 106 AVIAGHASN----AFVATRPPGHHAETGRAMGFCLFDQAAIAARHAQRKHGIDRVAVVDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D F+ D + + STHQ +PG+G E RGD + + +N P+ G G
Sbjct: 162 DVHHGNGTQDIFWADRSVMYCSTHQMPLFPGSGASSE--RGDHD-TIVNAPMASGDGGAR 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F +I+P ++F P+L ++SAG+DAH DPLA+L + + + +A
Sbjct: 219 FRAAFENLILPRLRKFAPELFVISAGFDAHSRDPLATLNLAASDFEWVTRKVMDVADATA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L +L SVA A +G
Sbjct: 279 GGRIVSVLEGGYDLKALGESVAAHVAALMG 308
>gi|89069934|ref|ZP_01157267.1| histone deacetylase family protein [Oceanicola granulosus HTCC2516]
gi|89044488|gb|EAR50616.1| histone deacetylase family protein [Oceanicola granulosus HTCC2516]
Length = 308
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/261 (40%), Positives = 150/261 (57%), Gaps = 12/261 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ VH R ++S L+ A+ + + + T+ + + + AAGA + V
Sbjct: 47 AADDDLLRVHPRVHLSALKSALPDSGWRTL-----DADTHLSPGSLAAAYRAAGAVVKAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + FA +RPPGHHA + PMGFC+FG+VA+ A+ A HGLKRV ++D
Sbjct: 102 DMVLSGEVAN----AFAAVRPPGHHAERETPMGFCLFGSVAVGAKVALDHHGLKRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D D+P F STHQ YPGTG E G D + +N+PL G+ T
Sbjct: 158 FDVHHGNGTQDLLEDEPRALFCSTHQMPLYPGTGFAHETGPHD---TIVNVPLDEGAAGT 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A R +++P F+P+LI+VSAG+DAH DPLA LQ + + + LA
Sbjct: 215 AFRDAMERLVLPRVDAFRPELIIVSAGFDAHADDPLAGLQLVEDDFAWITHQLCDLADAH 274
Query: 261 CGSRCVFFLEGGYNLNSLSYS 281
CG + V LEGGY+L++L S
Sbjct: 275 CGGKVVSALEGGYDLDALGRS 295
>gi|163761051|ref|ZP_02168129.1| hypothetical protein HPDFL43_03409 [Hoeflea phototrophica DFL-43]
gi|162281832|gb|EDQ32125.1| hypothetical protein HPDFL43_03409 [Hoeflea phototrophica DFL-43]
Length = 308
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 150/280 (53%), Gaps = 21/280 (7%)
Query: 12 IIELKNFSP--------ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
+ E +NF+P A+ + + +VH Y LE+ + G+ I+ T A
Sbjct: 33 VFEHENFNPLVRHLAPEAAAETVLTVHPENY---LERIRSTIPESGMARIDED--TVAGP 87
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
+ +L + G +A VD+V + F RPPGHHA MGFC+F AIA
Sbjct: 88 RAMEAALISVGGAMAAVDAVFGGQADN----AFVATRPPGHHAEINRSMGFCLFNQAAIA 143
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
AR+AQ+A+G +RV I+D+DVHHGNGT D FYDD + +LSTHQ YPGTG + E G+G+
Sbjct: 144 ARHAQKAYGAERVAIVDWDVHHGNGTQDIFYDDASVVYLSTHQMPLYPGTGALRETGKGN 203
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
N PL G R F I+P + + DLI++SAG+DAH DPLA + T
Sbjct: 204 ----IFNAPLSVNDGSDHFREAFKTRILPALEEARADLIIISAGFDAHHRDPLAEINLTA 259
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ + ++A G+R V LEGGY+L L+ S A
Sbjct: 260 DDFDWATGKVMEIAGRTAGNRVVSLLEGGYDLVGLAESAA 299
>gi|350400444|ref|XP_003485837.1| PREDICTED: histone deacetylase 6-like [Bombus impatiens]
Length = 1173
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/279 (35%), Positives = 160/279 (57%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH++ Y+ ++ + ++ E Y T+ + + G+ + +V
Sbjct: 597 ATREELILVHSKEYIDSIKDTENLNPKELKRQAENYNSVYLHPETWTSACISTGSLLQVV 656
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV +++ G A++RPPGHHA GFC+F N+A+AARYA H +KRV I+D
Sbjct: 657 DSVLNGESQS----GIAIVRPPGHHAAENTACGFCIFNNIAVAARYAVEFHHVKRVLIVD 712
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +DP I ++S H+ +G+ +P + + + VG GEG T+N+P
Sbjct: 713 WDVHHGNGTQSIFEEDPKILYMSVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNK 772
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A +F P+L+LVSAG+DA + DPL T Y L +
Sbjct: 773 KGMGDAEYIAAFQQIIMPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLS 832
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+++++A ++ LG+P
Sbjct: 833 SLA----NGRIILSLEGGYNINSVAHAMAICTKSLLGDP 867
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 17/281 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS--GPTYATATTFQESLAAAGAGIA 78
AS D+I H++ + L KA D + + + S Y +T+Q SL A G+ I
Sbjct: 169 ASEDEILMKHSQEQIDIL-KATDECTDIDSLELLSSTYDAIYIHPSTYQLSLLAVGSTIN 227
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
LV+S+ + + G A+IRPPGHHA+ G+C F NVAIAA ++ ++ I
Sbjct: 228 LVESIC----KEEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEKVLSSNLASKILI 283
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+D+HHG T FY+DP + + S H ++G +P VG G GEG N+PL
Sbjct: 284 VDWDIHHGQATQQMFYNDPRVIYFSIHRYENGEFWPNLRESNFHFVGDGLGEGYNFNVPL 343
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G + +F +V++P A F+PDLI+VSAGYDA + P + T Y A+
Sbjct: 344 NKTGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEGEMLLTPACY----AH 399
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ L + LEGGY L SL+ S A + R LG+P
Sbjct: 400 LLSSLLSLASGKVAVILEGGYCLKSLAESAALTLRTLLGDP 440
>gi|325969238|ref|YP_004245430.1| histone deacetylase superfamily protein [Vulcanisaeta moutnovskia
768-28]
gi|323708441|gb|ADY01928.1| histone deacetylase superfamily [Vulcanisaeta moutnovskia 768-28]
Length = 348
Score = 186 bits (473), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/262 (39%), Positives = 149/262 (56%), Gaps = 21/262 (8%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
+ VH YV + +D A G + I+ TY + T + + A GA + VD V +
Sbjct: 50 LLKVHDEDYV----RRIDEACDMGYVFIDAD--TYVSPGTCKAARLAVGAVLKGVDKVLS 103
Query: 86 SKNRPDPPLGFALIRPPGHH------AIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+ +A++RPPGHH A+ GFC+F NV + A YA HG +V I+
Sbjct: 104 G----EWGTAYAVVRPPGHHVGRSGRALMAPTQGFCIFNNVVVGAVYALE-HGFNKVVIL 158
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
D DVHHGNGT + FY+DP + ++S HQD YPGTG ID+VG G+GEG +N+PLP +
Sbjct: 159 DVDVHHGNGTQEIFYEDPRVLYVSLHQDPLTIYPGTGFIDDVGEGEGEGFNVNVPLPPFT 218
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D A V+ P + F+P LILVS G+DAH+LD +A+L+ + TY + ++ +
Sbjct: 219 ADDAYMNALDRVVWPIIEEFRPQLILVSLGFDAHMLDSIANLRLSLNTYAYVFRRLRNMI 278
Query: 258 KDLCGSRCVFFLEGGYNLNSLS 279
+ G VF LEGGYN ++LS
Sbjct: 279 GKVRG--VVFVLEGGYNSDTLS 298
>gi|146278822|ref|YP_001168981.1| histone deacetylase superfamily protein [Rhodobacter sphaeroides
ATCC 17025]
gi|145557063|gb|ABP71676.1| histone deacetylase superfamily [Rhodobacter sphaeroides ATCC
17025]
Length = 307
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/260 (40%), Positives = 149/260 (57%), Gaps = 14/260 (5%)
Query: 16 KNFSPASVD-DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG 74
+ ++P + D ++ H ++++ + +A +GI+ ++ T+ + +F+ ++ A G
Sbjct: 41 RRYAPMAADAEVLRCHPQSHLDRIRRA---EPVEGIVGLDPD--TWMSPGSFEAAMRAVG 95
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
A VD V A + F RPPGHHA + PMGFC+FG+VAIAAR A HGL
Sbjct: 96 GTCAAVDLVLAGEASS----AFVGCRPPGHHAEREKPMGFCLFGSVAIAARRALDHHGLG 151
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
RV ++DFDVHHGNGT D +D+ F+S+HQ YPGTG DE G G LNLPL
Sbjct: 152 RVAVVDFDVHHGNGTQDLLWDEGRALFVSSHQMPLYPGTGAADERG---AHGQILNLPLA 208
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
GSG MR + E + ++P+LIL+SAG+DAH DPLA+L + + L +
Sbjct: 209 PGSGSAEMREAW-EAAFRRIEDWQPELILISAGFDAHAADPLANLNWREEDFRWLTGRLC 267
Query: 255 QLAKDLCGSRCVFFLEGGYN 274
LA CG R V LEGGY+
Sbjct: 268 DLAAASCGGRVVSTLEGGYD 287
>gi|335440022|ref|ZP_08561746.1| histone deacetylase superfamily protein [Halorhabdus tiamatea
SARL4B]
gi|334889190|gb|EGM27480.1| histone deacetylase superfamily protein [Halorhabdus tiamatea
SARL4B]
Length = 336
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 131/225 (58%), Gaps = 9/225 (4%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FAL RPPGHHA+ MGFC N A+AA +A ++ V I+DFDVHHGNGT D FYD
Sbjct: 113 FALGRPPGHHAVEDDAMGFCFLNNAAVAAEHALDREDVENVAILDFDVHHGNGTQDIFYD 172
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D+++ S H++G YPGTG + E G G G TLN+P P GSGD V+ EVI P +
Sbjct: 173 RSDVYYASFHEEGLYPGTGDVGETGVDAGRGRTLNVPFPSGSGDADYLAVYEEVIAPEFE 232
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
+ PDL++VSAG+DAH DP++ + +TG Y +LA ++ L D + F LEGGY L
Sbjct: 233 AYDPDLLIVSAGFDAHENDPISRMLVSTGGYGVLAERLRTLT-DRIDAGLAFVLEGGYGL 291
Query: 276 NSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERV 320
+LS V + G PA + EP+ + +E +
Sbjct: 292 ETLSSGVREIQEVLNGT--------EPATIDAEPTDGGRNVLESL 328
>gi|388582703|gb|EIM23007.1| hypothetical protein WALSEDRAFT_59725 [Wallemia sebi CBS 633.66]
Length = 697
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 152/252 (60%), Gaps = 16/252 (6%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y T +L +AG+ + L +V + R GFA++RPPGHHA P+ MGF F N
Sbjct: 147 YVNPMTTYAALLSAGSLLELTKAVCDERIRN----GFAIVRPPGHHAEPEQMMGFSFFNN 202
Query: 120 VAIAARYAQRAH--GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT- 173
+IAAR+AQ+ + +KRV I+D+DVHHGNGT AFYDDP + ++S H ++G+ YPG+
Sbjct: 203 ASIAARWAQKNYPNSVKRVLILDWDVHHGNGTQRAFYDDPSVLYISLHRYENGTFYPGSD 262
Query: 174 -GKIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH 231
G ++ G G GEG ++N+P P G GD F++V++P +Q F PDL+++SAGYDA
Sbjct: 263 FGGMNMTGSGAGEGFSVNIPWPHAGMGDPEYLQAFNQVVMPISQEFAPDLVIISAGYDAA 322
Query: 232 VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ DPL T Y + + LA G + V LEGGYNL+S++ S + + LG
Sbjct: 323 INDPLGENLITPLGYAQMTHQLSSLA----GGKMVVALEGGYNLDSIATSATSTTQTLLG 378
Query: 292 EPSKASEFDNPA 303
E + F++ A
Sbjct: 379 EIPPQAPFNSVA 390
>gi|433605247|ref|YP_007037616.1| hypothetical protein BN6_34450 [Saccharothrix espanaensis DSM
44229]
gi|407883100|emb|CCH30743.1| hypothetical protein BN6_34450 [Saccharothrix espanaensis DSM
44229]
Length = 548
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 143/258 (55%), Gaps = 17/258 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE---SLAAAGAG 76
PA+ ++I VH +++ L KA D +T F +A AG
Sbjct: 249 PATDEEILLVHTPGHLARLTKANDTGGDG-----------GDGSTPFGRGGLDIARLAAG 297
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
A+ + A + + D +AL+RPPGHHA+P MGFC+ N+AIA R +R H + RV
Sbjct: 298 GAIRAAEAVLEGKVDN--AYALVRPPGHHAVPDSGMGFCMLANIAIALRAVRRTHNVARV 355
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPG 195
++D DVHHGNGT F++DP++ LS HQD + P +G + E G G G G TLNLPLP
Sbjct: 356 AVVDIDVHHGNGTQTVFWEDPNVLALSLHQDRFFPPNSGFVTERGAGAGFGYTLNLPLPP 415
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
G+G V++P +RFKPDLI+V+AG+DA+ LDPL + T Y +A +
Sbjct: 416 GTGTGGYLEATRRVVLPALRRFKPDLIVVAAGFDANALDPLGRMMLTPRAYREMARMVLD 475
Query: 256 LAKDLCGSRCVFFLEGGY 273
A DLC R + EGGY
Sbjct: 476 AAADLCDGRVLCVHEGGY 493
>gi|409436328|ref|ZP_11263512.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
gi|408751885|emb|CCM74664.1| conserved hypothetical protein [Rhizobium mesoamericanum STM3625]
Length = 311
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 127/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ +F+ +L G +A VD V K F RPPGHHA MGFC F
Sbjct: 85 TYASRKSFEAALTGIGGAMAAVDDVFTGKADN----VFVAGRPPGHHAEKTAAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQR +G +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG +E
Sbjct: 141 NAAIAARHAQRVYGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGAKEE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G+ G+ +N PL G R F ++P F+PDLI++SAG+DAH DPLA
Sbjct: 201 SGK---HGTIVNAPLSPNVGSDHFREAFKSRVLPALFDFRPDLIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + ++A +R V LEGGY+L L+ S
Sbjct: 258 INLVGEDFDWATGRLLEVADQSAANRVVSLLEGGYDLEGLAES 300
>gi|399910612|ref|ZP_10778926.1| histone deacetylase superfamily protein [Halomonas sp. KM-1]
Length = 375
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/268 (41%), Positives = 150/268 (55%), Gaps = 21/268 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E++ PAS +D+A H Y+ LE+ DR G A SLAA
Sbjct: 61 LEVRKAPPASREDLARFHTGRYLDELEEG-DRTC---------GGDAGECAPYTPGSLAA 110
Query: 73 A----GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
A G IA V++VA + P +AL RPPGHHA GFC+ GN+ +A +A
Sbjct: 111 ARQSAGLAIAAVEAVAGGEL----PNAYALCRPPGHHAEADRGRGFCLLGNIPVAVMHA- 165
Query: 129 RAHGL-KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEG 186
RA GL +RV I+D+DVHHGNG AFYDDPD+ +S HQ G+YP TG DE+G G G G
Sbjct: 166 RALGLVRRVAILDWDVHHGNGQQAAFYDDPDVLTVSIHQAGNYPLDTGDFDELGEGAGLG 225
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+ LNLP+P GSG A R E+++P F PDLI+V+ GYDA DPL + + +
Sbjct: 226 ANLNLPMPPGSGIGAYRYAMQELVLPAIGDFAPDLIVVACGYDACGKDPLGKMMLNSSAF 285
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ +K LA+ + G + V EGGY+
Sbjct: 286 AAMTQQLKDLAERISGGKLVMIHEGGYS 313
>gi|254502225|ref|ZP_05114376.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
gi|222438296|gb|EEE44975.1| Histone deacetylase family, putative [Labrenzia alexandrii DFL-11]
Length = 314
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 143/269 (53%), Gaps = 13/269 (4%)
Query: 16 KNFSP-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG 74
++ +P +++DIA H AY+ L + + +G+ ++ T + T++ +L G
Sbjct: 49 RDLAPIGALEDIARAHPMAYIDQLHRL---SPDEGVARVDAD--TTMSPGTWEAALRGVG 103
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
VD V K F+ RPPGHHA MGFC F N A+AARYAQ +G+
Sbjct: 104 GACRAVDEVLTKKVNN----AFSASRPPGHHAEKDRAMGFCFFNNAAVAARYAQEKYGID 159
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
RV IIDFDVHHGNGT D F+DDP + + STHQ YPG+G E G + + +N+PLP
Sbjct: 160 RVAIIDFDVHHGNGTQDIFWDDPSVMYCSTHQMPLYPGSGDASETGEAN---TIVNVPLP 216
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G + F +++P F P+L+++SAG+DAH DPL L + +
Sbjct: 217 PGENGAGFKEAFEVILLPRLDGFAPELVIISAGFDAHARDPLGGLNLVEADFAWATRALM 276
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+A R V LEGGY+L L+ S A
Sbjct: 277 DVADKHSDGRVVSVLEGGYDLEGLARSTA 305
>gi|167562404|ref|ZP_02355320.1| histone deacetylase family, putative [Burkholderia oklahomensis
EO147]
Length = 369
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 149/259 (57%), Gaps = 14/259 (5%)
Query: 19 SPASVD-DIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESLAAAGAG 76
+PA+ D D+ +H Y+ ++A D G + G G +++ + +AG
Sbjct: 66 APAATDADLLRIHPAHYLEAFKRASDAGGGDLGELAPFGKG-------SYEIAALSAGLA 118
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
IA VD+V A + F+L RPPGHH + PMGFC+F N+ IA A+ H ++RV
Sbjct: 119 IAAVDAVLAERAAN----AFSLSRPPGHHCLRDKPMGFCLFANIPIALEAARAKHRIERV 174
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPG 195
+ID+DVHHGNGT +YDDP +S HQD + PG DE G G G G+ +N+PL
Sbjct: 175 AVIDWDVHHGNGTQAIYYDDPHTLTISLHQDRCFPPGYSGADERGAGAGVGANVNVPLLA 234
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
G+GD A R F +++P FKP+LI+V++G DA+ +DPLA +Q + +Y + +K+
Sbjct: 235 GAGDDAYRYTFERIVLPALDAFKPELIVVASGLDANAVDPLARMQLHSDSYRFMTRAVKE 294
Query: 256 LAKDLCGSRCVFFLEGGYN 274
A+ CG R V EGGY+
Sbjct: 295 AAQRHCGGRLVVVHEGGYS 313
>gi|149915330|ref|ZP_01903857.1| histone deacetylase family protein [Roseobacter sp. AzwK-3b]
gi|149810619|gb|EDM70460.1| histone deacetylase family protein [Roseobacter sp. AzwK-3b]
Length = 307
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 142/256 (55%), Gaps = 12/256 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +D+ H ++++ + A+ +GI+ ++ T+ + + +L G +A V
Sbjct: 47 ASEEDLRLCHPQSHIDRVRAAV---PDEGIVQLDAD--TWMSPGSLDAALRGVGGALAAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + F RPPGHHA + MGFC+FG VAIAAR+A HGL RV ++D
Sbjct: 102 DAVLGGQAGN----AFVATRPPGHHAETERTMGFCLFGTVAIAARHAMERHGLSRVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D + + F+S+HQ +PGTG DE G G+ LNLPL S
Sbjct: 158 FDVHHGNGTQDLLWSEARSLFVSSHQSPLWPGTGTPDETG---AHGNVLNLPLAPRSDGA 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R + + + P + F P+LIL+SAG+DAH DPLA L T + + + LA+
Sbjct: 215 VFRAAYEDRVFPAIEAFAPELILISAGFDAHHADPLAELNLTEADFEWVTGRLCDLAQAH 274
Query: 261 CGSRCVFFLEGGYNLN 276
CG R V LEGGY+L
Sbjct: 275 CGGRVVSCLEGGYDLQ 290
>gi|167569588|ref|ZP_02362462.1| histone deacetylase family, putative [Burkholderia oklahomensis
C6786]
Length = 369
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/259 (38%), Positives = 149/259 (57%), Gaps = 14/259 (5%)
Query: 19 SPASVD-DIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESLAAAGAG 76
+PA+ D D+ +H Y+ ++A D G + G G +++ + +AG
Sbjct: 66 APAATDADLLRIHPAHYLEAFKRASDAGGGDLGELAPFGKG-------SYEIAALSAGLA 118
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
IA VD+V A + F+L RPPGHH + PMGFC+F N+ IA A+ H ++RV
Sbjct: 119 IAAVDAVLAERAAN----AFSLSRPPGHHCLRDKPMGFCLFANIPIALEAARAKHRIERV 174
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPG 195
+ID+DVHHGNGT +YDDP +S HQD + PG DE G G G G+ +N+PL
Sbjct: 175 AVIDWDVHHGNGTQAIYYDDPHTLTISLHQDRCFPPGYSGADERGAGAGVGANVNVPLLA 234
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
G+GD A R F +++P FKP+LI+V++G DA+ +DPLA +Q + +Y + +K+
Sbjct: 235 GAGDDAYRYTFERIVLPALDAFKPELIVVASGLDANAVDPLARMQLHSDSYRFMTHAVKE 294
Query: 256 LAKDLCGSRCVFFLEGGYN 274
A+ CG R V EGGY+
Sbjct: 295 AAQRHCGGRLVVVHEGGYS 313
>gi|77464718|ref|YP_354222.1| histone deacetylase [Rhodobacter sphaeroides 2.4.1]
gi|77389136|gb|ABA80321.1| Histone deacetylase family protein [Rhodobacter sphaeroides 2.4.1]
Length = 307
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 142/262 (54%), Gaps = 13/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A D+ H +AY+ + A +G+ T+ + +F+ ++ A
Sbjct: 39 LERREAPLAEEADVLRCHPQAYLDRIRAAEPAEGIRGL-----DPDTWMSPGSFEAAMRA 93
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G A VD V A + F RPPGHHA + PMGFC+FG+ AIAA+ A HG
Sbjct: 94 VGGTCAAVDLVLAGEASS----AFVGCRPPGHHAERERPMGFCLFGSAAIAAKRALDHHG 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV ++DFDVHHGNGT D +D+ F+S+HQ YPGTG DE G G LNLP
Sbjct: 150 LDRVAVVDFDVHHGNGTQDLLWDESRALFVSSHQMPLYPGTGAADERG---AHGQILNLP 206
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L GSG MR + E + ++P+LIL+SAG+DAH DPLA+L + + L
Sbjct: 207 LAPGSGSAEMRAAWEEAFRRI-EAWQPELILISAGFDAHAADPLANLNWREADFAWLTGR 265
Query: 253 IKQLAKDLCGSRCVFFLEGGYN 274
+ LA CG R V LEGGY+
Sbjct: 266 LCDLAAASCGGRVVSTLEGGYD 287
>gi|161524514|ref|YP_001579526.1| histone deacetylase superfamily protein [Burkholderia multivorans
ATCC 17616]
gi|189350730|ref|YP_001946358.1| acetoin utilization protein [Burkholderia multivorans ATCC 17616]
gi|160341943|gb|ABX15029.1| histone deacetylase superfamily [Burkholderia multivorans ATCC
17616]
gi|189334752|dbj|BAG43822.1| acetoin utilization protein [Burkholderia multivorans ATCC 17616]
Length = 373
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 147/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ DD+ +H Y+ D G + G G +A
Sbjct: 61 LDMRGAAPAARDDLLRIHPAGYLDAFRALSDANGGDLGDLAPFGKG---------SYEIA 111
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A AG+A+ A R F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 112 ALSAGLAIAAVDAVVAERAAN--AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDPD +S HQD + PG G ++ G G G G+ LN
Sbjct: 170 GIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYGGAEDRGAGAGVGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI+V++G DA +DPLA +Q T +Y +
Sbjct: 230 VPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVDPLARMQLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|406888454|gb|EKD34928.1| hypothetical protein ACD_75C02122G0002, partial [uncultured
bacterium]
Length = 239
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 130/219 (59%), Gaps = 5/219 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA+IRPPGHHA P MGFC+ NVA+ A+Y +R + L R+ I+DFD HHGNGT + FY
Sbjct: 13 GFAMIRPPGHHAEPGRGMGFCIINNVAVTAQYLRRKYHLNRILILDFDAHHGNGTQEVFY 72
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
D ++ +S HQ +P TGK E G G GEG T+N+P+ GD + ++
Sbjct: 73 DTDEVLVISIHQRDLFPFTGKASEAGSGPGEGYTINVPVFAQFGDLEYTFLLGRILQSVM 132
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+++ P +ILVSAGYD H + ++ TT Y ++ A +KQ A+++CG R + LEGGYN
Sbjct: 133 EQYLPQIILVSAGYDGHRDETISGTLLTTEWYGLITAMLKQYAREVCGDRLLMILEGGYN 192
Query: 275 LNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKV 313
SL SV + + L A+ D + + E + +V
Sbjct: 193 PVSLEASVLATLDSLL-----AARRDKIGVFFSERANQV 226
>gi|254454403|ref|ZP_05067840.1| histone deacetylase family protein [Octadecabacter arcticus 238]
gi|198268809|gb|EDY93079.1| histone deacetylase family protein [Octadecabacter arcticus 238]
Length = 307
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/261 (40%), Positives = 144/261 (55%), Gaps = 13/261 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ DD+ H + +V ++ A A +G ++ T+ + T + + AAG + V
Sbjct: 47 AADDDLLRAHPKGHVDTIKAA---APSEGWRSLDAD--THMSIGTLEAAYRAAGGVVKAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A + FA +RPPGHHA + MGFC FG+VA+AA++A HGLKRV I+D
Sbjct: 102 DLVMAGEAGN----AFAAVRPPGHHAERETAMGFCFFGSVAVAAKHALEFHGLKRVAILD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D D I F S+HQ YPGTG E G G+ +N+PLP G G
Sbjct: 158 FDVHHGNGTQDLVEGDARILFCSSHQMPLYPGTGAAHETGVGN----VVNVPLPDGCGSA 213
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R + + P + FKP+L+L+SAG+DAH DPLA + + + + LA
Sbjct: 214 KFRAAWEREVFPRVEAFKPELLLISAGFDAHADDPLAGMMLHEDDFAWITGKLCDLADKH 273
Query: 261 CGSRCVFFLEGGYNLNSLSYS 281
C R V LEGGY+L +L S
Sbjct: 274 CSGRVVSALEGGYDLEALGRS 294
>gi|40062660|gb|AAR37581.1| histone deacetylase family protein [uncultured marine bacterium
313]
Length = 307
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 142/253 (56%), Gaps = 10/253 (3%)
Query: 38 LEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFA 97
L D +QG+ ++G T + + + + A G+ + +D V + D F
Sbjct: 64 LNNVKDSFPKQGLNFLDGD--TIVSPGSKEATRDAVGSILTAIDGVM----KKDLDNAFC 117
Query: 98 LIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDP 157
+RPPGHHA + MGFCV+ N+A+ A Y + LK+V IIDFDVHHGNGT D FYD+
Sbjct: 118 AVRPPGHHAEKQKAMGFCVYNNIAVGAYYLLEKYKLKKVAIIDFDVHHGNGTQDIFYDNE 177
Query: 158 DIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRF 217
+ ++S+HQ YPG+G +E G D + LN+PL G+ + + I + F
Sbjct: 178 KVLYISSHQYPYYPGSGAANEKGSKD---NVLNVPLSAGTQSHEFLNAY-DSIFKKLKTF 233
Query: 218 KPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNS 277
KP+ IL+SAG+DAH DPLA + + YY L I LAK+LC + V LEGGY+LN+
Sbjct: 234 KPEFILLSAGFDAHKDDPLAQINLESKDYYTLTKRILSLAKELCDGKVVSILEGGYDLNA 293
Query: 278 LSYSVADSFRAFL 290
L SV ++ L
Sbjct: 294 LKESVDYHVKSLL 306
>gi|254441411|ref|ZP_05054904.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
gi|198251489|gb|EDY75804.1| Histone deacetylase family, putative [Octadecabacter antarcticus
307]
Length = 366
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 149/266 (56%), Gaps = 17/266 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE---S 69
++L++ S AS D+ VH +Y+ + A D G T F
Sbjct: 60 LDLRSASEASRIDLLRVHPASYLDTFKAASDTG-----------GGELGRRTPFGPGGYE 108
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+AA AG+++ A K D +AL RPPGHH +P P GFC+F N+A+A + A+
Sbjct: 109 MAALSAGLSIAALQAVLKG--DVTNAYALSRPPGHHCLPDYPNGFCLFANLALAIQSARA 166
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGST 188
+RV ++D+DVHHGNGT FY+DPD+ +S HQD +YP TG + GRG G G
Sbjct: 167 NDLTQRVVVLDWDVHHGNGTEAIFYEDPDVLTISMHQDRNYPMDTGDFTDRGRGKGAGFN 226
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+PLP G+G + ++++P Q FKPD+I+++ GYDA +DPL + T T+ +
Sbjct: 227 LNIPLPPGTGHIGYLSTMEQIVIPQIQAFKPDVIVIACGYDAAAIDPLGRMLATAETFQI 286
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYN 274
+ +K LA+DLC R + EGGY+
Sbjct: 287 MTQQVKSLAQDLCNGRLMMAHEGGYS 312
>gi|429207278|ref|ZP_19198537.1| Acetylspermidine deacetylase [Rhodobacter sp. AKP1]
gi|428189653|gb|EKX58206.1| Acetylspermidine deacetylase [Rhodobacter sp. AKP1]
Length = 307
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 142/262 (54%), Gaps = 13/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A D+ H +AY+ + A +G+ T+ + +F+ ++ A
Sbjct: 39 LERREAPLADEADVLRCHPQAYLDRIRAAEPAEGLRGL-----DPDTWMSPGSFEAAMRA 93
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G A VD V A + F RPPGHHA + PMGFC+FG+ AIAA+ A HG
Sbjct: 94 VGGTCAAVDLVLAGEASS----AFVGCRPPGHHAERERPMGFCLFGSAAIAAKRALDHHG 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV ++DFDVHHGNGT D +D+ F+S+HQ YPGTG DE G G LNLP
Sbjct: 150 LGRVAVVDFDVHHGNGTQDLLWDESRALFVSSHQMPLYPGTGAADERG---AHGQILNLP 206
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L GSG MR + E + ++P+LIL+SAG+DAH DPLA+L + + L
Sbjct: 207 LAPGSGSAEMRAAWEEAFRRI-EAWQPELILISAGFDAHAADPLANLNWREADFAWLTGR 265
Query: 253 IKQLAKDLCGSRCVFFLEGGYN 274
+ LA CG R V LEGGY+
Sbjct: 266 LCDLAAASCGGRVVSTLEGGYD 287
>gi|209886010|ref|YP_002289867.1| histone deacetylase superfamily protein [Oligotropha
carboxidovorans OM5]
gi|337740419|ref|YP_004632147.1| histone deacetylase family protein [Oligotropha carboxidovorans
OM5]
gi|386029436|ref|YP_005950211.1| histone deacetylase family protein [Oligotropha carboxidovorans
OM4]
gi|209874206|gb|ACI94002.1| histone deacetylase superfamily [Oligotropha carboxidovorans OM5]
gi|336094504|gb|AEI02330.1| histone deacetylase family protein [Oligotropha carboxidovorans
OM4]
gi|336098083|gb|AEI05906.1| histone deacetylase family protein [Oligotropha carboxidovorans
OM5]
Length = 310
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 149/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
++ + H +YV + +AM + +QG++ ++G T + T++ + G A VD+
Sbjct: 53 LETVKLCHDESYVEEI-RAM--SPKQGLVYLDGD--TMMSPGTWEAVMRGVGGANAGVDA 107
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V + K + F RP GHHA MGFC F AIAARYAQ+ HG+ RV ++DFD
Sbjct: 108 VVSGKAQN----VFVGTRPCGHHAERNRAMGFCFFDQAAIAARYAQKKHGVGRVAVVDFD 163
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNG+ D F+ DP + + STHQ +PGTG E G D + +N P+ G
Sbjct: 164 VHHGNGSQDIFWADPTVMYCSTHQMPLFPGTGAAQERGEHD---TIVNAPMRPGDDGVKF 220
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R F VI+P Q+F P+LI++SAG+DAH DPLA++Q + + + +A G
Sbjct: 221 REAFEGVILPQLQKFSPELIIISAGFDAHWRDPLANIQLDEKDFGWVTRKLMDVADKSAG 280
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L L S+ + A +G
Sbjct: 281 GRIVSVLEGGYDLQGLHDSIVEHVSALMG 309
>gi|159045837|ref|YP_001534631.1| histone deacetylase family protein [Dinoroseobacter shibae DFL 12]
gi|157913597|gb|ABV95030.1| histone deacetylase family protein [Dinoroseobacter shibae DFL 12]
Length = 313
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 149/282 (52%), Gaps = 10/282 (3%)
Query: 9 GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
G +E ++ + DI H + YV + A+ ++G ++ T+ + ++
Sbjct: 38 GFAALERRSAPLGEIADILRCHPQGYVDRVRAAI---PEEGAGVVSLDADTHVMSGSWNA 94
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L G A VD+V A + F RPPGHHA + MGFC+FGN+AI A+ A
Sbjct: 95 ALRGVGGVCAAVDAVLAGEVGN----AFVACRPPGHHAETETAMGFCLFGNIAIGAKRAL 150
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
HGL RV ++DFDVHHGNGT D +D+ FF+S+HQ YPG+G E G G+
Sbjct: 151 DHHGLSRVAVVDFDVHHGNGTQDLLWDEARAFFISSHQMPLYPGSGARHETG---AHGNV 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
NLP P + A R + + P + F+P+LILVSAG+DAH DPLA + +
Sbjct: 208 FNLPFPPDTAGPAFRRQYEAEVFPALENFRPELILVSAGFDAHRADPLAQMALVEEDFAW 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ + ++A + C R V LEGGY+L +L S A + +
Sbjct: 268 VTGRLCEIAAEFCDGRVVSTLEGGYDLPALGASTAAHVKTLM 309
>gi|337270077|ref|YP_004614132.1| histone deacetylase superfamily protein [Mesorhizobium
opportunistum WSM2075]
gi|336030387|gb|AEH90038.1| histone deacetylase superfamily [Mesorhizobium opportunistum
WSM2075]
Length = 308
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 138/236 (58%), Gaps = 10/236 (4%)
Query: 48 QGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAI 107
QGI I+ T A+ ++Q ++AA GA A VD V + R D F RPPGHHA
Sbjct: 74 QGIARIDAD--TTASPKSWQAAIAAIGAANAAVDDV--FEGRADNV--FVAARPPGHHAE 127
Query: 108 PKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD 167
MGFC+F AIAARYAQ+ HG++RV ++D+DVHHGNGT D F+DDP + + STHQ
Sbjct: 128 KTTAMGFCLFNTAAIAARYAQKKHGVERVAVVDWDVHHGNGTQDIFWDDPSVLYCSTHQM 187
Query: 168 GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAG 227
YPGTG DE G G+ +N PL +G R F ++P F PDLI++SAG
Sbjct: 188 PLYPGTGAKDET----GAGNIVNAPLAPQTGSEVFRDAFLSRVLPALDNFAPDLIIISAG 243
Query: 228 YDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+DAH DPLA + T + + Q A +R V LEGGY+L L++SVA
Sbjct: 244 FDAHHRDPLAEINLTEDDFDWATGQLMQRAARHSRNRLVSLLEGGYDLQGLAFSVA 299
>gi|424909634|ref|ZP_18333011.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. viciae USDA 2370]
gi|392845665|gb|EJA98187.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. viciae USDA 2370]
Length = 311
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA +A VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYVSQKSLQAALTGIGAAMAAVDDVFAGAADNV------FVAARPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F NVAIAAR+AQ+AHG +RV IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNVAIAARHAQKAHGAERVAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLIL+SAG+DAH DPL
Sbjct: 199 NETGV---KNNVVNAPLSPNTGSEHFREAFKSRVLPAIADFSPDLILISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYTSNRVVSLLEGGYDLEGLAESAA 302
>gi|344940653|ref|ZP_08779941.1| histone deacetylase superfamily [Methylobacter tundripaludum SV96]
gi|344261845|gb|EGW22116.1| histone deacetylase superfamily [Methylobacter tundripaludum SV96]
Length = 310
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/226 (41%), Positives = 132/226 (58%), Gaps = 8/226 (3%)
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
Q + A GA VD V K F +RPPGHHA P+ MGFC+F N+AIAA Y
Sbjct: 91 QAAFRAVGAVCDAVDKVLTGKADN----AFCAVRPPGHHAEPQLAMGFCLFNNIAIAANY 146
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
A++ + L+R+ I+DFDVHHGNGT AFY+ P++ + S+H+ YPGTG E G G+
Sbjct: 147 ARQQYQLERIAIVDFDVHHGNGTQAAFYNQPNVLYASSHEMPHYPGTGHPAETGVGN--- 203
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+N+PL G R + +I+P + FKP+L+LVSAG+DAH DPLAS+ +
Sbjct: 204 -IINVPLAAGDSGIEFRQKYAHIILPALKIFKPELLLVSAGFDAHKDDPLASIMLVEDDF 262
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + +A C R + LEGGYNL +L+ SVA + + +
Sbjct: 263 KWVTQELMSVADHCCKGRVISALEGGYNLKALAASVAIHIKTLMTD 308
>gi|402851558|ref|ZP_10899710.1| Acetylspermidine deacetylase [Rhodovulum sp. PH10]
gi|402498182|gb|EJW09942.1| Acetylspermidine deacetylase [Rhodovulum sp. PH10]
Length = 309
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 146/270 (54%), Gaps = 12/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A++ IA H Y+ + A R +G+I ++ T + T++ +L + G + V
Sbjct: 50 AALSRIALCHPMHYIEAIRDASPR---EGLIQLDTD--TSMSPGTYEAALRSVGGAVLAV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V F +RPPGHHA PMGFC F N AIAAR+A+ HG +RV +ID
Sbjct: 105 DEVMTGTVSN----AFCAMRPPGHHAETALPMGFCFFNNAAIAARHARDKHGAERVAVID 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D + DP+I + STH+ YPGTG E G G+ +N PL G G
Sbjct: 161 FDVHHGNGTQDILWADPNIMYCSTHEMPLYPGTGAPSERGE---HGTIVNAPLRAGDGGD 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ F +I+P F+PDL+++S+G+DAH+ DPL+++ Y + ++ +A
Sbjct: 218 EFQEAFENIILPRLMDFRPDLLVLSSGFDAHMRDPLSNINLLEPDYTWVTKSLMDVADKC 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
R V LEGGY+L L+ SV A +
Sbjct: 278 ANGRLVSLLEGGYDLQGLARSVGVHVLALM 307
>gi|407719747|ref|YP_006839409.1| hypothetical protein BN406_00538 [Sinorhizobium meliloti Rm41]
gi|407317979|emb|CCM66583.1| putative protein slr0245 [Sinorhizobium meliloti Rm41]
Length = 309
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/223 (44%), Positives = 125/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ +SL AA GI + + + F RPPGHHA MGFC F
Sbjct: 83 TYASP----QSLEAALTGIGGAVAAVDAVFAGEADNAFVAARPPGHHAEKNRAMGFCFFN 138
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVAIAARYAQ AHG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 139 NVAIAARYAQTAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQIPLYPGTGAKDE 198
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + +N PL SG R F ++P + F+PD +L+SAG+DAH DPLA
Sbjct: 199 TGV---RNNVVNAPLSPNSGSEHFRDAFRSRVLPALENFRPDFLLISAGFDAHHRDPLAQ 255
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + +A G+R V LEGGY+L L+ S
Sbjct: 256 INLVGEDFDWATGRLLDVAGRSAGNRIVSLLEGGYDLQGLAES 298
>gi|406896137|gb|EKD40515.1| hypothetical protein ACD_75C00026G0007 [uncultured bacterium]
Length = 317
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 145/265 (54%), Gaps = 13/265 (4%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA-TTFQESLAAAGAGIALVDSVA 84
I +VHA Y++ D A G L E P A T+ + A G + +D+V
Sbjct: 57 IEAVHAIRYIT----KFDEACLYG--LNEFEHPDNAICRETYDVAFYAVGGVLKAIDAVM 110
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
K D F +RPPGHHA PMGFC F NVAI ARY Q+ HG+ RV IIDFDVH
Sbjct: 111 --KGEVDN--AFCAVRPPGHHAERDKPMGFCYFNNVAIGARYLQKEHGITRVGIIDFDVH 166
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
HGNGT F DP + + S H+ S YPGTG+ E+G G+GEG T+N P+ G GD
Sbjct: 167 HGNGTQHIFDRDPTVLYYSIHEHPSFAYPGTGRDFELGIGEGEGYTVNSPVLPGRGDEEY 226
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
R + + +VP ++FKP+ I++SAG+DAH D ++ TT Y ++ I L
Sbjct: 227 RRLIMQDLVPAFKKFKPEFIMLSAGFDAHESDMMSGTNLTTDGYDFISEVIVNLVNRFAD 286
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFR 287
R V LEGGYNL+ L V + +
Sbjct: 287 GRVVSVLEGGYNLDVLPLLVENHIK 311
>gi|392378575|ref|YP_004985735.1| putative deacetylase [Azospirillum brasilense Sp245]
gi|356880057|emb|CCD01004.1| putative deacetylase [Azospirillum brasilense Sp245]
Length = 309
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 119/195 (61%), Gaps = 3/195 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA + MGFC+F N A+ A +A+ HGL+RV ++DFDVHHGNGT D F
Sbjct: 116 FCAVRPPGHHAEHEKAMGFCLFNNAAVGAYHARAVHGLQRVAVMDFDVHHGNGTQDIFQR 175
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DPD+ + STHQ YPGTG E +GD G+ +N PL SG R +I+P
Sbjct: 176 DPDLLYCSTHQSPLYPGTGDAGE--KGD-YGNCVNAPLAAMSGSPEFRHAMTHIILPAID 232
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
FKPDL+++SAG+DAH DPLA L T + + LA+ CG+R V LEGGYNL
Sbjct: 233 HFKPDLLIISAGFDAHSRDPLAGLHLTDDDFAWATRKLGDLARTHCGARIVSVLEGGYNL 292
Query: 276 NSLSYSVADSFRAFL 290
+L+ + A R +
Sbjct: 293 RALASATAAHVRELM 307
>gi|408788443|ref|ZP_11200162.1| deacetylase [Rhizobium lupini HPC(L)]
gi|408485685|gb|EKJ94020.1| deacetylase [Rhizobium lupini HPC(L)]
Length = 311
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA +A VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYVSQKSLQAALTGIGAAMAAVDDVFTGAADNV------FVAARPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F NVAIAAR+AQ+AHG +RV IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNVAIAARHAQKAHGAERVAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLIL+SAG+DAH DPL
Sbjct: 199 NETGV---KNNVVNAPLSPNTGSEHFREAFKSRVLPAIADFSPDLILISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYTSNRVVSLLEGGYDLEGLAESAA 302
>gi|424880296|ref|ZP_18303928.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WU95]
gi|392516659|gb|EIW41391.1| deacetylase, histone deacetylase/acetoin utilization protein
[Rhizobium leguminosarum bv. trifolii WU95]
Length = 311
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/223 (43%), Positives = 126/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA++ + Q +L G +A VD V R D F RPPGHHA MGFC F
Sbjct: 85 TYASSKSLQAALTGIGGAMAAVDDVFTG--RADNV--FVAARPPGHHAEKMTAMGFCFFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAAR+AQ+ HG +R+ I+D+DVHHGNGT D F+DD + F STHQ YPGTG DE
Sbjct: 141 NAAIAARHAQKTHGAERIAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + +N PL G R F ++P F+PDLI++SAG+DAH DPLA
Sbjct: 201 KGT---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ T + + ++A +R V LEGGY+L L+ S
Sbjct: 258 INLTGEDFDWATGRVLEVADRYAKNRVVSLLEGGYDLEGLAES 300
>gi|162454439|ref|YP_001616806.1| histone deacetylase [Sorangium cellulosum So ce56]
gi|161165021|emb|CAN96326.1| histone deacetylase family protein [Sorangium cellulosum So ce56]
Length = 369
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/283 (40%), Positives = 156/283 (55%), Gaps = 16/283 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++A VHA Y+ +++ R S L TY + + + AGA +ALV
Sbjct: 63 ATDEELARVHAPRYL----ESLGRLSGHYAAL---DPDTYVVPRSVEAARRGAGAAVALV 115
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V A R LG AL+RPPGHHA MGFC+ N A A + GL RV ++D
Sbjct: 116 DAVIAGPGR----LGVALLRPPGHHATRDAGMGFCLL-NNVAVAARAALSSGLSRVAVVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F+DDP + F S HQ YPGTG DE+G GDG G T+N+PL G+ D
Sbjct: 171 FDVHHGNGTQDIFWDDPRVLFCSLHQWPFYPGTGAADELGGGDGAGYTVNVPLSDGATDA 230
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
F E+++P + P+LILVSAG+DAH DP+A+++ + Y + + +A
Sbjct: 231 VYEAAFDELLLPVLDEYAPELILVSAGFDAHERDPMAAMKLSRAAYAAMGRRLAAMATAK 290
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA 303
R FLEGGY+L +L S A L S D+PA
Sbjct: 291 ARGRLAIFLEGGYDLTALE----SSLTAALLAASGCEAADDPA 329
>gi|389876821|ref|YP_006370386.1| histone deacetylase-like amidohydrolase [Tistrella mobilis
KA081020-065]
gi|388527605|gb|AFK52802.1| histone deacetylase-like amidohydrolase [Tistrella mobilis
KA081020-065]
Length = 312
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/198 (43%), Positives = 121/198 (61%), Gaps = 3/198 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F IRPPGHHA P PMGFC+F NVA+ A +A+ H + R+ ++DFDVHHGNGT F +
Sbjct: 118 FCAIRPPGHHAEPARPMGFCLFNNVAVGALHARTVHKVNRIAVVDFDVHHGNGTQAIFEN 177
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DPD+F+ S HQ YPGTG+I E G G+ +N+P GSG +R F E ++P
Sbjct: 178 DPDLFYGSIHQAPFYPGTGRISERGVA---GNIMNIPFGAGSGGIMVRRAFIERLIPALD 234
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F PDL+LVSAG+DAH DP+ + T + + + ++A+ CG R + LEGGY+L
Sbjct: 235 EFMPDLLLVSAGFDAHHRDPVGGMDLGTEDFAWMTKELIEVARRHCGGRIISTLEGGYDL 294
Query: 276 NSLSYSVADSFRAFLGEP 293
+L+ + A + P
Sbjct: 295 RALADATASHVHVLMTAP 312
>gi|451948192|ref|YP_007468787.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
gi|451907540|gb|AGF79134.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
Length = 319
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/272 (36%), Positives = 150/272 (55%), Gaps = 11/272 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D+ VH+ ++ E+++ A Q I + ++ + AAGAGI+ +
Sbjct: 56 ATRSDLTRVHSENWLFRFEESV-LAGQTYIDHFDNQ----VCYDSYDIACLAAGAGISAI 110
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D + K F L+RPPGHHA P GFC F N +AARY Q + +RV I D
Sbjct: 111 DLIEEGKGDNI----FCLVRPPGHHAERSVPFGFCFFNNCVVAARYWQHKYHKRRVLIFD 166
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
FD HHGNG AF ++ D +++S H+ SYPGTG DE G GDG+G+ LNLPL G+
Sbjct: 167 FDAHHGNGIQSAFEEESDSYYISIHEHPSFSYPGTGYGDEHGMGDGKGTILNLPLSPGAN 226
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D + + +VI+P + ++P+ I+++AG+DAH+ D ++ L ++T Y+ L +K A
Sbjct: 227 DGDVENLLKKVILPKLEEWQPEAIIIAAGFDAHIADDMSGLHYSTDLYFTLGRQVKSWAN 286
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ + LEGGY L+ L SV R L
Sbjct: 287 RFTNGKLLSILEGGYELSVLGDSVEAYVRGIL 318
>gi|221640632|ref|YP_002526894.1| Histone deacetylase superfamily [Rhodobacter sphaeroides KD131]
gi|221161413|gb|ACM02393.1| Histone deacetylase superfamily [Rhodobacter sphaeroides KD131]
Length = 307
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 142/262 (54%), Gaps = 13/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A D+ H +AY+ + A +G+ T+ + +F+ ++ A
Sbjct: 39 LERREAPLADEADVLRCHPQAYLDRIRAAEPAEGIRGL-----DPDTWMSPGSFEAAMRA 93
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G A VD V A + F RPPGHHA + PMGFC+FG+ AIAA+ A HG
Sbjct: 94 VGGTCAAVDLVLAGEASS----AFVGCRPPGHHAERERPMGFCLFGSAAIAAKRALDHHG 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV ++DFDVHHGNGT D +D+ F+S+HQ YPGTG DE G G LNLP
Sbjct: 150 LGRVAVVDFDVHHGNGTQDLLWDESRALFVSSHQMPLYPGTGAADERG---AHGQILNLP 206
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L GSG MR + E + ++P+LIL+SAG+DAH DPLA+L + + L
Sbjct: 207 LAPGSGSAEMRAAWEEAFRRI-EDWQPELILISAGFDAHAADPLANLNWREADFAWLTGR 265
Query: 253 IKQLAKDLCGSRCVFFLEGGYN 274
+ LA CG R V LEGGY+
Sbjct: 266 LCDLAAASCGGRVVSTLEGGYD 287
>gi|190890631|ref|YP_001977173.1| deacetylase [Rhizobium etli CIAT 652]
gi|190695910|gb|ACE89995.1| probable deacetylase protein [Rhizobium etli CIAT 652]
Length = 311
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 127/225 (56%), Gaps = 11/225 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TYA+ + Q +L G +A VD V A+ N F RPPGHHA MGFC
Sbjct: 85 TYASVKSLQAALTGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKSTAMGFCF 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F N AIAAR+AQ+ HG +RV I+D+DVHHGNGT D F+DD + F STHQ YPG+G
Sbjct: 139 FNNAAIAARHAQKRHGAERVAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGSGAK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G+ + +N PL G R F ++P F+PDLI++SAG+DAH DPL
Sbjct: 199 EEKGK---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A + T + + +LA +R V LEGGY+L L+ S
Sbjct: 256 AQINLTGEDFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|332559611|ref|ZP_08413933.1| histone deacetylase family protein [Rhodobacter sphaeroides WS8N]
gi|332277323|gb|EGJ22638.1| histone deacetylase family protein [Rhodobacter sphaeroides WS8N]
Length = 307
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 141/262 (53%), Gaps = 13/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A D+ H +AY+ + A G+ T+ + +F+ ++ A
Sbjct: 39 LERREAPLAEEADVLRCHPQAYLDRIRAAEPAEGMCGL-----DPDTWMSPGSFEAAMRA 93
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G A VD V A + F RPPGHHA + PMGFC+FG+ AIAA+ A HG
Sbjct: 94 VGGTCAAVDLVLAGEASS----AFVGCRPPGHHAERERPMGFCLFGSAAIAAKRALDHHG 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV ++DFDVHHGNGT D +D+ F+S+HQ YPGTG DE G G LNLP
Sbjct: 150 LGRVAVVDFDVHHGNGTQDLLWDESRALFVSSHQMPLYPGTGAADERG---AHGQILNLP 206
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L GSG MR + E + ++P+LIL+SAG+DAH DPLA+L + + L
Sbjct: 207 LAPGSGSAEMRAAWEEAFRRI-EAWQPELILISAGFDAHAADPLANLNWREADFAWLTGR 265
Query: 253 IKQLAKDLCGSRCVFFLEGGYN 274
+ LA CG R V LEGGY+
Sbjct: 266 LCDLAAASCGGRVVSTLEGGYD 287
>gi|218461547|ref|ZP_03501638.1| probable deacetylase protein [Rhizobium etli Kim 5]
Length = 311
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 127/225 (56%), Gaps = 11/225 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TYA+ + Q +L G +A VD V A+ N F RPPGHHA MGFC
Sbjct: 85 TYASVKSLQAALTGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKTTAMGFCF 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F N AIAAR+AQ+ HG +RV I+D+DVHHGNGT D F+DD + F STHQ YPG+G
Sbjct: 139 FNNAAIAARHAQKRHGAERVAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGSGAK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G+ + +N PL G R F ++P F+PDLI++SAG+DAH DPL
Sbjct: 199 EEKGK---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A + T + + +LA +R V LEGGY+L L+ S
Sbjct: 256 AQINLTGEDFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|397772493|ref|YP_006540039.1| histone deacetylase superfamily [Natrinema sp. J7-2]
gi|397681586|gb|AFO55963.1| histone deacetylase superfamily [Natrinema sp. J7-2]
Length = 343
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 169/318 (53%), Gaps = 23/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ AA
Sbjct: 38 VEYVEAEPCDLDRMATVHERDYLESVRE----------FCADGGGSWDPDTTAVEETWAA 87
Query: 73 --AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
AG+A + AA + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 IRRSAGLACWAAEAALEGATGRDTPFSIGRPPGHHAVSDNAMGFCFVDNVAVAAQHALDH 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + RV IID+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G G GEG+T
Sbjct: 148 DAYDVDRVAIIDWDVHHGNGTQDIFYDRDDVFFVSLHEQGLYPGTGDIDETGTGAGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDRDYLAALEGPITAALTDFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L+ ++ LA + F LEGGY L+ L+ SVA F G P +E
Sbjct: 268 LSDRVRSLAA-DTDAALAFVLEGGYGLDVLADSVALVHETFDGR--------EPIEPDDE 318
Query: 309 PSAKVKQAIERVKHIHSL 326
P K K A+E V H L
Sbjct: 319 PGDKAKAALEDVIDAHGL 336
>gi|227821078|ref|YP_002825048.1| histone deacetylase superfamily protein [Sinorhizobium fredii
NGR234]
gi|227340077|gb|ACP24295.1| histone deacetylase superfamily [Sinorhizobium fredii NGR234]
Length = 309
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 146/279 (52%), Gaps = 20/279 (7%)
Query: 13 IELKNFSP--------ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT 64
+E NF+P S D + H ++ + +A+ + I IE TYA+ +
Sbjct: 34 LEHPNFAPLKRIEASKGSEDLVLLAHTEEHLRSIARAI---PEDDINQIEAD--TYASPS 88
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
+F+ +L GI + + + F RPPGHHA MGFC F +AIAA
Sbjct: 89 SFEAALT----GIGGAVAAVDAVFAGEADNAFVAARPPGHHAEKNRAMGFCFFNTIAIAA 144
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
R+AQ+AHG++RV I+D+DVHHGNGT D F++DP + F STHQ YPGTG +E G
Sbjct: 145 RHAQKAHGVERVAIVDWDVHHGNGTQDIFWNDPSVLFCSTHQMPLYPGTGAKEETG---A 201
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+ +N PL SG R F ++ F+PD +L+SAG+DAH DPLA +
Sbjct: 202 RNNIVNAPLSPNSGSEHFREAFRSRVLAALDNFRPDFVLISAGFDAHYRDPLAQINLVAE 261
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ + + A G+R V LEGGY+L L+ S A
Sbjct: 262 DFDWATGRLMEAAGKSAGNRVVSMLEGGYDLQGLAESAA 300
>gi|417101941|ref|ZP_11960552.1| putative deacetylase protein [Rhizobium etli CNPAF512]
gi|327191813|gb|EGE58812.1| putative deacetylase protein [Rhizobium etli CNPAF512]
Length = 311
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 127/225 (56%), Gaps = 11/225 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TYA+ + Q +L G +A VD V A+ N F RPPGHHA MGFC
Sbjct: 85 TYASVKSLQAALTGIGGAMAAVDDVFSGAADNV------FVAARPPGHHAEKSTAMGFCF 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F N AIAAR+AQ+ HG +RV I+D+DVHHGNGT D F+DD + F STHQ YPG+G
Sbjct: 139 FNNAAIAARHAQKRHGAERVAIVDWDVHHGNGTQDIFWDDASVLFCSTHQMPLYPGSGAK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G+ + +N PL G R F ++P F+PDLI++SAG+DAH DPL
Sbjct: 199 EEKGK---HNTIVNAPLSPNVGSDHFREAFKSRVLPALDDFRPDLIIISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A + T + + +LA +R V LEGGY+L L+ S
Sbjct: 256 AQINLTGEDFDWATGRVLELADRHAKNRVVSLLEGGYDLEGLAES 300
>gi|91762404|ref|ZP_01264369.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1002]
gi|91718206|gb|EAS84856.1| histone deacetylase family protein [Candidatus Pelagibacter ubique
HTCC1002]
Length = 309
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 144/262 (54%), Gaps = 13/262 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
H Y++ +EK+ ++G+ ++G T + + + A G+ I +D V
Sbjct: 58 THNSDYINFVEKSF---PEKGLSFLDGD--TIVSPGSKDATSDAVGSIITAIDGVQ---- 108
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
D F +RPPGHHA MGFC++ NVA+ A Y + LK++ IIDFDVHHGNG
Sbjct: 109 NKDFKNAFCAVRPPGHHAEKNKAMGFCIYNNVAVGANYLINKYKLKKIAIIDFDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T D FYD+ + ++STHQ YPG+G DE G+ + LN+PLP G+ + E
Sbjct: 169 TQDIFYDNEKVLYISTHQYPYYPGSGTKDEKGK---HNNILNIPLPAGTTSEEYLNAY-E 224
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
++ + FKP+ IL+SAG+DAH DPLA LQ + +Y + +L+K C + V
Sbjct: 225 FVLNKIKEFKPEFILLSAGFDAHKDDPLAQLQLESKDFYSITKRTLELSKQYCDGKVVSI 284
Query: 269 LEGGYNLNSLSYSVADSFRAFL 290
LEGGY+L +L S +A L
Sbjct: 285 LEGGYDLQALQESTEMHVKALL 306
>gi|88602015|ref|YP_502193.1| histone deacetylase superfamily protein [Methanospirillum hungatei
JF-1]
gi|88187477|gb|ABD40474.1| histone deacetylase superfamily [Methanospirillum hungatei JF-1]
Length = 322
Score = 184 bits (468), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 131/230 (56%), Gaps = 13/230 (5%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F L RPPGHH GFC N AI ARY Q HG++++ IID+D HHGNGT FYD
Sbjct: 101 FVLNRPPGHHTYADRGGGFCYLNNAAILARYLQ-MHGMEKIMIIDWDAHHGNGTESIFYD 159
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + + S HQ YPGTG+I + G G GEG T+N+P+P G+G + +F E+I+P +
Sbjct: 160 DPSVLYTSIHQSPLYPGTGEIQDTGVGQGEGYTINIPVPPGTGHNSYMKIFSEIILPAGK 219
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI-KQLAKDLCGSRCVFFLEGGYN 274
+F PD +++SAG D+H DPL+SL +G+YY + I + ++ G LEGGYN
Sbjct: 220 QFHPDAVVISAGQDSHKKDPLSSLCLCSGSYYTMTRQILTSITPNVIG-----VLEGGYN 274
Query: 275 LNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
L SL SV A + E+ EP + Q I+ VK H
Sbjct: 275 LASLPVSVHAIVTAL-----QKKEYTGGIEKVNEPDG-IMQIIKSVKSTH 318
>gi|304315317|ref|YP_003850464.1| histone deacetylase-related protein [Methanothermobacter
marburgensis str. Marburg]
gi|302588776|gb|ADL59151.1| histone deacetylase-related protein [Methanothermobacter
marburgensis str. Marburg]
Length = 331
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 159/296 (53%), Gaps = 21/296 (7%)
Query: 13 IELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
++LK P A V DI VH+ +V LE R G + + TY T +F S+
Sbjct: 36 LQLKFMEPRMAGVHDILMVHSSVHVEYLEVFSGRGG--GWLDYD----TYMTPESF--SV 87
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
A AG A+V + A K+ G+++ RPPGHHA MGFC+F N+AIA +++R
Sbjct: 88 ARLAAGGAMVAAEEALKS----GWGYSVARPPGHHATYDRSMGFCIFNNIAIAIEHSRRN 143
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGST 188
G+ + +IDFDVHHGNGT+ FY DP++ ++S HQD +PGTG I+E+G DG+G
Sbjct: 144 LGISKAAVIDFDVHHGNGTSSIFYTDPEVMYISVHQDPRTLFPGTGFIEEIGESDGKGFN 203
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+P+P GSG+ + EV+ F+ D++ VSAG+DAH LDPLA + +
Sbjct: 204 LNIPMPRGSGNNDYIWILSEVLPQVLSEFRADMLFVSAGFDAHRLDPLADIMVDEEFFSW 263
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
+ I G C LEGGY+L +L S G K +PA+
Sbjct: 264 MGWFIHD-----TGLPCAAVLEGGYDLQALGNSNVSFIEGLEGSSVKVEYERSPAV 314
>gi|407694185|ref|YP_006818973.1| histone deacetylase superfamily [Alcanivorax dieselolei B5]
gi|407251523|gb|AFT68630.1| Histone deacetylase superfamily [Alcanivorax dieselolei B5]
Length = 369
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 143/262 (54%), Gaps = 21/262 (8%)
Query: 20 PASVDDIASVHARAY------VSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
PA +DI VH + VS LE D G G TY + ++ AA
Sbjct: 66 PARDEDILRVHTGEHLENVRRVSALEHGGD----------AGDGVTYLGNGGLEIAMLAA 115
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G I +V S+ D G+AL+ PPGHHA G MGFC+F N ++AA YA+ GL
Sbjct: 116 GGAIQMVKSLVQG----DIDSGYALVNPPGHHAPRDGAMGFCIFNNTSVAAAYARDKLGL 171
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLP 192
RV I+D+DVHHGNGT D +++DP + +S HQ + P +G + E G G G G LN+P
Sbjct: 172 DRVAIVDWDVHHGNGTQDIWWEDPSVLTISLHQHLCFPPESGYVGERGAGKGHGYNLNVP 231
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
+P G G+ A V++P Q F+P LI+V G+DA ++DPLA + T+ + +A
Sbjct: 232 MPPGCGNGAYLYAMETVVLPALQAFRPQLIIVGCGFDASIMDPLARMMVTSEGFRAMARR 291
Query: 253 IKQLAKDLCGSRCVFFLEGGYN 274
I A +LC R +F EGGY+
Sbjct: 292 IIDSADELCEGRILFVQEGGYS 313
>gi|393767597|ref|ZP_10356143.1| histone deacetylase superfamily protein [Methylobacterium sp. GXF4]
gi|392726860|gb|EIZ84179.1| histone deacetylase superfamily protein [Methylobacterium sp. GXF4]
Length = 309
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 155/274 (56%), Gaps = 13/274 (4%)
Query: 19 SPASVDDIASV-HARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
+P + ++A++ H R YV L A+ + G++ I+ T +A + + +L A G
Sbjct: 47 APRAEIEVATLTHPREYVDALVAAV---PEHGMVGIDAD--TILSAGSLEATLRAIGGAN 101
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
+D+V A + R F +RPPGHHA MGFC+F + AIAARYAQ+ HG +RV
Sbjct: 102 HALDAVMAGECRN----AFVAMRPPGHHAERTRSMGFCLFNHAAIAARYAQQKHGAERVA 157
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
++D+DVHHGNG+ D F+DD + + STHQ +PG+G E G D + +N+PL
Sbjct: 158 LVDWDVHHGNGSQDIFWDDASVLYASTHQMPLFPGSGAASERGEKD---TIVNVPLRPND 214
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
R F I+ + F+PD+I++SAG+DAH LDPLA+L+ + + LA
Sbjct: 215 DGEVFREAFEAGILARLETFRPDVIVISAGFDAHRLDPLANLRLEAEDFGWATRKLMDLA 274
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ G R V LEGGY+L L+ SV+ A +G
Sbjct: 275 ERCAGGRIVSVLEGGYSLEGLAKSVSAHVDALMG 308
>gi|297182648|gb|ADI18806.1| deacetylases, including yeast histone deacetylase and acetoin
utilization protein [uncultured SAR11 cluster bacterium
HF4000_37C10]
Length = 307
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 13/265 (4%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
+A H + Y+ ++ D +QG+ ++G T + + + + A G+ + +D V
Sbjct: 55 LALAHDKNYLDNIK---DSFPKQGLNFLDGD--TIVSPGSKEATRDAVGSILTAIDGVM- 108
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ D F +RPPGHHA + MGFCV+ N+A+ A Y + LK+V IIDFDVHH
Sbjct: 109 ---KKDFNNAFCAVRPPGHHAEKQKAMGFCVYNNIAVGAYYLLEKYKLKKVAIIDFDVHH 165
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT + FYD+ + ++S+HQ YPG+G +E G D + LN+PL G+
Sbjct: 166 GNGTQNIFYDNEKVLYISSHQYPYYPGSGAANEKGNKD---NVLNVPLSAGTQSHEFLNA 222
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
+ + I + FKP+ IL+SAG+DAH DPLA + + YY L I LAK+LC +
Sbjct: 223 Y-DSIFKKLKAFKPEFILLSAGFDAHKDDPLAQINLESKDYYTLTKRILTLAKELCDGKV 281
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFL 290
V LEGGY+LN+L SV ++ L
Sbjct: 282 VSILEGGYDLNALKESVDYHVKSLL 306
>gi|418296457|ref|ZP_12908300.1| Acetylspermidine deacetylase [Agrobacterium tumefaciens CCNWGS0286]
gi|355538632|gb|EHH07874.1| Acetylspermidine deacetylase [Agrobacterium tumefaciens CCNWGS0286]
Length = 311
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA +A VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYVSRKSLQAALTGIGAAMAAVDDVFTGAADNV------FVAARPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F NVAIAAR+AQ+AHG +RV IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNVAIAARHAQKAHGAERVAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLIL+SAG+DAH DPL
Sbjct: 199 NETGV---KNNIVNAPLSPNTGSEYFREAFKSRVLPAIADFSPDLILISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAA 302
>gi|448306999|ref|ZP_21496900.1| histone deacetylase [Natronorubrum bangense JCM 10635]
gi|445596546|gb|ELY50631.1| histone deacetylase [Natronorubrum bangense JCM 10635]
Length = 342
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/285 (38%), Positives = 160/285 (56%), Gaps = 19/285 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E N P ++ +A+VH +AY+ +++ +G G T +E+ A
Sbjct: 38 VEYVNADPCDLETMAAVHEQAYLESVKQ----------FCADGGGNWDPDTTAVEETWDA 87
Query: 73 AGAGIAL----VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA- 127
+ L VD+ +N P F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 VRHSVGLACWAVDAALEGQNGRKTP--FSIGRPPGHHAVYDDAMGFCFVNNVAVAAQHAL 145
Query: 128 -QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
H + RV I+D+DVHHGNGT D FY+ D+FF+S H+ G YPGTG IDE G GDG+G
Sbjct: 146 DTDDHDVDRVAIVDWDVHHGNGTQDIFYERDDVFFVSIHEQGLYPGTGAIDETGTGDGDG 205
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+TLN+P+P G+ D + IV F PD +L+SAG+DAH DP++ ++ +T Y
Sbjct: 206 TTLNIPMPAGTDDQDYLSAVEGPIVSALTEFDPDCLLISAGFDAHRHDPISRIRLSTEAY 265
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++ ++ LA D + F LEGGY L+ L+ SVA F G
Sbjct: 266 ALMTDRLRTLADDT-DAALAFILEGGYGLDVLADSVAIVHETFDG 309
>gi|383864231|ref|XP_003707583.1| PREDICTED: histone deacetylase 6-like [Megachile rotundata]
Length = 1169
Score = 184 bits (467), Expect = 4e-44, Method: Composition-based stats.
Identities = 99/279 (35%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A++ ++ VH++ Y+ ++ + ++ Y + T+ + + G+ + +V
Sbjct: 587 ATMKELLLVHSQEYIDKIKSVENLKPKELSKQATSYNSVYLHSETWTSACVSTGSLLQVV 646
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV +++ G A++RPPGHHA GFC+F N++IAARYA H +K+V I+D
Sbjct: 647 DSVLNGESQS----GIAIVRPPGHHAEQDAACGFCIFNNISIAARYAIEFHNIKKVLIVD 702
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F DP + ++S H+ +G+ +P + + + VG G GEG +N+P
Sbjct: 703 WDVHHGNGTQAVFEKDPKVLYISIHRYDNGAFFPNSKRANYTYVGSGPGEGFNINIPWNK 762
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GDT F +V++P A +F P+LILVSAG+DA + DPL T Y L +
Sbjct: 763 KGMGDTEYIAAFQQVVMPIAYQFNPELILVSAGFDACIGDPLGGCYVTPEMYGHLTHWLS 822
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+S+++ + LG+P
Sbjct: 823 SLAN----GRIILSLEGGYNINSVSHAMTICTKTLLGDP 857
Score = 153 bits (386), Expect = 1e-34, Method: Composition-based stats.
Identities = 90/240 (37%), Positives = 129/240 (53%), Gaps = 14/240 (5%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +T++ S A G+ I L++++ + G A+IRPPGHHA+ G+C F N
Sbjct: 199 YIHPSTYKLSQLAVGSTINLIENICKGYIQN----GMAIIRPPGHHAMKSEYCGYCFFNN 254
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TG 174
VAIAA A R + K++ I+D+DVHHG T FY+DP + + S H ++G + P
Sbjct: 255 VAIAAESALRNNLAKKILIVDWDVHHGQATQQMFYNDPRVIYFSIHRFENGEFWPNLRES 314
Query: 175 KIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
VG G GEG N+PL G + +F +V++P A F+PDL+LVSAGYDA +
Sbjct: 315 NFHFVGDGLGEGYNFNIPLNKTGMTNADYLAIFQQVLLPVAYEFQPDLVLVSAGYDAALG 374
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
P + T Y A++ L + LEGGY L SL+ S A + R LG+P
Sbjct: 375 CPEGEMLVTPACY----AHLLSSLLCLASGKVAVVLEGGYCLKSLAESAALTLRTLLGDP 430
>gi|418404563|ref|ZP_12978017.1| histone deacetylase superfamily protein [Sinorhizobium meliloti
CCNWSX0020]
gi|359501482|gb|EHK74090.1| histone deacetylase superfamily protein [Sinorhizobium meliloti
CCNWSX0020]
Length = 309
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 125/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ +SL AA GI + + + F RPPGHHA MGFC F
Sbjct: 83 TYASP----QSLEAALTGIGGAVAAVDAVFAGEADNAFVAARPPGHHAEKNRAMGFCFFN 138
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVAIAARYAQ AHG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 139 NVAIAARYAQTAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQIPLYPGTGAKDE 198
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + +N P+ SG R F ++P + F+PD +L+SAG+DAH DPLA
Sbjct: 199 TGV---RNNVVNAPISPNSGSEHFRDAFRSRVLPALENFRPDFLLISAGFDAHHRDPLAQ 255
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + +A G+R V LEGGY+L L+ S
Sbjct: 256 INLVGEDFDWATGRLLDVAGRSAGNRIVSLLEGGYDLQGLAES 298
>gi|298529624|ref|ZP_07017027.1| Histone deacetylase [Desulfonatronospira thiodismutans ASO3-1]
gi|298511060|gb|EFI34963.1| Histone deacetylase [Desulfonatronospira thiodismutans ASO3-1]
Length = 315
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/288 (36%), Positives = 155/288 (53%), Gaps = 10/288 (3%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 62
L +E + SE++ ++ PA +D+ H YV + ++ A + + G T +
Sbjct: 35 LQNEDQNSELV-WQSPEPAREEDLFGNHEAGYVDLVRDSV-AAGRHSL----GYPDTGIS 88
Query: 63 ATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
++ +L AAG I VD V K F +RPPGHHA P MGFC+F NVA+
Sbjct: 89 NGSWDAALTAAGGLINAVDLVMEGK----AANAFCPVRPPGHHARPGMGMGFCLFNNVAL 144
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRG 182
AAR+A + +GL R+ +ID+DVHHGNGT +AFY + ++FF STHQ+ +P TG+ E G G
Sbjct: 145 AARHAMKKYGLDRILVIDWDVHHGNGTQEAFYQEQEVFFFSTHQEAWFPFTGERHETGSG 204
Query: 183 DGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G+ +N P G+G + F +VP +KP L+LVSAG+DA D L T
Sbjct: 205 KGRGTNMNFPFSAGAGRDEILPAFTGHLVPTMDEYKPQLVLVSAGFDAMQGDLLGRFNLT 264
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ L ++A R V LEGGYNL+ L+ + A + +
Sbjct: 265 EDDFARLTEIAMEIAGKHASGRLVSTLEGGYNLDGLARACAAHVKTLM 312
>gi|291278908|ref|YP_003495743.1| acetoin utilization protein AcuC [Deferribacter desulfuricans SSM1]
gi|290753610|dbj|BAI79987.1| acetoin utilization protein AcuC [Deferribacter desulfuricans SSM1]
Length = 331
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 146/265 (55%), Gaps = 12/265 (4%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I VH+++Y+ + D A + + + +F +L A A + D + +
Sbjct: 55 IEFVHSKSYIQEFK---DTAKSETFFQHKDNS---ICEDSFDVALKAVYAHLFAADYIMS 108
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ +P F +RPPGHHA +GFC F N+AI ARY Q+ HG +++ I DFDVHH
Sbjct: 109 N----EPKKIFVAVRPPGHHADKNKALGFCFFNNIAITARYIQKYHGKEKILIFDFDVHH 164
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
GNGT + FY+D ++++S H+ + +PGTG+ E G+G G+G TLN+PL + D
Sbjct: 165 GNGTQNIFYEDNTVYYVSIHEHPTFLFPGTGRYFETGKGLGKGYTLNIPLKPEADDNEFG 224
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
VF E +VP +F+P+++LVSAG+D H D + L FTT Y L +K L+ C
Sbjct: 225 KVFLEKVVPIFYKFEPEILLVSAGFDGHKEDMIGDLNFTTELYRKLGYALKYLSNKFCEG 284
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRA 288
+ LEGGY L+ SV + A
Sbjct: 285 HLLISLEGGYKPEVLAESVVNFLDA 309
>gi|430002432|emb|CCF18213.1| putative deacetylase [Rhizobium sp.]
Length = 310
Score = 184 bits (467), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 145/273 (53%), Gaps = 15/273 (5%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E ++ K AS D + H ++ + + + + + IE TY + + +L
Sbjct: 40 EKLDRKKAPQASEDAVLLAHPEEHLRAVVREI--PEEDEVHQIEAD--TYVGPRSLEAAL 95
Query: 71 AAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
GA +A VD V A+ N F RPPGHHA MGFC+F AIAAR+AQ
Sbjct: 96 TGVGAAMAAVDDVFTGAADNV------FVAARPPGHHAEKTKAMGFCLFNTAAIAARHAQ 149
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ +G +RV I+D+DVHHGNGT D F+DDP + F STHQ YP TG DE G +G+
Sbjct: 150 KTYGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPWTGAKDETGT---KGNI 206
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N PL S R F ++P + F+PD +++SAG+DAH DPLA + +
Sbjct: 207 VNAPLEKDSASEHFREAFKNRVIPALENFRPDFLIISAGFDAHHRDPLAQINLVGDDFDW 266
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ ++A G+R + LEGGY+L L+ S
Sbjct: 267 ATGRLMEIAGKYAGNRLISLLEGGYDLEGLAES 299
>gi|15964636|ref|NP_384989.1| hypothetical protein SMc00969 [Sinorhizobium meliloti 1021]
gi|334315347|ref|YP_004547966.1| histone deacetylase superfamily protein [Sinorhizobium meliloti
AK83]
gi|384528593|ref|YP_005712681.1| histone deacetylase superfamily protein [Sinorhizobium meliloti
BL225C]
gi|384534995|ref|YP_005719080.1| acetylspermidine deacetylase [Sinorhizobium meliloti SM11]
gi|433612648|ref|YP_007189446.1| Deacetylase [Sinorhizobium meliloti GR4]
gi|15073814|emb|CAC45455.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333810769|gb|AEG03438.1| histone deacetylase superfamily [Sinorhizobium meliloti BL225C]
gi|334094341|gb|AEG52352.1| histone deacetylase superfamily [Sinorhizobium meliloti AK83]
gi|336031887|gb|AEH77819.1| acetylspermidine deacetylase [Sinorhizobium meliloti SM11]
gi|429550838|gb|AGA05847.1| Deacetylase [Sinorhizobium meliloti GR4]
Length = 309
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/223 (43%), Positives = 125/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ +SL AA GI + + + F RPPGHHA MGFC F
Sbjct: 83 TYASP----QSLEAALTGIGGAVAAVDAVFAGEADNAFVAARPPGHHAEKNRAMGFCFFN 138
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVAIAARYAQ AHG +RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 139 NVAIAARYAQTAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQIPLYPGTGAKDE 198
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + +N P+ SG R F ++P + F+PD +L+SAG+DAH DPLA
Sbjct: 199 TGV---RNNVVNAPISPNSGSEHFRDAFRSRVLPALENFRPDFLLISAGFDAHHRDPLAQ 255
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + +A G+R V LEGGY+L L+ S
Sbjct: 256 INLVGEDFDWATGRLLDVAGRSAGNRIVSLLEGGYDLQGLAES 298
>gi|114769859|ref|ZP_01447469.1| histone deacetylase family protein [Rhodobacterales bacterium
HTCC2255]
gi|114549564|gb|EAU52446.1| histone deacetylase family protein [alpha proteobacterium HTCC2255]
Length = 311
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 152/274 (55%), Gaps = 13/274 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
+ D + H + YV ++ + G + ++G T+ + +F ++ A G+ V+
Sbjct: 51 TYDQVTLCHPKEYVDYIKNS---CPLDGSVSLDGD--THVNSASFNAAMRAVGSICEAVN 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
V K + F RPPGHHA PMGFC+FG +AIAA+YA + HGL RV IIDF
Sbjct: 106 LVVNRKLQN----AFCASRPPGHHAEKAKPMGFCLFGTIAIAAKYAMKTHGLSRVAIIDF 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT + +DDP+I F+S+ Q +PGTG+ E G + +N PL
Sbjct: 162 DVHHGNGTQNLVWDDPNILFVSSQQIPLWPGTGERHETG---AFNNIINYPLNPDVDGQD 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
+ + + I+P F+P+++ +SAG+DAHV DPLA+L FTT + +L + + A C
Sbjct: 219 LIEAYEKEILPKIAEFEPEMLFISAGFDAHVNDPLANLNFTTNDFKILTKLLCKFADTYC 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
R V LEGGY+L SL V D+ L E +K
Sbjct: 279 KGRVVSTLEGGYDLPSLRECV-DAHVKVLMEHAK 311
>gi|154245103|ref|YP_001416061.1| histone deacetylase superfamily protein [Xanthobacter autotrophicus
Py2]
gi|154159188|gb|ABS66404.1| histone deacetylase superfamily [Xanthobacter autotrophicus Py2]
Length = 323
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 150/277 (54%), Gaps = 13/277 (4%)
Query: 15 LKNFSP-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
+++ +P + +DI VH +V + +A + + G++ I+ T + +++ +L A
Sbjct: 57 IRDLAPLGAREDIIRVHPGDFVDAMGEA---SPKDGLVRIDSD--TVLSPGSWEAALRAV 111
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G VD V K + F +RPPGHH + PMGFC+ VAIAAR+AQ GL
Sbjct: 112 GGACYAVDEVLEGKVQN----AFVAMRPPGHHCETRKPMGFCLLNQVAIAARHAQAKFGL 167
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
RV I+DFDVHHGNGT D F+ D + + STH+ YPGTG + E G + + +N PL
Sbjct: 168 GRVAIVDFDVHHGNGTQDIFWADDSVLYCSTHEMPLYPGTGAVSETGDAN---TIVNAPL 224
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G + I+P F PDLIL+SAG+DAH+ DPLASL+ + + +
Sbjct: 225 RSGDDGAVFKEAMETRILPRISAFSPDLILISAGFDAHIRDPLASLRLVDTDFGWVTRRL 284
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
++A C R V LEGGY+L L+ S A A +
Sbjct: 285 MEVADATCQGRVVSVLEGGYDLEGLASSAAAHVCALM 321
>gi|134288317|ref|YP_001110480.1| histone deacetylase superfamily protein [Burkholderia vietnamiensis
G4]
gi|134132967|gb|ABO59677.1| histone deacetylase superfamily [Burkholderia vietnamiensis G4]
Length = 376
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 145/274 (52%), Gaps = 23/274 (8%)
Query: 15 LKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTF-----Q 67
L N P A+ +D+ H YV + L EG G T F +
Sbjct: 60 LVNIRPELATREDLLRFHTPEYVDKIRT-----------LSEGRGGEAGEHTPFGPGGYE 108
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+ + G I+L++SV R D G++L RPPGHHA+ GFC+FGN +A R
Sbjct: 109 IACLSTGGCISLLESVY----RGDVRNGYSLNRPPGHHAVADQGRGFCIFGNGVVAIRRL 164
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEG 186
Q G+KRV ++D+DVHHGN DAFY DP + +S HQD +YP +G + E G G G G
Sbjct: 165 QAMTGVKRVAVVDWDVHHGNSAQDAFYQDPSVLTISVHQDRNYPTDSGALSERGIGAGWG 224
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+ +N+PLP GSGD A VF VIVP +KP +I+V +G+DA V+DPL + + +Y
Sbjct: 225 TNINIPLPAGSGDEAYMNVFDMVIVPALTAYKPSVIIVHSGFDASVMDPLGRMLLNSESY 284
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSY 280
+ + A LC R F EGGY+ + Y
Sbjct: 285 RKMTRKLMDAADTLCDGRLAMFHEGGYSPTHVPY 318
>gi|341894557|gb|EGT50492.1| hypothetical protein CAEBREN_16084 [Caenorhabditis brenneri]
Length = 1061
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 156/277 (56%), Gaps = 15/277 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A+ ++I VH + + L+ ++ L+E + + + Q++L
Sbjct: 478 VERNSERSATDEEIRMVHTKKMLDHLKTTESMKEEE---LMEEAQKEFNSIFLTQDTLKV 534
Query: 73 AGAGI-ALVDSVAASKNRPDPPLG-FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
A I A++ SV +P ++RPPGHHA GFC+F NVA+AA+YAQR
Sbjct: 535 ARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRR 594
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGE 185
H +KRV I+D+DVHHGNGT + FY+D ++ ++S H+ YP D +VG GDGE
Sbjct: 595 HKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMSIHRHDKGNFYPVGEPKDYFDVGEGDGE 654
Query: 186 GSTLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G T+N+P G GD + F V++P A +FKP+L+L+SAG+DA + DPL + T
Sbjct: 655 GMTVNIPFSGAPMGDLEYQMAFQRVVLPIAYQFKPELVLISAGFDAAIDDPLGEYKVTPE 714
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
T+ ++ + LA R + LEGGYNL S+S S
Sbjct: 715 TFALMTYQLSSLA----SGRVITVLEGGYNLTSISNS 747
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 136/285 (47%), Gaps = 15/285 (5%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
D++ H + ++ L + ++ ++ E Y T ++S AA G+A V +
Sbjct: 70 DLSITHEKEMIAKLMEIENKTQEEINKECEKFDSIYMT----EKSQKAARDGVACVRELT 125
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ GFA+IRPPGHHA P GFC++ N + AA A +G +R+ I+D DVH
Sbjct: 126 NRIMANEASNGFAIIRPPGHHADRDNPSGFCIYNNASQAAEEA-FFNGAERILIVDLDVH 184
Query: 145 HGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-PGGSG 198
HGNGT FY D + S H + G Y D +G G G G NLPL G
Sbjct: 185 HGNGTQRMFYHDKRVLVFSIHRYEHGLYWPHLRESNFDRIGSGQGIGYNANLPLNEEGCT 244
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D+ ++ V++P A +F P ++VSAG+D+ DPL + T Y ++K LA+
Sbjct: 245 DSDYLSILFHVLLPLATQFDPHFVIVSAGFDSLAGDPLGGMLLTPDAYSHFIYHLKSLAQ 304
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA 303
R + LEGGYN + + + LG + + PA
Sbjct: 305 ----GRMLVVLEGGYNHQVSAVAAQKCIKVLLGHAPRPVDLTEPA 345
>gi|431899553|gb|ELK07516.1| Histone deacetylase 10 [Pteropus alecto]
Length = 679
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 153/280 (54%), Gaps = 14/280 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YV+ L + + L Y +TF + A GAG+ LV
Sbjct: 45 ASEAELGLVHSPEYVALLRETQALGTGALKALSGQYDAVYFHPSTFHCARLAVGAGLQLV 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V R G AL+RPPGHH+ GFCVF NVAIAA++AQ+ HGL R+ I+D
Sbjct: 105 DAVLTGTVRN----GLALVRPPGHHSQRAAANGFCVFNNVAIAAKHAQQKHGLHRILIVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGK--IDEVGRGDGEGSTLNLPLPG 195
+D+HHG G F DDP + + S H+ +P + D VGRG G G T+NLP
Sbjct: 161 WDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRCWPHLRESDADAVGRGPGRGFTVNLPWNQ 220
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A++
Sbjct: 221 VGLGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AHLT 276
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
QL + L G R LEGGY+L SLS SV +A LG+P+
Sbjct: 277 QLLQVLAGGRVCAMLEGGYHLESLSLSVCMMVQALLGDPA 316
>gi|289549122|ref|YP_003474110.1| histone deacetylase [Thermocrinis albus DSM 14484]
gi|289182739|gb|ADC89983.1| Histone deacetylase [Thermocrinis albus DSM 14484]
Length = 309
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/232 (43%), Positives = 134/232 (57%), Gaps = 6/232 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA A +++ +L A G + +D + + F +RPPGHHA MGFC+F
Sbjct: 82 TYANAMSYEVALYAVGGVLEGIDRLLNGELEA----VFCAVRPPGHHAERSKAMGFCIFN 137
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVA+ A Y G+K+VFIIDFD HHGNGT +FY+D +F+ STH+ YPGTG DE
Sbjct: 138 NVAVGAHYLIN-RGIKKVFIIDFDAHHGNGTQRSFYEDDRVFYFSTHEYPFYPGTGSADE 196
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G G G T N+P+ G+GD V+ E++ + FKP+ +LVSAGYD H DPL
Sbjct: 197 RGAGRGYGFTYNVPMKAGAGDEEYLRVYKEILPALVKDFKPEFLLVSAGYDLHKDDPLTY 256
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L TT + ++I ++K L + LEGGYNL LS VAD+ L
Sbjct: 257 LDVTTEGIREIVSSIVNVSKALSIP-LLLALEGGYNLRVLSECVADTLEILL 307
>gi|300023490|ref|YP_003756101.1| histone deacetylase superfamily protein [Hyphomicrobium
denitrificans ATCC 51888]
gi|299525311|gb|ADJ23780.1| histone deacetylase superfamily [Hyphomicrobium denitrificans ATCC
51888]
Length = 314
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 153/280 (54%), Gaps = 18/280 (6%)
Query: 16 KNFSPASVDD---IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ +P DD +A H + YV GL++ + ++G I+G T + +++ + A
Sbjct: 44 RRLAPLRDDDLDFVALAHRQDYVQGLKRFAE-TVKEGQHHIDGD--TVVSPGSWEAARRA 100
Query: 73 AGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
GAG+ VD V A+ N F +RPPGHHA MGFC+F N+A+AA YA+
Sbjct: 101 VGAGLDAVDHVVSGAAAN------AFCQVRPPGHHAESNLAMGFCLFNNIAVAAHYARAK 154
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
HG++RV ++DFDVHHGNGT + F+ + ++F+ STHQ +PGTG + E G G+ N
Sbjct: 155 HGVERVAVVDFDVHHGNGTQEIFWSNKNLFYGSTHQMPLFPGTGALQET----GAGNIFN 210
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
PL G G F + I+ F PDLI++SAG+DAH DPL L+ +
Sbjct: 211 APLRAGDGRYHFEEAFRDRILAPLHNFAPDLIMISAGFDAHQRDPLGGLELVEEDFRWAT 270
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ +LA+ R V LEGGY+L L+ SVA A +
Sbjct: 271 EAVAELARRHANGRLVSILEGGYDLRGLAQSVAVHVSALM 310
>gi|85001508|ref|XP_955470.1| histone deacetylase family protein [Theileria annulata strain
Ankara]
gi|65303616|emb|CAI75994.1| histone deacetylase family protein, putative [Theileria annulata]
Length = 878
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
S N D GFAL+RPPGHHA P MGFC++ NVAIAARY Q GLKRV I+D+DVHH
Sbjct: 199 SSNNSDLGKGFALVRPPGHHATPDKMMGFCIYNNVAIAARYLQHKFGLKRVAIVDWDVHH 258
Query: 146 GNGTNDAFYDDPDIFFLSTH-----QDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
GNGT D FYDD + F+S H +D YP TG DE+G G G G +N+PL +
Sbjct: 259 GNGTQDIFYDDNSVCFISLHRYGDNEDSFYPYTGYCDEIGVGKGYGYNVNIPLEKSFTNA 318
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ F++V++P + F+P+ I+VSAG+D+ + D L + + QLA+
Sbjct: 319 DLVHSFNKVVIPVLELFEPEFIIVSAGFDSGIDDLLGGCNLDWDGFSWATFKLCQLAEKY 378
Query: 261 CGSRCVFFLEGGYNLNSLSYSV 282
R + LEGGY L+ LS V
Sbjct: 379 SNGRLLLSLEGGYTLSRLSEDV 400
>gi|448312149|ref|ZP_21501899.1| histone deacetylase [Natronolimnobius innermongolicus JCM 12255]
gi|445602656|gb|ELY56628.1| histone deacetylase [Natronolimnobius innermongolicus JCM 12255]
Length = 344
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 156/289 (53%), Gaps = 22/289 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ A
Sbjct: 38 VEYVEADPCDLDRMAAVHDREYLESVRE----------FCADGGGSWDPDTTAVEETWDA 87
Query: 73 AG-----AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
A A+ +++ + R P F++ RPPGHHA+ MGFC N A+AA+YA
Sbjct: 88 VRHSTGLACWAVDEALEGATGRETP---FSIGRPPGHHAVYDDAMGFCFVNNAAVAAQYA 144
Query: 128 --QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+ + RV I+D+DVHHGNGT D FYD D++F+S H+ G YPGTG IDE G G
Sbjct: 145 LDTDEYDVDRVAIVDWDVHHGNGTQDIFYDREDVYFVSIHEQGLYPGTGAIDETGEDAGA 204
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+N+P+P G+ D IV F PDL+L+SAG+DAH DP++ ++ +T
Sbjct: 205 GTTMNVPMPAGTDDGEYLAAVEGPIVRALTDFDPDLLLISAGFDAHRHDPISRIRLSTEA 264
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
Y ++A ++ LA + F LEGGY L+ L+ SVA F G EP
Sbjct: 265 YALMADRLRTLAA-DVDAALAFILEGGYGLDVLADSVAIVHETFDGREP 312
>gi|341884216|gb|EGT40151.1| hypothetical protein CAEBREN_23214 [Caenorhabditis brenneri]
Length = 1054
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 156/277 (56%), Gaps = 15/277 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A+ ++I VH + + L+ ++ L+E + + + Q++L
Sbjct: 471 VERNSERSATDEEIRMVHTKKMLDHLKTTESMKEEE---LMEEAQKEFNSIFLTQDTLKV 527
Query: 73 AGAGI-ALVDSVAASKNRPDPPLG-FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
A I A++ SV +P ++RPPGHHA GFC+F NVA+AA+YAQR
Sbjct: 528 ARKAIGAVLQSVDEIFEKPAGLRNALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRR 587
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGE 185
H +KRV I+D+DVHHGNGT + FY+D ++ ++S H+ YP D +VG GDGE
Sbjct: 588 HKIKRVLILDWDVHHGNGTQEIFYEDGNVMYMSIHRHDKGNFYPVGEPKDYFDVGEGDGE 647
Query: 186 GSTLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G T+N+P G GD + F V++P A +FKP+L+L+SAG+DA + DPL + T
Sbjct: 648 GMTVNIPFSGAPMGDLEYQMAFQRVVLPIAYQFKPELVLISAGFDAAIDDPLGEYKVTPE 707
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
T+ ++ + LA R + LEGGYNL S+S S
Sbjct: 708 TFALMTYQLSSLA----SGRIITVLEGGYNLTSISNS 740
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 136/285 (47%), Gaps = 15/285 (5%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
D++ H + ++ L + ++ ++ E Y T ++S AA G+A V +
Sbjct: 70 DLSITHEKEMIAKLMEIENKTQEEINKECENFDSIYMT----EKSQKAARDGVACVRELT 125
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ GFA+IRPPGHHA P GFC++ N + AA A +G +R+ I+D DVH
Sbjct: 126 NRIMANEASNGFAIIRPPGHHADRDNPSGFCIYNNASQAAEEA-FFNGAERILIVDLDVH 184
Query: 145 HGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-PGGSG 198
HGNGT FY D + S H + G Y D +G G G G NLPL G
Sbjct: 185 HGNGTQRMFYHDKRVLVFSIHRYEHGLYWPHLRESNFDRIGSGQGIGYNANLPLNEEGCT 244
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D+ ++ V++P A +F P ++VSAG+D+ DPL + T Y ++K LA+
Sbjct: 245 DSDYLSILFHVLLPLATQFDPHFVIVSAGFDSLAGDPLGGMLLTPDAYSHFIYHLKSLAQ 304
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA 303
R + LEGGYN + + + LG + + PA
Sbjct: 305 ----GRMLVVLEGGYNHQVSAVAAQKCIKVLLGHAPRPVDLTEPA 345
>gi|186470598|ref|YP_001861916.1| histone deacetylase superfamily protein [Burkholderia phymatum
STM815]
gi|184196907|gb|ACC74870.1| histone deacetylase superfamily [Burkholderia phymatum STM815]
Length = 315
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/271 (38%), Positives = 154/271 (56%), Gaps = 11/271 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
+V+ + +H + ++ ++ + A G + ++G G T + +++ + GA A VD
Sbjct: 52 TVEQVQLIHRQDFI---DEVAESAPSHGYMPLDG-GDTVMSPGSWEAVMRCVGAACAGVD 107
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V A + R F RP GHHA P MGFC+F AIAA YA H L+RV ++DF
Sbjct: 108 AVLAGEARN----VFCATRPCGHHAEPSKAMGFCIFNQAAIAAAYAYEVHKLERVAVVDF 163
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT AFY+ P++F+ S+HQ YPGTGK E G + LN+PLP G
Sbjct: 164 DVHHGNGTQAAFYNRPELFYASSHQSPLYPGTGKAAETGVSH---NVLNVPLPPGCDSQL 220
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R+ ++P + F P+L+++SAG+DAH LDPLA+L+ +Y + + ++A D C
Sbjct: 221 FRSRIELDMLPALREFNPELVIISAGFDAHRLDPLAALRLDDDDFYWITRELVKIADDTC 280
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
G R V LEGGY++ LS A +G+
Sbjct: 281 GGRIVSILEGGYSMEGLSGGTRAHVLALMGQ 311
>gi|330467195|ref|YP_004404938.1| histone deacetylase superfamily protein [Verrucosispora maris
AB-18-032]
gi|328810166|gb|AEB44338.1| histone deacetylase superfamily protein [Verrucosispora maris
AB-18-032]
Length = 377
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 131/228 (57%), Gaps = 5/228 (2%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG I LV +VA R + G+AL RPPGHHA MGFC+F N+A+AAR+AQ
Sbjct: 114 AAGGLIELVTAVA----RGEVTNGYALTRPPGHHATADRGMGFCLFNNIAVAARHAQAEL 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
GL R+ I+D+DVHHGNGT FY DP + +S HQ G + P +G I E G GDG G +N
Sbjct: 170 GLTRIAIVDWDVHHGNGTQSIFYTDPSVLTISLHQAGCFPPDSGWIRENGAGDGTGYAIN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G+G E+++P +RF PDLIL++ G+DA+V DP+A T +Y +
Sbjct: 230 VPLPPGTGHAGYLHAMTEIVLPALERFAPDLILLANGFDANVFDPMARQMLTAASYRAMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
+ A LC R V EGGY+ + Y G ++ ++
Sbjct: 290 RMLTDAADRLCHGRLVAAHEGGYSPFYVPYCALAFLEELAGTTTRVTD 337
>gi|300088549|ref|YP_003759071.1| histone deacetylase superfamily protein [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299528282|gb|ADJ26750.1| histone deacetylase superfamily [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 309
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 111/273 (40%), Positives = 154/273 (56%), Gaps = 17/273 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ +++A+VH Y L A S G + ++ T + ++Q ++ AAG+ +A
Sbjct: 50 PATAEELAAVHTADY---LRVAELLGSNGGALDLD----TVLSPGSWQAAVTAAGSAVAA 102
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V++V N F L RPPGHHA + GFC+ N+AIA R A GL+R II
Sbjct: 103 VEAV---TNGGVDSGCFLLSRPPGHHAFAERGSGFCLLNNIAIATRAALERFGLERAAII 159
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
D+DVHHGNGT F DDP + +S HQ YPGTG + G E + LN+PLP GSGD
Sbjct: 160 DWDVHHGNGTQAIFQDDPAVRCVSLHQYPHYPGTGAAGDTGP---EANRLNIPLPAGSGD 216
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
A F E++ P +PD+ILVSAGYDAH DPL++++ T + + +K +A+
Sbjct: 217 EAYLKAFDELVAPAVAAHRPDIILVSAGYDAHRDDPLSAMEVTAEGFAGMTRRVKTMAER 276
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
R VF LEGGY+ +L A+S A LGE
Sbjct: 277 YSHGRLVFVLEGGYHHRAL----AESVSATLGE 305
>gi|335032697|ref|ZP_08526072.1| deacetylase [Agrobacterium sp. ATCC 31749]
gi|333795872|gb|EGL67194.1| deacetylase [Agrobacterium sp. ATCC 31749]
Length = 311
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA +A VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYLSPKSLQAALTGIGAAMAAVDDVFTGAADNV------FVAARPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F NVAIAAR+AQ+AHG +R+ IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNVAIAARHAQKAHGAERIAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLIL+SAG+DAH DPL
Sbjct: 199 NETGV---KNNIINAPLSPNTGSDHFREAFKSRVLPAIADFSPDLILISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAA 302
>gi|402566270|ref|YP_006615615.1| histone deacetylase family protein [Burkholderia cepacia GG4]
gi|402247467|gb|AFQ47921.1| histone deacetylase family protein [Burkholderia cepacia GG4]
Length = 371
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 149/264 (56%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ D+ +H +Y+ D G + G G +++ +
Sbjct: 63 LDMRGAAPATTGDLLRIHPASYLDAFRALSDANGGDLGDLAPFGKG-------SYEIAAL 115
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA VD+V + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 116 SAGLAIAAVDAVVTERAAN----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAQH 171
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDPD +S HQD + PG + G G G G+ LN
Sbjct: 172 GIDRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGGGDRGEGAGVGANLN 231
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P ++F+P+LI+V++G DA +DPLA +Q T +Y +
Sbjct: 232 VPLLAGSGDDAYRYAFERIVLPALEQFRPELIIVASGLDASAVDPLARMQLHTDSYRFMT 291
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 292 RAVKKAAQRHCGGRLVIVHEGGYS 315
>gi|254462443|ref|ZP_05075859.1| histone deacetylase superfamily [Rhodobacterales bacterium
HTCC2083]
gi|206679032|gb|EDZ43519.1| histone deacetylase superfamily [Rhodobacteraceae bacterium
HTCC2083]
Length = 313
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 151/269 (56%), Gaps = 15/269 (5%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
S DDI H ++V+ L A+ + + T+ + + + A GA VD
Sbjct: 48 SEDDIMRCHPASHVTDLRSALPNVGHRQL-----DADTHMSPGSLDAAFRAVGAVTKAVD 102
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
V + FA IRPPGHH PMGFC+FGNVAI A+YA HGLKRV ++DF
Sbjct: 103 MVMNGEAGN----AFAAIRPPGHHCETSTPMGFCLFGNVAIGAKYALEHHGLKRVAVVDF 158
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNGT D +++ +++ Q +PGTG+ + G G + +NLP+ S
Sbjct: 159 DVHHGNGTQDLLWNEKRALTITSQQMPLWPGTGERSDKG---GFDNVVNLPIAPESKGDQ 215
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
M ++ + P + FKP++I +SAG+DAH DPLA+L ++TG + L + ++A ++C
Sbjct: 216 MCALYTAEVFPRLRAFKPEMIFISAGFDAHQYDPLANLNWSTGDFKWLTQELCKIADEIC 275
Query: 262 GSRCVFFLEGGYNLNSLSYSVA---DSFR 287
R V LEGGY+L++L+ +VA D+ R
Sbjct: 276 EGRVVSALEGGYDLDALAEAVAAHVDALR 304
>gi|340718184|ref|XP_003397551.1| PREDICTED: histone deacetylase 6-like [Bombus terrestris]
Length = 1160
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 160/279 (57%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH++ Y+ ++ + ++ E Y T+ + + G+ + +V
Sbjct: 584 ATREELILVHSKEYIDSIKDTENLKPKELKKQAETYNSVYLHPETWTSACISTGSLLQVV 643
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV +++ G A++RPPGHHA GFC+F N+AIAA+YA H +KRV I+D
Sbjct: 644 DSVLNGESQS----GIAIVRPPGHHAGENIACGFCIFNNIAIAAKYAVEFHHVKRVLIVD 699
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +DP + ++S H+ +G+ +P + + + VG GEG T+N+P
Sbjct: 700 WDVHHGNGTQSIFEEDPKVLYISVHRYDNGNFFPNSKRANYSYVGSLSGEGFTVNIPWNK 759
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A +F P+L+LVSAG+DA + DPL T Y L +
Sbjct: 760 KGMGDAEYIAAFQQIIMPIAYQFNPELVLVSAGFDACIGDPLGGCFVTPEMYGHLTHWLS 819
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+++++A ++ LG+P
Sbjct: 820 SLA----NGRIILSLEGGYNINSIAHAMAICTKSLLGDP 854
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 17/281 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS--GPTYATATTFQESLAAAGAGIA 78
AS D+I H++ + L KA D + + + S Y +T+Q SL A G+ I
Sbjct: 156 ASEDEILMKHSQEQIDIL-KATDECTDVDSLELLSSTYDAIYIHPSTYQLSLLAVGSTIN 214
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
LV+S+ + + G A+IRPPGHHA+ G+C F NVAIAA ++ ++ I
Sbjct: 215 LVESIC----KEEIQNGMAIIRPPGHHAMKSEYCGYCFFNNVAIAAEKVLSSNLASKILI 270
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+D+HHG T FY+DP + + S H ++G +P VG G GEG N+PL
Sbjct: 271 VDWDIHHGQATQQMFYNDPRVIYFSIHRYENGEFWPNLRESNFHFVGDGLGEGYNFNVPL 330
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G + +F +V++P A F+PDLI+VSAGYDA + P + T Y A+
Sbjct: 331 NKTGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALGCPEGEMLLTPACY----AH 386
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ L + LEGGY L SL+ S A + R LG+P
Sbjct: 387 LLSSLLSLAAGKVAVILEGGYCLKSLAESAALTLRTLLGDP 427
>gi|270307703|ref|YP_003329761.1| acetoin utilization protein/histone deacetylase [Dehalococcoides
sp. VS]
gi|270153595|gb|ACZ61433.1| acetoin utilization protein/histone deacetylase [Dehalococcoides
sp. VS]
Length = 341
Score = 183 bits (465), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 150/273 (54%), Gaps = 23/273 (8%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAGAGIALV 80
++ S H R+Y+S +E+ + G G T + +++ +L A G I V
Sbjct: 54 ELESFHKRSYISRVEE----------VGFSGGGWLDQDTVISVDSYEAALYAVGGVIEGV 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + F L RPPGHHA+P+ MGFCVF NVA+ A +A H LKRV ++D
Sbjct: 104 DKVLSGELES----AFVLCRPPGHHALPEASMGFCVFNNVALGALHALNKHKLKRVAVVD 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE-GSTLNLPLPGGSGD 199
FDVHHGNG +DP + ++STHQ +P TG R DG + LN+PLP G GD
Sbjct: 160 FDVHHGNGIQHVCLNDPRVTYISTHQIHHFPFTGD----SREDGPFQNILNIPLPEGCGD 215
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+ + F EVI P ++F P+LILV AGYDAH D + + + + + ++K+ A++
Sbjct: 216 SHYQKAFDEVICPYLRKFAPELILVCAGYDAHFADDMGEMCLSQKGFAGITRSLKKTAEE 275
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+C + VF LEGGY+ L+ V + L E
Sbjct: 276 VCRGKLVFSLEGGYHYLGLAEGVGATLSVLLNE 308
>gi|387126712|ref|YP_006295317.1| acetylspermidine deacetylase [Methylophaga sp. JAM1]
gi|386273774|gb|AFI83672.1| Acetylspermidine deacetylase [Methylophaga sp. JAM1]
Length = 329
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 5/211 (2%)
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPM-GFCVFGNVAIAAR 125
Q ++ A G + VD+V K D F RPPGHHA G GFC + +VAIAAR
Sbjct: 102 QAAMLATGGVLVAVDAVC--KGLLDN--AFCASRPPGHHATNTGKEEGFCYYNHVAIAAR 157
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
YAQ+ +GLKR+ I+D+D HHGNGT AFY D + F STH +YPGTG ++ G G G+
Sbjct: 158 YAQKRYGLKRILIVDWDYHHGNGTEWAFYHDASVLFFSTHDAEAYPGTGSPEKTGTGSGK 217
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G +N+ LP GSGD + + F E ++P FKPDLIL+SAG+D+ D L + +
Sbjct: 218 GFNINVHLPCGSGDAEIISAFEEKLIPAVTEFKPDLILISAGFDSREEDLLGCYKVSDQG 277
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
+ L + +LAK C + V LEGGYNL
Sbjct: 278 FIQLTEIMLRLAKQHCDGKLVSVLEGGYNLT 308
>gi|311256822|ref|XP_003126824.1| PREDICTED: histone deacetylase 10-like [Sus scrofa]
Length = 671
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 163/307 (53%), Gaps = 20/307 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YV+ L ++++ L Y +TF + AAGA + LV
Sbjct: 55 ASEAELGLVHSPEYVALLRGTQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V A R G AL+RPPGHH+ GFCVF +VAIAA++AQ+ HGL R+ I+D
Sbjct: 115 DAVMAGVVRN----GLALVRPPGHHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+D+HHG GT F DDP + + S H+ Y D VGRG G G T+NLP
Sbjct: 171 WDIHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F +V++P A F +L+LVSAG+D+ + D +Q T + A++
Sbjct: 231 VGMGNADYMAAFLQVLLPLAFEFNAELVLVSAGFDSAIGDSEGQMQATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
QL + L G R LEGGY+L SLS SV +A LG+P A P + P
Sbjct: 287 QLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVQALLGDP--APPLSGPMV----PHGSAL 340
Query: 315 QAIERVK 321
Q+I+ V+
Sbjct: 341 QSIQSVR 347
>gi|290510247|ref|ZP_06549617.1| histone deacetylase [Klebsiella sp. 1_1_55]
gi|289776963|gb|EFD84961.1| histone deacetylase [Klebsiella sp. 1_1_55]
Length = 371
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 27/303 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGY--------------NLNSLSYSVADSFRAFLGEPSKA 296
++Q A LCG + V EGGY L+ + V D R F+ +
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGIRTEVQDPLREFIQQQQPR 350
Query: 297 SEF 299
+EF
Sbjct: 351 AEF 353
>gi|332529044|ref|ZP_08405009.1| histone deacetylase superfamily protein [Hylemonella gracilis ATCC
19624]
gi|332041488|gb|EGI77849.1| histone deacetylase superfamily protein [Hylemonella gracilis ATCC
19624]
Length = 310
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/287 (39%), Positives = 156/287 (54%), Gaps = 14/287 (4%)
Query: 4 TSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
T EF G+ ++ + D + VH YV + D + +QG L++G G T +
Sbjct: 36 TPEFSGAV---WRDAPLGNYDQVLLVHTPEYV---REVQDLSPKQGYQLLDG-GDTIMSP 88
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
T + + GA A VD V + F RP GHHA MGFCVF AIA
Sbjct: 89 GTLEAVMRCVGAACAGVDDVVSGVASNV----FCATRPCGHHAEAGHAMGFCVFNQAAIA 144
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
A +A+ AHG++RV ++DFDVHHGNGT + FYDDP++F+ S HQ YPGTG E G D
Sbjct: 145 ALHARAAHGIRRVAVVDFDVHHGNGTQNTFYDDPELFYGSCHQSNFYPGTGLRHETGVAD 204
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
+ +N+P G+G A R + ++P + F P+L+++SAG+DAH LDPL LQFT
Sbjct: 205 ---NIVNVPFARGTGSAAFRAAMSDHLLPALREFAPELLIISAGFDAHELDPLGGLQFTD 261
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Y + + ++A + R V LEGGY+L L+ A RA L
Sbjct: 262 EDYLWITHELMRVADETAAGRVVSVLEGGYSLEGLAGGTAAHVRALL 308
>gi|261190666|ref|XP_002621742.1| histone deacetylase [Ajellomyces dermatitidis SLH14081]
gi|239591165|gb|EEQ73746.1| histone deacetylase [Ajellomyces dermatitidis SLH14081]
Length = 800
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 151/281 (53%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH + ++ + ++ I L Y + TF S+ + G I
Sbjct: 199 ATEEEISLVHDTEHYDFVKSTKYMSEEELIALEHTRDSIYFNSLTFTSSILSCGGAIETC 258
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK--RVFI 138
+V + + + A+IRPPGHHA MGFC+F NV +AAR QR G K ++ I
Sbjct: 259 KAVVSGQVKN----AIAVIRPPGHHAEQNKTMGFCLFNNVCVAARVCQREFGEKCRKILI 314
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP+I ++S H +DGS YPG G D G G+G G +N+P
Sbjct: 315 LDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGGEEGNWDHCGEGNGLGKNINIPW 374
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P A F PDL+++SAG+DA D L T Y A+
Sbjct: 375 PTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----AH 430
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ ++ ++ G + LEGGYN S+S S R +GEP
Sbjct: 431 MTRMLMNVAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 471
>gi|378825153|ref|YP_005187885.1| histone deacetylase family protein [Sinorhizobium fredii HH103]
gi|365178205|emb|CCE95060.1| histone deacetylase family protein [Sinorhizobium fredii HH103]
Length = 309
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 147/279 (52%), Gaps = 20/279 (7%)
Query: 13 IELKNFSP--------ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT 64
+E NF+P S + + H ++ + +A+ + I IE TYA+ +
Sbjct: 34 LEHPNFAPLKRIEALKGSAELVLLAHTEEHLRSIARAI---PEDDINQIEAD--TYASPS 88
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
+F+ +L GI + + + F RPPGHHA MGFC F +AIAA
Sbjct: 89 SFEAALT----GIGGAVAAVDAVFAGEADNAFVAARPPGHHAEKNRAMGFCFFNTIAIAA 144
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
R+AQ+AHG++R+ IID+DVHHGNGT D F++DP + F STHQ YPGTG +E G
Sbjct: 145 RHAQKAHGVERIAIIDWDVHHGNGTQDIFWNDPSVLFCSTHQMPLYPGTGAREETGV--- 201
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+ +N PL SG R F ++ F+PDL+L+SAG+DAH DPLA +
Sbjct: 202 RNNIVNAPLSPNSGSEHFRDAFRSRVLVALDNFRPDLVLISAGFDAHYRDPLAQINLVAE 261
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ + + A G+R V LEGGY+L L+ S A
Sbjct: 262 DFDWATGRLMEAAGKSAGNRVVSMLEGGYDLQGLAESAA 300
>gi|171911106|ref|ZP_02926576.1| histone deacetylase superfamily protein [Verrucomicrobium spinosum
DSM 4136]
Length = 316
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 147/272 (54%), Gaps = 9/272 (3%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ D+I H R Y+ ++ D A + + +G T + + + A G+ +
Sbjct: 53 PATDDEILLCHTREYLETAKR--DVAGGRSDL---STGDTAICPRSLEVARHATGSVVEA 107
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD+V K + F +RPPGHHA P MGFC+F N+A+ AR AQ+ HG RV I+
Sbjct: 108 VDAVMTGKLKN----AFCAVRPPGHHARPAQGMGFCLFNNIAVGARVAQKKHGAGRVLIV 163
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
D+DVHHGNGT D FY D + F STHQ YP TG +E G G G+G LN P P G+G
Sbjct: 164 DWDVHHGNGTQDIFYADGSVIFASTHQAPWYPYTGWAEEKGEGKGKGMILNFPFPAGAGY 223
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+ I+ A R KPDL+++SAG+D+ V DPL Q T + L + + A +
Sbjct: 224 GEIGGALEHHILQEAARLKPDLVMISAGFDSRVDDPLGQFQLTDANFAALTKTLMRFADE 283
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
C R V LEGGYNL+ L +V A G
Sbjct: 284 HCSGRLVSVLEGGYNLDGLGKAVTAHVTALSG 315
>gi|254453823|ref|ZP_05067260.1| histone deacetylase family protein [Octadecabacter arcticus 238]
gi|198268229|gb|EDY92499.1| histone deacetylase family protein [Octadecabacter arcticus 238]
Length = 366
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 149/267 (55%), Gaps = 19/267 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE---S 69
+++++ A+ +D+ VH +Y+ + D G T F
Sbjct: 60 LDMRHAPAATTEDLLRVHPASYLDTFKATSD-----------AGGGELGRRTPFGPGGYE 108
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+AA AG+++ A K +AL RPPGHH +P P GFC+ N+A+A + A R
Sbjct: 109 MAALSAGLSIAALQAVLKGELTN--AYALSRPPGHHCLPDFPNGFCLLANLALAIQSA-R 165
Query: 130 AHGL-KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGS 187
A GL +RV ++D+DVHHGNGT FYDDPD+ +S HQD +YP TG + GRG G G
Sbjct: 166 AKGLAQRVVVLDWDVHHGNGTEAIFYDDPDVLTISMHQDRNYPMDTGDFADRGRGKGAGF 225
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
LN+PLP G+G + +++P Q FKPD+I+++ GYDA +DPL + T T+
Sbjct: 226 NLNIPLPPGTGHIGYLSTMERIVIPQVQAFKPDVIVIACGYDAAAIDPLGRMLATAQTFQ 285
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYN 274
++ +K LA+DLCG R + EGGY+
Sbjct: 286 VMTQQVKSLAEDLCGGRLMMAHEGGYS 312
>gi|338739779|ref|YP_004676741.1| histone deacetylase [Hyphomicrobium sp. MC1]
gi|337760342|emb|CCB66173.1| Histone deacetylase family protein [Hyphomicrobium sp. MC1]
Length = 314
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 131/232 (56%), Gaps = 8/232 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T A+A T++ + A GAG+ VD V K F +RPPGHHA MGFC F
Sbjct: 87 TIASAGTWEAARRAVGAGLDAVDLVMEGKVTN----AFCQVRPPGHHAESNRAMGFCFFN 142
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N+AIAA YA+ +G +RV ++DFDVHHGNGT + F+ D D+F+ STHQ +PGTG ++E
Sbjct: 143 NIAIAAHYARAKYGAERVAVVDFDVHHGNGTQEIFWSDKDLFYGSTHQMPLFPGTGALNE 202
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G+ N PL G G A F I+ F PD++L+SAG+DAH DPLA
Sbjct: 203 TGVGN----IFNAPLRSGDGREAFEEAFRSRILTPLHNFSPDVLLISAGFDAHQRDPLAG 258
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L+ + + ++A+ R V LEGGY+L L+ S A +A L
Sbjct: 259 LELVEEDFRWATEALAEMARRHAKGRIVSMLEGGYDLKGLALSTAAHVKALL 310
>gi|340355419|ref|ZP_08678106.1| histone deacetylase [Sporosarcina newyorkensis 2681]
gi|339622506|gb|EGQ27026.1| histone deacetylase [Sporosarcina newyorkensis 2681]
Length = 394
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 151/265 (56%), Gaps = 15/265 (5%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRAS-QQGIILIEGSGPTYATATTFQESL 70
+L+ P A+ ++I HA YV ++K D G I G G +++ +L
Sbjct: 76 KLEQIEPRSATKEEIEYFHAPEYVERVKKLSDTTGGDAGDHAIVGRG-------SYEIAL 128
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
+ G + VD+V + +A+ RPPGHHA + +GFC+F NVAIAA+YA++
Sbjct: 129 LSTGGALRAVDAVMEGEVNNV----YAMTRPPGHHAEREKGIGFCIFNNVAIAAQYARKK 184
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTL 189
+GLKRV ++D+DVHHGNGT AFY+DP++ F S HQ S+P TG ++VG G G +
Sbjct: 185 YGLKRVLVLDWDVHHGNGTEQAFYEDPNVLFFSIHQHLSFPNNTGFKEDVGAVAGRGYNV 244
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP G+GD F ++ P A FKP+L+++SAG D + DPL + T + L
Sbjct: 245 NIPLPPGTGDAGYVHAFKSIVEPIAAEFKPELVIISAGQDPGMFDPLGRMMMTAEGFGQL 304
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYN 274
+ ++A C + VF EGGY+
Sbjct: 305 TDCMLRIADTYCDGKIVFCHEGGYS 329
>gi|418939327|ref|ZP_13492727.1| histone deacetylase superfamily [Rhizobium sp. PDO1-076]
gi|375053986|gb|EHS50381.1| histone deacetylase superfamily [Rhizobium sp. PDO1-076]
Length = 311
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/223 (43%), Positives = 125/223 (56%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ + Q +L A G ++ VD V K F RPPGHHA MGFC+F
Sbjct: 85 TYASPKSLQVALTAIGGALSAVDDVMTGKADN----AFVAGRPPGHHAEKSKAMGFCLFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
VAIAAR+AQ +G++RV I+D+DVHHGNGT D F+DDP + F STHQ YPGTG DE
Sbjct: 141 TVAIAARHAQTVYGVERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPGTGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G + + +N PL G R F ++ F PDLIL+SAG+DAH DPLA
Sbjct: 201 TGT---KNNIVNAPLSPNVGSDHFREAFKSRVLTALHDFSPDLILISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + ++A +R V LEGGY+L L+ S
Sbjct: 258 INLVGEDFDWATGRLLEVADRFAKNRVVSLLEGGYDLEGLAES 300
>gi|239614851|gb|EEQ91838.1| histone deacetylase [Ajellomyces dermatitidis ER-3]
Length = 806
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 151/281 (53%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH + ++ + ++ I L Y + TF S+ + G I
Sbjct: 205 ATEEEISLVHDTEHYDFVKSTKYMSEEELIALEHTRDSIYFNSLTFTSSILSCGGAIETC 264
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK--RVFI 138
+V + + + A+IRPPGHHA MGFC+F NV +AAR QR G K ++ I
Sbjct: 265 KAVVSGQVKN----AIAVIRPPGHHAEQNKTMGFCLFNNVCVAARVCQREFGEKCRKILI 320
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP+I ++S H +DGS YPG G D G G+G G +N+P
Sbjct: 321 LDWDVHHGNGVQKAFYDDPNILYISLHVYRDGSFYPGGEEGNWDHCGEGNGLGKNINIPW 380
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P A F PDL+++SAG+DA D L T Y A+
Sbjct: 381 PTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----AH 436
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ ++ ++ G + LEGGYN S+S S R +GEP
Sbjct: 437 MTRMLMNVAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 477
>gi|307212499|gb|EFN88230.1| Histone deacetylase 6 [Harpegnathos saltator]
Length = 1136
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 157/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A++++++ VH++ Y+ ++ M ++ G Y T+ + + G+ + +V
Sbjct: 535 ATIEELSLVHSKDYIDSIKSIMTLKLKELDKEAAGYNSVYFHNETWSSACISVGSLLQIV 594
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +++ G A++RPPGHHA GFC+F NVA+AA+YA + H +K+V I+D
Sbjct: 595 DAVLNGESQS----GVAIVRPPGHHAEEDAACGFCIFNNVAVAAKYAIQFHHVKKVLIVD 650
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGK---IDEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +DP + + S H+ +GS+ + K VG GEG +N+P
Sbjct: 651 WDVHHGNGTQAIFEEDPKVLYTSVHRYDNGSFFPSSKDANYTSVGLNAGEGFNVNVPWNK 710
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F +VI+P A +F P+L+L+SAG+DA V DPL Y L +
Sbjct: 711 KGMGDVEYIAAFQQVIMPIAYQFNPELVLISAGFDACVGDPLGGCHTNPELYGHLTHWLS 770
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+S+++ +A LG+P
Sbjct: 771 SLA----NGRVILSLEGGYNINSISHAMTMCTKALLGDP 805
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 13/234 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRA--SQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
A+ ++I H++ ++ L KA D S+ +L Y +T++ SL A G+ I
Sbjct: 114 ATENEILMKHSQKHIDIL-KATDGCMDSENLELLSSKYDSIYVHPSTYRLSLLATGSTIN 172
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
L++S+ K + G A++RPPGHHA+ G+C F NVA+AA A ++ ++ I
Sbjct: 173 LIESICKGKVQN----GMAIVRPPGHHAMKSEYCGYCFFNNVALAAEKALTSNWASKILI 228
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKID--EVGRGDGEGSTLNLPL 193
+D+DVHHG T FY+DP + + S H+ +P + D VG GEG N+PL
Sbjct: 229 VDWDVHHGQATQQMFYNDPRVVYFSIHRYEYGEFWPNLRESDFHNVGEDLGEGFNFNIPL 288
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
G + VF ++++P A F+PDL++VSAGYDA + P + T Y
Sbjct: 289 NKTGMTNADYIAVFQQILLPMAYEFQPDLVIVSAGYDAALGCPEGEMLVTPACY 342
>gi|15888091|ref|NP_353772.1| deacetylase [Agrobacterium fabrum str. C58]
gi|15155719|gb|AAK86557.1| deacetylase [Agrobacterium fabrum str. C58]
Length = 311
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 129/227 (56%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA +A VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYLSPKSLQAALTGIGAAMAAVDDVFSGAADNV------FVAARPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F NVAIAAR+AQ+AHG +R+ IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNVAIAARHAQKAHGAERIAIIDWDVHHGNGTQDIFWNDISVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLIL+SAG+DAH DPL
Sbjct: 199 NETGV---KNNIVNAPLSPNTGSDHFREAFKSRVLPAIADFSPDLILISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAA 302
>gi|221215046|ref|ZP_03588013.1| histone deacetylase family protein [Burkholderia multivorans CGD1]
gi|221164982|gb|EED97461.1| histone deacetylase family protein [Burkholderia multivorans CGD1]
Length = 373
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ DD+ +H Y+ D G + G G +A
Sbjct: 61 LDMRGAAPAARDDLLRIHPAGYLDAFRALSDANGGDLGDLAPFGKG---------SYEIA 111
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A AG+A+ A R F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 112 ALSAGLAIAAVDAVVAERAAN--AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDPD +S HQD + PG G ++ G G G G+ LN
Sbjct: 170 GIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYGGAEDRGAGAGVGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI+V++G DA +DPLA + T +Y +
Sbjct: 230 VPLLAGSGDDAYRHAFERIVLPALERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|345776725|ref|XP_848669.2| PREDICTED: histone deacetylase 10 [Canis lupus familiaris]
Length = 932
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 151/281 (53%), Gaps = 18/281 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YVS L +Q+ L Y +TF + A GA + LV
Sbjct: 55 ASEAELGLVHSPEYVSLLRGTQALDTQELRALSGQYDAVYFHPSTFHCARLAVGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVAIAAR+AQ+ HGL+R+ I
Sbjct: 115 DAVLMGAVHN------GLALVRPPGHHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ Y D VG+G G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + +
Sbjct: 229 NQVGMGNADYLAAFLHVLLPVAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----GH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ QL + L G R LEGGY+L SLS SV RA LG+P
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVRALLGDP 325
>gi|390568202|ref|ZP_10248512.1| histone deacetylase superfamily protein [Burkholderia terrae BS001]
gi|389939892|gb|EIN01711.1| histone deacetylase superfamily protein [Burkholderia terrae BS001]
Length = 311
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 158/279 (56%), Gaps = 11/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E ++ +++ + +H++ ++ ++ D A + G + ++G G T + +++ +
Sbjct: 43 LEWRDAPMGTLEQVQFIHSQDFI---DEVADIAPKHGYMPLDG-GDTVMSPGSWEAVMRC 98
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA A VD+V R F RP GHHA P MGFC+F AIAA YA H
Sbjct: 99 VGAACAGVDAVLNKDARN----VFCATRPCGHHAEPGKAMGFCIFNQAAIAAAYAYDVHK 154
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+RV ++DFDVHHGNGT AFYD P++F+ S+HQ YPGTGK E G + LN+P
Sbjct: 155 LERVAVVDFDVHHGNGTQAAFYDRPELFYASSHQSPLYPGTGKSAETGVSH---NILNVP 211
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G R+ ++P + F+P+LI++SAG+DAH LDPLA+L+ ++ +
Sbjct: 212 LPPGCDSDLFRSRIEADMLPAVREFRPELIIISAGFDAHRLDPLAALRLDDDDFHWITRE 271
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ ++A + C R V LEGGY++ LS RA +G
Sbjct: 272 LVRIADETCEGRVVSILEGGYSMEGLSGGTRAHVRALMG 310
>gi|126664446|ref|ZP_01735430.1| histone deacetylase family protein [Marinobacter sp. ELB17]
gi|126630772|gb|EBA01386.1| histone deacetylase family protein [Marinobacter sp. ELB17]
Length = 367
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 171/310 (55%), Gaps = 26/310 (8%)
Query: 13 IELKNFSPASV-DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ ++ +PA+ D +A VH +Y+ L S G + T + + + + A
Sbjct: 70 VQFQSGAPAATYDQLARVHITSYLDHL------FSLDGKRVWLDRDTTAVSPDSIKAATA 123
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG IA V+SV + + FAL+RPPGHHA P GFC+ NVA+AA +AQ
Sbjct: 124 AAGNAIAAVESVCKGEAQS----AFALVRPPGHHAEPVRARGFCLLNNVAVAAAHAQAKL 179
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLN 190
G +RV IID+D HHGNGT D F+ DPD+ F TH YPG+G I+EVG G GEG T+N
Sbjct: 180 GCERVLIIDWDAHHGNGTQDIFWADPDVLFFDTHCAAPFYPGSGLIEEVGVGLGEGYTIN 239
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP +GD A VF +++VP A+ FKPDL+LVSAG+D H D ++ T + +L
Sbjct: 240 VPLPETAGDIAFEKVFRDILVPAAEHFKPDLVLVSAGFDPHRND--MAMNLTYDGFKVLT 297
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG------------EPSKASE 298
++ +A C + F LEGGYNL+SL+ V G E +A+E
Sbjct: 298 RIVQDIADTHCEGKLAFVLEGGYNLSSLAKGVHAVLEVLTGGDVPKLWEAGVKEAEEAAE 357
Query: 299 FDNPAILYEE 308
F A EE
Sbjct: 358 FHRSAFSDEE 367
>gi|429191283|ref|YP_007176961.1| deacetylase [Natronobacterium gregoryi SP2]
gi|448323762|ref|ZP_21513215.1| histone deacetylase superfamily protein [Natronobacterium gregoryi
SP2]
gi|429135501|gb|AFZ72512.1| deacetylase, histone deacetylase/acetoin utilization protein
[Natronobacterium gregoryi SP2]
gi|445620898|gb|ELY74385.1| histone deacetylase superfamily protein [Natronobacterium gregoryi
SP2]
Length = 342
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 162/289 (56%), Gaps = 22/289 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL-- 70
+E P +D I++VH R+Y+ +E+ EG G T +E+
Sbjct: 38 VEYVEGDPVGIDVISTVHDRSYLESIEE----------FCAEGGGNWDPDTTAVEETWDA 87
Query: 71 ---AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+A A A+ ++ + R P FA+ RPPGHHA+ MGFC NVA+AA+ A
Sbjct: 88 IRYSAGQACWAVEKALEGATGRKTP---FAIGRPPGHHAVVDDAMGFCFANNVAVAAQQA 144
Query: 128 QRA--HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+ + + RV I+D+DVHHGNGT D FYD D+FF+S H+ G YPGTG + E G GDGE
Sbjct: 145 LESDEYDVDRVAIVDWDVHHGNGTQDIFYDRDDVFFVSVHEQGLYPGTGDLGESGEGDGE 204
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+N+P+P G+ DT V + + + PDL++VSAG+DAH DP++ ++ +T
Sbjct: 205 GATMNVPMPAGTDDTEYLAVIEGPVAAALESYDPDLLIVSAGFDAHRHDPISRIRLSTEA 264
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
Y +L I+ LA D + F LEGGY L L+ SVA F G EP
Sbjct: 265 YALLTDRIRGLA-DRIDAALAFVLEGGYGLELLADSVAIVHETFDGREP 312
>gi|294900057|ref|XP_002776878.1| histone deacetylase hda1, putative [Perkinsus marinus ATCC 50983]
gi|239884079|gb|EER08694.1| histone deacetylase hda1, putative [Perkinsus marinus ATCC 50983]
Length = 1000
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 143/250 (57%), Gaps = 6/250 (2%)
Query: 44 RASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPG 103
R++++ I G+ TY + + A+AG +ALV+ + + D GFA +RPPG
Sbjct: 8 RSTEKNYIFPFGAD-TYVCKESPAAAKASAGCVLALVEEIVDKDSPVDR--GFACVRPPG 64
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA MGFC F NVAIAA+ + +G++RV I+D+DVHHGNGT F +D + +S
Sbjct: 65 HHATCSEAMGFCFFNNVAIAAKALRERYGVERVAIVDWDVHHGNGTCGIFEEDSGVLVIS 124
Query: 164 THQ-DGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPD 220
H+ DG YPG+G E+G GD G TLN+P+ G GD + F ++++P FKP+
Sbjct: 125 VHRFDGGTFYPGSGNWTEMGSGDAVGYTLNVPIDGTYGDEELHFCFDKLVLPALTSFKPE 184
Query: 221 LILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSY 280
ILVS G+DA + DPL + T Y L + + + R LEGGYNL+S++
Sbjct: 185 FILVSCGFDACINDPLGECEVTPACYGRLTRQLIESFPEGSAPRVALVLEGGYNLDSIAA 244
Query: 281 SVADSFRAFL 290
S + RA L
Sbjct: 245 SAEECMRALL 254
>gi|393758565|ref|ZP_10347385.1| histone deacetylase superfamily protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
gi|393163001|gb|EJC63055.1| histone deacetylase superfamily protein [Alcaligenes faecalis
subsp. faecalis NCIB 8687]
Length = 369
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 152/286 (53%), Gaps = 22/286 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA DI VH ++ + M R S G G T + ++ +AG I L
Sbjct: 66 PARDKDILRVHTAEHL----ENMKRVSALPTGGDTGDGITTMGNGGLEIAMLSAGGAIEL 121
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V V + + G+AL+ PPGHHA G MGFC+F N ++AA YA+ GL RV I+
Sbjct: 122 VKKVVSREVSN----GYALVNPPGHHAPRAGAMGFCIFNNTSVAAAYAREELGLDRVAIL 177
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT D +++DP + +S HQ +P +G E G G G G LN+PLP G G
Sbjct: 178 DWDVHHGNGTQDIWWNDPSVLTISLHQHLCFPANSGFTTERGEGGGLGYNLNIPLPPGGG 237
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ A +V++P + +KP LI+V +G+DA ++DPLA + T + +A I A+
Sbjct: 238 NAAYLYAMEKVVLPALRSYKPQLIIVGSGFDASMMDPLARMMVTASGFRQMARQIIDCAE 297
Query: 259 DLCGSRCVFFLEGGYNLNSLSY-------------SVADSFRAFLG 291
++C R F EGGY+ + L + ++AD + FLG
Sbjct: 298 EVCEGRIAFVQEGGYSPHYLPFCGQAVIEELTGVRTLADPYAEFLG 343
>gi|429211097|ref|ZP_19202263.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
gi|428158511|gb|EKX05058.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
Length = 370
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/316 (35%), Positives = 170/316 (53%), Gaps = 15/316 (4%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
S ++L + AS +D+ VH Y+ KAM A + GP T++ +
Sbjct: 59 SAKLKLSSAPLASEEDLLRVHPLDYLQRF-KAMSDAGHGELGEEAMVGPG-----TYEIA 112
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+AG IA VD+V + + +AL RPPGHH + MGFC N+A+A A+
Sbjct: 113 RQSAGLAIAAVDAVLSGELDN----AYALSRPPGHHCLADRGMGFCYLANIAVAVEAAKA 168
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGST 188
HG++RV ++D+DVHHGNGT FY D+ LS HQ +P G+G ++E G G G G+
Sbjct: 169 RHGIRRVAVLDWDVHHGNGTQSIFYGRDDVLSLSIHQADCFPVGSGAVEEQGEGAGLGAN 228
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PL GSGD A R +IVP +RF+P+LI+V+ G+DA+ +DPLA + + T+
Sbjct: 229 VNVPLYPGSGDDAYRHAMERIIVPALERFRPELIVVACGFDANGVDPLARMLAHSETFRA 288
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L ++++ A+ LC R V EGGY + + G ++ + P + ++
Sbjct: 289 LTRSVREAAERLCDGRLVLVHEGGYAEAYVPFCGHAVIEELAGVATEVVDPFLPMLEGQQ 348
Query: 309 PSAKV----KQAIERV 320
P A +QAIER+
Sbjct: 349 PDADFRAFQRQAIERM 364
>gi|345489606|ref|XP_003426178.1| PREDICTED: histone deacetylase 6-like [Nasonia vitripennis]
Length = 1094
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 153/279 (54%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++I H + Y+ ++K + + Y T+ + +AG+ + +V
Sbjct: 544 ASEEEILLAHTQDYLDNIKKTAETKLKDLAKQASSLNSVYLHPETWTSAAISAGSLLQVV 603
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DS+ +++ G A++RPPGHHA GFC+F NVAIAA+YA H LKRV I+D
Sbjct: 604 DSILNGESQS----GVAIVRPPGHHAEEDAACGFCIFNNVAIAAKYAVSCHNLKRVLIVD 659
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNLPL-P 194
+D+HHGNGT +D I ++S H+ +GS+ + VG G GEG +N+P
Sbjct: 660 WDIHHGNGTQSILENDSSILYISLHRYDNGSFFPHSKAANYNVVGTGKGEGFNVNIPWNK 719
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F +V++P A ++ P+L+LVSAG+DA + DPL + + Y + +
Sbjct: 720 RGMGDAEYIAAFQQVVMPIAYQYNPELVLVSAGFDACIADPLGGCKVSPEMYGHMTHWLS 779
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+S+++ +A LG+P
Sbjct: 780 SLA----NGRIILTLEGGYNVNSISHAMTMCTKALLGDP 814
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 80/137 (58%), Gaps = 9/137 (6%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +T+Q SL A G+ I LV+++ + + G A+IRPPGHHA+ G+C F N
Sbjct: 208 YFHPSTYQLSLLATGSTINLVENIC----KENIQNGMAIIRPPGHHAMKAEYCGYCFFNN 263
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKI 176
VAI+A A + + KR+ I+D+DVHHG T FY+DP + + S H ++G +P +
Sbjct: 264 VAISAEVALKNNLAKRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYENGEFWPNLRES 323
Query: 177 D--EVGRGDGEGSTLNL 191
+ +G G GE +N+
Sbjct: 324 NYHYIGDGPGEVGLMNI 340
>gi|206576080|ref|YP_002239856.1| histone deacetylase family protein [Klebsiella pneumoniae 342]
gi|206565138|gb|ACI06914.1| histone deacetylase family protein [Klebsiella pneumoniae 342]
Length = 371
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 27/303 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKTISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V + ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVLEGELDN----AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGY--------------NLNSLSYSVADSFRAFLGEPSKA 296
++Q A LCG + V EGGY L+ + V D R F+ +
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGIRTEVQDPLREFIQQQQPR 350
Query: 297 SEF 299
+EF
Sbjct: 351 AEF 353
>gi|384496447|gb|EIE86938.1| hypothetical protein RO3G_11649 [Rhizopus delemar RA 99-880]
Length = 686
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 141/245 (57%), Gaps = 14/245 (5%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y A++F+ L AAG+ IAL++++ + R FA+IRPPGHHA PMGFC+F N
Sbjct: 396 YLNASSFESGLYAAGSLIALLEALVKDEIRN----AFAIIRPPGHHAEHDSPMGFCLFNN 451
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPG--TG 174
VAIA + + +K+ I+D+D+H GNGT + F ++P++ ++S H+ YP G
Sbjct: 452 VAIAVNHCMKNLAVKKTLIVDWDIHFGNGTQNIFSENPNVLYISLHRYDDKMFYPADRKG 511
Query: 175 KIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
+ G G GEG+T+N+P P GG D F EV++P A F PDL++VSAG+DA +
Sbjct: 512 AAEYTGHGKGEGTTVNIPWPCGGMTDADYFYAFKEVVIPIAMEFDPDLLVVSAGFDAAIG 571
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
DP+ + T Y A++ + K + + LEGGYNLNS++ S LG+
Sbjct: 572 DPIGQCKVTPAGY----AHMTHMLKSINNGKLAIALEGGYNLNSIALSALGCMNVLLGDS 627
Query: 294 SKASE 298
A E
Sbjct: 628 PPAIE 632
>gi|347735968|ref|ZP_08868723.1| histone deacetylase superfamily [Azospirillum amazonense Y2]
gi|346920672|gb|EGY01683.1| histone deacetylase superfamily [Azospirillum amazonense Y2]
Length = 309
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 153/273 (56%), Gaps = 12/273 (4%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
+ ++ + A++D I VH V+ L+ ++ GI+ ++G T + +F+ +L
Sbjct: 40 QYLDRRQAPRATLDQIERVHTPDLVTRLQASI---PITGIVSLDGD--TVLSPGSFEAAL 94
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAGA A VD+V A + R F IRPPGHHA P MGFC+F NV I A +A+ A
Sbjct: 95 HAAGAVCAAVDAVMAGEVRN----AFCAIRPPGHHAEPGQSMGFCLFNNVGIGAEHARFA 150
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
HGL+RV I+DFDVHHGNG+ DPD+F+ STH+ YPGTG + + RGD G+ +N
Sbjct: 151 HGLRRVAIVDFDVHHGNGSQTLAEHDPDLFYGSTHEWPLYPGTGALGD--RGD-YGTVVN 207
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+ L GS R ++P F P+LI +SAG+DAH DPLA L +
Sbjct: 208 VLLRAGSTGAEFRAGMTSRLLPALDAFAPELIFISAGFDAHRADPLADLALVEDDFAWAT 267
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A I +A C R V LEGGY+ +L+ VA
Sbjct: 268 AEIAAIADRHCRGRLVSSLEGGYDPAALASCVA 300
>gi|417859096|ref|ZP_12504153.1| deacetylase [Agrobacterium tumefaciens F2]
gi|338825100|gb|EGP59067.1| deacetylase [Agrobacterium tumefaciens F2]
Length = 311
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 146/275 (53%), Gaps = 14/275 (5%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E +E K A+ D + H ++ + + + + I IE TYA+ + Q +L
Sbjct: 40 ERLERKQAPQANEDAVLLAHPEEHLLAVMRQIPEEDGE-INRIEAD--TYASPKSLQAAL 96
Query: 71 AAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
GA +A VD V A+ N F RPPGHHA MGFC+F N AIAAR+AQ
Sbjct: 97 TGIGAAMAAVDDVFTGAADNV------FVAARPPGHHAETAKAMGFCLFNNAAIAARHAQ 150
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+ HG +RV IID+DVHHGNGT D F++D + F STHQ YP +G +E G + +
Sbjct: 151 KVHGAERVAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDKNETGV---KNNV 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N PL +G R F ++P F PDLI++SAG+DAH DPLA + +
Sbjct: 208 VNAPLSPNTGSEYFREAFKSRVLPAIADFSPDLIIISAGFDAHHRDPLAQINLVGEDFDW 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
+ ++A +R V LEGGY+L L+ S A
Sbjct: 268 ATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAA 302
>gi|73748181|ref|YP_307420.1| histone deacetylase [Dehalococcoides sp. CBDB1]
gi|289432231|ref|YP_003462104.1| histone deacetylase [Dehalococcoides sp. GT]
gi|452203183|ref|YP_007483316.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
DCMB5]
gi|452204627|ref|YP_007484756.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
BTF08]
gi|73659897|emb|CAI82504.1| histone deacetylase family protein [Dehalococcoides sp. CBDB1]
gi|288945951|gb|ADC73648.1| Histone deacetylase [Dehalococcoides sp. GT]
gi|452110242|gb|AGG05974.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
DCMB5]
gi|452111683|gb|AGG07414.1| histone deacetylase superfamily protein [Dehalococcoides mccartyi
BTF08]
Length = 341
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 147/272 (54%), Gaps = 21/272 (7%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAGAGIALV 80
++ S H R+Y+S +E+ + G G T + +++ +L A G I V
Sbjct: 54 ELESFHKRSYISRVEE----------VGFSGGGWLDQDTVISLDSYEAALYAVGGVIEGV 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + F L RPPGHHA+P+ MGFCVF NVA+ A +A H LKRV ++D
Sbjct: 104 DKVLSRELDS----AFVLCRPPGHHALPEASMGFCVFNNVALGALHALNKHKLKRVAVVD 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG +DP + +LS HQ +P TG E G + LN+PLP G GD+
Sbjct: 160 FDVHHGNGIQHVCLNDPRLIYLSLHQIHHFPFTGDSRENGPFQ---NILNIPLPAGCGDS 216
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ F EVI P ++F P+LILV AGYDAH D + + + + + IK A+++
Sbjct: 217 HYQKAFDEVIGPYLRKFAPELILVCAGYDAHFADDMGEMCLSQQGFAGITRAIKHAAEEV 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
CG + VF LEGGY+ L+ V + L E
Sbjct: 277 CGGKLVFSLEGGYHYLGLAEGVGATLAVLLNE 308
>gi|317144802|ref|XP_001820384.2| histone deacetylase hda1 [Aspergillus oryzae RIB40]
gi|391874670|gb|EIT83515.1| histone deacetylase complex, catalytic component HDA1 [Aspergillus
oryzae 3.042]
Length = 792
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 166/327 (50%), Gaps = 28/327 (8%)
Query: 8 RGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
R + I ++N A+ ++I+ VH + + +E D + I L Y TF
Sbjct: 182 RPMKRISVRN---ATEEEISLVHTPDHFAFVESTKDMTDDELIALEHTRDSIYFNKLTFA 238
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
SL + G I +VA K + A+IRPPGHHA MGFC+F NV++AAR
Sbjct: 239 SSLLSVGGAIETCLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVC 294
Query: 128 QRAHG--LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVG 180
Q+ G +++ I+D+DVHHGNG AFYDDP++ ++S H QDG YPG G D G
Sbjct: 295 QKQLGDKCRKILILDWDVHHGNGIQKAFYDDPNVLYISLHVYQDGKFYPGGDEGDWDHCG 354
Query: 181 RGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G G G +N+P P G GD F +V++P AQ F PDL++V++G+DA V D L
Sbjct: 355 TGAGYGRNVNIPWPSQGMGDGDYMYAFQQVVMPIAQEFDPDLVIVASGFDAAVGDELGGC 414
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
F T T Y A++ + L + LEGGYN S+S S + +G+P
Sbjct: 415 -FVTPTCY---AHMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDP------ 464
Query: 300 DNPAILYEE-PSAKVKQAIERVKHIHS 325
P L+ PS + RV I S
Sbjct: 465 --PDRLHSTFPSKLATTTVRRVMMIQS 489
>gi|307595004|ref|YP_003901321.1| histone deacetylase [Vulcanisaeta distributa DSM 14429]
gi|307550205|gb|ADN50270.1| Histone deacetylase [Vulcanisaeta distributa DSM 14429]
Length = 348
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 150/262 (57%), Gaps = 21/262 (8%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I VH YV + +D+A G + I+ TY + T + + A GA + +D V
Sbjct: 50 ILKVHDPDYV----RQIDKACGMGYVFIDAD--TYVSPGTCKAARLAVGAVLRGIDKVLG 103
Query: 86 SKNRPDPPLGFALIRPPGHH------AIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+ +A++RPPGHH A+ GFCVF NVAI A YA + HG+ +V I+
Sbjct: 104 GEWNA----AYAVVRPPGHHVGRGGRALMAPTQGFCVFNNVAIGAVYALK-HGISKVAIL 158
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
D D HHGNGT + FY+DP + ++S HQD YPGTG ID+VG G+GEG +N+PLP +
Sbjct: 159 DVDAHHGNGTQEIFYEDPRVLYVSLHQDPLTIYPGTGFIDDVGEGEGEGFNVNVPLPPFT 218
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
D A +V+ P + F+P LILVS G+DAH+LD +A+L+ + Y + ++ +
Sbjct: 219 ADDAYMKALDKVVWPIIEEFRPQLILVSLGFDAHMLDNIANLRLSLNAYAYVFRRLRDMI 278
Query: 258 KDLCGSRCVFFLEGGYNLNSLS 279
+ G VF LEGGYN + LS
Sbjct: 279 GRVKG--VVFVLEGGYNGDVLS 298
>gi|17540334|ref|NP_500788.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
gi|351063051|emb|CCD71098.1| Protein HDA-6, isoform a [Caenorhabditis elegans]
Length = 863
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 20/232 (8%)
Query: 60 YATATTFQESLAAAGAGIALVDSV----AASKNRPDPPLGFALIRPPGHHAIPKGPMGFC 115
Y T T + + A GA + VD + A +N ++RPPGHHA GFC
Sbjct: 518 YLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN------ALVIVRPPGHHASASKSSGFC 571
Query: 116 VFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGT 173
+F NVA+AA+YAQR H KRV I+D+DVHHGNGT + FY+D ++ ++S H+ G++
Sbjct: 572 IFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPI 631
Query: 174 GK---IDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
G+ +VG G GEG ++N+P G GD + F VI+P A +F PDL+L+SAG+D
Sbjct: 632 GEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFD 691
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A V DPL + T T+ ++ + LA G R + LEGGYNL S+S S
Sbjct: 692 AAVDDPLGEYKVTPETFALMTYQLSSLA----GGRIITVLEGGYNLTSISNS 739
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 19/301 (6%)
Query: 1 MELTSEFRGSEIIE----LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS 56
+++ ++I+E L NF D+ H ++ V L ++ + + I
Sbjct: 42 LKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED----INSQ 97
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
Y + + S+ A G+A V + + GFA++RPPGHHA P GFC+
Sbjct: 98 CEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCL 157
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPG- 172
F NVA AA A + G +R+ I+D DVHHG+GT FYDD + + S H+ +P
Sbjct: 158 FNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHL 216
Query: 173 -TGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
D +G G G G NL L G D+ ++ V++P A +F P +++SAG+DA
Sbjct: 217 PESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDA 276
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ DPL + T Y + ++K LA+ R + LEGGYN + +V R L
Sbjct: 277 LLGDPLGGMCLTPDGYSHILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Query: 291 G 291
G
Sbjct: 333 G 333
>gi|340355936|ref|ZP_08678604.1| histone deacetylase [Sporosarcina newyorkensis 2681]
gi|339621864|gb|EGQ26403.1| histone deacetylase [Sporosarcina newyorkensis 2681]
Length = 377
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 155/265 (58%), Gaps = 15/265 (5%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEK-AMDRASQQGIILIEGSGPTYATATTFQESL 70
+LK+ +P A+ DDI H +YV +++ + G I I G G +++ +L
Sbjct: 57 QLKSIAPRSATRDDIELFHLPSYVDKVKQLSAANGGDAGQIAIVGRG-------SYEIAL 109
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
+AG + VD+V D +AL RPPGHHA + MGFC+F NVAIAA++A++
Sbjct: 110 LSAGGAMTAVDAVMDG----DVQNVYALTRPPGHHAEAQEGMGFCLFNNVAIAAKHAKKK 165
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT-GKIDEVGRGDGEGSTL 189
+ L+R+ ++D+DVHHGNGT AFYDD F+S HQD +P G I+ G+G GEG +
Sbjct: 166 YNLERILVLDWDVHHGNGTEQAFYDDESTLFISIHQDRLFPAERGYIEHCGQGKGEGYNV 225
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP G+G+ F +++ P +FK +LI+VSAG D DPLA + T +Y
Sbjct: 226 NIPLPAGTGNAGYMHAFEKIVGPIVDQFKSELIIVSAGQDPSFFDPLARMMVTANGFYRF 285
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYN 274
A +K+LA+ C R V EGGY+
Sbjct: 286 AEFMKKLAEKHCDGRLVLCHEGGYS 310
>gi|126667705|ref|ZP_01738673.1| deacetylase / probable acetylpolyamine aminohydrolase [Marinobacter
sp. ELB17]
gi|126627808|gb|EAZ98437.1| deacetylase / probable acetylpolyamine aminohydrolase [Marinobacter
sp. ELB17]
Length = 376
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/256 (39%), Positives = 139/256 (54%), Gaps = 11/256 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ +D+ H Y+ LEK + G TA + + +AG IA
Sbjct: 74 PATREDLEYFHTGRYLDELEKGDLQGGGDGGDCAP------YTAGSLAAAKQSAGLAIAA 127
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V+ VA R +AL RPPGHHA GFC+ GN+ +A + A+ + RV ++
Sbjct: 128 VEDVALGIRR----RAYALCRPPGHHAESDRGRGFCLLGNIPVAIKRARALGQIGRVAVL 183
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT AFYDDPD+F LS HQ G+YP TG +E G G G G LN P+P G G
Sbjct: 184 DWDVHHGNGTQSAFYDDPDVFTLSIHQAGNYPLDTGAFEEQGEGAGLGCNLNAPMPPGCG 243
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
A R +I+P F+P+LI+V+ GYDA DPL + +G + + I++LA+
Sbjct: 244 IGAYRYAMSHLILPALTDFRPELIVVACGYDACAKDPLGKMLLNSGAFSEMTEQIRKLAE 303
Query: 259 DLCGSRCVFFLEGGYN 274
+C R V EGGY+
Sbjct: 304 QVCDGRLVMVHEGGYS 319
>gi|297569082|ref|YP_003690426.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
gi|296924997|gb|ADH85807.1| Histone deacetylase [Desulfurivibrio alkaliphilus AHT2]
Length = 332
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 153/276 (55%), Gaps = 11/276 (3%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ ++ ++H Y+ LE+A +++G + + +Y T + A A I
Sbjct: 60 PAARRELTAIHTEEYLLRLEEAA--LAERGYLDHPDNRLSYDTYRVALLAAGAGLAAIDR 117
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+++ A+ ALIRPPGHHA P+GFC N A+AARY Q+ H K++ II
Sbjct: 118 LEAANATAA-------GALIRPPGHHAERSTPLGFCFLNNAAVAARYWQQRHDRKKIMII 170
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
D+D HHGNG AF DDP++F+LS H+ S+PGTG +E G+G G G+TLNLPLP GS
Sbjct: 171 DWDAHHGNGIQAAFEDDPEVFYLSIHEHPTWSFPGTGWSEERGQGAGRGTTLNLPLPPGS 230
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
GD + + EVI P Q F P+ ++++AG+D H D ++ L +++ Y L + A
Sbjct: 231 GDDLVLRLLDEVIDPALQSFAPEALIIAAGFDGHHHDDMSGLSYSSELYRRLGRHAAASA 290
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
C R +F LEGGY + L + + L P
Sbjct: 291 ARHCPGRLLFLLEGGYQPDLLVRCLGNFLEGLLAVP 326
>gi|424775508|ref|ZP_18202501.1| histone deacetylase superfamily protein [Alcaligenes sp. HPC1271]
gi|422889218|gb|EKU31598.1| histone deacetylase superfamily protein [Alcaligenes sp. HPC1271]
Length = 369
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/286 (36%), Positives = 153/286 (53%), Gaps = 22/286 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA DI VH ++ + M R S G G T + ++ +AG I +
Sbjct: 66 PARDKDILRVHTAEHL----ENMKRVSALPTGGDTGDGITTMGNGGLEIAMLSAGGAIEM 121
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V V + + G+AL+ PPGHHA G MGFC+F N ++AA YA+ GL RV I+
Sbjct: 122 VKKVVSREVSN----GYALVNPPGHHAPRAGAMGFCIFNNTSVAAAYAREELGLDRVAIL 177
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGSG 198
D+DVHHGNGT D +++DP + +S HQ +P +G E G G+G G LN+PLP G G
Sbjct: 178 DWDVHHGNGTQDIWWNDPSVLTISLHQHLCFPANSGFTTERGEGEGLGYNLNIPLPPGGG 237
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ A +V++P + +KP LI+V +G+DA ++DPLA + T + +A I A+
Sbjct: 238 NAAYLYAMEKVVLPALRAYKPQLIIVGSGFDASMMDPLARMMVTASGFRQMARQIIDCAE 297
Query: 259 DLCGSRCVFFLEGGYNLNSLSY-------------SVADSFRAFLG 291
++C R F EGGY+ + L + ++AD + FLG
Sbjct: 298 EVCEGRIAFVQEGGYSPHYLPFCGQAVIEELTGVRTLADPYADFLG 343
>gi|448347287|ref|ZP_21536163.1| histone deacetylase superfamily protein [Natrinema altunense JCM
12890]
gi|445631037|gb|ELY84284.1| histone deacetylase superfamily protein [Natrinema altunense JCM
12890]
Length = 343
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 120/318 (37%), Positives = 169/318 (53%), Gaps = 23/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ A
Sbjct: 38 VEYVEADPCDLDRMAAVHERDYLESVRE----------FCADGGGSWDPDTTAVEETWEA 87
Query: 73 --AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
AG+A + AA + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 IRRSAGLACWAAEAALEGATGRDTPFSIGRPPGHHAVSDNAMGFCFVDNVAVAAQHALDH 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + RV IID+DVHHGNGT D FYD D+FF+S H+ G YPGTG IDE G G+GEG+T
Sbjct: 148 DAYDVDRVAIIDWDVHHGNGTQDIFYDRGDVFFVSLHEQGLYPGTGDIDETGTGEGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNVPMPAGTDDRDYLAALEGPITAALTDFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L+ ++ LA + F LEGGY L+ L+ SVA F G P +E
Sbjct: 268 LSDRVRSLAA-DTDAALAFVLEGGYGLDVLADSVALVHETFDGR--------EPIEPEDE 318
Query: 309 PSAKVKQAIERVKHIHSL 326
P K + A+E V H L
Sbjct: 319 PGDKAESALEDVIDAHDL 336
>gi|53803335|ref|YP_114898.1| histone deacetylase/AcuC/AphA family protein [Methylococcus
capsulatus str. Bath]
gi|53757096|gb|AAU91387.1| histone deacetylase/AcuC/AphA family protein [Methylococcus
capsulatus str. Bath]
Length = 310
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 153/285 (53%), Gaps = 16/285 (5%)
Query: 6 EFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
EFR +E A + + VH+R ++ E+ Q G ++ T + +
Sbjct: 38 EFRSLRRLEAPR---ADISRLELVHSRRHI---ERVFASLPQTGHHFVDAD--TVVSPES 89
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
+ +L A GA VD V + R F +RPPGHHA P MGFC+F N+AIAA
Sbjct: 90 GEAALHAVGAVCLAVDEVIGKRARN----AFCAVRPPGHHAEPDAAMGFCLFNNIAIAAA 145
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
+A HGL+R+ I+DFDVHHGNGT AF +P + ++STHQ YPGTG +E G G+
Sbjct: 146 HALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVSTHQYPWYPGTGSAEETGVGN-- 203
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
+N+PLP G+ A R +P RF+P+L+L+SAG+DAH DPLA L T
Sbjct: 204 --LVNIPLPAGTDSAAYREAVTATALPAIDRFRPELVLISAGFDAHRDDPLADLALTEDD 261
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Y + A + +LA G R V LEGGY L +L S A R L
Sbjct: 262 YGWITAELMKLADRHSGGRIVSALEGGYALEALGRSAAAHLRTLL 306
>gi|448336091|ref|ZP_21525202.1| histone deacetylase superfamily protein [Natrinema pallidum DSM
3751]
gi|445630449|gb|ELY83714.1| histone deacetylase superfamily protein [Natrinema pallidum DSM
3751]
Length = 343
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 119/318 (37%), Positives = 170/318 (53%), Gaps = 23/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P +D +A+VH R Y+ + + +G G T +E+ A
Sbjct: 38 VEYVEADPCDLDRMAAVHERDYLESVRE----------FCADGGGSWDPDTTAVEETWEA 87
Query: 73 --AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA--Q 128
AG+A + AA + F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 IRRSAGLACWAAEAALEGATGRDTPFSIGRPPGHHAVSDNAMGFCFVDNVAVAAQHALDH 147
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
A+ + RV IID+DVHHGNGT D FYD D+FF+S H+ G YPGTG +DE G G+GEG+T
Sbjct: 148 DAYDVDRVAIIDWDVHHGNGTQDIFYDRGDVFFVSLHEQGLYPGTGDVDETGTGEGEGTT 207
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+P+P G+ D I F PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 208 MNIPMPAGTDDRDYLAALEGPITAALTDFDPDLLLISAGFDAHRHDPISRIRLSTEAYAL 267
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L+ ++ LA + F LEGGY L+ L+ SVA F G A + +E
Sbjct: 268 LSDRVRSLAA-DTDAALAFVLEGGYGLDVLADSVALVHETFDGREPIAPD--------DE 318
Query: 309 PSAKVKQAIERVKHIHSL 326
P K + A+E V H L
Sbjct: 319 PGDKAESALEDVIDAHDL 336
>gi|350562362|ref|ZP_08931197.1| histone deacetylase superfamily [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349779595|gb|EGZ33938.1| histone deacetylase superfamily [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 309
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 141/269 (52%), Gaps = 13/269 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH+ Y+ L A+ + + G TY + + AAGA + V
Sbjct: 51 ATREQLLRVHSAEYLDALAGAVPGPGEWTTL---DGGDTYFGEHSLDAAHRAAGAVVLAV 107
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A+ F +RPPGHHA MGFCVF NVA+ A +A HGL RV I+D
Sbjct: 108 DLVLANSTH----TAFCSVRPPGHHAGADYGMGFCVFNNVAVGAAHAMEGHGLSRVAIVD 163
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F D+P + F S+ Q YP G D V LNLPLP G+
Sbjct: 164 FDVHHGNGTEDIFRDEPRVLFCSSFQHPFYPHRGA-DTV-----SDHILNLPLPAGTDGA 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A+R + +P F+P+LILVSAG+D H+ D +AS + Y L + LAK
Sbjct: 218 ALRAAVEQHWLPALDAFRPELILVSAGFDGHLEDDMASFRLVESDYAWLTGALYDLAKRH 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
C R V LEGGYNL++LS SVA +
Sbjct: 278 CDGRLVSVLEGGYNLSALSRSVAAHLKVL 306
>gi|410965882|ref|XP_003989468.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 10 [Felis
catus]
Length = 733
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 152/282 (53%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YVS L ++++ L Y +TF + A GA + LV
Sbjct: 55 ASEAELGLVHSPEYVSLLRGTQTLSTRELQALSGQYDAVYFHPSTFHCARLAVGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH GFCVF NVAIAA+YA+R HGL R+ I
Sbjct: 115 DAVLTGAVHN------GLALVRPPGHHGQRAAANGFCVFNNVAIAAKYAKRRHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ Y D VG+G G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPYLRESDADAVGQGQGRGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+L+SAG+D+ + DP ++ T + ++
Sbjct: 229 NQVGMGNADYVAAFLHVLLPVAFEFDPELVLISAGFDSAIGDPEGQMRATPECF----SH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SLS SV +A LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVKALLGDPA 326
>gi|355785104|gb|EHH65955.1| hypothetical protein EGM_02833 [Macaca fascicularis]
Length = 671
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + K ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASKEELGLVHSPEYVSLVRKTQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ I
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQSAAANGFCVFNNVAIAAAHAKQKHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYAAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ L + L G R LEGGY+L SL+ SV + +A LG+P+
Sbjct: 285 LTHLLQVLAGGRVCAMLEGGYHLESLAESVCMTVQALLGDPA 326
>gi|380012501|ref|XP_003690319.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6-like [Apis
florea]
Length = 1179
Score = 181 bits (460), Expect = 3e-43, Method: Composition-based stats.
Identities = 100/279 (35%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH + Y+ ++ + S++ E Y T+ + + G+ + ++
Sbjct: 601 ATKEELLLVHTKEYIDKIKNTKNLKSKELKKQAETYNSVYLHPETWSSACISTGSLLQVI 660
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV +++ G A+IRPPGHHA GFC+F NVAIAA+YA H +KRV I+D
Sbjct: 661 DSVLNGESQS----GIAIIRPPGHHATEDAACGFCIFNNVAIAAKYAIEFHHVKRVLIVD 716
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPL-P 194
+DVH+GNGT F +D + ++S H+ +GS +P + + + VG GEG T+N+P
Sbjct: 717 WDVHYGNGTQSIFEEDSKVLYISVHRYDNGSFFPNSKRANYSYVGSESGEGFTVNIPWNK 776
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A +F P+LIL+SAG+DA + DPL T Y L +
Sbjct: 777 KGMGDAEYIAAFQQIIMPIAYQFNPELILISAGFDACIGDPLGGCFVTPELYGHLTHWLS 836
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN NS+++++A ++ LG+P
Sbjct: 837 SLAN----GRVILSLEGGYNTNSVAHAMAICTKSLLGDP 871
Score = 137 bits (346), Expect = 6e-30, Method: Composition-based stats.
Identities = 91/255 (35%), Positives = 128/255 (50%), Gaps = 25/255 (9%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +T++ SL A G+ I LV+S+ + + G A+IRPPGHHA+ G+C F N
Sbjct: 194 YIHPSTYRLSLLAVGSTINLVESICKGEIQN----GMAIIRPPGHHAMKSEYCGYCFFNN 249
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TG 174
VAIAA + ++ I+D+DVHHG T FYD+P + + S H ++G + P
Sbjct: 250 VAIAAEKVLCNNLASKILIVDWDVHHGQATQQMFYDNPQVIYFSIHRYENGEFWPNLRES 309
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
VG GEG N+PL G + +F +V++P A F+PDLI+VSAGYDA +
Sbjct: 310 NFHFVGDDLGEGYNFNVPLNKIGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 369
Query: 234 DP-LASLQFTTGTYYMLAANIK--QLAKDLCGS------------RCVFFLEGGYNLNSL 278
P S + +L N K L C + + LEGGY L SL
Sbjct: 370 CPEFNSNLIIIXGFNLLIENEKGEMLITPACYAHLLSSLLCLASGKVAVILEGGYCLKSL 429
Query: 279 SYSVADSFRAFLGEP 293
S S A + R L +P
Sbjct: 430 SESAALTLRTLLNDP 444
>gi|451946585|ref|YP_007467180.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
gi|451905933|gb|AGF77527.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfocapsa sulfexigens DSM 10523]
Length = 342
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 136/247 (55%), Gaps = 9/247 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TY + + AAG AL + + D GF LIRPPGHHA P MGFC+F
Sbjct: 85 TYLMEESLPTARLAAGGCFALANRIMEG----DIDYGFGLIRPPGHHATPGRGMGFCIFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
NVA+ A Y + +GL+R+ I+DFDVHH NGT + FY+ ++ S HQ G +P TG+ +E
Sbjct: 141 NVALTAEYLRNTYGLRRILILDFDVHHANGTQEIFYETDEVMVCSIHQKGIFPFTGEREE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
VG GEG T+N+P+ GD+ + + +++ P ILVSAG+D+H D ++
Sbjct: 201 VGSRLGEGFTINMPVHAQFGDSEYTYILGRTLQGLVEQYLPQFILVSAGFDSHKDDNISG 260
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
+T + + +++ A D C +R +F LEGGYN SL S+ + A L +
Sbjct: 261 TNLSTQWFATITHILRRHAADSCDNRLLFILEGGYNPVSLEESIFATIDALL-----QNN 315
Query: 299 FDNPAIL 305
FD P L
Sbjct: 316 FDRPGFL 322
>gi|326669858|ref|XP_693858.4| PREDICTED: histone deacetylase 6 [Danio rerio]
Length = 1081
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 154/278 (55%), Gaps = 18/278 (6%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D++ VH + YV ++ + ++ L E Y F + + G+ + LVD V
Sbjct: 116 DELLLVHTKEYVELMKSTQNMTEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKV 175
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
S+ R GF++ RPPGHHA GFC+F N+AIAARYAQ+ H ++RV I+D+DV
Sbjct: 176 MTSQLRN----GFSINRPPGHHAQADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDV 231
Query: 144 HHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKID--EVGRGDGEGSTLNLPLPG--- 195
HHG G F +DP + + S H +DGS +P + D VG G G+G +NLP
Sbjct: 232 HHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGM 291
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
SGD T F ++++P A F+P L+LV+AG+DA + DP +Q + + +L +K
Sbjct: 292 ESGDYI--TAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKG 349
Query: 256 LAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+A+ R V LEGGYNL S + V S R+ LG+P
Sbjct: 350 VAQ----GRLVLALEGGYNLQSTAEGVCASMRSLLGDP 383
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 145/279 (51%), Gaps = 15/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++A H+ ++S ++ + + L + + + ++ +L AAG+
Sbjct: 494 ATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSA 553
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR-AHGLKRVFII 139
++ + R A++RPPGHHA GFC F A+ ARYAQ RV I+
Sbjct: 554 QAILTGQVRN----AVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIV 609
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGT--GKIDEVGRGDGEGSTLNLPLP 194
D+DVHHGNGT F +D + ++S H +DG++ P + D+VG G G G +N+P
Sbjct: 610 DWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWN 669
Query: 195 GGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
GG GD FH +++P A+ F P+L+LVSAG+DA DPL Q T Y L +
Sbjct: 670 GGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQL 729
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
LA R + LEGGYNL S+S S++ LG+
Sbjct: 730 MSLA----AGRVLIILEGGYNLTSISESMSMCTSMLLGD 764
>gi|374333861|ref|YP_005090548.1| histone deacetylase superfamily protein [Oceanimonas sp. GK1]
gi|372983548|gb|AEX99797.1| histone deacetylase superfamily protein [Oceanimonas sp. GK1]
Length = 368
Score = 181 bits (460), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 138/259 (53%), Gaps = 11/259 (4%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
N +PA+ +D+ H Y+ L S+QG G YA +A AG
Sbjct: 62 NAAPAAREDLLRFHTERYIDELSVM----SEQGF----GDAGQYAPFRQDAFPIACRSAG 113
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
+A+ A D G+ L RPPGHHA MGFC+ GN+ IA R AQ ++RV
Sbjct: 114 LAMATVAAVLNGEVDN--GYCLSRPPGHHAEADRGMGFCLLGNIPIAIRAAQAQGLVRRV 171
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPG 195
+ID+DVHHGNGT AFY+D ++ LS H D +YP G+G +E G G G G LN+PLP
Sbjct: 172 AVIDWDVHHGNGTQQAFYEDAEVLTLSLHHDNNYPVGSGSAEERGSGAGFGYNLNVPLPA 231
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
GSG ++++P RFKP+LI+V+ G+DA +DPL + + L AN+
Sbjct: 232 GSGIGTYLAAMDQLVIPALDRFKPELIVVACGFDASAMDPLGCMLLNADAFGQLTANVMA 291
Query: 256 LAKDLCGSRCVFFLEGGYN 274
A LC R V EGGY+
Sbjct: 292 AADRLCRGRLVMVHEGGYS 310
>gi|398829539|ref|ZP_10587736.1| deacetylase, histone deacetylase/acetoin utilization protein
[Phyllobacterium sp. YR531]
gi|398216466|gb|EJN03012.1| deacetylase, histone deacetylase/acetoin utilization protein
[Phyllobacterium sp. YR531]
Length = 308
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 138/255 (54%), Gaps = 10/255 (3%)
Query: 36 SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLG 95
S LE+ + G+ ++ T + ++Q +L A GA A VD V K
Sbjct: 62 SYLERVRATIPEAGLTRVDSD--TTVSPKSWQAALTAIGAANAAVDDVFTGKADS----V 115
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F RPPGHHA MGFC+F N AIAAR+AQ+ HG++RV I+D+DVHHGNGT D F++
Sbjct: 116 FVASRPPGHHAERDKAMGFCLFNNAAIAARHAQKLHGVERVAIVDWDVHHGNGTQDIFWE 175
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + + STHQ YPG+G E G G+ +N PL +G R F+ I+P
Sbjct: 176 DPSVLYCSTHQMPLYPGSGAKSET----GAGNIVNAPLDPDTGSDHFREAFNTRILPSLD 231
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P+LI++SAG+DAH DPLA + + + + A +R V LEGGY+L
Sbjct: 232 AFQPELIIISAGFDAHHRDPLAEINLNEDDFDWATGKLMERAGSYASNRLVSLLEGGYDL 291
Query: 276 NSLSYSVADSFRAFL 290
+S S + +
Sbjct: 292 KGMSLSAGAHIKRLM 306
>gi|429215069|ref|ZP_19206231.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
gi|428154296|gb|EKX00847.1| putative acetylpolyamine aminohydrolase [Pseudomonas sp. M1]
Length = 370
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/301 (34%), Positives = 160/301 (53%), Gaps = 25/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LDLRSAEPASEQDLLRVHPEHYLQRF-KALSDAGGGELGDHAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG +A VD V R + ++L RPPGHH + MGFC+ N+ IA A+ HG
Sbjct: 116 AGLAMAAVDCVL----RSEADNAYSLSRPPGHHCLADQAMGFCMLANIPIAIEAARARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT + + D+ +S HQ+ +P G G + GRG G G+ LN+
Sbjct: 172 IERVAVVDWDVHHGNGTQAIYEERGDVLSVSLHQENCFPPGYGGAADRGRGAGLGANLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP GSG A E+++P +RF+P LI+V+ GYDA+ +DPLA + +G++ + A
Sbjct: 232 PLPAGSGHDAYLQALDEIVLPALRRFRPQLIIVACGYDANAVDPLARMLLHSGSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGY--------------NLNSLSYSVADSFRAFLGEPSKAS 297
+++ A+ LC R V EGGY L+ + +V D FLG S
Sbjct: 292 RLREAAEQLCDGRLVLVHEGGYAEAYVPFCGLAVLEELSGIRTAVEDPLLEFLGLQQPGS 351
Query: 298 E 298
E
Sbjct: 352 E 352
>gi|380791967|gb|AFE67859.1| histone deacetylase 10 isoform 1, partial [Macaca mulatta]
Length = 335
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + K ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASKEELGLVHSPEYVSLVRKTQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ I
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ L + L G R LEGGY+L SL+ SV + +A LG+P+
Sbjct: 285 LTHLLQVLAGGRVCAMLEGGYHLESLAESVCMTVQALLGDPA 326
>gi|367016591|ref|XP_003682794.1| hypothetical protein TDEL_0G02160 [Torulaspora delbrueckii]
gi|359750457|emb|CCE93583.1| hypothetical protein TDEL_0G02160 [Torulaspora delbrueckii]
Length = 714
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 169/313 (53%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH++ + +E++ ++ + E Y ++ + + G I
Sbjct: 134 ATDEEILEVHSKENLEFVERSSRMKREELLKETEKGDSVYFNNDSYVSAKLSCGGVIDAC 193
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR--YAQRAHGLKRVFI 138
+V + + A++RPPGHHA P+ P GFC+F NVA+AA+ Q ++R+ I
Sbjct: 194 KAVVEGRVKN----ALAVVRPPGHHAEPEAPGGFCLFSNVAVAAQNILKQYPESVRRILI 249
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+DP + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 250 LDWDIHHGNGTQKAFYNDPRVLYISLHRFEMGKYYPGTINGRYDQTGEGKGEGFNCNITW 309
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F ++++P A+ F+PDL+++S+G+DA D + T Y +
Sbjct: 310 PVGGVGDAEYMLAFEQIVMPMAREFQPDLVIISSGFDAADGDTIGQCHVTPSCYGQMTHM 369
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P ++P +
Sbjct: 370 LKSLAR---GNLCV-ALEGGYNLDAIAISALSVAKVLIGEP--PDELPDPT---KDPKLE 420
Query: 313 VKQAIERVKHIHS 325
+ I+ V H S
Sbjct: 421 AIEMIDTVIHTQS 433
>gi|327273189|ref|XP_003221363.1| PREDICTED: histone deacetylase 10-like [Anolis carolinensis]
Length = 594
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 164/298 (55%), Gaps = 19/298 (6%)
Query: 6 EFRGSEIIELKNFSP---ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYA 61
+ +G +IE P A+ D+I VH+ Y+ + K+ ++ Q+ + I Y
Sbjct: 39 QLQGYNLIERCTSVPVREATEDEIMLVHSSDYLE-IVKSTEKMKQEELRKISADFDAVYF 97
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
TT+ + AAGA + LVD+V + R G AL+RPPGHH+ GFC+F NVA
Sbjct: 98 HPTTYLCAKLAAGATLELVDAVMLGRTRN----GMALVRPPGHHSQRNAANGFCIFNNVA 153
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGK--I 176
IAA+YAQ+ +GL+R+ I+D+DVHHG G F +DP + + S H+ +P +
Sbjct: 154 IAAKYAQKKYGLERILIVDWDVHHGQGIQYIFDEDPSVLYFSWHRFEHQQFWPSLKESDY 213
Query: 177 DEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
D VG+G G+G +N+P G G+ VF V++P F P+L+LVSAG+D+ + DP
Sbjct: 214 DAVGQGKGKGFNINVPWNKVGMGNADYVAVFLHVLLPLVFEFDPELVLVSAGFDSGIGDP 273
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ T + L + LAK G C+ LEGGY+L SLS SV + + LG+P
Sbjct: 274 EGQMCATPECFAHLTHFLMHLAK---GKLCL-VLEGGYHLRSLSESVCMTIKTLLGDP 327
>gi|13476210|ref|NP_107780.1| histone deacetylase [Mesorhizobium loti MAFF303099]
gi|14026970|dbj|BAB53566.1| mlr7469 [Mesorhizobium loti MAFF303099]
Length = 308
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/188 (47%), Positives = 111/188 (59%), Gaps = 4/188 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F RPPGHHA MGFC F AIAARYAQ HG +RV ++D+DVHHGNGT D F+D
Sbjct: 116 FVAARPPGHHAEKTTAMGFCFFNTAAIAARYAQNKHGAERVAVVDWDVHHGNGTQDIFWD 175
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + + STHQ YPGTG E G G+ +N PL +G R F ++P
Sbjct: 176 DPSVLYCSTHQMPLYPGTGAKTET----GAGNIVNAPLAPQTGSEVFRDAFLSRVLPSLD 231
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F PDLI++SAG+DAH DPLA + T + + Q A G+R V LEGGY+L
Sbjct: 232 NFAPDLIIISAGFDAHHRDPLAEINLTEDDFDWATGQLMQRAARHSGNRLVSLLEGGYDL 291
Query: 276 NSLSYSVA 283
L++SVA
Sbjct: 292 QGLAFSVA 299
>gi|147668956|ref|YP_001213774.1| histone deacetylase superfamily protein [Dehalococcoides sp. BAV1]
gi|146269904|gb|ABQ16896.1| histone deacetylase superfamily [Dehalococcoides sp. BAV1]
Length = 341
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 147/272 (54%), Gaps = 21/272 (7%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAGAGIALV 80
++ S H R+Y+S +E+ + G G T + +++ +L A G I V
Sbjct: 54 ELESFHKRSYISRVEE----------VGFSGGGWLDQDTVISLDSYEAALYAVGGVIEGV 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + F L RPPGHHA+P+ MGFCVF NVA+ A +A H LKRV ++D
Sbjct: 104 DKVLSRELDSV----FVLCRPPGHHALPEASMGFCVFNNVALGALHALNKHKLKRVAVVD 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG +DP + +LS HQ +P TG E G + LN+PLP G GD+
Sbjct: 160 FDVHHGNGIQHVCLNDPRLIYLSLHQIHHFPFTGDSRENGPFQ---NILNIPLPAGCGDS 216
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ F EVI P ++F P+LILV AGYDAH D + + + + + IK A+++
Sbjct: 217 HYQKAFDEVIGPYLRKFAPELILVCAGYDAHFADDMGEMCLSQQGFAGITRAIKHAAEEV 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
CG + VF LEGGY+ L+ V + L E
Sbjct: 277 CGGKLVFSLEGGYHYLGLAEGVGATLAVLLNE 308
>gi|420247448|ref|ZP_14750853.1| deacetylase, histone deacetylase/acetoin utilization protein
[Burkholderia sp. BT03]
gi|398071344|gb|EJL62605.1| deacetylase, histone deacetylase/acetoin utilization protein
[Burkholderia sp. BT03]
Length = 311
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 158/279 (56%), Gaps = 11/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E ++ +++ + +H++ ++ ++ +D A + G + ++G G T + +++ +
Sbjct: 43 LEWRDAPMGTLEQVQLIHSQDFI---DEVVDIAPKHGYMPLDG-GDTVMSPGSWEAVMRC 98
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA A VD+V R F RP GHHA P MGFC+F AIAA YA H
Sbjct: 99 VGAACAGVDAVLNKDARN----VFCATRPCGHHAEPGKAMGFCIFNQAAIAAAYAYDVHK 154
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+RV ++DFDVHHGNGT AFYD P++F+ S+HQ YPGTGK E G + LN+P
Sbjct: 155 LERVAVVDFDVHHGNGTQAAFYDRPELFYASSHQSPLYPGTGKSAETGVSH---NILNVP 211
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G R+ ++P + F+P+LI++SAG+DAH LDPLA+L+ ++ +
Sbjct: 212 LPPGCDSDLFRSRIEADMLPAVREFRPELIIISAGFDAHRLDPLAALRLDDDDFHWITRE 271
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ ++A + C R V LEGGY++ LS A +G
Sbjct: 272 LVRIADETCEGRVVSILEGGYSMEGLSGGTRAHVHALMG 310
>gi|328781356|ref|XP_001121726.2| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 6 [Apis
mellifera]
Length = 1129
Score = 181 bits (459), Expect = 4e-43, Method: Composition-based stats.
Identities = 101/279 (36%), Positives = 158/279 (56%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH + Y+ ++ + S++ E Y T+ + + G+ + +V
Sbjct: 586 ATKEELLLVHTKEYIDKIKNTKNLKSKELKKQAETYNSVYLHPETWSSACISTGSLLQVV 645
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V +++ G A+IRPPGHHA GFC+F NVAIAA+YA H +KRV I+D
Sbjct: 646 DNVLNGESQS----GIAIIRPPGHHATEDAACGFCIFNNVAIAAKYAIEFHHVKRVLIVD 701
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID--EVGRGDGEGSTLNLPL-P 194
+DVH+GNGT F +D + ++S H+ +GS +P + + + VG GEG T+N+P
Sbjct: 702 WDVHYGNGTQSIFEEDSKVLYISIHRYDNGSFFPNSKRANYSYVGSESGEGFTVNIPWNK 761
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A +F P+LILVSAG+DA + DPL T Y L +
Sbjct: 762 KGMGDAEYIAAFQQIIMPIAYQFNPELILVSAGFDACIGDPLGGCFVTPELYGHLTHWLS 821
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN NS+++++A ++ LG+P
Sbjct: 822 SLAN----GRVILSLEGGYNTNSIAHAMAICTKSLLGDP 856
Score = 146 bits (369), Expect = 1e-32, Method: Composition-based stats.
Identities = 89/240 (37%), Positives = 126/240 (52%), Gaps = 14/240 (5%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +T++ SL A G+ I LV+S+ + + G A+IRPPGHHA+ G+C F N
Sbjct: 198 YIHPSTYRLSLLAVGSTINLVESICKGEIQN----GMAIIRPPGHHAMKSEYCGYCFFNN 253
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PG--TG 174
VAIAA + ++ I+D+DVHHG T FYD+P + + S H ++G + P
Sbjct: 254 VAIAAEKVLCNNLASKILIVDWDVHHGQATQQMFYDNPQVIYFSIHRYENGEFWPNLRES 313
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
VG GEG N+PL G + +F +V++P A F+PDLI+VSAGYDA +
Sbjct: 314 NFHFVGDDLGEGYNFNVPLNKIGMTNADYLAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 373
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
P + T Y A++ L + LEGGY L SLS S A + R L +P
Sbjct: 374 CPEGEMLITPACY----AHLLSSLLCLASGKVAVILEGGYCLKSLSESAALTLRTLLSDP 429
>gi|355563788|gb|EHH20350.1| hypothetical protein EGK_03191 [Macaca mulatta]
Length = 671
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + K ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASKEELGLVHSPEYVSLVRKTQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ I
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ L + L G R LEGGY+L SL+ SV + +A LG+P+
Sbjct: 285 LTHLLQVLAGGRVCAMLEGGYHLESLAESVCMTVQALLGDPA 326
>gi|145588697|ref|YP_001155294.1| histone deacetylase superfamily protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
gi|145047103|gb|ABP33730.1| histone deacetylase superfamily [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 306
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/269 (38%), Positives = 152/269 (56%), Gaps = 16/269 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS + + VH+ +++ ++ ++A + G +++G T T+ +L A+GA IA V
Sbjct: 51 ASEEQLELVHSPDHIAFVK---EQAPESGYAMLDGD--TIMNPFTWTAALRASGAAIAGV 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + F IRPPGHHA P MGFC+F NVAIAARYA A+G+ RV IID
Sbjct: 106 DAVMKGEVEN----VFCAIRPPGHHAEPTRSMGFCLFDNVAIAARYAMEAYGIDRVAIID 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT AF++DP++ S Q YP +G D + +N+PLP +
Sbjct: 162 FDVHHGNGTEAAFFNDPNVLMCSFFQHPFYPYSGL-------DHANNMVNVPLPAATRGD 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+R++ E +P + F+P LI++SAG+DAH D L + Y + +K++A +
Sbjct: 215 VVRSIVDERWMPALRNFEPQLIIISAGFDAHREDDLGQMGLVEEDYAWITRRLKEIANEY 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
R V LEGGYNL++L SV +A
Sbjct: 275 AQGRIVSCLEGGYNLSALGRSVVAHVKAL 303
>gi|109094626|ref|XP_001112365.1| PREDICTED: histone deacetylase 10-like isoform 3 [Macaca mulatta]
Length = 671
Score = 181 bits (459), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + K ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASKEELGLVHSPEYVSLVRKTQVLGEEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ I
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ L + L G R LEGGY+L SL+ SV + +A LG+P+
Sbjct: 285 LTHLLQVLAGGRVCAMLEGGYHLESLAESVCMTVQALLGDPA 326
>gi|115495875|ref|NP_001068928.1| histone deacetylase 10 [Bos taurus]
gi|111306943|gb|AAI19836.1| Histone deacetylase 10 [Bos taurus]
gi|296486855|tpg|DAA28968.1| TPA: histone deacetylase 10 [Bos taurus]
Length = 670
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 154/280 (55%), Gaps = 14/280 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ YV+ L+ +++ L + Y +TF + A GA + LV
Sbjct: 55 ASEAELGLVHSPEYVALLQGTQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V R G AL+RPPGHH+ GFCVF NVAIAA++AQ+ HGL+R+ I+D
Sbjct: 115 DAVLTGAVRN----GLALVRPPGHHSQRATANGFCVFNNVAIAAKHAQQKHGLRRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYPGTGK---IDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP + + S H + G + + D VGRG G G T+NLP
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F V++P A F P+L+LVSAG+D+ + DP + T + A++
Sbjct: 231 VGMGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L + L G R LEGGY+L SLS SV RA LG+P+
Sbjct: 287 HLLQVLAGGRVCAVLEGGYHLESLSQSVCMMVRALLGDPA 326
>gi|193206283|ref|NP_001122780.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
gi|351063059|emb|CCD71106.1| Protein HDA-6, isoform c [Caenorhabditis elegans]
Length = 957
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 20/232 (8%)
Query: 60 YATATTFQESLAAAGAGIALVDSV----AASKNRPDPPLGFALIRPPGHHAIPKGPMGFC 115
Y T T + + A GA + VD + A +N ++RPPGHHA GFC
Sbjct: 520 YLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN------ALVIVRPPGHHASASKSSGFC 573
Query: 116 VFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGT 173
+F NVA+AA+YAQR H KRV I+D+DVHHGNGT + FY+D ++ ++S H+ G++
Sbjct: 574 IFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPI 633
Query: 174 GK---IDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
G+ +VG G GEG ++N+P G GD + F VI+P A +F PDL+L+SAG+D
Sbjct: 634 GEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFD 693
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A V DPL + T T+ ++ + LA G R + LEGGYNL S+S S
Sbjct: 694 AAVDDPLGEYKVTPETFALMTYQLSSLA----GGRIITVLEGGYNLTSISNS 741
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/303 (32%), Positives = 147/303 (48%), Gaps = 21/303 (6%)
Query: 1 MELTSEFRGSEIIE----LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS 56
+++ ++I+E L NF D+ H ++ V L ++ + + I
Sbjct: 42 LKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED----INSQ 97
Query: 57 GPTYATA--TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGF 114
Y + T FQ S+ A G+A V + + GFA++RPPGHHA P GF
Sbjct: 98 CEKYDSVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGF 157
Query: 115 CVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YP 171
C+F NVA AA A + G +R+ I+D DVHHG+GT FYDD + + S H+ +P
Sbjct: 158 CLFNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWP 216
Query: 172 G--TGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGY 228
D +G G G G NL L G D+ ++ V++P A +F P +++SAG+
Sbjct: 217 HLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGF 276
Query: 229 DAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRA 288
DA + DPL + T Y + ++K LA+ R + LEGGYN + +V R
Sbjct: 277 DALLGDPLGGMCLTPDGYSHILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRV 332
Query: 289 FLG 291
LG
Sbjct: 333 LLG 335
>gi|17540332|ref|NP_500787.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
gi|30923304|sp|Q20296.2|HDA6_CAEEL RecName: Full=Histone deacetylase 6
gi|351063052|emb|CCD71099.1| Protein HDA-6, isoform b [Caenorhabditis elegans]
Length = 955
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 20/232 (8%)
Query: 60 YATATTFQESLAAAGAGIALVDSV----AASKNRPDPPLGFALIRPPGHHAIPKGPMGFC 115
Y T T + + A GA + VD + A +N ++RPPGHHA GFC
Sbjct: 518 YLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN------ALVIVRPPGHHASASKSSGFC 571
Query: 116 VFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGT 173
+F NVA+AA+YAQR H KRV I+D+DVHHGNGT + FY+D ++ ++S H+ G++
Sbjct: 572 IFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPI 631
Query: 174 GK---IDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
G+ +VG G GEG ++N+P G GD + F VI+P A +F PDL+L+SAG+D
Sbjct: 632 GEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFD 691
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A V DPL + T T+ ++ + LA G R + LEGGYNL S+S S
Sbjct: 692 AAVDDPLGEYKVTPETFALMTYQLSSLA----GGRIITVLEGGYNLTSISNS 739
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 19/301 (6%)
Query: 1 MELTSEFRGSEIIE----LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS 56
+++ ++I+E L NF D+ H ++ V L ++ + + I
Sbjct: 42 LKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED----INSQ 97
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
Y + + S+ A G+A V + + GFA++RPPGHHA P GFC+
Sbjct: 98 CEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCL 157
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPG- 172
F NVA AA A + G +R+ I+D DVHHG+GT FYDD + + S H+ +P
Sbjct: 158 FNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHL 216
Query: 173 -TGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
D +G G G G NL L G D+ ++ V++P A +F P +++SAG+DA
Sbjct: 217 PESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDA 276
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ DPL + T Y + ++K LA+ R + LEGGYN + +V R L
Sbjct: 277 LLGDPLGGMCLTPDGYSHILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Query: 291 G 291
G
Sbjct: 333 G 333
>gi|408378633|ref|ZP_11176230.1| deacetylase [Agrobacterium albertimagni AOL15]
gi|407747770|gb|EKF59289.1| deacetylase [Agrobacterium albertimagni AOL15]
Length = 311
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/223 (42%), Positives = 124/223 (55%), Gaps = 7/223 (3%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TYA+ + Q +L A G I+ VD V K F RPPGHHA MGFC+F
Sbjct: 85 TYASQKSLQVALTAIGGAISAVDDVMTGKADN----AFVAGRPPGHHAEKSKAMGFCLFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
VAIAAR+ Q+ +G++RV I+D+DVHHGNGT D F+DDP + F STHQ YP +G DE
Sbjct: 141 TVAIAARHVQKTYGVERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQMPLYPYSGAKDE 200
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G+ + +N PL G R F ++P F PD IL+SAG+DAH DPLA
Sbjct: 201 TGQ---HRNIVNAPLSPNVGSDHFREAFKSRVLPALHDFSPDFILISAGFDAHHRDPLAQ 257
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ + + ++A +R V LEGGY+L L+ S
Sbjct: 258 INLVGEDFDWATGRLLEVADRFAHNRVVSLLEGGYDLEGLAES 300
>gi|393764246|ref|ZP_10352858.1| histone deacetylase/AcuC/AphA family protein [Alishewanella agri
BL06]
gi|392604876|gb|EIW87775.1| histone deacetylase/AcuC/AphA family protein [Alishewanella agri
BL06]
Length = 305
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 145/279 (51%), Gaps = 15/279 (5%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ ++ SPA+ + + H + YV L +A ++G I ++ T + +L
Sbjct: 42 VVMQRDASPATKEALYLAHGKLYVDEL---FAKAPREGHIWLDPD--TVMGPKSLNAALH 96
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG+GI VD V A N F +RPPGHHA + MGFC+ N+AIAA +A +
Sbjct: 97 AAGSGINAVDQVMAGTNEQ----AFCAVRPPGHHATREQAMGFCLLNNIAIAAEHALNQY 152
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
L R+ I+DFDVHHGNGT D F +P + F S+ + YP TG + E +NL
Sbjct: 153 QLSRIAIVDFDVHHGNGTEDIFQHEPRVLFCSSFEHPLYPYTG-----AETNNE-HIINL 206
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL GG TA R + +P RF P LIL+SAG+D H D +A Y +A
Sbjct: 207 PLAGGCRGTAWREQVKQHWLPAIDRFAPQLILISAGFDGHAEDEMAHFMLREEDYQWIAT 266
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+KQLA C R V LEGGY L++L SV + L
Sbjct: 267 ELKQLADKHCQGRIVAMLEGGYALSALGRSVVAFLKGLL 305
>gi|421915312|ref|ZP_16344922.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410122398|emb|CCM87547.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 349
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 40 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 92
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 93 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 148
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 149 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 208
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 209 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 268
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 269 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 328
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 329 ATFAQFQRQAIDRL 342
>gi|407782054|ref|ZP_11129269.1| histone deacetylase-like amidohydrolase [Oceanibaculum indicum P24]
gi|407206527|gb|EKE76478.1| histone deacetylase-like amidohydrolase [Oceanibaculum indicum P24]
Length = 308
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F +RPPGHHA MGFC+F + A+ A +A+ HGLKRV ++DFDVHHGNGT D F+
Sbjct: 115 AFCAVRPPGHHAEAARAMGFCLFNSAAVGAYHARAVHGLKRVAVVDFDVHHGNGTQDIFW 174
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
+D ++F+ STHQ YPGTG +E G + LN+PLP + A R F E ++P
Sbjct: 175 NDHEMFYASTHQAPLYPGTGAANERGLDN----ILNVPLPPLADGAAFRHAFAEHLLPAL 230
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+PDL+++SAG+DAH DPLA+L + + +LA CG R V LEGGY+
Sbjct: 231 TEFRPDLVIISAGFDAHKDDPLAALCLEEEDFAWATRELMRLAAYQCGGRLVSTLEGGYD 290
Query: 275 LNSLSYSVADSFRAFLGE 292
L++L S A A +G+
Sbjct: 291 LDALGRSAAAHVAALMGQ 308
>gi|386033664|ref|YP_005953577.1| putative deacetylase [Klebsiella pneumoniae KCTC 2242]
gi|424829463|ref|ZP_18254191.1| histone deacetylase family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|425080349|ref|ZP_18483446.1| hypothetical protein HMPREF1306_01078 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|428937532|ref|ZP_19010789.1| putative deacetylase [Klebsiella pneumoniae JHCK1]
gi|339760792|gb|AEJ97012.1| putative deacetylase [Klebsiella pneumoniae KCTC 2242]
gi|405606463|gb|EKB79453.1| hypothetical protein HMPREF1306_01078 [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|414706885|emb|CCN28589.1| histone deacetylase family protein [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|426296059|gb|EKV58772.1| putative deacetylase [Klebsiella pneumoniae JHCK1]
Length = 371
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 350
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 351 ATFAQFQRQAIDRL 364
>gi|421911408|ref|ZP_16341169.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410114661|emb|CCM83794.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
Length = 373
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 64 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 116
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 117 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 172
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 173 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 232
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 233 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 292
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 293 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 352
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 353 ATFAQFQRQAIDRL 366
>gi|378977508|ref|YP_005225649.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419975065|ref|ZP_14490479.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419981011|ref|ZP_14496291.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419987489|ref|ZP_14502608.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419994084|ref|ZP_14509006.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419998063|ref|ZP_14512854.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420005097|ref|ZP_14519725.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420009787|ref|ZP_14524267.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420016025|ref|ZP_14530321.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420021309|ref|ZP_14535490.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420026832|ref|ZP_14540831.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420033808|ref|ZP_14547607.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420038943|ref|ZP_14552584.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420045417|ref|ZP_14558885.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420050264|ref|ZP_14563565.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420056908|ref|ZP_14570058.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420062483|ref|ZP_14575454.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420067289|ref|ZP_14580083.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420072395|ref|ZP_14585033.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420079655|ref|ZP_14592097.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420083958|ref|ZP_14596228.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|424934615|ref|ZP_18352987.1| Putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|428152297|ref|ZP_18999976.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428940668|ref|ZP_19013744.1| putative deacetylase [Klebsiella pneumoniae VA360]
gi|364516919|gb|AEW60047.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397344167|gb|EJJ37304.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397344324|gb|EJJ37459.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397344539|gb|EJJ37672.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397357027|gb|EJJ49808.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397361346|gb|EJJ54010.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397363193|gb|EJJ55835.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397375605|gb|EJJ67890.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397380494|gb|EJJ72676.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397386898|gb|EJJ78955.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397394050|gb|EJJ85790.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397394497|gb|EJJ86224.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397403687|gb|EJJ95238.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397409798|gb|EJK01100.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397411537|gb|EJK02791.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397420120|gb|EJK11216.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397427964|gb|EJK18718.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397428362|gb|EJK19104.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397439137|gb|EJK29596.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397443490|gb|EJK33807.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450658|gb|EJK40758.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|407808802|gb|EKF80053.1| Putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|426301891|gb|EKV64114.1| putative deacetylase [Klebsiella pneumoniae VA360]
gi|427537743|emb|CCM96114.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
Length = 371
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 350
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 351 ATFAQFQRQAIDRL 364
>gi|58036475|dbj|BAD88603.1| deacetylase [Enterobacter aerogenes]
Length = 323
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 169/316 (53%), Gaps = 17/316 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 14 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 66
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 67 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 122
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 123 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 182
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 183 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 242
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 243 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 302
Query: 311 AKV----KQAIERVKH 322
A +QAI+R+
Sbjct: 303 AAFAQFQRQAIDRLAQ 318
>gi|242022432|ref|XP_002431644.1| histone deacetylase hda2, putative [Pediculus humanus corporis]
gi|212516952|gb|EEB18906.1| histone deacetylase hda2, putative [Pediculus humanus corporis]
Length = 1146
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 156/281 (55%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I H +++ ++K ++++ Y + +++ +L AAG + +V
Sbjct: 555 ATEEEILLSHTNSHLEDMKKLPTMSAEELNEKGNSYDSIYLHSKSYECALLAAGTLLQVV 614
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV + R G A++RPPGHHA GFC+F NV+IAA+YA H LKR+ ++D
Sbjct: 615 DSVINGEARS----GVAVVRPPGHHAEDDTACGFCLFNNVSIAAKYAIEVHSLKRILVLD 670
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--GKIDEVGRGDGEGSTLNLPLP- 194
+DVHHGNGT F +D + ++S H+ +P T G D VG G GEG +N+P
Sbjct: 671 WDVHHGNGTQKIFEEDDRVLYISLHRYNHGRFFPTTKEGDHDRVGIGRGEGFNVNIPWNR 730
Query: 195 --GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
GG D FH +++P A +F P+L+LVSAG+DA + DPL + T Y A+
Sbjct: 731 PGGGMSDGDYIAAFHSIVLPIAYQFNPELVLVSAGFDACIHDPLGHCKVTPEAY----AH 786
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ L + + LEGGYN+ S+SY++ +A LG+P
Sbjct: 787 MTHWLTTLANGKVILSLEGGYNVTSISYALTLCTKALLGDP 827
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/312 (32%), Positives = 162/312 (51%), Gaps = 23/312 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIAL 79
A+ ++I + H + L++ + + + + Y T++ SL A G+ I L
Sbjct: 114 ATEEEILTQHTIDKIKVLKETQNENDETKLEQLSSKYDSVYVNNFTYECSLLAVGSTIDL 173
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD++ + + G A+IRPPGHHA+ G+C + NVAIAA+ A + L+R+ I+
Sbjct: 174 VDAICKGEIQN----GMAIIRPPGHHAMRDEYCGYCFYNNVAIAAQLALKKFNLQRILIV 229
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYP---GTGKIDEVGRGDGEGSTLNLPL- 193
D+D+HHG T FYDD + + S H+ GS+ +G G+G N+PL
Sbjct: 230 DWDIHHGQATQQMFYDDKRVVYFSIHRYDHGSFWPELRESNFHYIGDSAGKGKNFNIPLN 289
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G D +F +V++P A F+P+LI++SAGYDA + P S++ + Y L + +
Sbjct: 290 ETGMKDADYLAIFQQVLLPMAYEFQPELIIISAGYDAAINCPEGSMEVSPACYSHLLSPL 349
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL-YEEPSAK 312
LA G + LEGGY L SLS VA + R LG+P+ P+++ + P
Sbjct: 350 MGLA----GGKVAVILEGGYCLKSLSEGVALTLRTLLGDPA-------PSLIDFGLPCDS 398
Query: 313 VKQAIERVKHIH 324
V ++I V ++H
Sbjct: 399 VVESILNVIYVH 410
>gi|238893553|ref|YP_002918287.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402781952|ref|YP_006637498.1| deacetylase [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|425077820|ref|ZP_18480923.1| hypothetical protein HMPREF1305_03750 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425088453|ref|ZP_18491546.1| hypothetical protein HMPREF1307_03918 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|425090410|ref|ZP_18493495.1| hypothetical protein HMPREF1308_00655 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|238545869|dbj|BAH62220.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|402542820|gb|AFQ66969.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae 1084]
gi|405590799|gb|EKB64312.1| hypothetical protein HMPREF1305_03750 [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405601545|gb|EKB74698.1| hypothetical protein HMPREF1307_03918 [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405614094|gb|EKB86815.1| hypothetical protein HMPREF1308_00655 [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
Length = 371
Score = 181 bits (458), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 350
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 351 AAFAQFQRQAIDRL 364
>gi|50290843|ref|XP_447854.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527165|emb|CAG60803.1| unnamed protein product [Candida glabrata]
Length = 693
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 168/313 (53%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH++ ++ +EK ++ + E Y ++ S G I
Sbjct: 113 ATAEEILEVHSKEHLEFIEKTEKMNREELLKETEKGDSVYFNNDSYATSRLPCGGAIEAC 172
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 173 KAVVEGRVKN----SLAVVRPPGHHAEPEAAGGFCLFSNVAVAAKNILKNYPESVRRILI 228
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNGT AFYDD + ++S H+ YPGT G+ D++G G G+G N+
Sbjct: 229 LDWDVHHGNGTQKAFYDDDRVLYISLHRFELGKYYPGTIQGQYDQIGEGKGKGFNCNITW 288
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + F+PDL+++S+G+DA D + T Y +
Sbjct: 289 PVGGVGDAEYMWAFEQVVMPMGREFQPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 348
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P EP A+
Sbjct: 349 LKSLAR---GNLCV-VLEGGYNLDAIAISALSVAKILIGEP--PDELPDP---LREPKAE 399
Query: 313 VKQAIERVKHIHS 325
+ I++V + S
Sbjct: 400 ALEIIDKVISLQS 412
>gi|330002008|ref|ZP_08304146.1| histone deacetylase-like amidohydrolase, partial [Klebsiella sp. MS
92-3]
gi|328537501|gb|EGF63732.1| histone deacetylase-like amidohydrolase [Klebsiella sp. MS 92-3]
Length = 338
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 29 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 81
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 82 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 137
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 138 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 197
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 198 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 257
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 258 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 317
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 318 AAFAQFQRQAIDRL 331
>gi|372488624|ref|YP_005028189.1| deacetylase [Dechlorosoma suillum PS]
gi|359355177|gb|AEV26348.1| deacetylase, histone deacetylase/acetoin utilization protein
[Dechlorosoma suillum PS]
Length = 308
Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 147/270 (54%), Gaps = 17/270 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+++ + H+ AY+ L++ A + GI ++ T T+ + +AGAG+ V
Sbjct: 52 ATLEQMLRAHSPAYLERLKRT---APENGIAHLDPD--TAMNPHTWTAAQRSAGAGVMAV 106
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + F IRPPGHHA + MGFC N+A+AAR+A HGLKRV I+D
Sbjct: 107 DLVLKGEATD----AFCAIRPPGHHAERENCMGFCFVNNIAVAARHALEVHGLKRVAIVD 162
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTL-NLPLPGGSGD 199
FDVHHGNGT D F DDP + +S Q +P +G DG + N+PLP G+G
Sbjct: 163 FDVHHGNGTEDIFKDDPRVLMVSMFQHPFFPYSG-------ADGTADNMCNVPLPAGTGG 215
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
R V ++ +P F+P+L+ +SAG+DAH D + S++ + + +K +A+
Sbjct: 216 EDFRMVVSDIWLPRLHEFRPELLFISAGFDAHYEDDMGSMKLVESDFAWVTQQLKTVAQR 275
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
C R V LEGGY L+SL+ SV RA
Sbjct: 276 HCQGRIVSMLEGGYVLSSLARSVCAHLRAL 305
>gi|15679205|ref|NP_276322.1| acetylpolyamine aminohydolase [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3024979|sp|O27262.1|Y1194_METTH RecName: Full=Uncharacterized protein MTH_1194
gi|2622302|gb|AAB85683.1| acetylpolyamine aminohydolase [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 331
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 155/289 (53%), Gaps = 26/289 (8%)
Query: 13 IELKNFSP-------ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
IE + SP A +DDI VH+ +V LE R G + + TY T +
Sbjct: 31 IESSDLSPRFVEPGMAGIDDILMVHSSTHVEYLEVFAGRGG--GWLDYD----TYMTPES 84
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
F S+A AG A++ + A ++ ++L RPPGHHA MGFC+F N+AIA
Sbjct: 85 F--SVARLSAGGAMLAAEEALRD----GWSYSLGRPPGHHATYDRSMGFCIFNNIAIAIE 138
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGD 183
+A+R G+ R ++DFDVHHGNGT+ FY D D+ ++S HQD +PGTG IDE G G+
Sbjct: 139 HARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDVMYISIHQDPRTLFPGTGFIDETGSGE 198
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
GEG LN+P+P GSG+ + ++ + F+PD+I VSAG+DAH DPLA +
Sbjct: 199 GEGFNLNIPMPRGSGNREYLWILGMILPAVLEGFRPDMIFVSAGFDAHRRDPLAEIMVDE 258
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + I Q G C LEGGY+ +L S R GE
Sbjct: 259 EFFSWIGWFIHQ-----TGLPCTAVLEGGYDPEALGRSNIAFMRGLDGE 302
>gi|407775200|ref|ZP_11122495.1| putative deacetylase [Thalassospira profundimaris WP0211]
gi|407281625|gb|EKF07186.1| putative deacetylase [Thalassospira profundimaris WP0211]
Length = 310
Score = 180 bits (457), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 150/269 (55%), Gaps = 12/269 (4%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDS 82
+D I VH AYV +K M GI ++G TY + + + +L + G VD+
Sbjct: 52 IDLIKKVHDPAYV---DKVMASIPDHGIEPLDGD--TYVSPGSGRAALRSVGGACVAVDA 106
Query: 83 VAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFD 142
V + F RPPGHHA MGFC+F N AIAA +A+ G+KRV ++DFD
Sbjct: 107 VMEGHEKN----AFVATRPPGHHAEYDRAMGFCLFNNAAIAAHHARNKFGIKRVAVMDFD 162
Query: 143 VHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
VHHGNGT D FY+D D+F+ STHQ YPGTG E G + + LN+ + GSG +
Sbjct: 163 VHHGNGTQDLFYNDADLFYCSTHQWPLYPGTGAESERGCAN---NILNVGMVAGSGTKEV 219
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
+ F+ ++P FKP+L+++SAG+D H DPLA L + + + + LA++ CG
Sbjct: 220 QEAFNSTVLPGIAAFKPELLIISAGFDGHKNDPLAGLCYVADDFVWMTKQLMDLAEEQCG 279
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L SL+ S R +G
Sbjct: 280 GRVVSLLEGGYDLPSLATSAVQHVRTLMG 308
>gi|449050902|ref|ZP_21731789.1| putative deacetylase [Klebsiella pneumoniae hvKP1]
gi|448876431|gb|EMB11422.1| putative deacetylase [Klebsiella pneumoniae hvKP1]
Length = 371
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 169/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALVRFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 350
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 351 ATFAQFQRQAIDRL 364
>gi|448356884|ref|ZP_21545602.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
gi|445651852|gb|ELZ04758.1| histone deacetylase [Natrialba chahannaoensis JCM 10990]
Length = 372
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 158/319 (49%), Gaps = 18/319 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ L + PA+ + + H A++ L+ A G I E T A TF+ + A
Sbjct: 59 VTLADVEPATREQLERTHTAAHIDELQAFC--ADGGGRITAE----TGANEHTFRAATHA 112
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AGA + + P + +A++RP GHHA P+ GFC F NVA+AA +
Sbjct: 113 AGATCLAAEHALET---PADNVPYAMVRPSGHHAQPEQVDGFCYFNNVAVAADHVLETTD 169
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD------GSYPGTGKIDEVGRGDGEG 186
+RV I+D+DVHHGNGT + F D D+ +S H D ++P TG +DEVG GDGEG
Sbjct: 170 TERVAIVDWDVHHGNGTQECFEDRDDVLVISIHNDHWSWDPEAHPQTGDLDEVGTGDGEG 229
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+N+PLP G+GD VF ++ P + + P L+L+SAG DA +DPL T G +
Sbjct: 230 YNVNVPLPPGTGDEGYEHVFDRIVEPLLRSYDPGLLLISAGQDAGTMDPLGRNVVTKGGF 289
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY 306
L + LA + EGGY ++ L+Y+ LG + D+P
Sbjct: 290 EELGRRARVLADEYADGNLAVVQEGGYQVSHLAYATLGVLEGVLGVETG---IDDPMAWM 346
Query: 307 EEPSAKVKQAIERVKHIHS 325
+E + AIE + HS
Sbjct: 347 DEDYDSARHAIEDIATYHS 365
>gi|448434388|ref|ZP_21586198.1| histone deacetylase superfamily protein [Halorubrum tebenquichense
DSM 14210]
gi|445685304|gb|ELZ37659.1| histone deacetylase superfamily protein [Halorubrum tebenquichense
DSM 14210]
Length = 334
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 118/314 (37%), Positives = 165/314 (52%), Gaps = 27/314 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA I +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYAEADPAEKVAITAVHDAGYVDELES----------FVADGGGSWDPDTVASDGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAG A A +++ + R P FA+ RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALTAAGLAQWAAREAIDGASGRQTP---FAIGRPPGHHAVTGDAMGFCFFNNAAVAAQTV 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG ++E G G+GEG+
Sbjct: 145 LDEGLADRVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEDGLYPDTGALNETGEGEGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E + P RF PDL+LVSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEAVAPAVDRFDPDLVLVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA D+ + + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRTLASDVDAADA-YVLEGGYGLDTLAEGVSMVHETYDGR--------TPVDTDE 315
Query: 308 EPSAKVKQAIERVK 321
EP K + + ++
Sbjct: 316 EPDEKTEALVADLR 329
>gi|355694224|gb|AER99598.1| histone deacetylase 10 [Mustela putorius furo]
Length = 546
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/242 (42%), Positives = 135/242 (55%), Gaps = 14/242 (5%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y +TF + AAGA + LVD+V G AL+RPPGHH+ GFCVF
Sbjct: 27 VYFHPSTFHCARLAAGAALQLVDAVLTGTAHN----GLALVRPPGHHSQRAAANGFCVFN 82
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGT 173
NVAIAARYAQ+ HG+ R+ I+D+DVHHG G F DDP + + S H+ Y
Sbjct: 83 NVAIAARYAQKRHGVHRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLRE 142
Query: 174 GKIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
D VG G G G T+NLP G G+ F V++P A F P+L+LVSAG+D+ +
Sbjct: 143 SDADAVGLGPGRGFTVNLPWNQVGMGNADYMAAFLHVLLPVAFEFDPELVLVSAGFDSAI 202
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
DP +Q T + A++ QL + L G R LEGGY+L SLS SV +A LG+
Sbjct: 203 GDPEGQMQATPECF----AHLTQLLQVLAGGRVCAVLEGGYHLESLSQSVCMVVKALLGD 258
Query: 293 PS 294
P+
Sbjct: 259 PA 260
>gi|348513065|ref|XP_003444063.1| PREDICTED: histone deacetylase 10-like [Oreochromis niloticus]
Length = 590
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 158/299 (52%), Gaps = 15/299 (5%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
+I H+ Y+ ++K + + + L G Y + + AAGA + LVDSV
Sbjct: 59 EILLAHSEEYLEAVKKTPYMSLEDLMELTRQYGDVYFHPNIYHCAKLAAGAALQLVDSVM 118
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
K R G AL+RPPGHH++ GFCVF NVAIAARYA++ +G++RV I+D+D+H
Sbjct: 119 TGKVRN----GMALVRPPGHHSMRSAANGFCVFNNVAIAARYAKQKYGVRRVLIVDWDIH 174
Query: 145 HGNGTNDAFYDDPDIFFLSTHQ---DGSYP--GTGKIDEVGRGDGEGSTLNLPLPG-GSG 198
HG G F DDP + + S H+ +P D VG+ G G +N+P G
Sbjct: 175 HGQGVQYCFEDDPSVLYFSWHRYEHQKFWPHLRNSDYDIVGKEKGAGFNINVPWNKVGME 234
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
+ +VF V++P A F PDL+LV AG+D+ + DP + T + A++ L
Sbjct: 235 NGDYLSVFCHVLLPVAYEFCPDLVLVCAGFDSAIGDPEGEMCATPDVF----AHLTHLLM 290
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP-SKASEFDNPAILYEEPSAKVKQA 316
+L G + LEGGYNL SL+ SV + + LG+P + + ++P I E V+ A
Sbjct: 291 NLAGGKLCAVLEGGYNLTSLAQSVCQTVQTLLGDPVPRPASLNSPCISALESLQCVRSA 349
>gi|428166114|gb|EKX35096.1| hypothetical protein GUITHDRAFT_160215 [Guillardia theta CCMP2712]
Length = 380
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 143/264 (54%), Gaps = 24/264 (9%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE-----SLAAAG 74
PA++D++ VH++ Y++ L + L E G F +L AAG
Sbjct: 67 PATLDEVLRVHSQEYLTKLTE-----------LSECEGGDAGDCAPFSPGGLGIALLAAG 115
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ I++V++V + G+ L+RPPGHHA GFC+ N+AIAA++A GL+
Sbjct: 116 SAISMVNAVLDERIVN----GYCLLRPPGHHAERDRGRGFCLLNNIAIAAKHAIEVRGLE 171
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPL 193
R+ IID+DVHHGNGT AFYD + F+S HQD +YP +G DE+G+G G G NLPL
Sbjct: 172 RIVIIDWDVHHGNGTQQAFYDSDKVMFISIHQDRNYPLDSGFADELGQGLGLGFNCNLPL 231
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRF---KPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P GSGD A R F KP LI++S G+D DPL S+ + T+ L
Sbjct: 232 PPGSGDGAYREAIRAACSLAETSFGDEKPQLIMISCGFDCSFFDPLGSMMCHSETFRYLT 291
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+LA C + + EGGY+
Sbjct: 292 QQVKELADRCCSGKLILLHEGGYS 315
>gi|170699758|ref|ZP_02890792.1| histone deacetylase superfamily [Burkholderia ambifaria IOP40-10]
gi|170135349|gb|EDT03643.1| histone deacetylase superfamily [Burkholderia ambifaria IOP40-10]
Length = 369
Score = 180 bits (456), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 147/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ D+ +H +Y+ D G + G G +Y AT
Sbjct: 61 LDMRGAAPATTGDLLRIHPASYLDAFRALSDAHGGDLGDLAPFGKG-SYEIATL------ 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA +D+V F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 114 SAGLAIAAIDTVVGEHAAN----AFSLSRPPGHHCLRDRPMGFCLLANIPIAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDPD +S HQD + PG + G G G G+ LN
Sbjct: 170 GIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGGGDRGEGAGVGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F +++P +RF+P+LI+V++G DA +DPLA + T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVLPALERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K+ A+ CG R V EGGY+
Sbjct: 290 RAMKEAAQRHCGGRLVIVHEGGYS 313
>gi|195953231|ref|YP_002121521.1| histone deacetylase [Hydrogenobaculum sp. Y04AAS1]
gi|195932843|gb|ACG57543.1| histone deacetylase superfamily [Hydrogenobaculum sp. Y04AAS1]
Length = 309
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 153/274 (55%), Gaps = 12/274 (4%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
I+ + A+V++++ +H Y+ ++ + + G L TYA ++ ++
Sbjct: 41 ILSFEKPRKATVEEVSKIHDTYYI---QEIYEFCKKGGGYL---DPDTYAYQHSYDAAMM 94
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AGA + ++ + +K F L+RPPGHHA MGFC+F NVAI AR AQ
Sbjct: 95 VAGAILKAIEDIKDAKQEA----AFCLVRPPGHHAEYAKAMGFCIFNNVAIGARKAQNL- 149
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
G K+V+I DFDVHH NGT FY+D +F STH YPGTG DE G G+G G+TLN+
Sbjct: 150 GYKKVYIADFDVHHPNGTQHTFYEDGSVFLFSTHCYPFYPGTGAADERGFGEGFGTTLNV 209
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G+GD V+ + + FKPD++L+SAGYD H DPL ++ T+ + + +
Sbjct: 210 PLRAGTGDETYIEVYQTKFLGSFRAFKPDILLISAGYDLHEDDPLGPMRVTSQSIKEITS 269
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADS 285
+ AK+L V LEGGYN N+ + + D+
Sbjct: 270 ILIDAAKEL-NIPVVATLEGGYNYNATAQGILDT 302
>gi|418060581|ref|ZP_12698487.1| histone deacetylase superfamily [Methylobacterium extorquens DSM
13060]
gi|373565888|gb|EHP91911.1| histone deacetylase superfamily [Methylobacterium extorquens DSM
13060]
Length = 351
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/236 (41%), Positives = 133/236 (56%), Gaps = 6/236 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T +A T++ + A GAG+ VD+V + F IRPPGHHA MGFC+F
Sbjct: 122 TVVSAGTWEAVIRAVGAGLRAVDAVMDRGS--GIANAFCQIRPPGHHAGRDTAMGFCLFN 179
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
VAIAAR+A+ HG +RV ++DFDVHHGNGT +AF D +F+ STH+ +PGTG E
Sbjct: 180 AVAIAARHARVRHGAERVAVVDFDVHHGNGTQEAFRSDRSLFYGSTHRMPWFPGTGAASE 239
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G G+ N PL G R + + I+P F+PDL+LVSAG+DAH DPL
Sbjct: 240 T----GVGNVWNAPLSEGDDCGPFRAAWTDRILPALDAFRPDLVLVSAGFDAHEGDPLGG 295
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L+ + + + ++A CG R V LEGGY L++L+ S A RA S
Sbjct: 296 LRLVEDDFAWVTTRVAEVAHRHCGGRIVSMLEGGYVLDALARSSAAHVRALAASAS 351
>gi|259089444|ref|NP_954668.2| histone deacetylase 10 [Mus musculus]
gi|408360128|sp|Q6P3E7.2|HDA10_MOUSE RecName: Full=Histone deacetylase 10; Short=HD10
gi|148672428|gb|EDL04375.1| histone deacetylase 10, isoform CRA_d [Mus musculus]
Length = 666
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 158/282 (56%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ ++K ++ L + Y TF + AAGA + LV
Sbjct: 55 ASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVA+AA++A++ +GL+R+ I
Sbjct: 115 DAVLTGAVHN------GLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H + GS+ D VG+G G+G T+NLP
Sbjct: 169 VDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 285 LTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 326
>gi|182677935|ref|YP_001832081.1| histone deacetylase superfamily protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182633818|gb|ACB94592.1| histone deacetylase superfamily [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 348
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/267 (38%), Positives = 138/267 (51%), Gaps = 14/267 (5%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA-AAGAGIALVDSVA 84
I VH YV + D ++G + + GP + E++A A G A V+ V
Sbjct: 94 ILRVHPETYVDAIH---DACPKEGYVEV---GPDTILSPGSWEAIAHAIGGTTAAVNEVM 147
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
R D F RPPGHHA + PMGFC F AIAAR+AQ HG +RV I+DFDVH
Sbjct: 148 ----RGDAKNAFLAARPPGHHAEREVPMGFCFFNTPAIAARHAQAVHGAERVAIVDFDVH 203
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNGT D F+ D + + STH+ +PGTG + E G + +N PL G A R
Sbjct: 204 HGNGTQDIFWSDASVLYASTHEMPLFPGTGSVAETGE---HNNIVNAPLKAGDDGVAFRE 260
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
I+P F PD I++S+G+DAH LDP+ L + A I +LA+ R
Sbjct: 261 AMESRILPAVDAFHPDFIVISSGFDAHRLDPMGHLNLVEADFMWATAKIMELAERHAKGR 320
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLG 291
V LEGGY+L +L+ SVA +G
Sbjct: 321 VVSILEGGYDLEALARSVAVHVLTLMG 347
>gi|254282793|ref|ZP_04957761.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
gi|219678996|gb|EED35345.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
Length = 371
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 5/213 (2%)
Query: 63 ATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
A +F+ ++ +AG + +++V + D +AL+RPPGHHA+ MGFC+FGN AI
Sbjct: 105 AGSFEIAMLSAGGCLVALEAVLSG----DVDNAYALVRPPGHHAVADAGMGFCLFGNAAI 160
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGR 181
A A HGL+R+ +D+DVHHGNGT AFYDDP +S HQD + P +G + E G
Sbjct: 161 AGFSALEDHGLQRIAFVDWDVHHGNGTQSAFYDDPRALTISIHQDNCFPPDSGHVHERGE 220
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
GEG +N+PLP GSG A F +V++P ++P++I+V +G+DA DPL +Q
Sbjct: 221 SAGEGYNVNIPLPPGSGVGAYEAAFEQVVIPALDAYQPEVIIVPSGFDAGAYDPLGRMQM 280
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
T+ +Y L + + A CG R + EGGYN
Sbjct: 281 TSDSYRNLTSLLLAAADRHCGGRLLMTHEGGYN 313
>gi|39795662|gb|AAH64018.1| Histone deacetylase 10 [Mus musculus]
Length = 666
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 158/282 (56%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ ++K ++ L + Y TF + AAGA + LV
Sbjct: 55 ASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYDAVYFHPDTFHCARLAAGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVA+AA++A++ +GL+R+ I
Sbjct: 115 DAVLTGAVHN------GLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H + GS+ D VG+G G+G T+NLP
Sbjct: 169 VDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 285 LTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 326
>gi|312136626|ref|YP_004003963.1| histone deacetylase [Methanothermus fervidus DSM 2088]
gi|311224345|gb|ADP77201.1| Histone deacetylase [Methanothermus fervidus DSM 2088]
Length = 346
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 165/313 (52%), Gaps = 34/313 (10%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +DD+ VH Y++ +++ + G + + TYAT+ T+ + AAG I
Sbjct: 48 AKIDDLKKVHELHYINYIKEFCKKGG--GYLDFD----TYATSYTYDVASLAAGGAIEAS 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ K +++ RPPGHHA MGFC+F N+AI + K I+D
Sbjct: 102 KLIINGKK-----WVYSISRPPGHHATKNKAMGFCIFNNLAIGLENLRNK--FKNFLILD 154
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
FD+H+GNGT + +Y+DP + ++S HQD +P G IDE+G+ +GEG +N+P+P S
Sbjct: 155 FDLHYGNGTAEIYYEDPSVLYISIHQDPKTIFPSCGFIDEIGKNEGEGYNINIPMPPNSD 214
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D + E+I P FKP++IL+ AG+DAH DPL S+ T Y +A +++
Sbjct: 215 DNDYIWILSEIIPPIIDDFKPEIILIEAGFDAHKRDPLGSINLTEKFYAWIAKFLRKFNL 274
Query: 259 DLCGSRCVFFLEGGYNLNSLSYS----VADSFRAFLGEPSKASEFDNPAIL--YEEPSAK 312
+ CV LEGGYNL +L YS + S LG +F N IL ++EP
Sbjct: 275 PIM---CV--LEGGYNLKALKYSNLMFILYSNPELLG----MDQFSNLRILDGFKEP--- 322
Query: 313 VKQAIERVKHIHS 325
K+ RVK ++S
Sbjct: 323 -KKVKIRVKKLYS 334
>gi|402884655|ref|XP_003905791.1| PREDICTED: histone deacetylase 10 isoform 1 [Papio anubis]
Length = 671
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 152/280 (54%), Gaps = 18/280 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + K ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASKEELGLVHSPEYVSLVRKTQVLGEEELQALSRQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA YA++ HGL R+ I
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAYAKQKHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ L + L G R LEGGY+L SL+ SV + + LG+
Sbjct: 285 LTHLLQVLAGGRVCAMLEGGYHLESLAESVCMTVQTLLGD 324
>gi|152969101|ref|YP_001334210.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|150953950|gb|ABR75980.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 371
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 168/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + A G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQPR 350
Query: 311 AKVKQ----AIERV 320
A Q AI+R+
Sbjct: 351 AAFAQFQREAIDRL 364
>gi|444369897|ref|ZP_21169602.1| histone deacetylase domain protein [Burkholderia cenocepacia
K56-2Valvano]
gi|443598379|gb|ELT66743.1| histone deacetylase domain protein [Burkholderia cenocepacia
K56-2Valvano]
Length = 247
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 81/175 (46%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 101 PPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIF 160
PPGHH + PMGFC+ N+ IA A+ HG++RV +ID+DVHHGNGT +YDDPD
Sbjct: 17 PPGHHCLRDRPMGFCMLANIPIAIEAARAKHGIERVAVIDWDVHHGNGTQSIYYDDPDTL 76
Query: 161 FLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKP 219
+S HQD +P G D+ G G G G+ LN+PL GSGD A R F +++P RF+P
Sbjct: 77 TISLHQDRCFPPGYSGADDRGEGAGIGANLNVPLLAGSGDDAYRYAFERIVLPALARFRP 136
Query: 220 DLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+LI++++G DA +DPLA +Q T +Y + +K+ A+ CG R V EGGY+
Sbjct: 137 ELIVIASGLDASAVDPLARMQLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYS 191
>gi|348511631|ref|XP_003443347.1| PREDICTED: histone deacetylase 4-like [Oreochromis niloticus]
Length = 1117
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 176/328 (53%), Gaps = 37/328 (11%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQE------S 69
AS++++ +VH+ A+V + L + +D + + + G + T + E +
Sbjct: 745 ASLEELQTVHSEAHVMLYGTNPLRQKLDSSVNPMFVRLPCGGIGVDSDTIWNEVHSSSAA 804
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G+ + LV VA+ + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 805 RLAVGSVVELVFKVASGELKN----GFAIVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 860
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP + +LS H+ DG+ +PG+G DEVG G GEG
Sbjct: 861 RLSVSKILIVDWDVHHGNGTQQAFYADPSVLYLSLHRYDDGNFFPGSGAPDEVGSGAGEG 920
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 921 FNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDMVLVSSGFDAVDGHA-PPLGGY 979
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ T + L + LA G R V LEGG++L ++ + A LG +E
Sbjct: 980 KLTAKCFGYLTRQLMGLA----GGRLVLALEGGHDLTAICDASEACISALLG-----NEL 1030
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D +L + P+A +++E+V HS
Sbjct: 1031 DPIPDEVLQQRPNANAVRSMEKVIEFHS 1058
>gi|288961623|ref|YP_003451933.1| histone deacetylase superfamily protein [Azospirillum sp. B510]
gi|288913903|dbj|BAI75389.1| histone deacetylase superfamily protein [Azospirillum sp. B510]
Length = 309
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/271 (39%), Positives = 150/271 (55%), Gaps = 15/271 (5%)
Query: 4 TSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
T EF ++E + A+V+ + H R+++ + + G+ T +
Sbjct: 36 TEEF---HMLERQEAPRATVEQLLRAHPRSHIDRVLSLIPEVEHAGV-----DADTVVSP 87
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
+ + +L AAGA A VD+VA ++R F +RPPGHHA + MGFC+F N A+
Sbjct: 88 GSGEAALRAAGAVCAAVDAVATGQSRN----AFCAVRPPGHHAEREKAMGFCLFNNAAVG 143
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
A +A+ AHGL+RV ++DFDVHHGNGT D DPD+ + STHQ YPGTG E G
Sbjct: 144 AFHARAAHGLQRVAVMDFDVHHGNGTQDILQHDPDMLYCSTHQSPLYPGTGDAGEKGE-- 201
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
G+ +N PLP +G R VI+P FKPDL+++SAG+DAH DPLA L
Sbjct: 202 -YGNCVNAPLPAMAGSPEFRHAMTHVILPAIDHFKPDLLIISAGFDAHSRDPLAGLHLID 260
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ + +LA+ CG+R V LEGGYN
Sbjct: 261 DDFVWATRKLGELARTHCGARIVSVLEGGYN 291
>gi|296447919|ref|ZP_06889828.1| Histone deacetylase [Methylosinus trichosporium OB3b]
gi|296254556|gb|EFH01674.1| Histone deacetylase [Methylosinus trichosporium OB3b]
Length = 310
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/271 (41%), Positives = 144/271 (53%), Gaps = 12/271 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH +Y+ +E A A +G++ ++ T T +L A G +A V
Sbjct: 51 ATREALLRVHPESYIRRIEAA---APHEGLVALDVD--TIMCPQTLDAALHAVGGAVAAV 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V R F +RPPGHHA P PMGFC F NVA AAR+A AH +RV I+D
Sbjct: 106 DEVM----RGTADTAFVGVRPPGHHAGPSTPMGFCFFNNVAAAARHALAAHAAERVAIVD 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F+ D + F STHQ YPGTG + E G D + +N PL GS
Sbjct: 162 FDVHHGNGTQDIFWSDSRVLFCSTHQAPYYPGTGAMSETGEHD---NIVNAPLWAGSTGD 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
I+P + F PDL+L+SAG+DAH DPL L+FT Y + LA
Sbjct: 219 DFLEALKTRILPRVKNFSPDLLLISAGFDAHRDDPLGGLRFTEQDYAEATKRLMDLADRS 278
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L +L S A A +G
Sbjct: 279 AGGRVVSLLEGGYDLEALGRSAAAHVLALMG 309
>gi|288936697|ref|YP_003440756.1| histone deacetylase [Klebsiella variicola At-22]
gi|288891406|gb|ADC59724.1| Histone deacetylase [Klebsiella variicola At-22]
Length = 371
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 159/303 (52%), Gaps = 27/303 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKTISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V + ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVLEGELDN----AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGY--------------NLNSLSYSVADSFRAFLGEPSKA 296
++Q A LCG + V EGGY L+ + V D F+ +
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGIRTEVQDPLLEFIQQQQPR 350
Query: 297 SEF 299
+EF
Sbjct: 351 AEF 353
>gi|443477095|ref|ZP_21066965.1| histone deacetylase superfamily [Pseudanabaena biceps PCC 7429]
gi|443017829|gb|ELS32189.1| histone deacetylase superfamily [Pseudanabaena biceps PCC 7429]
Length = 324
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/283 (40%), Positives = 153/283 (54%), Gaps = 36/283 (12%)
Query: 14 ELKNFSPASVD-----------DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 62
+L P S+D ++ H + Y+ L++ +R G I G T A+
Sbjct: 55 QLDWLEPTSIDCLNRSGVDILQEVRRFHTQEYIDALQQLTERGG--GHI----DGDTIAS 108
Query: 63 ATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
A T+ +L A A + V+ V S RP F L RPPGHHA + MGFC+FGN AI
Sbjct: 109 AQTYDVALLAVSAWLDGVNIVLDS-GRP----AFVLARPPGHHARDRSGMGFCIFGNAAI 163
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRG 182
AA A L RV I+D+DVHHGNGT DA +D PDI ++STHQ YP TG+ +E G
Sbjct: 164 AALSACDRLHLDRVAILDWDVHHGNGTQDAVWDRPDIAYISTHQSPFYPMTGRKEETG-- 221
Query: 183 DGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G+ LN+P+ SG VF+ I+P Q FKPDL++VSAG+DA+ DPLAS+
Sbjct: 222 -NHGNILNIPMRANSGIAEYLPVFNHQILPFLQEFKPDLLIVSAGFDANADDPLASILLK 280
Query: 243 T---GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
GT+ L + + +F LEGGY+ +SLS SV
Sbjct: 281 PEDFGTFTKLCLEVT--------PKILFGLEGGYDFDSLSRSV 315
>gi|397479547|ref|XP_003811075.1| PREDICTED: histone deacetylase 10 isoform 1 [Pan paniscus]
Length = 669
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|57234929|ref|YP_181077.1| histone deacetylase [Dehalococcoides ethenogenes 195]
gi|57225377|gb|AAW40434.1| histone deacetylase family protein [Dehalococcoides ethenogenes
195]
Length = 341
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/272 (36%), Positives = 147/272 (54%), Gaps = 21/272 (7%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQESLAAAGAGIALV 80
++ H R Y+S +E+ + G G T + +++ +L A G + V
Sbjct: 54 ELEGFHTRKYISRVEE----------VGFSGGGWLDQDTVISVDSYETALYAVGGVLEGV 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + F + RPPGHHA+P+ MGFC+F NVA+ A +A H LKRV ++D
Sbjct: 104 DKVLSGELES----AFVMCRPPGHHALPEASMGFCIFNNVALGALHALNKHRLKRVAVVD 159
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG +DP + ++STHQ +P TG E G + LN+PLP G GD+
Sbjct: 160 FDVHHGNGIQHVCLNDPRVTYISTHQIHHFPFTGDSCEDGPFQ---NILNIPLPAGCGDS 216
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ VF ++I P ++ P+LILV AGYDAH D + + + + + +K+ A ++
Sbjct: 217 HYQKVFDQLICPYLRKLSPELILVCAGYDAHFADDMGEMCLSQQGFAGITRALKKTADEV 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
CG + VF LEGGY+ L+ SV S L E
Sbjct: 277 CGGKMVFSLEGGYHYLGLAESVGASLAVLLDE 308
>gi|351700570|gb|EHB03489.1| Histone deacetylase 10 [Heterocephalus glaber]
Length = 724
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/313 (35%), Positives = 165/313 (52%), Gaps = 27/313 (8%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++ VH+ YV+ + + +++ L Y +TF + A GA + LV
Sbjct: 55 ATEAELGLVHSPEYVALVRRTQTLGTEELQALSGQFDAVYFHPSTFHCARLAVGAVLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V S N G AL+RPPGHH+ GFCVF NVAIAA +A+R HGL RV I
Sbjct: 115 DAVLTGGSNN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAEHAKRKHGLHRVLI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+D+HHG G F DDP + + S H+ + D VG+G G G T+NLP
Sbjct: 169 VDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPFLPESDADTVGQGQGRGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+L+SAG+D+ DP +Q T + A+
Sbjct: 229 NQVGMGNADYLAAFLHVLLPLAFEFDPELVLISAGFDSATGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ QL + L G R LEGGY+L SL+ SV + R+ LG+P P +L P A
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAQSVCMTVRSLLGDPV-------PVLL--GPMAP 335
Query: 313 VKQAIERVKHIHS 325
+ A+E ++++ +
Sbjct: 336 CQSALESIQNVRA 348
>gi|419968520|ref|ZP_14484360.1| histone deacetylase superfamily protein [Rhodococcus opacus M213]
gi|414566075|gb|EKT76928.1| histone deacetylase superfamily protein [Rhodococcus opacus M213]
Length = 374
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 1 MELTSEFRG-----SEIIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILI 53
+E+ FR + +L +P A+ ++ VH YV + +A+ G
Sbjct: 41 LEVVRRFRNLLEVSGLLDQLTKVAPRHATEAELTRVHPAEYVEEV-RALSELPMGG---- 95
Query: 54 EGSGPTYATAT--TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGP 111
EG +A F+ + AAG IA V++V + +AL+RP GHHA P
Sbjct: 96 EGKSSVFAPVPRGAFEIASLAAGGAIAAVEAVVNGEVDN----AYALLRPAGHHAEPDRS 151
Query: 112 MGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY- 170
MGFC+F N AIAAR+ G+ RV +ID+DVHHGNGT + YDDP +S HQD +
Sbjct: 152 MGFCIFSNAAIAARHLLDECGVNRVALIDWDVHHGNGTQASLYDDPRALTISVHQDRLFP 211
Query: 171 PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
P G +D++G G EG+ LN+PLP G A V+ V++P + F+P++I+V +G+DA
Sbjct: 212 PDDGFVDQIGVGAAEGTNLNIPLPAGCTSAAYNEVYDRVVIPALETFRPEIIIVPSGFDA 271
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
+DP+ + + Y L + + A DLCG R VF EGGY
Sbjct: 272 GHMDPMGRMLMHSQGYRELTRKLMKAADDLCGGRMVFLHEGGY 314
>gi|374293692|ref|YP_005040715.1| putative deacetylase [Azospirillum lipoferum 4B]
gi|357427095|emb|CBS90033.1| putative deacetylase [Azospirillum lipoferum 4B]
Length = 309
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/179 (48%), Positives = 109/179 (60%), Gaps = 3/179 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA MGFC+F N A+ A +A+ AHGL+RV ++DFDVHHGNGT D
Sbjct: 116 FCAVRPPGHHAERDKAMGFCLFNNAAVGAYHARAAHGLQRVAVMDFDVHHGNGTQDILQH 175
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DPD+ + STHQ YPGTG E G G+ +N PLP +G R VI+P
Sbjct: 176 DPDMLYCSTHQSPLYPGTGDAGEKGE---YGNCVNAPLPAMAGSPEFRHAMTHVILPAID 232
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
FKPDL+++SAG+DAH DPLA L + + +LA+ CG+R V LEGGYN
Sbjct: 233 HFKPDLLIISAGFDAHSRDPLAGLHLIDDDFVWATRKLGELARTHCGARIVSVLEGGYN 291
>gi|114687051|ref|XP_515218.2| PREDICTED: histone deacetylase 10 isoform 2 [Pan troglodytes]
gi|410211908|gb|JAA03173.1| histone deacetylase 10 [Pan troglodytes]
Length = 669
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|410250972|gb|JAA13453.1| histone deacetylase 10 [Pan troglodytes]
gi|410305904|gb|JAA31552.1| histone deacetylase 10 [Pan troglodytes]
gi|410337563|gb|JAA37728.1| histone deacetylase 10 [Pan troglodytes]
Length = 669
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|328699049|ref|XP_001942623.2| PREDICTED: histone deacetylase 6-like [Acyrthosiphon pisum]
Length = 839
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 166/319 (52%), Gaps = 24/319 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
I+ +N A+ D++ H+++ + L+ D S + + Y +T+++SL
Sbjct: 100 IQCRN---ATNDELLMKHSQSIIDILKSTDDIQSVDLLQTLSSKFDAIYFHPSTYKQSLL 156
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G+ I LV ++ +K + G A IRPPGHHA+ G+C F N+AI A Y R +
Sbjct: 157 ATGSSIELVKAICENKIQN----GMAFIRPPGHHAMKSEFCGYCFFNNIAITAEYVLRHY 212
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEG 186
+ ++ I+D+DVHHG T FYDDP + + S H + G +P D G GDG+G
Sbjct: 213 SVSKILIVDWDVHHGQSTQQMFYDDPRVLYFSIHRYEHGQFWPNLRESDWDYTGNGDGQG 272
Query: 187 STLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
+N+PL G DT +FH++++P A F+PDLIL+S+GYDA + P ++ T
Sbjct: 273 FNINVPLNATGMRDTDYLAIFHQILLPVASEFQPDLILISSGYDAALGCPEGEMEVTPAC 332
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL 305
Y L ++ A CG R LEGGY L SL+ A + ++ LG+P + + +
Sbjct: 333 YAHLVHSLMGFA---CG-RVAVLLEGGYCLKSLAEGAALTLKSLLGDPCPSLD------M 382
Query: 306 YEEPSAKVKQAIERVKHIH 324
P + Q I+ V H
Sbjct: 383 TSNPCTSIIQTIQNVIFAH 401
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/275 (38%), Positives = 153/275 (55%), Gaps = 26/275 (9%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
Y T T++ S A+G + +VDSV +++ G A+IRPPGHHA GFC+F
Sbjct: 558 VYLTTDTYKVSTLASGCLLQVVDSVMKNESAS----GVAVIRPPGHHAELDIACGFCIFN 613
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-----P 171
+VAIAA YA +GLKR+ I+D+D+H GNGT AF DP + ++S H Q+ +
Sbjct: 614 SVAIAASYALNKYGLKRIMILDWDIHFGNGTMRAFSSDPRVLYISIHRYQNAKFFPCSEE 673
Query: 172 GTGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
G+ K+ G G GEG T+N+P G GD +V +I+P A F P+L+LVSAG+DA
Sbjct: 674 GSHKV--TGSGSGEGYTINIPWNKNGMGDAEYISVMQNIILPVAYEFCPELVLVSAGFDA 731
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
V DPL + T Y L + LA + + LEGGYN++++SY + +A L
Sbjct: 732 AVGDPLGGCKVTPECYGHLTHFLSSLA----NGKIILALEGGYNIDAVSYCMTMCTKALL 787
Query: 291 GEPSKASEFDNPAILYEEPSAK-VKQAIERVKHIH 324
G+P P + E P K ++ I+RV ++
Sbjct: 788 GDPL-------PPLDLEFPICKNAQKTIKRVVNVQ 815
>gi|322785610|gb|EFZ12265.1| hypothetical protein SINV_07643 [Solenopsis invicta]
Length = 1170
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 154/279 (55%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+++++A VH++ Y+ +++ ++ Y T+ + + G+ + +V
Sbjct: 582 ATIEELALVHSKDYIDDIKQTSTLKLKELDKQASDYNSVYLHTETWSSACMSTGSLLQVV 641
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + + G A++RPPGHHA GFC+F NVA+AA YA + H +KRV IID
Sbjct: 642 DAVLNGECQS----GVAIVRPPGHHAEKDNACGFCIFNNVAVAAMYAVQFHLVKRVLIID 697
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGTGKI---DEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +DP I ++S H+ +GS+ KI VG GEG +N+P
Sbjct: 698 WDVHHGNGTQSIFEEDPRILYVSVHRYDNGSFFPNSKIANYTNVGLNAGEGFNVNIPWNK 757
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F +V++P A +F P+L+LVSAG+DA + D L + Y L +
Sbjct: 758 KGMGDAEYIAAFQQVVMPIAYQFNPELVLVSAGFDACIGDTLGGCLVSPELYGHLTHWLS 817
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
LA R + LEGGYN+NS+S+++ + LG+P
Sbjct: 818 SLA----NGRIILSLEGGYNINSISHAMTMCTKTLLGDP 852
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 140/271 (51%), Gaps = 20/271 (7%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +T++ SL A G+ LV+SV + + G A+IRPPGHHA+ G+C F N
Sbjct: 194 YIHPSTYRLSLLAVGSTTNLVESVCKGEIQN----GMAIIRPPGHHAMKSEYCGYCFFNN 249
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKI 176
VA+AA A + R+ I+D+DVHHG T FY+DP + + S H + G +P +
Sbjct: 250 VALAAEKALSSGLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGEFWPNLRES 309
Query: 177 D--EVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
D VG GEG N+PL G + +F +V++P A F+PDLI+VSAGYDA +
Sbjct: 310 DFHYVGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIVSAGYDAALG 369
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
P + T Y L +++ LA + LEGGY L SL+ A + R LG+P
Sbjct: 370 CPEGEMLITPACYSHLLSSLLSLA----NGKVAVILEGGYCLKSLAEGAALTLRTLLGDP 425
Query: 294 SKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
+ + PS +++ I V + H
Sbjct: 426 CPILQ------TLDLPSLSIRETILNVIYAH 450
>gi|171320817|ref|ZP_02909822.1| histone deacetylase superfamily [Burkholderia ambifaria MEX-5]
gi|171093939|gb|EDT39055.1| histone deacetylase superfamily [Burkholderia ambifaria MEX-5]
Length = 369
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 146/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLA 71
++++ +PA+ D+ +H Y+ D G + G G +++ +
Sbjct: 61 LDMRGAAPATPGDLLRIHPAGYLDAFRALSDAHGGDLGDLAPFGKG-------SYEIAAL 113
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG IA +D+V A F+L RPPGHH + PMGFC+ N+ +A A+ H
Sbjct: 114 SAGLAIAAIDTVVAEHAVN----AFSLSRPPGHHCLRDRPMGFCLLANIPVAIEAARAKH 169
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLN 190
G+ RV +ID+DVHHGNGT +YDDPD +S HQD + PG + G G G G+ LN
Sbjct: 170 GIGRVAVIDWDVHHGNGTQSIYYDDPDTLTISLHQDRCFPPGYSGGGDRGEGAGVGANLN 229
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL GSGD A R F ++VP +RF+P+LI+V++G DA +DPLA + T +Y +
Sbjct: 230 VPLLAGSGDDAYRYAFERIVVPALERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMT 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+K A+ CG R V EGGY+
Sbjct: 290 RAVKDAAQRHCGGRLVIVHEGGYS 313
>gi|335423408|ref|ZP_08552430.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
gi|334891989|gb|EGM30234.1| histone deacetylase superfamily protein [Salinisphaera shabanensis
E1L3A]
Length = 368
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 106/268 (39%), Positives = 156/268 (58%), Gaps = 13/268 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ + PA+ + ++ VH +Y LE + +Q + ++ T +A + + + A
Sbjct: 72 VRITTGQPATREQLSRVHTTSY---LENLHELEGKQAWLDVD---TTAVSAGSLEAAEVA 125
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG+ IA VD+V K + F + RPPGHHA GFC+F N+A+AA +AQ
Sbjct: 126 AGSTIAAVDAVFEKKVQS----AFVICRPPGHHANAVRARGFCLFNNIAVAAAHAQFQWD 181
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNL 191
++RV IID+D HHGNGT D F DP + F TH+ YPGTG ++E+G G GEG+T+N+
Sbjct: 182 IERVLIIDWDAHHGNGTQDIFDADPSVMFFDTHRAAPFYPGTGDMEEIGEGLGEGTTVNV 241
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP +GD A+ F ++VP + FKP+LILVSAG DAH + L + Y +A
Sbjct: 242 PLPEDAGDLAIINAFENILVPAVEWFKPELILVSAGMDAHRTE--LCLNMSYDGYSAMAG 299
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLS 279
+++LA C R V LEGGYN ++L+
Sbjct: 300 IVQRLADQYCDGRLVMALEGGYNPDTLA 327
>gi|325292130|ref|YP_004277994.1| histone deacetylase [Agrobacterium sp. H13-3]
gi|325059983|gb|ADY63674.1| histone deacetylase family protein [Agrobacterium sp. H13-3]
Length = 311
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 126/227 (55%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA + VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYVSPKSLQAALTGIGAAMVAVDDVFTGAADNV------FVASRPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F N AIAAR+AQ+ HG +RV IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNAAIAARHAQKVHGAERVAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLI++SAG+DAH DPL
Sbjct: 199 NETGV---KNNVVNAPLSPNTGSEYFREAFKSRVLPAISDFSPDLIIISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAA 302
>gi|426394917|ref|XP_004063729.1| PREDICTED: histone deacetylase 10 isoform 1 [Gorilla gorilla
gorilla]
Length = 669
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|336249159|ref|YP_004592869.1| putative deacetylase [Enterobacter aerogenes KCTC 2190]
gi|334735215|gb|AEG97590.1| putative deacetylase [Enterobacter aerogenes KCTC 2190]
Length = 371
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 168/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+EL++ + AS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LELRSAAAASLEDLRRIHPDSYLKRFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKALL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYSGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+V+ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIVACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGVRTEVQDPLLEFIQQQQPR 350
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 351 AAFAQFQRQAIDRL 364
>gi|167644523|ref|YP_001682186.1| histone deacetylase superfamily protein [Caulobacter sp. K31]
gi|167346953|gb|ABZ69688.1| histone deacetylase superfamily [Caulobacter sp. K31]
Length = 379
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 5/216 (2%)
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
F+ + AAG IA VD+V + + +AL+RP GHH+ P MGFC+F N AIA R
Sbjct: 107 FEIASLAAGGAIAAVDAVMSGEVDN----AYALLRPAGHHSRPDRSMGFCIFSNAAIAGR 162
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDG 184
+ H +KR+ +D+DVHHGNGT A Y++P +S HQD YP G +D++G G
Sbjct: 163 HLLDFHNVKRIAYVDWDVHHGNGTQAALYNEPRALTISIHQDRLYPVDDGFVDQIGEGAA 222
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
EG+ LN+PLP G G A + V++P Q F+P++I+V +G+DA +DP+ + +
Sbjct: 223 EGTNLNIPLPPGCGAEAYCAAYDRVVIPALQAFRPEIIIVPSGFDAGAMDPMGRMMMHSD 282
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSY 280
Y L + A +LCG R VF EGGY+ ++ Y
Sbjct: 283 GYRQLTRKLMATADELCGGRLVFLHEGGYSRWTVPY 318
>gi|296118475|ref|ZP_06837053.1| histone deacetylase family protein [Corynebacterium ammoniagenes
DSM 20306]
gi|295968374|gb|EFG81621.1| histone deacetylase family protein [Corynebacterium ammoniagenes
DSM 20306]
Length = 374
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 150/265 (56%), Gaps = 13/265 (4%)
Query: 14 ELKNFS--PASVDDIASVHARAYVSGLEKAMDRASQ-QGIILIEGSGPTYATATTFQESL 70
+L N PAS +D+ VH ++ E D++SQ +G +G+ P ++ L
Sbjct: 60 QLTNLQAQPASEEDLLRVHTAEHI---EYIKDQSSQPKGGDAGDGASPLGKGG--YEIGL 114
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAG I SV + +ALI PPGHHA + MGFC+F N ++AA YA+
Sbjct: 115 LAAGGAIQATKSVLTGEVD----TAYALINPPGHHAERERGMGFCLFNNASVAAAYAKEH 170
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTL 189
HGL RV ++D+DVHHGNGT ++D+PD+ +S HQ+ +P +G ++ G D G+ L
Sbjct: 171 HGLTRVAVVDWDVHHGNGTQQIWWDNPDVLTISLHQNKCFPANSGFREDNGGPDALGTAL 230
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP GSG+ F EV++P + F+P+LI+V++G+DA +DPLA T + +
Sbjct: 231 NIPLPPGSGNAVYNLAFEEVVLPALEAFQPELIIVASGFDASAMDPLARQMVTQDGFKQM 290
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYN 274
I A +C + VF EGGY+
Sbjct: 291 TEMIVSAADSICDGKLVFVQEGGYS 315
>gi|427417461|ref|ZP_18907644.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
gi|425760174|gb|EKV01027.1| deacetylase, histone deacetylase/acetoin utilization protein
[Leptolyngbya sp. PCC 7375]
Length = 316
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 155/280 (55%), Gaps = 20/280 (7%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E +E + +P +D I +VH AYV L++ +R + ++ P +A ++Q +L
Sbjct: 49 EWVEPCDRNP--LDWINAVHDPAYVLTLQRIAERGGGR----LDADTPV--SAASYQIAL 100
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
A A + VD V ++ GF L RPPGHHA MGFC+ NVAIAARYA
Sbjct: 101 LAVSAWLDGVDYVTDNQGAS----GFVLARPPGHHAEYSQGMGFCLLSNVAIAARYALEK 156
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
G+ RV I+D+DVHHGNGT + I + S HQ +YPGTG+ E G G+ LN
Sbjct: 157 PGIDRVAILDWDVHHGNGTQQLVSNQRQIVYCSLHQMPAYPGTGQAGETGM---HGNVLN 213
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+P+ GS + F + +VP Q+F+PDL+LVSAGYDA+ DPLA + Y LA
Sbjct: 214 IPMASGSTVKDYKHRFEQQVVPFFQQFQPDLLLVSAGYDANASDPLAGIDLMPADYGFLA 273
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
A ++A R +F LEGGY+ +LS SV + A L
Sbjct: 274 AACHKVAP-----RVLFGLEGGYDYQALSQSVIATIEAVL 308
>gi|20070354|ref|NP_114408.3| histone deacetylase 10 isoform 1 [Homo sapiens]
gi|27734403|sp|Q969S8.1|HDA10_HUMAN RecName: Full=Histone deacetylase 10; Short=HD10
gi|15082078|gb|AAK84023.1|AF393962_1 histone deacetylase 10 isoform b [Homo sapiens]
gi|16903566|gb|AAL30513.1|AF426160_1 histone deacetylase 10 [Homo sapiens]
gi|47678461|emb|CAG30351.1| dJ402G11.7 [Homo sapiens]
gi|109451170|emb|CAK54446.1| HDAC10 [synthetic construct]
gi|109451748|emb|CAK54745.1| HDAC10 [synthetic construct]
gi|115527737|gb|AAI25084.1| Histone deacetylase 10 [Homo sapiens]
gi|119593924|gb|EAW73518.1| histone deacetylase 10, isoform CRA_h [Homo sapiens]
gi|208967873|dbj|BAG72582.1| histone deacetylase 10 [synthetic construct]
Length = 669
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|385304056|gb|EIF48091.1| histone deacetylase hda1 [Dekkera bruxellensis AWRI1499]
Length = 718
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 167/315 (53%), Gaps = 25/315 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ +I +VH R ++ ++K +Q + + Y ++ + A+G I
Sbjct: 112 PATDAEILAVHTREHLEFIKKTTTMTKEQLLHETDVGDSVYFNNDSYSSAKLASGGAIEA 171
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVF 137
+V + + A++RPPGHHA P P GFC+F NVA+AAR + + ++++
Sbjct: 172 CKAVVEGRVKN----ALAVVRPPGHHAEPDAPGGFCLFSNVAVAARAILKNYPESVRKIA 227
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYPGT--GKIDEVGRGDGEGSTLNLP 192
I+D+DVHHGNGT AF++DP + ++S H Q YPGT G D+VG G G G +N+P
Sbjct: 228 IVDWDVHHGNGTQKAFFNDPRVLYMSLHRYEQGKYYPGTPAGGADQVGEGAGVGFNVNVP 287
Query: 193 LP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P GG GD F +VI+P FKPD ++VS+G+DA DP+ + Y +
Sbjct: 288 WPTGGMGDAEYIYAFRKVIMPILYEFKPDFLIVSSGFDAAEGDPIGGCHVSPSGYSQMTH 347
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE-PS 310
+K +A+ G+ CV LEGGYNL+++S S + LGE P +L + P
Sbjct: 348 YMKTIAQ---GNICV-VLEGGYNLDAISVSALRVAKVLLGEA--------PEVLQQSLPR 395
Query: 311 AKVKQAIERVKHIHS 325
+ QA+ V + S
Sbjct: 396 PEAVQAVSDVIKVQS 410
>gi|421480720|ref|ZP_15928322.1| histone deacetylase family protein [Burkholderia multivorans CF2]
gi|400220527|gb|EJO51055.1| histone deacetylase family protein [Burkholderia multivorans CF2]
Length = 373
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/180 (46%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + MGFC+ N+ IA A+ HG+ RV +ID+DVHHGNGT +YD
Sbjct: 134 FSLSRPPGHHCLRDRSMGFCLLANIPIAIEAARAKHGIGRVAVIDWDVHHGNGTQSIYYD 193
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DPD +S HQD + PG G ++ G G G G+ LN+PL GSGD A R F +++P
Sbjct: 194 DPDTLTISLHQDRCFPPGYGGAEDRGAGAGVGANLNVPLLAGSGDDAYRHAFERIVLPAL 253
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+RF+P+LI+V++G DA +DPLA + T +Y + +K+ A+ CG R V EGGY+
Sbjct: 254 ERFRPELIVVASGLDASAVDPLARMLLHTDSYRFMTRAVKEAAQRHCGGRLVIVHEGGYS 313
>gi|372272040|ref|ZP_09508088.1| histone deacetylase superfamily protein [Marinobacterium stanieri
S30]
Length = 371
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 19/270 (7%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT----T 65
S+ +++ + A+ +D+ VH + Y+ + D G GP A T
Sbjct: 58 SQSLQVSSAPVATQEDLLRVHPQTYLERFKALSDN----------GGGPFGDNAPVGPGT 107
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
F+ +L +AG V+ V R + +AL RPPGHH +P MGFC N+ +A
Sbjct: 108 FEIALKSAGLVCTAVEKVM----RGEADNAYALSRPPGHHCLPDQAMGFCFLANIPVAIE 163
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDG 184
A+ L+RV +ID+DVHHGNGT +YD PD+ +S HQ+G + PG ++ G G G
Sbjct: 164 RAKAMFNLERVAVIDWDVHHGNGTQAVYYDRPDVLSISIHQEGCFPPGYSGAEDRGEGAG 223
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
EG LN+PL GSG A F E++ P +++KP LI+V+ GYDA+ +DPLA + +
Sbjct: 224 EGCNLNIPLLPGSGHEAYMHAFDELVTPALRQYKPQLIIVACGYDANGIDPLARMLAHSD 283
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
T+ + K LA++LC R V EGGY+
Sbjct: 284 TFRQMTEKTKALAEELCDGRLVLAHEGGYS 313
>gi|15213865|gb|AAK92205.1|AF407272_1 histone deacetylase 10 isoform alpha [Homo sapiens]
Length = 669
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|418406288|ref|ZP_12979607.1| histone deacetylase family protein [Agrobacterium tumefaciens 5A]
gi|358006781|gb|EHJ99104.1| histone deacetylase family protein [Agrobacterium tumefaciens 5A]
Length = 311
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 126/227 (55%), Gaps = 11/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
TY + + Q +L GA + VD V A+ N F RPPGHHA MGFC+
Sbjct: 85 TYVSPKSLQAALTGIGAAMVAVDDVFTGAADNV------FVASRPPGHHAETAKAMGFCL 138
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKI 176
F N AIAAR+AQ+ HG +RV IID+DVHHGNGT D F++D + F STHQ YP +G
Sbjct: 139 FNNAAIAARHAQKVHGAERVAIIDWDVHHGNGTQDIFWNDTSVLFCSTHQMPLYPWSGDK 198
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+E G + + +N PL +G R F ++P F PDLI++SAG+DAH DPL
Sbjct: 199 NETGV---KNNVVNAPLSPNTGSEYFREAFKSRVLPAIADFSPDLIIISAGFDAHHRDPL 255
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVA 283
A + + + ++A +R V LEGGY+L L+ S A
Sbjct: 256 AQINLVGEDFDWATGRLLEMADKYASNRVVSLLEGGYDLEGLAESAA 302
>gi|119593921|gb|EAW73515.1| histone deacetylase 10, isoform CRA_e [Homo sapiens]
Length = 673
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|257386631|ref|YP_003176404.1| histone deacetylase superfamily protein [Halomicrobium mukohataei
DSM 12286]
gi|257168938|gb|ACV46697.1| histone deacetylase superfamily [Halomicrobium mukohataei DSM
12286]
Length = 335
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 140/239 (58%), Gaps = 7/239 (2%)
Query: 59 TYATATTFQESLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
T A T++ +LA+AG A A + ++ R P FAL RPPGHHA+ MGFC
Sbjct: 78 TVAVEDTWKAALASAGLAEWAALSALDGDDGRETP---FALGRPPGHHAVADDAMGFCFV 134
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKID 177
N +AA+ A G V I D+DVHHGNGT D YD DIF+ S H++G YPGTG++D
Sbjct: 135 DNAVVAAQSALD-EGADGVAIFDWDVHHGNGTQDICYDRDDIFYASIHEEGLYPGTGEVD 193
Query: 178 EVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
E G GDG TLN+P G+ E+I P + F PDL+LVSAG+DAH DP++
Sbjct: 194 ETGTGDGAMRTLNVPYDPGADTVDYLAAVDELIAPEIESFDPDLLLVSAGFDAHRHDPIS 253
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EPSK 295
++ ++ Y +L ++ L D C + F LEGGY+L++L+ S+ F G +PS+
Sbjct: 254 RMRVSSEGYGLLTQRMRDL-TDRCDAGLGFVLEGGYSLDTLTDSLTTVHEVFDGYQPSQ 311
>gi|260577314|ref|ZP_05845287.1| histone deacetylase superfamily [Rhodobacter sp. SW2]
gi|259020495|gb|EEW23818.1| histone deacetylase superfamily [Rhodobacter sp. SW2]
Length = 308
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/249 (40%), Positives = 136/249 (54%), Gaps = 13/249 (5%)
Query: 39 EKAMDRASQQ--GIILIEGSGPTYATATTFQESLAAAGAGIALVDSV--AASKNRPDPPL 94
++ +DR Q + + G TY + + + GA A VD V + N
Sbjct: 58 QRHIDRVRQSLPALGWAQIDGDTYLSPGSLTAARRGVGAACAAVDLVLGGGAAN------ 111
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F RPPGHHA + MGF +F ++AIAA A HGL RV I+DFDVHHGNGT +
Sbjct: 112 AFTATRPPGHHAEAETAMGFFLFNSIAIAAIRALEVHGLSRVAIVDFDVHHGNGTQALLW 171
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
D+P + F S+ Q YPG+G E G +G +N+PL G+G MR + + P
Sbjct: 172 DEPRVLFASSQQMPLYPGSGAASETG---AQGQIVNVPLRAGTGGAEMRAAYAAQVFPRI 228
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F+P+LIL+SAG+DAH DPLA L + Y L I LA+ +C R V LEGGY+
Sbjct: 229 EAFQPELILLSAGFDAHACDPLAGLNWREADYQALTGRICDLAEQICDRRVVSVLEGGYD 288
Query: 275 LNSLSYSVA 283
L +L+ SVA
Sbjct: 289 LPALAASVA 297
>gi|448354158|ref|ZP_21542922.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
gi|445638555|gb|ELY91682.1| histone deacetylase [Natrialba hulunbeirensis JCM 10989]
Length = 372
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 157/319 (49%), Gaps = 18/319 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ L + PA+ + H ++ L+ A G I E T A TF+ + A
Sbjct: 59 VTLADVEPATRVQLERTHTADHIDDLQAFC--ADGGGRITAE----TGANEHTFRAATHA 112
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AGA + + P + +A++RP GHHA P+ GFC F NVA+AA +
Sbjct: 113 AGATCLAAEHALET---PSDNVPYAMVRPSGHHAQPEQVDGFCYFNNVAVAADHVLETTD 169
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD------GSYPGTGKIDEVGRGDGEG 186
+RV I+D+DVHHGNGT + F D D+ + H D ++P TG +DEVG GDGEG
Sbjct: 170 TERVAIVDWDVHHGNGTQECFEDRDDVLVIGIHNDHWSWDPEAHPQTGDLDEVGTGDGEG 229
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+N+PLP G+GD VF ++ P + + PDL+L+SAG DA +DPL T G +
Sbjct: 230 YNVNVPLPPGTGDEGYEHVFDRIVEPLLRSYDPDLLLISAGQDAGTMDPLGRNVVTKGGF 289
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY 306
L + LA + EGGY ++ L+Y+ LG + D+P
Sbjct: 290 EELGRRARVLADEYADGNLAVVQEGGYQVSHLAYATLGVLEGVLGVETG---IDDPMAWM 346
Query: 307 EEPSAKVKQAIERVKHIHS 325
+E ++AIE + HS
Sbjct: 347 DEDYDSAQRAIEDIAAYHS 365
>gi|374623885|ref|ZP_09696380.1| histone deacetylase superfamily protein [Ectothiorhodospira sp.
PHS-1]
gi|373942981|gb|EHQ53526.1| histone deacetylase superfamily protein [Ectothiorhodospira sp.
PHS-1]
Length = 314
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 145/274 (52%), Gaps = 14/274 (5%)
Query: 9 GSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQE 68
G +I L+ P + + + VHA Y+ +E ++ Q ++ +G TY + +
Sbjct: 40 GRRVIRLEA-RPVTREQLERVHAPEYLDLVEASVPPPGQWDML---DTGDTYLCEHSLEA 95
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ AAGA + VD V + F +RPPGHHA + MGFC+F NVA+ A +A
Sbjct: 96 ARLAAGAVVTAVDRVMGTPGS----TAFCSVRPPGHHAGRRFGMGFCLFNNVAVGAAHAM 151
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
HGL RV I+DFDVHHGNGT D F +P + S+ Q YPGTG R D
Sbjct: 152 AIHGLTRVAIVDFDVHHGNGTEDIFRHEPRVLLCSSFQHPLYPGTGADT---RSD---HI 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LNLPL G+ A+R+ +P + F P L++VSAG+DAHV DPLAS + Y
Sbjct: 206 LNLPLHAGTDGPALRSAMKARWLPVLEDFAPQLVMVSAGFDAHVDDPLASFRLVEADYVE 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
L I LA+ R V LEGGY+L +L SV
Sbjct: 266 LTEMIMDLARRYGRGRVVSVLEGGYDLPALGRSV 299
>gi|254281832|ref|ZP_04956800.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
gi|219678035|gb|EED34384.1| histone deacetylase superfamily protein [gamma proteobacterium
NOR51-B]
Length = 370
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/271 (38%), Positives = 153/271 (56%), Gaps = 15/271 (5%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLE-KAMDRASQQGIILIEGSGPTYATATTFQESL 70
+LK+ P AS +D+ H +V+ ++ K A G + G G +++ +
Sbjct: 59 QLKSIVPRKASFEDLTRAHTSKHVTDVKVKNEQGARDAGNLAPLGQG-------SYEIAC 111
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
+AG + +D++ + D +AL+RPPGHHA MGFC+F N A+AARYAQ
Sbjct: 112 LSAGGLLTALDAIKSG----DIKNAYALVRPPGHHAEADLSMGFCIFNNGAVAARYAQSV 167
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTL 189
G K++ IID+DVHHGNGT F+DDP + +S HQD + P +G I + G G G G L
Sbjct: 168 LGYKKIAIIDWDVHHGNGTQAIFWDDPSVLTVSLHQDRCFPPDSGYIQDNGGGAGAGFNL 227
Query: 190 NLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
N+PLP GSG A + V +P +RFKPDLI V+ GYDA DP+A ++ T+ +
Sbjct: 228 NVPLPPGSGRGAYLSALERVALPAIERFKPDLIFVACGYDAGAFDPMARQMLSSDTFGEM 287
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSY 280
A +K A LC R + + EGGY+ ++ Y
Sbjct: 288 TALVKGTASRLCEGRMLLYHEGGYHAETVPY 318
>gi|240280940|gb|EER44443.1| histone deacetylase hda1 [Ajellomyces capsulatus H143]
Length = 781
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 160/311 (51%), Gaps = 26/311 (8%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH + ++ ++ I L Y + TF ++ + G I
Sbjct: 196 ATEEEISLVHDAEHYDFVQSTKFMLEEELIALEHTRDSIYFNSLTFTSAVLSCGGAIETC 255
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+V + + A+IRPPGHHA MGFC+F NV +AA+ Q+ G +++ I
Sbjct: 256 MAVVDRQVKN----AIAVIRPPGHHAERNKTMGFCLFNNVCVAAKVCQKEFGDKCRKILI 311
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP+I ++S H +DGS YPG G D G G G G +N+P
Sbjct: 312 LDWDVHHGNGIQKAFYDDPNILYISIHVYRDGSFYPGGEGGNWDRCGAGSGLGKNINIPW 371
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P A F PDL+++SAG+DA D L T Y A+
Sbjct: 372 PTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----AH 427
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ ++ +L G + LEGGYN S+S S R +GEP P LY S+
Sbjct: 428 MTRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEP--------PDRLYA--SSA 477
Query: 313 VKQAIERVKHI 323
+QA+ VK +
Sbjct: 478 SRQAVNTVKRV 488
>gi|262277958|ref|ZP_06055751.1| histone deacetylase 14 [alpha proteobacterium HIMB114]
gi|262225061|gb|EEY75520.1| histone deacetylase 14 [alpha proteobacterium HIMB114]
Length = 307
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 154/280 (55%), Gaps = 17/280 (6%)
Query: 14 ELKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+++ F P D I VH + Y LEK + GI ++G T + + + +L
Sbjct: 40 QIRWFEPKLFDHTIIEKVHKKNY---LEKISISFPKNGIQFLDGD--TIVSPGSKEAALD 94
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G+ I +D V + + F +RPPGHHA MGFC++ NVA+ A Y +
Sbjct: 95 AVGSIILGIDQVVNKEFKN----TFCSVRPPGHHAESDKAMGFCIYNNVAVGAAYLLHYY 150
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
K+V IID+DVHHGNGT + FY++ ++ ++STHQ YPGTG ++E G + LN+
Sbjct: 151 QYKKVAIIDYDVHHGNGTQEIFYNNSNVLYISTHQYPFYPGTGSVNEKG---ASNNILNI 207
Query: 192 PL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
PL PG S D + E ++ + F P+ IL+S+G+DAH DPLA + + +Y +
Sbjct: 208 PLDPGTSSDIYFNSF--ENVLKKLKSFNPEFILLSSGFDAHQKDPLAQVNLKSKDFYEIT 265
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
I +A ++C R V LEGGY+L++L S + +A +
Sbjct: 266 KRIMNVADNICDGRIVSILEGGYDLDALKESAYEHVKALI 305
>gi|37526255|ref|NP_929599.1| hypothetical protein plu2353 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785685|emb|CAE14646.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 370
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 22/274 (8%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIA 78
P + +H Y+ ++ D G++ IE S GP SLA A
Sbjct: 69 PIDEQTLRKIHPEEYLKQFKRVSDNGG--GMLGIEASLGPGSYEIAKLSASLACAAVEAV 126
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
L + + ++L RPPGHH +P PMGFC N+ +A A+ LKRV +
Sbjct: 127 LSGELDNA---------YSLSRPPGHHCLPDKPMGFCFLANIPLAIEQAKARFDLKRVAV 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGS 197
ID+DVHHGNGT ++D D+ +S HQDG + PG D++G G+G G LN+PL G+
Sbjct: 178 IDWDVHHGNGTQHIYWDRSDVLTISIHQDGCFPPGYSGEDDIGEGEGTGYNLNIPLLAGA 237
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G + ++++P +RFKP+LI+V+ GYDA+ +DPLA +Q + ++ + ++Q A
Sbjct: 238 GHNSYIYAMTQIVLPALERFKPELIIVACGYDANAMDPLARMQLHSESFREMTQLVQQAA 297
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
LC + V EGGY A+S+ F G
Sbjct: 298 DSLCDGKLVVVHEGGY---------AESYVPFCG 322
>gi|346229412|gb|AEO21835.1| propanil hydrolase [Sphingomonas sp. Y57]
Length = 369
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 139/257 (54%), Gaps = 11/257 (4%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
P +V+D +H Y+ ++A D +L S F+ +L +AG A
Sbjct: 67 EPVTVEDCLRIHPADYIRRFKEASDAGGGDLGMLAPFS------KGGFEIALMSAGLARA 120
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
+D V K R +AL RP GHH +P PMGFC+ N+ IA A+ HG++RV +
Sbjct: 121 AIDDVLTGKVRN----AYALSRPAGHHCLPDTPMGFCLLANIPIAIEAARARHGIERVAV 176
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGS 197
+D+DVHHGNGT +YD D+ +S HQD + PG ++E G G G G +N+PLP GS
Sbjct: 177 VDWDVHHGNGTQACYYDRSDVLTISVHQDRCFPPGYSGVEERGEGAGLGHNINIPLPAGS 236
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G F +++P R++PDLI+V++G DA+ +DPLA + + +Y +L + A
Sbjct: 237 GQDTYVHAFETIVLPALDRYRPDLIVVASGLDANAVDPLARMLLFSESYRVLTGMMMDAA 296
Query: 258 KDLCGSRCVFFLEGGYN 274
LC R EGGY+
Sbjct: 297 DRLCEGRLAVVHEGGYS 313
>gi|237746704|ref|ZP_04577184.1| deacetylase [Oxalobacter formigenes HOxBLS]
gi|229378055|gb|EEO28146.1| deacetylase [Oxalobacter formigenes HOxBLS]
Length = 311
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/289 (37%), Positives = 151/289 (52%), Gaps = 14/289 (4%)
Query: 4 TSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
T EF E I ++ + + + VH YV +E + G + ++G G T +
Sbjct: 37 TPEF---ESIPWRHAPLGTKEQLLLVHTPEYVRRIETIRPKV---GYVPLDG-GDTIMSP 89
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
T+ ++ GA VD V K D F RP GHHA P MGFCVF + AI
Sbjct: 90 GTWDCVMSCVGAACLGVDMVM--KGEADNV--FCATRPCGHHAEPDRAMGFCVFNHAAIG 145
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
A YA + L RV I+DFDVHHGNGT DAFY P+IF+ S HQ YPG+G E G
Sbjct: 146 AAYAYDKYKLDRVAIVDFDVHHGNGTQDAFYHRPEIFYASCHQSPFYPGSGARYETGI-- 203
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
+ + +N+PL G+G R I+P ++F P ++++SAG+DAH DPL L FT
Sbjct: 204 -DHNVVNVPLSRGAGSDKFRNCMSFEILPALKKFNPSILIISAGFDAHRKDPLGGLSFTD 262
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+Y + + ++A + C + V LEGGY+L L+ A RA +G
Sbjct: 263 DDFYWVTKELMKVADECCDGKIVSILEGGYSLEGLASGSAAHVRALMGN 311
>gi|291449725|ref|ZP_06589115.1| histone deacetylase-like amidohydrolase [Streptomyces albus J1074]
gi|421743543|ref|ZP_16181600.1| deacetylase, histone deacetylase/acetoin utilization protein
[Streptomyces sp. SM8]
gi|291352674|gb|EFE79576.1| histone deacetylase-like amidohydrolase [Streptomyces albus J1074]
gi|406688034|gb|EKC91998.1| deacetylase, histone deacetylase/acetoin utilization protein
[Streptomyces sp. SM8]
Length = 382
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 131/205 (63%), Gaps = 2/205 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+ L+RPPGHHA P M C++ N+A+AAR AQR HG++RV ++D+DVHHGNG FYD
Sbjct: 133 YCLVRPPGHHAEPDRAMALCLYNNLAVAARAAQR-HGVRRVLVLDWDVHHGNGLQRVFYD 191
Query: 156 DPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DPD+ ++S HQDG +P +G++ E G G G G TLN+PLP GSG A +V+ P A
Sbjct: 192 DPDVLYISLHQDGLFPAASGRVLETGTGKGTGRTLNVPLPAGSGHGAYLAALDQVVEPAA 251
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F+P+LILV+AG DA DP+ + T+ T++ L++ + +LA +L G R VF EGGY+
Sbjct: 252 RAFRPELILVAAGVDAGAHDPMGRMMCTSRTFHALSSALCRLADELAGGRIVFAHEGGYS 311
Query: 275 LNSLSYSVADSFRAFLGEPSKASEF 299
V + A G P+ F
Sbjct: 312 AWYQPTLVLATAAAIAGLPAPHDPF 336
>gi|419762227|ref|ZP_14288475.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|397744858|gb|EJK92068.1| putative deacetylase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
Length = 387
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 149/263 (56%), Gaps = 13/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 78 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 130
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 131 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 186
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 187 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYNIN 246
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 247 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 306
Query: 251 ANIKQLAKDLCGSRCVFFLEGGY 273
++Q A LCG + V EGGY
Sbjct: 307 EQVQQAADRLCGGKLVMVHEGGY 329
>gi|390338172|ref|XP_003724721.1| PREDICTED: histone deacetylase 6-like [Strongylocentrotus
purpuratus]
Length = 1144
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/238 (39%), Positives = 140/238 (58%), Gaps = 17/238 (7%)
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
T+ + AAG + LVD+V +++ ++RPPGHHA K GFC F NVAIA+
Sbjct: 623 TYLSASVAAGCTLNLVDAVLSNQVLN----AVGIVRPPGHHADSKLASGFCFFNNVAIAS 678
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS--THQDGSY---PGTGKIDEV 179
+YAQ +G+KRV I+D+DVHHGNGT F DP + ++S H++G Y G +D+V
Sbjct: 679 KYAQNKYGVKRVLIVDWDVHHGNGTQRLFESDPSVLYISLHRHENGMYFPMGPEGAVDQV 738
Query: 180 GRGDGEGSTLNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
G+GDG+G +N+ G+ GD FH +I+P A +F P+L+ +SAG+DA DP
Sbjct: 739 GKGDGQGYNVNIGWNTGNKGLMGDAEYLAAFHHIIMPLAYQFNPELVFISAGFDAAKGDP 798
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
L + + Y ++ + + G R + LEGGYNLNS++ S+A R LG+P
Sbjct: 799 LGNCLVSPEGY----GHMTHMLSSIAGGRVITVLEGGYNLNSIAVSMAMCTRIMLGDP 852
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 142/282 (50%), Gaps = 20/282 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PAS ++I S+H++ Y+ L+++ + + L + + +F+ + A G + L
Sbjct: 151 PASDEEILSLHSQEYLDTLKRSGTLSPDELKELAQSYDSVFLCNESFEIARLAVGGLLEL 210
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+ V + R GFA IRP GHH+ G+ + N+A+ A+ A+ ++R+ I+
Sbjct: 211 TEKVVKGELRN----GFAFIRPCGHHSQRDIANGYSLVNNIALTAKIARTKLNVERILIV 266
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT--------GKIDEVGRGDGEGSTLNL 191
D+DVHHG G DDP I + S H+ Y T D +G G G+G +N+
Sbjct: 267 DWDVHHGQGIQYLTQDDPSIMYFSMHR---YENTSFWPHLEASNYDHIGEGAGKGYNVNV 323
Query: 192 PLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD TVF ++++P A F P L+LVSAG+DA DP + + + +
Sbjct: 324 PWNKIGMGDAEYLTVFRQLLLPLAYEFNPQLVLVSAGFDAAEGDPKGEMCISPDGFAHMT 383
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
++ LA+ + V LEGGY+L +L S A R LG+
Sbjct: 384 HHLMGLAQ----GKVVLGLEGGYSLEALGKSAAMCTRTLLGD 421
>gi|366995711|ref|XP_003677619.1| hypothetical protein NCAS_0G03800 [Naumovozyma castellii CBS 4309]
gi|342303488|emb|CCC71267.1| hypothetical protein NCAS_0G03800 [Naumovozyma castellii CBS 4309]
Length = 726
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 166/313 (53%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH++ + +EK ++ + E Y +F + G I
Sbjct: 146 ATEEEILEVHSKEHYDFIEKTSTMNREELLKATEKGDSVYFNNDSFASAKLPVGGSIEAC 205
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVAIAA+ + + ++R+ I
Sbjct: 206 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAIAAKNILKNYPESVRRIMI 261
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFYDD + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 262 LDWDIHHGNGTQKAFYDDDRVLYISLHRFELGKYYPGTINGQYDQTGEGKGEGFNCNITW 321
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P A+ F+PDL+++S+G+DA D + T Y +
Sbjct: 322 PVGGVGDAEYIWAFEQVVMPMAREFQPDLVIISSGFDAADGDSIGQCHVTPSCYGHMTHM 381
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LAK G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 382 LKSLAK---GNLCV-VLEGGYNLDAIARSALSVAKILIGEP--PDELPDPL---RDPKPE 432
Query: 313 VKQAIERVKHIHS 325
+ I++V + S
Sbjct: 433 AIEIIDKVIRLQS 445
>gi|325096734|gb|EGC50044.1| histone deacetylase hda1 [Ajellomyces capsulatus H88]
Length = 781
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/311 (35%), Positives = 160/311 (51%), Gaps = 26/311 (8%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ VH + ++ ++ I L Y + TF ++ + G I
Sbjct: 196 ATEEEISLVHDAEHYDFVQSTKFMLEEELIALEHTRDSIYFNSLTFTSAVLSCGGAIETC 255
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+V + + A+IRPPGHHA MGFC+F NV +AA+ Q+ G +++ I
Sbjct: 256 MAVVDRQVKN----AIAVIRPPGHHAERNKTMGFCLFNNVCVAAKVCQKEFGDKCRKILI 311
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP+I ++S H +DGS YPG G D G G G G +N+P
Sbjct: 312 LDWDVHHGNGIQKAFYDDPNILYISIHVYRDGSFYPGGEGGNWDRCGAGSGLGKNINIPW 371
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P A F PDL+++SAG+DA D L T Y A+
Sbjct: 372 PTQGMGDGDYMYAFQEVVMPIAYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----AH 427
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ ++ +L G + LEGGYN S+S S R +GEP P LY S+
Sbjct: 428 MTRMLMNLAGGKVAVCLEGGYNFRSISKSALAVTRTLMGEP--------PDRLYA--SSA 477
Query: 313 VKQAIERVKHI 323
+QA+ VK +
Sbjct: 478 SRQAVNTVKRV 488
>gi|336451873|ref|ZP_08622307.1| deacetylase, histone deacetylase/acetoin utilization protein
[Idiomarina sp. A28L]
gi|336281206|gb|EGN74489.1| deacetylase, histone deacetylase/acetoin utilization protein
[Idiomarina sp. A28L]
Length = 307
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 145/271 (53%), Gaps = 13/271 (4%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ K +PA +D+ H +YV+ + ++ ++ I L T ++ + Q L
Sbjct: 42 VLTQKEATPARKEDLYRAHDVSYVNDVFAKAPQSDEEHIWL---DPDTLMSSGSLQAFLH 98
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG+GI +D + S N+ F IRPPGHHA MGFCVF N+A+AA YA +
Sbjct: 99 AAGSGINGIDEIMNSSNQK----AFCAIRPPGHHATRSAAMGFCVFNNIAVAACYAMAKY 154
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
++R+ I+DFDVHHGNGT D F D + F S+ + YP TG D + +N+
Sbjct: 155 PVERIAIVDFDVHHGNGTEDIFIQDDRVLFCSSFEHPLYPNTGA-DTIS-----PHVINI 208
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P+P GS + E P F PDLILVSAG+D H+ D ++ Y+ +
Sbjct: 209 PMPAGSEGFEWQAAVAERWFPAIDAFAPDLILVSAGFDGHMEDDMSQFNLREDDYFWIGQ 268
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+K+LA + C R + LEGGY+++SL SV
Sbjct: 269 ELKKLADNHCQGRILAMLEGGYDMSSLGRSV 299
>gi|119499155|ref|XP_001266335.1| histone deacetylase hda1 [Neosartorya fischeri NRRL 181]
gi|119414499|gb|EAW24438.1| histone deacetylase hda1 [Neosartorya fischeri NRRL 181]
Length = 798
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/281 (37%), Positives = 147/281 (52%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I+ +H + + +E D + + I L Y TF SL +AG I
Sbjct: 195 ATEAEISLIHTPDHFAFVESTKDMSDDELIALEHTRDSIYFNKLTFASSLLSAGGAIETC 254
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV+IAAR Q G +++ I
Sbjct: 255 LAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSIAARVCQNTLGESCRKILI 310
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP+I ++S H QDG YPG G D G G G G +N+P
Sbjct: 311 VDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGDEGDWDHCGAGAGIGKNVNIPW 370
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F ++++P AQ F PDL++V++G+DA D L T Y A+
Sbjct: 371 PSQGMGDGDYMYAFQQIVMPIAQEFNPDLVIVASGFDAAAGDELGGCFVTPSCY----AH 426
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ + L + LEGGYN S+S S + +G+P
Sbjct: 427 MTHMLMTLAHGKVAVCLEGGYNFRSISKSALAVTKTLMGDP 467
>gi|406604970|emb|CCH43643.1| histone deacetylase 6/10 [Wickerhamomyces ciferrii]
Length = 760
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 151/281 (53%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A ++I VH ++ LE ++ + E Y ++ + + G I
Sbjct: 179 AKAEEILQVHTEEHLKFLESTNSMTKEKLMEETEKGDSVYFNHDSYLGAKLSCGGTIEAC 238
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V K + A++RPPGHHA P P GFC+F NVA+AA+ + + +KR+ I
Sbjct: 239 KAVVEGKVKN----ALAVVRPPGHHAEPDTPGGFCLFSNVAVAAKNILKNYPESVKRIVI 294
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNGT AFYDDP + ++S H Q YPGT G ++ G G EGS +N+P
Sbjct: 295 LDWDVHHGNGTQKAFYDDPRVLYISLHRYEQGKYYPGTLAGAANQCGGGAAEGSNVNIPW 354
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +VI+P F PDL+++S+G+DA D + + G Y +
Sbjct: 355 PVGGMGDGDYIYAFRKVIMPICYEFDPDLVIISSGFDAADGDMIGQCHVSPGAYGHMTHM 414
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+K LAK G+ CV LEGGYNL+S++ S + +GEP
Sbjct: 415 LKSLAK---GNLCV-VLEGGYNLDSIAVSALAVAKVLVGEP 451
>gi|76812059|ref|YP_333884.1| histone deacetylase family protein [Burkholderia pseudomallei
1710b]
gi|76581512|gb|ABA50987.1| histone deacetylase family protein [Burkholderia pseudomallei
1710b]
Length = 340
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + PMGFC+ N+ IA A+ H ++RV +ID+DVHHGNGT +YD
Sbjct: 105 FSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYD 164
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP+ +S HQD + PG DE G G G GS +N+PL G+GD A R F +++P
Sbjct: 165 DPNTLTISLHQDRCFPPGYSGADERGAGAGAGSNVNVPLLAGAGDDAYRYAFERIVLPAL 224
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P+L++V++G DA+ +DPLA +Q + +Y + +KQ A+ CG R V EGGY+
Sbjct: 225 DAFRPELVIVASGLDANAVDPLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYS 284
>gi|194227003|ref|XP_001914927.1| PREDICTED: histone deacetylase 10-like [Equus caballus]
Length = 716
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/281 (38%), Positives = 152/281 (54%), Gaps = 18/281 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YV+ L + + L Y +TF + AAGA + LV
Sbjct: 55 ASEEELGLVHSPEYVALLRGTQALGTGELQALSGQYDAIYFHPSTFHCARLAAGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA++A++ HGL R+ I
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAKHAKQKHGLHRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+D+HHG G F DDP + + S H+ Y D VG+G G G T+NLP
Sbjct: 169 VDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPYLQESDTDAVGQGQGRGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LV+AG+D+ V DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHVLLPLAFEFDPELVLVAAGFDSAVGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ QL + L R LEGGY+L SLS SV +A LG+P
Sbjct: 285 LTQLLQVLACGRVCAVLEGGYHLESLSQSVCMMVQALLGDP 325
>gi|403282797|ref|XP_003932825.1| PREDICTED: histone deacetylase 10 [Saimiri boliviensis boliviensis]
Length = 669
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 152/280 (54%), Gaps = 14/280 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ +L Y +TF + A GA + LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQVLSGQFDAIYFHPSTFHCARLAVGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ I+D
Sbjct: 115 DAVLTGVVQN----GLALVRPPGHHSQRAAANGFCVFNNVAIAAVHAKQKHGLHRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP I + S H+ + D VGRG G G T+NLP
Sbjct: 171 WDVHHGQGIQYLFEDDPSILYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A++
Sbjct: 231 VGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPACF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 287 QLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|321473004|gb|EFX83972.1| putative histone deacetylase HDAC6 protein [Daphnia pulex]
Length = 1022
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/306 (32%), Positives = 160/306 (52%), Gaps = 19/306 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ +H Y+ + + L G + T+Q +L +AG+ + +V
Sbjct: 521 ADREELLWLHQADYIDEIAATAGKKQSTLNQLERQYGSIFICPETYQAALLSAGSSLQIV 580
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+S+ + ++R G ++RPPGHHA GFC F N A+AA+YA H L+R+ I+D
Sbjct: 581 ESILSGESRS----GIGVVRPPGHHAECDEAYGFCFFNNTALAAKYAIEIHHLERILIVD 636
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSY---PGTGKIDEVGRGDGEGSTLNLPLPG-G 196
+DVHHGNG F +DP + ++S H+ + P VG G G G T+N+ P G
Sbjct: 637 WDVHHGNGIQRMFEEDPRVLYISLHRFDIFPFKPEESDCSVVGSGSGAGYTVNIAWPKRG 696
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
GDT F ++I+P A ++ P L+LV+AG+DA DPL + T Y + + L
Sbjct: 697 MGDTEYLAAFQQIIMPIAYQYNPQLVLVAAGFDAAQGDPLGGCKITPEGYGQMTNMLSSL 756
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD--NPAILYEEPSAKVK 314
A+ R LEGGYNL+S+S+S+ +A LG+P + + NPA + + +K
Sbjct: 757 AQ----GRVAILLEGGYNLDSISHSMTMCAKALLGDPLPSPRIEPLNPAAI-----STIK 807
Query: 315 QAIERV 320
Q + +
Sbjct: 808 QVVSHL 813
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 148/270 (54%), Gaps = 22/270 (8%)
Query: 55 GSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGF 114
G Y +T + +L AAG+ + +VD++ K + G A+IRPPGHHA+ G+
Sbjct: 130 GYDAIYIHPSTNELALLAAGSTVEMVDALLDGKIQN----GMAVIRPPGHHAMKSEYCGY 185
Query: 115 CVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYP 171
C F NVA+AA++A G++++ I+D+DVHHG T FY+DP + + S H+ +P
Sbjct: 186 CFFNNVAVAAQHALDNKGVEKILIVDWDVHHGQATQQMFYEDPRVLYFSVHRYEHGAFWP 245
Query: 172 GTGKID--EVGRGDGEGSTLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGY 228
+ D +G G G+G +N+PL G+ ++H++++P A F+P+LI+VSAGY
Sbjct: 246 NLRESDFHYIGSGAGKGFNVNVPLNKTKMGNADYLAIWHQLLLPLAYEFQPELIIVSAGY 305
Query: 229 DAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRA 288
DA + ++ T Y L +++ LA+ + LEGGY L SL+ A + R
Sbjct: 306 DAALGCFEGEMEITPACYSHLTSSLMGLAQ----GKLAVVLEGGYCLKSLAEGAALTLRT 361
Query: 289 FLGEPSKASEFDNPAIL-YEEPSAKVKQAI 317
LG+P P I E+P ++++I
Sbjct: 362 LLGDPC-------PVIAKIEQPCQSIQESI 384
>gi|119593920|gb|EAW73514.1| histone deacetylase 10, isoform CRA_d [Homo sapiens]
Length = 662
Score = 177 bits (450), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|399546796|ref|YP_006560104.1| histone deacetylase family protein [Marinobacter sp. BSs20148]
gi|399162128|gb|AFP32691.1| histone deacetylase family protein [Marinobacter sp. BSs20148]
Length = 367
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 162/287 (56%), Gaps = 26/287 (9%)
Query: 13 IELKNFSPASV-DDIASVHARAYVS------GLEKAMDRASQQGIILIEGSGPTYATATT 65
++ ++ +PA+ D +A VH +Y+ G +DR + T + +
Sbjct: 70 VQFQSGAPAATYDQLARVHITSYLDHLFSLDGKRAWLDRDT------------TAVSPDS 117
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
+ + AAAG IA V+SV + + FAL+RPPGHHA P GFC+ NVA+AA
Sbjct: 118 IKAATAAAGNAIAAVESVCKGEAQS----AFALVRPPGHHAEPVRARGFCLLNNVAVAAA 173
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS-YPGTGKIDEVGRGDG 184
+AQ G +RV IID+D HHGNGT D F+ DPD+ F TH YPG+G I+EVG G G
Sbjct: 174 HAQAKLGCERVLIIDWDAHHGNGTQDIFWADPDVLFFDTHCAAPFYPGSGLIEEVGVGLG 233
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
EG T+N+PLP +GD A F ++++P A+ FKPDL+LVSAG+D H D ++ T
Sbjct: 234 EGYTINVPLPETAGDIAFEKAFRDILMPAAEHFKPDLVLVSAGFDPHRND--MAMNLTYD 291
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ +L ++ +A C + F LEGGYNL+SL+ V G
Sbjct: 292 GFKVLTRIVQDIADTHCEGKLAFVLEGGYNLSSLAKGVHAVLEVLTG 338
>gi|392410691|ref|YP_006447298.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390623827|gb|AFM25034.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 346
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 160/306 (52%), Gaps = 17/306 (5%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
PA+++ + VH A++ + K S+ I + P ++ ++ + AAG I
Sbjct: 50 EPATLEHLELVHTPAFIRKILKT----SEHDFINLAPDTPV--SSQSYISAWLAAGGCIR 103
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
+ ++ + + F L+RPPGHHA P G+C+F N+ IAA+YA HG +R+ I
Sbjct: 104 GLQALLSGRCDA----VFCLVRPPGHHATPDKAGGYCIFNNIGIAAKYAIERHGFRRILI 159
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+DFD+HHGNG D FY+D + +LSTH G YP TG+ E G G G G ++N+P+P
Sbjct: 160 LDFDIHHGNGIQDLFYEDDSVLYLSTHSLGRYPHTGEWSETGTGRGLGYSVNIPVPNDIS 219
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
D ++ +++ P + ++P+LILV+AG+D H DP+ Q T + + I +L
Sbjct: 220 DMDFLYMYWKLLGPIMRYYRPELILVAAGFDGHHRDPIGRTQLTEQAFRWITEAILELRD 279
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIE 318
+ +F LEGG++ +L+ V + + P +L S K K +E
Sbjct: 280 AVKSPPLLFALEGGHDAAALADCVKQVLDVLTWKERRPR---IPLLL----SPKGKSLVE 332
Query: 319 RVKHIH 324
R + +H
Sbjct: 333 RAEAVH 338
>gi|444316756|ref|XP_004179035.1| hypothetical protein TBLA_0B06950 [Tetrapisispora blattae CBS 6284]
gi|387512075|emb|CCH59516.1| hypothetical protein TBLA_0B06950 [Tetrapisispora blattae CBS 6284]
Length = 795
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 170/313 (54%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A++++I VH+ + LEK + +Q + E Y +FQ + + G I
Sbjct: 127 ATMNEILEVHSIEHFKYLEKTSNDNREQLLKETENGDSVYFNNDSFQSAKLSCGGAIEAC 186
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHH+ P+ GFC+F NVA+A + + + +++V I
Sbjct: 187 KAVVEGRVKN----AMAVVRPPGHHSEPESAGGFCLFSNVAVATKNILKNYPESVRKVLI 242
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+D ++ ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 243 LDWDIHHGNGTQKAFYNDDNVLYISLHRFELGKYYPGTIQGQYDQTGEGKGEGFNCNITW 302
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F +V++P ++ F+PDL+++S+G+DA D + + Y +
Sbjct: 303 PIGAVGDAEYMWAFEQVVMPMSREFQPDLVIISSGFDAADGDTIGQCHVSPSCYGHMTHM 362
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P ++P +
Sbjct: 363 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVSKILIGEP--PDELPDP---LKDPKPE 413
Query: 313 VKQAIERVKHIHS 325
V + I+++ + S
Sbjct: 414 VIEMIDKIIRLQS 426
>gi|392865409|gb|EAS31193.2| histone deacetylase clr3 [Coccidioides immitis RS]
Length = 760
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 147/281 (52%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ +H + + D + + I L Y TF ++ A G I
Sbjct: 182 ATHEEISLIHDSEHYDFVLSTKDMSEDELIALESTRDSIYFNTLTFTSAILACGGAIETC 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA--HGLKRVFI 138
+V + K + A+IRPPGHHA MGFC+F NV++AAR Q+ +++ I
Sbjct: 242 KAVVSGKVKN----AIAVIRPPGHHAEQCQAMGFCLFNNVSVAARVCQKTFKDKCRKIMI 297
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG +AFYDDP++ ++S H +DG+ YPG G D G G+G G +N+P
Sbjct: 298 VDWDVHHGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQGNWDHCGEGNGLGKNVNIPW 357
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EVI+P F PDL+++SAG+DA D L T Y A+
Sbjct: 358 PTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAAAGDELGGCFVTPPCY----AH 413
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ + +L + LEGGYN S+S S R +GEP
Sbjct: 414 MTSMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 454
>gi|254576937|ref|XP_002494455.1| ZYRO0A01870p [Zygosaccharomyces rouxii]
gi|238937344|emb|CAR25522.1| ZYRO0A01870p [Zygosaccharomyces rouxii]
Length = 707
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 171/313 (54%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+V+++ VH + ++ +EK ++ + E Y + ++ + G I
Sbjct: 128 ATVEELLQVHTKEHLEFIEKTSQMNREELLKETETGDSVYFNSDSYSAAKLPCGGAIEAC 187
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A+IRPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 188 KAVVEGRVKN----ALAVIRPPGHHAEPEMAGGFCLFSNVAVAAQNILKNYPESVRRILI 243
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 244 LDWDIHHGNGTQKAFYNDDRVLYISLHRFELGKYYPGTIHGQYDQTGEGKGEGFNCNITW 303
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F ++++P A+ ++PDL+++S+G+DA D + + Y +
Sbjct: 304 PVGGVGDAEYMLAFEQIVMPMAREYRPDLVIISSGFDAADGDTIGQCHVSPSCYGHMTHM 363
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP + E +P+ + P +
Sbjct: 364 LKSLAR---GNLCV-ALEGGYNLDAIATSALSVAKILIGEPPE--ELPDPS---KNPKLE 414
Query: 313 VKQAIERVKHIHS 325
+ I++V H+ S
Sbjct: 415 AIEMIDKVIHVQS 427
>gi|149927081|ref|ZP_01915339.1| histone deacetylase family protein [Limnobacter sp. MED105]
gi|149824302|gb|EDM83522.1| histone deacetylase family protein [Limnobacter sp. MED105]
Length = 306
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/257 (40%), Positives = 140/257 (54%), Gaps = 15/257 (5%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
+ +VH AYV ++ I+ G T + + + AAGA + VD V A
Sbjct: 56 VTAVHNPAYVESIKARFPLKRN-----IDIDGDTTLSEFSLDAARRAAGACVHAVDLVMA 110
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
F +RPPGHHA MGFCVF NVAIAA++A A+ L+RV I+DFDVHH
Sbjct: 111 HAVNN----AFCAVRPPGHHACVDRAMGFCVFNNVAIAAQHAIDAYRLERVLIVDFDVHH 166
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT AF ++P + ST Q YP +G + DG + +N P+ G G A++
Sbjct: 167 GNGTEHAFANNPKVLMCSTFQSPLYPFSGGL------DGARNMVNCPIQPGGGREAIKQA 220
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
V RFKP L+LVSAG+DAH DPLA +Q TT Y + +K++A++ C +
Sbjct: 221 IQTHWVDAIDRFKPQLVLVSAGFDAHESDPLADMQLTTEDYGWITQFLKRVAEEYCDGKL 280
Query: 266 VFFLEGGYNLNSLSYSV 282
V LEGGY L +L+ SV
Sbjct: 281 VSTLEGGYELEALADSV 297
>gi|444707857|gb|ELW49014.1| Plexin-B2 [Tupaia chinensis]
Length = 5137
Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 166/312 (53%), Gaps = 30/312 (9%)
Query: 21 ASVDDIASVHARAYVSGLE--KAMDRASQQGIILIEGSGP---TYATATTFQESLAAAGA 75
AS ++ VH+ YV+ + +A+ A Q + SG Y +T+ + AAGA
Sbjct: 2755 ASEAELGLVHSLEYVALVRGTQALGEAELQAL-----SGQYDAVYFHPSTYHCARLAAGA 2809
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
+ LVD+V A R G AL+RPPGHH+ GFCVF NVAIAA++A++ HGL R
Sbjct: 2810 ALQLVDAVLAGTVRN----GLALVRPPGHHSQRAAASGFCVFNNVAIAAQHAKQKHGLHR 2865
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLN 190
+ I+D+D+HHG G F DDP + + S H+ + D VGRG G G T+N
Sbjct: 2866 ILIVDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPFLRESDADVVGRGQGRGFTVN 2925
Query: 191 LPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
LP G G+ F V++P A F P+L+LV+AG+D+ + DP +Q T +
Sbjct: 2926 LPWNQVGMGNAEYLAAFLHVLLPLAFEFGPELVLVAAGFDSAIGDPEGQMQATPECF--- 2982
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
A++ L + L G R LEGGY+L SL+ SV + +A LG+P A P + P
Sbjct: 2983 -AHLTHLLQVLAGGRVCAVLEGGYHLESLAQSVCMTVQALLGDP--APPLLRPMV----P 3035
Query: 310 SAKVKQAIERVK 321
+I+RV+
Sbjct: 3036 CQSALVSIQRVR 3047
>gi|452944050|ref|YP_007500215.1| histone deacetylase superfamily [Hydrogenobaculum sp. HO]
gi|452882468|gb|AGG15172.1| histone deacetylase superfamily [Hydrogenobaculum sp. HO]
Length = 309
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 147/266 (55%), Gaps = 12/266 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+V++++ +H Y+ ++ + + G L TY ++ ++ AAGA + +
Sbjct: 50 ATVEEVSKIHDTYYI---QEIYEFCKKGGGYL---DPDTYVYQYSYDVAMMAAGAILKAI 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ + +K F L+RPPGHHA MGFC+F NVAI AR AQ G K+V+I D
Sbjct: 104 EDIKDAKQEA----AFCLVRPPGHHAEYAKAMGFCIFNNVAIGARKAQNL-GYKKVYIAD 158
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHH NGT FY+D +F STH YPGTG DE G G+G G+TLN+PL G+GD
Sbjct: 159 FDVHHPNGTQHIFYEDGSVFLFSTHCYPFYPGTGAADEKGFGEGLGTTLNVPLRAGTGDE 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
V+ + FKPD++L+SAGYD H DPL ++ T+ + + AK+L
Sbjct: 219 TYIEVYQTKFSESFRAFKPDILLISAGYDLHEDDPLGPMRVTSQGIKEITNILINAAKEL 278
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSF 286
V LEGGYN N+ + + D+
Sbjct: 279 -NVPVVATLEGGYNYNATAQGILDTL 303
>gi|134277132|ref|ZP_01763847.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
gi|134250782|gb|EBA50861.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
Length = 369
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + PMGFC+ N+ IA A+ H ++RV +ID+DVHHGNGT +YD
Sbjct: 134 FSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYD 193
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP+ +S HQD + PG DE G G G GS +N+PL G+GD A R F +++P
Sbjct: 194 DPNTLTISLHQDRCFPPGYSGADERGAGAGAGSNVNVPLLAGAGDDAYRYAFERIVLPAL 253
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P+L++V++G DA+ +DPLA +Q + +Y + +KQ A+ CG R V EGGY+
Sbjct: 254 DAFRPELVIVASGLDANAVDPLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYS 313
>gi|195397517|ref|XP_002057375.1| GJ17051 [Drosophila virilis]
gi|194147142|gb|EDW62861.1| GJ17051 [Drosophila virilis]
Length = 1138
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 160/314 (50%), Gaps = 35/314 (11%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D++ H RA+V+ + + + R+ ++ + G Y TF+ ++ A+GA + V
Sbjct: 593 ATTDEVCLAHTRAHVNSVRRLLGRSVEELQQVGAGYNSVYLHPRTFECAILASGAVLQAV 652
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
DSV ++R G +RPPGHHA P P GFC+F N R+ I+D
Sbjct: 653 DSVLRGQSRS----GICNVRPPGHHAEPDQPHGFCIFNN---------------RILIVD 693
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPG--TGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHGNGT F +P + ++S H+ +P G D VG+ G G +N+P
Sbjct: 694 WDVHHGNGTQHIFESNPKVLYISVHRYEHGAFFPKGPAGNYDVVGKNAGRGFNVNIPWNK 753
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD F ++I+P A F P L+LVSAG+DA + DPL + T Y + +
Sbjct: 754 KGMGDLEYALAFQQLILPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGLFTHWLS 813
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF------DNPAILYEE 308
LA G R + LEGGYN+NS+SY++ + LG+P +F +P + ++
Sbjct: 814 ALA----GGRIIVCLEGGYNVNSISYAMTMCTKTLLGDPVPTPQFATTAHQRSPTVAFQS 869
Query: 309 PSAKVKQAIERVKH 322
++ +E+ +H
Sbjct: 870 CVETLQLCVEQQRH 883
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 171/331 (51%), Gaps = 20/331 (6%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGII-LIEGSGPT 59
+E E + E N A+ D+I +H+ + LE+ + + L
Sbjct: 144 LERCRELKLVERCLQLNSRLATKDEILKLHSMEHYERLEQTSAVHDAEAMEELSSHYDAI 203
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +TF+ SL A+G+ I LV+ + K + G A+IRPPGHHA+ G+C F N
Sbjct: 204 YIHPSTFRLSLLASGSTIELVEQLLLGKAQN----GMAIIRPPGHHAMKSEFNGYCYFNN 259
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKI 176
VA+AA++A AH L+R+ IID+DVHHG GT FY+D + + S H + GS +P +
Sbjct: 260 VALAAQHALDAHQLQRILIIDYDVHHGQGTQRFFYNDSRVLYFSIHRYEHGSFWPNLQES 319
Query: 177 D--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
D +G G G G N+PL G G+ +F ++++P A ++P+LI+VSAGYDA +
Sbjct: 320 DYHAIGAGSGTGYNFNVPLNAKGLGNGDYMAIFQQLLLPVAMEYQPELIIVSAGYDAALG 379
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
P ++ T Y L + LA R LEGGY + SLS A + RA LG+P
Sbjct: 380 CPEGEMEVTPACYPHLLNPLLHLAN----CRVAVVLEGGYCVESLSEGAALTLRALLGDP 435
Query: 294 SKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
A P L PS +++A+ ++H
Sbjct: 436 CPA--LVEPLQL---PSPVLREALLNCIYVH 461
>gi|365138759|ref|ZP_09345372.1| hypothetical protein HMPREF1024_01403 [Klebsiella sp. 4_1_44FAA]
gi|363654729|gb|EHL93612.1| hypothetical protein HMPREF1024_01403 [Klebsiella sp. 4_1_44FAA]
Length = 370
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 170/316 (53%), Gaps = 22/316 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+ L++ +PAS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LALRSAAPASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKAQL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRVVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI--LYEE 308
++Q A LCG + V EGGY + + + A G +E +P + + ++
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSG---IRTEVQDPLLEFIQQQ 347
Query: 309 PSAKV----KQAIERV 320
P A +QAI+R+
Sbjct: 348 PRAAFAQFQRQAIDRL 363
>gi|428167512|gb|EKX36470.1| hypothetical protein GUITHDRAFT_59248, partial [Guillardia theta
CCMP2712]
Length = 301
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/292 (38%), Positives = 156/292 (53%), Gaps = 31/292 (10%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGL------EKAMDRASQQGIILIEGSGPTYATATTF 66
+EL A ++++SVHA YV + +K +D + + Y +
Sbjct: 24 MELVRARLARPEELSSVHAAGYVHTICSLPEEQKELDDIASK-------MNSVYLCPQSR 76
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFAL--IRPPGHHAIPKGPMGFCVFGNVAIAA 124
+ +L AAG+ + VA++ LG AL +RPPGHHA+P MGFC+FGNVA+AA
Sbjct: 77 ECALLAAGSVVEATRMVASNA------LGRALCAVRPPGHHALPACAMGFCIFGNVAVAA 130
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GS-YPG--TGKIDEV 179
R A+ KR+ I D+DVHHGNGT F +D + F S H+ GS YPG G
Sbjct: 131 REAKLRQWAKRILIFDWDVHHGNGTQKMFLEDSSVLFFSVHRHDRGSFYPGGPDGSSSSC 190
Query: 180 GRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
G +G+G T+N+ P G+GD V ++++P + F+PDL+L+SAG+DA DPL
Sbjct: 191 GTREGQGFTVNVAWPKPGAGDAEYLAVLDQLLLPIGREFRPDLVLISAGFDAAQGDPLGG 250
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Q T YY + QLA G + V LEGGY+L + S SVA A L
Sbjct: 251 CQVTPSCYYKMTQACMQLA----GGKVVLVLEGGYSLRATSQSVAACTCALL 298
>gi|126454301|ref|YP_001066637.1| histone deacetylase family protein [Burkholderia pseudomallei
1106a]
gi|167815297|ref|ZP_02446977.1| histone deacetylase family, putative [Burkholderia pseudomallei 91]
gi|167845247|ref|ZP_02470755.1| histone deacetylase family, putative [Burkholderia pseudomallei
B7210]
gi|167900320|ref|ZP_02487721.1| histone deacetylase family, putative [Burkholderia pseudomallei
7894]
gi|167916885|ref|ZP_02503976.1| histone deacetylase family, putative [Burkholderia pseudomallei
112]
gi|167918512|ref|ZP_02505603.1| histone deacetylase family, putative [Burkholderia pseudomallei
BCC215]
gi|217421628|ref|ZP_03453132.1| histone deacetylase family protein [Burkholderia pseudomallei 576]
gi|242316889|ref|ZP_04815905.1| histone deacetylase family protein [Burkholderia pseudomallei
1106b]
gi|254189194|ref|ZP_04895705.1| histone deacetylase family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|254261562|ref|ZP_04952616.1| histone deacetylase family protein [Burkholderia pseudomallei
1710a]
gi|254297304|ref|ZP_04964757.1| histone deacetylase family protein [Burkholderia pseudomallei 406e]
gi|386861415|ref|YP_006274364.1| histone deacetylase family protein [Burkholderia pseudomallei
1026b]
gi|403519066|ref|YP_006653200.1| histone deacetylase family protein putative [Burkholderia
pseudomallei BPC006]
gi|418533686|ref|ZP_13099545.1| histone deacetylase family protein [Burkholderia pseudomallei
1026a]
gi|126227943|gb|ABN91483.1| histone deacetylase family protein [Burkholderia pseudomallei
1106a]
gi|157807910|gb|EDO85080.1| histone deacetylase family protein [Burkholderia pseudomallei 406e]
gi|157936873|gb|EDO92543.1| histone deacetylase family protein [Burkholderia pseudomallei
Pasteur 52237]
gi|217395370|gb|EEC35388.1| histone deacetylase family protein [Burkholderia pseudomallei 576]
gi|242140128|gb|EES26530.1| histone deacetylase family protein [Burkholderia pseudomallei
1106b]
gi|254220251|gb|EET09635.1| histone deacetylase family protein [Burkholderia pseudomallei
1710a]
gi|385360646|gb|EIF66560.1| histone deacetylase family protein [Burkholderia pseudomallei
1026a]
gi|385658543|gb|AFI65966.1| histone deacetylase family protein [Burkholderia pseudomallei
1026b]
gi|403074709|gb|AFR16289.1| histone deacetylase family protein putative [Burkholderia
pseudomallei BPC006]
Length = 369
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + PMGFC+ N+ IA A+ H ++RV +ID+DVHHGNGT +YD
Sbjct: 134 FSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYD 193
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP+ +S HQD + PG DE G G G GS +N+PL G+GD A R F +++P
Sbjct: 194 DPNTLTISLHQDRCFPPGYSGADERGAGAGAGSNVNVPLLAGAGDDAYRYAFERIVLPAL 253
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P+L++V++G DA+ +DPLA +Q + +Y + +KQ A+ CG R V EGGY+
Sbjct: 254 DAFRPELVIVASGLDANAVDPLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYS 313
>gi|444352694|ref|YP_007388838.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Enterobacter aerogenes EA1509E]
gi|443903524|emb|CCG31298.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Enterobacter aerogenes EA1509E]
Length = 371
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 17/314 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLA 71
+EL + + AS++D+ +H +Y+ + D G++ E GP +++ +
Sbjct: 62 LELCSAAAASLEDLRRIHPDSYLERFKAISDNGG--GMLGKEAPLGPG-----SYEIACL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A V++V K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 115 SAGLACAAVEAVL--KGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKALL 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG +N
Sbjct: 171 GLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYSGEDDRGVGAGEGYNIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PL G+GD + R +++P RF+P+LI+V+ GYDA+ +DPLA +Q + ++ +
Sbjct: 231 IPLLAGAGDDSWRYALETIVIPALARFEPELIIVACGYDANAMDPLARMQLHSDSFRAMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++Q A LCG + V EGGY + + + G ++ + I ++P
Sbjct: 291 EQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMETLSGVRTEVQDPLLEFIQQQQPR 350
Query: 311 AKV----KQAIERV 320
A +QAI+R+
Sbjct: 351 AAFAQFQRQAIDRL 364
>gi|148556150|ref|YP_001263732.1| histone deacetylase superfamily protein [Sphingomonas wittichii
RW1]
gi|148501340|gb|ABQ69594.1| histone deacetylase superfamily [Sphingomonas wittichii RW1]
Length = 369
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 138/262 (52%), Gaps = 11/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ L PA+V+D+ VH R Y+ + D L S Y A + +
Sbjct: 61 LTLPEAIPATVEDVCRVHPRDYIDRFKATSDAGGGDLGHLAPFSKGGYEIA------MLS 114
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G IA VD V + K +AL RP GHH + PMGFC+ N+ IA A+ HG
Sbjct: 115 CGLAIAAVDDVLSGKVDN----AYALCRPAGHHCLADTPMGFCLLANIPIAIEAAKARHG 170
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
+ RV ++D+DVHHGNGT FYD D+ +S HQD + PG ++ G G G G LN+
Sbjct: 171 ISRVAVVDWDVHHGNGTQSIFYDRADVLTISIHQDRCFPPGYSGAEDRGEGAGLGYNLNV 230
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP G+G A F ++VP FKP+LI+V++G DA+ +DPLA + + +Y +L
Sbjct: 231 PLPAGAGHDAYVQAFDNIVVPALDDFKPELIIVASGLDANSVDPLARMLLHSESYRLLTQ 290
Query: 252 NIKQLAKDLCGSRCVFFLEGGY 273
+ A LCG + V EGGY
Sbjct: 291 KMLDAAARLCGGKLVVVHEGGY 312
>gi|359146416|ref|ZP_09179944.1| Histone deacetylase [Streptomyces sp. S4]
Length = 382
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 130/205 (63%), Gaps = 2/205 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+ L+RPPGHHA P M C++ N+A+AAR AQ HG++RV ++D+DVHHGNG FYD
Sbjct: 133 YCLVRPPGHHAEPDRAMALCLYNNLAVAARTAQH-HGVRRVLVLDWDVHHGNGLQRVFYD 191
Query: 156 DPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DPD+ ++S HQDG +P +G++ E G G G G TLN+PLP GSG A +V+ P A
Sbjct: 192 DPDVLYISLHQDGLFPAASGRVLETGTGKGTGRTLNVPLPAGSGHGAYLAALDQVVEPAA 251
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F+P+LILV+AG DA DP+ + T+ T++ LA+ + +LA +L G R VF EGGY+
Sbjct: 252 RAFRPELILVAAGVDAGAHDPMGRMMCTSRTFHALASALCRLADELAGGRIVFAHEGGYS 311
Query: 275 LNSLSYSVADSFRAFLGEPSKASEF 299
V + A G P+ F
Sbjct: 312 AWYQPTLVLATAAAIAGLPAPHDPF 336
>gi|355572754|ref|ZP_09043820.1| histone deacetylase superfamily [Methanolinea tarda NOBI-1]
gi|354824298|gb|EHF08551.1| histone deacetylase superfamily [Methanolinea tarda NOBI-1]
Length = 359
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/274 (39%), Positives = 143/274 (52%), Gaps = 13/274 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH YV LE+A R G I + T +L AAG AL
Sbjct: 53 ATREQVERVHHPEYVRFLEEASRRG---GFIDFD----TVVPRGLLDCALLAAGG--ALH 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
++ K D FAL+RPPGHHA GFC N+AI R+ Q G+++V ++D
Sbjct: 104 AGISVWKG--DFTNAFALVRPPGHHARAGTGAGFCYLNNMAIMVRHLQH-EGVRKVLVLD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+D HHG+GT FY DP + F S HQ YPG+G IDE+G G G G T+N+P+P G+GD
Sbjct: 161 WDAHHGDGTQSIFYADPSVLFTSIHQKPLYPGSGDIDEMGEGPGLGYTVNMPVPPGTGDV 220
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ +F VI P A+ F PD+I +SAG D H DPL L + Y L LA +
Sbjct: 221 SYHYLFDTVIAPLAREFSPDIIAISAGQDVHFTDPLTGLAVSARGYAELVRKAVMLADSI 280
Query: 261 CGSRCVFFLEGGYNLN-SLSYSVADSFRAFLGEP 293
C + V LEGGY++ L Y+ A G P
Sbjct: 281 CNGKLVAVLEGGYSVEGGLPYTNLGIIAALAGLP 314
>gi|303319433|ref|XP_003069716.1| histone deacetylase clr3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109402|gb|EER27571.1| histone deacetylase clr3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040837|gb|EFW22770.1| histone deacetylase 6 [Coccidioides posadasii str. Silveira]
Length = 760
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 147/281 (52%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ +H + + D + + I L Y TF ++ A G I
Sbjct: 182 ATHEEISLIHDSEHYDFVLSTKDMSEDELIALESTRDSIYFNTLTFTSAILACGGAIETC 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA--HGLKRVFI 138
+V + K + A+IRPPGHHA MGFC+F NV++AAR Q+ +++ I
Sbjct: 242 KAVVSGKVKN----AIAVIRPPGHHAEQCQAMGFCLFNNVSVAARVCQKTFKDKCRKIMI 297
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG +AFYDDP++ ++S H +DG+ YPG G D G G+G G +N+P
Sbjct: 298 VDWDVHHGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQGNWDHCGEGNGLGKNVNIPW 357
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EVI+P F PDL+++SAG+DA D L T Y A+
Sbjct: 358 PTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAAAGDELGGCFVTPPCY----AH 413
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ + +L + LEGGYN S+S S R +GEP
Sbjct: 414 MTSMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 454
>gi|406706811|ref|YP_006757164.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
gi|406652587|gb|AFS47987.1| histone deacetylase family protein [alpha proteobacterium HIMB5]
Length = 309
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 123/219 (56%), Gaps = 8/219 (3%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G+ I +D V K + F +RPPGHHA MGFC++ NVA+ A Y
Sbjct: 96 AVGSIITAIDGVIEKKYKN----AFCAVRPPGHHAEKDKAMGFCIYNNVAVGATYLIEKF 151
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
K++ IIDFDVHHGNGT D FYD+ + ++STHQ YPG+G +E G+ + NL
Sbjct: 152 KYKKLAIIDFDVHHGNGTQDIFYDNEKVLYISTHQFPYYPGSGSDNEKGK---HNNVFNL 208
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G+ + E ++ + FKP+ IL SAG+DAH DPLA L+ T +Y++
Sbjct: 209 PLEAGTTSEQYLNAY-EYVLKKLKEFKPEFILFSAGFDAHKNDPLAQLKLETEDFYIITQ 267
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
QLAK+ C + V LEGGY+LN+L S A +
Sbjct: 268 RTLQLAKEYCNGKVVSILEGGYDLNALRDSTKRHVDALI 306
>gi|82702687|ref|YP_412253.1| histone deacetylase superfamily protein [Nitrosospira multiformis
ATCC 25196]
gi|82410752|gb|ABB74861.1| Histone deacetylase superfamily [Nitrosospira multiformis ATCC
25196]
Length = 314
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 107/265 (40%), Positives = 144/265 (54%), Gaps = 16/265 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+V + VH R +++ L A RA+ G + ++ T + + AAGA +
Sbjct: 55 ATVGQLERVHTREHIARLHAAASRAASGGFVYLDPD--TAMNRHSLGAAYRAAGAVVLAA 112
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D V A++N F IRPPGHHA PMGFC+F N+A+A +A H LKRV +
Sbjct: 113 DLVIEGAAEN------AFCSIRPPGHHAERGYPMGFCLFNNIAVAVAHALETHALKRVAV 166
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+DFDVHHGNGT D F DP + +ST Q YP +G GR + +N+PLP GS
Sbjct: 167 VDFDVHHGNGTEDIFQHDPRVMMVSTFQHPFYPYSGI---AGRSE---RMVNIPLPAGSN 220
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
R E +P +RFKP ++ VSAG+DAH D LASL Y + IK++A+
Sbjct: 221 GKVFRKAVDEFWLPALERFKPQMLFVSAGFDAHADDELASLNLVEDDYAWVTEKIKEVAR 280
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVA 283
G R V LEGGY L +L+ SVA
Sbjct: 281 AYAGKRIVSVLEGGYALAALARSVA 305
>gi|410908385|ref|XP_003967671.1| PREDICTED: histone deacetylase 10-like [Takifugu rubripes]
Length = 589
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 14/276 (5%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
DI VH+ Y+ ++K + + G Y + + AAGA + LVDSV
Sbjct: 59 DILLVHSEEYLEAVKKTPYMTLAELMEFTLQYGDVYFHPNIYHCAKLAAGAALQLVDSVM 118
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
R G AL+RPPGHH++ GFCVF NVAIAARYA++ +GL+RV I+D+D+H
Sbjct: 119 TGAVR----TGMALVRPPGHHSMRSAANGFCVFNNVAIAARYARQKYGLERVLIVDWDIH 174
Query: 145 HGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGK--IDEVGRGDGEGSTLNLPLPG-GSG 198
HG G F DDP + + S H+ +P + D VG+ G G +N+P G
Sbjct: 175 HGQGVQYCFEDDPSVLYFSWHRYEHQKFWPNLRESDYDTVGKEKGAGFNINVPWNRVGMR 234
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
++ +VF +++P A F PDL+LV AG+D+ + DP + + + A++ L
Sbjct: 235 NSDYLSVFFHILLPVAYEFCPDLVLVCAGFDSAIGDPEGEMCASPDIF----AHLTHLLM 290
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+L G + LEGGYNL SL SV + + LG+P+
Sbjct: 291 NLAGGKLCAVLEGGYNLTSLPQSVCQTVQTLLGDPA 326
>gi|430742652|ref|YP_007201781.1| deacetylase [Singulisphaera acidiphila DSM 18658]
gi|430014372|gb|AGA26086.1| deacetylase, histone deacetylase/acetoin utilization protein
[Singulisphaera acidiphila DSM 18658]
Length = 332
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/194 (44%), Positives = 115/194 (59%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
L+RPPGHHA P PMGFC++GN+A+AA A G+ RV I+DFDVHHGNGT + FYD
Sbjct: 131 LCLVRPPGHHARPGEPMGFCLYGNIAVAAADAIHRLGMNRVLIVDFDVHHGNGTQEIFYD 190
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + FLS H+ YPGTG DE G G G G T N+PLP F + A
Sbjct: 191 DPAVAFLSIHRFPFYPGTGAADETGTGRGLGLTRNIPLPAHVSRADYHAAFRAELESLAD 250
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
R +P+L+L+SAG+DAH DP+ L + +L ++ +A+ R V LEGGYN+
Sbjct: 251 RIRPELVLISAGFDAHEEDPVGGLGLLEEDFEVLTRDLINVAETHAEGRIVSVLEGGYNI 310
Query: 276 NSLSYSVADSFRAF 289
+ L+ V R+
Sbjct: 311 SRLAGCVEVHLRSL 324
>gi|385331155|ref|YP_005885106.1| histone deacetylase superfamily protein [Marinobacter adhaerens
HP15]
gi|311694305|gb|ADP97178.1| histone deacetylase superfamily protein [Marinobacter adhaerens
HP15]
Length = 368
Score = 177 bits (448), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 3/188 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FALIRPPGHHA P GFC+ NVAIAA +AQ G +++ IID+D HHGNGT D F+
Sbjct: 144 FALIRPPGHHAEPVRARGFCLLNNVAIAAAHAQAKLGCEKILIIDWDAHHGNGTQDIFWA 203
Query: 156 DPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DPD+ F TH YPG+G ++E+G G GEG T+N+PLP +GD A VF E+++P A
Sbjct: 204 DPDVLFFDTHCAAPFYPGSGHLEEIGDGLGEGYTINVPLPETAGDVAFEKVFREILMPAA 263
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+PDL+LVSAG+D H D +L T + ++ ++ +A C R LEGGY+
Sbjct: 264 DYFQPDLVLVSAGFDPHRND--MALNLTYDGFKVITGIVQAIADKHCEGRLALVLEGGYS 321
Query: 275 LNSLSYSV 282
L+SLS V
Sbjct: 322 LSSLSKGV 329
>gi|296192102|ref|XP_002743921.1| PREDICTED: histone deacetylase 10 [Callithrix jacchus]
Length = 811
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 161/307 (52%), Gaps = 20/307 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + A GA + LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAVGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + GFAL+RPPGHH+ GFCVF NVAIAA +A++ HGL R+ I+D
Sbjct: 115 DAVLTGVVQN----GFALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKHGLHRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 171 WDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A++
Sbjct: 231 VGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
QL + L G R LEGGY+L SL+ SV + + LG+P A P + P
Sbjct: 287 QLLQVLAGGRVCAMLEGGYHLESLAESVCMTVQTLLGDP--APPLSGPMV----PCQSAL 340
Query: 315 QAIERVK 321
++I+ V+
Sbjct: 341 ESIQSVR 347
>gi|206889909|ref|YP_002248504.1| acetoin utilization protein [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741847|gb|ACI20904.1| acetoin utilization protein [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 304
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/291 (37%), Positives = 156/291 (53%), Gaps = 21/291 (7%)
Query: 3 LTSEFRGSEII-ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPT 59
+ + + EI +L + P A+ ++A VH Y+ + + S G I T
Sbjct: 31 IVNHLKNKEIWRKLLHIKPRKATEKELALVHEPHYIDKI-----KNSPAGYI----EPDT 81
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y + +++ + A GA + VD V D F +RPPGHHA MGFC+F N
Sbjct: 82 YLSEHSYEVACYAVGAVLQAVDGVL----NKDFDGVFCAVRPPGHHAEIDSAMGFCIFNN 137
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEV 179
+A+ A YA + G K++FI+D DVHHGNGT F DD +F+ S+HQ YPGTG+ E+
Sbjct: 138 IAVGAAYA-KTKGFKKIFIVDIDVHHGNGTQHIFEDDCSVFYFSSHQFPFYPGTGRELEM 196
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
GRG GEG T N+PL GSG TVF +++ + KP+LILVSAGYD H DP++ +
Sbjct: 197 GRGAGEGCTYNVPLRSGSGTKEYLTVFQDIMPQKIREVKPELILVSAGYDMHKDDPMSYI 256
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
TT + + I+ + K + +F LEGGYN L+ V + L
Sbjct: 257 NVTTEG---VRSIIRSILKSSYAPK-IFVLEGGYNAQVLAECVGVTLEEML 303
>gi|300721420|ref|YP_003710691.1| Histone deacetylase-like amidohydrolase [Xenorhabdus nematophila
ATCC 19061]
gi|297627908|emb|CBJ88454.1| Histone deacetylase-like amidohydrolase (HDAC-like amidohydrolase)
(HDAH) [Xenorhabdus nematophila ATCC 19061]
Length = 371
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 144/262 (54%), Gaps = 11/262 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+ L+N P + VH Y+ + D S GI+ GP + E +A
Sbjct: 63 LHLRNAEPLDDATLKLVHTEEYLQRFKSVSD--SGAGIL-----GPEASIGQGSYE-IAK 114
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG+ A ++ D ++L RPPGHH +P MGFC+ N+A+A +A+ G
Sbjct: 115 LSAGLTYAAVKAVLEDELDN--AYSLSRPPGHHCLPDQAMGFCLLANIALAIEHAKEKLG 172
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNL 191
+ RV ++D+DVHHGNGT F++ D+ +S HQDG YP G +++G G GEG +N+
Sbjct: 173 VGRVAVLDWDVHHGNGTQHIFWERDDVLTISLHQDGCYPEGYSGEEDIGAGKGEGFNINI 232
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G+G + ++++P QR++P+LI+V+ GYDA+ DPLA +Q + ++ +
Sbjct: 233 PLMAGAGHNSYLYAMDQIVLPALQRYQPELIIVACGYDANAYDPLARMQLHSDSFREMTR 292
Query: 252 NIKQLAKDLCGSRCVFFLEGGY 273
I+Q A +LC + V EGGY
Sbjct: 293 KIQQAADELCHGKLVMVHEGGY 314
>gi|358447847|ref|ZP_09158360.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
gi|357227972|gb|EHJ06424.1| histone deacetylase superfamily protein [Marinobacter manganoxydans
MnI7-9]
Length = 367
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 122/188 (64%), Gaps = 3/188 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FALIRPPGHHA P GFC+ NVAIAA +AQ G +++ IID+D HHGNGT D F+
Sbjct: 144 FALIRPPGHHAEPVRARGFCLLNNVAIAAAHAQAKLGCEKILIIDWDAHHGNGTQDIFWA 203
Query: 156 DPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DPD+ F TH YPG+G ++E+G G GEG T+N+PLP +GD A VF E+++P A
Sbjct: 204 DPDVLFFDTHCAAPFYPGSGHLEEIGDGLGEGYTINVPLPETAGDVAFEKVFREILMPAA 263
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+PDL+LVSAG+D H D +L T + ++ ++ +A C R LEGGY+
Sbjct: 264 DYFQPDLVLVSAGFDPHRND--MALNLTYDGFKVITGIVQAIADKHCEGRLALVLEGGYS 321
Query: 275 LNSLSYSV 282
L+SLS V
Sbjct: 322 LSSLSKGV 329
>gi|148260204|ref|YP_001234331.1| histone deacetylase superfamily protein [Acidiphilium cryptum JF-5]
gi|146401885|gb|ABQ30412.1| histone deacetylase superfamily [Acidiphilium cryptum JF-5]
Length = 309
Score = 176 bits (447), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/277 (39%), Positives = 154/277 (55%), Gaps = 13/277 (4%)
Query: 15 LKNFSPASVDD-IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
L+ +P + + + +VH AYV + AM A + + L T + + +L +A
Sbjct: 43 LREVAPEAPESALRAVHHDAYVDSI-LAMAPAEGEPVHL---DADTLMSHGSLAAALRSA 98
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G + VD+V R F RPPGHHA P MGFC+F N AIAA +A+ GL
Sbjct: 99 GGAMRAVDAVMEGWAR----AAFVATRPPGHHAEPNRAMGFCLFANAAIAAHHARAH-GL 153
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
KRV ++DFDVHHGNGT F D D+F+ S+HQ YPGTG+ E G G+ +N L
Sbjct: 154 KRVAVVDFDVHHGNGTQAMFETDADLFYASSHQYPCYPGTGRPSERGVA---GNIVNAAL 210
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
P GSG RT + + ++P +RF P+L+++SAG+DAH DPLA L T + L +
Sbjct: 211 PPGSGSAEFRTAWQDTLIPALERFAPELLIISAGFDAHRFDPLAELNVETADFAWLTEAL 270
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
++A CG + V LEGGY+L +L+ A RA +
Sbjct: 271 VRVADRHCGGKVVSLLEGGYDLEALAAGTAAHVRALM 307
>gi|317036036|ref|XP_001397497.2| histone deacetylase hda1 [Aspergillus niger CBS 513.88]
Length = 800
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
N A+ +I+ +H + + +E D + + I L Y TF S+ + G
Sbjct: 190 NARNATEAEISLIHTPDHFAFVESTKDMSDDELIALEHTRDSIYFNKLTFASSILSVGGA 249
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LK 134
I +VA K + A+IRPPGHHA MGFC+F NV++AAR Q G +
Sbjct: 250 IETCLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQNRLGDSCR 305
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTL 189
++ I+D+DVHHGNG AFYDDP+I ++S H QDG YPG G D G G G G +
Sbjct: 306 KILILDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGEEGDWDHCGEGPGVGRNV 365
Query: 190 NLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N+P P G GD F +V++P A F PDL++V++G+DA D L T Y
Sbjct: 366 NIPWPSQGMGDGDYMYAFQQVVMPIAHEFNPDLVIVASGFDAAAGDELGGCFVTPSCY-- 423
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY-E 307
A++ + L + LEGGYN S+S S + +G+P P L+
Sbjct: 424 --AHMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDP--------PDRLHTT 473
Query: 308 EPSAKVKQAIERVKHIHS 325
PSA + RV I S
Sbjct: 474 SPSALATTTVRRVMMIQS 491
>gi|71026484|ref|XP_762912.1| hypothetical protein [Theileria parva strain Muguga]
gi|68349864|gb|EAN30629.1| hypothetical protein TP03_0788 [Theileria parva]
Length = 900
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFAL+RPPGHHA P MGFC++ NVAIAARY Q GLKRV I+D+DVHHGNGT D FY
Sbjct: 216 GFALVRPPGHHATPDKMMGFCIYNNVAIAARYLQHKFGLKRVAIVDWDVHHGNGTQDIFY 275
Query: 155 DDPDIFFLSTH-----QDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
DD + F+S H +D YP TG DE+G G G +N+PL + + F++V
Sbjct: 276 DDNSVCFISLHRYGTDEDSFYPYTGYCDEIGVGKGSKYNVNIPLEKSFTNADLVHSFNKV 335
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
++P + F+P+ ILVSAG+D+ D L + + + +LA+ R + L
Sbjct: 336 VIPVLELFEPEFILVSAGFDSGRGDLLGGCRLDWEGFSWATFKLCELAEKYSKGRLLLSL 395
Query: 270 EGGYNLNSLSYSV 282
EGGY L+ LS V
Sbjct: 396 EGGYTLSRLSQDV 408
>gi|301612142|ref|XP_002935586.1| PREDICTED: histone deacetylase 5-like [Xenopus (Silurana) tropicalis]
Length = 1070
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/264 (40%), Positives = 150/264 (56%), Gaps = 24/264 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G+ I LV VAA + + GFA+IRPPGHHA MGFC F +VAIAA+ ++
Sbjct: 758 AVGSLIELVYKVAAGELKN----GFAVIRPPGHHAEESVAMGFCFFNSVAIAAKLLRQKM 813
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ R+ I+D+D+HHGNGT AFY+DP+I ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 814 NVGRILIVDWDIHHGNGTQQAFYNDPNILYISLHRYDDGNFFPGSGSSDEVGAGHGTGFN 873
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GD F V++P A+ F PD +LVSAG+DA + Q G
Sbjct: 874 VNIAWTGGVDPPVGDAEYLAAFRMVVMPVAKEFSPDFVLVSAGFDA-----VEGHQSPLG 928
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EPSKASEFD 300
Y + A L K L G + V LEGG++L ++ + A LG EP+ FD
Sbjct: 929 GYSVTAKCFGHLTKQLMTLAGGQVVLALEGGHDLTAICDASEACVSALLGMEPTP---FD 985
Query: 301 NPAILYEEPSAKVKQAIERVKHIH 324
N ++L + PS +ERV +IH
Sbjct: 986 N-SVLQQRPSDNAIATLERVINIH 1008
>gi|227540890|ref|ZP_03970939.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227183150|gb|EEI64122.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 381
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 153/278 (55%), Gaps = 22/278 (7%)
Query: 8 RGSEIIELKNFS---------PASVDDIASVHARAYVSGL--EKAMDRASQQGIILIEGS 56
R +E+I++ S P + +DI VH + + + + A+ + G +G+
Sbjct: 50 RLNELIQVSKLSREIQHMRAIPCTREDILRVHTEGHWNRMVEQSALPKGGDCG----DGA 105
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
P A ++ +AG I VD+V + +ALI PPGHHA MGFC+
Sbjct: 106 SPFGHNALDI--AVLSAGGAIVAVDAVLDGQ----VDRAYALINPPGHHACKDKGMGFCM 159
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGK 175
F N ++A +A + + +V I+D+DVHHGNGT D ++D+ ++ +S HQD +YP +G
Sbjct: 160 FNNSSVAVAHALERNDVSKVAIVDWDVHHGNGTQDIWWDNSNVLTISIHQDRNYPVNSGF 219
Query: 176 IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
+DE+G G G G +N+PLP GSGD A +++VP + F PDLI++S+GYDA ++DP
Sbjct: 220 VDEIGSGAGTGFNINIPLPPGSGDAAYCHAITDIVVPALEDFSPDLIVISSGYDAAMMDP 279
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
L + T + L + A+ LC + VF EGGY
Sbjct: 280 LGRMMVTAQGFNNLTRKMVSAAELLCDGKLVFIQEGGY 317
>gi|332265030|ref|XP_003281532.1| PREDICTED: histone deacetylase 10 [Nomascus leucogenys]
Length = 744
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 155/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH+ GFCVF NVAIAA +A++ +GL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAAHAKQKYGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ V DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAVGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>gi|358368190|dbj|GAA84807.1| histone deacetylase Hda1 [Aspergillus kawachii IFO 4308]
Length = 798
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
N A+ +I+ +H + + +E D + + I L Y TF S+ + G
Sbjct: 188 NARNATEAEISLIHTPDHFAFVESTKDMSDDELIALEHTRDSIYFNKLTFASSILSVGGA 247
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LK 134
I +VA K + A+IRPPGHHA MGFC+F NV++AAR Q G +
Sbjct: 248 IETCLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQNRLGDSCR 303
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTL 189
++ I+D+DVHHGNG AFYDDP+I ++S H QDG YPG G D G G G G +
Sbjct: 304 KILILDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGEEGDWDHCGEGPGVGRNV 363
Query: 190 NLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N+P P G GD F +V++P A F PDL++V++G+DA D L T Y
Sbjct: 364 NIPWPSQGMGDGDYMYAFQQVVMPIAHEFNPDLVIVASGFDAAAGDELGGCFVTPSCY-- 421
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY-E 307
A++ + L + LEGGYN S+S S + +G+P P L+
Sbjct: 422 --AHMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDP--------PDRLHTT 471
Query: 308 EPSAKVKQAIERVKHIHS 325
PSA + RV I S
Sbjct: 472 SPSALATTTVRRVMMIQS 489
>gi|242770238|ref|XP_002341938.1| histone deacetylase HdaA [Talaromyces stipitatus ATCC 10500]
gi|218725134|gb|EED24551.1| histone deacetylase HdaA [Talaromyces stipitatus ATCC 10500]
Length = 763
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 157/303 (51%), Gaps = 22/303 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
I+++N A+ +++ VH + + + + I+L E Y TF +L +
Sbjct: 169 IDVRN---ATKEEVELVHTDEHFQFVSDTQNLPDETLIMLEESRDSIYFNRLTFASALLS 225
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG I +VA K + A+IRPPGHHA MGFC+F NV+IAA+ QR G
Sbjct: 226 AGGAIETCLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSIAAKVCQRKLG 281
Query: 133 --LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGE 185
+++ I+D+DVHHGNG AFYD+P++ ++S H DG YPG G D VG G G
Sbjct: 282 EACRKILIVDWDVHHGNGIQKAFYDEPNVLYISLHVYADGKFYPGGKEGNWDAVGEGAGL 341
Query: 186 GSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G +N+P P G GD F +VI+P A F PDL++V++G+DA D L T
Sbjct: 342 GKNINIPWPSQGMGDGDYMFAFQQVIMPIASEFDPDLVIVASGFDAAAGDELGGCFVTPA 401
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS---KASEFDN 301
Y +++ + L + LEGGYN S+S S + +GEP A+ N
Sbjct: 402 CY----SHMTHMLMTLANGKVSVCLEGGYNFRSISKSALAVTKTLMGEPPARLAATMPSN 457
Query: 302 PAI 304
PA+
Sbjct: 458 PAV 460
>gi|121719281|ref|XP_001276342.1| histone deacetylase hda1 [Aspergillus clavatus NRRL 1]
gi|119404540|gb|EAW14916.1| histone deacetylase hda1 [Aspergillus clavatus NRRL 1]
Length = 805
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 148/281 (52%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++++ VH + + +E D + + I L Y TF +L + G I
Sbjct: 197 ATEEEVSLVHTPDHFAFVESTKDMSDDELIALEHTRDSIYFNKLTFASALLSTGGAIETC 256
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV++AAR Q+ G +++ I
Sbjct: 257 LAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQKQLGESCRKILI 312
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H QDG YPG G D G G G G +N+P
Sbjct: 313 VDWDVHHGNGIQKAFYDDPNVLYISLHVYQDGKYYPGGDEGDWDHCGAGAGLGRNVNIPW 372
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F +V++P AQ F PDL++V++G+DA D L T Y A+
Sbjct: 373 PSQGMGDGDYMYAFQQVVMPIAQEFNPDLVIVASGFDAAAGDELGGCFVTPPCY----AH 428
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ + L + LEGGYN S+S S + +G+P
Sbjct: 429 MTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDP 469
>gi|448532894|ref|ZP_21621314.1| histone deacetylase superfamily protein [Halorubrum hochstenium
ATCC 700873]
gi|445706128|gb|ELZ58013.1| histone deacetylase superfamily protein [Halorubrum hochstenium
ATCC 700873]
Length = 334
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 164/314 (52%), Gaps = 27/314 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYATATTFQE 68
+E PA + +VH YV LE + +G G T A+ T+
Sbjct: 38 VEYVEADPAEKAAVTAVHDAGYVDELES----------FVADGGGSWDPDTVASEGTWDA 87
Query: 69 SLAAAG-AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AG A A +++ + R P FA+ RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALTSAGLAQWAAREAIDGASGRQTP---FAIGRPPGHHAVTGDAMGFCFFNNAAVAAQTV 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
RV I D+DVHHGNGT D FYD D+F+ S H+DG YP TG +DE G G+GEG+
Sbjct: 145 LDEDLADRVAIFDWDVHHGNGTQDIFYDRGDVFYASIHEDGLYPDTGALDETGEGEGEGT 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T NLPL G+GD E + P RF PDL+LVSAG+DAH DP++ ++ ++ Y
Sbjct: 205 TANLPLAAGAGDADYLYAVDEAVAPAVDRFDPDLVLVSAGFDAHRHDPISRMRVSSEGYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L I+ LA + + LEGGY L++L+ V+ + G P E
Sbjct: 265 LLTDRIRTLAS-DADAADAYVLEGGYGLDTLAEGVSMVHETYDGR--------TPVDTDE 315
Query: 308 EPSAKVKQAIERVK 321
EP K + ++ ++
Sbjct: 316 EPDEKTEALVDDLR 329
>gi|350633406|gb|EHA21771.1| histone deacetylase [Aspergillus niger ATCC 1015]
Length = 800
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 157/318 (49%), Gaps = 25/318 (7%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
N A+ +I+ +H + + +E D + + I L Y TF S+ + G
Sbjct: 190 NARNATEAEISLIHTPDHFAFVESTKDMSDDELIALEHTRDSIYFNKLTFASSILSVGGA 249
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LK 134
I +VA K + A+IRPPGHHA MGFC+F NV++AAR Q G +
Sbjct: 250 IETCLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQNRLGDSCR 305
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTL 189
++ I+D+DVHHGNG AFYDDP+I ++S H QDG YPG G D G G G G +
Sbjct: 306 KILILDWDVHHGNGIQKAFYDDPNILYISLHVYQDGKFYPGGEEGDWDHCGEGPGVGRNV 365
Query: 190 NLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N+P P G GD F +V++P A F PDL++V++G+DA D L T Y
Sbjct: 366 NIPWPSQGMGDGDYMYAFQQVVMPIAHEFNPDLVIVASGFDAAAGDELGGCFVTPSCY-- 423
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY-E 307
A++ + L + LEGGYN S+S S + +G+P P L+
Sbjct: 424 --AHMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDP--------PDRLHTT 473
Query: 308 EPSAKVKQAIERVKHIHS 325
PSA + RV I S
Sbjct: 474 SPSALATTTVRRVMMIQS 491
>gi|227489300|ref|ZP_03919616.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227090673|gb|EEI25985.1| histone deacetylase superfamily protein [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 381
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 153/278 (55%), Gaps = 22/278 (7%)
Query: 8 RGSEIIELKNFS---------PASVDDIASVHARAYVSGL--EKAMDRASQQGIILIEGS 56
R +E+I++ S P + +DI VH + + + + A+ + G +G+
Sbjct: 50 RLNELIQVSKLSREIQHMRAIPCTREDILRVHTEGHWNRMVEQSALPKGGDCG----DGA 105
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
P A L+A GA +A+ + +R +ALI PPGHHA MGFC+
Sbjct: 106 SPLGHNALDIA-VLSAGGAMVAVDAVLDGQVDR-----AYALINPPGHHACKDKGMGFCM 159
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGK 175
F N ++A +A + + +V I+D+DVHHGNGT D ++D+ ++ +S HQD +YP +G
Sbjct: 160 FNNSSVAVAHALERNDVSKVAIVDWDVHHGNGTQDIWWDNSNVLTISIHQDRNYPVNSGF 219
Query: 176 IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
+DE+G G G G +N+PLP GSGD A +++VP + F PDLI++S+GYDA ++DP
Sbjct: 220 VDEIGSGAGTGFNINIPLPPGSGDAAYCHAITDIVVPALEDFSPDLIVISSGYDAAMMDP 279
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
L + T + L + A+ LC + VF EGGY
Sbjct: 280 LGRMMVTAQGFNNLTRKMVSAAELLCDGKLVFIQEGGY 317
>gi|392412457|ref|YP_006449064.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
gi|390625593|gb|AFM26800.1| deacetylase, histone deacetylase/acetoin utilization protein
[Desulfomonile tiedjei DSM 6799]
Length = 345
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 147/272 (54%), Gaps = 10/272 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+++ + VH Y+ ++ M A ++ L + T +A T+ + A G + +
Sbjct: 51 ATLEQLELVHTPQYI---KQIMSTAGKEFTNL---APDTPVSANTYLAAWLAVGGCLKAL 104
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+++ + R F L+RPPGHHA+ GFC+F N+ + A+YA +GLKR+ I+D
Sbjct: 105 EALMEGRFRA----CFCLVRPPGHHALTDRAGGFCIFNNLGVTAKYAIETYGLKRILIVD 160
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+D+HHGN D FY + + + S+H G YP TG DE G +G G +NLP+P D
Sbjct: 161 WDIHHGNALQDLFYGENRVLYFSSHYRGWYPHTGDWDEFGESEGLGYNVNLPVPKEMTDN 220
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ V+ E++ +R+KP+LIL++AG+DAH DPL + + Y L I Q +
Sbjct: 221 DIIHVYRELVGRIVRRWKPELILIAAGFDAHEKDPLGRTRLSENAYGWLMQMILQFSDAA 280
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + LEGGY+L +L SV + R E
Sbjct: 281 KSAPILLSLEGGYDLWALVSSVREVLRVLTFE 312
>gi|410624494|ref|ZP_11335291.1| histone deacetylase 5 [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410156001|dbj|GAC30665.1| histone deacetylase 5 [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 373
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/275 (35%), Positives = 143/275 (52%), Gaps = 12/275 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +I VH Y++ L + G T + + + AAG + L
Sbjct: 66 ASDAEILKVHTPRYLNQLVELNKTGGDAGPF-------TPMSVNSLDIARLAAGGVMELT 118
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+V + + G+AL+RPPGHHA+ G MGFC+ N AI+A +A LK++ +D
Sbjct: 119 SAVVKRQVKN----GYALVRPPGHHAVADGGMGFCLLNNAAISAHHALDNLNLKKIAFVD 174
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
+DVHHGNG FY+DP + +S HQ+ + P TG ++G G+G G LN+PLP G+G
Sbjct: 175 WDVHHGNGAESIFYEDPRVLTISVHQERCFPPDTGDNQDIGSGEGRGFNLNIPLPAGTGL 234
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
F V++P +F PDLI+V +G+DA + DPL T+ Y L + + A +
Sbjct: 235 GGYLACFERVVLPALYKFSPDLIIVPSGFDAGIYDPLGRQMMTSSGYRRLTHMLLKAADE 294
Query: 260 LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
LC R V EGGYN +++ Y A GE S
Sbjct: 295 LCDGRLVMCHEGGYNPSTVPYHGLAVLEALSGEDS 329
>gi|167719111|ref|ZP_02402347.1| histone deacetylase family, putative [Burkholderia pseudomallei
DM98]
Length = 369
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + PMGFC+ N+ IA A+ H ++RV +ID+DVHHGNGT +YD
Sbjct: 134 FSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYD 193
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP+ +S HQD + PG DE G G G G+ +N+PL G+GD A R F +++P
Sbjct: 194 DPNTLTISLHQDRCFPPGYSGADERGAGTGTGANVNVPLLAGAGDDAYRYAFERIVLPAL 253
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P+L++V++G DA+ +DPLA +Q + +Y + +KQ A+ CG R V EGGY+
Sbjct: 254 DAFRPELVIVASGLDANAVDPLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYS 313
>gi|397170897|ref|ZP_10494307.1| histone deacetylase/AcuC/AphA family protein [Alishewanella
aestuarii B11]
gi|396087371|gb|EJI84971.1| histone deacetylase/AcuC/AphA family protein [Alishewanella
aestuarii B11]
Length = 305
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 143/279 (51%), Gaps = 15/279 (5%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ ++ + A+ + + H + YV L +A +G I ++ T + +L
Sbjct: 42 VVMQRDATAATKEALYLAHGKLYVDEL---FAKAPSEGHIWLDPD--TIMGPKSLNAALH 96
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG+GI VD V A N F +RPPGHHA + MGFC+ N+AIAA +A +
Sbjct: 97 AAGSGINAVDQVMAGSNEQ----AFCAVRPPGHHATREQAMGFCLLNNIAIAAEHALNQY 152
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
L R+ I+DFDVHHGNGT D F +P + F S+ + YP TG + E +NL
Sbjct: 153 QLSRIAIVDFDVHHGNGTEDIFQHEPRVLFCSSFEHPLYPYTG-----AETNNE-HIINL 206
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL GG TA R + +P RF P LIL+SAG+D H D +A Y +A
Sbjct: 207 PLAGGCRGTAWREQVKQHWLPAIDRFAPQLILISAGFDGHAEDEMAHFMLREEDYQWIAT 266
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+KQLA C R V LEGGY L++L SV + L
Sbjct: 267 ELKQLADKHCQGRIVAMLEGGYALSALGRSVVAFLKGLL 305
>gi|268551831|ref|XP_002633897.1| Hypothetical protein CBG19959 [Caenorhabditis briggsae]
Length = 935
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 151/282 (53%), Gaps = 21/282 (7%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQES 69
+ IE A+ D+I VH + + L++ ++ + E Y T + + +
Sbjct: 455 KCIERNTERIATDDEIRMVHTKKMLDHLKQTETMKDEELMEEAENEFNSIYLTRDSLKVA 514
Query: 70 LAAAGAGIALVDSV----AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
A GA + +D + A +N ++RPPGHHA GFC+F NVA+AA+
Sbjct: 515 RKAVGACLQSIDEIYKKPAGQRN------ALVIVRPPGHHASASKSSGFCIFNNVAVAAK 568
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EVG 180
YAQR H KRV I+D+DVHHGNGT + FY+DP + ++S H+ YP D +VG
Sbjct: 569 YAQRHHRAKRVLILDWDVHHGNGTQEIFYEDPSVMYMSIHRHDKGNFYPIGEPKDYFDVG 628
Query: 181 RGDGEGSTLNLPLPGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
GEG+++N+P G GD + F VI+P A +F PDL+++SAG+DA + DPL
Sbjct: 629 ESAGEGTSVNVPFSGAPMGDLEYQMAFQRVIMPIAYQFNPDLVIISAGFDAAIDDPLGEY 688
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ T T+ + + LA R + LEGGYNL S+S S
Sbjct: 689 KVTPETFAWMTYQLSSLA----AGRIITVLEGGYNLTSISNS 726
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 53 IEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPM 112
I Y + + S+ A G+A V + + GFA+IRPPGHHA P
Sbjct: 81 INSQCENYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVIRPPGHHADSASPC 140
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--- 169
GFC+F NVA AA A + G +R+ I+D DVHHG GT FY+D +F+ S H+
Sbjct: 141 GFCLFNNVAQAAEEAFFS-GAERILIVDLDVHHGQGTQRIFYEDKRVFYFSIHRHEHGLF 199
Query: 170 YPG--TGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSA 226
+P D +G G G G N+PL G D+ ++ V++P A +F P +++SA
Sbjct: 200 WPHLPESDFDHIGAGLGVGYNANVPLNETGCTDSDYLSILFHVLMPLATQFDPHFVIISA 259
Query: 227 GYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSF 286
G+D+ DP+ +Q T Y ++K LA+ R + LEGGYN + +
Sbjct: 260 GFDSLRGDPIGGMQLTPDGYSHFLYHLKSLAQ----GRMLVVLEGGYNHQMSAVAAQKCV 315
Query: 287 RAFLGEPSKASEFDNP 302
R LG ++ +P
Sbjct: 316 RVLLGHAPFPAQVKDP 331
>gi|339322715|ref|YP_004681609.1| histone deacetylase superfamily protein [Cupriavidus necator N-1]
gi|338169323|gb|AEI80377.1| histone deacetylase superfamily [Cupriavidus necator N-1]
Length = 314
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 154/278 (55%), Gaps = 11/278 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E ++ +V+ + +H Y+ + ++ A QG + ++ +G T + +++ +
Sbjct: 43 LEWRDAPMGTVEQLQLIHDLHYIDEIAQS---APTQGYVPLD-AGDTIMSPGSWEAVMRC 98
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA A VD+V + R F RP GHHA P MGFC+F AIAA YA H
Sbjct: 99 VGAACAGVDAVMDGQARN----VFCATRPCGHHAEPAKAMGFCIFNQAAIAAAYAYEVHK 154
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+RV ++DFDVHHGNGT AF+D P++F+ S+HQ YPGTG E G + +N+P
Sbjct: 155 LERVAVVDFDVHHGNGTQAAFFDRPELFYASSHQSPFYPGTGARSETGVNH---NIVNVP 211
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G R +++P + F P++++VSAG+DAH LDPLA + ++ +
Sbjct: 212 LPRGCEPAQFRAAISALVLPSLRAFAPEILIVSAGFDAHRLDPLAGMNLEDSDFHWITKE 271
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ Q+A + C R V LEGGY+L++L+ S A +
Sbjct: 272 LMQIADETCDGRIVSILEGGYSLDALATSAMAHVSALM 309
>gi|365991928|ref|XP_003672792.1| hypothetical protein NDAI_0L00640 [Naumovozyma dairenensis CBS 421]
gi|410729811|ref|XP_003671084.2| hypothetical protein NDAI_0G00650 [Naumovozyma dairenensis CBS 421]
gi|401779903|emb|CCD25841.2| hypothetical protein NDAI_0G00650 [Naumovozyma dairenensis CBS 421]
Length = 689
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/313 (32%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH++ ++ +E +Q + E Y + ++ + G I
Sbjct: 109 ATSEEILEVHSKEHLDFIESTSKMNREQLLKATESGDSVYFNSDSYASAKLPVGGAIEAC 168
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVAIAA+ + + ++++ I
Sbjct: 169 KAVVEGRVKN----ALAVVRPPGHHAEPEAAGGFCLFSNVAIAAKNILKNYPESVRKILI 224
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFYDD I ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 225 LDWDIHHGNGTQKAFYDDDRILYVSLHRFKMGKYYPGTIHGRYDQTGEGKGEGFNCNITW 284
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F ++++P + F+PDL+++SAG+DA D + T Y +
Sbjct: 285 PVGGVGDAEYMWAFEQIVMPMGREFQPDLVIISAGFDAADGDTIGQCHVTPSCYGHMTHM 344
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ V LEGGYNL+S++ S + +GEP D + +P +
Sbjct: 345 LKSLAR---GNMAV-VLEGGYNLDSIAISALSVAKILIGEPP-----DELPDVTRDPKPE 395
Query: 313 VKQAIERVKHIHS 325
V + I++V I S
Sbjct: 396 VIEMIDKVLRIQS 408
>gi|410906265|ref|XP_003966612.1| PREDICTED: histone deacetylase 4-like [Takifugu rubripes]
Length = 1059
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/328 (34%), Positives = 174/328 (53%), Gaps = 37/328 (11%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQE------S 69
A+++++ +VH+ A+V + L + +D + + + G + T + E +
Sbjct: 686 ATLEELQTVHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGIGVDSDTIWNEVHSSSAA 745
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G+ + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 746 RLAVGSVVELVFKVATQELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 801
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFYDDP + +LS H+ DG+ +PG+G DEVG G G G
Sbjct: 802 RLNINKILIVDWDVHHGNGTQQAFYDDPSVLYLSIHRYDDGNFFPGSGAPDEVGSGPGVG 861
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG D F V++P A F PD++LVS+G+DA H PL
Sbjct: 862 FNVNVAFTGGLEPPMSDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHP-PPLGGY 920
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
T + L + LA G R V LEGG++L ++ + A LG+ E
Sbjct: 921 TLTAKCFGYLTRQLMTLA----GGRLVLALEGGHDLTAICDASEACLAALLGQ-----EL 971
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D ++L + P+ +++E+V IHS
Sbjct: 972 DPLPKSVLEQRPNVNAVRSLEKVLEIHS 999
>gi|304393480|ref|ZP_07375408.1| type-2 histone deacetylase 1 [Ahrensia sp. R2A130]
gi|303294487|gb|EFL88859.1| type-2 histone deacetylase 1 [Ahrensia sp. R2A130]
Length = 308
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 146/279 (52%), Gaps = 15/279 (5%)
Query: 14 ELKNFSPASVDD--IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+L F D+ + H+ +YV GL + +GI I+ T + +++
Sbjct: 41 DLVRFETTMADEAVFETAHSASYVEGLRAQI---PDEGIARIDPD--TVMSPKSWECVRH 95
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G G+A V++V + K F RPPGHHA MGFC A+ AR+AQ H
Sbjct: 96 AVGGGLAAVEAVMSGKADN----AFLAARPPGHHAEQVTAMGFCFINTAAVMARHAQLHH 151
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
G +RV I+DFDVHHGNGT D F D +F+ STHQ +PGTG E +G G+ N
Sbjct: 152 GAERVAIVDFDVHHGNGTQDIFERDKSVFYASTHQMPLFPGTGAKGE----EGVGNICNA 207
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G+G R F ++P F PDLI++SAG+DAH DPLA++ + + + A
Sbjct: 208 PLQPGAGTEDFRDAFRSRVLPALNAFAPDLIIISAGFDAHARDPLANVNLSAHDFDWVTA 267
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ A+ C +R V LEGGY+L L+ S A + +
Sbjct: 268 ELMSSAERHCSNRVVALLEGGYDLQGLAESCAAHVKRLM 306
>gi|116175247|ref|NP_001034447.2| histone deacetylase 4 [Danio rerio]
gi|115528766|gb|AAI24584.1| Zgc:152701 [Danio rerio]
gi|182889818|gb|AAI65681.1| Zgc:152701 protein [Danio rerio]
Length = 1023
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 177/328 (53%), Gaps = 37/328 (11%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
A+++++ +VH+ A+V + L + +D + + + G + T + E +++ A
Sbjct: 651 ATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAA 710
Query: 76 GIA------LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A LV VA+ + R GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 711 RLAVGSVVDLVFKVASGELRN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 766
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP++ +LS H+ DG+ +PG+G DEVG G G G
Sbjct: 767 RLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPDEVGIGPGVG 826
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 827 FNVNMAFTGGLEPPMGDADYLAAFRSVVMPIANEFSPDVVLVSSGFDAVEGHP-PPLGGY 885
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ T + L + LA G R V LEGG++L ++ + A LG +E
Sbjct: 886 KLTAKCFGYLTKQLMGLA----GGRLVLALEGGHDLTAICDASEACVSALLG-----NEL 936
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D IL + P+A Q++E+V + S
Sbjct: 937 DPIPEDILQQRPNANAIQSMEKVLEVQS 964
>gi|149174219|ref|ZP_01852846.1| histone deacetylase/AcuC/AphA family protein [Planctomyces maris
DSM 8797]
gi|148846764|gb|EDL61100.1| histone deacetylase/AcuC/AphA family protein [Planctomyces maris
DSM 8797]
Length = 310
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 137/262 (52%), Gaps = 6/262 (2%)
Query: 27 ASVHARAYVSGLEKAMDRA-SQQGIILI-----EGSGPTYATATTFQESLAAAGAGIALV 80
A R++ + ++R SQQ I + +G G +ES A + V
Sbjct: 39 AHCRQRSWNEVTDTVLERVHSQQYIRFVKEFCEQGGGHISEDTVVCRESYGVARKAVGAV 98
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ F L+RPPGHHA P+ +GFCVF NVA+ AR A + GL+RV I+D
Sbjct: 99 CDAVEQIVQDKAERAFCLVRPPGHHAAPESALGFCVFNNVAVGARLAIKELGLERVLIVD 158
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
+DVHHG+GT + F++D + FLS H+ Y TG E G G G G+T+N+P+ G+
Sbjct: 159 WDVHHGDGTQEIFWEDGQVGFLSIHRSSFYQNTGTAAETGAGKGLGTTMNVPVESGTSRE 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+F + A R +P L+L+SAG+DAH DP+ SL + Y L + ++AK
Sbjct: 219 HYCELFTAAVEQMAARIRPQLVLISAGFDAHKDDPIGSLGLESEDYARLTRVVLEIAKTH 278
Query: 261 CGSRCVFFLEGGYNLNSLSYSV 282
R V LEGGYN +L+ +
Sbjct: 279 ANGRVVSVLEGGYNPGALAECI 300
>gi|115443266|ref|XP_001218440.1| histone deacetylase clr3 [Aspergillus terreus NIH2624]
gi|114188309|gb|EAU30009.1| histone deacetylase clr3 [Aspergillus terreus NIH2624]
Length = 760
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 158/318 (49%), Gaps = 25/318 (7%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
N A+ ++I+ VH + + +E D ++ I L Y TF SL + G
Sbjct: 183 NARNATEEEISLVHTPDHYAFVESTKDMTDEELIALEHTRDSIYFNKLTFASSLLSVGGA 242
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LK 134
I +VA K + A+IRPPGHHA MGFC+F NV++AAR Q G +
Sbjct: 243 IETCLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQNQLGESCR 298
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTL 189
++ I+D+DVHHGNG AFYDDP++ ++S H Q+G YPG G D G G G G +
Sbjct: 299 KIMILDWDVHHGNGIQKAFYDDPNVLYISLHVYQEGRFYPGGDEGDWDHCGTGAGVGRNV 358
Query: 190 NLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N+P G GD F +V++P AQ F PDL+++++G+DA V D L T Y
Sbjct: 359 NIPWKTQGMGDGDYMYAFQQVVMPIAQEFNPDLVIIASGFDAAVGDELGGCFVTPACY-- 416
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE- 307
A++ + L + LEGGYN S+S S + +G+P P LY
Sbjct: 417 --AHMTHMLMTLANGKVAVCLEGGYNFRSISKSSLAVTKTLMGDP--------PDRLYST 466
Query: 308 EPSAKVKQAIERVKHIHS 325
PS + +V I S
Sbjct: 467 TPSEDATSVVRQVMMIQS 484
>gi|324504135|gb|ADY41786.1| Histone deacetylase 6 [Ascaris suum]
Length = 572
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 145/265 (54%), Gaps = 10/265 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D++ VH A++ +E + + + S Y +F+ S+AA G+ + V
Sbjct: 191 ATYDELRLVHQLAHIKHMEAIAEVDESERRREEDHSNSMYFCKESFRASIAAVGSILECV 250
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + + FALIRPPGHHA P GFC+F NVAIAA+YA +GL+R+ I+D
Sbjct: 251 DAVLDEERKERARNAFALIRPPGHHATPSQAAGFCIFNNVAIAAKYAMEKYGLERILIVD 310
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGT--GKIDEVGRGDGEGSTLNLPLPG 195
+DVHHGNG + FY DP + ++S H+ DG YP +++ G G G G ++N+P
Sbjct: 311 WDVHHGNGIQEIFYSDPHVLYISLHRHDDGLFYPANEPKDVEDGGEGAGLGYSINIPFSH 370
Query: 196 GS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D R F +V++P A + P L++VS+G+DA D L + + Y L +
Sbjct: 371 GRMSDNDYRMAFTKVVMPIAYEYSPQLVIVSSGFDAAYGDILGGYELSAQCYAQLTYQLG 430
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLS 279
LAK R + LEGGY+L L
Sbjct: 431 ALAK----GRIIVALEGGYSLTVLQ 451
>gi|83953364|ref|ZP_00962086.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. NAS-14.1]
gi|83842332|gb|EAP81500.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. NAS-14.1]
Length = 368
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 153/263 (58%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ +PA+ DD+ VH AY+ ++ D E T A F+ + +
Sbjct: 60 LDLRSAAPATRDDLLRVHPAAYLDDFKRLSDAGGG------ELGLRTPFAAGGFEIAALS 113
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA V++VA + D +AL RPPGHHA+P P GFC+ N+AIA A+
Sbjct: 114 AGLSIAAVEAVA----KGDLDNAYALSRPPGHHALPDFPNGFCLLANIAIAIEAAKAKGL 169
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT FYD D+ +S HQ+G+YP TG + + G G G G +NL
Sbjct: 170 VRRVAVLDWDVHHGNGTEAIFYDRDDVLTISLHQEGNYPLDTGALADRGNGAGAGYNINL 229
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P+ GSG TA V++P ++PD+I+V+ G+DA ++DPLA +Q T T+ +
Sbjct: 230 PMHAGSGHTAYLHALDRVVLPALDAYQPDMIIVACGFDASIVDPLARMQATAETFAEMTQ 289
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
IK A+ LCG + V EGGY+
Sbjct: 290 RIKAAAQKLCGGKLVLVHEGGYS 312
>gi|354494990|ref|XP_003509615.1| PREDICTED: histone deacetylase 10-like [Cricetulus griseus]
Length = 678
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/282 (36%), Positives = 159/282 (56%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ +++ A ++ + + Y +TF + A GA + LV
Sbjct: 55 ASEEELGLVHSPEYIALVQRTQTLAKEELQEMSKQFDAVYFHPSTFHCARLAVGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVAIAA++A++ +GL+R+ I
Sbjct: 115 DAVLTGAVHN------GLALVRPPGHHSQKAAANGFCVFNNVAIAAKHAKQKYGLQRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGEGSTLNLPL 193
+D+D+HHG G F DDP + + S H+ +P + D VG+G G+G T+NLP
Sbjct: 169 VDWDIHHGQGIQYIFDDDPSVLYFSWHRYEHGRFWPFLQESDACAVGQGQGQGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 285 LIQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 326
>gi|73538432|ref|YP_298799.1| histone deacetylase superfamily protein [Ralstonia eutropha JMP134]
gi|72121769|gb|AAZ63955.1| Histone deacetylase superfamily [Ralstonia eutropha JMP134]
Length = 314
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 150/269 (55%), Gaps = 11/269 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E ++ +V+ + +H Y+ + + RA G + ++ +G T + +++ +
Sbjct: 43 LEWRDAPMGTVEQLQLIHDTDYIDEIAQ---RAPTHGYVPLD-AGDTVMSPGSWEAVMRC 98
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA A VD+V R F RP GHHA P MGFC+F AIAA YA H
Sbjct: 99 VGAACAGVDTVMNGDARN----VFCATRPCGHHAEPAKAMGFCIFNQAAIAAAYACEVHK 154
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+RV ++DFDVHHGNGT AF++ P++F+ S+HQ YPGTG E G + +N+P
Sbjct: 155 LERVAVVDFDVHHGNGTQAAFFNRPELFYASSHQSPFYPGTGARSETGVNH---NIVNVP 211
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G R +++P + F PDL+++SAG+DAH LDPLA + ++ +
Sbjct: 212 LPRGCESAQFRAAISALVLPSLRAFAPDLLIISAGFDAHRLDPLAGMNLEDSDFHWITRE 271
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ Q+A + C R V LEGGY+L++L+ S
Sbjct: 272 LMQIADEACNGRIVSILEGGYSLDALATS 300
>gi|159483631|ref|XP_001699864.1| histone deacetylase [Chlamydomonas reinhardtii]
gi|158281806|gb|EDP07560.1| histone deacetylase [Chlamydomonas reinhardtii]
Length = 384
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 164/264 (62%), Gaps = 10/264 (3%)
Query: 14 ELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+L++ P A+ +++A VH AY+S + K M +G G T+A SLA
Sbjct: 59 QLQHLKPRHATEEELARVHDPAYISRV-KEMSADESKGH-HTAGDVATFAPGGYEIASLA 116
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A GA +A ++V + R +AL+RPPGHHA MGFC+F NVA+AA +A AH
Sbjct: 117 AGGAIVA-TEAVLRGELRN----AYALVRPPGHHAERDHGMGFCIFNNVAVAAAHALAAH 171
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GLKRV I+DFDVHHGNGT F DP + F+S HQD +YP +G + E G G+GEG+T+N
Sbjct: 172 GLKRVAIVDFDVHHGNGTQHIFESDPRVLFISVHQDSNYPLRSGYVTETGTGEGEGATIN 231
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP GSG A + F V++P + ++P+L+LVSAGYDA +D LA++ ++ + +
Sbjct: 232 VPLPPGSGSGAYKAAFERVVLPALEAYRPELLLVSAGYDASYMDMLAAMILSSADFGWMM 291
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
A +K A+ LCG R V EGGY+
Sbjct: 292 AQLKAAAERLCGGRLVALHEGGYS 315
>gi|449674033|ref|XP_002162568.2| PREDICTED: histone deacetylase 6-like [Hydra magnipapillata]
Length = 367
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/290 (35%), Positives = 150/290 (51%), Gaps = 28/290 (9%)
Query: 20 PASVDDIASVHARAYVSGLEKA--------------MDRASQQGIILIEGSGPTYATATT 65
PA++ +++ VH YV+ L+ A + + + +Y T
Sbjct: 59 PATISELSLVHDEEYVNRLKNAKITDHESIFAKFDLIKDIKVENLQFENDKWDSYIHEKT 118
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
++ +L +AG+ + L ++V N D GFALIRPPGHHA GFC F NVAIAAR
Sbjct: 119 YETALLSAGSALQLTEAVL--NNVIDS--GFALIRPPGHHAEACYAAGFCYFNNVAIAAR 174
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG--TGKIDEVGRGD 183
YAQ G K++ I+D+D+HHGNG D FYDD + ++S H+ +YP K + +G
Sbjct: 175 YAQ-LQGAKKILIVDWDIHHGNGIQDMFYDDDSVLYISLHRYYTYPDLEKAKAEYIGEKK 233
Query: 184 GEGSTLNLPLPGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+ G+ + F EV++P A++F PDLILVS G+DA DPL +
Sbjct: 234 GLGFNINIAWDETPMGECEYKLAFEEVVLPVARKFAPDLILVSCGFDAARGDPLGEFDVS 293
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
TY + + ++ S+ FLEGGYN +L V + LGE
Sbjct: 294 INTYSWMTTRLLEI------SKTALFLEGGYNNENLCNGVYAVIMSLLGE 337
>gi|148222822|ref|NP_001080486.1| histone deacetylase 6 [Xenopus laevis]
gi|27882614|gb|AAH43813.1| Hdac6-prov protein [Xenopus laevis]
Length = 1286
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/307 (34%), Positives = 156/307 (50%), Gaps = 19/307 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++ H+ +Y+ +E + + L + Y + ++ + AAG+ +V
Sbjct: 532 ATQKELQMCHSLSYIQKIEASAHMKPRDLHRLGDEYNSIYINSKSYHSARLAAGSTFNVV 591
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK----RV 136
++V K + G ++RPPGHHA P GFC F VA+AARYAQR RV
Sbjct: 592 EAVVTGKAQN----GIGIVRPPGHHAEPGEACGFCFFNTVALAARYAQRLQSQSEDPLRV 647
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--GKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F +D + ++S H+ +P + D+VG G G G +N+
Sbjct: 648 MILDWDVHHGNGTQHIFQEDASVLYMSLHRYDEGLFFPNSEDASHDKVGIGKGAGYNVNI 707
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P GG GD FH V++P A F P L+L+SAG+DA DPL Q + Y
Sbjct: 708 PWNGGKMGDVEYLMAFHRVVMPIAYEFNPQLVLISAGFDAARGDPLGGCQVSPEGY---- 763
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKA-SEFDNPAILYEEP 309
A++ L L G R + LEGGYNL S+S S+ R+ LG+P S+ P
Sbjct: 764 AHMTHLLMSLAGGRVILVLEGGYNLTSISESMVMCTRSLLGDPPPVLSDLRPPKSSALNS 823
Query: 310 SAKVKQA 316
KV+QA
Sbjct: 824 VCKVRQA 830
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 138/279 (49%), Gaps = 14/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++I +H+ YV+ + + L + Y T+F + A G+ + LV
Sbjct: 131 ASEEEILLIHSPQYVALMRSTQKMTMDELRALSDRYDSVYLHPTSFTCASLAVGSVLQLV 190
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + R G A++RPPGHHA G+C+F +AIAARYAQ +G KRV I+D
Sbjct: 191 DRVQHGEIRN----GLAVVRPPGHHAHTDQMNGYCMFNQLAIAARYAQLTYGAKRVLIVD 246
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
+DVHHG GT F DP + + S H+ G +P + G G N+ +
Sbjct: 247 WDVHHGQGTQFIFESDPSVLYFSVHRYDNGGFWPHLKESASSAVGKERGERFNVNVAWNK 306
Query: 198 ---GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
D VF V++P A F+P L+LV+AG+D+ V DP + T + +++
Sbjct: 307 TRMSDADYIHVFLNVLLPVAYEFQPHLVLVAAGFDSVVGDPKGEMSATPACF----SHLT 362
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
L L R + LEGGYN SL+ S +A LG+P
Sbjct: 363 HLLMSLAQGRLILSLEGGYNQRSLAEGACASLKALLGDP 401
>gi|328953923|ref|YP_004371257.1| histone deacetylase superfamily protein [Desulfobacca acetoxidans
DSM 11109]
gi|328454247|gb|AEB10076.1| histone deacetylase superfamily [Desulfobacca acetoxidans DSM
11109]
Length = 316
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/273 (35%), Positives = 138/273 (50%), Gaps = 15/273 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS+ I +H Y+ A QQG ++ + +F + A G A
Sbjct: 52 ASLAWIERLHDHRYIERFRTA----CQQGQPFLDET-ENGICRESFNIARLAVGGVFAAC 106
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D++ A N F +RP GHHA GFC F NVA+ A+Y Q +GL R+ I
Sbjct: 107 DAMMHGAVNN------AFCAVRPAGHHAERAQARGFCFFNNVALGAKYLQEKYGLARIAI 160
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGSTLNLPLPGG 196
+D+D HHGNGT +DP + F+S H+ YPGTG E G+G+G G TLN P P
Sbjct: 161 VDWDAHHGNGTQHLLEEDPTVLFISLHESPGTCYPGTGWESERGKGEGFGYTLNFPFPAY 220
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
S D V E ++P + F+PD +++SAG+D H DP++ L+ + Y ++ A +
Sbjct: 221 SRDPDYLEVMDEEVLPALEEFRPDCLMISAGFDGHARDPMSRLRLSDKAYMIMGALLLTF 280
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
A+D C R + LEGGYNL L V D R
Sbjct: 281 ARDFCQGRIISVLEGGYNLEVLEDCVFDHIRVL 313
>gi|326665916|ref|XP_685659.4| PREDICTED: histone deacetylase 5-like [Danio rerio]
Length = 1100
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 150/267 (56%), Gaps = 28/267 (10%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I L VAA + + GFA++RPPGHHA MGFC F +VAI A+ Q+
Sbjct: 785 AVGCVIELAFKVAAGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 840
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
G+ ++ IID+D+HHGNGT AFY+DP++ ++S H+ DG+ +PG+G +EVG G GEG
Sbjct: 841 GVGKILIIDWDIHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPEEVGVGPGEGFN 900
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H PL
Sbjct: 901 VNIAWTGGVEPPMGDVEYLTAFRTVVMPIANEFSPDVVLVSAGFDAVEGHQ-SPLGGYNV 959
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L KQL K L G R V LEGG++L ++ + A LG+ E N
Sbjct: 960 TAKCFGHLT---KQLMK-LAGGRVVLALEGGHDLTAICDASESCVEALLGD-----EL-N 1009
Query: 302 P---AILYEEPSAKVKQAIERVKHIHS 325
P +L ++P K ++ERV I S
Sbjct: 1010 PLPLTVLQQKPCPKATASLERVIEIQS 1036
>gi|428304597|ref|YP_007141422.1| histone deacetylase superfamily protein [Crinalium epipsammum PCC
9333]
gi|428246132|gb|AFZ11912.1| histone deacetylase superfamily [Crinalium epipsammum PCC 9333]
Length = 305
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/265 (39%), Positives = 145/265 (54%), Gaps = 19/265 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
+ VH+++Y+ + + R +Q G ++ T + ++ +L A A + VD V A
Sbjct: 59 LQQVHSQSYI----ETVARIAQSGGGSLDAD--TAVSPQSYDIALLAISAWLDGVDRVLA 112
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ N F L RPPGHHA MGFC+F N AIAA YA G+ RV I+D+DVHH
Sbjct: 113 NNNP-----AFVLSRPPGHHAERNTGMGFCLFSNAAIAAYYALDQQGINRVAILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT DP I + S HQ YPGTGK +E G+ + LNLPL GS + +
Sbjct: 168 GNGTQAIVETDPRIAYCSLHQSPCYPGTGKANEQGK---HHNVLNLPLSPGSNIEVYQPL 224
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F + I+P + F+PDL++VSAGYDA DPLA + Y + QL + R
Sbjct: 225 FEQKIIPFLKNFQPDLLIVSAGYDATAADPLAGMALQPEDYGLFTEYCLQLTR-----RI 279
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFL 290
+F LEGGY+LNSL+ SV + + L
Sbjct: 280 LFGLEGGYDLNSLAQSVLQTIKPCL 304
>gi|302342023|ref|YP_003806552.1| histone deacetylase superfamily protein [Desulfarculus baarsii DSM
2075]
gi|301638636|gb|ADK83958.1| histone deacetylase superfamily [Desulfarculus baarsii DSM 2075]
Length = 344
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 162/310 (52%), Gaps = 18/310 (5%)
Query: 16 KNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
K P +++D+ VH AYV + + A Q+ L + T A+ + + AAG
Sbjct: 46 KQARPITLEDLERVHTPAYVRII---LATARQR---LTHLAPDTIASRDSCLAAWLAAGG 99
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
+ VD + A + + L RPPGHHA+ GFC+F N+ +AAR+A R GL+R
Sbjct: 100 CVLGVDDLLAGRCQA----CLVLCRPPGHHALADRAGGFCIFNNLGLAARHALR-RGLRR 154
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
V I+D+D+HHGN + FY D + +LSTH +YP TGK+ EVG G G G T+NLPLP
Sbjct: 155 VLIVDWDIHHGNALQNLFYADDRVVYLSTHLPNAYPFTGKLGEVGVGPGAGHTINLPLPP 214
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
GD T++ V+ +RF P++I+V+ G+DAH DP+ + T +Y LA +
Sbjct: 215 KWGDNDAMTLYRVVLEQLVERFSPEMIMVACGFDAHFRDPIGATLQTEASYAGLAQLVAT 274
Query: 256 LAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQ 315
L + LEGGY+ ++L+ VA+ A + + ++ S K +
Sbjct: 275 LGPRNNDIPLLLALEGGYDPDTLTACVAEVLAALQDQRHGQA-------VWSAQSQKADE 327
Query: 316 AIERVKHIHS 325
+ R +H+
Sbjct: 328 LLARAGRVHA 337
>gi|134095790|ref|YP_001100865.1| histone deacetylase/AcuC/AphA family protein [Herminiimonas
arsenicoxydans]
gi|133739693|emb|CAL62744.1| Deacetylase [Herminiimonas arsenicoxydans]
Length = 310
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 153/287 (53%), Gaps = 14/287 (4%)
Query: 4 TSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA 63
T EF +E E + + + +H A+V +E D + QG + ++G G T +
Sbjct: 36 TPEFDAAEWREAPM---GTREQVLMIHTEAFVEDVE---DASPNQGYMPLDG-GDTVMSP 88
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
+ + + GA A VD+V + R F RP GHHA P MGFC++ AIA
Sbjct: 89 GSLEAVMRCVGAACAGVDAVMGKEVRN----VFCATRPCGHHAEPNKAMGFCIYNQAAIA 144
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
A YA H L+RV ++DFDVHHGNGT AFYD P++F+ S+HQ YPGTG E G
Sbjct: 145 AAYAYDVHKLERVAVVDFDVHHGNGTQAAFYDRPELFYASSHQSHFYPGTGLEAETGISH 204
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
+ +N+PLP G R ++P + F P+++++SAG+DAH LDPLA L
Sbjct: 205 ---NIVNVPLPRGCDSAMFREQIAAKMLPAIRAFNPEILIISAGFDAHHLDPLAGLNLQD 261
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ + + ++A D C R V LEGGY+L L+ S A +A +
Sbjct: 262 DDFDWVTRELMKIADDCCEGRVVSILEGGYSLEGLASSTAIHVKALM 308
>gi|296775670|gb|ADH42947.1| deacetylase protein [uncultured SAR11 cluster alpha proteobacterium
H17925_23J24]
Length = 306
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 142/262 (54%), Gaps = 13/262 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
H Y+ +EK+ + +G+ ++G T + + Q S A + I +DSV +
Sbjct: 56 THKSNYIDEVEKSFPK---KGLHFLDGD--TIVSPGSKQASSDAVASIITAIDSVQNKEF 110
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ F +RPPGHHA MGFC++ NVA+ A Y + L ++ IIDFDVHHGNG
Sbjct: 111 KN----VFCPVRPPGHHAEKDKAMGFCIYNNVAVGAHYIIEKYKLNKIAIIDFDVHHGNG 166
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
T D FYD+ + ++STHQ YPGTG +E G+ + LN+PLP G+ + E
Sbjct: 167 TQDIFYDNEKVLYISTHQYPFYPGTGANNEKGK---HNNVLNIPLPAGTNSEEYMNAY-E 222
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
++ + FKP +L SAG+DAH DPLA + + +Y + ++A + S+ V
Sbjct: 223 HVLKKLREFKPHFVLFSAGFDAHENDPLAQFRLKSKDFYDITKRTLEVANESSNSKVVSV 282
Query: 269 LEGGYNLNSLSYSVADSFRAFL 290
LEGGY+LN+L S +A L
Sbjct: 283 LEGGYDLNALKESSEMHLKALL 304
>gi|427781123|gb|JAA56013.1| Putative histone deacetylase domain protein [Rhipicephalus
pulchellus]
Length = 471
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 164/309 (53%), Gaps = 24/309 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT--TFQESLAAAGAGIA 78
A+ +++ VH + ++ L +A ++ S + + L T T Q + A G +
Sbjct: 54 ATDEELGLVHTKDHIE-LIRATEKMSLEEVTLENHRLDPVTTICQETNQCARLACGCLLQ 112
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD+V + K R G ALIRPPGHH+ GFC+F N A+AARYA + +GLKR+ I
Sbjct: 113 AVDAVVSGKCRN----GVALIRPPGHHSAADTVSGFCIFNNAAVAARYAMQRYGLKRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYPGTGKIDE--VGRGDGEGSTLNLPL 193
D+DVHHGNGT D FYD + ++S H ++ +P T D VGRGDG G +N+P
Sbjct: 169 FDWDVHHGNGTQDIFYDSNSVLYISLHRYSKEKIFPKTEISDAAYVGRGDGRGYNINIPW 228
Query: 194 PGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
+ D T +++++P A F P+L++VSAG+D+ D L T Y + +
Sbjct: 229 TKPAITDADYLTAMYQLVMPVASEFDPELVIVSAGFDSAKGDILGDCCVTPAGYQHMTSL 288
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA R + LEGGYN++ ++ S+A +G+P ++ +PSA
Sbjct: 289 LKNLAH----GRVIIQLEGGYNVDVVAESLAACMATLMGDPCD-------SVTNMQPSAS 337
Query: 313 VKQAIERVK 321
Q+I R K
Sbjct: 338 AMQSIARAK 346
>gi|427781125|gb|JAA56014.1| Putative histone deacetylase domain protein [Rhipicephalus
pulchellus]
Length = 471
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/309 (34%), Positives = 164/309 (53%), Gaps = 24/309 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT--TFQESLAAAGAGIA 78
A+ +++ VH + ++ L +A ++ S + + L T T Q + A G +
Sbjct: 54 ATDEELGLVHTKDHIE-LIRATEKMSLEEVTLENHRLDPVTTICQETNQCARLACGCLLQ 112
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD+V + K R G ALIRPPGHH+ GFC+F N A+AARYA + +GLKR+ I
Sbjct: 113 AVDAVVSGKCRN----GVALIRPPGHHSAADTVSGFCIFNNAAVAARYAMQRYGLKRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYPGTGKIDE--VGRGDGEGSTLNLPL 193
D+DVHHGNGT D FYD + ++S H ++ +P T D VGRGDG G +N+P
Sbjct: 169 FDWDVHHGNGTQDIFYDSNSVLYISLHRYSKEKIFPKTEISDATYVGRGDGRGYNINIPW 228
Query: 194 PGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
+ D T +++++P A F P+L++VSAG+D+ D L T Y + +
Sbjct: 229 TKPAITDADYLTAMYQLVMPVASEFDPELVIVSAGFDSAKGDILGDCCVTPAGYQHMTSL 288
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA R + LEGGYN++ ++ S+A +G+P ++ +PSA
Sbjct: 289 LKNLAH----GRVIIQLEGGYNVDVVAESLAACMATLMGDPCD-------SVTNMQPSAS 337
Query: 313 VKQAIERVK 321
Q+I R K
Sbjct: 338 AMQSIARAK 346
>gi|307545468|ref|YP_003897947.1| histone deacetylase superfamily protein [Halomonas elongata DSM
2581]
gi|307217492|emb|CBV42762.1| histone deacetylase superfamily [Halomonas elongata DSM 2581]
Length = 375
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 147/293 (50%), Gaps = 11/293 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E++ P ++D+ H AY+ LE A DR E G A SLAA
Sbjct: 64 LEVRKAGPVEIEDLRRFHTGAYLDRLE-AGDR---------ERGGDAGEGAPYLPGSLAA 113
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
A + L + + R +AL RPPGHHA GFC+ GN+ +A A+
Sbjct: 114 ARQSVGLAVAAVEAVARGRLSNAYALCRPPGHHAEADRGRGFCLLGNIPVAVMRARALGL 173
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNL 191
++RV I+D+DVHHGNG AFY DP++ +S HQDG+YP TG +E G+G G G+ LNL
Sbjct: 174 VRRVVILDWDVHHGNGQQAAFYADPEVLTVSVHQDGNYPLETGAFEEQGKGPGLGANLNL 233
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP G G A +++P + F PDL++V+ GYDA DPL + + + +
Sbjct: 234 PLPPGCGLGAYEYAMRSLVLPAIEAFAPDLVVVACGYDACAKDPLGKMMLNSRAFGEMTR 293
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
+ L + LC R V EGGY+ + + +A G + + N I
Sbjct: 294 ELVALTERLCDGRLVMVHEGGYSEGYVPFCGHAVIQALCGSTTSVPDPQNDEI 346
>gi|429335609|ref|ZP_19216230.1| histone deacetylase family protein [Pseudomonas putida CSV86]
gi|428759678|gb|EKX81971.1| histone deacetylase family protein [Pseudomonas putida CSV86]
Length = 370
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 146/264 (55%), Gaps = 13/264 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT-TFQESLA 71
++++ +PAS +D+ VH Y+ D + GP ++ +
Sbjct: 62 LQVRGAAPASEEDLLRVHTPDYLQRFRALSDAGGGE-------LGPHAPIGPGSYGIARL 114
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG +A VD+V A + ++L RPPGHH + G MGFC N+A+A A+
Sbjct: 115 SAGLAMAAVDAVLAGEVDN----AYSLSRPPGHHCLADGAMGFCFLANIAVAIEVAKARR 170
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
GL +V +ID+DVHHGNGT F + D+ +S HQDG +P G DE GRG G G+ +N
Sbjct: 171 GLGKVAVIDWDVHHGNGTQSIFEERGDVLSISLHQDGCFPAGYSGEDERGRGAGLGANIN 230
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP GSG A ++VP +RF+P+LI+V+ GYDA+ +DPLA + + ++ +
Sbjct: 231 IPLPPGSGHAAYIHAMERIVVPALERFEPELIIVACGYDANAVDPLARMLLHSDSFREMT 290
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
+++ A+ LC R V EGGY+
Sbjct: 291 RLVREAAERLCQGRLVLVHEGGYS 314
>gi|324503375|gb|ADY41470.1| Histone deacetylase 6 [Ascaris suum]
Length = 847
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 145/265 (54%), Gaps = 10/265 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D++ VH A++ +E + + + S Y +F+ S+AA G+ + V
Sbjct: 468 ATYDELRLVHQLAHIKHMEAIAEVDESERRREEDHSNSMYFCKESFRASIAAVGSILECV 527
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + + FALIRPPGHHA P GFC+F NVAIAA+YA +GL+R+ I+D
Sbjct: 528 DAVLDEERKERARNAFALIRPPGHHATPSQAAGFCIFNNVAIAAKYAMEKYGLERILIVD 587
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGT--GKIDEVGRGDGEGSTLNLPLPG 195
+DVHHGNG + FY DP + ++S H+ DG YP +++ G G G G ++N+P
Sbjct: 588 WDVHHGNGIQEIFYSDPHVLYISLHRHDDGLFYPANEPKDVEDGGEGAGLGYSINIPFSH 647
Query: 196 GS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D R F +V++P A + P L++VS+G+DA D L + + Y L +
Sbjct: 648 GRMSDNDYRMAFTKVVMPIAYEYSPQLVIVSSGFDAAYGDILGGYELSAQCYAQLTYQLG 707
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLS 279
LAK R + LEGGY+L L
Sbjct: 708 ALAK----GRIIVALEGGYSLTVLQ 728
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 136/279 (48%), Gaps = 15/279 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
P D+ H + YV + + +++ + L Y T++ AA +A
Sbjct: 58 PIDEGDLRETHDQNYVRCVAELRNKSKKALDELANKFDSVYLCQGTYE----AACEAVAC 113
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
++AA + P GFALIRPPGHHA GFCVF NVA AA A G R+ I+
Sbjct: 114 TRNMAALIAKRKIPNGFALIRPPGHHAQRNAANGFCVFNNVAQAAEEAYN-FGEDRILIV 172
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPLP 194
DFDVHHG G +FY++ + + S H +DG + D +G G G +N+PL
Sbjct: 173 DFDVHHGQGVQQSFYEEKRVMYCSIHRYEDGKFWPHLAESNFDHIGVSSGVGYNINIPLN 232
Query: 195 G-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
G GD +F VI P A ++P ++V+AGYDA DP+ ++ + + ++
Sbjct: 233 ELGCGDADYMAIFWNVIWPIASTYRPHFVVVAAGYDACQGDPIGAMDVSPDLFAHFVYHL 292
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
K LA G + + LE GYN +++ V R LGE
Sbjct: 293 KGLA----GGKILLCLEDGYNERNVALCVERCIRILLGE 327
>gi|344244936|gb|EGW01040.1| Histone deacetylase 10 [Cricetulus griseus]
Length = 571
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 160/282 (56%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ +++ A ++ + + Y +TF + A GA + LV
Sbjct: 64 ASEEELGLVHSPEYIALVQRTQTLAKEELQEMSKQFDAVYFHPSTFHCARLAVGAALQLV 123
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVAIAA++A++ +GL+R+ I
Sbjct: 124 DAVLTGAVHN------GLALVRPPGHHSQKAAANGFCVFNNVAIAAKHAKQKYGLQRILI 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKID--EVGRGDGEGSTLNLPL 193
+D+D+HHG G F DDP + + S H + G +P + D VG+G G+G T+NLP
Sbjct: 178 VDWDIHHGQGIQYIFDDDPSVLYFSWHRYEHGRFWPFLQESDACAVGQGQGQGFTVNLPW 237
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 238 NQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 293
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 294 LIQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 335
>gi|440899055|gb|ELR50426.1| Histone deacetylase 10, partial [Bos grunniens mutus]
Length = 667
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 152/280 (54%), Gaps = 14/280 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++ VH+ Y++ L +++ L + Y +TF + A GA + LV
Sbjct: 55 ASEAELGLVHSPEYIALLRGTQALGTRELQALSKEYDAVYLHPSTFHCARLAVGAALQLV 114
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V R G AL+RPPGHH+ GFC+F NVA+AA++AQ+ HGL+R+ I+D
Sbjct: 115 DAVLTGAVRN----GLALVRPPGHHSQRATANGFCLFNNVAVAAKHAQQKHGLRRILIVD 170
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYPGTGK---IDEVGRGDGEGSTLNLPLPG 195
+DVHHG G F DDP + + S H + G + + D VGRG G G T+NLP
Sbjct: 171 WDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHFWPCLRESDADAVGRGRGLGFTVNLPWNQ 230
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G G+ F V++P A F P+L+LVSAG+D+ + DP + T + A++
Sbjct: 231 VGMGNADYVAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMLATPECF----AHLT 286
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
L + L G LEGGY+L SLS SV RA LG+P+
Sbjct: 287 HLLQVLAGGWVCAVLEGGYHLESLSQSVCMMVRALLGDPA 326
>gi|357625415|gb|EHJ75870.1| putative histone deacetylase 7A [Danaus plexippus]
Length = 906
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/290 (37%), Positives = 157/290 (54%), Gaps = 27/290 (9%)
Query: 21 ASVDDIASVHARAYVS-----GLEKAMDRASQQGIILIEG-----SGPTYATATTFQESL 70
A+++++ SVH A+V+ G A D + + + L G + ++ A T +
Sbjct: 507 ATLEELQSVHGEAHVAAWAGRGRPGAGDGRAVRLVRLACGGLGVDADTAFSDAHTPPAAR 566
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAGA I L A ++ R GFA++RPPGHHA P MGFC F NVAIAAR
Sbjct: 567 LAAGALIDLATRTATNELR----NGFAIVRPPGHHAEPNQAMGFCFFNNVAIAARILHTR 622
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGS 187
GL+R+ I+D+DVHHGNGT FY+DP + ++S H+ DG+ +PGTG E G G G G
Sbjct: 623 LGLQRILIVDWDVHHGNGTQQIFYEDPHVLYISLHRHDDGNFFPGTGAASECGAGPGLGY 682
Query: 188 TLNLPLPGGS--GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
T+N+ PG D F V++P A+ + P+L+LVS G+DA P G
Sbjct: 683 TVNVAWPGSPPLADAEYLAAFRTVVMPIAKEYDPELVLVSCGFDAAAGHP-----APMGG 737
Query: 246 YYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
Y + AA + ++ L G + V LEGGY+L ++ + RA LGE
Sbjct: 738 YNVSAACFAHMTRELMSLAGGKVVLSLEGGYDLAAMCDCAQECVRALLGE 787
>gi|78485200|ref|YP_391125.1| histone deacetylase superfamily protein [Thiomicrospira crunogena
XCL-2]
gi|78363486|gb|ABB41451.1| Histone deacetylase family protein [Thiomicrospira crunogena XCL-2]
Length = 306
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 148/276 (53%), Gaps = 15/276 (5%)
Query: 16 KNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
K+ PA+ D+ VH+ + L+K + + G + I+ T + + + +LAA+GA
Sbjct: 45 KSILPATEIDVLRVHSSPFWETLKKHL---PENGFVKIDED--TSLSPGSLESALAASGA 99
Query: 76 GIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
+ +D++ + + F IRPPGHHA PMGFC+ ++AI A YA + L+R
Sbjct: 100 MLTAIDAIMHREAKQ----AFCNIRPPGHHAERNRPMGFCLINHIAIGAAYALEKYALER 155
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPG 195
+ I+DFDVHHGNGT D + + ++S+ Q+G +P T I ++ + LPLP
Sbjct: 156 IVIVDFDVHHGNGTEDYVRHEARVGYVSSFQEGIFPFTDPISDL------DNMRKLPLPA 209
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
S T + + ++F P LILVSAG+DAH DPLASL T +Y +
Sbjct: 210 QSDGKEFMTAWQQNGFEFIRKFNPQLILVSAGFDAHKNDPLASLNLTEQDFYHWTQQLMM 269
Query: 256 LAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
LA D+C R + LEGGY LN+L+ S +A G
Sbjct: 270 LANDICDGRVISILEGGYELNALADSAVAHVKALQG 305
>gi|152994674|ref|YP_001339509.1| histone deacetylase superfamily protein [Marinomonas sp. MWYL1]
gi|150835598|gb|ABR69574.1| histone deacetylase superfamily [Marinomonas sp. MWYL1]
Length = 307
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 140/259 (54%), Gaps = 15/259 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ + + H AYV + RA ++G + +E T T +L AAG+ I
Sbjct: 50 PATREQLLLAHDEAYVDSI---FARAPEEGHVELEPE--TLMMPHTLDAALYAAGSVIKA 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD V S+ F IRPPGHHA MGFC+F N+A+ RYA +GL+RV I+
Sbjct: 105 VDLVMTSEMDN----AFCAIRPPGHHAEYDKAMGFCLFNNIAVGTRYAIEKYGLERVAIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
DFDVHHGNGT D F DP + + S++Q YP + G + L++PL GSG
Sbjct: 161 DFDVHHGNGTEDIFKADPKVLYASSYQHPFYPYSDP------GASHDNILHMPLEAGSGS 214
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
A +T+ E ++P FKP LI++SAG+DAH DP+ L+ + + + + +A
Sbjct: 215 EAFQTIMTEQLLPALDTFKPQLIMISAGFDAHKEDPMGQLRLSESDFTWITDLLMDVADR 274
Query: 260 LCGSRCVFFLEGGYNLNSL 278
C V LEGGYN+++L
Sbjct: 275 HCSGNVVSVLEGGYNVDAL 293
>gi|82884146|gb|ABB92849.1| histone deacetylase 4 [Danio rerio]
Length = 1023
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 177/328 (53%), Gaps = 37/328 (11%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
A+++++ +VH+ A+V + L + +D + + + G + T + E +++ A
Sbjct: 651 ATLEELQTVHSEAHVLLYGTNPLRQKLDSSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAA 710
Query: 76 GIA------LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A LV VA+ + R GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 711 RLAVGSVVDLVFKVASGELRN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 766
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP++ +LS H+ DG+ +PG+G DEVG G G G
Sbjct: 767 RLNVSKILIVDWDVHHGNGTQQAFYSDPNVLYLSLHRYDDGNFFPGSGAPDEVGIGPGVG 826
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 827 FNVNMAFTGGLEPPMGDADYLAAFTSVVMPIANEFSPDVVLVSSGFDAVEGHP-PPLGGY 885
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ T + L + LA G R V LEGG++L ++ + A LG +E
Sbjct: 886 KLTAKCFGYLTKQLMGLA----GGRLVLALEGGHDLTAICDASEACVSALLG-----NEL 936
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D IL + P+A Q++E+V + S
Sbjct: 937 DPIPEDILQQRPNANAIQSMEKVLEVQS 964
>gi|381172189|ref|ZP_09881322.1| histone deacetylase domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687345|emb|CCG37809.1| histone deacetylase domain protein [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 275
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/186 (46%), Positives = 115/186 (61%), Gaps = 4/186 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ I+DFDVHHGNGT F
Sbjct: 85 FCAVRPPGHHATAQVSMGFCLFNNIAVAAAHARDRHGLERITIVDFDVHHGNGTQAIFER 144
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 145 DPAVQYLSTHQSGLYPHSGSVYE----RGVGNIHNLLLPPGSDGLRFRNVWEDEMLPLVD 200
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P LIL+SAG+DAH+ DPLA L G + L ++ LA R V LEGGY+L
Sbjct: 201 AFRPQLILISAGFDAHLRDPLADLMLDDGDFGWLTGALRTLADRHARGRVVSMLEGGYDL 260
Query: 276 NSLSYS 281
+L S
Sbjct: 261 QALRES 266
>gi|347963990|ref|XP_003437019.1| AGAP000532-PB [Anopheles gambiae str. PEST]
gi|333466941|gb|EGK96427.1| AGAP000532-PB [Anopheles gambiae str. PEST]
Length = 1118
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 137/228 (60%), Gaps = 14/228 (6%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G+ + +V+ V + R G ++RPPGHHA P GFC++ ++A+AAR+A + +
Sbjct: 636 ATGSVLTVVEDVLEGRTRS----GVCVVRPPGHHAEADTPHGFCIYNSIAVAARHAVKRY 691
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDE--VGRGDGEG 186
GL+RV I+D+DVHHGNGT F DP + ++S H+ +G+ +P + D VG G G G
Sbjct: 692 GLRRVLIVDWDVHHGNGTQHIFEQDPHVLYVSVHRYDNGAFFPRSTDADYTVVGSGPGRG 751
Query: 187 STLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
+N+P G GD FH VI+P A ++P+L+LVSAG+DA + DPL + T
Sbjct: 752 FNVNIPWNRKGMGDPEYVAAFHSVILPIAYEYEPELVLVSAGFDAAIGDPLGGCRVTPEA 811
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
Y + Q L G R V LEGGYN+NS+S+++A +A LG+P
Sbjct: 812 Y----GHFTQWLSVLAGGRLVLCLEGGYNVNSISHAMAMCAKALLGDP 855
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 135/237 (56%), Gaps = 15/237 (6%)
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
T+++ S+ A G+ I LV+SV + + G A++RPPGHHA+ G+C F NVAIA
Sbjct: 201 TSYETSVLAVGSTIQLVESVWSGTVQN----GMAILRPPGHHAMTAEYNGYCFFNNVAIA 256
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK--IDE 178
A++A G +++ I+D+DVHHG GT FY DP + + S H + G+ +P + D
Sbjct: 257 AQHALDHLGTQKILIVDWDVHHGQGTQRMFYSDPRVLYFSIHRYEHGTFWPNLRESDFDY 316
Query: 179 VGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
VG G GEG N+PL G + ++ ++++P A F P+LI+VSAGYD+ + D
Sbjct: 317 VGTGKGEGYNFNVPLNKTGMTNGDYLAIWQQLLLPVATEFAPELIIVSAGYDSALGDEKG 376
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
++ T Y L + + +A+ R LEGGY L SL+ A + + LG+P+
Sbjct: 377 CME-TPAFYSHLLSPLLLMAQ----GRVAVVLEGGYCLESLAEGCALTLKTLLGDPA 428
>gi|347963988|ref|XP_310554.5| AGAP000532-PA [Anopheles gambiae str. PEST]
gi|333466940|gb|EAA06256.6| AGAP000532-PA [Anopheles gambiae str. PEST]
Length = 1118
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 137/228 (60%), Gaps = 14/228 (6%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G+ + +V+ V + R G ++RPPGHHA P GFC++ ++A+AAR+A + +
Sbjct: 636 ATGSVLTVVEDVLEGRTRS----GVCVVRPPGHHAEADTPHGFCIYNSIAVAARHAVKRY 691
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDE--VGRGDGEG 186
GL+RV I+D+DVHHGNGT F DP + ++S H+ +G+ +P + D VG G G G
Sbjct: 692 GLRRVLIVDWDVHHGNGTQHIFEQDPHVLYVSVHRYDNGAFFPRSTDADYTVVGSGPGRG 751
Query: 187 STLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
+N+P G GD FH VI+P A ++P+L+LVSAG+DA + DPL + T
Sbjct: 752 FNVNIPWNRKGMGDPEYVAAFHSVILPIAYEYEPELVLVSAGFDAAIGDPLGGCRVTPEA 811
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
Y + Q L G R V LEGGYN+NS+S+++A +A LG+P
Sbjct: 812 Y----GHFTQWLSVLAGGRLVLCLEGGYNVNSISHAMAMCAKALLGDP 855
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 88/237 (37%), Positives = 135/237 (56%), Gaps = 15/237 (6%)
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIA 123
T+++ S+ A G+ I LV+SV + + G A++RPPGHHA+ G+C F NVAIA
Sbjct: 201 TSYETSVLAVGSTIQLVESVWSGTVQN----GMAILRPPGHHAMTAEYNGYCFFNNVAIA 256
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK--IDE 178
A++A G +++ I+D+DVHHG GT FY DP + + S H + G+ +P + D
Sbjct: 257 AQHALDHLGTQKILIVDWDVHHGQGTQRMFYSDPRVLYFSIHRYEHGTFWPNLRESDFDY 316
Query: 179 VGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
VG G GEG N+PL G + ++ ++++P A F+P+LI+VSAGYDA P
Sbjct: 317 VGTGKGEGYNFNVPLNKTGMTNGDYLAIWQQLLLPVATEFQPELIIVSAGYDAAYGCPEG 376
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
++ T Y L + + +A+ R LEGGY L SL+ A + + LG+P+
Sbjct: 377 CME-TPAFYSHLLSPLLLMAQ----GRVAVVLEGGYCLESLAEGCALTLKTLLGDPA 428
>gi|218440466|ref|YP_002378795.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7424]
gi|218173194|gb|ACK71927.1| histone deacetylase superfamily [Cyanothece sp. PCC 7424]
Length = 306
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 149/265 (56%), Gaps = 19/265 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
++ H R Y+ L+ ++QG +++ P + ++ +L A A + +D V
Sbjct: 59 VSKFHHREYIHYLKNL----AEQGGGMLDPDTPV--SPQSYDIALLAVSAWLDGIDHVL- 111
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+N P FAL+RPPGHHA K MGFC+F N AIAA YA G+ RV I+D+DVHH
Sbjct: 112 ERNNP----AFALVRPPGHHATKKMGMGFCLFSNAAIAAHYALEKPGINRVAILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D +P I + S HQ YPGTG+ + RG E + LN+PLP GS + +
Sbjct: 168 GNGTEDIVQGNPHIVYCSVHQFPCYPGTGRASD--RGHYE-NVLNIPLPPGSTLKEYQVM 224
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F I+P ++F+PDL+LVSAGYDA+ DPLA + Y + + + + + R
Sbjct: 225 FEGKIIPFLKKFQPDLLLVSAGYDANHDDPLAMMSLQPSDYGIFSRYLLGVTR-----RI 279
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFL 290
+F LEGGYNL +S SV + F+
Sbjct: 280 LFGLEGGYNLEVMSQSVVATVEPFM 304
>gi|320583009|gb|EFW97225.1| Putative catalytic subunit of a class II histone deacetylase
complex [Ogataea parapolymorpha DL-1]
Length = 716
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 150/281 (53%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS ++I VH ++ +E ++ + E Y + + + G I
Sbjct: 112 ASAEEILLVHTPEHLRFIESTQQMTKEELMAHTEKGDSVYFNNDSLLSAKLSCGGAIEAC 171
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR--YAQRAHGLKRVFI 138
+V + + A++RPPGHHA P P GFC+F NVA+AA+ A ++R+ I
Sbjct: 172 KAVVEGRVKN----ALAVVRPPGHHAEPDAPGGFCLFSNVAVAAKSILASYPESVRRIVI 227
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNGT AF+DDP + ++S H+ YPGT G D+VG G GEG +N+P
Sbjct: 228 VDWDVHHGNGTQKAFFDDPRVLYISLHRYEHGKYYPGTKAGGADQVGSGAGEGFNVNIPW 287
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F+ VI+P F PDL+++S+G+DA D + + Y +
Sbjct: 288 PVGGVGDADYIYAFNRVIMPVCHEFAPDLVIISSGFDAADGDIIGGCHVSPAGYGHMTHA 347
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+K LAK G+ CV LEGGYNL++++ S + LGEP
Sbjct: 348 LKSLAK---GNLCV-VLEGGYNLDAIASSALRVAKVLLGEP 384
>gi|326402851|ref|YP_004282932.1| hypothetical protein ACMV_07030 [Acidiphilium multivorum AIU301]
gi|325049712|dbj|BAJ80050.1| hypothetical protein ACMV_07030 [Acidiphilium multivorum AIU301]
Length = 309
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 153/277 (55%), Gaps = 13/277 (4%)
Query: 15 LKNFSPASVDD-IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
L+ +P + + + +VH AYV + AM A + + L T + + +L +A
Sbjct: 43 LREVAPEAPESALRAVHHDAYVDSI-LAMAPAEGEPVHL---DADTLMSHGSLAAALRSA 98
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G + VD+V R F RPPGHHA P MGFC+F N AIAA +A+ GL
Sbjct: 99 GGAMRAVDAVMEGWAR----AAFVATRPPGHHAEPNRAMGFCLFANAAIAAHHARAH-GL 153
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
KRV ++DFDVHHGNGT F D D+F+ S+HQ YPGTG+ E G G+ +N L
Sbjct: 154 KRVAVVDFDVHHGNGTQAMFETDADLFYASSHQYPCYPGTGRPSERGVA---GNIVNAAL 210
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
P GSG R + + ++P +RF P+L+++SAG+DAH DPLA L T + L +
Sbjct: 211 PPGSGSAEFRAAWQDTLIPALERFAPELLIISAGFDAHRFDPLAELNVETADFAWLTEAL 270
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
++A CG + V LEGGY+L +L+ A RA +
Sbjct: 271 VRVADRHCGGKVVSLLEGGYDLEALAAGTAAHVRALM 307
>gi|393220433|gb|EJD05919.1| histone deacetylase clr3 [Fomitiporia mediterranea MF3/22]
Length = 733
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 133/236 (56%), Gaps = 15/236 (6%)
Query: 63 ATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
+TT L+ G V A + R + FA++RPPGHHA P+ MGFC F NVA+
Sbjct: 212 STTMAAQLSCGG-----VIEAALAVARGELEKSFAIVRPPGHHAEPEEHMGFCFFNNVAV 266
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--GKID 177
AAR Q+ LKR+ I+D+DVH GNGT AF DDP + ++S H+ + YPG G +D
Sbjct: 267 AARVVQQLTPLKRILILDWDVHQGNGTQRAFNDDPSVLYISIHRYENGIFYPGGPFGGLD 326
Query: 178 EVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
G G GEG+++N+P P G GD F +++P A +F P+L+++SAG+DA D L
Sbjct: 327 SCGEGAGEGTSVNIPWPEAGMGDAEYIHAFTRIVIPIAMQFAPELVIISAGFDAADGDDL 386
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
T Y M+ + LA G + V LEGGYN+ S+S S R LG+
Sbjct: 387 GECHVTPAGYAMMTHMLSSLA----GGKLVVALEGGYNVESISNSALAVTRVLLGD 438
>gi|296387713|ref|ZP_06877188.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAb1]
gi|416875257|ref|ZP_11918601.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa 152504]
gi|334842226|gb|EGM20838.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa 152504]
Length = 380
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 163/301 (54%), Gaps = 27/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG G +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYGGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN--------------LNSLSYSVADSFRAF--LGEPSK 295
++ A+ G R V EGGY+ L+ + +V D R F L +P+
Sbjct: 292 MVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA 351
Query: 296 A 296
A
Sbjct: 352 A 352
>gi|297621481|ref|YP_003709618.1| histone deacetylase [Waddlia chondrophila WSU 86-1044]
gi|297376782|gb|ADI38612.1| histone deacetylase family protein [Waddlia chondrophila WSU
86-1044]
Length = 318
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/255 (40%), Positives = 138/255 (54%), Gaps = 10/255 (3%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGI---ILIEGSGPTYATATTFQESLAAAGAGIALVD 81
D+ H + Y+ L K + + Q + +G T + + ++ AAGA IA VD
Sbjct: 52 DLLRCHTKGYIQTLIKDVAKCMQSRVHDGRYQLSTGDTQISPLSLLAAVKAAGAVIAGVD 111
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V R D F L+RPPGHHA MGFC+F N A+ ARYAQ +++V IID+
Sbjct: 112 AVI----REDVKRVFCLVRPPGHHAESDQGMGFCLFNNAAVGARYAQTYKEIEKVAIIDW 167
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG--SGD 199
DVHHGNGT FYDDP + + STHQ YPGTG +E G G G G+TLN P+ G S +
Sbjct: 168 DVHHGNGTQAIFYDDPTVHYSSTHQFPHYPGTGSREETGIGRGIGTTLNCPINAGKRSRE 227
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F I P +FKPDLI++SAG+D DPL T L + ++A
Sbjct: 228 EVLRA-FRTEIRPALDKFKPDLIIISAGFDLLEEDPLGGFNATVEDIVELTHIVNKIADV 286
Query: 260 LCGSRCVFFLEGGYN 274
R + LEGGY+
Sbjct: 287 HAEGRIISVLEGGYD 301
>gi|83753890|pdb|1ZZ0|A Chain A, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753891|pdb|1ZZ0|B Chain B, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753892|pdb|1ZZ0|C Chain C, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753893|pdb|1ZZ0|D Chain D, Crystal Structure Of A Hdac-Like Protein With Acetate
Bound
gi|83753894|pdb|1ZZ1|A Chain A, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753895|pdb|1ZZ1|B Chain B, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753896|pdb|1ZZ1|C Chain C, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753897|pdb|1ZZ1|D Chain D, Crystal Structure Of A Hdac-Like Protein With Saha Bound
gi|83753898|pdb|1ZZ3|A Chain A, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753899|pdb|1ZZ3|B Chain B, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753900|pdb|1ZZ3|C Chain C, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|83753901|pdb|1ZZ3|D Chain D, Crystal Structure Of A Hdac-Like Protein With Cypx Bound
gi|145579387|pdb|2GH6|A Chain A, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579388|pdb|2GH6|B Chain B, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579389|pdb|2GH6|C Chain C, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
gi|145579390|pdb|2GH6|D Chain D, Crystal Structure Of A Hdac-Like Protein With
9,9,9-Trifluoro-8-Oxo-N- Phenylnonan Amide Bound
Length = 369
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
DI H+ A++ + M R S G G T + + +AG + L VA
Sbjct: 71 DILRAHSAAHL----ENMKRVSNLPTGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVA 126
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ G+AL+ PPGHHA MGFC+F N ++AA YA+ G++RV I+D+DVH
Sbjct: 127 TGELSA----GYALVNPPGHHAPHNAAMGFCIFNNTSVAAGYARAVLGMERVAILDWDVH 182
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HGNGT D +++DP + +S HQ + P +G E G G+G G +N+PLP GSG+ A
Sbjct: 183 HGNGTQDIWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVPLPPGSGNAAYL 242
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+V++P + ++P LI+V +G+DA +LDPLA + T + +A A D+C
Sbjct: 243 HAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDG 302
Query: 264 RCVFFLEGGYNLNSLSY---SVADSFRAFLGEPSKASEF 299
R VF EGGY+ + L + +V + P EF
Sbjct: 303 RIVFVQEGGYSPHYLPFCGLAVIEELTGVRSLPDPYHEF 341
>gi|164519535|pdb|2VCG|A Chain A, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519536|pdb|2VCG|B Chain B, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519537|pdb|2VCG|C Chain C, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
gi|164519538|pdb|2VCG|D Chain D, Crystal Structure Of A Hdac-like Protein Hdah From
Bordetella Sp. With The Bound Inhibitor St-17
Length = 375
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 148/279 (53%), Gaps = 12/279 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
DI H+ A++ + M R S G G T + + +AG + L VA
Sbjct: 77 DILRAHSAAHL----ENMKRVSNLPTGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVA 132
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ G+AL+ PPGHHA MGFC+F N ++AA YA+ G++RV I+D+DVH
Sbjct: 133 TGELSA----GYALVNPPGHHAPHNAAMGFCIFNNTSVAAGYARAVLGMERVAILDWDVH 188
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HGNGT D +++DP + +S HQ + P +G E G G+G G +N+PLP GSG+ A
Sbjct: 189 HGNGTQDIWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVPLPPGSGNAAYL 248
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+V++P + ++P LI+V +G+DA +LDPLA + T + +A A D+C
Sbjct: 249 HAMDQVVLPALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDG 308
Query: 264 RCVFFLEGGYNLNSLSY---SVADSFRAFLGEPSKASEF 299
R VF EGGY+ + L + +V + P EF
Sbjct: 309 RIVFVQEGGYSPHYLPFCGLAVIEELTGVRSLPDPYHEF 347
>gi|375109330|ref|ZP_09755579.1| histone deacetylase/AcuC/AphA family protein [Alishewanella
jeotgali KCTC 22429]
gi|374570634|gb|EHR41768.1| histone deacetylase/AcuC/AphA family protein [Alishewanella
jeotgali KCTC 22429]
Length = 305
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/279 (36%), Positives = 140/279 (50%), Gaps = 15/279 (5%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
++ ++ SPA+ + + H + YV L +A +G I ++ T + +L
Sbjct: 42 VVMQRDASPATKEALYLAHGKRYVDEL---FAKAPTEGHIWLDPD--TIMGPKSLNAALH 96
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG+GI VD V N F +RPPGHHA + MGFC+ N+AIAA +A +
Sbjct: 97 AAGSGINAVDQVMKGSNEQ----AFCAVRPPGHHATREQAMGFCLLNNIAIAAEHALNTY 152
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
L R+ I+DFDVHHGNGT D F +P + F S+ + YP TG +NL
Sbjct: 153 QLSRIAIVDFDVHHGNGTEDIFQHEPRVLFCSSFEHPLYPYTGA------DSSNEHIINL 206
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL GG A R + +P F P LIL+SAG+D H D +A Y +A+
Sbjct: 207 PLAGGCRSGAWREQVQQHWLPAIDAFAPQLILISAGFDGHAEDEMAHFMLREEDYQWIAS 266
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+KQLA C R V LEGGY L++L SV + L
Sbjct: 267 ELKQLADKHCQGRIVAMLEGGYALSALGRSVVAFLKGLL 305
>gi|410901749|ref|XP_003964358.1| PREDICTED: histone deacetylase 5-like [Takifugu rubripes]
Length = 1142
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 174/332 (52%), Gaps = 39/332 (11%)
Query: 21 ASVDDIASVHARAYV-----SGL-------EKAMDRASQQGIILIEGSGPTYATATTFQE 68
AS+D+I SVH+ + S L +K + SQ+ ++ G + T + E
Sbjct: 753 ASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNE 812
Query: 69 SLA------AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
+ A G+ I L VAA + + GFA++RPPGHHA MGFC F +VAI
Sbjct: 813 MHSSSAVRMAVGSVIELAFRVAAGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAI 868
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEV 179
A+ Q+ G+ ++ I+D+D+HHGNGT AFY DP++ ++S H+ DG+ +PG+G +EV
Sbjct: 869 TAKLLQQKMGVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPEEV 928
Query: 180 GRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
G G G G +N+ GG GD F V++P AQ F PD++LVSAG+DA
Sbjct: 929 GSGGGNGFNVNIAWTGGVEPPMGDVEYLNAFRYVVMPIAQHFSPDVVLVSAGFDA----- 983
Query: 236 LASLQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ Q G Y + A + QL L G R V LEGG++L ++ + A LG+
Sbjct: 984 VEGHQSPLGGYNVSAKCFGQLTQLLMGLAGGRIVMALEGGHDLTAICDASESCVSALLGD 1043
Query: 293 PSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
+ E +++E+P K ++ERV I
Sbjct: 1044 LVRRLECQR--VIHEKPCPKAWASLERVIEIQ 1073
>gi|152986124|ref|YP_001346726.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PA7]
gi|150961282|gb|ABR83307.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PA7]
Length = 380
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 149/263 (56%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + +AL RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEADN----AYALSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ L A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRALTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
++ A+ G R V EGGY+
Sbjct: 292 MVRDAAERHAGGRLVVVHEGGYS 314
>gi|6324307|ref|NP_014377.1| Hda1p [Saccharomyces cerevisiae S288c]
gi|1730711|sp|P53973.1|HDA1_YEAST RecName: Full=Histone deacetylase HDA1
gi|1301851|emb|CAA95883.1| HDA1 [Saccharomyces cerevisiae]
gi|151944501|gb|EDN62779.1| histone deacetylase [Saccharomyces cerevisiae YJM789]
gi|285814630|tpg|DAA10524.1| TPA: Hda1p [Saccharomyces cerevisiae S288c]
gi|349580905|dbj|GAA26064.1| K7_Hda1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296968|gb|EIW08069.1| Hda1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 706
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEMIDKVIRLQS 425
>gi|170749160|ref|YP_001755420.1| histone deacetylase superfamily protein [Methylobacterium
radiotolerans JCM 2831]
gi|170655682|gb|ACB24737.1| histone deacetylase superfamily [Methylobacterium radiotolerans JCM
2831]
Length = 309
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/270 (38%), Positives = 151/270 (55%), Gaps = 12/270 (4%)
Query: 22 SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVD 81
++ + H RAYV L A+ + G++ I+ T +A + + +L A G G+ VD
Sbjct: 51 EIEAVTLAHPRAYVDALVAAV---PEHGMVGIDSD--TILSAGSLEATLRAVGGGMHAVD 105
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V + R F +RPPGHHA MGFC+F + AIAAR+A++ HG +RV ++D+
Sbjct: 106 AVVGGECRN----AFVAMRPPGHHAERTRAMGFCLFNHAAIAARHARQKHGAERVALVDW 161
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTA 201
DVHHGNG+ D F++D + + STHQ YPGTG E G D + +N+PL
Sbjct: 162 DVHHGNGSQDIFWNDASVLYCSTHQMPLYPGTGSPSERGEKD---TIVNVPLRPNDDGEV 218
Query: 202 MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC 261
R F I+ + F+PD+I++SAG+DAH LDPLA+L+ + + LA+
Sbjct: 219 FREAFETGILSRLEAFRPDVIVISAGFDAHKLDPLANLRLEAEDFGWATRRLMDLAERCA 278
Query: 262 GSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
G R V LEGGY+L L SVA A +G
Sbjct: 279 GGRIVSILEGGYSLEGLGKSVAAHVDALMG 308
>gi|348541327|ref|XP_003458138.1| PREDICTED: histone deacetylase 4-like [Oreochromis niloticus]
Length = 1111
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 175/328 (53%), Gaps = 37/328 (11%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQE------S 69
A+++++ +VH+ A+V + L + +D + + + G + T + E +
Sbjct: 738 ATLEELQTVHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGVGVDSDTIWNEVHSSSAA 797
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G+ + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 798 RLAVGSVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 853
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFYDDP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 854 RLNVNKILIVDWDVHHGNGTQQAFYDDPNVLYISVHRYDDGNFFPGSGAPDEVGSGPGVG 913
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 914 FNVNVAFTGGLDPPMGDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHP-PPLGGY 972
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
T+ + L + LA G R V LEGG++L ++ + A L + E
Sbjct: 973 TLTSKCFGYLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVAALLSQ-----EL 1023
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D A+L + P+ +++E+V HS
Sbjct: 1024 DPLPKAVLEQRPNPNAVRSLEKVLETHS 1051
>gi|408382627|ref|ZP_11180170.1| histone deacetylase superfamily protein [Methanobacterium
formicicum DSM 3637]
gi|407814703|gb|EKF85327.1| histone deacetylase superfamily protein [Methanobacterium
formicicum DSM 3637]
Length = 342
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 149/264 (56%), Gaps = 18/264 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PAS +D+ VH + Y++ L+K S G + + T+A+ ++Q + AAG I
Sbjct: 48 PASDEDLLRVHTKHYLNHLQKFT--KSGGGYLDFD----TFASPESYQIAKLAAGGAITA 101
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
V + +++ RPPGHHA +GFC+ N+A+A Y ++ HGL++ I+
Sbjct: 102 SQLVFDQSD-----FAYSMARPPGHHATADSALGFCLINNLAVALEYMRKTHGLRKFVIV 156
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGS 197
DFD H+GNGT + FY+DP + ++S HQD +PG G I+E G GEG LN+PLP GS
Sbjct: 157 DFDAHYGNGTAEIFYNDPQVLYISIHQDPRTIFPGKGFIEETGSRMGEGFNLNIPLPPGS 216
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G + + +++ P ++F+ D + G+D H DPL+SLQ Y + ++++++
Sbjct: 217 GTSDYIYILEKILEPACRKFQADFYFLDVGFDGHQDDPLSSLQLDDDFYPWITSHMQEIT 276
Query: 258 KDLCGSRCVFFLEGGYNLNSLSYS 281
+ V LEGGY+ ++++ S
Sbjct: 277 -----PKMVLILEGGYSQDAMARS 295
>gi|213408403|ref|XP_002174972.1| histone deacetylase clr3 [Schizosaccharomyces japonicus yFS275]
gi|212003019|gb|EEB08679.1| histone deacetylase clr3 [Schizosaccharomyces japonicus yFS275]
Length = 678
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 172/314 (54%), Gaps = 30/314 (9%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPT-YATATTFQESLAAAGAGIAL 79
A++++I VH++ V + K+ + S++ ++ +E + + Y TF + A+G+ +
Sbjct: 112 ATLEEILRVHSKD-VYDMVKSSETMSREELVNLEKTNDSLYFNNQTFFCARLASGSAVET 170
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR--YAQRAHGLKRVF 137
++V K + FA+IRPPGHH+ P GFC+F NVAI AR A+ +KRV
Sbjct: 171 CNAVVNGKVKN----AFAIIRPPGHHSEPNKSGGFCLFNNVAITARSMMARYPEQVKRVL 226
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLP 192
I+D+DVHHGNGT AFYDDP++ ++S H ++G YPGT G + G G+G G T+N+P
Sbjct: 227 ILDWDVHHGNGTQMAFYDDPNVLYISLHRYENGRFYPGTTYGSAENCGEGEGLGKTVNIP 286
Query: 193 LP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P G D F +V++P F PDL+++SAG+DA DPL T Y A
Sbjct: 287 WPCAGMSDGDYIYAFQKVVMPIGYEFNPDLVIISAGFDAAAGDPLGQCYLTPAAY----A 342
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILY----E 307
++ Q+ L + +EGGY+L+S+S + + LG P PA L+
Sbjct: 343 HMTQMLLGLAEGKLFVSMEGGYSLSSISTAGLAVAQTLLGIP--------PAKLHTVYAT 394
Query: 308 EPSAKVKQAIERVK 321
P+ K + + R++
Sbjct: 395 APAVKTVEEVTRIQ 408
>gi|83944322|ref|ZP_00956777.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. EE-36]
gi|83844866|gb|EAP82748.1| deacetylase / probable acetylpolyamine aminohydrolase
[Sulfitobacter sp. EE-36]
Length = 368
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 154/263 (58%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+++++ +PAS +D+ VH AY+ ++ D E T A F+ + +
Sbjct: 60 LDVRSAAPASREDLLRVHPAAYLDDFKRLSDAGGG------ELGLRTPFAAGGFEIAALS 113
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG +A V++VA + D +AL RPPGHHA+P P GFC+ N+AIA A+
Sbjct: 114 AGLSLAAVEAVA----KGDLDNAYALSRPPGHHALPDFPNGFCLLANIAIAIEAAKAKGL 169
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT FYD D+ +S HQ+G+YP TG + + G G G G +NL
Sbjct: 170 VRRVAVLDWDVHHGNGTEAIFYDRDDVLTISLHQEGNYPLDTGALADRGNGAGAGYNINL 229
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P+ GSG TA V++P ++PD+I+V+ G+DA ++DPLA +Q T T+ +
Sbjct: 230 PMHAGSGHTAYLHALDRVVLPALDTYQPDMIIVACGFDASIVDPLARMQATAETFAEMTQ 289
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
IK +A+ LCG + V EGGY+
Sbjct: 290 RIKAVAQKLCGGKLVLVHEGGYS 312
>gi|365763369|gb|EHN04898.1| Hda1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 706
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEIIDKVIRLQS 425
>gi|323352514|gb|EGA85014.1| Hda1p [Saccharomyces cerevisiae VL3]
Length = 706
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEIIDKVIRLQS 425
>gi|254236679|ref|ZP_04930002.1| hypothetical protein PACG_02687 [Pseudomonas aeruginosa C3719]
gi|126168610|gb|EAZ54121.1| hypothetical protein PACG_02687 [Pseudomonas aeruginosa C3719]
Length = 380
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/301 (33%), Positives = 163/301 (54%), Gaps = 27/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEVDN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG G +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYGGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN--------------LNSLSYSVADSFRAF--LGEPSK 295
++ A+ G R V EGGY+ L+ + +V D R F L +P+
Sbjct: 292 MVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA 351
Query: 296 A 296
A
Sbjct: 352 A 352
>gi|323335783|gb|EGA77063.1| Hda1p [Saccharomyces cerevisiae Vin13]
Length = 706
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEIIDKVIRLQS 425
>gi|289583553|ref|YP_003481963.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|448281641|ref|ZP_21472941.1| histone deacetylase [Natrialba magadii ATCC 43099]
gi|289533051|gb|ADD07401.1| Histone deacetylase [Natrialba magadii ATCC 43099]
gi|445578006|gb|ELY32425.1| histone deacetylase [Natrialba magadii ATCC 43099]
Length = 372
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 127/236 (53%), Gaps = 9/236 (3%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+A++RP GHHA P+ GFC F NVA+AA + +RV I+D+DVHHGNGT + F D
Sbjct: 133 YAMVRPSGHHAQPEQVDGFCYFNNVAVAADHILETTDTERVAIVDWDVHHGNGTQECFED 192
Query: 156 DPDIFFLSTHQD------GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEV 209
D+ + H D ++P TG +DEVG GDGEG +N+PLP G+GD VF +
Sbjct: 193 RDDVLVIGIHNDHWSWDPEAHPQTGDLDEVGTGDGEGYNVNVPLPPGTGDEGYEHVFDRI 252
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
+ P + + PDL+L+SAG DA +DPL T G + L + LA + G
Sbjct: 253 VEPLLRSYDPDLLLISAGQDAGTMDPLGRNVVTKGGFEELGRRARVLADEYAGGNLAVVQ 312
Query: 270 EGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
EGGY ++ L+Y+ LG + D+P +E ++ IE + HS
Sbjct: 313 EGGYQVSHLAYATLGVLEGVLGVETG---IDDPMAWMDEDYDSARRTIEDIATYHS 365
>gi|254487719|ref|ZP_05100924.1| histone deacetylase family protein [Roseobacter sp. GAI101]
gi|214044588|gb|EEB85226.1| histone deacetylase family protein [Roseobacter sp. GAI101]
Length = 368
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 153/263 (58%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+++++ A+ DD+ VH AY+ ++ D E T A F+ + +
Sbjct: 60 LDVRSAPQATHDDLLRVHPAAYLDEFKRLSDTGGG------ELGLRTPFAAGGFEIAALS 113
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA V++VA+ D +AL RPPGHHA+P P GFC+ N+AIA A+
Sbjct: 114 AGLSIAAVEAVASG----DIENAYALSRPPGHHALPDFPNGFCLLANIAIAIEAAKAKGL 169
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNL 191
+ RV ++D+DVHHGNGT FYD D+ +S HQ+G+YP TG + + G+G GEG +NL
Sbjct: 170 VNRVAVLDWDVHHGNGTEAIFYDRDDVLTISLHQEGNYPLDTGALTDRGKGAGEGYNINL 229
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL GSG TA +++P + F+PD+I+V+ G+DA ++DPLA +Q T T+ +
Sbjct: 230 PLHAGSGHTAYLHALDRIVIPALEAFQPDMIIVACGFDAAIVDPLARMQATAETFAAMTR 289
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
IK+ ++ LC + V EGGY+
Sbjct: 290 KIKETSQKLCDGKLVLVHEGGYS 312
>gi|190409024|gb|EDV12289.1| histone deacetylase [Saccharomyces cerevisiae RM11-1a]
gi|256269484|gb|EEU04772.1| Hda1p [Saccharomyces cerevisiae JAY291]
gi|290770994|emb|CAY82163.2| Hda1p [Saccharomyces cerevisiae EC1118]
Length = 706
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEIIDKVIRLQS 425
>gi|448684240|ref|ZP_21692705.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula japonica DSM 6131]
gi|445783113|gb|EMA33949.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula japonica DSM 6131]
Length = 335
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 144/279 (51%), Gaps = 10/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E A VD + VH Y++ + D T A T+ +LA+
Sbjct: 38 VEYVAADDADVDLVREVHDTDYIAEFREFCDDGGGNW------DADTVAVEETWDAALAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + + ++ + D P F+L RPPGHHA+ MGFC F N A A A
Sbjct: 92 AGLAVWVAEAALDGNSGRDTP--FSLGRPPGHHAVGDDAMGFC-FINNAAVAAQAALEAD 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
+RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG I+E G GD +G+ LN+
Sbjct: 149 AERVAIFDWDVHHGNGTQDIFYDRSDVFYASIHEDGLYPGTGDIEETGTGDADGTNLNVK 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G+ E I P + + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 209 YKPGADTADYLAAIDECIAPAMEDYDPDLLLISAGFDAHEHDPISRMRVSTEGYGAMTDR 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++ L D C + LEGGY L++LS SV F G
Sbjct: 269 MRSLT-DACDAALGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|51246683|ref|YP_066567.1| hypothetical protein DP2831 [Desulfotalea psychrophila LSv54]
gi|50877720|emb|CAG37560.1| hypothetical protein DP2831 [Desulfotalea psychrophila LSv54]
Length = 324
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 112/189 (59%), Gaps = 2/189 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +IRPPGHHA P GFC + NV IAARY Q +G +RV +IDFD HHGNG
Sbjct: 122 FCVIRPPGHHAEKGKPFGFCFYNNVLIAARYWQEKYGRRRVAVIDFDAHHGNGIQAGLER 181
Query: 156 DPDIFFLSTHQ--DGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPC 213
DP ++S H+ SYPGTG +E+G G G+G+ LNLPL G+GD V E + P
Sbjct: 182 DPKSLYISIHEHPSFSYPGTGFAEEIGTGLGKGTILNLPLSPGAGDDQFLAVMRERVEPF 241
Query: 214 AQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
+ ++PD +LV+AG+D H D ++ L ++T +Y + + K G R V LEGGY
Sbjct: 242 LEEWRPDCLLVAAGFDGHRADDMSGLGYSTALFYQIGKQVSSWGKRFAGGRVVSILEGGY 301
Query: 274 NLNSLSYSV 282
L+ L SV
Sbjct: 302 ELSVLGESV 310
>gi|237748840|ref|ZP_04579320.1| histone deacetylase superfamily protein [Oxalobacter formigenes
OXCC13]
gi|229380202|gb|EEO30293.1| histone deacetylase superfamily protein [Oxalobacter formigenes
OXCC13]
Length = 311
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 141/264 (53%), Gaps = 11/264 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH YV+ + +A G + ++G G T + T+ + GA VD V K
Sbjct: 59 VHTPEYVNRIATIRPKA---GYVPLDG-GDTVMSPGTWDCVMTCVGAACMGVDLVM--KG 112
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
D + RP GHHA P MGFCVF + A+A YA + L RV ++DFDVHHGNG
Sbjct: 113 EADNV--YCATRPCGHHAEPDRAMGFCVFNHAAVATAYAYDKYKLDRVALVDFDVHHGNG 170
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
+ DAFY P+IF+ S HQ YPG+G E G + + +N+PL G+G R
Sbjct: 171 SQDAFYHRPEIFYASCHQSPFYPGSGARYETGI---DHNIVNVPLSRGAGSDKFRNCMTF 227
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
I+P ++F P +++SAG+DAH DPL L FT YY + + ++A + C R V
Sbjct: 228 EILPALKKFNPSFLIISAGFDAHKKDPLGGLAFTDDDYYWVTKELMKVADECCDGRIVSI 287
Query: 269 LEGGYNLNSLSYSVADSFRAFLGE 292
LEGGY+L L+ A RA +G+
Sbjct: 288 LEGGYSLEGLASGSAAHVRALMGK 311
>gi|302383903|ref|YP_003819726.1| histone deacetylase superfamily protein [Brevundimonas
subvibrioides ATCC 15264]
gi|302194531|gb|ADL02103.1| histone deacetylase superfamily [Brevundimonas subvibrioides ATCC
15264]
Length = 306
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 148/272 (54%), Gaps = 15/272 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+V D+ +H AYVS + ++ + QG+ ++ T ++ + + + AAGA I V
Sbjct: 49 AAVTDLERIHPAAYVS---RMIEASPAQGLAQLDAD--TILSSGSVRAARLAAGAVIDAV 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+VA + FA +RPPGHHA P MGFC+F NVA+AAR AQ G+ RV ++D
Sbjct: 104 RAVAEGRT----ARAFAAVRPPGHHAEPDQAMGFCLFSNVAVAARVAQTL-GMARVAVVD 158
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT AF D +F S HQ YPGTG E G G+ +N+ + +
Sbjct: 159 FDVHHGNGTQAAFEADDSLFLASIHQMPLYPGTGAPSETGVGN----IVNVAVEPHAARE 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+ R F ++P F PDLIL+SAG+DAH DPLA + + ++A+
Sbjct: 215 SWRASFAGGLMPALDDFAPDLILISAGFDAHRRDPLAHQSLEAEDFAWATRAVLEVARRR 274
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
CG + V LEGGY+L L S RA LGE
Sbjct: 275 CGGKVVSSLEGGYDLEGLGRSALAHIRA-LGE 305
>gi|207341624|gb|EDZ69626.1| YNL021Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 690
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 110 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 169
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 170 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 225
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 226 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 285
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 286 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 345
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 346 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 396
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 397 VIEMIDKVIRLQS 409
>gi|126656090|ref|ZP_01727474.1| hypothetical protein CY0110_03369 [Cyanothece sp. CCY0110]
gi|126622370|gb|EAZ93076.1| hypothetical protein CY0110_03369 [Cyanothece sp. CCY0110]
Length = 306
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 150/266 (56%), Gaps = 19/266 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I +HA YV G++ + G I G T + ++ +L A A + VD V
Sbjct: 59 ITKIHADNYVKGVQALAAKGG--GFI----DGDTVVSPQSYNVALLAVNAWLDGVDQVLE 112
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
++ +P F L RPPGHHA+ K MGFC+F N AIAA YA G++RV I+D+DVHH
Sbjct: 113 TQ-KP----AFVLCRPPGHHAVQKTGMGFCLFSNAAIAADYALECDGIERVAILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT ++P+I + S HQ +YPGTG+ E G+ G+ LN+P+ GS +
Sbjct: 168 GNGTQAIVENNPNIAYCSLHQFPAYPGTGRETETGK---YGNVLNIPMEPGSDIKKYQVA 224
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F + ++P ++F+ D+++VSAGYDA+ DPLAS+ Y + + + SR
Sbjct: 225 FDQQVIPFLEKFQGDILIVSAGYDANQADPLASINLQPKDYGIFTQKLLTVT-----SRL 279
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFLG 291
+F LEGGY+L++L+ SV + +G
Sbjct: 280 LFGLEGGYDLSALAESVLATIEVCVG 305
>gi|297617259|ref|YP_003702418.1| histone deacetylase superfamily protein [Syntrophothermus
lipocalidus DSM 12680]
gi|297145096|gb|ADI01853.1| histone deacetylase superfamily [Syntrophothermus lipocalidus DSM
12680]
Length = 467
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 154/264 (58%), Gaps = 20/264 (7%)
Query: 63 ATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHA--IPKGPMGFCVFGNV 120
A + L AAG + + D++ + R GFAL+RPPGHH+ + G GFC N
Sbjct: 87 AQITEAHLVAAGGALVIADALMNGEVRN----GFALVRPPGHHSMRVTHGNRGFCNINNE 142
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDE 178
I Y ++ +G+KR+ I+D DVHHG+GT D ++ DPD+ F+S HQDG YPG+G DE
Sbjct: 143 PIMIEYLRKKYGIKRIAIVDTDVHHGDGTQDIYWHDPDVLFISFHQDGRTLYPGSGFTDE 202
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
+G G+TLN+PLP G+ DT + V E+++P ++F+P+L++ SAG D H DPLA+
Sbjct: 203 IGGPLALGTTLNVPLPPGTTDTGINFVLEELVLPVLEKFQPELVVNSAGQDNHYTDPLAN 262
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNS-LSYSVADSFRAFLG-EPSKA 296
++F+ Y +L ++LA D+ LEGGY++ + L Y A G + S
Sbjct: 263 MRFSARGYAVLN---ERLAPDIA------VLEGGYSVETALPYVNLGILMAMAGIDYSNL 313
Query: 297 SEFDNPAILYEEPSAKVKQAIERV 320
E D A + E S +++ +ER+
Sbjct: 314 YEPDYQADKFRESSDRMR-VLERI 336
>gi|321460654|gb|EFX71695.1| hypothetical protein DAPPUDRAFT_308757 [Daphnia pulex]
Length = 357
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 95/277 (34%), Positives = 148/277 (53%), Gaps = 12/277 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ +H YV L ++ L + T+Q +L +AG+ + +V
Sbjct: 43 ATREELLWLHTADYVDELSATSEKKQSILTALERQYDSVFLCPETYQAALLSAGSSLQVV 102
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+S+ + ++R GFA+IRPPGHHA GFC F N A+AA+YA H L+R+ I+D
Sbjct: 103 ESILSGESRS----GFAVIRPPGHHAESDEAFGFCYFNNTALAAKYAIENHQLERILIVD 158
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSY---PGTGKIDEVGRGDGEGSTLNLPLPG-G 196
+D+HHGNG F +DP + ++S H+ + P + VG G G G +N+ P G
Sbjct: 159 WDIHHGNGIQKMFEEDPRVLYISLHRLDIFPFNPENCDCNMVGTGPGVGFNVNIAWPSKG 218
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
GD+ F +I+P A ++ P L+LV+AG+DA + DPL + + Y + + L
Sbjct: 219 MGDSEYLAAFRRIIMPIANQYNPQLVLVAAGFDAALGDPLGGCKVSPEGYGQMCHMLTSL 278
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A+ R LEGGYNL S+S S+ A LG+P
Sbjct: 279 AE----GRVAVLLEGGYNLKSVSDSMLMCANALLGDP 311
>gi|448680566|ref|ZP_21690883.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula argentinensis DSM 12282]
gi|445769010|gb|EMA20087.1| acetoin utilization protein/histone deacetylase superfamily
[Haloarcula argentinensis DSM 12282]
Length = 335
Score = 174 bits (441), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 144/279 (51%), Gaps = 10/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E A +D + VH Y+ + D T A T+ +LA+
Sbjct: 38 VEYVTADDADIDLVREVHDADYIEEFREFCDDGGGNW------DADTVAVEETWDAALAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + ++ D P F+L RPPGHHA+ MGFC NVA+AA+ A A
Sbjct: 92 AGLAVWAAEAALDGNTGRDTP--FSLGRPPGHHAVGDDAMGFCFINNVAVAAQAALEAD- 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG I+E G GD +G+ LN+
Sbjct: 149 ADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHEDGLYPGTGDIEETGTGDADGTNLNVK 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G+ E I P + + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 209 YKPGADTADYLAAIDECIAPAIEDYDPDLLLISAGFDAHEHDPISRMRVSTEGYGAMTNR 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++ L D C + LEGGY L++LS SV F G
Sbjct: 269 MRSLT-DTCDAALGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|323331992|gb|EGA73404.1| Hda1p [Saccharomyces cerevisiae AWRI796]
Length = 641
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 61 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 120
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 121 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 176
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 177 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 236
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 237 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 296
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 297 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 347
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 348 VIEIIDKVIRLQS 360
>gi|394987822|ref|ZP_10380661.1| histone deacetylase [Sulfuricella denitrificans skB26]
gi|393793041|dbj|GAB70300.1| histone deacetylase [Sulfuricella denitrificans skB26]
Length = 307
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 139/271 (51%), Gaps = 15/271 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + +A VH Y+ ++ A A Q G++ ++ T T +L AAGA +
Sbjct: 51 ATFEQLARVHKPQYIEAVQAA---APQHGLVYLDPD--TAMNPFTLNAALRAAGAVVLAT 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V K F IRPPGHHA MGFC+F NVA+ +A +GLKRV I D
Sbjct: 106 DLVLERKVEN----AFCAIRPPGHHAESGRAMGFCLFNNVAVGVAHAIEHYGLKRVAIAD 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT + F+DDP + ST Q YP G G +N+PLP G+
Sbjct: 162 FDVHHGNGTEEIFHDDPRVMLCSTFQSPFYPYCGA------DSGNDHIINVPLPAGTDGA 215
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A R E +P +RF+P+++ +SAG+DAH D +A + Y + +K +A+
Sbjct: 216 AFRQAVSERWLPALERFQPEMLFISAGFDAHWEDDMAMFKLKEADYAWVTQQVKDVAEKH 275
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY L++L SVA + G
Sbjct: 276 AQGRIVSALEGGYELHALGRSVAAHIKVLSG 306
>gi|254491437|ref|ZP_05104616.1| Histone deacetylase family, putative [Methylophaga thiooxidans
DMS010]
gi|224462915|gb|EEF79185.1| Histone deacetylase family, putative [Methylophaga thiooxydans
DMS010]
Length = 327
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 121/212 (57%), Gaps = 5/212 (2%)
Query: 64 TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKG-PMGFCVFGNVAI 122
T F +L A A +A VD+V + R F RPPGHHA+ G GFC F ++A+
Sbjct: 101 THFDSALLATSASLAAVDAVMLGQVRN----AFCASRPPGHHALNTGQEEGFCFFNHIAV 156
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRG 182
AA+YAQ+ + + ++ IID+D HHGNGT AFYDDP + F STH +YPGTG + G
Sbjct: 157 AAKYAQQQYKIDKILIIDWDYHHGNGTEWAFYDDPSVLFFSTHDQYAYPGTGSPLKKGDK 216
Query: 183 DGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+ L GS D + F + + P + F+P+LIL+SAG+D+ D L T
Sbjct: 217 AGLGFNINVHLECGSDDETIMAAFKQHLAPAIETFEPELILISAGFDSRQDDLLGCFNIT 276
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+Y L + +A C SR V LEGGYN
Sbjct: 277 DQGFYQLTRWVMTMADKYCQSRLVSILEGGYN 308
>gi|167561020|ref|ZP_02353936.1| histone deacetylase family, putative [Burkholderia oklahomensis
EO147]
Length = 371
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/293 (38%), Positives = 163/293 (55%), Gaps = 11/293 (3%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
F+ A+ + + VH Y+ L +A A +Q + L E + +A+T + + AAGA
Sbjct: 62 FASATDEQLLRVHRPEYLRQLAEACAVAGEQVVPLGEDAA---GSASTERVARLAAGAAC 118
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVF 137
A VD+V R +ALIRP GHHA MG+C + NVAIAAR+AQ AHG++RV
Sbjct: 119 AAVDTVMTGPLRQ----AYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGIERVA 174
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGG 196
I+D+DVHHGNGT FYDDP + F+S H+ ++P G+ E G G G G +N+PLP G
Sbjct: 175 IVDWDVHHGNGTQQVFYDDPSVLFVSLHEAENFPVDGGEARETGGGAGAGYNVNVPLPSG 234
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
+GD + F E+++P F P LILVSAG DA+ DPL ++ + +A ++Q
Sbjct: 235 TGDAGYQHAFDELVLPLIDAFAPQLILVSAGQDANAFDPLGRMRVQRNGFRQMARALRQA 294
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
A +C R EGGY+L L + +G + FD+P + + P
Sbjct: 295 AGGVCDGRIAMLQEGGYSLPYLPIATLGVLEGLVGWDAP---FDDPHLFVQHP 344
>gi|428221982|ref|YP_007106152.1| deacetylase [Synechococcus sp. PCC 7502]
gi|427995322|gb|AFY74017.1| deacetylase, histone deacetylase/acetoin utilization protein
[Synechococcus sp. PCC 7502]
Length = 311
Score = 174 bits (440), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/262 (40%), Positives = 145/262 (55%), Gaps = 25/262 (9%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
+I H+ Y+ + KA+ S QG +++ T + ++Q + A A + VD V
Sbjct: 63 EIEKCHSSKYIDQV-KAI---SAQGHGMLDAD--TVLSQNSYQVAQLAVSAWLDGVDQVL 116
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
S D P+ F L RPPGHHA+ MGFC+F N AIAA YA +G++RV I+D+DVH
Sbjct: 117 KS----DKPV-FILSRPPGHHAVRDSGMGFCIFNNGAIAANYALEQYGVERVAILDWDVH 171
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNGT D ++ P I ++S HQ YPGTG E G G + LNLPLP S
Sbjct: 172 HGNGTQDIVWNQPQIAYISIHQAPFYPGTGWQAERG---GHENILNLPLPSESAIATYLP 228
Query: 205 VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLC--- 261
VF + ++P Q FKPDL+++SAG+DA+ DPLAS+ Y + +LC
Sbjct: 229 VFTQRVIPFLQDFKPDLLIISAGFDANSADPLASMNLQPQDYGVFT--------ELCLGV 280
Query: 262 GSRCVFFLEGGYNLNSLSYSVA 283
SR + LEGGY SLS SV
Sbjct: 281 TSRILLGLEGGYEFQSLSQSVV 302
>gi|333906723|ref|YP_004480309.1| histone deacetylase superfamily protein [Marinomonas posidonica
IVIA-Po-181]
gi|333476729|gb|AEF53390.1| histone deacetylase superfamily [Marinomonas posidonica
IVIA-Po-181]
Length = 307
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/270 (36%), Positives = 141/270 (52%), Gaps = 15/270 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + + H YV + RA ++G + +E T T + SL AAGA + V
Sbjct: 51 ATREQLVAAHQPDYVDSI---FARAPEEGHVELEAE--TIMMPHTLEASLYAAGAVVKAV 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + F +RPPGHHA MGFCVF N+A+ RYA +GL+RV I+D
Sbjct: 106 DLVMTQQVDN----AFCAVRPPGHHAEFDKAMGFCVFNNIAVGTRYATAQYGLERVAIVD 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F D + + S++Q YP + G + L++PL GSG
Sbjct: 162 FDVHHGNGTEDIFKQDQKVLYASSYQHPFYPYSDP------GASHDNILHMPLEAGSGSA 215
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A R V + ++P FKP LI++SAG+DAH DP+ L+ Y + + A+
Sbjct: 216 AFRQVIMDQLMPALNDFKPQLIMISAGFDAHKEDPMGQLRLDEADYTWITEQLCDAAERH 275
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
C R V LEGGYN+++L + R+ +
Sbjct: 276 CDGRIVSVLEGGYNIDALGRAAFCHIRSLM 305
>gi|302850072|ref|XP_002956564.1| hypothetical protein VOLCADRAFT_97594 [Volvox carteri f. nagariensis]
gi|300258091|gb|EFJ42331.1| hypothetical protein VOLCADRAFT_97594 [Volvox carteri f. nagariensis]
Length = 1124
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 129/204 (63%), Gaps = 1/204 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+AL+RPPGHHA MGFC+F NVA+AA +A GL+RV I+DFDVHHGNGT F
Sbjct: 858 YALVRPPGHHAERDQGMGFCIFNNVAVAAAHALSVRGLRRVAIVDFDVHHGNGTQHMFES 917
Query: 156 DPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP + F+S HQD +YP +G + E G G GEG+TLN+PLP GSG A + F ++ P
Sbjct: 918 DPRVMFISLHQDSNYPLRSGYMTENGVGQGEGTTLNVPLPPGSGSGAYQAAFTRLVRPAL 977
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ FKP+L+LVSAGYDA +D LA++ ++ + + + + A+ LCG R V EGGY+
Sbjct: 978 EIFKPELLLVSAGYDASYMDNLAAMILSSADFGWMMRQLVEAAESLCGGRLVALHEGGYS 1037
Query: 275 LNSLSYSVADSFRAFLGEPSKASE 298
+ + + A GE ++ +
Sbjct: 1038 ELYVPFCGLAALEALSGEKTEVQD 1061
>gi|321474949|gb|EFX85913.1| hypothetical protein DAPPUDRAFT_98501 [Daphnia pulex]
Length = 721
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 140/252 (55%), Gaps = 16/252 (6%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y +T+Q SL AAG+ + LV ++ K R G A+IRPPGHHA+ G+C + N
Sbjct: 93 YIHPSTYQLSLLAAGSTVELVSNILDGKIRN----GMAIIRPPGHHAMKSEYCGYCFYNN 148
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKI 176
VAIA ++A GLKR+ I+D+D+HHG T FYDDP + + S H Q+G+ +P +
Sbjct: 149 VAIATQHALDNRGLKRILIVDWDIHHGQATQQMFYDDPRVLYFSIHGFQNGAFWPHLRES 208
Query: 177 D--EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
D +GRG G G +N+P+ G++ +FH++++P A F P+LI+VSAGYDA +
Sbjct: 209 DYHNIGRGAGLGYNINVPMNEVKMGNSDYMAIFHQLLLPIAYEFNPELIIVSAGYDAALG 268
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
P ++ T Y ++ LA R LEGGY L SLS A + R LG+P
Sbjct: 269 CPEGEMEITPACYSHFTNSLMGLA----NGRLAVVLEGGYCLKSLSEGAALTLRTLLGDP 324
Query: 294 SK--ASEFDNPA 303
S D P
Sbjct: 325 CPPLLSNLDTPT 336
>gi|383934304|ref|ZP_09987746.1| histone deacetylase/AcuC/AphA family protein [Rheinheimera
nanhaiensis E407-8]
gi|383704760|dbj|GAB57837.1| histone deacetylase/AcuC/AphA family protein [Rheinheimera
nanhaiensis E407-8]
Length = 305
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 104/279 (37%), Positives = 139/279 (49%), Gaps = 15/279 (5%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+++ ++ SPA + H++ YV ++ +A +G I ++ T + +L
Sbjct: 42 VLQQRDASPAVKQQLYRAHSQLYV---DEIYAKAPTEGYIWLDPD--TQMMRHSLDAALH 96
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAGAGI VD V ++ F +RPPGHHA MGFC+F NVAIAA +A H
Sbjct: 97 AAGAGIDAVDLVLKQSDQQ----AFCSVRPPGHHATRDQAMGFCIFNNVAIAALHALSQH 152
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
GL+RV I+DFDVHHGNGT D D I F S+ Q YP G + NL
Sbjct: 153 GLERVAIVDFDVHHGNGTEDIVSGDERILFCSSFQSALYPYRDL------QSGAANVENL 206
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PLP R +P FKP LILVSAG+D H D +A Y+ +A
Sbjct: 207 PLPALCKPAQWREQIQHQWLPRLNAFKPQLILVSAGFDGHREDDMAQFLLVEDDYHWIAR 266
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+KQLA C R V LEGGY L++L SV + +
Sbjct: 267 QLKQLADQHCQGRLVAMLEGGYALSALGRSVVAFLKGLM 305
>gi|114438941|gb|ABI74745.1| putative histone deacetylase [Monascus purpureus]
Length = 764
Score = 174 bits (440), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 156/321 (48%), Gaps = 26/321 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
I+++N A+V++I VH + +E D + Q I L Y TF +L +
Sbjct: 179 IDVRN---ATVEEICLVHTPEHYIFVESTKDMSDDQLIDLEHTRDSIYFNKLTFASALLS 235
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G I +VA K + A++RPPGHHA MGFC+F NV++AAR Q+ G
Sbjct: 236 TGGAIETCLAVATRKVKN----AIAVVRPPGHHAEHDKTMGFCLFNNVSVAARVCQKQLG 291
Query: 133 LK--RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPG--TGKIDEVGRGDGE 185
K ++ I+D+DVHHGNG AFY DP++ ++S H YPG G D G G G
Sbjct: 292 EKCRKIMILDWDVHHGNGIQKAFYSDPNVLYISFHVYAGGKYYPGGDEGNWDHCGAGPGL 351
Query: 186 GSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G +N+P P G GD F ++++P A F PDL++V++G+DA D L T
Sbjct: 352 GRNVNIPWPQQGMGDGDYMFAFQQIVMPIANEFDPDLVIVASGFDAAAGDELGGCFVTPA 411
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
Y A + + L + LEGGYN S+S S + +GEP +
Sbjct: 412 CY----AQMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGEPPD-------RL 460
Query: 305 LYEEPSAKVKQAIERVKHIHS 325
L PS Q + +V I S
Sbjct: 461 LSTSPSTFATQTVRQVMMIQS 481
>gi|325917322|ref|ZP_08179540.1| deacetylase, histone deacetylase/acetoin utilization protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325536456|gb|EGD08234.1| deacetylase, histone deacetylase/acetoin utilization protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 302
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 115/187 (61%), Gaps = 4/187 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ I+DFDVHHGNGT F
Sbjct: 111 AFCAVRPPGHHATAQVSMGFCLFNNIAVAAAHARDRHGLERITIVDFDVHHGNGTQAIFE 170
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 171 RDPAVQYLSTHQSGLYPHSGSVHE----RGVGNIHNLLLPPGSDGLRFRNVWEDEMLPLI 226
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P LIL+SAG+DAH+ DPLA L + L ++ LA+ R V LEGGY+
Sbjct: 227 DAFRPQLILISAGFDAHLRDPLADLMLDGDDFAWLTGALRALAERHARGRVVSMLEGGYD 286
Query: 275 LNSLSYS 281
L +L S
Sbjct: 287 LQALRES 293
>gi|167568281|ref|ZP_02361155.1| histone deacetylase family, putative [Burkholderia oklahomensis
C6786]
Length = 373
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 166/301 (55%), Gaps = 11/301 (3%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
+E + F+ A+ + + VH Y+ L +A A +Q + L E + +A+T + +
Sbjct: 54 TERLTRIAFASATDEQLLRVHRPEYLRQLAEACAVAGEQVVPLGEDAA---GSASTERVA 110
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
AAGA A VD+V R +ALIRP GHHA MG+C + NVAIAAR+AQ
Sbjct: 111 RLAAGAACAAVDTVMTGPLRQ----AYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQA 166
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGST 188
AHG++RV I+D+DVHHGNGT FYDDP + F+S H+ ++P G+ E G G G G
Sbjct: 167 AHGIERVAIVDWDVHHGNGTQQVFYDDPSVLFVSLHEAENFPVDGGEARETGGGAGAGYN 226
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PLP G+GD + F E+++P F P LILVSAG DA+ DPL ++ +
Sbjct: 227 VNVPLPSGTGDAGYQHAFDELVLPLIDAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRQ 286
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
+A ++Q A +C R EGGY+L L + +G + FD+P + +
Sbjct: 287 MARALRQAAGGVCDGRIAMLQEGGYSLPYLPIATLGVLEGLVGWDAP---FDDPHLFVQH 343
Query: 309 P 309
P
Sbjct: 344 P 344
>gi|212541901|ref|XP_002151105.1| histone deacetylase HdaA [Talaromyces marneffei ATCC 18224]
gi|210066012|gb|EEA20105.1| histone deacetylase HdaA [Talaromyces marneffei ATCC 18224]
Length = 780
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 151/295 (51%), Gaps = 19/295 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH + + + + I+L E Y T+ +L +AG I
Sbjct: 190 ATKEEVELVHTDEHYQFVSDTQNLPDETLIMLEETRDSIYFNRLTYASALLSAGGAIETC 249
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV+IAA+ QR G +++ I
Sbjct: 250 LAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSIAAKVCQRQLGEACRKILI 305
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H DG YPG G D VG G G +N+P
Sbjct: 306 VDWDVHHGNGIQKAFYDDPNVLYMSLHVYADGKFYPGGKEGNWDHVGEVAGLGKNINIPW 365
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F +V++P A F PDL++V++G+DA D L T Y ++
Sbjct: 366 PSQGMGDGDYMYAFQQVVMPIATEFDPDLVIVASGFDAAAGDELGGCFVTPACY----SH 421
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS---KASEFDNPAI 304
+ + L + LEGGYN S+S S + +GEP A+ NPA+
Sbjct: 422 MTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGEPPARLAATTPSNPAV 476
>gi|71908132|ref|YP_285719.1| histone deacetylase superfamily protein [Dechloromonas aromatica
RCB]
gi|71847753|gb|AAZ47249.1| Histone deacetylase superfamily [Dechloromonas aromatica RCB]
Length = 321
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 15/269 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH +++ +++A + + G++ ++ T T+Q +L AAGAG V
Sbjct: 65 ATFEQLLRVHPASHLERIKRA---SPELGVVHLDPD--TAMNPHTWQAALRAAGAGCMAV 119
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + F +RPPGHH PMGFC F N+ +AAR+A + HGL+RV IID
Sbjct: 120 DLVLNKEVEN----AFCAVRPPGHHCEKATPMGFCFFNNIGVAARHALKVHGLERVAIID 175
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F D + S Q YP +G + N+PL G G
Sbjct: 176 FDVHHGNGTEDCFAGDEQVLMCSIFQHPFYPYSGA------DKPAANMCNVPLAAGCGGE 229
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R +V P + FKP +I +SAG+D H D + L+ + ++K+LA ++
Sbjct: 230 EFRDAVMQVWTPRLKEFKPQMIFISAGFDGHYEDDMGGLKLVEKDFAWCTEHLKKLAAEM 289
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
C R V LEGGY + SL+ SV RA
Sbjct: 290 CEKRIVSMLEGGYVMTSLARSVGAHLRAL 318
>gi|448320471|ref|ZP_21509958.1| histone deacetylase [Natronococcus amylolyticus DSM 10524]
gi|445605936|gb|ELY59851.1| histone deacetylase [Natronococcus amylolyticus DSM 10524]
Length = 339
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 158/301 (52%), Gaps = 17/301 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E P VD + VH R Y+ + + +G G T +E+ A
Sbjct: 38 VEYVEADPVGVDVMEGVHDRDYLESVRE----------FCADGGGNWDPDTTAVEETWEA 87
Query: 73 A--GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AG A + AA F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 VKYSAGQACWAAEAALDGADGRKTPFSIGRPPGHHAVYDDAMGFCFANNVAVAAQHALDT 147
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
+ RV I+D+DVHHGNGT D FYD D+FF S H++G YPGTG+++E G GDGEG+T+N
Sbjct: 148 RDVDRVAIVDWDVHHGNGTQDIFYDREDVFFASIHEEGLYPGTGQVEETGEGDGEGATMN 207
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+P+P G+ D + + + PDL+L+SAG+DAH DP++ ++ +T Y +L
Sbjct: 208 VPMPAGTDDRDYLEAVEGPVSSALEAYDPDLLLISAGFDAHRHDPISRIRLSTEAYALLT 267
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG----EPSKASEFDNPAILY 306
+ +A D + F LEGGY L+ L+ SVA F G EP D +L
Sbjct: 268 DRFRSVA-DRTDAALAFVLEGGYGLDVLADSVALVHETFDGREPIEPDDDCSPDAVELLE 326
Query: 307 E 307
E
Sbjct: 327 E 327
>gi|315049039|ref|XP_003173894.1| histone deacetylase clr3 [Arthroderma gypseum CBS 118893]
gi|311341861|gb|EFR01064.1| histone deacetylase clr3 [Arthroderma gypseum CBS 118893]
Length = 796
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 146/281 (51%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I VH + + ++ D + + + L Y + TF +L + G I
Sbjct: 214 ATEAEITLVHTKEHYEFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETC 273
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA K + A+IRPPGHHA MGFC+F NV++AAR Q G +++ I
Sbjct: 274 KAVAEEKVKN----AIAVIRPPGHHAESNKTMGFCLFNNVSVAARACQHVLGDKCRKILI 329
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG FY+DP++ ++S H +DGS YPG G D G G G G +N+P
Sbjct: 330 LDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNWDYCGEGLGLGKNVNIPW 389
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P F PDL+++SAG+DA D L T Y ++
Sbjct: 390 PTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----SH 445
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ ++ +L + LEGGYN S+S S R +GEP
Sbjct: 446 MTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 486
>gi|50308651|ref|XP_454328.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643463|emb|CAG99415.1| KLLA0E08383p [Kluyveromyces lactis]
Length = 704
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 106/313 (33%), Positives = 164/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A ++I VH+R ++ + + + + EG Y ++ + + G I
Sbjct: 122 AEEEEILQVHSRQHLDFISQTEQLERESLLKETEGGDSVYFNNDSYLSAKLSCGGAIEAC 181
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA +++ ++++ I
Sbjct: 182 KAVVEGRVKN----SIAVVRPPGHHAEPEIAGGFCLFSNVAVAAANMLKSYPESVRKIMI 237
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFYDD + ++S H Q G YPGT G D+ G G GEG N+
Sbjct: 238 VDWDIHHGNGTQKAFYDDDRVLYVSLHRYQLGKYYPGTIHGNYDQTGEGKGEGFNCNITW 297
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +VI+P + F+PDL+L+S+G+DA D + T Y +
Sbjct: 298 PTGGVGDAEYMWAFEQVIMPMGREFEPDLVLISSGFDAADGDTIGQCHVTPACYGHMTHM 357
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ LAK G+ CV LEGGYNL+S++ S + +GEP E P ++P+ +
Sbjct: 358 LLSLAK---GNLCV-VLEGGYNLDSIAKSALGVCKVLVGEP--PDELPAPK---KQPTPE 408
Query: 313 VKQAIERVKHIHS 325
K+ IE V S
Sbjct: 409 AKKMIETVIRTQS 421
>gi|337293697|emb|CCB91684.1| uncharacterized protein slr0245 [Waddlia chondrophila 2032/99]
Length = 318
Score = 173 bits (439), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/255 (40%), Positives = 137/255 (53%), Gaps = 10/255 (3%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGI---ILIEGSGPTYATATTFQESLAAAGAGIALVD 81
D+ H + Y+ L K + + Q + +G T + + ++ A GA IA VD
Sbjct: 52 DLLRCHTKGYIQTLIKDVAKCMQSRVHDGRYQLSTGDTQISPLSLLAAVKATGAVIAGVD 111
Query: 82 SVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDF 141
+V R D F L+RPPGHHA MGFC+F N A+ ARYAQ +++V IID+
Sbjct: 112 AVI----REDVKRVFCLVRPPGHHAESDQGMGFCLFNNAAVGARYAQTYKEIEKVAIIDW 167
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGG--SGD 199
DVHHGNGT FYDDP + + STHQ YPGTG +E G G G G+TLN P+ G S +
Sbjct: 168 DVHHGNGTQAIFYDDPTVHYSSTHQFPHYPGTGSREETGIGRGIGTTLNCPINAGKRSRE 227
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+R F I P +FKPDLI++SAG+D DPL T L + ++A
Sbjct: 228 EVLRA-FRTEIRPALDKFKPDLIIISAGFDLLEEDPLGGFNATVEDIVELTHIVNKIADV 286
Query: 260 LCGSRCVFFLEGGYN 274
R + LEGGY+
Sbjct: 287 HAEGRIISVLEGGYD 301
>gi|78043060|ref|YP_359135.1| histone deacetylase domain-containing protein [Carboxydothermus
hydrogenoformans Z-2901]
gi|77995175|gb|ABB14074.1| histone deacetylase domain protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 433
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/229 (44%), Positives = 131/229 (57%), Gaps = 20/229 (8%)
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPK--GPMGFCVFGNVAIAARYA 127
L AAG+ I L + + A + + GFAL+RPPGHHA G GFC NVAI Y
Sbjct: 77 LIAAGSCIELAERILAGEVKN----GFALVRPPGHHATRTVYGNRGFCNINNVAITVDYL 132
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGE 185
+ G+K++ IID DVHHG+GT D FY DPD+ F+S HQDG YPGTG IDE G +
Sbjct: 133 RWVKGVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQDGRTLYPGTGFIDEAGTPNAY 192
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+T+NLPLP GSGD + + E ++P + F+P+ I+ SAG D H DPLA + T
Sbjct: 193 GTTINLPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARG 252
Query: 246 YYMLAANIKQLAK-DLCGSRCVFFLEGGYNLN-SLSYSVADSFRAFLGE 292
Y I +L K DL LEGGY++ +L Y A GE
Sbjct: 253 Y----GRITELIKPDLA------VLEGGYSIEGALPYVNLAILLALYGE 291
>gi|83952525|ref|ZP_00961256.1| histone deacetylase/AcuC/AphA family protein [Roseovarius
nubinhibens ISM]
gi|83836198|gb|EAP75496.1| histone deacetylase/AcuC/AphA family protein [Roseovarius
nubinhibens ISM]
Length = 375
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G A VD V D G+ L RPPGHHA+P MG C+F N AI A+YAQ H
Sbjct: 120 AVGGVTAAVDEVMTG----DWDNGYVLCRPPGHHALPDKAMGSCLFANAAIGAKYAQERH 175
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLN 190
G+ RV ++D+DVHHGNGT FYDDP + +S HQD +P +G ++ +G G G G LN
Sbjct: 176 GIGRVAVVDWDVHHGNGTEAIFYDDPSVLTISLHQDNLFPLHSGPMEALGAGAGLGHNLN 235
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G+G + F E+++P F P+LI+V++G+D+ +DPL + Y +
Sbjct: 236 IPLPPGTGTGGYKHAFEELVLPALDAFAPELIVVASGFDSCAMDPLGMQMLKSSDYAWMM 295
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSY 280
+ +LA G R + EGGY+ + Y
Sbjct: 296 GQLMELAARHAGGRIIVTHEGGYSPQYVPY 325
>gi|347522586|ref|YP_004780156.1| histone deacetylase superfamily protein [Pyrolobus fumarii 1A]
gi|343459468|gb|AEM37904.1| histone deacetylase superfamily [Pyrolobus fumarii 1A]
Length = 351
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 130/231 (56%), Gaps = 11/231 (4%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+A +RPPGHHA + GFC+F N+A AA+ HGLKR+ IID D H G+GT + FYD
Sbjct: 118 YAAVRPPGHHAGKRRAAGFCLFNNIAYAAQRMIEDHGLKRIAIIDVDAHWGDGTAEIFYD 177
Query: 156 DPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPC 213
D+ ++S HQD YPG G +E+GRG+G G T+N+ +P + D +HE+ +P
Sbjct: 178 RRDVLYISFHQDPRTLYPGRGFPEELGRGEGLGYTVNIMMPPLATDQLYLKAWHEIAMPI 237
Query: 214 AQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
+R+KP LILVS G+DAH DPL L T Y+ L + LA+ L G LEGGY
Sbjct: 238 LERYKPQLILVSLGFDAHKDDPLTDLALTLEGYWALLREVLVLAERLTGRGLALMLEGGY 297
Query: 274 NLNSLSYSVADSFRAFLGE---PSKASEFDNPAILYEEPSAKVKQAIERVK 321
+L L V A L E P + + P E + ++ +ERVK
Sbjct: 298 DLRVLRDGV--RVVASLTEEEPPVREESVEAPG----ETVGRFRRFVERVK 342
>gi|218516884|ref|ZP_03513724.1| probable deacetylase protein [Rhizobium etli 8C-3]
Length = 217
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 110/186 (59%), Gaps = 3/186 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F RPPGHHA MGFC F N AIAAR+AQ+ HG +RV I+D+DVHHGNGT D F+D
Sbjct: 24 FVAARPPGHHAEKMTAMGFCFFNNAAIAARHAQKTHGAERVAIVDWDVHHGNGTQDIFWD 83
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
D + F STHQ YPG+G +E G+ + +N PL G R F ++P
Sbjct: 84 DASVLFCSTHQMPLYPGSGAKEEKGK---HNTIVNAPLSPNVGSDHFREAFKSRVLPALD 140
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+PDLI++SAG+DAH DPLA + T + + +LA +R V LEGGY+L
Sbjct: 141 DFRPDLIIISAGFDAHHRDPLAQINLTGEDFDWATGRVLELADRHAKNRVVSLLEGGYDL 200
Query: 276 NSLSYS 281
L+ S
Sbjct: 201 EGLAES 206
>gi|420138028|ref|ZP_14645970.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CIG1]
gi|421158417|ref|ZP_15617675.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 25324]
gi|421165975|ref|ZP_15624253.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 700888]
gi|421179056|ref|ZP_15636653.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa E2]
gi|451985157|ref|ZP_21933386.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudomonas aeruginosa 18A]
gi|403249177|gb|EJY62691.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CIG1]
gi|404539478|gb|EKA48959.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 700888]
gi|404547574|gb|EKA56568.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa E2]
gi|404549658|gb|EKA58506.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 25324]
gi|451757204|emb|CCQ85909.1| Deacetylases, including yeast histone deacetylase and acetoin
utilization protein [Pseudomonas aeruginosa 18A]
Length = 380
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/263 (35%), Positives = 149/263 (56%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
I+ A+ G R V EGGY+
Sbjct: 292 MIRDAAERHAGGRLVVVHEGGYS 314
>gi|209963896|ref|YP_002296811.1| histone deacetylase [Rhodospirillum centenum SW]
gi|209957362|gb|ACI97998.1| histone deacetylase [Rhodospirillum centenum SW]
Length = 308
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 145/268 (54%), Gaps = 13/268 (4%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
+ + VH +Y+ LE AM Q G ++ T + +++ +L +AGA A +D+V
Sbjct: 53 EQLERVHPASYLDSLEAAM---PQSGYATLDAD--TLVSPGSWEAALRSAGAVCAAIDAV 107
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
A + R F +RPPGHHA P MGFC+F NVA+ A +A RA GL+RV IIDFDV
Sbjct: 108 LAGEARN----AFCAVRPPGHHAEPDKAMGFCLFNNVAVGAAHA-RACGLRRVAIIDFDV 162
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT DP + +LSTHQ YPGTG E G D + +N L SG R
Sbjct: 163 HHGNGTQTYCQHDPSLLYLSTHQWPLYPGTGSAREHGDYD---NVVNACLGPMSGSPEFR 219
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
++P F+P+++L+SAG+DAH DP+A L + + + ++A
Sbjct: 220 HAVQTKLLPRLDAFRPEILLISAGFDAHSRDPMAGLHLMEDDFAWVTEKLGEVAAKHAAG 279
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFLG 291
R V LEGGY+L +L+ S A + +
Sbjct: 280 RMVSALEGGYDLRALANSAAVHVKVLMA 307
>gi|395820200|ref|XP_003783462.1| PREDICTED: histone deacetylase 10 [Otolemur garnettii]
Length = 736
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/317 (35%), Positives = 166/317 (52%), Gaps = 33/317 (10%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG---PTYATATTFQESLAAAGAGI 77
AS ++ VH+ Y++ + ++ L E SG Y +TF + AAGA +
Sbjct: 55 ASEAELGLVHSPEYIALIHGTQVLGKEE---LQELSGQYDAVYFHPSTFHCARLAAGAAL 111
Query: 78 ALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
LVD+V A N G AL+RPPGHH+ GFCVF NVAIAA +A++ HGL R
Sbjct: 112 QLVDAVLTGAVHN------GLALVRPPGHHSQRAAANGFCVFNNVAIAAEHAKQKHGLCR 165
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLN 190
+ I+D+D+HHG G F DDP + + S H+ + D VG+G G G T+N
Sbjct: 166 ILIVDWDIHHGQGIQYIFEDDPSVLYFSWHRYEHGRFWPFLRESNADAVGQGRGRGFTVN 225
Query: 191 LPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
LP G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T +
Sbjct: 226 LPWNQVGMGNADYMAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF--- 282
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
A++ QL + L G R LEGGY+L SL+ SV + +A LG +PA L P
Sbjct: 283 -AHLTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQALLG---------DPAPLLLGP 332
Query: 310 SAKVKQAIERVKHIHSL 326
+ A+E ++ + ++
Sbjct: 333 LMPCQSALESIQSVRAV 349
>gi|262041406|ref|ZP_06014610.1| histone deacetylase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259041260|gb|EEW42327.1| histone deacetylase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 649
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 139/258 (53%), Gaps = 7/258 (2%)
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A AG+A A K D ++L RPPGHH +P MGFC N+ IA A+
Sbjct: 389 IACLSAGLACAAVEAVLKGELDN--AYSLSRPPGHHCLPDQSMGFCFLANIPIAVERAKA 446
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGST 188
GL +V IID+DVHHGNGT + D+ +S HQDG +P G D+ G G GEG
Sbjct: 447 QLGLGKVAIIDWDVHHGNGTQHIYLQRDDVLTISLHQDGCFPPGYAGEDDRGVGAGEGYN 506
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
+N+PL G+GD + R +++P RF+P+LI+++ GYDA+ +DPLA +Q + ++
Sbjct: 507 INIPLLAGAGDDSWRYALETIVIPALARFEPELIIIACGYDANAMDPLARMQLHSDSFRA 566
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
+ ++Q A LCG + V EGGY + + + A G ++ + I ++
Sbjct: 567 MTEQVQQAADRLCGGKLVMVHEGGYAESYVPFCGLAVMEALSGIRTEVQDPLLEFIQQQQ 626
Query: 309 PSAKV----KQAIERVKH 322
P A +QAI+R+
Sbjct: 627 PRATFAQFQRQAIDRLAQ 644
>gi|88812613|ref|ZP_01127861.1| histone deacetylase/AcuC/AphA family protein [Nitrococcus mobilis
Nb-231]
gi|88790207|gb|EAR21326.1| histone deacetylase/AcuC/AphA family protein [Nitrococcus mobilis
Nb-231]
Length = 327
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 143/276 (51%), Gaps = 25/276 (9%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG------PTYATATTFQESLAAAG 74
A++++I VH R Y+ +Q +++I SG T + + + +L A G
Sbjct: 70 ATLEEIGRVHERRYI-----------EQILMMIPASGWRSLDPDTMISPASGEAALRAVG 118
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
A VD+V + R F +RPPGHH+ P MGFC+F NVA+ A A+ + +
Sbjct: 119 AVRQAVDAVMSGAAR----RVFCAVRPPGHHSEPARAMGFCLFNNVAVGALQARCRYAAR 174
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLP 194
+ ++DFDVHHGNGT + STHQ +P TG+ +E + G N+PLP
Sbjct: 175 NIAVVDFDVHHGNGTQTMLAGREGFLYTSTHQQPLFPNTGRREE----NRPGVLYNIPLP 230
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G+G A R F I+ F+PDLILVSAG+DAH DPLA L T Y +
Sbjct: 231 PGAGSAAFRKHFRSEIIAALADFRPDLILVSAGFDAHESDPLAELALTDDDYQWATEELV 290
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+A+ C R V LEGGYNL +L+ SVA A +
Sbjct: 291 AVAEACCQGRIVSTLEGGYNLQALARSVARHVAALM 326
>gi|432935583|ref|XP_004082033.1| PREDICTED: histone deacetylase 4-like [Oryzias latipes]
Length = 1084
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 177/336 (52%), Gaps = 36/336 (10%)
Query: 11 EIIELKNFSPASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATT 65
E+I + SP +++ +VH+ A+V + L + +D + + + G + T
Sbjct: 705 EVIRGRKASP---EELQTVHSEAHVQLYGTNPLRQRLDCSVNPVFVRLPCGGIGVDSDTI 761
Query: 66 FQE------SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
+ E + A G+ + LV VA+ + + GFA++RPPGHHA PMGFC F +
Sbjct: 762 WNEVHSSSAARLAVGSVVELVFKVASGELKN----GFAVVRPPGHHAEESTPMGFCYFNS 817
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKI 176
VAIAA+ Q+ + ++ I+D+DVHHGNGT AFY DP++ +LS H+ DG+ +PG+G
Sbjct: 818 VAIAAKLLQQRLNVSKILIVDWDVHHGNGTQQAFYADPNVLYLSLHRYDDGNFFPGSGAP 877
Query: 177 DEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA-- 230
DEVG G G G +N+ GG D F V++P A+ F PD++LVS+G+DA
Sbjct: 878 DEVGSGAGVGFNVNVAFTGGLEPPMADAEYLAAFRTVVMPIAKEFAPDMVLVSSGFDAVD 937
Query: 231 -HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
H PL + T+ + L + DL G R V LEGG++L ++ + A
Sbjct: 938 GHA-PPLGGYKVTSKCFGYLTRQL----MDLAGGRLVLALEGGHDLTAICDASEACISAL 992
Query: 290 LGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
LG E +L + P+A ++E+V HS
Sbjct: 993 LG---NELEPIPEEVLQQRPNANAVSSLEKVMETHS 1025
>gi|392573396|gb|EIW66536.1| hypothetical protein TREMEDRAFT_34982 [Tremella mesenterica DSM
1558]
Length = 732
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 155/297 (52%), Gaps = 24/297 (8%)
Query: 17 NFSPASVDDIASVHARAY---VSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
NF + + + VH + V G E D+ + + Y T + +
Sbjct: 117 NFHQVTFEQVMLVHTEDHWNKVQGTETLTDQYIKDSKYYYDQLS-LYVCRQTAHCARLSC 175
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G I SV + R FA++RPPGHHA P MGFC + NVA+A + QR
Sbjct: 176 GGVIQACISVCKGEVRN----AFAIVRPPGHHAEPDEHMGFCFYNNVAVATKEVQRLGLA 231
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGS--YPGT--GKIDEVGRGDGEGST 188
K+V I+D+DVHHGNGT AF++DPD+ ++S H+ DG YP + G +D VG G GEG +
Sbjct: 232 KKVLILDWDVHHGNGTQRAFWEDPDVLYMSIHRHDGGKFYPTSDFGALDMVGSGPGEGKS 291
Query: 189 LNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N+P P GG GD F ++I+P A F PDL+++SAG+DA D L + + T Y
Sbjct: 292 VNIPWPSGGFGDGDYIYAFQKIIMPIAYEFAPDLVIISAGFDAAKGDQLGACEVTPAAY- 350
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG------EPSKASE 298
++ + L G + V LEGGYNL ++S S + LG EP +ASE
Sbjct: 351 ---GHMTHMLCALAGGKVVVALEGGYNLTAISDSSLAVAQVLLGHTPPDLEPLEASE 404
>gi|188582421|ref|YP_001925866.1| histone deacetylase superfamily protein [Methylobacterium populi
BJ001]
gi|179345919|gb|ACB81331.1| histone deacetylase superfamily [Methylobacterium populi BJ001]
Length = 325
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 148/272 (54%), Gaps = 14/272 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
ASV ++ VH A+V + A + +G I+G T + + L A G V
Sbjct: 68 ASVAEL--VHPAAFVETIVAA---SPDEGFFQIDGD--TLMSPGSLNTCLHAIGGSNHAV 120
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + + F +RPPGHHA + MGFC+F + AIA R+AQ+A G RV ++D
Sbjct: 121 DAVM----KGECANAFVAMRPPGHHAERERAMGFCLFNHAAIAVRHAQKAFGATRVALVD 176
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG+ D F+ D + + STHQ +PG+G E RGD + + +N PL G
Sbjct: 177 FDVHHGNGSQDIFWSDKSVMYASTHQMPLFPGSGATGE--RGDHD-TIVNAPLKAFDGSE 233
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F I+P F PDL+++SAG+DAH LDPLA++Q + + ++A
Sbjct: 234 IFREAFEARILPRLDAFAPDLVVISAGFDAHKLDPLANIQLEEADFGWATRRLMEVADRH 293
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
G R V LEGGY+L+ L+ SVA A +G
Sbjct: 294 AGGRVVSILEGGYSLDGLARSVAAHVDALMGR 325
>gi|167834956|ref|ZP_02461839.1| histone deacetylase family protein [Burkholderia thailandensis
MSMB43]
Length = 256
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 132/237 (55%), Gaps = 8/237 (3%)
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
GA A VD+V R +ALIRP GHHA MG+C + NVAIAAR+AQ HG+
Sbjct: 1 GAACAAVDAVMTGPLRQ----AYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAVHGV 56
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLP 192
+RV I+D+DVHHGNGT FYDDP + F+S H+ ++P G+ E G G G G N+P
Sbjct: 57 ERVAIVDWDVHHGNGTQQVFYDDPSVLFVSLHEAANFPVDGGEARETGGGAGAGYNANVP 116
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G+GD F E+++P + F P LILVSAG DA+ DPL ++ + +A
Sbjct: 117 LPSGTGDAGYAHAFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARA 176
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
++Q A C R V EGGY+L L + +G + FD+P + P
Sbjct: 177 LRQAAGSTCDGRIVMLQEGGYSLPYLPIATLGVLEGLVG---WNAPFDDPHQFAQHP 230
>gi|348517955|ref|XP_003446498.1| PREDICTED: histone deacetylase 5-like [Oreochromis niloticus]
Length = 1131
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 174/333 (52%), Gaps = 47/333 (14%)
Query: 21 ASVDDIASVHARAYV-----SGL-------EKAMDRASQQGIILIEGSGPTYATATTFQE 68
AS+D+I SVH+ + S L +K + SQ+ ++ G + T + E
Sbjct: 746 ASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNE 805
Query: 69 SLAAA------GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
++A G+ I L VAA + + GFA++RPPGHHA MGFC F +VAI
Sbjct: 806 MHSSAAVRMAVGSVIELAFRVAAGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAI 861
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEV 179
A+ Q+ G+ ++ I+D+D+HHGNGT AFY DP++ ++S H+ DG+ +PG+G +EV
Sbjct: 862 TAKLLQQKLGVGKILIVDWDIHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPEEV 921
Query: 180 GRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
G G G G +N+ GG GD T F V++P AQ+F PD++LVSAG+DA
Sbjct: 922 GSGAGVGFNVNIAWTGGVDPPMGDVEYLTAFRTVVMPIAQQFSPDVVLVSAGFDA----- 976
Query: 236 LASLQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ Q G Y + A + QL L G R V LEGG++L ++ + A LG+
Sbjct: 977 VEGHQSPLGGYNVSAKCFGQLTQLLMGLAGGRVVMALEGGHDLTAICDASEACVSALLGD 1036
Query: 293 PSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
P E+P K ++ERV I S
Sbjct: 1037 PWP----------QEKPCPKAYASLERVIEIQS 1059
>gi|218199973|gb|EEC82400.1| hypothetical protein OsI_26768 [Oryza sativa Indica Group]
Length = 695
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 26 IASVHARAYVSGLEKAMDRA--SQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
IASVH++ ++ + + S++ I + + Y + + + AAG+ I + + V
Sbjct: 68 IASVHSQNHIKLMRSISSKEYDSRRNKIARKFNS-IYFNKGSSESAFLAAGSVIEVAEKV 126
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH---GLKRVFIID 140
AA + AL+RPPGHHA MGFC+F NVAIAA Y G+K++ I+D
Sbjct: 127 AAGELSS----AIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVD 182
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDE--VGRGDGEGSTLNLPLP- 194
+DVHHGNGT FY DP + F S H+ GS YP G +G GDG+G +N+P
Sbjct: 183 WDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEH 242
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD + V++P A+ F PD++LVSAG+DA + DPL T Y +L +
Sbjct: 243 GKCGDADYIAAWDHVLLPVAETFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLL 302
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
A+ R V LEGGYNL S++ SV+ + LG+ + FD P + E S +V
Sbjct: 303 GFAQ----GRIVMALEGGYNLRSIANSVSACAKVLLGDKFR---FDTPDMQPFESSWRVI 355
Query: 315 QAI 317
QA+
Sbjct: 356 QAV 358
>gi|346723781|ref|YP_004850450.1| histone deacetylase family protein [Xanthomonas axonopodis pv.
citrumelo F1]
gi|346648528|gb|AEO41152.1| histone deacetylase family protein [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 302
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ I+DFDVHHGNGT F
Sbjct: 111 AFCAVRPPGHHATAQVSMGFCLFNNIAVAAAHARDRHGLERITIVDFDVHHGNGTQAIFE 170
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 171 RDPTVQYLSTHQSGLYPHSGSVYE----RGVGNIHNLLLPPGSDGLRFRNVWEDEMLPLV 226
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P LIL+SAG+DAH+ DPLA L + L ++ LA R V LEGGY+
Sbjct: 227 DAFRPQLILISAGFDAHLRDPLADLMLDDEDFAWLTGALRTLADRHARGRVVSMLEGGYD 286
Query: 275 LNSLSYS 281
L +L S
Sbjct: 287 LQALRES 293
>gi|183985772|gb|AAI66352.1| LOC100158627 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 160/298 (53%), Gaps = 32/298 (10%)
Query: 46 SQQGIILIEGSGPTYATATTFQE------SLAAAGAGIALVDSVAASKNRPDPPLGFALI 99
SQ+ +++ G + T + E + AAG+ I L VA+ + + GFAL+
Sbjct: 199 SQRMFVMLPCGGLGVDSDTIWNELHSSNAARWAAGSVIDLAFKVASRELKN----GFALV 254
Query: 100 RPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDI 159
RPPGHHA P MGFC F +VAIAA+ Q ++++ I+D+DVHHGNGT FY DP++
Sbjct: 255 RPPGHHADPSTAMGFCFFNSVAIAAKQLQLRRDVRKILIVDWDVHHGNGTQRVFYTDPNV 314
Query: 160 FFLSTHQ--DGS-YPGTGKIDEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVP 212
++S H+ DG+ +PG+G DEVG G+GEG +N+ GG GD T F V++P
Sbjct: 315 LYISLHRHDDGNFFPGSGAADEVGAGNGEGFNVNVAWTGGLDPPMGDVEYLTAFRTVVMP 374
Query: 213 CAQRFKPDLILVSAGYDA---HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
A F PD++LVSAG+DA H PL + T + + + LA G R V L
Sbjct: 375 IAHEFSPDVVLVSAGFDAAEGHPA-PLGGYKVTAKCFGHMTRQLMSLA----GGRVVLAL 429
Query: 270 EGGYNLNSLSYSVADSFRAFLGEPSKASEFD--NPAILYEEPSAKVKQAIERVKHIHS 325
EGG++L S+ + A LG +E D L + P+ ++E V H+ S
Sbjct: 430 EGGHDLTSICDASEACVSALLG-----NELDPLPEETLRQRPNQNAVCSLETVIHVQS 482
>gi|217977029|ref|YP_002361176.1| histone deacetylase superfamily protein [Methylocella silvestris
BL2]
gi|217502405|gb|ACK49814.1| histone deacetylase superfamily [Methylocella silvestris BL2]
Length = 309
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 137/268 (51%), Gaps = 12/268 (4%)
Query: 24 DDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
D + VH +YV + A A +G + + + T++ + G +A VD V
Sbjct: 53 DALLHVHPESYVESIRAA---APAEG--FFDLADDVVMSPGTWEALSHSVGGAVAAVDDV 107
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDV 143
+++ F +RPPGHHA MGFC F AIAAR Q AHG +RV I+DFDV
Sbjct: 108 MRRRSKN----AFVAMRPPGHHAETARAMGFCFFNLAAIAARRGQSAHGAERVAIVDFDV 163
Query: 144 HHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HHGNGT F+ DP + + STHQ YP TG DE G G+ +N PLP +G R
Sbjct: 164 HHGNGTQQIFWSDPSVLYASTHQMPLYPFTGAADECGE---HGTIVNAPLPENAGSRMFR 220
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+ I+P F PDLI+VSAG+DAH DP+ L + + + ++A+
Sbjct: 221 EAMTQKILPRVDAFCPDLIVVSAGFDAHRFDPIGGLHLEVADFTWITTQLMEIAERRAKG 280
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFLG 291
V LEGGY+L +LS + + +G
Sbjct: 281 ALVSILEGGYDLIALSRCSSAHVQTLMG 308
>gi|270007657|gb|EFA04105.1| hypothetical protein TcasGA2_TC014342 [Tribolium castaneum]
Length = 863
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 149/276 (53%), Gaps = 20/276 (7%)
Query: 62 TATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
T TT+ E A A +A+ +V A D GFA++RPPGHHA P+ MGFC F +
Sbjct: 533 TDTTWNEVYTAPAARMAVGCTVDLAVRTWTGDIRNGFAVVRPPGHHAEPQQAMGFCFFNS 592
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKI 176
VAIAAR QR H + ++ I D+ VHHGNGT D FYDDP + +S H+ DG+ +PGTG
Sbjct: 593 VAIAARVLQREHRVHKILIFDWGVHHGNGTQDIFYDDPRVLVISMHRHDDGNFFPGTGSP 652
Query: 177 DEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH- 231
E G G G G +N+ GG D F +++P A+ F PD++LVSAG+DA
Sbjct: 653 GECGAGAGVGFNVNIAWSGGLNPPLADADYLAAFRAIVMPIAREFNPDIVLVSAGFDATD 712
Query: 232 -VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L PL + + + + + QLA+ R V LEGGY+L S+ S + R L
Sbjct: 713 GHLPPLGGYKVSAACFGHMTRQLMQLAR----GRVVLALEGGYDLPSICDSAEECVRVLL 768
Query: 291 GE-PSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
G+ PS + P+ L P A+++V + S
Sbjct: 769 GDSPSPIA----PSELARAPCGNAVLALQKVISVQS 800
>gi|156050425|ref|XP_001591174.1| hypothetical protein SS1G_07799 [Sclerotinia sclerotiorum 1980]
gi|154692200|gb|EDN91938.1| hypothetical protein SS1G_07799 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 778
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 26/291 (8%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQ----GIILIEGSGPTYATATTFQESLAAAGAG 76
AS D+I +VH + +E + S+ I+ G Y TF+ +L +AG
Sbjct: 156 ASKDEICTVHYAGHFEWVESLSKKTSEDLRELNTIMDAGRKSLYVGLCTFEAALISAGGA 215
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LK 134
I +V + A+IRPPGHHA +GFCVF NV +AA+ + +
Sbjct: 216 IETCKNVVEGHVKN----AIAVIRPPGHHAEANESLGFCVFNNVPVAAKICMLDYPKLCR 271
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--------GKIDEVGRGD 183
+V I+D+D+HHGNGT + FY+DP++ ++S H ++G+ YPG G ID+VG G
Sbjct: 272 KVLILDWDIHHGNGTQNMFYEDPNVLYISLHVYENGNFYPGQPDDPDLPDGGIDKVGTGA 331
Query: 184 GEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G G +N+ P G GD F ++++P AQ F PDL+++SAG+DA D L T
Sbjct: 332 GIGKNVNIGWPSQGMGDGEYMAAFQKIVMPIAQEFDPDLVIISAGFDAAAGDELGGCFVT 391
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
G Y +++ + L G + LEGGYNL ++S S + +GEP
Sbjct: 392 PGCY----SHMTHMLMSLAGGKVAVCLEGGYNLKAISRSALAVAKTLMGEP 438
>gi|428214186|ref|YP_007087330.1| deacetylase [Oscillatoria acuminata PCC 6304]
gi|428002567|gb|AFY83410.1| deacetylase, histone deacetylase/acetoin utilization protein
[Oscillatoria acuminata PCC 6304]
Length = 313
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 126/218 (57%), Gaps = 13/218 (5%)
Query: 65 TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAA 124
+++ +L A A + VD V + F L RPPGHHA MGFC+F N AIAA
Sbjct: 98 SYEVALLAVSAWLDGVDRVVETGEP-----AFVLARPPGHHAESNRGMGFCLFSNAAIAA 152
Query: 125 RYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDG 184
+A HGL+RV I+D+DVHHGNGT + +P I + S HQ YPGTG DE G D
Sbjct: 153 THALEKHGLQRVAILDWDVHHGNGTQEIVEKNPQIAYCSLHQYPCYPGTGAADETGPYD- 211
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+ LNLP+P GS + +F ++P F+PDL+LVSAGYDA+ DPLA +
Sbjct: 212 --NILNLPVPAGSTLAEYQVLFESKVMPFLNEFQPDLLLVSAGYDANAADPLARIDLQPE 269
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
Y +L QL + R VF LEGGY+L++LS SV
Sbjct: 270 DYGILTDYCLQLTR-----RIVFGLEGGYHLDALSKSV 302
>gi|313109188|ref|ZP_07795157.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
39016]
gi|386067862|ref|YP_005983166.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCGM2.S1]
gi|310881659|gb|EFQ40253.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
39016]
gi|348036421|dbj|BAK91781.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCGM2.S1]
Length = 380
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 162/301 (53%), Gaps = 27/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN--------------LNSLSYSVADSFRAF--LGEPSK 295
++ A+ G R V EGGY+ L+ + +V D R F L +P+
Sbjct: 292 MVRHAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA 351
Query: 296 A 296
A
Sbjct: 352 A 352
>gi|124383761|ref|YP_001029271.1| histone deacetylase [Burkholderia mallei NCTC 10229]
gi|254358181|ref|ZP_04974454.1| histone deacetylase family protein [Burkholderia mallei 2002721280]
gi|124291781|gb|ABN01050.1| histone deacetylase family protein [Burkholderia mallei NCTC 10229]
gi|148027308|gb|EDK85329.1| histone deacetylase family protein [Burkholderia mallei 2002721280]
Length = 367
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 3/180 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + PMGFC+ N+ IA A+ H ++RV +ID+DVHHGNGT +YD
Sbjct: 134 FSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHRVERVAVIDWDVHHGNGTQSIYYD 193
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP+ +S HQD + PG DE RG G G+ +N+PL G+GD A R F +++P
Sbjct: 194 DPNTLTISLHQDRCFPPGYSGADE--RGAGAGANVNVPLLAGAGDDAYRYAFERIVLPAL 251
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P+L++V++G DA+ +DPLA +Q + +Y + +KQ A+ CG R V EGGY+
Sbjct: 252 DAFRPELVIVASGLDANAVDPLARMQLHSDSYRYMTHALKQAAQRHCGGRLVIVHEGGYS 311
>gi|337270324|ref|YP_004614379.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
gi|336030634|gb|AEH90285.1| Histone deacetylase [Mesorhizobium opportunistum WSM2075]
Length = 373
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/257 (37%), Positives = 138/257 (53%), Gaps = 13/257 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATA-TTFQESLAAAGAGIA 78
P +V+D+ VH + +V + +R S +GP +F +L +AG A
Sbjct: 64 PVTVEDLLRVHTQRHVDDIRMLSERGSGF-------AGPQAPIGLNSFDIALLSAGTAYA 116
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
+ +V R D +AL RPPGHHA P MG C+F N+ ++ R Q L R I
Sbjct: 117 AMRAVL--TGRVDN--AYALARPPGHHAEPDQAMGNCLFSNIGVSVRRLQHEGLLGRAAI 172
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGS 197
+D+DVHHGNGT FY DP + +S HQD YP G G + + G+G GEG +N+PLP GS
Sbjct: 173 VDWDVHHGNGTETVFYSDPSVLTISLHQDNLYPTGRGALADNGKGAGEGYNINIPLPAGS 232
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G A F V+ P + FKPDL++V++G+DA DPL + + + LAA + LA
Sbjct: 233 GTGAYEASFDRVVAPALRAFKPDLVIVASGFDASGFDPLGRMMLNSECFRRLAARMVALA 292
Query: 258 KDLCGSRCVFFLEGGYN 274
+ R + EGGY+
Sbjct: 293 AETSDGRLMMTHEGGYS 309
>gi|220906209|ref|YP_002481520.1| histone deacetylase superfamily protein [Cyanothece sp. PCC 7425]
gi|219862820|gb|ACL43159.1| histone deacetylase superfamily [Cyanothece sp. PCC 7425]
Length = 306
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/289 (37%), Positives = 149/289 (51%), Gaps = 31/289 (10%)
Query: 10 SEIIELKNFSPASVDD----IASVHARAYVSGLEKAMDRASQQGIILIEGSGP----TYA 61
+E + ++ +P +V D I VH Y+ +++ D +G G T
Sbjct: 41 AEHLHWRSPTPITVRDPRPLIQQVHQLEYLQTVQRLAD----------QGGGALDPDTMV 90
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
+ +++ +L A A + VD V + F L RPPGHHA+ MGFC+FGN A
Sbjct: 91 SPDSYEVALLAVNAWLDGVDQVLTTAEP-----AFVLARPPGHHALRSRGMGFCLFGNAA 145
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
IAA YA R G+ RV I+D+DVHHGNGT P I + S HQ YP TG+ E G
Sbjct: 146 IAAHYALRQTGIHRVAILDWDVHHGNGTQALVESHPQIAYCSLHQAPYYPYTGEASERG- 204
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G + LNLPLP GS F +VP ++F PDL+++SAGYDA+ DPL+S+
Sbjct: 205 --GFDNVLNLPLPAGSSRQDYEPQFRHQVVPFLEQFSPDLLIISAGYDANRDDPLSSMAL 262
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
Y L + R VF LEGGY+LNSL++SVA + L
Sbjct: 263 LPEDYGFFTDCCLSLTR-----RVVFGLEGGYDLNSLAHSVAATLERCL 306
>gi|218889942|ref|YP_002438806.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
LESB58]
gi|254242464|ref|ZP_04935786.1| hypothetical protein PA2G_03214 [Pseudomonas aeruginosa 2192]
gi|416863844|ref|ZP_11915369.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
138244]
gi|421152414|ref|ZP_15611994.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 14886]
gi|126195842|gb|EAZ59905.1| hypothetical protein PA2G_03214 [Pseudomonas aeruginosa 2192]
gi|218770165|emb|CAW25927.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
LESB58]
gi|334835228|gb|EGM14119.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
138244]
gi|404525174|gb|EKA35450.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa ATCC 14886]
gi|453043547|gb|EME91277.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PA21_ST175]
Length = 380
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 149/263 (56%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGQADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
++ A+ G R V EGGY+
Sbjct: 292 MVRDAAERHAGGRLVVVHEGGYS 314
>gi|428776445|ref|YP_007168232.1| histone deacetylase superfamily protein [Halothece sp. PCC 7418]
gi|428690724|gb|AFZ44018.1| histone deacetylase superfamily [Halothece sp. PCC 7418]
Length = 344
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 152/279 (54%), Gaps = 15/279 (5%)
Query: 12 IIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLA 71
+++ + +P DI S + + S + + R + +G I+ P +A +++ +L
Sbjct: 77 VLDWQEPTPHQERDILSWVNKLHTSEYVQEVARLANEGGGRIDPDTPV--SADSYEIALL 134
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A A + VD V + + L RPPGHHA KG MGFC+F N AIAA YA
Sbjct: 135 AVSAWLDGVDQVLRTHHP-----SLVLARPPGHHAEKKGGMGFCLFSNCAIAAHYALTQP 189
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNL 191
+ RV I+D+DVHHGNGT D P + + S HQ YPGTGK +E G + + LNL
Sbjct: 190 PVNRVAILDWDVHHGNGTQSLVEDSPHLIYCSLHQSPCYPGTGKPEERGIYN---NVLNL 246
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P+ GS + + E ++P ++F+PDL+LVSAGYDA+ DPLA + + TY L
Sbjct: 247 PILPGSTWNEYQPLIEEQVIPFIRQFEPDLLLVSAGYDANAADPLAEVALSPETYQTLTE 306
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L R +F LEGGY+L++++ SV + RA +
Sbjct: 307 TCLSLTP-----RVLFGLEGGYDLDAVAQSVVATVRACI 340
>gi|433680061|ref|ZP_20511709.1| Histone deacetylase 1 Short=HD1 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430814814|emb|CCP42349.1| Histone deacetylase 1 [Xanthomonas translucens pv. translucens DSM
18974]
Length = 301
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 119/195 (61%), Gaps = 7/195 (3%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA MGFC+F N+A+AA +A+ HGL+R+ I+DFDVHHGNGT F
Sbjct: 111 FCAVRPPGHHATATTAMGFCLFNNIAVAAAHARDTHGLERIAIVDFDVHHGNGTQAIFER 170
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + +LSTHQ G +P +G I + G G+ N LP GSG R + + ++P
Sbjct: 171 DPRVQYLSTHQSGLFPNSGGIHD----RGVGNLHNALLPPGSGGFRFRNTWADQMLPLLD 226
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
FKP L+L+SAG+DAH+ DPLA L T + L A ++ LA+ R + LEGGY+L
Sbjct: 227 AFKPQLLLISAGFDAHMRDPLADLMLETEDFAWLTAELRALAQRHARGRVISLLEGGYDL 286
Query: 276 NSL---SYSVADSFR 287
+L S + D+ R
Sbjct: 287 QALRECSVAHVDALR 301
>gi|448627024|ref|ZP_21671699.1| acetoin utilization protein [Haloarcula vallismortis ATCC 29715]
gi|445759652|gb|EMA10928.1| acetoin utilization protein [Haloarcula vallismortis ATCC 29715]
Length = 335
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 143/279 (51%), Gaps = 10/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E A +D + VH Y+S + D T A T+ +LA+
Sbjct: 38 VEYVAADDADIDLVREVHDTDYISEFREFCDDGGGNW------DADTVAVEETWDAALAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + ++ + D P F+L RPPGHHA+ MGFC N A+AA+ A
Sbjct: 92 AGLAVWAAEAALDGNSGRDTP--FSLGRPPGHHAVGDDAMGFCFINNAAVAAQAALETDA 149
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG I E G GD +G+ LN+
Sbjct: 150 -DRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHEDGLYPGTGDISETGTGDADGTNLNVK 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G+ E I P + + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 209 YKPGADTVDYLAAIDECIAPAIEDYDPDLLLISAGFDAHEHDPISRMRVSTEGYGAMTDR 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++ L D C + LEGGY L++LS SV F G
Sbjct: 269 MRSL-TDACDAALGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|299471183|emb|CBN79039.1| histone deacetylase superfamily protein [Ectocarpus siliculosus]
Length = 365
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 114/187 (60%), Gaps = 4/187 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA P MGFC F N I A +A+ AHG++RV ++D DVHHGNGT F +
Sbjct: 9 FCCVRPPGHHAEPDRAMGFCFFNNAPIGALHAKAAHGIERVAVVDIDVHHGNGTQALFEE 68
Query: 156 DPDIFFLSTHQDGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP F+ STHQ YPGTG D G + + +N+ + G G RT + E I+P
Sbjct: 69 DPTTFYASTHQGPEFYPGTGFDDITGV---QSNIVNVSMGDGEGSGGFRTAYTEKILPAL 125
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F+P LI++SAG+DAHV DPLA + Y + I +A+ +CG R V LEGGYN
Sbjct: 126 EGFRPGLIVISAGFDAHVDDPLAGITLDEDDYRWVTERICDVAERVCGGRVVSILEGGYN 185
Query: 275 LNSLSYS 281
L ++S S
Sbjct: 186 LQAISDS 192
>gi|115473213|ref|NP_001060205.1| Os07g0602200 [Oryza sativa Japonica Group]
gi|113611741|dbj|BAF22119.1| Os07g0602200 [Oryza sativa Japonica Group]
gi|222637409|gb|EEE67541.1| hypothetical protein OsJ_25020 [Oryza sativa Japonica Group]
Length = 695
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 26 IASVHARAYVSGLEKAMDRA--SQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
IASVH++ ++ + + S++ I + + Y + + + AAG+ I + + V
Sbjct: 68 IASVHSQNHIKLMRSISSKEYDSRRNKIARKFNS-IYFNKGSSESAFLAAGSVIEVAEKV 126
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH---GLKRVFIID 140
AA + AL+RPPGHHA MGFC+F NVAIAA Y G+K++ I+D
Sbjct: 127 AAGELSS----AIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVD 182
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDE--VGRGDGEGSTLNLPLP- 194
+DVHHGNGT FY DP + F S H+ GS YP G +G GDG+G +N+P
Sbjct: 183 WDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEH 242
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD + V++P A+ F PD++LVSAG+DA + DPL T Y +L +
Sbjct: 243 GKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLL 302
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
A+ R V LEGGYNL S++ SV+ + LG+ + FD P + E S +V
Sbjct: 303 GFAQ----GRIVMALEGGYNLRSIANSVSACAKVLLGDKFR---FDTPDMQPFESSWRVI 355
Query: 315 QAI 317
QA+
Sbjct: 356 QAV 358
>gi|189237454|ref|XP_967425.2| PREDICTED: similar to histone deacetylase [Tribolium castaneum]
Length = 807
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/276 (38%), Positives = 149/276 (53%), Gaps = 20/276 (7%)
Query: 62 TATTFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
T TT+ E A A +A+ +V A D GFA++RPPGHHA P+ MGFC F +
Sbjct: 477 TDTTWNEVYTAPAARMAVGCTVDLAVRTWTGDIRNGFAVVRPPGHHAEPQQAMGFCFFNS 536
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKI 176
VAIAAR QR H + ++ I D+ VHHGNGT D FYDDP + +S H+ DG+ +PGTG
Sbjct: 537 VAIAARVLQREHRVHKILIFDWGVHHGNGTQDIFYDDPRVLVISMHRHDDGNFFPGTGSP 596
Query: 177 DEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAH- 231
E G G G G +N+ GG D F +++P A+ F PD++LVSAG+DA
Sbjct: 597 GECGAGAGVGFNVNIAWSGGLNPPLADADYLAAFRAIVMPIAREFNPDIVLVSAGFDATD 656
Query: 232 -VLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
L PL + + + + + QLA+ R V LEGGY+L S+ S + R L
Sbjct: 657 GHLPPLGGYKVSAACFGHMTRQLMQLAR----GRVVLALEGGYDLPSICDSAEECVRVLL 712
Query: 291 GE-PSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
G+ PS + P+ L P A+++V + S
Sbjct: 713 GDSPSPIA----PSELARAPCGNAVLALQKVISVQS 744
>gi|15598969|ref|NP_252463.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa PAO1]
gi|386057232|ref|YP_005973754.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
M18]
gi|392982500|ref|YP_006481087.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa DK2]
gi|418585988|ref|ZP_13150034.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589865|ref|ZP_13153784.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P2]
gi|419757127|ref|ZP_14283472.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa PADK2_CF510]
gi|421518318|ref|ZP_15964992.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAO579]
gi|424939360|ref|ZP_18355123.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCMG1179]
gi|9949945|gb|AAG07161.1|AE004796_6 probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAO1]
gi|346055806|dbj|GAA15689.1| probable acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
NCMG1179]
gi|347303538|gb|AEO73652.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
M18]
gi|375043662|gb|EHS36278.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051401|gb|EHS43870.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa MPAO1/P2]
gi|384396882|gb|EIE43300.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318005|gb|AFM63385.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa DK2]
gi|404347800|gb|EJZ74149.1| putative acetylpolyamine aminohydrolase [Pseudomonas aeruginosa
PAO579]
Length = 380
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 149/263 (56%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
++ A+ G R V EGGY+
Sbjct: 292 MVRDAAERHAGGRLVVVHEGGYS 314
>gi|83768243|dbj|BAE58382.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 691
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 156/316 (49%), Gaps = 26/316 (8%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
P S + S + + L D + I L Y TF SL + G I
Sbjct: 98 PESSRPLVSRPMKRISTSLTDLTDMTDDELIALEHTRDSIYFNKLTFASSLLSVGGAIET 157
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVF 137
+VA K + A+IRPPGHHA MGFC+F NV++AAR Q+ G +++
Sbjct: 158 CLAVATRKVKN----AIAVIRPPGHHAEHDKTMGFCLFNNVSVAARVCQKQLGDKCRKIL 213
Query: 138 IIDFDVHHGN-GTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNL 191
I+D+DVHHG TN+AFYDDP++ ++S H QDG YPG G D G G G G +N+
Sbjct: 214 ILDWDVHHGKTSTNNAFYDDPNVLYISLHVYQDGKFYPGGDEGDWDHCGTGAGYGRNVNI 273
Query: 192 PLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P P G GD F +V++P AQ F PDL++V++G+DA V D L F T T Y
Sbjct: 274 PWPSQGMGDGDYMYAFQQVVMPIAQEFDPDLVIVASGFDAAVGDELGGC-FVTPTCY--- 329
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE-P 309
A++ + L + LEGGYN S+S S + +G+P P L+ P
Sbjct: 330 AHMTHMLMTLANGKVAVCLEGGYNFRSISKSALAVTKTLMGDP--------PDRLHSTFP 381
Query: 310 SAKVKQAIERVKHIHS 325
S + RV I S
Sbjct: 382 SKLATTTVRRVMMIQS 397
>gi|354485959|ref|XP_003505149.1| PREDICTED: histone deacetylase 6-like [Cricetulus griseus]
Length = 1135
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 153/283 (54%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV + +++ + EG+ Y +TF + A GA
Sbjct: 529 PAMDAELLACHSAEYVDRVRATEKMKTRE--LHREGANFDSIYICPSTFACAQLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 CLVEAVLSGQVLN----GIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQAIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHMFEDDPSVLYVSVHRYDHGTFFPMGDEGASSQVGRAAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD T +H +++P A F P+L+LVSAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLANGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ SVH+ Y+ +E + IL + Y ++ + A G+ + LV
Sbjct: 135 AEKEELMSVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 195 DAVLGAEIRN----GMAVIRPPGHHAQHSLMDGYCMFNHVAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYP--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H Q +P G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 310
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 VGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L G + + LEGGYNL++L+ V+ S LG+P E
Sbjct: 367 HFLMGLAGGKVILSLEGGYNLHALAKGVSASLHTLLGDPCPMLE 410
>gi|355639775|ref|ZP_09051361.1| hypothetical protein HMPREF1030_00447 [Pseudomonas sp. 2_1_26]
gi|354831710|gb|EHF15718.1| hypothetical protein HMPREF1030_00447 [Pseudomonas sp. 2_1_26]
Length = 380
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/301 (33%), Positives = 162/301 (53%), Gaps = 27/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLAGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN--------------LNSLSYSVADSFRAF--LGEPSK 295
++ A+ G R V EGGY+ L+ + +V D R F L +P+
Sbjct: 292 MVRDAAERHAGGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA 351
Query: 296 A 296
A
Sbjct: 352 A 352
>gi|325922422|ref|ZP_08184191.1| deacetylase, histone deacetylase/acetoin utilization protein
[Xanthomonas gardneri ATCC 19865]
gi|325547119|gb|EGD18204.1| deacetylase, histone deacetylase/acetoin utilization protein
[Xanthomonas gardneri ATCC 19865]
Length = 302
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/187 (45%), Positives = 115/187 (61%), Gaps = 4/187 (2%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ I+DFDVHHGNGT F
Sbjct: 111 AFCAVRPPGHHATGQVSMGFCLFNNIALAAAHARDRHGLERITIVDFDVHHGNGTQAIFE 170
Query: 155 DDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 171 RDPTVQYLSTHQSGLYPHSGSVYE----RGIGNIHNLLLPPGSDGLRFRNVWEDEMLPLI 226
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P LIL+SAG+DAH+ DPLA L + L ++ LA+ R V LEGGY+
Sbjct: 227 DAFRPQLILISAGFDAHLRDPLADLMLDADDFAWLTRALRTLAERHARGRVVSMLEGGYD 286
Query: 275 LNSLSYS 281
L +L S
Sbjct: 287 LQALRES 293
>gi|357605690|gb|EHJ64741.1| putative histone deacetylase hda2 [Danaus plexippus]
Length = 1092
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 155/279 (55%), Gaps = 15/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D+I +VH Y+ L++ + + Y + Q + AAAGA I +V
Sbjct: 544 AADDEILAVHTEKYLDSLKELSSTKLRDLNAQRKSFDSVYFHPDSLQSAAAAAGAVIQMV 603
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + G ++RPPGHHA P GFC+ NVA+ AR+A+ AHGL R+ I+D
Sbjct: 604 DAVLRHGSG-----GVCVVRPPGHHADEDVPSGFCLLNNVAVGARHARAAHGLTRIMILD 658
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDE--VGRGDGEGSTLNLPL-P 194
+DVHHGNGT Y+D +I ++S H+ +GS +P + D VG+G GEG +N+P
Sbjct: 659 WDVHHGNGTQRITYEDKEILYISIHRYDNGSFFPNSPAADHTAVGQGRGEGYNINIPWNK 718
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD + V++P A + P L+LVSAG+DA V DPL + T Y +
Sbjct: 719 RGMGDAEYLSAMCSVVLPVAYEYGPQLVLVSAGFDAAVGDPLGGCKVTPECY----GRMT 774
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ + L G R + LEGGYN+ S+SY++ +A LG+P
Sbjct: 775 HMLRGLAGGRVIVCLEGGYNVTSISYAMTMCTKALLGDP 813
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 168/342 (49%), Gaps = 45/342 (13%)
Query: 12 IIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGII-LIEGSGPTYATATTFQE 68
I + K + P A+ +++ +H+ + S +E + + L G Y TT +
Sbjct: 86 IEQCKVYPPRSATREEVLELHSPSVYSMMEGTHQNQDLEYLEELSAGFDAVYIHPTTHEL 145
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L++AG + +V+ + + + + ++RPPGHHA+ P G+C++ N A+AA A
Sbjct: 146 ALSSAGCTLDMVERLVSDELQN----AACMVRPPGHHAMRAEPCGYCIYNNAALAANRAL 201
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKID--EVGRGD 183
+ GL+R+ I+D+DVHHG T FYDDP + + S H+ +P + D +G G
Sbjct: 202 KL-GLQRILIVDWDVHHGQATQQMFYDDPRVVYFSIHRYEHGAFWPNLRQSDFPYIGSGQ 260
Query: 184 GEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS---- 238
GEG N+PL G D ++H++++P A ++P L+LVSAGYDA V P S
Sbjct: 261 GEGHNFNVPLNNTGMTDADYIAIWHQLLLPMAFEYQPQLVLVSAGYDAAVGCPEFSPELI 320
Query: 239 ----------------LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
++ T Y A++ + + +C SR + LEGGY L SL+
Sbjct: 321 IVSAGYDAALGDEKGEMEVTPACY----ASLLHMLQGVC-SRVLVLLEGGYCLRSLAEGA 375
Query: 283 ADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
A + R LG A P + +EP ++ +I + H
Sbjct: 376 ALTLRTLLGHAPPAL----PPL--QEPCESIRDSILNCIYSH 411
>gi|260942271|ref|XP_002615434.1| hypothetical protein CLUG_04316 [Clavispora lusitaniae ATCC 42720]
gi|238850724|gb|EEQ40188.1| hypothetical protein CLUG_04316 [Clavispora lusitaniae ATCC 42720]
Length = 534
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 147/283 (51%), Gaps = 20/283 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH ++ + D Q + E Y +F + + G I
Sbjct: 208 ATAEEILQVHTEKHLQFIAATEDMTRAQLLDETEKGDSIYVNNDSFLSAKLSCGGAIEAC 267
Query: 81 DSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRV 136
+V KN A++RPPGHHA P P GFC+F NVA+AA+ RA+ ++R+
Sbjct: 268 KAVVEGHVKN------AMAIVRPPGHHAEPDAPGGFCLFSNVAVAAKNMLRAYPESVRRI 321
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNL 191
I+D+D+HHGNGT AFYDDP + ++S H ++G YPGT G D+ G G G G +LN+
Sbjct: 322 AIVDWDIHHGNGTQRAFYDDPRVLYVSLHRYENGRFYPGTKFGGADQTGSGKGAGFSLNI 381
Query: 192 PLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P P G GD F V++P F PDL++VSAG+DA D + T Y +
Sbjct: 382 PWPSAGVGDADYVYAFRRVVLPVLCEFDPDLVIVSAGFDAAAGDLIGQCHVTPAGYGHMT 441
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+K +A+ + LEGGYNL S+S S + +GEP
Sbjct: 442 HMLKGVAR----GKLAVVLEGGYNLESISASAVGVAKVLVGEP 480
>gi|163852410|ref|YP_001640453.1| histone deacetylase superfamily protein [Methylobacterium
extorquens PA1]
gi|163664015|gb|ABY31382.1| histone deacetylase superfamily [Methylobacterium extorquens PA1]
Length = 328
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/272 (38%), Positives = 147/272 (54%), Gaps = 14/272 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
ASV ++ VH +YV + A + +G I+G T + + L A G V
Sbjct: 71 ASVAEL--VHPASYVETIVAA---SPDEGFFQIDGD--TLMSPGSLNTCLHAIGGSNHAV 123
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V + + F +RPPGHHA MGFC+F + AIA R+AQ+A G RV ++D
Sbjct: 124 DAVM----KGECANAFVAMRPPGHHAERDRAMGFCLFNHAAIAVRHAQKAFGATRVALVD 179
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNG+ D F+ D + + STHQ +PG+G E RGD + + +N PL G
Sbjct: 180 FDVHHGNGSQDIFWADKTVMYASTHQMPLFPGSGATGE--RGDHD-TIVNAPLKAFDGSE 236
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R F I+P F PDLI++SAG+DAH LDPLA++Q + + ++A
Sbjct: 237 LFREAFEARILPRLDAFAPDLIVISAGFDAHKLDPLANIQLDEADFGWATRRLMEVADRH 296
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
G R V LEGGY+L+ L+ SVA A +G
Sbjct: 297 AGGRVVSILEGGYSLDGLARSVAAHMDALMGR 328
>gi|163744708|ref|ZP_02152068.1| histone deacetylase family protein [Oceanibulbus indolifex HEL-45]
gi|161381526|gb|EDQ05935.1| histone deacetylase family protein [Oceanibulbus indolifex HEL-45]
Length = 369
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/275 (37%), Positives = 152/275 (55%), Gaps = 14/275 (5%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTY 60
ME+T F ++ ++ +PA + +A VH Y+ ++ D + + + Y
Sbjct: 52 MEVTGLF---AELDTRSAAPAGREALARVHPETYLDEFKRLSDAGGGEMGHAVPFARGGY 108
Query: 61 ATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
AT +AG I V +VA R D +AL RPPGHH +P P GFC+ N+
Sbjct: 109 ELATL------SAGLAIEAVGAVA----RGDLDNAYALSRPPGHHCLPDLPNGFCLLANI 158
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEV 179
AIA A+ KRV ++D+DVHHGNGT +YD D+ +S HQ+G+YP TG + +
Sbjct: 159 AIAIEAARAKGLAKRVVVLDWDVHHGNGTEAIYYDRDDVLTISLHQEGNYPTDTGSVADR 218
Query: 180 GRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
GRG GEG +NLP+ GSG TA V++P + F PD+I+V+ GYDA ++DPLA +
Sbjct: 219 GRGAGEGYNINLPMHAGSGHTAYLHAMDRVVIPAIEAFGPDMIIVACGYDAAIVDPLARM 278
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
Q T T+ + I+ A +CG + V EGGY+
Sbjct: 279 QATAATFAEMTKRIRDTADKVCGGKLVLVHEGGYS 313
>gi|344250000|gb|EGW06104.1| Histone deacetylase 6 [Cricetulus griseus]
Length = 666
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 153/283 (54%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV + +++ + EG+ Y +TF + A GA
Sbjct: 60 PAMDAELLACHSAEYVDRVRATEKMKTRE--LHREGANFDSIYICPSTFACAQLATGAAC 117
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 118 CLVEAVLSGQVLN----GIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQAIAGRALRI 173
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 174 LIVDWDVHHGNGTQHMFEDDPSVLYVSVHRYDHGTFFPMGDEGASSQVGRAAGIGFTVNV 233
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD T +H +++P A F P+L+LVSAG+DA DPL Q T Y
Sbjct: 234 PWNGPRMGDADYLTAWHRLVLPIAYEFNPELVLVSAGFDAAQGDPLGGCQVTPEGY---- 289
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L R + LEGGYNL S+S S+A + LG+P
Sbjct: 290 AHLTHLLMGLANGRIILILEGGYNLASISESMAACTHSLLGDP 332
>gi|156361230|ref|XP_001625421.1| predicted protein [Nematostella vectensis]
gi|156212255|gb|EDO33321.1| predicted protein [Nematostella vectensis]
Length = 369
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 160/312 (51%), Gaps = 18/312 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +D+ +H++ ++ ++ D + L E Y + + +L + G +A V
Sbjct: 60 ATEEDLLCLHSKEHIDKMKSTQDMKPRDLFNLGEEYDSIYMSKDVYDCALLSCGCTLAAV 119
Query: 81 DSVAASKNRPDPPLGFAL--IRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
+ VA +K+ L +RPPGHHA MG+C F NVAIAA+ AQ+ G++R+ I
Sbjct: 120 EHVATNKSSKHSIHINQLFFLRPPGHHADADSAMGYCFFNNVAIAAKLAQQRWGMQRILI 179
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGK--IDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT + F DP + + S H+ YP + + D VG+G G+G +N+P
Sbjct: 180 VDWDIHHGNGTQNLFESDPSVLYFSLHRYDHANFYPFSAQANYDIVGKGQGKGFNVNVPW 239
Query: 194 PGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
GD F ++++P A F PD++LVSAG+D+ DP T Y L
Sbjct: 240 NKSHIGDADYIAAFQQILLPIAYEFDPDIVLVSAGFDSARGDPKGYCDITPEGYCHLTNM 299
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ LA G + V LEGGYN+ S++ S+ LG+P D P + P
Sbjct: 300 LMSLA----GGKVVVILEGGYNITSVAESMCSCTSTLLGDP--CPRLDGPMV----PCQS 349
Query: 313 VKQAIERVKHIH 324
V ++I V ++H
Sbjct: 350 VLKSISNVVNVH 361
>gi|349700851|ref|ZP_08902480.1| putative acetylpolyamine aminohydrolase [Gluconacetobacter
europaeus LMG 18494]
Length = 371
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+AL RPPGHH +P MGFC N+ +A A+R H L RV ++D+DVHHGNGT FYD
Sbjct: 134 YALSRPPGHHCLPDEGMGFCFLANIPVAIEEARRVHKLSRVAVVDWDVHHGNGTEAIFYD 193
Query: 156 DPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
PD+ +S HQ+ YP G+G D G G GEG +N+PL G G A +++VP
Sbjct: 194 RPDVLTISIHQENCYPTGSGHPDRRGDGAGEGYNINIPLLPGGGHDAYVGAMEKIVVPAL 253
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ ++P+LI+V+ GYDA+ DPLA + + TY L + + +A ++CG + V EGGY+
Sbjct: 254 KAYQPELIIVACGYDANAFDPLARMMLPSQTYRYLISRVMDVAGEVCGGKVVAAHEGGYS 313
>gi|338980033|ref|ZP_08631352.1| Histone deacetylase superfamily protein [Acidiphilium sp. PM]
gi|338209056|gb|EGO96856.1| Histone deacetylase superfamily protein [Acidiphilium sp. PM]
Length = 309
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 152/277 (54%), Gaps = 13/277 (4%)
Query: 15 LKNFSPASVDD-IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAA 73
L+ +P + + + +VH AYV + AM A + + L T + + +L +A
Sbjct: 43 LREVAPEAPESALRAVHHDAYVDSI-LAMAPAEGEPVHL---DADTLMSHGSLAAALRSA 98
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
G + VD+V R F RPPGHHA P MGFC+F N AIAA +A+ L
Sbjct: 99 GGAMRAVDAVMEGWAR----AAFVATRPPGHHAEPNRAMGFCLFANAAIAAHHARAH-DL 153
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL 193
KRV ++DFDVHHGNGT F D D+F+ S+HQ YPGTG+ E G G+ +N L
Sbjct: 154 KRVAVVDFDVHHGNGTQAMFETDADLFYASSHQYPCYPGTGRPSERGVA---GNIVNAAL 210
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
P GSG R + + ++P +RF P+L+++SAG+DAH DPLA L T + L +
Sbjct: 211 PPGSGSAEFRAAWQDTLIPALERFAPELLIISAGFDAHRFDPLAELNVETADFAWLTEAL 270
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
++A CG + V LEGGY+L +L+ A RA +
Sbjct: 271 VRVADRHCGGKVVSLLEGGYDLEALAAGTAAHVRALM 307
>gi|363750828|ref|XP_003645631.1| hypothetical protein Ecym_3324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889265|gb|AET38814.1| Hypothetical protein Ecym_3324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 706
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/308 (32%), Positives = 163/308 (52%), Gaps = 21/308 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D+I VH++ +V L+ + +Q + E Y + + + G I
Sbjct: 124 ATEDEILLVHSKEHVEFLKTTNTMSREQLLKETEAGDSVYYNNDSLVSAKLSCGGAIEAC 183
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AAR + + +++V I
Sbjct: 184 KAVVEGRVKN----ALAVVRPPGHHAEPEVAGGFCLFSNVAVAARNILKNYPESVRKVMI 239
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+D + ++S H+ YPGT G ++ G G GEG N+P
Sbjct: 240 LDWDIHHGNGTQRAFYNDNRVLYVSLHRYELGRYYPGTEYGNYNQSGEGKGEGFNCNIPW 299
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
GG GD F ++++P + F+PDL+++S+G+DA D + + Y +
Sbjct: 300 SCGGVGDAEYMWAFEQIVIPMGREFQPDLVIISSGFDAADGDTIGQCHVSPACYGHMTHM 359
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LAK G+ CV LEGGYNL+S++ S + +GEP E +P +++P +
Sbjct: 360 LKSLAK---GNMCV-VLEGGYNLDSIAKSALGVVKVLIGEP--PDELPDP---FKQPKPE 410
Query: 313 VKQAIERV 320
IE V
Sbjct: 411 AIATIETV 418
>gi|451845968|gb|EMD59279.1| hypothetical protein COCSADRAFT_41143 [Cochliobolus sativus ND90Pr]
Length = 842
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 155/313 (49%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I +H + +E + S + E Y +T++ + AAG I
Sbjct: 182 ATRPEILLIHTEEHYDLVESFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEAC 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V R A+IRPPGHHA P GFC+F NV IAAR Q A+ ++V I
Sbjct: 242 KAVVQGAVRN----AIAIIRPPGHHAESDQPSGFCIFNNVPIAARVCQNAYPETCRKVLI 297
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H +DG+ YP G +D G G GEG +N+P
Sbjct: 298 LDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKNVNIPW 357
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G GD+ F +V++P A F PDL+++SAG+DA D L T Y +
Sbjct: 358 AEHGMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHM 417
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ LAK + V LEGGYNL S++ S + + EP D PA P
Sbjct: 418 LMSLAK----GKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPA-----PKDS 468
Query: 313 VKQAIERVKHIHS 325
+E VK HS
Sbjct: 469 AVYIVENVKRQHS 481
>gi|34394912|dbj|BAC84464.1| putative histone deacetylase [Oryza sativa Japonica Group]
Length = 665
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 26 IASVHARAYVSGLEKAMDRA--SQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSV 83
IASVH++ ++ + + S++ I + + Y + + + AAG+ I + + V
Sbjct: 68 IASVHSQNHIKLMRSISSKEYDSRRNKIARKFNS-IYFNKGSSESAFLAAGSVIEVAEKV 126
Query: 84 AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH---GLKRVFIID 140
AA + AL+RPPGHHA MGFC+F NVAIAA Y G+K++ I+D
Sbjct: 127 AAGELSS----AIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTDLGIKKILIVD 182
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDE--VGRGDGEGSTLNLPLP- 194
+DVHHGNGT FY DP + F S H+ GS YP G +G GDG+G +N+P
Sbjct: 183 WDVHHGNGTQKMFYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEH 242
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G GD + V++P A+ F PD++LVSAG+DA + DPL T Y +L +
Sbjct: 243 GKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCITPNGYALLLTKLL 302
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
A+ R V LEGGYNL S++ SV+ + LG+ + FD P + E S +V
Sbjct: 303 GFAQ----GRIVMALEGGYNLRSIANSVSACAKVLLGDKFR---FDTPDMQPFESSWRVI 355
Query: 315 QAI 317
QA+
Sbjct: 356 QAL 358
>gi|401837792|gb|EJT41666.1| HDA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 706
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 163/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + +Q + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREQLLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + + Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVSPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP D +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEPP-----DELPDSLSDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEMIDKVIRLQS 425
>gi|333978771|ref|YP_004516716.1| histone deacetylase superfamily protein [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333822252|gb|AEG14915.1| histone deacetylase superfamily [Desulfotomaculum kuznetsovii DSM
6115]
Length = 456
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 146/262 (55%), Gaps = 21/262 (8%)
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHA--IPKGPMGFCVFGNVAIAARYA 127
L AAG+ L D++ + + GFAL+RPPGHHA + G GFC N AI Y
Sbjct: 79 LIAAGSATLLADAIVHGELKN----GFALVRPPGHHAMRVVHGNRGFCNINNEAILVEYL 134
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGE 185
+R HG+KR+ I+D DVHHG+GT D FY DPD+ F+S HQDG YPGTG +E+G
Sbjct: 135 RRHHGIKRIAIVDSDVHHGDGTQDIFYHDPDVLFISFHQDGRTIYPGTGFPNELGGPGAY 194
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
T+N+PLP G GD V +I+P + FKP+ I+ SAG D H DPL S++FT
Sbjct: 195 ARTINIPLPPGLGDETFHYVVDNLILPILEDFKPEFIINSAGQDNHFTDPLGSMRFTARG 254
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNS-LSYSVADSFRAFLG-EPSKASEFDNPA 303
Y A ++L L LEGGY + + L Y A G + S E + P
Sbjct: 255 Y---AEFTRKLNPHLA------VLEGGYAIETALPYVNLAILLALAGHDYSYVREPEWPG 305
Query: 304 ILYEEPS--AKVKQAIERVKHI 323
+ E P A+V++ +E+++++
Sbjct: 306 TMPENPERVARVQRVVEQLRNV 327
>gi|410082597|ref|XP_003958877.1| hypothetical protein KAFR_0H03320 [Kazachstania africana CBS 2517]
gi|372465466|emb|CCF59742.1| hypothetical protein KAFR_0H03320 [Kazachstania africana CBS 2517]
Length = 702
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 161/313 (51%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ D+I VH+R ++ LE + + E Y ++ + + G I
Sbjct: 118 ATADEILEVHSREHLEFLESTTTMNREVLLKETEKGDSVYFNNDSYMSAKLSCGGAIEAC 177
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V K + A++RPPGHH+ P+ GFC+F NVA+AA+ + + ++++ I
Sbjct: 178 KAVVEGKVKN----ALAVVRPPGHHSEPESSGGFCLFSNVAVAAKNILKNYPESVRKIMI 233
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 234 LDWDIHHGNGTQKAFYQDERVLYVSLHRFEAGKYYPGTVQGQYDQCGEGKGEGFNCNITW 293
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F ++++P + F+PDL+++S+G+DA D + T Y +
Sbjct: 294 PTGGVGDAEYMWAFEQIVMPMGREFQPDLVIISSGFDAADGDVIGQCHVTPSCYGHMTHM 353
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ V LEGGYNL+S++ S + +GEP E +P ++P +
Sbjct: 354 LKSLAR----GNLVVVLEGGYNLDSIAISALSVAKTLIGEP--PDELPDPL---KDPKPE 404
Query: 313 VKQAIERVKHIHS 325
+ I +V I S
Sbjct: 405 ALEMIYKVIKIQS 417
>gi|448735068|ref|ZP_21717286.1| HdaI-type histone deacetylase [Halococcus salifodinae DSM 8989]
gi|445798937|gb|EMA49322.1| HdaI-type histone deacetylase [Halococcus salifodinae DSM 8989]
Length = 337
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 144/253 (56%), Gaps = 7/253 (2%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T A T+ +L +AG + ++ + + P FAL RPPGHHA+ MGFC
Sbjct: 78 TVAVEATWDAALRSAGQAVWAAEAALDGASERETP--FALGRPPGHHAVADDAMGFCFLN 135
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAA +RV IID+DVHHGNGT D F D D+F+ S H+ G YPGTG+ E
Sbjct: 136 NAAIAAEAMIDDGRAERVAIIDWDVHHGNGTQDIFEDRGDVFYASIHERGLYPGTGEAGE 195
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLAS 238
+G GDGEG+T NL P G+GD A EV+ P F PDL+LVSAG+DAH DP++
Sbjct: 196 IGTGDGEGTTANLAFPSGAGDPAYVAAVDEVLAPLLDDFDPDLLLVSAGFDAHEHDPISR 255
Query: 239 LQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG----EPS 294
+ +T Y +LAA ++ LA + F LEGGY L++LS S+ F G EP
Sbjct: 256 MSVSTEGYGVLAARLRDLAA-RSDAGFGFVLEGGYGLDTLSESITTVNEVFGGYDPVEPE 314
Query: 295 KASEFDNPAILYE 307
+++ A++ E
Sbjct: 315 GSADDRARAVIDE 327
>gi|240139746|ref|YP_002964223.1| histone deacetylase family protein [Methylobacterium extorquens
AM1]
gi|418059348|ref|ZP_12697299.1| histone deacetylase superfamily [Methylobacterium extorquens DSM
13060]
gi|240009720|gb|ACS40946.1| Histone deacetylase family protein [Methylobacterium extorquens
AM1]
gi|373567096|gb|EHP93074.1| histone deacetylase superfamily [Methylobacterium extorquens DSM
13060]
Length = 283
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH +YV + A + +G I+G T + + L A G VD+V
Sbjct: 32 VHPASYVETIVAA---SPDEGFFQIDGD--TLMSPGSLNTCLHAIGGSNHAVDAVM---- 82
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ + F +RPPGHHA MGFC+F + AIA R+AQ+A G RV ++DFDVHHGNG
Sbjct: 83 KGECANAFVAMRPPGHHAERDRAMGFCLFNHAAIAVRHAQKAFGATRVALVDFDVHHGNG 142
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
+ D F+ D + + STHQ +PG+G E RGD + + +N PL G R F
Sbjct: 143 SQDIFWADKTVMYASTHQMPLFPGSGATGE--RGDHD-TIVNAPLKAFDGSELFREAFEA 199
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
I+P F PDLI++SAG+DAH LDPLA++Q + + ++A G R V
Sbjct: 200 RILPRLDAFAPDLIVISAGFDAHKLDPLANIQLDEADFGWATRRLMEVADRHAGGRVVSI 259
Query: 269 LEGGYNLNSLSYSVADSFRAFLGE 292
LEGGY+L+ L+ SVA A +G
Sbjct: 260 LEGGYSLDGLARSVAAHMDALMGR 283
>gi|134284080|ref|ZP_01770774.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
gi|134244532|gb|EBA44636.1| histone deacetylase family protein [Burkholderia pseudomallei 305]
Length = 370
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 129/215 (60%), Gaps = 4/215 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+ALIRP GHHA MG+C + NVAIAAR+AQ AHG++RV I+D+DVHHGNGT AFYD
Sbjct: 133 YALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQQAFYD 192
Query: 156 DPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP + F+S H+ ++P G+ E G G G G +N+PLP G+GD R F E+++P
Sbjct: 193 DPSVLFVSLHEAANFPVDGGEARETGGGAGAGYNVNVPLPSGTGDAGYRHAFDELVLPLV 252
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F P LILVSAG DA+ DPL ++ + +A ++Q A CG R V EGGY+
Sbjct: 253 EAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGRIVMLQEGGYS 312
Query: 275 LNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
L L + +G + FD+P + P
Sbjct: 313 LPYLPIATLGVLEGLVG---WNAPFDDPHQFVQYP 344
>gi|401885828|gb|EJT49913.1| histone deacetylase clr3 [Trichosporon asahii var. asahii CBS 2479]
Length = 709
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 137/237 (57%), Gaps = 19/237 (8%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FA++RPPGHHA P MGFC F NVA+AAR Q+ K+V I+D+DVHHGNGT AF++
Sbjct: 189 FAIVRPPGHHAEPDEHMGFCFFNNVAVAAREMQKEGLAKKVLILDWDVHHGNGTQRAFWN 248
Query: 156 DPDIFFLSTHQ-DGS--YPGT--GKIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEV 209
DP++ ++S H+ DG YP + G +D VG G GEG ++N+P P GG GD F ++
Sbjct: 249 DPNVLYISLHRHDGGKFYPSSDFGALDMVGEGPGEGKSVNIPWPSGGFGDGDYIYAFQKI 308
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
++P A F+PDL+++S+G+DA D L T Y ++ + L G R V L
Sbjct: 309 VMPIAYEFEPDLVIISSGFDAADGDHLGQCHVTPAGY----GHMTHMLSALAGGRLVVAL 364
Query: 270 EGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL-YEEPSAKVKQAIERVKHIHS 325
EGGYNL ++S S + LGE PA L + E S + + +V + S
Sbjct: 365 EGGYNLRAISDSSLAVAQVLLGE--------TPAELTHVEASEAATEVVRQVAKVQS 413
>gi|119383151|ref|YP_914207.1| histone deacetylase superfamily protein [Paracoccus denitrificans
PD1222]
gi|119372918|gb|ABL68511.1| histone deacetylase superfamily [Paracoccus denitrificans PD1222]
Length = 319
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 143/269 (53%), Gaps = 14/269 (5%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + A+ DI H Y+S L + +A +G +++ TY + + + A
Sbjct: 52 LERREAPEAADQDILRAHPPEYLSLLRR---KAPGEGWSMLDSD--TYLSPGSLNAARHA 106
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
G A VD+V A + P F +RPPGHHA MGFC+F +VAI A A HG
Sbjct: 107 VGGVCAAVDAVLAGEA----PSAFVAMRPPGHHAERMKAMGFCIFSSVAIGALRALEHHG 162
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV ++DFDVHHGNGT D +D+ F STHQ YPGTG E G G +NLP
Sbjct: 163 LDRVAVLDFDVHHGNGTQDVLWDERRALFASTHQVPLYPGTGAPSERG---AHGQVVNLP 219
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L GSG R V+ + I + ++P L+LVSAG+DAH DPLASL + G + +
Sbjct: 220 LAPGSGGGEARAVW-QAICARVEAWRPQLVLVSAGFDAHAEDPLASLMWDDGDFTAITRM 278
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
I A C + V LEGGY+L +L S
Sbjct: 279 ICDTAA-ACSAPVVSALEGGYDLAALGRS 306
>gi|119897386|ref|YP_932599.1| histone deacetylase family protein [Azoarcus sp. BH72]
gi|119669799|emb|CAL93712.1| histone deacetylase family protein [Azoarcus sp. BH72]
Length = 308
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 139/269 (51%), Gaps = 15/269 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH +Y+ L M + GI ++ T + T + +L +AGAG+
Sbjct: 52 ATEEQVTRVHPASYLGEL---MANVPEHGIRHLDPD--TAMSPNTMKAALRSAGAGVLAT 106
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + F +RPPGHHA MGFC NVAIAAR+A AHGL+RV I+D
Sbjct: 107 DLVLKGEVES----AFCAVRPPGHHAEKAKAMGFCFLNNVAIAARHALEAHGLERVAIVD 162
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F DDP + +S Q YP +G + N+P+P G+
Sbjct: 163 FDVHHGNGTEDIFRDDPRVMMVSIFQHPFYPYSGV------ENPPAHMCNVPVPAGTRGD 216
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A R + ++ VP + P I VSAG+DAH D + SL Y IK +A+D
Sbjct: 217 AFRQIVSDIWVPALRNHNPQAIFVSAGFDAHYEDDMGSLGLVESDYVWATQQIKSVAEDC 276
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
R + LEGGY+L+SL+ SV +A
Sbjct: 277 GHKRVISVLEGGYSLSSLARSVVAHIKAL 305
>gi|302845232|ref|XP_002954155.1| hypothetical protein VOLCADRAFT_106247 [Volvox carteri f.
nagariensis]
gi|300260654|gb|EFJ44872.1| hypothetical protein VOLCADRAFT_106247 [Volvox carteri f.
nagariensis]
Length = 989
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/296 (39%), Positives = 159/296 (53%), Gaps = 34/296 (11%)
Query: 21 ASVDDIASVHARAYVSGLEKAM---------DRASQQG-----IILIEGSGPTYATATTF 66
A+ D++ +VH +A + +EKA D+ + G + +E G + F
Sbjct: 624 ATRDELLAVHNKALLDAVEKATQVAVLAAERDKTTWYGPLDAQLEAMEARGSKHIRDVYF 683
Query: 67 QESLAA-----AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
S AA AG+ + V + R G A+IRPPGHHA MGFC + N A
Sbjct: 684 NPSTAACARLAAGSAAEVARRVVSGSARH----GAAIIRPPGHHAESSVAMGFCYYNNAA 739
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGS--YPGTGKIDE 178
+AAR AQ A G KRV I+D+DVHHGNGT + FY+DP + ++STH+ D S YPGTG + E
Sbjct: 740 VAARAAQ-AAGAKRVLIMDWDVHHGNGTQEIFYEDPSVMYISTHRYDSSCFYPGTGGLTE 798
Query: 179 VGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
G G G G T+N+P G G D M F V+VP A F+PD+++VSAG+DA DPL
Sbjct: 799 TGSGPGLGFTVNVPWNGSGVRDADMLAAFRHVVVPLATEFRPDVVIVSAGFDAAEGDPLG 858
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ +T + AA + LA V LEGGYNL + + + R LGEP
Sbjct: 859 GCRVSTAAFSHFAAMLSALAP------TVMLLEGGYNLIATAAATEACLRVLLGEP 908
>gi|301612382|ref|XP_002935701.1| PREDICTED: histone deacetylase 4 [Xenopus (Silurana) tropicalis]
Length = 974
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 148/268 (55%), Gaps = 30/268 (11%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
AAG+ I L VA+ KN GFAL+RPPGHHA P MGFC F +VAIAA+ Q
Sbjct: 659 AAGSVIDLAFKVASRELKN------GFALVRPPGHHADPSTAMGFCFFNSVAIAAKQLQL 712
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
++++ I+D+DVHHGNGT FY DP++ ++S H+ DG+ +PG+G DEVG G+GEG
Sbjct: 713 RRDVRKILIVDWDVHHGNGTQRVFYTDPNVLYISLHRHDDGNFFPGSGAADEVGAGNGEG 772
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD T F V++P A F PD++LVSAG+DA H PL
Sbjct: 773 FNVNVAWTGGLDPPMGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAAEGHPA-PLGGY 831
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ T + + + LA G R V LEGG++L S+ + A LG +E
Sbjct: 832 KVTAKCFGHMTRQLMSLA----GGRVVLALEGGHDLTSICDASEACVSALLG-----NEL 882
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D L + P+ ++E V H+ S
Sbjct: 883 DPLPEETLRQRPNQNAVCSLETVIHVQS 910
>gi|67921302|ref|ZP_00514821.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 8501]
gi|67857419|gb|EAM52659.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 8501]
Length = 318
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/263 (38%), Positives = 149/263 (56%), Gaps = 19/263 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I + H Y+ +E A+ G +L E T + ++Q +L A A + VD+V
Sbjct: 73 IRNSHINEYIQRVEAI---ATNGGGLLDED---TVISPQSYQVALLAVNAWLDGVDTVTQ 126
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
++ + F L RPPGHHA+ K MGFC+F N AIAA YA + G +RV I+D+DVHH
Sbjct: 127 TQKQ-----AFVLSRPPGHHAVQKTGMGFCLFSNAAIAANYALQCKGAQRVAILDWDVHH 181
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D+P+I + S HQ +YPGTG+ E G+ D + LN+P+ GS + +
Sbjct: 182 GNGTQAIVEDNPNIAYCSLHQFPAYPGTGRASETGKYD---NILNIPMTPGSDLKSYQLA 238
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F + ++P FK DL++VSAGYDA+ DPLAS+ Y + + + S
Sbjct: 239 FSDQVIPFLAAFKGDLLIVSAGYDANQADPLASINLKPNDYAVFTQQLLTIT-----SSI 293
Query: 266 VFFLEGGYNLNSLSYSVADSFRA 288
+F LEGGY+L++LS SV + +A
Sbjct: 294 LFGLEGGYDLSALSDSVLATIQA 316
>gi|440800420|gb|ELR21459.1| hypothetical protein ACA1_184050 [Acanthamoeba castellanii str.
Neff]
Length = 410
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 166/322 (51%), Gaps = 30/322 (9%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH + +V + + + A G+ + TYA + + + AAG + L
Sbjct: 60 AGEEELMCVHTKEHVDRVHEKAEDAKGGGMAYFDAD--TYANEYSERAARLAAGGLVELT 117
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH-GLKRVFII 139
VA + GFALIRPPGHHA P GFC+F NVA+A + +K++ I+
Sbjct: 118 TKVATG----ELDNGFALIRPPGHHAEPGQSQGFCLFNNVAVAVQTILDTQPHIKKIMIV 173
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYPGTGKIDEVGRGDGEGSTLNLPLP-GG 196
D+DVHHGNGT FY+ + FLS H + YP +G ++ VG G+G+G +N+P G
Sbjct: 174 DWDVHHGNGTEKTFYETDKVLFLSLHRFEPDFYPNSGPLESVGAGEGKGYNINVPWNFFG 233
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
+G+ F +++VP A+ ++PDL+LVS G+DA DPL + T Y +Q+
Sbjct: 234 AGNAEYLYAFEQLVVPVAKAYQPDLVLVSCGFDAAWGDPLGGMTITASGY-------QQM 286
Query: 257 AKDLCGS---RCVFFLEGGYNLNSLSYSVADSFRAFLGE-----PSKASEFDNPAILYEE 308
+ L + + V LEGGYN+ ++ RA LGE + + D + Y+
Sbjct: 287 TRMLLAATNGKVVLALEGGYNVRIIATCAEACIRALLGEQEFNVEEEQRDLDKRKLQYDA 346
Query: 309 PSA-----KVKQAIERVKHIHS 325
+A K K+ + VK +H+
Sbjct: 347 AAAQELMNKAKKVVNAVKEVHA 368
>gi|384426653|ref|YP_005636010.1| acetoin utilization family protein [Xanthomonas campestris pv.
raphani 756C]
gi|341935753|gb|AEL05892.1| acetoin utilization family protein [Xanthomonas campestris pv.
raphani 756C]
Length = 302
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ ++DFDVHHGNGT F
Sbjct: 112 FCAVRPPGHHATGQVSMGFCLFNNIAVAAAHARDRHGLERITVVDFDVHHGNGTQAIFER 171
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 172 DPTVQYLSTHQSGLYPHSGSVHE----RGIGNIHNLLLPPGSDGLRFRNVWEDEMLPLID 227
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P LIL+SAG+DAH+ DPLA L + L ++ LA R V LEGGY+L
Sbjct: 228 AFRPQLILISAGFDAHLRDPLADLMLDADDFAWLTGALRALATRHARGRVVSMLEGGYDL 287
Query: 276 NSLSYS 281
+L S
Sbjct: 288 QALRES 293
>gi|327260798|ref|XP_003215220.1| PREDICTED: histone deacetylase 4-like [Anolis carolinensis]
Length = 1224
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 152/278 (54%), Gaps = 26/278 (9%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
+ +F + A G I LV VA + + GFA++RPPGHHA PMGFC F +
Sbjct: 901 WNEVHSFSAARLAVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNS 956
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKI 176
VAI+A+ Q+ + ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G
Sbjct: 957 VAISAKLLQQRLNVNKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAP 1016
Query: 177 DEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
DEVG G G G +N+ GG GDT F V++P A F PD++LVS+G+DA
Sbjct: 1017 DEVGIGPGAGFNVNMAFTGGLDPPMGDTEYMAAFRTVVMPIANEFAPDVVLVSSGFDAVE 1076
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
P A L G Y + A L K L G R + LEGG++L ++ +
Sbjct: 1077 GHP-APL----GGYNLSAKCFGYLTKQLMGLAGGRIILALEGGHDLTAICDASETCVSVL 1131
Query: 290 LGEPSKASEFD--NPAILYEEPSAKVKQAIERVKHIHS 325
LG +E D +L + P+A +IE+V IHS
Sbjct: 1132 LG-----NELDPIPEKVLQQRPNANAVHSIEKVIEIHS 1164
>gi|327301305|ref|XP_003235345.1| histone deacetylase [Trichophyton rubrum CBS 118892]
gi|326462697|gb|EGD88150.1| histone deacetylase [Trichophyton rubrum CBS 118892]
Length = 794
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 146/281 (51%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I VH + + ++ D + + + L Y + TF +L + G I
Sbjct: 213 ATEAEIMLVHTKEHYEFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETC 272
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA + + A+IRPPGHHA MGFC+F NV++AAR Q G +++ I
Sbjct: 273 KAVAEERVKN----AIAVIRPPGHHAESNKTMGFCLFNNVSVAARACQHVLGDKCRKIMI 328
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG FY+DP++ ++S H +DGS YPG G D G G G G +N+P
Sbjct: 329 LDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNWDYCGEGLGLGKNVNIPW 388
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P F PDL+++SAG+DA D L T Y ++
Sbjct: 389 PTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----SH 444
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ ++ +L + LEGGYN S+S S R +GEP
Sbjct: 445 MTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 485
>gi|406695694|gb|EKC98996.1| histone deacetylase clr3 [Trichosporon asahii var. asahii CBS 8904]
Length = 709
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 137/237 (57%), Gaps = 19/237 (8%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
FA++RPPGHHA P MGFC F NVA+AAR Q+ K+V I+D+DVHHGNGT AF++
Sbjct: 189 FAIVRPPGHHAEPDEHMGFCFFNNVAVAAREMQKEGLAKKVLILDWDVHHGNGTQRAFWN 248
Query: 156 DPDIFFLSTHQ-DGS--YPGT--GKIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEV 209
DP++ ++S H+ DG YP + G +D VG G GEG ++N+P P GG GD F ++
Sbjct: 249 DPNVLYISLHRHDGGKFYPSSDFGALDMVGEGPGEGKSVNIPWPSGGFGDGDYIYAFQKI 308
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
++P A F+PDL+++S+G+DA D L T Y ++ + L G R V L
Sbjct: 309 VMPIAYEFEPDLVIISSGFDAADGDHLGQCHVTPAGY----GHMTHMLSALAGGRLVVAL 364
Query: 270 EGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL-YEEPSAKVKQAIERVKHIHS 325
EGGYNL ++S S + LGE PA L + E S + + +V + S
Sbjct: 365 EGGYNLRAISDSSLAVAQVLLGE--------TPAELTHVEASEAATEVVRQVAKVQS 413
>gi|288818692|ref|YP_003433040.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|384129443|ref|YP_005512056.1| histone deacetylase superfamily protein [Hydrogenobacter
thermophilus TK-6]
gi|288788092|dbj|BAI69839.1| acetoin utilization protein [Hydrogenobacter thermophilus TK-6]
gi|308752280|gb|ADO45763.1| histone deacetylase superfamily [Hydrogenobacter thermophilus TK-6]
Length = 309
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 146/270 (54%), Gaps = 12/270 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A V+++A H Y+ ++ D S G L TYA A +++ +L A G + +
Sbjct: 50 AKVEEVAFNHDPTYI---QEVHDFCSAGGGYL---DPDTYAVAESYEVALYAVGGVLEGI 103
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ + + F IRPPGHHA MGFC+F NVA+ A Y G KRVFIID
Sbjct: 104 DALLSG----ELETVFCAIRPPGHHAEYSKAMGFCLFNNVAVGAWYLLNK-GFKRVFIID 158
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FD HHGNGT +FY++ +F+ STH+ YPGTG E G G G G T N+PL G+GD
Sbjct: 159 FDAHHGNGTQKSFYEEDRVFYFSTHEYPFYPGTGSDKERGAGKGLGYTYNVPLNAGAGDE 218
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
+++ ++ + ++P +L+SAGYD H DPL L +T + +I +L
Sbjct: 219 EYESIYGSLLPKLMKEYEPQFVLISAGYDIHKDDPLTYLNVSTQGVRNIVKSILITCSEL 278
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+F LEGGYNL +L+ V+ + L
Sbjct: 279 -NVPSLFALEGGYNLKALAECVSATMEIML 307
>gi|440733618|ref|ZP_20913317.1| histone deacetylase, partial [Xanthomonas translucens DAR61454]
gi|440359900|gb|ELP97187.1| histone deacetylase, partial [Xanthomonas translucens DAR61454]
Length = 215
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 119/195 (61%), Gaps = 7/195 (3%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA MGFC+F N+A+AA +A+ HGL+R+ I+DFDVHHGNGT F
Sbjct: 25 FCAVRPPGHHATATTAMGFCLFNNIAVAAAHARDTHGLERIAIVDFDVHHGNGTQAIFER 84
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + +LSTHQ G +P +G + + G G+ N LP GSG R + + ++P
Sbjct: 85 DPRVQYLSTHQSGLFPNSGGVHD----RGVGNLHNALLPPGSGGFRFRNTWADQMLPLLD 140
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
FKP L+L+SAG+DAH+ DPLA L T + L A ++ LA+ R V LEGGY+L
Sbjct: 141 AFKPQLLLISAGFDAHMRDPLADLMLETEDFAWLTAELRALAQRHARGRVVSLLEGGYDL 200
Query: 276 NSL---SYSVADSFR 287
+L S + D+ R
Sbjct: 201 QALRECSVAHVDALR 215
>gi|149028424|gb|EDL83809.1| histone deacetylase 6 [Rattus norvegicus]
Length = 1012
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 155/283 (54%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L +A ++ + + EG+ Y +TF + A GA
Sbjct: 389 PALDSELLTCHSAEYVERL-RATEKMKTRDLHR-EGANFESIYICPSTFACAQLATGAAC 446
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 447 RLVEAVLSGEVLN----GIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRI 502
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F +DP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 503 LIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNV 562
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 563 PWNGPRMGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 618
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 619 AHLTHLLMGLAGGRIILILEGGYNLTSISESMAACTHSLLGDP 661
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/276 (32%), Positives = 141/276 (51%), Gaps = 14/276 (5%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH+ Y+ +E + +L Y ++ + A G+ + LVD+V ++
Sbjct: 3 VHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSYSCACLATGSVLRLVDAVMGAEI 62
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++R+ I+D+DVHHG G
Sbjct: 63 RN----GMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQG 118
Query: 149 TNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPLPG-GSGDTAM 202
T F DP + + S H + G + G G G+G T+N+P G D
Sbjct: 119 TQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADY 178
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
F +++P A F+P L+LV+AG+DA DP + T + A++ L G
Sbjct: 179 IAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPAGF----AHLTHFLMGLAG 234
Query: 263 SRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
+ + LEGGYNL++L+ V+ S LG+P E
Sbjct: 235 GKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLE 270
>gi|109510484|ref|XP_228753.4| PREDICTED: histone deacetylase 6 [Rattus norvegicus]
gi|109511550|ref|XP_001057931.1| PREDICTED: histone deacetylase 6 isoform 1 [Rattus norvegicus]
gi|392343069|ref|XP_003754788.1| PREDICTED: histone deacetylase 6 isoform 2 [Rattus norvegicus]
gi|392355490|ref|XP_003752058.1| PREDICTED: histone deacetylase 6-like [Rattus norvegicus]
Length = 1152
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 155/283 (54%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L +A ++ + + EG+ Y +TF + A GA
Sbjct: 529 PALDSELLTCHSAEYVERL-RATEKMKTRDLHR-EGANFESIYICPSTFACAQLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F +DP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEEDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLATWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLTSISESMAACTHSLLGDP 801
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 145/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++R+ I+D
Sbjct: 195 DAVMGAEIRN----GMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H + G + G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 310
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 VGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L G + + LEGGYNL++L+ V+ S LG+P E
Sbjct: 367 HFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLE 410
>gi|326475552|gb|EGD99561.1| histone deacetylase HdaA [Trichophyton tonsurans CBS 112818]
Length = 794
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 146/281 (51%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I VH + + ++ D + + + L Y + TF +L + G I
Sbjct: 213 ATEAEIMLVHTKEHYEFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETC 272
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA + + A+IRPPGHHA MGFC+F NV++AAR Q G +++ I
Sbjct: 273 KAVAEERVKN----AIAVIRPPGHHAESNKTMGFCLFNNVSVAARACQHVLGDKCRKIMI 328
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG FY+DP++ ++S H +DGS YPG G D G G G G +N+P
Sbjct: 329 LDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNWDYCGEGLGLGKNVNIPW 388
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P F PDL+++SAG+DA D L T Y ++
Sbjct: 389 PTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----SH 444
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ ++ +L + LEGGYN S+S S R +GEP
Sbjct: 445 MTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 485
>gi|254562158|ref|YP_003069253.1| histone deacetylase [Methylobacterium extorquens DM4]
gi|254269436|emb|CAX25402.1| Histone deacetylase family protein [Methylobacterium extorquens
DM4]
Length = 283
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH +YV + A + +G I+G T + + L A G VD+V
Sbjct: 32 VHPASYVETIVAA---SPDEGFFQIDGD--TLMSPGSLNTCLHAIGGSNHAVDAVM---- 82
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ + F +RPPGHHA MGFC+F + AIA R+AQ+A G RV ++DFDVHHGNG
Sbjct: 83 KGECANAFVAMRPPGHHAERDRAMGFCLFNHAAIAVRHAQKAFGATRVALVDFDVHHGNG 142
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
+ D F+ D + + STHQ +PG+G E RGD + + +N PL G R F
Sbjct: 143 SQDIFWADKTVMYASTHQMPLFPGSGATGE--RGDHD-TIVNAPLKAFDGSELFREAFDA 199
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
I+P F PDLI++SAG+DAH LDPLA++Q + + ++A G R V
Sbjct: 200 RILPRLDAFAPDLIVISAGFDAHKLDPLANIQLDEADFGWATRRLMEVADRHAGGRVVSI 259
Query: 269 LEGGYNLNSLSYSVADSFRAFLGE 292
LEGGY+L+ L+ SVA A +G
Sbjct: 260 LEGGYSLDGLARSVAAHMDALMGR 283
>gi|238879680|gb|EEQ43318.1| histone deacetylase HDA1 [Candida albicans WO-1]
Length = 833
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 23/313 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH+ ++ ++ D + Q + E Y ++ + + G I
Sbjct: 187 ATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P P GFC+F NVA+AA+ + + ++R+ I
Sbjct: 247 KAVIEGRVKN----SLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+DP + ++S H ++G YPGT G +++VG G GEG T+N+P
Sbjct: 303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G D F+++I P F PDLI+VS+G+DA D + + T Y +
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K +A+ + LEGGYNL+S+S S + +GEP + + + P A+
Sbjct: 423 LKGIAR----GKLAVILEGGYNLDSISKSALAVAKVLVGEPPENT-------ITLRPQAE 471
Query: 313 VKQAIERVKHIHS 325
+ ++ V I S
Sbjct: 472 AIEVVDEVIKIQS 484
>gi|68475296|ref|XP_718366.1| likely class II histone deacetylase subunit Hda1p [Candida albicans
SC5314]
gi|68475497|ref|XP_718271.1| likely class II histone deacetylase subunit Hda1p [Candida albicans
SC5314]
gi|46440031|gb|EAK99342.1| likely class II histone deacetylase subunit Hda1p [Candida
albicans SC5314]
gi|46440130|gb|EAK99440.1| likely class II histone deacetylase subunit Hda1p [Candida
albicans SC5314]
Length = 833
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 165/313 (52%), Gaps = 23/313 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH+ ++ ++ D + Q + E Y ++ + + G I
Sbjct: 187 ATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P P GFC+F NVA+AA+ + + ++R+ I
Sbjct: 247 KAVIEGRVKN----SLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+DP + ++S H ++G YPGT G +++VG G GEG T+N+P
Sbjct: 303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G D F+++I P F PDLI+VS+G+DA D + + T Y +
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K +A+ + LEGGYNL+S+S S + +GEP + + + P A+
Sbjct: 423 LKGIAR----GKLAVILEGGYNLDSISKSALAVAKVLVGEPPENT-------ITLRPQAE 471
Query: 313 VKQAIERVKHIHS 325
+ ++ V I S
Sbjct: 472 AIEVVDEVIKIQS 484
>gi|410899128|ref|XP_003963049.1| PREDICTED: histone deacetylase 7-like [Takifugu rubripes]
Length = 895
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 149/275 (54%), Gaps = 21/275 (7%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
+ + T S AAG+ + L VA + + GFA++RPPGHHA P PMGFC F +
Sbjct: 574 WNESHTSTASRMAAGSVVELAFRVAKGELKN----GFAVVRPPGHHADPSNPMGFCYFNS 629
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKI 176
VAIAA+ Q + ++ I+D+DVHHGNGT + FY DP + ++S H+ DG+ +PG+G
Sbjct: 630 VAIAAKQLQHKLSVSKILIVDWDVHHGNGTQEVFYSDPSVLYISLHRYDDGNFFPGSGSP 689
Query: 177 DEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
EVG G GEG +N+ GG GD F V++P AQ F PD++LVSAG+DA
Sbjct: 690 AEVGSGAGEGFNVNISWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDAAE 749
Query: 233 LD--PLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ PL + + + L + LA G R V LEGG++L ++ + L
Sbjct: 750 GNPAPLGGYKVSAKCFSFLTHQLMSLA----GGRVVLVLEGGHDLTAICDASEACVSTLL 805
Query: 291 GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
G +E +L ++P+A +++ V I S
Sbjct: 806 GIQDPLAE----EVLLKKPNANAVHSLQTVIKIQS 836
>gi|152981105|ref|YP_001354549.1| histone deacetylase superfamily protein [Janthinobacterium sp.
Marseille]
gi|151281182|gb|ABR89592.1| histone deacetylase superfamily protein [Janthinobacterium sp.
Marseille]
Length = 322
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 150/278 (53%), Gaps = 11/278 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E ++ + + + +H +V+ +E D + +G + ++G G T + + + +
Sbjct: 54 VEWRDAPMGTREQVLLIHTEDFVTDVE---DASPHRGYMPLDG-GDTVMSPGSLEAVMRC 109
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA A VD V ++ F RP GHHA P MGFC++ AIAA YA H
Sbjct: 110 VGAACAGVDLVLDNEAHN----VFCATRPCGHHAEPSRAMGFCIYNQAAIAAAYAYEVHK 165
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L+RV +IDFDVHHGNGT AFYD P++F+ S+HQ YPGTG E G + +N+P
Sbjct: 166 LERVAVIDFDVHHGNGTQAAFYDRPELFYASSHQSHFYPGTGLEKETGVSH---NIVNVP 222
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
LP G R ++P + F P+LI++SAG+DAH LDPLA L Y +
Sbjct: 223 LPRGCDSALFREQTAAKMLPAIRAFNPELIIISAGFDAHHLDPLAGLNLQDDDYDWVTRE 282
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ ++A + C R V LEGGY+L L+ S A +A +
Sbjct: 283 LMKIADETCEGRIVSILEGGYSLEGLASSTAVHVKALM 320
>gi|451995023|gb|EMD87492.1| hypothetical protein COCHEDRAFT_1145200 [Cochliobolus
heterostrophus C5]
Length = 847
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/313 (35%), Positives = 155/313 (49%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I +H + +E + S + E Y +T++ + AAG I
Sbjct: 182 ATRPEILLIHTEEHYDLVESFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEAC 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V R A+IRPPGHHA P GFC+F NV IAAR Q A+ ++V I
Sbjct: 242 KAVVQGAVR----NAIAIIRPPGHHAESDQPSGFCIFNNVPIAARVCQDAYPETCRKVLI 297
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H +DG+ YP G +D G G GEG +N+P
Sbjct: 298 LDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKNVNIPW 357
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G GD+ F +V++P A F PDL+++SAG+DA D L T Y +
Sbjct: 358 AEHGMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHM 417
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ LAK + V LEGGYNL S++ S + + EP D PA P
Sbjct: 418 LMSLAK----GKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPA-----PKDS 468
Query: 313 VKQAIERVKHIHS 325
+E VK HS
Sbjct: 469 AVYIVENVKRQHS 481
>gi|254513025|ref|ZP_05125091.1| histone deacetylase family protein [Rhodobacteraceae bacterium
KLH11]
gi|221533024|gb|EEE36019.1| histone deacetylase family protein [Rhodobacteraceae bacterium
KLH11]
Length = 308
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F RPPGHHA + MGFC+FGN A+AA++A HGL RV ++DFDVHHGNGT D +D
Sbjct: 113 FCATRPPGHHAETETAMGFCLFGNAALAAKHALDHHGLSRVAVVDFDVHHGNGTQDLLWD 172
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
+ +++ Q +PG+G+ DE G + + LN+PL SG MR + P +
Sbjct: 173 ERRALVITSQQMPLWPGSGRPDETGAYE---TVLNIPLAPASGGAEMRAAYAAQAFPRLR 229
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
FKP+LI++SAG+DAH DPLASL ++TG + + A + ++A +LC R V LEGGY
Sbjct: 230 AFKPELIIISAGFDAHQDDPLASLNWSTGDFAWITAELCRIAGELCDGRIVSTLEGGY 287
>gi|148672426|gb|EDL04373.1| histone deacetylase 10, isoform CRA_b [Mus musculus]
Length = 478
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/238 (41%), Positives = 139/238 (58%), Gaps = 18/238 (7%)
Query: 65 TFQESLAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
TF + AAGA + LVD+V A N G AL+RPPGHH+ GFCVF NVA+
Sbjct: 41 TFHCARLAAGAALQLVDAVLTGAVHN------GLALVRPPGHHSQRAAANGFCVFNNVAL 94
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKID 177
AA++A++ +GL+R+ I+D+DVHHG G F DDP + + S H + GS+ D
Sbjct: 95 AAKHAKQKYGLQRILIVDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDAD 154
Query: 178 EVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
VG+G G+G T+NLP G G+ F V++P A F P+L+LVSAG+D+ + DP
Sbjct: 155 AVGQGQGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPE 214
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+Q T + A++ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 215 GQMQATPECF----AHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 268
>gi|298674668|ref|YP_003726418.1| histone deacetylase superfamily protein [Methanohalobium
evestigatum Z-7303]
gi|298287656|gb|ADI73622.1| histone deacetylase superfamily [Methanohalobium evestigatum
Z-7303]
Length = 454
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 169/312 (54%), Gaps = 29/312 (9%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
D+ +H ++YVS ++ S++G + S TY T T+ + +AGA I + V
Sbjct: 150 DLLKIHTKSYVSFIK----NYSKKGGGFLGDS--TYVTKDTYDVAKMSAGAAIRSAELVI 203
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ + FAL+RPPGHHA GFC+F N AI ARY Q+ G+++V I+D+D H
Sbjct: 204 DN----NYSYSFALLRPPGHHAGKSRYGGFCIFNNAAILARYLQQKKGIEKVMIVDWDAH 259
Query: 145 HGNGTNDAFYDDPDIFFLSTHQD--GSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAM 202
GNGT D FYDDPD+ LS H+ YP TG + ++G G GEG +N+ +P GS +
Sbjct: 260 AGNGTMDIFYDDPDVITLSIHRSPHDFYPRTGFMSQIGEGAGEGYNINIEMPVGSENVEY 319
Query: 203 RTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCG 262
+ F EVI+P +R PD ++ G+D + + + T+ YY + +IK + +
Sbjct: 320 KLAFDEVIIPLIKRHSPDFLICCCGFDGYYQEKTVQMNLTSKGYYQMIRSIKSVFPE--- 376
Query: 263 SRCVFFLEGGYNLNS--LSYSVADSFRAFLGEPS------KASEFDNPAILYEEPSAKVK 314
V +EGGY+ ++ L +SV + A L P+ K S+++ + L+++ K
Sbjct: 377 -NFVILMEGGYHKHNGKLCHSVIN---ALLDRPNPIHDDLKYSKYE--SQLHKKVYNKAF 430
Query: 315 QAIERVKHIHSL 326
+ I ++K + SL
Sbjct: 431 ENIFKIKEMFSL 442
>gi|308478451|ref|XP_003101437.1| hypothetical protein CRE_13458 [Caenorhabditis remanei]
gi|308263338|gb|EFP07291.1| hypothetical protein CRE_13458 [Caenorhabditis remanei]
Length = 364
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 118/193 (61%), Gaps = 10/193 (5%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
++RPPGHHA GFC+F NVA+AA+YAQR + KR+ I+D+DVHHGNGT + FY
Sbjct: 50 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRYKAKRILILDWDVHHGNGTQEIFY 109
Query: 155 DDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGEGSTLNLPLPGGS-GDTAMRTVFHE 208
+D ++ ++S H+ YP D +VG G GEG ++N+P G GD + F
Sbjct: 110 EDANVMYMSIHRHDKGNFYPVGEPKDYFDVGEGAGEGMSVNVPFSGAQMGDIEYQMAFQR 169
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
VI+P + +F PDL+L+SAG+DA + DPL + T T+ ++ + LA R +
Sbjct: 170 VIMPISYQFNPDLVLISAGFDAAIDDPLGDYRVTPETFALMTYQLSSLA----SGRVITV 225
Query: 269 LEGGYNLNSLSYS 281
LEGGYNL S+S S
Sbjct: 226 LEGGYNLTSISNS 238
>gi|442610674|ref|ZP_21025384.1| Acetylspermidine deacetylase [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
gi|441747703|emb|CCQ11446.1| Acetylspermidine deacetylase [Pseudoalteromonas luteoviolacea B =
ATCC 29581]
Length = 306
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 147/283 (51%), Gaps = 18/283 (6%)
Query: 9 GSEIIELKNFSP-ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
G ++ L+ +P SVDDI +VH+ A + E + +G L E G T+ +F+
Sbjct: 38 GLDLSLLQKTAPKCSVDDIRTVHSSAMI---EHVLSSLPSEG--LNELDGDTWLCPESFK 92
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
A GAGI VD + + F +RPPGHHA GFCVF NVAIA ++A
Sbjct: 93 AIERAIGAGIMAVDGILNDEFDA----AFCAVRPPGHHANQTTSSGFCVFNNVAIAVKHA 148
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
Q G++RV I+D DVHHGNGT D F +D ++ F S Q YP T +
Sbjct: 149 QEL-GIERVAILDIDVHHGNGTQDIFREDKNVLFCSLFQYPFYPNTPI-------ENNDH 200
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N PLP S + V + +P + FKP ++ +SAG+DAH+ D +ASL F Y
Sbjct: 201 IVNSPLPINSNGNDFKLVVEQHWLPKLREFKPQMLFISAGFDAHLEDDMASLSFVEADYS 260
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ I + K++ V FLEGGY L+SL SVA RA +
Sbjct: 261 WFSEQIASVVKEIKCKGIVSFLEGGYELSSLGRSVAAHLRALV 303
>gi|325108524|ref|YP_004269592.1| histone deacetylase superfamily protein [Planctomyces brasiliensis
DSM 5305]
gi|324968792|gb|ADY59570.1| histone deacetylase superfamily [Planctomyces brasiliensis DSM
5305]
Length = 322
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 10/227 (4%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
T + ++ +L AA + V ++ + D F + RPPGHHA+ MGFC+
Sbjct: 93 TVVSGESYDVALLAASTAVEAVKAIL----QGDCKHAFCVTRPPGHHAVAGSAMGFCLLN 148
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDE 178
N AIAA+YA L RV I+D+DVHHGNGT D FY + ++++ S+H+ YPGTG +E
Sbjct: 149 NAAIAAQYAIDHFKLNRVLIVDWDVHHGNGTQDLFYKNGEVWYFSSHRHPYYPGTGLAEE 208
Query: 179 VGRGDGEGSTLNLPLPGGSGDTAMRTV---FHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
G G G G+ NLPL S DT T+ F EV+ A+R +P+LI++SAG+DAH DP
Sbjct: 209 TGEGAGVGANCNLPL---SSDTPRETILGRFEEVLADFAERCQPELIVISAGFDAHQDDP 265
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ SL T+ + ++K LA+ R + LEGGY+ L+ V
Sbjct: 266 IGSLGLTSEDFGRWTVSVKDLAEKYAQGRILSVLEGGYSPEVLAECV 312
>gi|319784915|ref|YP_004144391.1| histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170803|gb|ADV14341.1| Histone deacetylase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 373
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/281 (35%), Positives = 146/281 (51%), Gaps = 22/281 (7%)
Query: 5 SEFRGSEIIELKNFS---------PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEG 55
S+ R + +I++ S P SVDD+ VH + +V + +R S
Sbjct: 40 SKRRLNNLIQVSGLSRHLVPIIPEPVSVDDLLRVHTQRHVDDIRMLSERGSGF------- 92
Query: 56 SGPTYATA-TTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGF 114
+GP +F +L +AG A + +V R D +AL RPPGHHA P MG
Sbjct: 93 AGPQAPIGLNSFDIALLSAGTTYAAMRAVL--TGRVDN--AYALARPPGHHAEPDQAMGN 148
Query: 115 CVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GT 173
C+F N+ +A R Q L R I+D+DVHHGNGT FY DP + +S HQD YP G
Sbjct: 149 CLFSNIGVAVRRLQHEGLLGRAAIVDWDVHHGNGTETVFYSDPSVLTISVHQDNLYPTGR 208
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
G + + G+ GEG +N+PLP GSG A F V+ P + ++PDL++V++G+DA
Sbjct: 209 GALADNGKDAGEGFNINIPLPAGSGTGAYEATFDRVVAPALRAYRPDLVIVASGFDASGF 268
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
DPL + + + LAA + LA + R + EGGY+
Sbjct: 269 DPLGRMMLNSECFRRLAARMVALAAETSQGRLMMTHEGGYS 309
>gi|326922329|ref|XP_003207402.1| PREDICTED: histone deacetylase 4-like [Meleagris gallopavo]
Length = 1081
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 147/266 (55%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 771 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 826
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 827 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 886
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GDT T F V++P A F PD++LVS+G+DA P G
Sbjct: 887 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTP-----LG 941
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
Y + A L K L G R V LEGG++L ++ + A LG +E D
Sbjct: 942 GYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 996
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + +A ++E+V IHS
Sbjct: 997 LPEKVLQQRANANAVHSMEKVIEIHS 1022
>gi|66769738|ref|YP_244500.1| acetoin utilization family protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|66575070|gb|AAY50480.1| acetoin utilization family protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 302
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ ++DFDVHHGNGT F
Sbjct: 112 FCAVRPPGHHATGQVSMGFCLFNNIAVAAAHARDRHGLERITVVDFDVHHGNGTQAIFER 171
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 172 DPTVQYLSTHQSGLYPHSGSVHE----RGIGNIHNLLLPPGSDGLRFRNVWEDEMLPLID 227
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P L+L+SAG+DAH+ DPLA L + L ++ LA R V LEGGY+L
Sbjct: 228 AFRPQLVLISAGFDAHLRDPLADLMLDADDFAWLTGALRALATRHARGRVVSMLEGGYDL 287
Query: 276 NSLSYS 281
+L S
Sbjct: 288 QALRES 293
>gi|119182795|ref|XP_001242509.1| hypothetical protein CIMG_06405 [Coccidioides immitis RS]
Length = 724
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 147/284 (51%), Gaps = 19/284 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I+ +H + + D + + I L Y TF ++ A G I
Sbjct: 182 ATHEEISLIHDSEHYDFVLSTKDMSEDELIALESTRDSIYFNTLTFTSAILACGGAIETC 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA--HGLKRVFI 138
+V + K + A+IRPPGHHA MGFC+F NV++AAR Q+ +++ I
Sbjct: 242 KAVVSGKVKN----AIAVIRPPGHHAEQCQAMGFCLFNNVSVAARVCQKTFKDKCRKIMI 297
Query: 139 IDFDVHH---GNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLN 190
+D+DVHH GNG +AFYDDP++ ++S H +DG+ YPG G D G G+G G +N
Sbjct: 298 VDWDVHHDLLGNGVQNAFYDDPNVLYISLHVYKDGAFYPGGEQGNWDHCGEGNGLGKNVN 357
Query: 191 LPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYML 249
+P P G GD F EVI+P F PDL+++SAG+DA D L T Y
Sbjct: 358 IPWPTQGMGDGDYLYAFQEVIMPIGYEFNPDLVIISAGFDAAAGDELGGCFVTPPCY--- 414
Query: 250 AANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ + +L + LEGGYN S+S S R +GEP
Sbjct: 415 -AHMTSMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 457
>gi|45383522|ref|NP_989644.1| histone deacetylase 4 [Gallus gallus]
gi|15214038|sp|P83038.1|HDAC4_CHICK RecName: Full=Histone deacetylase 4; Short=HD4
gi|14495171|dbj|BAB60957.1| histone deacetylase-4 [Gallus gallus]
Length = 1080
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 147/266 (55%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 770 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 825
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 826 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 885
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GDT T F V++P A F PD++LVS+G+DA P G
Sbjct: 886 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTP-----LG 940
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
Y + A L K L G R V LEGG++L ++ + A LG +E D
Sbjct: 941 GYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 995
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + +A ++E+V IHS
Sbjct: 996 LPEKVLQQRANANAVHSMEKVIEIHS 1021
>gi|395851560|ref|XP_003798321.1| PREDICTED: histone deacetylase 4 [Otolemur garnettii]
Length = 1041
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 147/266 (55%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AAR Q+
Sbjct: 731 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAARLLQQRL 786
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 787 HVSKILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGMGFN 846
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GDT F V++P A F PD++LVS+G+DA H PL
Sbjct: 847 VNMAFTGGLSPPMGDTEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 905
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGG++L ++ + A LG +E D
Sbjct: 906 SAKCFGYLTKQLMALA----GGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 956
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 957 LPEKVLQQRPNANAVRSMEKVVEIHS 982
>gi|326483151|gb|EGE07161.1| histone deacetylase hda1 [Trichophyton equinum CBS 127.97]
Length = 796
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 146/281 (51%), Gaps = 16/281 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I VH + + ++ D + + + L Y + TF +L + G I
Sbjct: 213 ATEAEIMLVHTKEHYEFVKSTKDMSEDELLELEHTRDSIYFNSLTFTSALLSCGGAIETC 272
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG--LKRVFI 138
+VA + + A+IRPPGHHA MGFC+F NV++AAR Q G +++ I
Sbjct: 273 KAVAEERVKN----AIAVIRPPGHHAENNKTMGFCLFNNVSVAARACQHVLGDKCRKIMI 328
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG FY+DP++ ++S H +DGS YPG G D G G G G +N+P
Sbjct: 329 LDWDVHHGNGVQRMFYNDPNVLYISIHVYRDGSFYPGGDEGNWDYCGEGLGLGKNVNIPW 388
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F EV++P F PDL+++SAG+DA D L T Y ++
Sbjct: 389 PTQGMGDGDYLYAFQEVVMPIGYEFDPDLVIISAGFDAAAGDELGGCFVTPPCY----SH 444
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ ++ +L + LEGGYN S+S S R +GEP
Sbjct: 445 MTRMLMNLANGKVAVCLEGGYNFRSISKSALAVTRTLMGEP 485
>gi|21230269|ref|NP_636186.1| acetoin utilization family protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|188992951|ref|YP_001904961.1| Histone deacetylase family protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21111815|gb|AAM40110.1| acetoin utilization family protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|167734711|emb|CAP52921.1| Histone deacetylase family protein [Xanthomonas campestris pv.
campestris]
Length = 302
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F +RPPGHHA + MGFC+F N+A+AA +A+ HGL+R+ ++DFDVHHGNGT F
Sbjct: 112 FCAVRPPGHHATGQVSMGFCLFNNIAVAAAHARDRHGLERITVVDFDVHHGNGTQAIFER 171
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQ 215
DP + +LSTHQ G YP +G + E G G+ NL LP GS R V+ + ++P
Sbjct: 172 DPTVQYLSTHQSGLYPHSGSVHE----RGIGNIHNLLLPPGSDGLRFRNVWEDEMLPLID 227
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F+P L+L+SAG+DAH+ DPLA L + L ++ LA R V LEGGY+L
Sbjct: 228 AFRPQLVLISAGFDAHLRDPLADLMLDADDFAWLTGALRALATRHARGRVVSMLEGGYDL 287
Query: 276 NSLSYS 281
+L S
Sbjct: 288 QALRES 293
>gi|441209584|ref|ZP_20974269.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
gi|440627075|gb|ELQ88895.1| histone deacetylase-like amidohydrolase [Mycobacterium smegmatis
MKD8]
Length = 369
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/268 (38%), Positives = 147/268 (54%), Gaps = 19/268 (7%)
Query: 12 IIELKNFSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
I EL +P AS +D+ VH AY+ +E+ G GP ++ +
Sbjct: 58 IDELIRIAPRTASREDLLRVHDAAYIDRIERESADRGGDGGDGFTPFGPG-----SYDIA 112
Query: 70 LAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
AAG IA ++V A+ N +AL+RPPGHHA MGFC+F NV +A YA
Sbjct: 113 RLAAGGTIAAAEAVLTGAADN------AYALVRPPGHHARRDTGMGFCIFSNVCVAIEYA 166
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEG 186
+ G++RV I+D+DVHHGNG ++DD D+ +S HQD +P TG + + G G
Sbjct: 167 RAHLGVQRVAIVDYDVHHGNGAESIYWDDSDVLTISLHQDRLFPQDTGAVTDTG---ASG 223
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+ +N+PL GSG+ A V VP F PD+I VS+G+D +DPL + T+G +
Sbjct: 224 TNINVPLHAGSGNGAYLAAIERVAVPAVTAFAPDIIFVSSGFDPSPVDPLGCMTVTSGGF 283
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+AA + LA+D+CG + VF EGGY+
Sbjct: 284 KDMAALLVTLAEDVCGGKIVFSHEGGYS 311
>gi|218531168|ref|YP_002421984.1| histone deacetylase superfamily protein [Methylobacterium
extorquens CM4]
gi|218523471|gb|ACK84056.1| histone deacetylase superfamily [Methylobacterium extorquens CM4]
Length = 309
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 142/264 (53%), Gaps = 12/264 (4%)
Query: 29 VHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKN 88
VH +YV + A + +G I+G T + + L A G VD+V
Sbjct: 58 VHPASYVETIVAA---SPDEGFFQIDGD--TLMSPGSLNTCLHAIGGSNHAVDAVM---- 108
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
+ + F +RPPGHHA MGFC+F + AIA R+AQ+A G RV ++DFDVHHGNG
Sbjct: 109 KGECANAFVAMRPPGHHAERDRAMGFCLFNHAAIAVRHAQKAFGATRVALVDFDVHHGNG 168
Query: 149 TNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHE 208
+ D F+ D + + STHQ +PG+G E RGD + + +N PL G R F
Sbjct: 169 SQDIFWADKTVMYASTHQMPLFPGSGATGE--RGDHD-TIVNAPLKAFDGSELFREAFDA 225
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
I+P F PDLI++SAG+DAH LDPLA++Q + + ++A G R V
Sbjct: 226 RILPRLDAFAPDLIVISAGFDAHKLDPLANIQLDEADFGWATRRLMEVADRHAGGRVVSV 285
Query: 269 LEGGYNLNSLSYSVADSFRAFLGE 292
LEGGY+L+ L+ SVA A +G
Sbjct: 286 LEGGYSLDGLARSVAAHMDALMGR 309
>gi|448316067|ref|ZP_21505705.1| histone deacetylase [Natronococcus jeotgali DSM 18795]
gi|445610413|gb|ELY64187.1| histone deacetylase [Natronococcus jeotgali DSM 18795]
Length = 339
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/287 (37%), Positives = 153/287 (53%), Gaps = 20/287 (6%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL-- 70
++ P VD I VH R Y+ + + +G G T +E+
Sbjct: 38 VQYVEADPVDVDVIDGVHDRDYLESVRE----------FCADGGGNWDPDTTAVEETWDA 87
Query: 71 ---AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+A A A ++ R P F++ RPPGHHA+ MGFC NVA+AA++A
Sbjct: 88 VRYSAGQACWAAETALDGDDGRETP---FSIGRPPGHHAVSDDAMGFCFVNNVAVAAQHA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+ RV I+D+DVHHGNGT D FYD D+FF S H+ G YPGTG ++E G G GEG+
Sbjct: 145 LETRDVDRVAIVDWDVHHGNGTQDIFYDRGDVFFASIHEQGLYPGTGAVEETGEGSGEGA 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
T+NLP+P G+ D I + + PDL+L+SAG+DAH DP++ ++ +T Y
Sbjct: 205 TMNLPMPAGTDDRDYLEAVEGPIATALEAYDPDLLLISAGFDAHRHDPISRIRLSTEAYA 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG-EP 293
+L ++ +A D + F LEGGY L+ L+ +VA F G EP
Sbjct: 265 LLTDRLRGIA-DRTDAALGFVLEGGYGLDVLADTVALVHETFDGREP 310
>gi|47216260|emb|CAG05956.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1014
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 173/335 (51%), Gaps = 51/335 (15%)
Query: 21 ASVDDIASVHARAYV-----SGL-------EKAMDRASQQGIILIEGSGPTYATATTFQE 68
AS+D+I SVH+ + S L +K + SQ+ ++ G + T + E
Sbjct: 624 ASLDEIQSVHSEFHTLLYGTSPLNRHKLDHKKLLGPISQKMYAVLPCGGIGVDSDTVWNE 683
Query: 69 SLA------AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAI 122
+ A G+ I L VAA + + GFA++RPPGHHA MGFC F +VAI
Sbjct: 684 MHSSSAVRMAVGSVIELAFRVAAGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAI 739
Query: 123 AARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEV 179
A+ Q+ G+ ++ I+D+D+HHGNGT AFY DP + ++S H+ DG+ +PG+G +EV
Sbjct: 740 TAKLLQQKMGVGKILIVDWDIHHGNGTQQAFYSDPSVLYISLHRYDDGNFFPGSGAPEEV 799
Query: 180 GRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
G G G G +N+ GG GD T F V++P AQ F PD++LVSAG+DA
Sbjct: 800 GSGAGNGFNVNIAWTGGVEPPMGDVEYLTAFRYVVMPIAQHFSPDVVLVSAGFDA----- 854
Query: 236 LASLQFTTGTYYMLA---ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ Q G Y + A + QL DL G R V LEGG++L ++ + A LG+
Sbjct: 855 VEGHQSPLGGYNVSAKCFGRLTQLLMDLAGGRVVMALEGGHDLTAICDASEACVSALLGD 914
Query: 293 PSKASEFDNPAILY--EEPSAKVKQAIERVKHIHS 325
L+ E+P K ++ERV I S
Sbjct: 915 ------------LWPQEKPCPKAWASLERVIEIQS 937
>gi|330928204|ref|XP_003302166.1| hypothetical protein PTT_13889 [Pyrenophora teres f. teres 0-1]
gi|311322639|gb|EFQ89752.1| hypothetical protein PTT_13889 [Pyrenophora teres f. teres 0-1]
Length = 884
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 143/280 (51%), Gaps = 21/280 (7%)
Query: 54 EGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMG 113
EG Y +T++ + AAG I +V R A+IRPPGHHA P G
Sbjct: 206 EGLDSIYFNHSTYECAKLAAGGAIEACKAVVEGHVRN----AIAIIRPPGHHAETDSPSG 261
Query: 114 FCVFGNVAIAARYAQRAH--GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS 169
FC+F NV IA R Q+A+ ++V I+D+DVHHGNG AFYDDP++ ++S H +DG+
Sbjct: 262 FCIFNNVPIATRVCQKAYPETCRKVLILDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGN 321
Query: 170 -YPG--TGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVS 225
YP G ++ G G GEG +N+P G GD F EV++P A F PDL+++S
Sbjct: 322 FYPNLPDGNLNYCGEGLGEGKNVNIPWAEHGMGDAEYLYAFQEVVMPIATEFDPDLVIIS 381
Query: 226 AGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADS 285
AG+DA D L T Y + + +LAK + V LEGGYNL S++ S
Sbjct: 382 AGFDAAEGDLLGGCFVTPACYGHMTHMLMRLAK----GKLVVCLEGGYNLRSIARSALAV 437
Query: 286 FRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
R + EP D P P +E VK HS
Sbjct: 438 TRVLMLEPPDRLHIDLPG-----PKDSAVHTVENVKREHS 472
>gi|403217120|emb|CCK71615.1| hypothetical protein KNAG_0H02010 [Kazachstania naganishii CBS
8797]
Length = 693
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++ VH++ ++ +E + + + E Y + + + G I
Sbjct: 111 ATSQEVLEVHSKEHLEFIESVTKMSHDELLKSTETGDSVYFNNDSSSSAKLSCGGAIEAC 170
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + FA++RPPGHH+ P+ GFC+F NVA+A++ R + ++R+ I
Sbjct: 171 KAVVEGRVKN----AFAVVRPPGHHSEPESAGGFCLFSNVAVASKNILRNYPESVRRIMI 226
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFYDD + ++S H+ YPGT G D+ G G GEG N+
Sbjct: 227 LDWDIHHGNGTQKAFYDDDRVLYISLHRFELGKYYPGTAQGHYDKTGEGKGEGFNCNITW 286
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P ++ F+PDL+++SAG+DA D + + Y +
Sbjct: 287 PVGGVGDAEYMWAFEQVVMPMSREFRPDLVIISAGFDAADGDTIGQCHVSPSCYGHMTHM 346
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA G+ CV LEGGYNL++++ S + +GEP + E +P ++P +
Sbjct: 347 LKSLAN---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEPPE--ELLDPV---KDPKPE 397
Query: 313 VKQAIERVKHIHS 325
+ I +V + S
Sbjct: 398 AIEIINKVIRLQS 410
>gi|410643523|ref|ZP_11354019.1| histone deacetylase family protein [Glaciecola chathamensis S18K6]
gi|410136933|dbj|GAC12206.1| histone deacetylase family protein [Glaciecola chathamensis S18K6]
Length = 305
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 150/276 (54%), Gaps = 18/276 (6%)
Query: 8 RGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
R II+ + + A+ + + H +AYV + ++ +QGI+ E + T + +
Sbjct: 38 RLDAIIDKQQATQATKEQLYLAHDKAYVDSVFASV---PEQGIV--ELAPDTQLGPRSLE 92
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAGA + VD V K + F +RPPGHHA MGFC F N+A+AA YA
Sbjct: 93 AALYAAGANVMAVDLVMQGKAQQ----AFCAVRPPGHHAEYAKAMGFCFFNNIAVAAHYA 148
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+GL+R+ IIDFDVHHGNGT + F+DD + F S+ + +P G G
Sbjct: 149 MAQYGLERIAIIDFDVHHGNGTENIFFDDERVLFCSSFESPFFP-------YNMGPGNEH 201
Query: 188 TLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
LNLP+P G+ GD M+ + + +P F P LIL+SAG+D+H D + +
Sbjct: 202 ILNLPMPAGTYGDEFMQAI-GDKWLPKIDAFAPQLILISAGFDSHYEDDMGHFNLVETDF 260
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ L+A +K+LA C ++ V LEGGY LN+L SV
Sbjct: 261 HWLSAELKKLAVKHCDNKIVSTLEGGYALNALGRSV 296
>gi|320170511|gb|EFW47410.1| histone deacetylase [Capsaspora owczarzaki ATCC 30864]
Length = 1496
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/239 (41%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA+IRPPGHHA MGF F NV+IAA A+ AHG+KR+ I+D+D+HHGNGT + FY
Sbjct: 1215 GFAVIRPPGHHAEANEAMGFSFFNNVSIAAAAAK-AHGMKRILIVDWDIHHGNGTQNIFY 1273
Query: 155 DDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGS--GDTAMRTVFHEV 209
+DP + +LS H+ DG+ YP TG DE G G+G G +N+P G G+ F+ V
Sbjct: 1274 NDPSVLYLSLHRHDDGNFYPYTGDADECGAGEGVGKNVNIPWRGNGAMGNNEYLAAFYYV 1333
Query: 210 IVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFL 269
++P A++F P+L+ +SAG+DA D + + + T + + A +K+LA G + + L
Sbjct: 1334 VMPIARQFNPELVFISAGFDAAEGDLIGNYKVTPAGFARMTAWLKELA----GGKVILAL 1389
Query: 270 EGGYNLNSLSYSVADSFRAFLGE-----PSKASEFDNPAILYEEPSAKVKQAIERVKHI 323
EGGY+LNSLS R LGE P ++++D +PS+ ++RV +I
Sbjct: 1390 EGGYDLNSLSTCATACIRVLLGEQPPPIPPSSNQYDT--RNSNQPSSAAITLLKRVINI 1446
>gi|302817308|ref|XP_002990330.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
gi|300141892|gb|EFJ08599.1| hypothetical protein SELMODRAFT_131541 [Selaginella moellendorffii]
Length = 630
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 152/285 (53%), Gaps = 20/285 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRA--SQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
PA+ +++A+VH ++ + RA + L Y + + +L AAG+ +
Sbjct: 54 PATAEELATVHTERHIEKMSSVSSRAYGKEGRAALARRYNSIYFNDGSSESALLAAGSVV 113
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH----GL 133
L VA R + A++RPPGHHA MGFC+F NVA+AA+ G
Sbjct: 114 ELSLKVA----RGELASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGS 169
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPG--TGKIDEVGRGDGEGST 188
+V I+D+DVHHGNGT + F+ DP++ + S H+ DG YPG G D+VG G G G
Sbjct: 170 HKVLIVDWDVHHGNGTQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFN 229
Query: 189 LNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N+P P GG D V+ V++P A+ F PD++L+S G+D+ DPL + T Y
Sbjct: 230 INVPWPRGGYSDADYVAVWEHVLMPVAREFNPDIVLISGGFDSARGDPLGGCKLTPLGYS 289
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
++ + QLA G + V LEGGYNL S++ S + LG+
Sbjct: 290 IMTQELMQLA----GGKIVLALEGGYNLESIAESYLACVQVLLGD 330
>gi|56749066|sp|Q70I53.3|HDAH_ALCSD RecName: Full=Histone deacetylase-like amidohydrolase;
Short=HDAC-like amidohydrolase; Short=HDAH
gi|37496190|emb|CAE45336.1| histone deacetylase-like amidohydrolase [Alcaligenaceae bacterium
FB188]
Length = 369
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 147/279 (52%), Gaps = 12/279 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
DI H+ A++ + M R S G G T + + +AG + L VA
Sbjct: 71 DILRAHSAAHL----ENMKRVSNLPTGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVA 126
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ G+AL+ PPGHHA MGFC+F N ++AA YA+ G++RV I+D+DVH
Sbjct: 127 TGELSA----GYALVNPPGHHAPHNAAMGFCIFNNTSVAAGYARAVLGMERVAILDWDVH 182
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HGNGT D +++DP + +S HQ + P +G E G G+G G +N+PLP GSG+ A
Sbjct: 183 HGNGTQDIWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVPLPPGSGNAAYL 242
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+V++ + ++P LI+V +G+DA +LDPLA + T + +A A D+C
Sbjct: 243 HAMDQVVLHALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDG 302
Query: 264 RCVFFLEGGYNLNSLSY---SVADSFRAFLGEPSKASEF 299
R VF EGGY+ + L + +V + P EF
Sbjct: 303 RIVFVQEGGYSPHYLPFCGLAVIEELTGVRSLPDPYHEF 341
>gi|353240903|emb|CCA72749.1| related to HDA1-histone deacetylase A [Piriformospora indica DSM
11827]
Length = 698
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 144/281 (51%), Gaps = 15/281 (5%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAMDRASQ---QGIILIEGSGPTYATATTFQESLAAAG 74
F+P + VH+ + + +E+ + + + EG + ATT L+ G
Sbjct: 97 FNPVLRREALLVHSEDHWNKVEQIAQMTRENILESVAYYEGLSLYVSPATTHAAKLSCGG 156
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
I +VA+ R FA++RPPGHHA P MGFC F N A+AAR Q K
Sbjct: 157 V-IEACRAVASGTIRN----CFAIVRPPGHHAEPDEHMGFCFFNNCAVAARAMQVERKAK 211
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGT--GKIDEVGRGDGEGSTLNLP 192
+V I+D+DVHHGNGT AF DDP + ++S H+ YPG G + G G G G ++N+
Sbjct: 212 KVLILDWDVHHGNGTQKAFLDDPTVLYISLHRFDIYPGGQFGAVTSCGEGPGLGYSVNIA 271
Query: 193 LPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PGG GD F +V++P A F PDL++VSAG+DA D L T Y A
Sbjct: 272 WPGGGMGDADYLYAFQKVVMPIAVEFAPDLVIVSAGFDAARGDDLGECDVTPAGY----A 327
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
++ + L + V LEGGYNL+S+ S R +GE
Sbjct: 328 HMTHMLSSLANGKLVVALEGGYNLDSIRNSAVAVMRVLMGE 368
>gi|410721921|ref|ZP_11361243.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanobacterium sp. Maddingley MBC34]
gi|410598039|gb|EKQ52631.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methanobacterium sp. Maddingley MBC34]
Length = 342
Score = 171 bits (433), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 159/303 (52%), Gaps = 19/303 (6%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
+PAS DD+ VH Y+ L+ + S G + + T+A+ +++ + AAG I
Sbjct: 47 TPASDDDLLRVHTTPYLKHLKNFAE--SGGGYLDFD----TFASPQSYEIAKLAAGGAIT 100
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
V + +++ RPPGHHA MGFC+ N+A+A Y + H L++ I
Sbjct: 101 ASRLVFDHDD-----FAYSMARPPGHHATTDSAMGFCLINNLAVALEYMREKHSLRKFLI 155
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGSTLNLPLPGG 196
+DFD H+GNGT + FY DP + ++S HQD +PG G I+E G G G+G LN+P+ G
Sbjct: 156 LDFDAHYGNGTAEIFYQDPHVLYISIHQDPHTIFPGKGFIEETGSGKGKGCNLNIPMSPG 215
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
S + + ++I P ++FK D + G+D H DPL+SLQ Y +A +++L
Sbjct: 216 SATSDYIYILEKIIEPVLRKFKADFYFLDVGFDGHREDPLSSLQLDDDFYPWIACYMQKL 275
Query: 257 AKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA-ILYEEPSAKVKQ 315
+ V LEGGY+ N+++ S + + + ++ P ++ ++ + ++ +
Sbjct: 276 T-----PKMVLILEGGYSKNAMARSNRKMIKVLNDKSTHEDQWRPPGKLMVKDETKRIFK 330
Query: 316 AIE 318
I+
Sbjct: 331 TIQ 333
>gi|74195299|dbj|BAE28372.1| unnamed protein product [Mus musculus]
Length = 1009
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L ++ + EG+ Y +TF + A GA
Sbjct: 529 PALDSELLTCHSAEYVEHLRTTEKMKTRD--LHREGANFDSIYICPSTFACAKLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL +L+ V+ S LG+P E
Sbjct: 367 HLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLE 410
>gi|416410982|ref|ZP_11688682.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 0003]
gi|357260381|gb|EHJ09808.1| Histone deacetylase superfamily [Crocosphaera watsonii WH 0003]
Length = 315
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/263 (38%), Positives = 149/263 (56%), Gaps = 19/263 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I + H Y+ +E A+ G +L E T + ++Q +L A A + +D+V
Sbjct: 70 IRNSHINEYIQRVEAI---ATNGGGLLDED---TVISPQSYQVALLAVNAWLDGLDTVTQ 123
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
++ + F L RPPGHHA+ K MGFC+F N AIAA YA + G +RV I+D+DVHH
Sbjct: 124 TQKQ-----AFVLSRPPGHHAVQKTGMGFCLFSNAAIAANYALQCKGAQRVAILDWDVHH 178
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D+P+I + S HQ +YPGTG+ E G+ D + LN+P+ GS + +
Sbjct: 179 GNGTQAIVEDNPNIAYCSLHQFPAYPGTGRASETGKYD---NILNIPMAPGSDLKSYQLA 235
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F + ++P FK DL++VSAGYDA+ DPLAS+ Y + + + S
Sbjct: 236 FSDQVIPFLAAFKGDLLIVSAGYDANQADPLASINLKPNDYAVFTQQLLTIT-----SSI 290
Query: 266 VFFLEGGYNLNSLSYSVADSFRA 288
+F LEGGY+L++LS SV + +A
Sbjct: 291 LFGLEGGYDLSALSDSVLATIQA 313
>gi|332306071|ref|YP_004433922.1| histone deacetylase superfamily protein [Glaciecola sp.
4H-3-7+YE-5]
gi|332173400|gb|AEE22654.1| histone deacetylase superfamily [Glaciecola sp. 4H-3-7+YE-5]
Length = 301
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 148/276 (53%), Gaps = 18/276 (6%)
Query: 8 RGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
R II+ + + A+ + + H +AYV + +QGI+ E + T + +
Sbjct: 34 RLDAIIDKQQATQATKEQLYLAHDKAYV---DSVFASVPEQGIV--ELAPDTQLGPRSLE 88
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAGA + VD V K + F +RPPGHHA MGFC F N+A+AA YA
Sbjct: 89 AALYAAGANVMAVDLVMQGKAQQ----AFCAVRPPGHHAEYAKAMGFCFFNNIAVAAHYA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+GL+R+ IIDFDVHHGNGT + F+DD + F S+ + +P G G
Sbjct: 145 MAQYGLERIAIIDFDVHHGNGTENIFFDDERVLFCSSFESPFFP-------YNMGPGNEH 197
Query: 188 TLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
LNLP+P G+ GD M+ + + +P F P LIL+SAG+D+H D + +
Sbjct: 198 ILNLPMPAGTYGDEFMQAI-GDKWLPKIDAFAPQLILISAGFDSHYEDDMGHFNLVETDF 256
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ L+A +K+LA C ++ V LEGGY LN+L SV
Sbjct: 257 HWLSAELKKLAVKHCDNKIVATLEGGYALNALGRSV 292
>gi|193885224|pdb|2VQO|A Chain A, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Muation Bound To A
Trifluoromethylketone Inhbitor
gi|193885225|pdb|2VQO|B Chain B, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Muation Bound To A
Trifluoromethylketone Inhbitor
gi|194368578|pdb|2VQV|A Chain A, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Mutation Bound To A Hydroxamic Acid
Inhibitor
gi|194368579|pdb|2VQV|B Chain B, Structure Of Hdac4 Catalytic Domain With A
Gain-Of-Function Mutation Bound To A Hydroxamic Acid
Inhibitor
Length = 413
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 130 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 185
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 186 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 245
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 246 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 304
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGGY+L ++ + A LG +E D
Sbjct: 305 SARCFGYLTKQLMGLA----GGRIVLALEGGYDLTAICDASEACVSALLG-----NELDP 355
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 356 LPEKVLQQRPNANAVRSMEKVMEIHS 381
>gi|27370650|gb|AAH41105.1| Hdac6 protein [Mus musculus]
Length = 1152
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L ++ + EG+ Y +TF + A GA
Sbjct: 532 PALDSELLTCHSAEYVEHLRTTEKMKTRD--LHREGANFDSIYICPSTFACAKLATGAAC 589
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 590 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 645
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 646 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 705
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 706 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 761
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 762 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 804
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 147/284 (51%), Gaps = 11/284 (3%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP SLQ A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDP-KSLQGEMAATPAGFAHLT 369
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL +L+ V+ S LG+P E
Sbjct: 370 HLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLE 413
>gi|158521985|ref|YP_001529855.1| histone deacetylase superfamily protein [Desulfococcus oleovorans
Hxd3]
gi|158510811|gb|ABW67778.1| histone deacetylase superfamily [Desulfococcus oleovorans Hxd3]
Length = 345
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 147/255 (57%), Gaps = 11/255 (4%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA++D + VH +V K + + ++ I + P + ++ + AAGA +
Sbjct: 51 PATLDQLELVHTPGHV----KKILKTAEHKITSMAPDTPV--SGHSYLAAWLAAGACMQG 104
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
VD + + R F+L+RPPGHHA+P GFC+ N+AIAARYA+ + L+R+ I+
Sbjct: 105 VDLLLSGACRA----FFSLVRPPGHHALPDRATGFCLLNNLAIAARYARMRYNLERILIV 160
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
D+DVHHGNG +D FY +P +F++S+H +P +G+ + G G G TLN+PL GD
Sbjct: 161 DWDVHHGNGIHDIFYREPGVFYVSSHDLMLFPYSGEAGDTGEAGGRGFTLNMPLSRSFGD 220
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
M ++ V+ P + + P +++++AG+DAH DPL ++ Y++LA + +LA D
Sbjct: 221 GDMAYIYRTVLTPVFRWYTPSMVMIAAGFDAHADDPLGRSAWSENAYFLLARLVCELA-D 279
Query: 260 LCGSRCVFFLEGGYN 274
+ LEGGY+
Sbjct: 280 ADHVPLLLSLEGGYD 294
>gi|195927326|pdb|2VQW|G Chain G, Structure Of Inhibitor-Free Hdac4 Catalytic Domain (With
Gain-Of-Function Mutation His332tyr)
Length = 413
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 130 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 185
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 186 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 245
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 246 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 304
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGGY+L ++ + A LG +E D
Sbjct: 305 SARCFGYLTKQLMGLA----GGRIVLALEGGYDLTAICDASEACVSALLG-----NELDP 355
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 356 LPEKVLQQRPNANAVRSMEKVMEIHS 381
>gi|348523309|ref|XP_003449166.1| PREDICTED: histone deacetylase 7-like [Oreochromis niloticus]
Length = 962
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 21/275 (7%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
+ + T S AAG+ + L VA + + GFA++RPPGHHA P PMGFC F +
Sbjct: 641 WNESHTSTASRLAAGSVVELAFRVAKGELKN----GFAVVRPPGHHADPSNPMGFCYFNS 696
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKI 176
VAIAA+ Q + ++ I+D+DVHHGNGT + FY+DP + ++S H+ DG+ +PG+G
Sbjct: 697 VAIAAKQLQHKLSVSKILIVDWDVHHGNGTEEVFYNDPSVLYISLHRYDDGNFFPGSGSP 756
Query: 177 DEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
EVG G GEG +N+ GG GD F V++P AQ F PD++LVSAG+DA
Sbjct: 757 AEVGSGAGEGFNVNVAWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDAAE 816
Query: 233 LD--PLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ PL + + + L + LA G R V LEGG++L ++ + + L
Sbjct: 817 GNPAPLGGYKVSAKCFGFLTRQLMSLA----GGRLVLALEGGHDLTAICDASEACVSSLL 872
Query: 291 GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
G E +L ++P+A ++++ V I S
Sbjct: 873 GIQEPLPE----DVLLQKPNANAVRSLQTVIQIQS 903
>gi|430762175|ref|YP_007218032.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Thioalkalivibrio nitratireducens DSM 14787]
gi|430011799|gb|AGA34551.1| Deacetylase, including histone deacetylase and acetoin utilization
protein [Thioalkalivibrio nitratireducens DSM 14787]
Length = 309
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 139/269 (51%), Gaps = 13/269 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS + + VH+ Y+ L + A G G TY + + AAGA + V
Sbjct: 51 ASREQLLRVHSPEYLDALAEG---APGPGEWTTLDGGDTYFGEHSLDAAHHAAGAVVLAV 107
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A+ F +RPPGHHA MGFCVF NVA+ A +A HGL RV I D
Sbjct: 108 DLVLANSTH----TAFCSVRPPGHHAGADYGMGFCVFNNVAVGAAHAMEGHGLSRVAIAD 163
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D F D+P + F S+ Q YP +G D V LNLPLP G+
Sbjct: 164 FDVHHGNGTEDIFRDEPRVLFCSSFQHPFYPHSGA-DTV-----SDHILNLPLPAGTDGA 217
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
A+R + +P + F+P+LILVSAG+D H+ D LA + Y L + +AK
Sbjct: 218 ALRAAVEQHWLPALEAFRPELILVSAGFDGHLEDDLAGFRLVESDYAWLTGALYDIAKRH 277
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
C R V LEGGYNL++L SVA +
Sbjct: 278 CDGRLVSVLEGGYNLSALGRSVAAHLKVL 306
>gi|432110144|gb|ELK33921.1| Histone deacetylase 6 [Myotis davidii]
Length = 1150
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 154/294 (52%), Gaps = 17/294 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIA 78
PA+ ++ + H+ YV+ L +A ++ + + S Y +TF + A GA
Sbjct: 534 PATDAELLTCHSAEYVARL-RATEKMRTRELYRESASFDSIYICPSTFASAQLATGATCC 592
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RVF 137
LV++V A + G AL+RPPGHHA GFC F +VA+AAR+AQ G R+
Sbjct: 593 LVEAVLAGEVLN----GVALVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHPLRIL 648
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYP--GTGKIDEVGRGDGEGSTLNLP 192
I+D+DVHHGNGT F DDP + ++S H+ +P G +VGR G G T+N+
Sbjct: 649 IVDWDVHHGNGTQHIFEDDPSVLYISLHRYDYGTFFPMGDEGAPSQVGRAAGTGFTVNVA 708
Query: 193 LPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
G GD+ +H +++P A F P+L+LVSAG+DA DPL + Y A
Sbjct: 709 WNGPRMGDSEYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCHLSPEGY----A 764
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAIL 305
++ L L R + LEGGYNL S+S S+A R LG+P P +L
Sbjct: 765 HLTHLLMGLASGRIILILEGGYNLASISESMAACTRTLLGDPPPLLTLSRPPLL 818
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 148/284 (52%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 136 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYNCACLASGSVLRLV 195
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A++RPPGHHA G+C+F +VA+AARYAQ+ HG++RV I+D
Sbjct: 196 DAILGAEIRN----GMAIVRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHGIQRVLIVD 251
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYP--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H Q +P G G G+G T+N+P
Sbjct: 252 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 311
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F ++++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 312 VGMRDADYIAAFLQILLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 367
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
+ L G R + LEGGYNL SL+ V+ S LG+P E
Sbjct: 368 HMLMGLAGGRLLLSLEGGYNLRSLAEGVSASLHTLLGDPCPMLE 411
>gi|107103293|ref|ZP_01367211.1| hypothetical protein PaerPA_01004362 [Pseudomonas aeruginosa PACS2]
Length = 380
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 27/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D+V + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDAVLTGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG G +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYGGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN--------------LNSLSYSVADSFRAF--LGEPSK 295
++ A+ R V EGGY+ L+ + +V D R F L +P+
Sbjct: 292 MVRDAAERHADGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA 351
Query: 296 A 296
A
Sbjct: 352 A 352
>gi|341038789|gb|EGS23781.1| hypothetical protein CTHT_0004840 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 751
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 165/319 (51%), Gaps = 34/319 (10%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQ----GIILIEGSGPTYATATTFQESLAAAGA 75
PA+ ++I VH + +E+ +++Q+ I+ +G Y + T++ SL +AG
Sbjct: 147 PATKEEICMVHHPRHYLWVEELSRKSTQELRHLSAIMDQGRDSLYVGSMTYEASLISAGG 206
Query: 76 GIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG- 132
I SV KN FA+IRPPGHHA PMGFC+F NV IAA+ Q +
Sbjct: 207 AIETCKSVVTGVVKN------AFAIIRPPGHHAEYDQPMGFCLFNNVPIAAKICQADYPD 260
Query: 133 -LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--------GKIDEVG 180
+++ I+D+DVHHGNG + FYDDP+I ++S H ++G YPG G I+ G
Sbjct: 261 LCRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFYPGKPDNPMTPDGGIEHCG 320
Query: 181 RGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASL 239
G G G +N+ G GD F ++++P A F PDL+++SAG+DA D L +
Sbjct: 321 AGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDLVIISAGFDAAAGDELGAC 380
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
T Y A++ + L G + LEGGY+L ++S S + +GEP E
Sbjct: 381 FVTPACY----AHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVAQTLMGEPPPKMEI 436
Query: 300 DNPAILYEEPSAKVKQAIE 318
P I E +AKV ++
Sbjct: 437 --PKISRE--AAKVLAKVQ 451
>gi|126730375|ref|ZP_01746186.1| histone deacetylase family protein [Sagittula stellata E-37]
gi|126709108|gb|EBA08163.1| histone deacetylase family protein [Sagittula stellata E-37]
Length = 308
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 150/261 (57%), Gaps = 12/261 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH + Y+ + A QGI ++ T+ + + + + AAGAGI V
Sbjct: 47 ATDEELRRVHPQRYIDRIVAA---EPGQGIAQLDAD--TWMSRGSVRAARLAAGAGIQAV 101
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V + + F RPPGHHA + PMGFC+FG A+AA++A HGL+RV ++D
Sbjct: 102 DMVMGGEAQN----VFCATRPPGHHAETETPMGFCLFGTAALAAKHALDVHGLERVAVVD 157
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT D +++ F+++ Q +PGTG+ +E G D + +NLPLP SG
Sbjct: 158 FDVHHGNGTQDLLWNEARSLFITSQQMPLWPGTGRPEERGAHD---NVMNLPLPPESGGA 214
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
MR + P + F P+L+++SAG+DAH DPLA+L +T + + + +A +
Sbjct: 215 EMRARYENDAFPRLRDFAPELLIISAGFDAHQDDPLANLNWTVDDFRWVTRALCDIAAET 274
Query: 261 CGSRCVFFLEGGYNLNSLSYS 281
G R V LEGGY+L LS S
Sbjct: 275 AGGRVVSTLEGGYDLAGLSAS 295
>gi|55378980|ref|YP_136830.1| acetoin utilization protein [Haloarcula marismortui ATCC 43049]
gi|55231705|gb|AAV47124.1| acetoin utilization protein [Haloarcula marismortui ATCC 43049]
Length = 335
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 144/286 (50%), Gaps = 13/286 (4%)
Query: 6 EFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
E G E + N A +D + +VH Y++ + D T A T
Sbjct: 34 ENHGVEYVAADN---ADLDLVRAVHDTDYIAEFREFCDDGGGNW------DADTVAVEET 84
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
+ +LA+AG + ++ D P F+L RPPGHHA+ MGFC F N A A
Sbjct: 85 WDAALASAGLAVWAAEAALDGNTGRDTP--FSLGRPPGHHAVGDDAMGFC-FINNAAVAA 141
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGE 185
A RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG I E G GD +
Sbjct: 142 QAALEADADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHEDGLYPGTGDISETGTGDAD 201
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G+ LN+ G+ E I P + + PDL+L+SAG+DAH DP++ ++ +T
Sbjct: 202 GTNLNVKYKPGADTADYLAAIDECIAPAIRDYDPDLLLISAGFDAHEHDPISRMRVSTEG 261
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
Y + ++ L D C + LEGGY L++LS SV F G
Sbjct: 262 YGAMTDRMRSL-TDACDAALGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|372268913|ref|ZP_09504961.1| histone deacetylase [Alteromonas sp. S89]
Length = 292
Score = 171 bits (432), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 148/273 (54%), Gaps = 19/273 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ I VH YV E RA +G +++ T + T +L AAG+G+ V
Sbjct: 36 ATRRHIERVHTPEYV---ESIFARAPSEGFAVLDED--TRMNSHTLAAALHAAGSGVDAV 90
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V R + GF +RPPGHHA MGFC+F N+AIAA +A++ HGL+RV I+D
Sbjct: 91 DRVM----RGEISSGFCAVRPPGHHAERAKAMGFCLFNNIAIAAEHARKQHGLERVAILD 146
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP--GTGKIDEVGRGDGEGSTLNLPLPGGSG 198
FDVHHGNGT D F S+ Q YP GTG++ + + +N PL G+G
Sbjct: 147 FDVHHGNGTEDFAAGREGYLFCSSFQSPYYPFSGTGELPD--------NVVNSPLEAGAG 198
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
A+R + E +P ++F+P ++ +SAG+D H+ D +A L+F Y + +++ A
Sbjct: 199 GDALREIVTEQWLPALEKFRPQMLFISAGFDGHIEDAMAQLRFKEDDYLWVTERLREYAD 258
Query: 259 DLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ C R V LEGGY L++L SV + LG
Sbjct: 259 ENCQGRIVSALEGGYALSALGRSVVAHLKGLLG 291
>gi|340030109|ref|ZP_08666172.1| histone deacetylase superfamily protein [Paracoccus sp. TRP]
Length = 319
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 108/268 (40%), Positives = 143/268 (53%), Gaps = 17/268 (6%)
Query: 16 KNFSPASVD-DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAG 74
+ +P D DI H Y L A + +G +++ TY + + A G
Sbjct: 54 RREAPEGTDQDILRAHPAEY---LALAQRKVPAEGWTMLDSD--TYLAPDSLTAARHAVG 108
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
A VD+V A + P F +RPPGHHA + MGFC+F +VAIAA A HGL
Sbjct: 109 GVCAAVDAVLAGEA----PNAFVAMRPPGHHAEREKAMGFCIFSSVAIAALRALDHHGLD 164
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL- 193
RV ++DFDVHHGNGT D + FF STHQ YPGTG E G G LN+PL
Sbjct: 165 RVAVLDFDVHHGNGTQDVLWHQRRAFFASTHQMPLYPGTGAASERG---AHGQILNVPLA 221
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
PG +GD A R + E I CA+ ++P L+L+SAG+DAH DPLA+L ++ + + I
Sbjct: 222 PGSAGDEA-RAAW-EQICDCAEAWRPQLVLISAGFDAHADDPLAALMWSEADFTAITRMI 279
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A C + V LEGGY+L +L S
Sbjct: 280 CDTAA-TCSAPVVSALEGGYDLAALGRS 306
>gi|6978316|gb|AAD09835.2| histone deacetylase mHDA2 [Mus musculus]
Length = 1149
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L ++ + EG+ Y +TF + A GA
Sbjct: 529 PALGSELLTCHSAEYVEHLRTTEKMKTRD--LHREGANFDSIYICPSTFACAKLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL +L+ ++ S LG+P E
Sbjct: 367 HLLMGLAGGKLILSLEGGYNLRALAKGISASLHTLLGDPCPMLE 410
>gi|87310780|ref|ZP_01092907.1| acetoin utilization protein [Blastopirellula marina DSM 3645]
gi|87286537|gb|EAQ78444.1| acetoin utilization protein [Blastopirellula marina DSM 3645]
Length = 311
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 138/277 (49%), Gaps = 18/277 (6%)
Query: 17 NFSPASVDDIASVHARAYVSGLE----KAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++ A+ DI +H A + +E K R + ++ S +Y AT A
Sbjct: 45 QWAHATAQDIQLIHTAAMRTSVEGFSLKGGGRIEEDTVV----SHDSYHVATL------A 94
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
GA + V A D L+RPPGHHA P PMGFC+F +VAIAA+YA
Sbjct: 95 VGAAMDATRRVLAG----DSSNALCLVRPPGHHATPTMPMGFCLFNSVAIAAQYALSKLD 150
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV I+D+DVHHGNGT DAF++ FLS H+ YPGTG E+G+ G G T NLP
Sbjct: 151 LDRVLIVDWDVHHGNGTQDAFWESERAAFLSIHRYPFYPGTGDTLEIGQRAGLGYTRNLP 210
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L G + F + + +P LIL+SAG+DAH DP+ SL T Y L
Sbjct: 211 LKYGVSRRDFISQFERALEDITAKVRPQLILLSAGFDAHAADPVGSLGLETEDYDELTQI 270
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
+ A G + V LEGGYN L+ SV R
Sbjct: 271 VLDAASVYAGGKLVSILEGGYNPEKLAESVEVHLRKL 307
>gi|395537736|ref|XP_003770848.1| PREDICTED: histone deacetylase 10 [Sarcophilus harrisii]
Length = 825
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 166/318 (52%), Gaps = 34/318 (10%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +D+ VH+ YV+ ++ + +Q L + Y +TF + A GA + LV
Sbjct: 180 ATEEDLELVHSPEYVAVVKGTQTMSREQLHTLAQQYDAVYFHPSTFPCARMAVGATLQLV 239
Query: 81 DSVA--ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVAIAA +A+R HGL+R+ I
Sbjct: 240 DAVVTGAVGN------GMALVRPPGHHSQRDAANGFCVFNNVAIAAEHAKRRHGLQRILI 293
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGK--IDEVGRGDGEGSTLNLPL 193
+D+D+HHG G AF +DP + + S H+ +P + D VG+G G G T+N+P
Sbjct: 294 VDWDIHHGQGIQRAFENDPSVLYFSWHRYEHQSFWPRLRESDYDVVGQGPGRGFTVNVPW 353
Query: 194 PGGSGDTAMR-----TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
MR +VF V++P A F P+L+LVSAGYD+ + DP ++ T +
Sbjct: 354 ----NKVGMRNADYVSVFLHVLLPLAIEFDPELVLVSAGYDSGIGDPEGEMKATPECFAH 409
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L + LA+ R LEGGY L SL+ V + + LG+P PA+ E
Sbjct: 410 LTFLLLPLAR----GRLCAVLEGGYYLQSLAECVCLTLQTLLGDPV-------PALSGEP 458
Query: 309 -PSAKVKQAIERVKHIHS 325
P ++I+ V+ H+
Sbjct: 459 VPCLSALESIQNVRAAHA 476
>gi|194353997|ref|NP_034543.3| histone deacetylase 6 [Mus musculus]
gi|194353999|ref|NP_001123888.1| histone deacetylase 6 [Mus musculus]
gi|341941079|sp|Q9Z2V5.3|HDAC6_MOUSE RecName: Full=Histone deacetylase 6; Short=HD6; AltName:
Full=Histone deacetylase mHDA2
Length = 1149
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L ++ + EG+ Y +TF + A GA
Sbjct: 529 PALDSELLTCHSAEYVEHLRTTEKMKTRD--LHREGANFDSIYICPSTFACAKLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL +L+ V+ S LG+P E
Sbjct: 367 HLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLE 410
>gi|325294703|ref|YP_004281217.1| histone deacetylase superfamily protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065151|gb|ADY73158.1| histone deacetylase superfamily [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 301
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 142/261 (54%), Gaps = 16/261 (6%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
P S + + +VH++ Y+ + + R G TY + T+ ++ AAGA
Sbjct: 44 KPVSFESLEAVHSKNYIDSVRLSC-REYSPGFF----DPDTYYNSYTYNSAVFAAGAVEK 98
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
V+ + +K F +RPPGHHA MGFC+F NVAI A A G+K++FI
Sbjct: 99 GVELLLNNKYET----VFCAVRPPGHHAERDRAMGFCIFNNVAIGAVRALLL-GIKKIFI 153
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSG 198
+DFD HHGNGT FY +P +F+ STHQ YPGTG +E LN+P+ GSG
Sbjct: 154 VDFDAHHGNGTQHTFYINPKVFYFSTHQYPFYPGTGSKEE-----NNEHILNIPIQEGSG 208
Query: 199 DTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAK 258
DT + V+ E+ + FKP++ILVSAGYD H DPL++L+ T + I AK
Sbjct: 209 DTKYKEVYGEIYRKSIETFKPEIILVSAGYDLHKDDPLSNLEVTDKGVRFILEQILLSAK 268
Query: 259 DLCGSRCVFFLEGGYNLNSLS 279
+L +F LEGGYN ++L
Sbjct: 269 EL-SIPILFTLEGGYNFHALE 288
>gi|149017535|gb|EDL76539.1| rCG59247, isoform CRA_c [Rattus norvegicus]
Length = 666
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 110/292 (37%), Positives = 160/292 (54%), Gaps = 18/292 (6%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E + + AS +++ VH+ Y++ ++K ++ L + Y TF +
Sbjct: 45 ERCQCLSVCEASEEELGLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCAR 104
Query: 71 AAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
AAGA + LVD+V A N G AL+RPPGHH+ GFCVF NVAIAAR+A+
Sbjct: 105 LAAGAALRLVDAVLTGAVHN------GVALVRPPGHHSQRAAANGFCVFNNVAIAARHAK 158
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYP--GTGKIDEVGRGD 183
+ +GL+R+ I+D+DVHHG G F DDP + + S H+ +P D VGRG
Sbjct: 159 QKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRGR 218
Query: 184 GEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G+G T+NLP G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T
Sbjct: 219 GQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQAT 278
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ A++ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 279 PECF----AHLTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 326
>gi|74152172|dbj|BAE32376.1| unnamed protein product [Mus musculus]
Length = 1149
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L ++ + EG+ Y +TF + A GA
Sbjct: 529 PALDSELLTCHSAEYVEHLRTTEKMKTRD--LHREGANFDSIYICPSTFACAKLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL +L+ V+ S LG+P E
Sbjct: 367 HLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLE 410
>gi|375263659|ref|YP_005025889.1| histone deacetylase superfamily protein [Vibrio sp. EJY3]
gi|369844086|gb|AEX24914.1| histone deacetylase superfamily protein [Vibrio sp. EJY3]
Length = 367
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 137/255 (53%), Gaps = 11/255 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +D++ H + Y+ LE D+ + P A F + + G IA +
Sbjct: 66 ATHEDLSRFHTQTYLQELEAKSDQQFGDAGV----CAPFRQDA--FYIAKRSTGLAIATI 119
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+ V D + L RPPGHHA GFC+ GN+ IA + AQ +K+V +ID
Sbjct: 120 ERVLTG----DVDNAYCLTRPPGHHAQSHQGNGFCLLGNIPIAIKAAQAKGLVKKVAVID 175
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGD 199
+DVHHGNGT +AFY +P++ +S H + +YP +G I E G GDG G LN+PLP GSG
Sbjct: 176 WDVHHGNGTQEAFYSNPNVLTMSIHHENNYPVNSGAIAERGDGDGFGYNLNIPLPAGSGI 235
Query: 200 TAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKD 259
+ ++I P +RFKP+LI+++ G+DA +DPL + TY + I +LA
Sbjct: 236 GTYKATIEQIIEPAIRRFKPELIVIACGFDASAMDPLGCMILNAETYGWMTKRIMKLADS 295
Query: 260 LCGSRCVFFLEGGYN 274
+C + EGGY+
Sbjct: 296 VCDGKLAMIHEGGYS 310
>gi|428175094|gb|EKX43986.1| hypothetical protein GUITHDRAFT_157988 [Guillardia theta CCMP2712]
Length = 307
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 132/230 (57%), Gaps = 10/230 (4%)
Query: 59 TYATATTFQESLAAAGAGIAL--VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
T A T+ +A A +A V V R + G AL+RPPGHHA + MGFC
Sbjct: 73 TQIGADTYCNEFSALCARMATGTVAEVCRRVLRGEAANGAALVRPPGHHAEHETIMGFCF 132
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT 173
F VA+AA A+R GL+RV I+D+DVHHGNGT F+ DP + ++S H +DG+ YPGT
Sbjct: 133 FNYVAVAAEIAKREFGLQRVLILDWDVHHGNGTQSMFFKDPSVLYISLHRYEDGNFYPGT 192
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
G EVG G G G +N+P P GD F +++P A+ F P+L+LVSAG+DA
Sbjct: 193 GGAHEVGVGAGRGFNINIPWPHDEVGDAEYLMAFESIVMPVARSFNPELVLVSAGFDAAD 252
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
DPL T Y M+ ++ LA G + V LEGGYNL S++ S+
Sbjct: 253 GDPLGGCSVTPYGYAMMTNMLRGLA----GGKVVVALEGGYNLRSIANSM 298
>gi|164614597|gb|ABY64525.1| histone deacetylase 2 splice variant A [Tetrahymena thermophila]
Length = 664
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 23/287 (8%)
Query: 18 FSPASVDDIASVHARAYVSGLEKAM-DRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
PA + H Y+ +E ++ ++ I +++ TY ++ + G
Sbjct: 70 LKPAEKSIVKYAHDDNYIEFIEGMWPEKTKKKEIYMLD----TYFNQSSKDAAYLGVGGV 125
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHA-IPKGPMGFCVFGNVAIAARYAQRAHGLKR 135
I VD + + + + F +IRPPGHH+ K GFC F NVAIAA+Y Q+ HG+K+
Sbjct: 126 IESVDRIISKQWKN----AFCIIRPPGHHSGESKVCTGFCFFNNVAIAAKYLQKNHGVKK 181
Query: 136 VFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGSTLNLP 192
V I D+D+HHG+GT F DDP++ F+S H+ DGS YP +G + G G+G+G +N+P
Sbjct: 182 VLIFDWDIHHGDGTQHIFQDDPNVLFVSMHRHDDGSFYPQSGSVTNNGSGEGKGFKINIP 241
Query: 193 LPGGSGDTAMRT-------VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G A+ F + P Q F+P+ IL+SAG+D+ DPL + T
Sbjct: 242 WDIGYSQNALTAGTDEYIYAFERIAFPIIQEFQPEFILISAGFDSAEGDPLGQCKLTYEG 301
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
Y L + + G + LEGGYNL S+S++ R GE
Sbjct: 302 YAYLTRRLMDITN---GKNILVVLEGGYNLESISWAAESVLRTLTGE 345
>gi|47220230|emb|CAF98995.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1017
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 174/326 (53%), Gaps = 33/326 (10%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
AS++++ +VH+ A+V + L + D + +++ G + T + E ++ A
Sbjct: 647 ASLEELQTVHSEAHVLLYGTNPLRQKHDCSVSPMFVMLPCGGIGVDSDTIWNEVHSSTAA 706
Query: 76 GIA------LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A LV VA+ + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 707 RLAVGSVAELVFKVASGELKN----GFAVVRPPGHHAEESAPMGFCYFNSVAIAAKLLQQ 762
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
++++ I+D+DVHHGNGT AFY DP I ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 763 RLNVRKILIVDWDVHHGNGTQQAFYADPGILYISLHRYDDGNFFPGSGAPDEVGSGPGAG 822
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 823 FNVNMAFTGGLEPPMGDVEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGHA-SPLGGY 881
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ T + L + LA+ R V LEGG++L ++ + A LG E
Sbjct: 882 KLTAKCFGYLTRQLMALAE----GRLVLALEGGHDLTAICDASEACVSALLG---NELEP 934
Query: 300 DNPAILYEEPSAKVKQAIERVKHIHS 325
++ + P+A +++E+V HS
Sbjct: 935 IPDEVMRQRPNANAVRSMEKVVGAHS 960
>gi|432864418|ref|XP_004070312.1| PREDICTED: histone deacetylase 7-like [Oryzias latipes]
Length = 953
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 151/277 (54%), Gaps = 25/277 (9%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
+ + T S AAG+ + L VA KN GFA++RPPGHHA P PMGFC F
Sbjct: 632 WNESHTSTASRMAAGSVVELAFRVAKGELKN------GFAVVRPPGHHADPSNPMGFCYF 685
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTG 174
+VAIAA+ Q+ + ++ I+D+DVHHGNGT + FY+D + ++S H+ DG+ +PG+G
Sbjct: 686 NSVAIAAKQLQQKLSVSKILIVDWDVHHGNGTQEVFYNDRSVLYISLHRYDDGNFFPGSG 745
Query: 175 KIDEVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
EVG G GEG +NL GG GD F V++P AQ F PD++LVSAG+DA
Sbjct: 746 SPAEVGSGAGEGFNVNLAWTGGLDPPMGDAEYLAAFRSVVMPIAQEFSPDVVLVSAGFDA 805
Query: 231 HVLD--PLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRA 288
+ PL + + + L + LA G R + LEGG++L ++ + A
Sbjct: 806 AEGNPAPLGGYKVSAKCFGFLTHQLMSLA----GGRLILALEGGHDLTAICDASEACVSA 861
Query: 289 FLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
LG E +L ++P+A ++++ V I S
Sbjct: 862 LLGMQDSMPE----DVLLQKPNANAVRSLQTVIQIQS 894
>gi|387893899|ref|YP_006324196.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
gi|387164014|gb|AFJ59213.1| histone deacetylase family protein [Pseudomonas fluorescens A506]
Length = 370
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 167/317 (52%), Gaps = 17/317 (5%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT-TFQE 68
S ++L + PAS +D+ VH+RAY+ + D + GP +F+
Sbjct: 59 SRQLQLHSAPPASEEDLLRVHSRAYLQRFKALSDAGGGE-------LGPQAPIGPGSFEI 111
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ +AG +A VD V + ++L RPPGHH + MGFC N+AIA A+
Sbjct: 112 AQLSAGLTLAAVDMVLKGQAHN----AYSLSRPPGHHCLADSAMGFCFLANIAIAIEAAK 167
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGS 187
+GL +V +ID+DVHHGNGT F + D+ +S HQDG Y PG + GRG G G+
Sbjct: 168 ARNGLGKVAVIDWDVHHGNGTQSIFEERADVLTVSLHQDGCYPPGYSGEQDRGRGAGVGA 227
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N+PLP GSG ++VP +RF+P+LI+V+ GYDA+ +DPLA + + ++
Sbjct: 228 NINIPLPPGSGHATYLHAMERIVVPALERFEPELIIVACGYDANAVDPLARMLLHSESFR 287
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
+L ++ A+ LC R V EGGY+ + + + G + + + +
Sbjct: 288 LLTRALRLAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRTAVQDPMLEFVQLQ 347
Query: 308 EPSAKVK----QAIERV 320
+PSA+++ Q +ER+
Sbjct: 348 QPSAQLQGFQAQWVERL 364
>gi|148557245|ref|YP_001264827.1| histone deacetylase superfamily protein [Sphingomonas wittichii
RW1]
gi|148502435|gb|ABQ70689.1| histone deacetylase superfamily [Sphingomonas wittichii RW1]
Length = 373
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 146/279 (52%), Gaps = 18/279 (6%)
Query: 2 ELTSEFRGSEIIE---LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGP 58
L S + S +I+ + + P S +D+ VH Y+ + D G
Sbjct: 46 RLLSLVQASGLIDHLAVASADPVSREDMLRVHTVDYIDRFKATSDAGG--------GDLG 97
Query: 59 TYATATTFQESLAAAGAGIA--LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
+A + +AA AG+A VD V + ++R +AL RP GHH +P G MGFC+
Sbjct: 98 GFAPFSQGGYEIAALSAGLAKRAVDDVLSGRHRN----AYALCRPAGHHCLPDGSMGFCL 153
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYP-GTGK 175
N+ IA A+ HG RV ++D+DVHHGNGT +Y D +S HQ+ +P G
Sbjct: 154 LCNIPIAIEAARARHGALRVAVVDWDVHHGNGTQAVYYGRDDTLTISLHQENCFPPGYSG 213
Query: 176 IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDP 235
++ G G G G LN+PLP G+GD A R +++P +RF+PDLI+V++G DA DP
Sbjct: 214 EEDRGEGRGAGCNLNIPLPPGAGDEAYRHALRALVIPAIERFRPDLIVVASGLDAGAADP 273
Query: 236 LASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
LA + + T+ + + LA LCG + V EGGY+
Sbjct: 274 LARMLVHSETFRAMTGELMALADRLCGGKLVVVHEGGYS 312
>gi|399908199|ref|ZP_10776751.1| acetylpolyamine aminohydrolase [Halomonas sp. KM-1]
Length = 370
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/266 (34%), Positives = 141/266 (53%), Gaps = 11/266 (4%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
+ ++L+ AS +D+ +H Y++ + D G +A
Sbjct: 59 TRALDLRTAPMASEEDLLRIHPAEYLARFKALSDAGG--------GELGDHAPIGPGSYE 110
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A AG+A+ A+ R + ++L RPPGHH +P MGFC+ N+ IA A+
Sbjct: 111 IARVSAGLAI--EAVATVLRGEADNAYSLSRPPGHHCLPDRAMGFCMLANIPIAIEAARA 168
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGST 188
GL RV +ID+DVHHGNGT +Y D+ +S HQ+G + PG G D+ G G G G
Sbjct: 169 RSGLSRVAVIDWDVHHGNGTQHVYYQRDDVLTISLHQEGCFPPGYGGADDRGSGTGLGYN 228
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+PL G G+ A + ++VP +RF P+LI+V+ G+DA+ DPLA + T+ Y
Sbjct: 229 LNIPLLPGGGEDAYQHAMQRLVVPALERFAPELIIVACGFDANGFDPLARMLLTSECYRE 288
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYN 274
+ ++Q A+ LC R V EGGY+
Sbjct: 289 MTRTLRQAAERLCDGRLVMVHEGGYS 314
>gi|47220975|emb|CAF98204.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1155
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 117/349 (33%), Positives = 178/349 (51%), Gaps = 54/349 (15%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
A+++++ +VH+ A+V + L + +D + + + G + T + E +++ A
Sbjct: 757 ATLEELQTVHSEAHVLLYGTNPLRQKLDCSITPMFVRLPCGGIGVDSDTIWNEVHSSSAA 816
Query: 76 GIA------LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 817 RLAVGSVAELVFKVATRELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQ 872
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFYDDP + +LS H+ DG+ +PG+G DEVG G G G
Sbjct: 873 RLNINKILIVDWDVHHGNGTQQAFYDDPSVLYLSIHRYDDGNFFPGSGAPDEVGSGPGVG 932
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 933 FNVNVAFTGGLEPPMGDAEYLAAFRSVVMPIANEFAPDIVLVSSGFDAVEGHP-PPLGGY 991
Query: 240 QFTTGTYYM------------------LAANIKQLAKD---LCGSRCVFFLEGGYNLNSL 278
T Y L A L + L G R V LEGG++L ++
Sbjct: 992 TLTAKCEYKNGKCAFRLKHRPDRTSGPLFAGFGYLTRQLMTLAGGRLVLALEGGHDLTAI 1051
Query: 279 SYSVADSFRAFLGEPSKASEFD--NPAILYEEPSAKVKQAIERVKHIHS 325
+ A LG+ E D ++L + P+A +++E+V IHS
Sbjct: 1052 CDASEACLAALLGQ-----ELDPLPKSVLEQRPNANAVRSLEKVLEIHS 1095
>gi|432107235|gb|ELK32649.1| Histone deacetylase 4 [Myotis davidii]
Length = 1039
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AAR Q+
Sbjct: 729 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAARLLQQRL 784
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ + I+D+DVHHGNGT AFY DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 785 NVSKTLIVDWDVHHGNGTQQAFYSDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFN 844
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVSAG+DA H PL
Sbjct: 845 VNMAFTGGLDPPMGDAEYLAAFRMVVMPIANEFAPDVVLVSAGFDAVEGHP-TPLGGYNL 903
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGG++L ++ + A LG +E D
Sbjct: 904 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 954
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 955 LPEKVLQQRPNANAVRSMEKVIEIHS 980
>gi|424901688|ref|ZP_18325204.1| histone deacetylase [Burkholderia thailandensis MSMB43]
gi|390932063|gb|EIP89463.1| histone deacetylase [Burkholderia thailandensis MSMB43]
Length = 370
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+ALIRP GHHA MG+C + NVAIAAR+AQ HG++RV I+D+DVHHGNGT FYD
Sbjct: 133 YALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAVHGVERVAIVDWDVHHGNGTQQVFYD 192
Query: 156 DPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DP + F+S H+ ++P G+ E G G G G N+PLP G+GD F E+++P
Sbjct: 193 DPSVLFVSLHEAANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYAHAFDELVLPLV 252
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ F P LILVSAG DA+ DPL ++ + +A ++Q A C R V EGGY+
Sbjct: 253 EAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGSTCDGRIVMLQEGGYS 312
Query: 275 LNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEP 309
L L + +G + FD+P + P
Sbjct: 313 LPYLPIATLGVLEGLVG---WNAPFDDPHQFAQHP 344
>gi|351705825|gb|EHB08744.1| Histone deacetylase 4, partial [Heterocephalus glaber]
Length = 1077
Score = 170 bits (431), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 144/265 (54%), Gaps = 26/265 (9%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G + LV VA KN GFA++RPPGHHA PMGFC F +VA+AAR Q+
Sbjct: 767 AVGCVVELVFKVATGELKN------GFAVVRPPGHHAEESTPMGFCYFNSVAVAARLLQQ 820
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ R+ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 821 RLSVSRILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVG 880
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GDT F V++P A F PD++LVS+G+DA H PL
Sbjct: 881 FNVNMAFTGGLDPPMGDTEYLAAFRTVVMPIANEFAPDMVLVSSGFDAVEGHP-TPLGGY 939
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
+ + L + LA G R V LEGG++L ++ + A LG E
Sbjct: 940 NLSARCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG---NELEP 992
Query: 300 DNPAILYEEPSAKVKQAIERVKHIH 324
+L + P+A +++E+V IH
Sbjct: 993 LPEKVLQQRPNANAVRSMEKVVEIH 1017
>gi|405123003|gb|AFR97768.1| histone deacetylase clr3 [Cryptococcus neoformans var. grubii H99]
Length = 731
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 143/284 (50%), Gaps = 16/284 (5%)
Query: 17 NFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIE--GSGPTYATATTFQESLAAAG 74
+F D + VH ++ + QQ + E Y T + +AG
Sbjct: 108 DFEEVKFDQVLLVHGEEMWDKVQATELLSDQQIQAMKEYYDQLSLYVCRETAHCARLSAG 167
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
I SV ++ R FA++RPPGHHA P MGFC F NVA+A R QR K
Sbjct: 168 GVIQACRSVCKNEVRN----AFAIVRPPGHHAEPNEHMGFCFFNNVAVATREMQREGLAK 223
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--GKIDEVGRGDGEGSTL 189
+V I+D+DVHHGNGT AF+ D D+ ++S H+ YP + G ++ VG G+G G ++
Sbjct: 224 KVLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNSDFGSLNMVGDGEGVGKSV 283
Query: 190 NLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N+P PG G GD F +I+P A F PDL+++SAG+DA D L T Y
Sbjct: 284 NIPWPGPGFGDADYIYAFQRIIMPIAYEFNPDLVIISAGFDAADGDLLGQCHVTPAAY-- 341
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
++ + L G + V LEGGYNL ++S S R LGE
Sbjct: 342 --GHMTHMLSSLAGGKLVVALEGGYNLRAISDSALAVARVLLGE 383
>gi|410645160|ref|ZP_11355628.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
gi|410135393|dbj|GAC04027.1| histone deacetylase family protein [Glaciecola agarilytica NO2]
Length = 301
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 150/276 (54%), Gaps = 18/276 (6%)
Query: 8 RGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
R II+ + + A+ + + H +AYV + ++ +QGI+ E + T + +
Sbjct: 34 RLDAIIDKQQATQATKEQLYLAHDKAYVDSVFASV---PEQGIV--ELAPDTQLGPRSLE 88
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L AAGA + VD V K + F +RPPGHHA MGFC F N+A+AA YA
Sbjct: 89 AALYAAGANVMAVDLVMQGKAQQ----AFCAVRPPGHHAEYAKAMGFCFFNNIAVAAHYA 144
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
+GL+R+ +IDFDVHHGNGT + F+DD + F S+ + +P G G
Sbjct: 145 MAQYGLERIAVIDFDVHHGNGTENIFFDDERVLFCSSFESPFFP-------YNMGPGNEH 197
Query: 188 TLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
LNLP+P G+ GD M+ + + +P F P LIL+SAG+D+H D + +
Sbjct: 198 ILNLPMPAGTYGDEFMQAI-GDKWLPKIDAFAPQLILISAGFDSHYEDDMGHFNLVETDF 256
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSV 282
+ L+A +K+LA C ++ V LEGGY LN+L SV
Sbjct: 257 HWLSAELKKLAVKHCDNKIVATLEGGYALNALGRSV 292
>gi|423691683|ref|ZP_17666203.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
gi|387999968|gb|EIK61297.1| histone deacetylase family protein [Pseudomonas fluorescens SS101]
Length = 370
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 17/319 (5%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATAT-TFQE 68
S + L + PAS +D+ VH+RAY+ + D + GP +++
Sbjct: 59 SRHLHLHSAPPASEEDLLRVHSRAYLQRFKALSDAGGGE-------LGPQAPIGPGSYEI 111
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ +AG +A VD+V + ++L RPPGHH + MGFC N+AIA A+
Sbjct: 112 AQLSAGLTLAAVDAVLKGQAHN----AYSLSRPPGHHCLADSAMGFCFLANIAIAIEAAK 167
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGS 187
HGL +V +ID+DVHHGNGT F + D+ +S HQDG Y PG + GRG G G+
Sbjct: 168 ARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTISLHQDGCYPPGYSGEQDRGRGVGLGA 227
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N+PLP GSG +++P +RF+P+LI+V+ GYDA+ +DPLA + + ++
Sbjct: 228 NINIPLPPGSGHATYLQAMERIVLPALERFEPELIIVACGYDANAVDPLARMLLHSESFR 287
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
++ ++ A+ LC R V EGGY+ + + + G + + + +
Sbjct: 288 LMTRALRLAAERLCQGRLVLVHEGGYSEAYVPFCGLATLEELSGVRTAVQDPMLELVHLQ 347
Query: 308 EPSAKVK----QAIERVKH 322
+P A ++ Q +ER+ H
Sbjct: 348 QPGAALQGFQEQWVERLAH 366
>gi|172038625|ref|YP_001805126.1| putative histone deacetylase superfamily protein [Cyanothece sp.
ATCC 51142]
gi|354554035|ref|ZP_08973340.1| histone deacetylase superfamily [Cyanothece sp. ATCC 51472]
gi|171700079|gb|ACB53060.1| putative histone deacetylase superfamily protein [Cyanothece sp.
ATCC 51142]
gi|353553714|gb|EHC23105.1| histone deacetylase superfamily [Cyanothece sp. ATCC 51472]
Length = 306
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 19/265 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I ++H Y+ G++ + G I G T + ++ +L A A + VD+V A
Sbjct: 59 IRNIHTDNYIKGVQALAAKGG--GFI----DGDTIVSPQSYNVALLAVNAWLDGVDTVLA 112
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
++ +P F L RPPGHHA+ MGFC+F N AIAA YA + G++RV I+D+DVHH
Sbjct: 113 TE-KP----AFVLCRPPGHHAVQTRGMGFCLFSNAAIAAHYALQCDGIERVAILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT ++P+I + S HQ +YPGTG+ DE G+ + LN+P+ GS +
Sbjct: 168 GNGTQAIVENNPNIAYCSLHQFPAYPGTGQGDETGK---YHNVLNIPMEPGSDLKRYQVA 224
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F E ++P F+ DL++VSAGYDA+ DPLAS+ Y + + + SR
Sbjct: 225 FKEQVIPFLSGFQGDLLIVSAGYDANQADPLASINLQPTDYGIFTQQLLTIT-----SRI 279
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFL 290
+F LEGGY+L++L+ SV + L
Sbjct: 280 LFGLEGGYDLSALAESVVATIEVCL 304
>gi|302795185|ref|XP_002979356.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
gi|300153124|gb|EFJ19764.1| hypothetical protein SELMODRAFT_110614 [Selaginella moellendorffii]
Length = 630
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/285 (35%), Positives = 152/285 (53%), Gaps = 20/285 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRA--SQQGIILIEGSGPTYATATTFQESLAAAGAGI 77
PA+ +++A+VH ++ + RA + L Y + + +L AAG+ +
Sbjct: 54 PATAEELATVHTDRHIEKMSSVSSRAYGKEGRAALARRYNSIYFNDGSSESALLAAGSVV 113
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH----GL 133
L VA R + A++RPPGHHA MGFC+F NVA+AA+ G
Sbjct: 114 ELSLKVA----RGELASAAAIVRPPGHHAEADEAMGFCLFNNVAVAAQILSSGKVSVAGS 169
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPG--TGKIDEVGRGDGEGST 188
+V I+D+DVHHGNGT + F+ DP++ + S H+ DG YPG G D+VG G G G
Sbjct: 170 HKVLIVDWDVHHGNGTQNMFWQDPNVLYFSVHRYDDGYFYPGGQEGNFDKVGGGAGAGFN 229
Query: 189 LNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+N+P P GG D V+ V++P A+ F PD++L+S G+D+ DPL + T Y
Sbjct: 230 INVPWPRGGYSDADYVAVWEHVLMPVAREFNPDIVLISGGFDSARGDPLGGCKLTPLGYS 289
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
++ + QLA G + V LEGGYNL S++ S + LG+
Sbjct: 290 IMTQELMQLA----GGKIVLALEGGYNLESIAESYLACVQVLLGD 330
>gi|308478251|ref|XP_003101337.1| hypothetical protein CRE_13460 [Caenorhabditis remanei]
gi|308263238|gb|EFP07191.1| hypothetical protein CRE_13460 [Caenorhabditis remanei]
Length = 524
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 118/193 (61%), Gaps = 10/193 (5%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
++RPPGHHA GFC+F NVA+AA+YAQR + KR+ I+D+DVHHGNGT + FY
Sbjct: 50 ALVIVRPPGHHASASKSSGFCIFNNVAVAAKYAQRRYKAKRILILDWDVHHGNGTQEIFY 109
Query: 155 DDPDIFFLSTHQDGS---YPGTGKID--EVGRGDGEGSTLNLPLPGGS-GDTAMRTVFHE 208
+D ++ ++S H+ YP D +VG G GEG ++N+P G GD + F
Sbjct: 110 EDANVMYMSIHRHDKGNFYPVGEPKDYFDVGEGAGEGMSVNVPFSGAQMGDIEYQMAFQR 169
Query: 209 VIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFF 268
+I+P + +F PDL+L+SAG+DA + DPL + T T+ ++ + LA R +
Sbjct: 170 IIMPISYQFNPDLVLISAGFDAAIDDPLGDYRVTPETFALMTYQLSSLA----SGRVITV 225
Query: 269 LEGGYNLNSLSYS 281
LEGGYNL S+S S
Sbjct: 226 LEGGYNLTSISNS 238
>gi|58264444|ref|XP_569378.1| histone deacetylase clr3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110099|ref|XP_776260.1| hypothetical protein CNBC6490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258932|gb|EAL21613.1| hypothetical protein CNBC6490 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225610|gb|AAW42071.1| histone deacetylase clr3, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 737
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 131/239 (54%), Gaps = 14/239 (5%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y T + +AG I SV ++ R FA++RPPGHHA P MGFC F N
Sbjct: 163 YVCRETAHCARLSAGGVIQACRSVCKNEVRN----AFAIVRPPGHHAEPNEHMGFCFFNN 218
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--G 174
VA+A R QR K+V I+D+DVHHGNGT AF+ D D+ ++S H+ YP + G
Sbjct: 219 VAVATREMQREGLAKKVLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNSDFG 278
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
++ VG G+G G ++N+P PG G GD F +I+P A F PDL+++SAG+DA
Sbjct: 279 SLNMVGDGEGVGKSVNIPWPGPGFGDADYIYAFQRIIMPIAYEFDPDLVIISAGFDAADG 338
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
D L + T Y ++ + L G + V LEGGYNL ++S S R LGE
Sbjct: 339 DMLGQCRVTPAAY----GHMTHMLSSLAGGKLVVALEGGYNLRAISDSALAVARVLLGE 393
>gi|291614006|ref|YP_003524163.1| Histone deacetylase [Sideroxydans lithotrophicus ES-1]
gi|291584118|gb|ADE11776.1| Histone deacetylase [Sideroxydans lithotrophicus ES-1]
Length = 307
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 139/271 (51%), Gaps = 15/271 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ + + VH YV + A A Q G + ++G T T+ +L AAGA + V
Sbjct: 51 ATREQLLRVHDADYVDAIAAA---APQHGRVELDGD--TSMNPYTYPAALRAAGAAVMAV 105
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D V A + F +RPPGHHA MGFC+F NVAI +A AHGL RV I D
Sbjct: 106 DLVMAGRVEN----AFCNVRPPGHHAESARAMGFCIFNNVAIGVAHALAAHGLGRVAIAD 161
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDT 200
FDVHHGNGT F+DDP + ST Q YP G G +N+PLP G+G
Sbjct: 162 FDVHHGNGTEQIFHDDPRVMLCSTFQHPFYPYAGA------DSGNDHIINVPLPAGTGSE 215
Query: 201 AMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDL 260
R +P +RFKP+L+L+SAG+DAH D +A L+ Y + +K LA+
Sbjct: 216 GFREAVTSRWLPALERFKPELLLISAGFDAHREDDMAMLKLVDADYGWVTEQLKLLAEKY 275
Query: 261 CGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
C R V LEGGY L++L S + G
Sbjct: 276 CHKRIVSTLEGGYELHALGRSAMAHIKVLSG 306
>gi|328717398|ref|XP_001942814.2| PREDICTED: histone deacetylase 6-like [Acyrthosiphon pisum]
Length = 733
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 158/315 (50%), Gaps = 30/315 (9%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ S H ++ LE ++ Y +T+++SL AAG+ I LV
Sbjct: 52 ATKEELLSKHTVEHIDLLESTEHYNDEKLEKFSSRYDSIYVHNSTYRQSLLAAGSSIELV 111
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
+V + + G A +RPPGHHA+ G+C NVAIA +Y ++++ I+D
Sbjct: 112 KAVVDGRIQN----GMAFVRPPGHHAMESEYSGYCFINNVAIATQYLLDKTAIQKILIVD 167
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGK--IDEVGRGDGEGSTLNLPLPG 195
+D+HHG T FY+DP + + S H + G +P + D VG G G G +N+PL
Sbjct: 168 WDIHHGQATQQMFYEDPRVLYFSIHRYEHGQFWPNLRESDFDHVGNGSGTGFNVNVPL-- 225
Query: 196 GSGDTAMRT-----VFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
DT M+ + H +++P A F PDLI+VS+GYD+ + DP + T Y
Sbjct: 226 --NDTGMKNEDYMAIIHYLLIPLATEFSPDLIIVSSGYDSAIGDPKGEMLVTPACY---- 279
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI-LYEEP 309
A+I Q L R V LEGGY L SL+ S A + RA LG+P P I ++P
Sbjct: 280 AHITQKLMSLSCGRVVAILEGGYYLKSLAESAALTLRALLGDPC-------PVIGSLKQP 332
Query: 310 SAKVKQAIERVKHIH 324
V + I V + H
Sbjct: 333 CKSVMETIGNVIYAH 347
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 77/182 (42%), Gaps = 22/182 (12%)
Query: 115 CVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTG 174
C I A YA + + LKR+ II+ N Y + I +S H
Sbjct: 537 CTLNASIIGANYAIKKYFLKRILIIEL-----NENVTQIYSNDQILVISMHS-------- 583
Query: 175 KIDEVGRGDGEGSTLNLPLPGGSGDTA-MRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
+ + E + +N+ + A T+ +I+P A + P+LI+VS+ + +++
Sbjct: 584 -LLNNSKAINENNHINISWSKKILNEAEFTTIVQHLILPIAYEYNPELIIVSSTFYSNIN 642
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSL--SYSVADSFRAFLG 291
+ + +Q T ++ + Q L R + + + ++ NS+ + + +A LG
Sbjct: 643 NYINGIQMTP----IMCGYLIQWLSTLANGRLILYEQDAHD-NSIHRNKCLLQCSKALLG 697
Query: 292 EP 293
EP
Sbjct: 698 EP 699
>gi|430811311|emb|CCJ31234.1| unnamed protein product [Pneumocystis jirovecii]
Length = 730
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/261 (38%), Positives = 146/261 (55%), Gaps = 22/261 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA-QRA 130
+AG I +VA K R A++RPPGHHA MGFC+F NVAIAA+ Q+
Sbjct: 223 SAGGTIETCVAVAEEKVRN----AIAIVRPPGHHAESDCAMGFCLFSNVAIAAKCIFQKF 278
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGE 185
++R+ I+D+DVHHGNGT FYDD + ++S H +DG YPGT G D+VG G G
Sbjct: 279 SNIQRILILDWDVHHGNGTQRVFYDDDSVLYISLHRYEDGRFYPGTKYGNYDKVGSGKGL 338
Query: 186 GSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
G T+N+P P G GD+ F +V++P A + P+++++S+G+DA + D + F T
Sbjct: 339 GKTVNIPWPCKGMGDSDYIYAFQKVVLPIAYEYNPNMVIISSGFDAAIGDEIGEC-FVTP 397
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
Y A++ Q+ L + V LEGGYNL+S+S S + +GEP P +
Sbjct: 398 VGY---AHMTQMLMGLAQGKLVAVLEGGYNLDSISRSALAVTKTLIGEPP-------PEL 447
Query: 305 LYEEPSAKVKQAIERVKHIHS 325
+ S Q I++V HS
Sbjct: 448 KITKASDACIQTIQKVISEHS 468
>gi|301774206|ref|XP_002922520.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 4-like
[Ailuropoda melanoleuca]
Length = 1192
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 103/266 (38%), Positives = 147/266 (55%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 882 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 937
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ R I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 938 DVSRTLIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGPGVGFN 997
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 998 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 1056
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGG++L ++ + A LG +E D
Sbjct: 1057 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 1107
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 1108 LPEKVLQQRPNANAVRSMEKVIEIHS 1133
>gi|410897317|ref|XP_003962145.1| PREDICTED: histone deacetylase 4-like [Takifugu rubripes]
Length = 1066
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 111/330 (33%), Positives = 174/330 (52%), Gaps = 43/330 (13%)
Query: 21 ASVDDIASVHARAYV-----SGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGA 75
AS++++ ++H+ A+V + L + +D + + + G + T + E ++ A
Sbjct: 695 ASLEELQTIHSEAHVLLYGTNPLRQKLDCSVSPMFVRLPCGGIGVDSDTIWNEVHSSTAA 754
Query: 76 GIA------LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
+A LV VA+ + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 755 RLAVGSVAELVFKVASGELKN----GFAVVRPPGHHAEESAPMGFCYFNSVAIAAKLLQQ 810
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
++++ I+D+DVHHGNGT AFY DP I ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 811 RLSVRKILIVDWDVHHGNGTQQAFYADPGILYISLHRYDDGNFFPGSGAPDEVGSGAGVG 870
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASL 239
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 871 FNVNMAFTGGLEPPMGDVEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVDGHA-SPLGGY 929
Query: 240 QFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE-----PS 294
+ T + L + LA G R V LEGG++L ++ + A LG P
Sbjct: 930 KLTAKCFGYLTRQLMGLA----GGRVVLALEGGHDLTAICDASEACVSALLGNELEPIPD 985
Query: 295 KASEFDNPAILYEEPSAKVKQAIERVKHIH 324
K ++ + P+A +++E+V H
Sbjct: 986 K--------LMQQRPNANAVRSMEKVLEAH 1007
>gi|157278867|gb|AAI15263.1| Hdac6 protein [Danio rerio]
Length = 929
Score = 170 bits (430), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 18/236 (7%)
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
F + + G+ + LVD V S+ R GF++ RPPGHHA GFC+F N+AIAAR
Sbjct: 6 FSSACLSVGSVLQLVDKVMTSQLRN----GFSINRPPGHHAQADKMNGFCMFNNLAIAAR 61
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGTGKID--EVG 180
YAQ+ H ++RV I+D+DVHHG G F +DP + + S H +DGS +P + D VG
Sbjct: 62 YAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVG 121
Query: 181 RGDGEGSTLNLPLPG---GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLA 237
G G+G +NLP SGD T F ++++P A F+P L+LV+AG+DA + DP
Sbjct: 122 SGAGQGYNINLPWNKVGMESGDYI--TAFQQLLLPVAYEFQPQLVLVAAGFDAVIGDPKG 179
Query: 238 SLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+Q + + +L +K +A+ R V LEGGYNL S + V S R+ LG+P
Sbjct: 180 GMQVSPECFSILTHMLKGVAQ----GRLVLALEGGYNLQSTAEGVCASMRSLLGDP 231
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 145/279 (51%), Gaps = 15/279 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++A H+ ++S ++ + + L + + + ++ +L AAG+
Sbjct: 342 ATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTCALLAAGSCFNSA 401
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR-AHGLKRVFII 139
++ + R A++RPPGHHA GFC F A+ ARYAQ RV I+
Sbjct: 402 QAILTGQVRN----AVAIVRPPGHHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIV 457
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSY-PGT--GKIDEVGRGDGEGSTLNLPLP 194
D+DVHHGNGT F +D + ++S H +DG++ P + D+VG G G G +N+P
Sbjct: 458 DWDVHHGNGTQHIFEEDDSVLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWN 517
Query: 195 GGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANI 253
GG GD FH +++P A+ F P+L+LVSAG+DA DPL Q T Y L +
Sbjct: 518 GGKMGDPEYMAAFHHLVMPIAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQL 577
Query: 254 KQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
LA R + LEGGYNL S+S S++ LG+
Sbjct: 578 MSLA----AGRVLIILEGGYNLTSISESMSMCTSMLLGD 612
>gi|345872726|ref|ZP_08824655.1| histone deacetylase superfamily [Thiorhodococcus drewsii AZ1]
gi|343918047|gb|EGV28818.1| histone deacetylase superfamily [Thiorhodococcus drewsii AZ1]
Length = 310
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/285 (36%), Positives = 145/285 (50%), Gaps = 14/285 (4%)
Query: 9 GSEIIELKNFSPA-SVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQ 67
G E++ SPA ++D +A VH RAY+ + +D A + L G T + +
Sbjct: 38 GMEMLVTHFDSPAATIDQLARVHDRAYIQSI---IDAAPKSDDALTWIDGDTAMNRHSLE 94
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+L +AGA I VD V +++ F +RPPGHHA GFC+F NVAI A +A
Sbjct: 95 AALHSAGAAILGVDLVMGNRHHT----AFCTVRPPGHHAGRAKASGFCIFNNVAIGAAHA 150
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGS 187
HGL+RV IIDFDVHHG+GT + F D I F S+ Q YPGTG D V +
Sbjct: 151 LEHHGLERVAIIDFDVHHGDGTEEIFTGDERILFCSSFQHPFYPGTGA-DSVA-----PN 204
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+NLP+P + A + +P F P LI+VSAG+D HV D +A +
Sbjct: 205 VVNLPMPRLTDGEAFKAQVEANWLPRLHAFAPQLIMVSAGFDGHVEDDMAHFNLREADFG 264
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + +LA C R V LEGGY L++L V+ +G
Sbjct: 265 WITREVHKLAAKYCKERVVSCLEGGYTLSALGRCVSTHIDELIGH 309
>gi|224369970|ref|YP_002604134.1| protein AcuC [Desulfobacterium autotrophicum HRM2]
gi|223692687|gb|ACN15970.1| AcuC [Desulfobacterium autotrophicum HRM2]
Length = 316
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 147/282 (52%), Gaps = 24/282 (8%)
Query: 7 FRGSEIIELKNFSPASVDD---IASVHARAYVSGLEKAMDRAS-----QQGIILIEGSGP 58
R + ++E PAS D I +VH YV E+ + Q I +E
Sbjct: 35 LRKANLLEQLTIIPASRADLKWILAVHDHDYVRRFEEVSLSGNHYFDDQDNQICVE---- 90
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFG 118
TY TA LA G ++D+V ++ F IRPPGHHA MGFC F
Sbjct: 91 TYETAF-----LAVGG----ILDAVQMMMDQKIDN-AFCAIRPPGHHAEVDKAMGFCYFN 140
Query: 119 NVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKI 176
N+AIAARY Q G++RV I+DFDVHHGNGT F DP +F+ S H+ S YPGTG+
Sbjct: 141 NIAIAARYLQSECGIERVGIVDFDVHHGNGTEHIFQSDPSVFYYSIHEHPSFAYPGTGRA 200
Query: 177 DEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPL 236
+ G G G T N P+ G GD +++ ++P +RFKP++ILVS G+DAHV D +
Sbjct: 201 FDEGTLKGFGFTKNSPVLPGRGDDNYKSLITRDLLPAFERFKPEIILVSTGFDAHVGDEM 260
Query: 237 ASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSL 278
+ + TT + + I LA R V LEGGY+L L
Sbjct: 261 SDMNLTTEGFSWIMETIMALANHHAQGRVVSILEGGYSLKLL 302
>gi|449506322|ref|XP_002190608.2| PREDICTED: histone deacetylase 4 [Taeniopygia guttata]
Length = 1056
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 746 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 801
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 802 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 861
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GDT T F V++P A F PD++LVS+G+DA P G
Sbjct: 862 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTP-----LG 916
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
Y + A L K L G R V LEGG++L ++ + A LG +E D
Sbjct: 917 GYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 971
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+ + +A ++E+V IHS
Sbjct: 972 LPEKVFQQRANANAVHSMEKVIEIHS 997
>gi|340368431|ref|XP_003382755.1| PREDICTED: histone deacetylase 6-like [Amphimedon queenslandica]
Length = 604
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 161/288 (55%), Gaps = 22/288 (7%)
Query: 21 ASVDDIASVHARAY----VSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
A+ +I VH++ + V+ ++++ Q+ + L Y ++ Q +L AAG+
Sbjct: 89 ATEQEILYVHSKTHYDEMVATENMSLEKLFQRALRL----NSIYINPSSMQCALLAAGS- 143
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRV 136
+ V + + + G A++RPPGHHA MGFC F NVAIAA+ A +G+KR+
Sbjct: 144 VCEVTKLVIDETVDN---GVAIVRPPGHHAESYTSMGFCFFNNVAIAAKMAIEEYGVKRI 200
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD---GSYPG--TGKIDEVGRGDGEGSTLNL 191
IID+DVHHGN T FYDD + ++S H+ G YPG G D+VG+G G G +N+
Sbjct: 201 LIIDWDVHHGNATQHMFYDDNRVLYVSLHRHDNGGFYPGGDEGDYDKVGKGKGSGYNVNI 260
Query: 192 PLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P GD + F+++I+P A ++P+L++VS+G+D+ DP+ + T Y +
Sbjct: 261 PWNLARMGDAEYMSAFYQIIMPIAFEYQPELVIVSSGFDSGEGDPIGGYRVTPNGYAHMT 320
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
+K LA + V LEGGYNL ++S+S++ + LG+ ++ E
Sbjct: 321 HQLKSLAD----GKIVVALEGGYNLTTISHSMSAVVQVLLGDTPRSLE 364
>gi|449273275|gb|EMC82819.1| Histone deacetylase 4, partial [Columba livia]
Length = 1078
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 768 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 823
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 824 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 883
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GDT T F V++P A F PD++LVS+G+DA P G
Sbjct: 884 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTP-----LG 938
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
Y + A L K L G R V LEGG++L ++ + A LG +E D
Sbjct: 939 GYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 993
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+ + +A ++E+V IHS
Sbjct: 994 LPEKVFQQRANANAVHSMEKVIEIHS 1019
>gi|348577311|ref|XP_003474428.1| PREDICTED: histone deacetylase 4-like [Cavia porcellus]
Length = 1111
Score = 170 bits (430), Expect = 1e-39, Method: Composition-based stats.
Identities = 104/267 (38%), Positives = 146/267 (54%), Gaps = 28/267 (10%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AAR Q+
Sbjct: 801 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAARLLQQRL 856
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ R+ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 857 SVSRILIVDWDVHHGNGTQQAFYSDPSVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 916
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GDT F V++P A F PD++LVS+G+DA H PL
Sbjct: 917 VNMAFTGGLDPPMGDTEYLAAFRTVVMPIASEFAPDMVLVSSGFDAVEGHPA-PLGGYNL 975
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG---EPSKASE 298
+ + L + LA G R V LEGG++L ++ + A LG EP
Sbjct: 976 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEK- 1030
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 1031 -----VLQQRPNANAVRSMEKVMEIHS 1052
>gi|402084204|gb|EJT79222.1| histone deacetylase HDA1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 758
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 163/318 (51%), Gaps = 39/318 (12%)
Query: 7 FRGS--EIIELKNFSP-----------ASVDDIASVHARAYVSGLEKAMDRASQQ----G 49
FRGS E++E+ +P AS ++I H + + ++ D +Q+
Sbjct: 123 FRGSDAELVEVLQTNPNAYLWRIPAREASREEICLAHDPKHYAWVQSLADTPTQELRELS 182
Query: 50 IILIEGSGPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPK 109
L +G Y + T++ SL +AG I +V + + + FA+IRPPGHHA
Sbjct: 183 RRLDQGRASLYVGSMTYEASLISAGGAIETCKAVVSGEVKN----AFAVIRPPGHHAEWD 238
Query: 110 GPMGFCVFGNVAIAARYAQRAHG--LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH-Q 166
PMGFC+F NV +AA+ Q+ +++ I+D+DVHHGNG + FYDDP++ ++STH
Sbjct: 239 APMGFCLFNNVPVAAKVCQKEFPDICRKILIVDWDVHHGNGIQNIFYDDPNVLYISTHVY 298
Query: 167 DGS--YPGT--------GKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQ 215
DG YPG G ID+ G G G +N+ G GD F ++I+P +
Sbjct: 299 DGGEFYPGRPENPSIPDGGIDKCGDRAGLGRNVNIGWDKQGMGDGEYMAAFQKIIMPIGR 358
Query: 216 RFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL 275
F PDL+++S+G+DA D L + Y A++ + L G + LEGGYNL
Sbjct: 359 EFDPDLVIISSGFDAAAGDQLGGCFVSPECY----AHMTHMLMSLAGGKVAVCLEGGYNL 414
Query: 276 NSLSYSVADSFRAFLGEP 293
+++S S R +GEP
Sbjct: 415 HAISQSALSVVRTLMGEP 432
>gi|344309841|ref|XP_003423583.1| PREDICTED: LOW QUALITY PROTEIN: histone deacetylase 10-like
[Loxodonta africana]
Length = 761
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 138/254 (54%), Gaps = 20/254 (7%)
Query: 74 GAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
GA + LVD+V G AL+RPPGHH+ GFCVF NVAIAA YA++ HGL
Sbjct: 93 GATLQLVDAVLTGTAHN----GLALVRPPGHHSQRTAANGFCVFNNVAIAAEYAKQKHGL 148
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGST 188
R+ I+D+DVHHG GT F DDP + + S H+ Y DEVGRG G G T
Sbjct: 149 HRILIVDWDVHHGQGTQYIFEDDPSVLYFSWHRYEHGRFWPYLRESDADEVGRGHGRGFT 208
Query: 189 LNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
+NLP G G+ F V++P A F P+L+L+SAG+D+ + DP ++ T +
Sbjct: 209 VNLPWNQVGMGNADYVAAFLHVLLPLAFEFDPELVLISAGFDSVIGDPEGQMRVTPECF- 267
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYE 307
A++ QL L R LEGGY+L L+ SV + +A LG+P+ P +
Sbjct: 268 ---AHLTQLLLVLARGRVCAVLEGGYHLELLAESVCMTVQALLGDPAP------PLLGAM 318
Query: 308 EPSAKVKQAIERVK 321
P ++I+RV+
Sbjct: 319 VPCGSALESIQRVR 332
>gi|327275871|ref|XP_003222695.1| PREDICTED: histone deacetylase 5-like [Anolis carolinensis]
Length = 1141
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 137/241 (56%), Gaps = 18/241 (7%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA+IRPPGHHA MGFC F +VAIAA+ Q+ + ++ ++D+D+HHGNGT AFY
Sbjct: 846 GFAVIRPPGHHAEESTAMGFCFFNSVAIAAKLLQQKLAISKILVVDWDIHHGNGTQQAFY 905
Query: 155 DDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGS----GDTAMRTVFH 207
DP++ ++S H+ +G+ +PG+G DEVG G G G +N+ GG GD T F
Sbjct: 906 SDPNVLYISLHRYDNGNFFPGSGAPDEVGSGMGVGYNVNIAWTGGVDPPIGDVEYLTAFR 965
Query: 208 EVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
V++P A F PD++L+SAG+DA H L PL T + L + +LA G R
Sbjct: 966 TVVMPIANEFSPDVVLISAGFDAVEGH-LSPLGGYSVTAKCFGHLTKQLMELA----GGR 1020
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
V LEGG++L ++ + A LG + + D +L ++P+A +E V I
Sbjct: 1021 VVLALEGGHDLTAICDASEACVSALLG--LELEQLDQ-TLLQQKPNANAVATLENVIEIQ 1077
Query: 325 S 325
S
Sbjct: 1078 S 1078
>gi|334347699|ref|XP_001364322.2| PREDICTED: histone deacetylase 10-like [Monodelphis domestica]
Length = 717
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 167/317 (52%), Gaps = 32/317 (10%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +++ VH+ YV+ ++ + ++ L + Y +TF + A GA + LV
Sbjct: 64 ATEEELEMVHSPEYVAVVKGTQAMSKKELQTLAQQYDAVYFHPSTFPCARMAVGATLQLV 123
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D++ A N G AL+RPPGHH+ GFCVF NVAIAA YA+R HGL+RV I
Sbjct: 124 DAILTGAVGN------GMALVRPPGHHSQRDAANGFCVFNNVAIAAEYAKRRHGLQRVLI 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKID--EVGRGDGEGSTLNLPL 193
+D+D+HHG GT F +DP + + S H+ +P + D VG+G G G T+N+P
Sbjct: 178 VDWDIHHGQGTQRIFENDPSVLYFSWHRYEHQSFWPRLQESDYNAVGQGPGRGFTINVPW 237
Query: 194 PGGSGDTAMR-----TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
T MR +VF V++P A F P+ +LVSAG+D+ + DP ++ T +
Sbjct: 238 ----NKTGMRNADYVSVFLHVLLPLAIEFDPEFVLVSAGFDSGIGDPEGQMEATPECFAH 293
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L + LA+ R LEGGY+L SL+ V + + LG+P A D PA
Sbjct: 294 LTLLLLPLAR----GRLCAVLEGGYHLRSLAECVCMTLQTLLGDPVPALSGD-PA----- 343
Query: 309 PSAKVKQAIERVKHIHS 325
P ++I+ V+ H+
Sbjct: 344 PCLSAVESIQNVRAAHA 360
>gi|319786211|ref|YP_004145686.1| histone deacetylase superfamily protein [Pseudoxanthomonas
suwonensis 11-1]
gi|317464723|gb|ADV26455.1| histone deacetylase superfamily [Pseudoxanthomonas suwonensis 11-1]
Length = 303
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 4/198 (2%)
Query: 94 LGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAF 153
+ F +RPPGHHA MGFC+ N+A+AA YA+ HG++R+ I+DFDVHHGNGT F
Sbjct: 110 IAFCAVRPPGHHATADTAMGFCLVNNIAVAAAYARDQHGIERIAIVDFDVHHGNGTQAIF 169
Query: 154 YDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPC 213
+DP + + STHQ G YP TG R G G+ N+ LP GSG R + + ++P
Sbjct: 170 REDPAVAYFSTHQSGLYPHTGH----NRERGVGNLHNVLLPPGSGGFRFRNTWADQLLPM 225
Query: 214 AQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGY 273
F+P L+++SAG+DAH+ DPLA L G + L + + +A R V LEGGY
Sbjct: 226 LDDFRPQLLMISAGFDAHLSDPLADLMLEAGDFAWLTSELLAIALRHGQGRVVSMLEGGY 285
Query: 274 NLNSLSYSVADSFRAFLG 291
NL++L+ +A G
Sbjct: 286 NLDALAECCVAHVKALGG 303
>gi|448655001|ref|ZP_21681853.1| acetoin utilization protein [Haloarcula californiae ATCC 33799]
gi|445765450|gb|EMA16588.1| acetoin utilization protein [Haloarcula californiae ATCC 33799]
Length = 335
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 141/279 (50%), Gaps = 10/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E A +D + +VH Y++ + D T A T+ +LA+
Sbjct: 38 VEYVAADDADLDLVRAVHDTDYIAEFREFCDDGGGNW------DADTVAVEETWDAALAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + ++ D P F+L RPPGHHA+ MGFC F N A A A
Sbjct: 92 AGLAVWAAEAALDGNTGRDTP--FSLGRPPGHHAVGDDAMGFC-FINNAAVAAQAALEAD 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG I E G GD +G+ LN+
Sbjct: 149 ADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHEDGLYPGTGDISETGTGDADGTNLNVK 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G+ E I P + + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 209 YKPGADTADYLAAIDECIAPAIRDYDPDLLLISAGFDAHEHDPISRMRVSTEGYGAMTDR 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++ L D C + LEGGY L++LS SV F G
Sbjct: 269 MRSL-TDACDAALGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|156937987|ref|YP_001435783.1| histone deacetylase superfamily protein [Ignicoccus hospitalis
KIN4/I]
gi|156566971|gb|ABU82376.1| histone deacetylase superfamily [Ignicoccus hospitalis KIN4/I]
Length = 345
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/301 (36%), Positives = 163/301 (54%), Gaps = 35/301 (11%)
Query: 1 MELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--- 57
++L + +E+++ P ++ VH R YV +++ +IE G
Sbjct: 31 LDLMKRTKLPNYVEVRSPVPIDERELELVHDRDYVEYVKR-----------VIEAGGGYL 79
Query: 58 --PTYATATTFQESLAAAGAGIALVDSVAASKNRP---DPPLGFALIRPPGHHAIPKGPM 112
TYA+ T+++ +L AAG +VA + R D L FA +RPPGHHA
Sbjct: 80 DPDTYASPTSWEPALYAAG-------TVAYAAQRAVEGDHWLAFAAVRPPGHHARRSEGR 132
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--Y 170
GFC+F NVA+AA +R G+ RV ++D DVH G+GT FY+ ++ ++STHQD Y
Sbjct: 133 GFCIFNNVALAAEVLRR-RGM-RVAVVDIDVHWGDGTAYIFYNTDEVLYVSTHQDPRTLY 190
Query: 171 PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
P G + G G GEG T+N+PLP G+GD HEV++P + + P +LVSAG+D
Sbjct: 191 PFEGFPSQKGSGKGEGYTVNVPLPPGTGDKGFLYALHEVVLPVLEAYLPQALLVSAGWDT 250
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
H LDPLASL+ T ++ +++ A+ L G V LEGGY +++ VA S L
Sbjct: 251 HWLDPLASLEVTVDGHWEAVSSLASFAESL-GIPIVIALEGGY----VNWVVARSTLNSL 305
Query: 291 G 291
G
Sbjct: 306 G 306
>gi|254559010|ref|YP_003066105.1| histone deacetylase [Methylobacterium extorquens DM4]
gi|254266288|emb|CAX22049.1| histone deacetylase family protein [Methylobacterium extorquens
DM4]
Length = 341
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 144/270 (53%), Gaps = 13/270 (4%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
+A VH AYV + Q GII T+ +A T + L +AGA + VD V
Sbjct: 55 LARVHEEAYVEATIAGL----QNGIIAPVDED-THVSAGTLEAVLRSAGAAVQAVDEVMT 109
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
R F+ +RPPGHHA GFC F N+A+AAR+AQ AHG RV I+D+D HH
Sbjct: 110 GTVRN----AFSAMRPPGHHAGRARTAGFCYFNNIAVAARHAQAAHGAGRVAILDWDAHH 165
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
G+GT + F+ DP + F STHQ YPGTG E G G+ +N+PLP G+
Sbjct: 166 GDGTQEIFWSDPTVLFCSTHQWPFYPGTGAASECGE---HGTIVNVPLPAGADGAMFGEA 222
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
+++P F+PDLIL+SAG+DAH DP++ L T Y + +A C R
Sbjct: 223 LRTMVLPRIAAFRPDLILISAGFDAHWRDPMSDLALTEADYRWATERLADIADRECDGRI 282
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFLGEPSK 295
V LEGGY+L L+ SV A L EP+
Sbjct: 283 VSLLEGGYDLVGLARSVEAHVTALL-EPAS 311
>gi|443894818|dbj|GAC72165.1| histone deacetylase complex, catalytic component HDA1 [Pseudozyma
antarctica T-34]
Length = 725
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 151/277 (54%), Gaps = 25/277 (9%)
Query: 24 DDIASVHARAYVSGLEKAM----DRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
D++ VH + G+E+ D +Q + +E Y + + + G I L
Sbjct: 144 DEVMLVHDQGIWDGVERTALYHPDIIKEQ-VPRLENLSSLYINEHSAFAARLSCGGAIEL 202
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVF 137
D++A+ + R GFA++RPPGHHA P MGFC + NVA+A RY Q+ + ++++
Sbjct: 203 CDAIASGRIRN----GFAIVRPPGHHAEPDKSMGFCFYNNVAVATRYLQQKYPQTIRKIL 258
Query: 138 IIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGS--YPGT--GKIDEVGRGDGEGSTLNLP 192
I+D+DVHHGNGT AF +D ++ ++S H+ +G YPG+ G D G G GEG ++N+P
Sbjct: 259 ILDWDVHHGNGTQRAFENDAEVLYVSLHRYEGGAFYPGSKYGNYDSAGTGPGEGKSVNVP 318
Query: 193 LP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
P G GD FH +++P A F PD +++SAG+DA DP+ + T G Y A
Sbjct: 319 WPTKGMGDADYMYAFHHLVMPIALEFAPDFVIISAGFDAAEGDPIGESRVTPGGY----A 374
Query: 252 NIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRA 288
+ LC + LEGGYN + +VADS A
Sbjct: 375 QMTHALTSLCDGKVAVVLEGGYNPD----AVADSAHA 407
>gi|336372977|gb|EGO01316.1| hypothetical protein SERLA73DRAFT_72261 [Serpula lacrymans var.
lacrymans S7.3]
Length = 678
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 148/274 (54%), Gaps = 18/274 (6%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y T + +L + G I +VA ++ + FA++RPPGHHA P MGFC F N
Sbjct: 146 YVNTGTTRSALLSCGGVIEACLAVARNELKK----AFAIVRPPGHHAEPDEHMGFCFFNN 201
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--G 174
VA+AAR Q +KR+ I+D+DVHHGNGT AF DDP I ++S H Q+G YPG G
Sbjct: 202 VAVAARVVQLLTPVKRIMILDWDVHHGNGTQRAFNDDPSILYVSLHRYQNGQFYPGGTFG 261
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
I G G G G ++N+P P G GD F +++P A F P+L+++SAG+DA
Sbjct: 262 GISSCGEGAGRGYSVNIPWPEIGMGDADYLHAFTSIVMPIAMEFAPELVIISAGFDAVEG 321
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
DPL + T Y A++ + L G + + LEGGY +++ + S R LGEP
Sbjct: 322 DPLGECRVTPIGY----AHMTHMLSGLAGGKLIVALEGGYCVDATANSALAVTRVMLGEP 377
Query: 294 SKASEFDNPAILYEEPSAKVKQ-AIERVKHIHSL 326
E P E + V Q A+E+ K+ S+
Sbjct: 378 ---PEELPPMTATEAATETVWQVALEQSKYWKSV 408
>gi|14190349|gb|AAK55655.1| histone deacetylase HDA1 [Candida albicans]
Length = 653
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 163/313 (52%), Gaps = 23/313 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH+ ++ ++ D + Q + E Y ++ + + G I
Sbjct: 187 ATSEEILQVHSEDHLKFIQSTEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P P GFC+F NVA+AA+ + + ++R+ I
Sbjct: 247 KAVIEGRVKN----SLAIVRPPGHHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+DP + ++S H ++G YPGT G +++VG G GEG T+N+P
Sbjct: 303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G D F+++I P F PDLI+VS+G+DA D + T Y +
Sbjct: 363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGGCHVTPAGYGYMTHT 422
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K +A+ + LEGGYNL+S S S + +GEP + + + P A+
Sbjct: 423 LKGIAR----GKLAVILEGGYNLDSTSKSALAVAKVLVGEPPENT-------ITLRPQAE 471
Query: 313 VKQAIERVKHIHS 325
+ ++ V I S
Sbjct: 472 AIEVVDEVIKIQS 484
>gi|260892895|ref|YP_003238992.1| histone deacetylase [Ammonifex degensii KC4]
gi|260865036|gb|ACX52142.1| Histone deacetylase [Ammonifex degensii KC4]
Length = 450
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 126/211 (59%), Gaps = 17/211 (8%)
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHA--IPKGPMGFCVFGNVAIAARYA 127
L AAG+ I L A + R + GFAL+RPPGHHA + G GFC N AI Y
Sbjct: 78 LVAAGSAIHL----AEAWRRGEIKRGFALVRPPGHHARRVVHGNRGFCNINNEAIMIEYL 133
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGE 185
+R +G++R+ I+D DVHHG+GT D +Y DP++ F+S HQDG YPGTG ++E+G
Sbjct: 134 RRHYGVRRIAIVDTDVHHGDGTQDIYYHDPEVLFISLHQDGRTLYPGTGSVNELGGPGAF 193
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G TLN+PLP + D + V E+++P F+P+LI+ SAG D H DPLA + FT
Sbjct: 194 GYTLNVPLPPRTNDEGILYVMEELVLPVLADFQPELIVNSAGQDNHYSDPLADMCFTAQG 253
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
Y L A +K DLC LEGGY++
Sbjct: 254 YAQLNALLK---PDLC------VLEGGYSIE 275
>gi|253990107|ref|YP_003041463.1| histone deacetylase family protein [Photorhabdus asymbiotica]
gi|253781557|emb|CAQ84720.1| histone deacetylase family protein [Photorhabdus asymbiotica]
Length = 370
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 140/268 (52%), Gaps = 22/268 (8%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQESLAAAGAGIALVDSVA 84
+ +H Y+ ++ D G++ IE GP SLA A L +
Sbjct: 75 LRKIHPEKYLKEFKQISDNGG--GMLGIEAPLGPGSYEIAKLSASLACAAVETVLSGELD 132
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ ++L RPPGHH +P MGFC N+ +A A+ LKRV +ID+DVH
Sbjct: 133 NA---------YSLSRPPGHHCLPDKSMGFCFLANIPLAIEQAKARFDLKRVAVIDWDVH 183
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HGNGT +++ D+ +S HQDG + PG D++G G+G G LN+PL G+G +
Sbjct: 184 HGNGTQHIYWNRSDVLTISIHQDGCFPPGYSGEDDIGEGEGTGYNLNIPLLAGAGHNSYI 243
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
++++P +RFKP+LI+V+ GYDA+ +DPLA +Q + ++ + ++Q A LC
Sbjct: 244 YAMTQIVLPALKRFKPELIIVACGYDANAVDPLARMQLHSESFREMTQLVQQTADSLCDG 303
Query: 264 RCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ V EGGY A+S+ F G
Sbjct: 304 KLVVVHEGGY---------AESYVPFCG 322
>gi|149037567|gb|EDL91998.1| histone deacetylase 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 966
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 22/264 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 656 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 711
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 712 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 771
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 772 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 830
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L + LA G R V LEGG++L ++ + A LG E
Sbjct: 831 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG---NELEPLP 883
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 884 EKVLHQRPNANAVHSMEKVMGIHS 907
>gi|33115103|gb|AAP95014.1|AF307341_1 putative histone deacetylase [Cochliobolus carbonum]
Length = 847
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 154/313 (49%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ +I +H + ++ + S + E Y +T++ + AAG I
Sbjct: 182 ATRPEILLIHTEEHYDLVKSFQNMTSDELKFEAERLDSIYLNNSTYECAKLAAGGAIEAC 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V R A+IRPPGHHA P GFC+F NV IA R Q A+ ++V I
Sbjct: 242 KAVVQGAVR----NAIAIIRPPGHHAESDQPSGFCIFNNVPIATRVCQNAYPETCRKVLI 297
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNG AFYDDP++ ++S H +DG+ YP G +D G G GEG +N+P
Sbjct: 298 LDWDVHHGNGIQHAFYDDPNVLYISLHVFKDGTFYPNLPDGNLDYCGEGRGEGKNVNIPW 357
Query: 194 -PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G GD+ F +V++P A F PDL+++SAG+DA D L T Y +
Sbjct: 358 AEHGMGDSEYLYAFQQVVMPIATEFNPDLVIISAGFDAAEGDLLGGCFVTPACYGHMTHM 417
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+ LAK + V LEGGYNL S++ S + + EP D PA P
Sbjct: 418 LMSLAK----GKLVVCLEGGYNLRSIARSALAVTKVLMLEPPDRLRDDLPA-----PKDS 468
Query: 313 VKQAIERVKHIHS 325
+E VK HS
Sbjct: 469 AVYIVENVKRQHS 481
>gi|121604127|ref|YP_981456.1| histone deacetylase superfamily protein [Polaromonas
naphthalenivorans CJ2]
gi|120593096|gb|ABM36535.1| histone deacetylase superfamily [Polaromonas naphthalenivorans CJ2]
Length = 317
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 142/288 (49%), Gaps = 22/288 (7%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA-------- 61
+ ++L+ A++ DI H R V+ + D+ + I GP +
Sbjct: 41 KDALDLQEAPLAAIGDIELAHDRMLVAAIRGLSDQLADD----IRAGGPAHVQIDPDTAL 96
Query: 62 TATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVA 121
T+ +L AAGA IA D+V A + F +RPPGHHA MGFC F N+A
Sbjct: 97 NVHTWNAALRAAGAVIAATDAVMAGEMDN----AFCAVRPPGHHAERSKAMGFCFFNNIA 152
Query: 122 IAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGR 181
IAA+YA HGLKRV I+DFDVHHGNGT D D I +S Q +P +G
Sbjct: 153 IAAKYALERHGLKRVAIVDFDVHHGNGTEDIVRGDERILMVSFFQHPLFPFSGA------ 206
Query: 182 GDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G + +NLP+P + +R + + +P + FKP++I +SAG+DAH D L +
Sbjct: 207 GTQAPNMVNLPVPAYTKGMEVRELIDMMWMPRLEAFKPEMIFISAGFDAHRDDDLGQMNL 266
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAF 289
Y + IK +AK R V LEGGYNL +L SV R
Sbjct: 267 NEADYAWITERIKNVAKRHAKGRIVSALEGGYNLGALGRSVEAHIRVL 314
>gi|417413582|gb|JAA53111.1| Putative histone deacetylase complex catalytic component hda1,
partial [Desmodus rotundus]
Length = 1165
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 154/296 (52%), Gaps = 23/296 (7%)
Query: 20 PASVDDIASVHARAYVSGL---EKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAG 76
PA+ ++ + H+ YV L EK R + E Y +TF + A GA
Sbjct: 543 PATDAELLTCHSAEYVGRLRATEKMKTRELHRESANFES---IYICPSTFACAQLATGAT 599
Query: 77 IALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ--RAHGLK 134
LV++V A + G A++RPPGHHA GFC F +VA+AAR+AQ H L
Sbjct: 600 CCLVEAVLAGEVLN----GIAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGHAL- 654
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTL 189
R+ I+D+DVHHGNGT F +DP + ++S H+ G++ G ++VGR G G T+
Sbjct: 655 RILIVDWDVHHGNGTQHIFEEDPSVLYISLHRYDHGTFFPMGDEGTSNQVGRSAGTGFTV 714
Query: 190 NLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
N+ G GD+ +H +++P A F P+L+LVSAG+DA DPL Q + Y
Sbjct: 715 NVAWNGPRVGDSEYLAAWHRLVLPIAYEFNPELVLVSAGFDAAWGDPLGGCQLSPEGY-- 772
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAI 304
A++ L L G + LEGGYNL S+S S+A R LG+P P +
Sbjct: 773 --AHLTHLLMGLAGGHIILILEGGYNLTSISESMAACTRTLLGDPPPLLTLSRPPL 826
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/284 (34%), Positives = 146/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + IL + Y ++ + A+G+ + LV
Sbjct: 150 AEKEELMLVHSLEYIDLMETTQYMNEGELRILADTYDSVYLHPNSYTCACLASGSVLRLV 209
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ + G A+IRPPGHHA G+C+F +VA+AARYAQ H ++RV I+D
Sbjct: 210 DAVLGAEIQN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQVKHRIQRVLIVD 265
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYP--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H Q +P +G G G+G T+N+P
Sbjct: 266 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 325
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F V++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 326 VGMRDADYIAAFLRVLLPVALEFQPQLVLVAAGFDALQGDPKGEMATTPAGF----AQLT 381
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G R + LEGGYNL SL+ V+ S LG+P E
Sbjct: 382 HLLMGLAGGRLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLE 425
>gi|448637991|ref|ZP_21676042.1| acetoin utilization protein [Haloarcula sinaiiensis ATCC 33800]
gi|445763877|gb|EMA15051.1| acetoin utilization protein [Haloarcula sinaiiensis ATCC 33800]
Length = 335
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 141/279 (50%), Gaps = 10/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E A +D + +VH Y++ + D T A T+ +LA+
Sbjct: 38 VEYVAADDADLDLVRAVHDTDYIAEFREFCDDGGGNW------DADTVAVEETWDAALAS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + ++ D P F+L RPPGHHA+ MGFC F N A A A
Sbjct: 92 AGLAVWAAEAALDGNTGRDTP--FSLGRPPGHHAVGDDAMGFC-FINNAAVAAQAALEAD 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG I E G GD +G+ LN+
Sbjct: 149 ADRVAIFDWDVHHGNGTQDIFYDRSDVFYASIHEDGLYPGTGDISETGTGDADGTNLNVK 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G+ E I P + + PDL+L+SAG+DAH DP++ ++ +T Y +
Sbjct: 209 YKPGADTADYLAAIDECIAPAIRDYDPDLLLISAGFDAHEHDPISRMRVSTEGYGAMTDR 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
++ L D C + LEGGY L++LS SV F G
Sbjct: 269 MRSL-TDACDAALGIILEGGYGLDTLSDSVTTVHEVFDG 306
>gi|148708070|gb|EDL40017.1| histone deacetylase 4, isoform CRA_a [Mus musculus]
Length = 965
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 22/264 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 655 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 710
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 711 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 770
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 771 VNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 829
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L + LA G R V LEGG++L ++ + A LG E
Sbjct: 830 SAKCFGYLTKQLMGLA----GGRLVLALEGGHDLTAICDASEACVSALLG---NELEPLP 882
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 883 EKVLHQRPNANAVHSMEKVMDIHS 906
>gi|336385808|gb|EGO26955.1| hypothetical protein SERLADRAFT_436772 [Serpula lacrymans var.
lacrymans S7.9]
Length = 681
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 148/274 (54%), Gaps = 18/274 (6%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y T + +L + G I +VA ++ + FA++RPPGHHA P MGFC F N
Sbjct: 146 YVNTGTTRSALLSCGGVIEACLAVARNELKK----AFAIVRPPGHHAEPDEHMGFCFFNN 201
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--G 174
VA+AAR Q +KR+ I+D+DVHHGNGT AF DDP I ++S H Q+G YPG G
Sbjct: 202 VAVAARVVQLLTPVKRIMILDWDVHHGNGTQRAFNDDPSILYVSLHRYQNGQFYPGGTFG 261
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
I G G G G ++N+P P G GD F +++P A F P+L+++SAG+DA
Sbjct: 262 GISSCGEGAGRGYSVNIPWPEIGMGDADYLHAFTSIVMPIAMEFAPELVIISAGFDAVEG 321
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
DPL + T Y A++ + L G + + LEGGY +++ + S R LGEP
Sbjct: 322 DPLGECRVTPIGY----AHMTHMLSGLAGGKLIVALEGGYCVDATANSALAVTRVMLGEP 377
Query: 294 SKASEFDNPAILYEEPSAKVKQ-AIERVKHIHSL 326
E P E + V Q A+E+ K+ S+
Sbjct: 378 ---PEELPPMTATEAATETVWQVALEQSKYWKSV 408
>gi|427723376|ref|YP_007070653.1| histone deacetylase superfamily protein [Leptolyngbya sp. PCC 7376]
gi|427355096|gb|AFY37819.1| histone deacetylase superfamily [Leptolyngbya sp. PCC 7376]
Length = 305
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/268 (36%), Positives = 141/268 (52%), Gaps = 23/268 (8%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
I +H+ Y+ L+K D T ++ +++ +L A A + +D + A
Sbjct: 59 ILKLHSPEYLGELKKVADSGGAHW------DPDTVVSSRSYEVALLAVNACLDGIDKILA 112
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ FAL+RPPGHHA+ MGFC+ G+VAI A YA + RV I+D+DVHH
Sbjct: 113 TGGP-----AFALVRPPGHHAVRSNAMGFCLLGSVAITAHYALSFENISRVAILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D+PDI + S HQ +YPGTGK G+ + LN+P+ GS A R
Sbjct: 168 GNGTEYLVEDNPDILYCSLHQYPAYPGTGKASFTGK---HNNVLNIPMAPGSNGVAYRHQ 224
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F ++P ++F+PD++LVSAGYDA DPLA + Y + + L +C
Sbjct: 225 FESAVLPRLRQFQPDILLVSAGYDASAKDPLAGMNLEPSDYKRFSEYCQTL-------KC 277
Query: 266 --VFFLEGGYNLNSLSYSVADSFRAFLG 291
+F LEGGY+L L+ SV + F+
Sbjct: 278 PILFALEGGYHLKDLAESVVATLEPFVN 305
>gi|448240336|ref|YP_007404389.1| histone deacetylase superfamily protein [Serratia marcescens WW4]
gi|445210700|gb|AGE16370.1| histone deacetylase superfamily protein [Serratia marcescens WW4]
Length = 370
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/267 (34%), Positives = 148/267 (55%), Gaps = 15/267 (5%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-GPTYATATTFQE 68
S + L + PA+ +D+ +H Y+ ++ D S G++ E GP +++
Sbjct: 59 SRQLTLLSAEPATEEDLLRIHPAHYLQRFKQVSD--SGGGLLGEEAQLGPG-----SYEI 111
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+ +AG A V++V + +AL RPPGHH +P MGFC N+ IA A+
Sbjct: 112 AKLSAGLACAAVEAVLQGELDN----AYALSRPPGHHCLPDQSMGFCFLANIPIAIERAK 167
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG--TGKIDEVGRGDGEG 186
+GL +V ++D+DVHHGNGT ++ D+ LS HQDG +P +G+ D G G G G
Sbjct: 168 ARYGLGKVAVLDWDVHHGNGTQHIYWQRGDVLTLSLHQDGCFPAGYSGEQDR-GEGAGAG 226
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
+N+P+ G+GD +I+P ++F+P+LI+V+ GYDA+ LDPLA +Q + ++
Sbjct: 227 CNVNVPMLAGAGDDGYLHAMRRIIIPSLEKFEPELIIVACGYDANALDPLARMQLHSDSF 286
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGY 273
+ A ++ A LCG + V EGGY
Sbjct: 287 RAMTALVQDAADRLCGGKLVMVHEGGY 313
>gi|381152198|ref|ZP_09864067.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methylomicrobium album BG8]
gi|380884170|gb|EIC30047.1| deacetylase, histone deacetylase/acetoin utilization protein
[Methylomicrobium album BG8]
Length = 365
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/214 (42%), Positives = 121/214 (56%), Gaps = 5/214 (2%)
Query: 98 LIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDP 157
L RPPGHHA MGFC+ NVAIAA +A A G RV ++D+DVHHGNGT F DP
Sbjct: 122 LWRPPGHHACTDQAMGFCILNNVAIAAHHAL-ARGASRVLVVDWDVHHGNGTQQIFESDP 180
Query: 158 DIFFLSTHQDG-SYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR 216
+ F+S HQ YP TG +E G G+G G T+N+PL G+G +A R F +++P A +
Sbjct: 181 RVLFISIHQGRPQYPETGLPNETGAGEGRGFTVNIPLSVGAGRSAYREAFQRLVLPIADQ 240
Query: 217 FKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLN 276
+ P + VSAGYDAH DPL + + Y L + +R FFLEGGYN
Sbjct: 241 YAPTITFVSAGYDAHERDPLGGMCLRSEDYGELTRLLIGALGGPHAARIGFFLEGGYNRQ 300
Query: 277 SLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
++ SV + A LG A+E + P + PS
Sbjct: 301 GITESVCSTADALLG---GATEREIPEAIGSAPS 331
>gi|367000379|ref|XP_003684925.1| hypothetical protein TPHA_0C03390 [Tetrapisispora phaffii CBS 4417]
gi|357523222|emb|CCE62491.1| hypothetical protein TPHA_0C03390 [Tetrapisispora phaffii CBS 4417]
Length = 701
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/314 (31%), Positives = 163/314 (51%), Gaps = 23/314 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH ++ LE ++ + E Y ++ + + G I
Sbjct: 121 ATKEEILDVHTEEHMQFLESTEKMTREELLSKTEKGDSVYLNNDSYISARLSCGGAIEAC 180
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NV++AA+ + + ++++ I
Sbjct: 181 KAVVEGRVKN----ALAIVRPPGHHAEPQAAGGFCLFSNVSVAAKSILKTYPESVRKILI 236
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPG--TGKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT AFY+D ++ ++S H+ YPG G D+VG G G+G N+
Sbjct: 237 VDWDIHHGNGTQKAFYEDDNVLYISLHRFELGKFYPGFPEGNYDKVGDGKGKGFNCNITW 296
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P G GD F ++++P A+ F+PDL++VS+G+DA D + T Y +
Sbjct: 297 PVKGVGDVEYIWAFEQIVIPMAREFRPDLVIVSSGFDAAHGDTIGQCHVTPNCYGYMTHM 356
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE-PSKASEFDNPAILYEEPSA 311
+K LA+ G+ CV LEGGYNL+S+S S + +GE P + E D +P
Sbjct: 357 LKSLAR---GNLCV-VLEGGYNLDSISNSALAVAKILIGEPPDEIPESD------RDPKP 406
Query: 312 KVKQAIERVKHIHS 325
V + I +V + S
Sbjct: 407 GVLEMINKVIRVQS 420
>gi|74140673|dbj|BAE43272.1| unnamed protein product [Mus musculus]
gi|148708072|gb|EDL40019.1| histone deacetylase 4, isoform CRA_c [Mus musculus]
Length = 910
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 146/264 (55%), Gaps = 22/264 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 600 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 655
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 656 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 715
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 716 VNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 774
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L + LA G R V LEGG++L ++ + A LG E
Sbjct: 775 SAKCFGYLTKQLMGLA----GGRLVLALEGGHDLTAICDASEACVSALLG---NELEPLP 827
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 828 EKVLHQRPNANAVHSMEKVMDIHS 851
>gi|83719797|ref|YP_442634.1| histone deacetylase family protein [Burkholderia thailandensis
E264]
gi|83653622|gb|ABC37685.1| histone deacetylase family protein [Burkholderia thailandensis
E264]
Length = 340
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 112/180 (62%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F+L RPPGHH + PMGFC+ N+ IA A+ H ++RV +ID+DVHHGNGT +YD
Sbjct: 105 FSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHRVERVAVIDWDVHHGNGTQAIYYD 164
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
D D +S HQD + PG DE G G G G+ +N+PL G+GD A R F +++P
Sbjct: 165 DADTLTISLHQDRCFPPGYSGADERGAGAGIGANINVPLLAGAGDDAYRYAFERIVLPAL 224
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F+P+L++V++G DA+ +DPLA +Q + +Y + +K A+ C R V EGGY+
Sbjct: 225 DAFRPELVVVASGLDANAVDPLARMQLHSDSYRFMTHALKAAAQRHCAGRLVVVHEGGYS 284
>gi|149037569|gb|EDL92000.1| histone deacetylase 4 (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 911
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 22/264 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 601 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 656
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 657 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 716
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 717 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 775
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
+ + L + LA G R V LEGG++L ++ + A LG E
Sbjct: 776 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG---NELEPLP 828
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 829 EKVLHQRPNANAVHSMEKVMGIHS 852
>gi|448573175|ref|ZP_21640759.1| HdaI-type histone deacetylase [Haloferax lucentense DSM 14919]
gi|448597214|ref|ZP_21654352.1| HdaI-type histone deacetylase [Haloferax alexandrinus JCM 10717]
gi|445718940|gb|ELZ70623.1| HdaI-type histone deacetylase [Haloferax lucentense DSM 14919]
gi|445741095|gb|ELZ92600.1| HdaI-type histone deacetylase [Haloferax alexandrinus JCM 10717]
Length = 337
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 170/318 (53%), Gaps = 25/318 (7%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG----PTYATATTFQE 68
+E + SPA +A+VH YV + +G G T A ++
Sbjct: 38 VEYVDASPAEKSTVAAVHDDGYVDEFHE----------FCRDGGGNWDPDTVAVEASWDA 87
Query: 69 SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQ 128
+L +AG + + D P F+L RPPGHHA+ MGFC F N A+AA+
Sbjct: 88 ALTSAGLAEWAARAALDGDDGRDTP--FSLGRPPGHHAVEDDAMGFCFFNNAAVAAQAVI 145
Query: 129 RAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGST 188
+RV I D+DVHHGNGT D FYD D+F+ S H+DG YPGTG+++E G GDGEGST
Sbjct: 146 DDGLAERVAIFDWDVHHGNGTQDIFYDRGDVFYTSIHEDGLYPGTGEVEETGEGDGEGST 205
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYM 248
LN+PL G+GD F E I P +RF PDL +VSAG+DAH DP++ ++ +T Y M
Sbjct: 206 LNVPLHAGAGDADYVYSFDEAIAPAVERFDPDLFIVSAGFDAHRHDPISRMRVSTEGYAM 265
Query: 249 LAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEE 308
L +++L ++ + F LEGGY L++LS VA F G + + E+
Sbjct: 266 LTECVQELCEE-TDAAIAFVLEGGYGLDTLSEGVATVHETFDGRIAMDPD--------ED 316
Query: 309 PSAKVKQAIERVKHIHSL 326
P K + ++ V+ H L
Sbjct: 317 PDEKNVELVDDVRAAHGL 334
>gi|312134877|ref|YP_004002215.1| histone deacetylase superfamily [Caldicellulosiruptor owensensis
OL]
gi|311774928|gb|ADQ04415.1| histone deacetylase superfamily [Caldicellulosiruptor owensensis
OL]
Length = 438
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/210 (42%), Positives = 119/210 (56%), Gaps = 17/210 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHA--IPKGPMGFCVFGNVAIAARYAQR 129
AAG+ I + V + + GFALIRPPGHHA I G GFC+ N AI Y ++
Sbjct: 83 AAGSAITIAKKVLSKEVEK----GFALIRPPGHHAHRITYGDRGFCIINNEAIMVEYLRK 138
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGDGEGS 187
H +K++ IID D HHG+GT D F++D D+ F+S HQDG+ YPGTG DE+G G
Sbjct: 139 EHKIKKIAIIDTDCHHGDGTQDIFWNDKDVLFISLHQDGTTLYPGTGFTDEIGGPSAIGY 198
Query: 188 TLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYY 247
TLNLPLP + D +I+P + FKPD+I+ SAG D H DPL ++ F+ Y
Sbjct: 199 TLNLPLPPYTSDEGFLYCLDNLIIPVLEEFKPDIIINSAGQDNHYSDPLTNMNFSAQGYA 258
Query: 248 MLAANIKQLAKDLCGSRCVFFLEGGYNLNS 277
L I S + LEGGY++ S
Sbjct: 259 KLTEKI---------SPDISVLEGGYSIES 279
>gi|334350414|ref|XP_001371963.2| PREDICTED: histone deacetylase 6-like [Monodelphis domestica]
Length = 1117
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 149/281 (53%), Gaps = 14/281 (4%)
Query: 19 SPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
PA+ +++ VH++ YV + + L + Y +F +L A GA +
Sbjct: 183 QPATPEELQLVHSQEYVDLMASTPQMTESERRALSDTYDSVYLHPNSFPCALLATGALLR 242
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
LVD++ + R G A++RPPGHHA + G+C+F N+AIAARYAQ H + R+ I
Sbjct: 243 LVDALMTGEIRN----GLAVVRPPGHHAQRESMNGYCMFNNIAIAARYAQERHHVARILI 298
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKIDE--VGRGDGEGSTLNLPL 193
+D+DVHHG GT F DP + S H+ +P D G G G+G T+N+P
Sbjct: 299 VDWDVHHGQGTQFIFEQDPSVLCFSVHRYELGRFWPHLEASDWRATGHGKGQGYTVNVPW 358
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G D T F V++P A F+P ++LV+AG+DA + DP + T G + A+
Sbjct: 359 NQVGMRDGDYITAFLHVLLPIALEFQPQMVLVAAGFDAMLGDPKGEMAATPGGF----AH 414
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
+ L L R + LEGGYNL+SL+ V+ + + LG+P
Sbjct: 415 LTHLLMGLAKGRLILSLEGGYNLHSLALGVSATLQTLLGDP 455
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/273 (37%), Positives = 143/273 (52%), Gaps = 21/273 (7%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y + +F + AAGA LV+++ A + + G A++RPPGHHA GFC F +
Sbjct: 619 YISPHSFCCAQLAAGAACRLVEAILAREVQN----GLAIVRPPGHHAERDAACGFCFFNS 674
Query: 120 VAIAARYAQRAHGLK-RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGT 173
VA+AAR+AQ G R+ I+D+D+HHGNGT F +DP + ++S H+ G++
Sbjct: 675 VAVAARHAQEVAGRALRILIVDWDIHHGNGTQHIFEEDPSVLYVSLHRYDHGAFFPMAED 734
Query: 174 GKIDEVGRGDGEGSTLNLPLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHV 232
G VGRG GEG +N+ G GD T H +++P A F P+L+LVSAG+DA
Sbjct: 735 GASSHVGRGQGEGFNVNVAWNGPRLGDPDYLTAMHHIVMPIAYEFNPELVLVSAGFDAAR 794
Query: 233 LDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
DPL + Y A++ L L G R LEGGYNL S+S S+A R LG+
Sbjct: 795 GDPLGGCLVSPEGY----AHMTHLLMGLAGGRIALVLEGGYNLTSISESMAACTRTLLGD 850
Query: 293 PSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
P + P P ++ V HIH
Sbjct: 851 PPPLMPWLRP------PLPGTFLSLAEVAHIHQ 877
>gi|321253099|ref|XP_003192629.1| histone deacetylase clr3 [Cryptococcus gattii WM276]
gi|317459098|gb|ADV20842.1| histone deacetylase clr3, putative [Cryptococcus gattii WM276]
Length = 734
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 129/239 (53%), Gaps = 14/239 (5%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y T + +AG I SV ++ R FA++RPPGHHA P MGFC F N
Sbjct: 151 YVCRETAHCARLSAGGVIQTCRSVCKNEVRN----AFAIVRPPGHHAEPNEHMGFCFFNN 206
Query: 120 VAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGT--G 174
VA+A R QR K+V I+D+DVHHGNGT AF+ D D+ ++S H+ YP G
Sbjct: 207 VAVATREMQREGLAKKVLILDWDVHHGNGTQRAFWHDGDVLYMSLHRHEGGTFYPNGDFG 266
Query: 175 KIDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
++ VG G+G G ++N+P PG G GD F +I+P A F PDL+++SAG+DA
Sbjct: 267 SLNMVGDGEGVGKSVNIPWPGPGFGDADYIYAFQRIIMPIAYEFNPDLVIISAGFDAADG 326
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
D L T Y ++ + L G + V LEGGYNL ++S S R LGE
Sbjct: 327 DMLGQCHVTPAAY----GHMTHMLSSLAGGKLVVALEGGYNLRAISDSALAVARVLLGE 381
>gi|291407454|ref|XP_002719913.1| PREDICTED: histone deacetylase 6-like [Oryctolagus cuniculus]
Length = 1245
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 150/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA+ ++ + H+ YV + +++ + EG+ Y +TF + A G
Sbjct: 576 PATDAELLTCHSAEYVERIRATQKMKTRE--LHREGANFDSIYICPSTFTCAQLATGTVC 633
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + G AL+RPPGHHA GFC F +VA+AAR+AQ G RV
Sbjct: 634 RLVEAVLEGEVLN----GVALVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRV 689
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYP--GTGKIDEVGRGDGEGSTLNL 191
I+D+D+HHGNGT F DDP + ++S H Q +P G ++GR G G T+N+
Sbjct: 690 LIVDWDIHHGNGTQHIFEDDPSVLYISLHRYDQGTFFPVGDEGACSQMGRAAGTGFTVNV 749
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
G GD +H +++P A F P+L+LVSAG+DA DPL Q + Y
Sbjct: 750 AWNGSRIGDADYLMAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGY---- 805
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A R+ LG+P
Sbjct: 806 AHLTHLLMGLAGGRIILILEGGYNLTSISESMAACTRSLLGDP 848
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/284 (34%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 182 AEKEELMLVHSLEYIDLMESTQYMKEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLV 241
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ HG++RV I+D
Sbjct: 242 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHGIQRVLIVD 297
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYPG--TGKIDEVGRGDGEGSTLNLPLPG 195
+D+HHG GT F DP + + S H Q +P G G G+G T+N+P
Sbjct: 298 WDIHHGQGTQFMFDQDPSVLYFSIHRYEQGRFWPHLPASNWSTTGFGQGQGYTINVPWNQ 357
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 358 VGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 413
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL SL+ V+ S LG+P E
Sbjct: 414 HLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLE 457
>gi|374849860|dbj|BAL52864.1| histone deacetylase [uncultured gamma proteobacterium]
Length = 308
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 18/264 (6%)
Query: 11 EIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESL 70
E IE + A ++ +A+VH +++ + A+ + G ++ T + +++ +L
Sbjct: 40 ENIEWRIAPCARLEQLAAVHTASHIERIYAAIPK---TGYAFLDPD--TVVSPGSWEAAL 94
Query: 71 AAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRA 130
AAGA A V++V + F +RPPGHHA MGFC+F NVAIAAR+A
Sbjct: 95 RAAGAVCAAVEAVLGGEAEN----AFCAVRPPGHHAEIGRAMGFCLFNNVAIAARHAIDR 150
Query: 131 HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLN 190
GLKRV I+DFD HHGNGT F +P + + STHQ YPGTG+ +E G G+ +N
Sbjct: 151 FGLKRVAIVDFDAHHGNGTQAIFASEPKVLYASTHQFPLYPGTGRAEETGCGN----LIN 206
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G+ R I+P F+P+LIL+SAG+DAH+ DPLASL + ++
Sbjct: 207 VPLPPGATGAHFRAQVQARILPALLGFRPELILISAGFDAHLKDPLASLCLEEADFAWIS 266
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYN 274
A + L S LEGGY+
Sbjct: 267 AQLLAFGVPLVSS-----LEGGYH 285
>gi|343496964|ref|ZP_08735049.1| putative acetylpolyamine aminohydrolase [Vibrio nigripulchritudo
ATCC 27043]
gi|342820417|gb|EGU55240.1| putative acetylpolyamine aminohydrolase [Vibrio nigripulchritudo
ATCC 27043]
Length = 374
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 13/257 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMD-RASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
PAS + VH Y++ + D + + G+ G G +Y A+ +AG +
Sbjct: 69 PASEAQLLKVHPEHYLNEFKSLSDQKGGELGLYAPFGKG-SYEIASQ------SAGLACS 121
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
VD V R + ++L RPPGHH + MGFC+F N+AIAA +A +G+ R+ +
Sbjct: 122 AVDRVM----RGEWKNAYSLSRPPGHHCLADKAMGFCLFANIAIAAEHAISEYGVNRIAV 177
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGS 197
ID+DVHHGNGT D FY D+ +S HQ G + PG +++ G G+G+G +N+PL G
Sbjct: 178 IDWDVHHGNGTQDIFYSRSDVLTISIHQQGCFPPGYSGVEDTGSGNGQGKNINVPLMPGG 237
Query: 198 GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLA 257
G + +++P +KP+LI V++GYDA +DPLA + + TY + ++A
Sbjct: 238 GHQSYLDAMENIVIPALHAYKPELIFVASGYDASGVDPLARMLAHSDTYRQMTKMTMEVA 297
Query: 258 KDLCGSRCVFFLEGGYN 274
C +R + EGGY+
Sbjct: 298 NQHCENRLIVVHEGGYS 314
>gi|409723694|ref|ZP_11270827.1| histone deacetylase superfamily protein [Halococcus hamelinensis
100A6]
gi|448721698|ref|ZP_21704241.1| histone deacetylase superfamily protein [Halococcus hamelinensis
100A6]
gi|445790770|gb|EMA41420.1| histone deacetylase superfamily protein [Halococcus hamelinensis
100A6]
Length = 336
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 149/279 (53%), Gaps = 10/279 (3%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+E + P + + VH YV+ + D Q T A T++ + +
Sbjct: 38 VEYVDADPITAEAARRVHDDDYVTEFREFCDSGGGQW------DPDTVAVEATWEAACKS 91
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG + + A D P F+L RPPGHHA+ MGFC F N A+AA+ A G
Sbjct: 92 AGLAVWAAEEAVAGATGRDTP--FSLGRPPGHHAVADDAMGFCFFNNAAVAAQ-ATLDDG 148
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLP 192
L RV +ID+DVHHGNGT D FYD D+ + S H+ G YPGTG +DE G G+G G+T+N+P
Sbjct: 149 LDRVAVIDWDVHHGNGTQDIFYDRGDVCYCSIHEHGLYPGTGTVDETGAGEGTGTTVNIP 208
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
GSGD A P F PDL+L+SAG+DAHV DP++ + +T Y +LAA
Sbjct: 209 FRAGSGDAAYVEALETAFAPVLAGFDPDLLLISAGFDAHVNDPISRMSVSTEGYGVLAAR 268
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG 291
+ LA D + F LEGGY L +++ V + F G
Sbjct: 269 ARSLA-DRLDAALGFVLEGGYGLETIADGVEMTNEVFDG 306
>gi|116051799|ref|YP_789359.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172974|ref|ZP_15630729.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CI27]
gi|115587020|gb|ABJ13035.1| putative deacetylase [Pseudomonas aeruginosa UCBPP-PA14]
gi|404536645|gb|EKA46281.1| acetylpolyamine aminohydrolase [Pseudomonas aeruginosa CI27]
Length = 380
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 160/301 (53%), Gaps = 27/301 (8%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
++L++ PAS +D+ VH Y+ KA+ A + GP +++ + +
Sbjct: 62 LQLRSAPPASDEDLLRVHPAHYLERF-KALSDAGGGSLGQDAPIGPG-----SYEIARLS 115
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
AG IA +D V A + ++L RPPGHH +P MGFC F N+A+A A+ HG
Sbjct: 116 AGLAIAALDVVLAGEADN----AYSLSRPPGHHCLPDQAMGFCFFANIAVAIEAAKARHG 171
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV ++D+DVHHGNGT +Y D+ +S HQDG + PG +++G G G LN+
Sbjct: 172 VERVAVLDWDVHHGNGTQAIYYRRDDVLSISLHQDGCFPPGYSGAEDIGEDRGRGFNLNV 231
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G G A +++P +RF+P LI+V++G+DA+ +DPLA +Q + ++ + A
Sbjct: 232 PLLPGGGHDAYMQAMQRIVLPALERFRPQLIVVASGFDANAVDPLARMQLHSDSFRAMTA 291
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN--------------LNSLSYSVADSFRAF--LGEPSK 295
++ A+ R V EGGY+ L+ + +V D R F L +P+
Sbjct: 292 MVRDAAERHADGRLVVVHEGGYSEAYVPFCGLAVIEELSGVRSAVRDPLRDFIELQQPNA 351
Query: 296 A 296
A
Sbjct: 352 A 352
>gi|254460169|ref|ZP_05073585.1| histone deacetylase family protein [Rhodobacterales bacterium
HTCC2083]
gi|206676758|gb|EDZ41245.1| histone deacetylase family protein [Rhodobacteraceae bacterium
HTCC2083]
gi|297184466|gb|ADI20581.1| hypothetical protein [uncultured alpha proteobacterium
EB080_L84F03]
Length = 370
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 161/301 (53%), Gaps = 13/301 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQ-GIILIEGSGPTYATATTFQESLA 71
+ ++ +PAS +D+ VH +Y+ ++ D + G G G Y A T
Sbjct: 60 LAMQGATPASREDLLRVHPASYLDAFKEMSDTGGGEIGERCPFGPG-GYDIAAT------ 112
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
+AG A +++V + + ++L RPPGHH +P+ PMGFC+ N++IA A
Sbjct: 113 SAGLAKAALEAVLKGELQN----AYSLSRPPGHHCLPEQPMGFCLLANISIAIESALAKG 168
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG-TGKIDEVGRGDGEGSTLN 190
KRV +ID+DVHHGNGT +YD D+ +S HQ+ ++P T ++ G+G GEG LN
Sbjct: 169 LAKRVAVIDWDVHHGNGTEAIYYDRGDVLTISIHQENNFPPVTSGFEDRGKGAGEGCNLN 228
Query: 191 LPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
+PLP G+G + V +++P + ++PD+I+V+ G+DA +DPLA + T T+ L
Sbjct: 229 VPLPPGAGHASYLEVMETIVIPQMRAYQPDVIIVACGFDATSVDPLARMMATADTFRQLT 288
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPS 310
+ LA ++C R + EGGY+ + + + G +A++ P L +P
Sbjct: 289 RQVMTLADEICEGRVMMAHEGGYSEVYVPFCGHAVLQEMSGSRIEAADPMAPLNLVRQPG 348
Query: 311 A 311
A
Sbjct: 349 A 349
>gi|357116448|ref|XP_003559993.1| PREDICTED: histone deacetylase 5-like [Brachypodium distachyon]
Length = 709
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/304 (36%), Positives = 155/304 (50%), Gaps = 23/304 (7%)
Query: 26 IASVHARAYVSGLEKAMDRA-SQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
IASVH+ +V ++ + + + L Y + + + AAG+ I + + VA
Sbjct: 78 IASVHSSTHVKLMKSISSKEHNYRRKNLASNYNSIYFNEGSSESAFLAAGSVIEVAEKVA 137
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH---GLKRVFIIDF 141
A + AL+RPPGHHA PMGFC+F NVAIAA Y G+K++ I+D+
Sbjct: 138 AGELSS----AIALVRPPGHHAEHNEPMGFCLFNNVAIAANYLLNERPDLGIKKILIVDW 193
Query: 142 DVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGTGKIDE--VGRGDGEGSTLNLPLP-G 195
DVHHGNGT FY+D + F S H+ YP G +G GDG+G +N+P G
Sbjct: 194 DVHHGNGTQKMFYNDSRVLFFSVHRFDHGAFYPSQGDASHCFIGEGDGQGYNINVPWNHG 253
Query: 196 GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQ 255
G GD + V++P A+ F PD+IL+SAG+DA DPL T Y L +
Sbjct: 254 GCGDADYIAAWDHVLLPVAEAFDPDIILLSAGFDAARGDPLGGCDVTPDGYARLLTKLLG 313
Query: 256 LAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE-----PSKASEFDNPAILYEEPS 310
AK R V LEGGYN S++ SV + LG+ P K S FD+ + +E
Sbjct: 314 FAK----GRMVMALEGGYNTVSIANSVLFCAKVLLGDQFRLKPPKDSPFDSTWNVIKEVR 369
Query: 311 AKVK 314
++K
Sbjct: 370 DELK 373
>gi|332705054|ref|ZP_08425139.1| putative deacetylase [Moorea producens 3L]
gi|332356231|gb|EGJ35686.1| putative deacetylase [Moorea producens 3L]
Length = 305
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 142/265 (53%), Gaps = 19/265 (7%)
Query: 26 IASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVAA 85
+ +H++ Y+ +EK A G L +G + ++ +L A A + VD V
Sbjct: 59 VQQIHSQRYIETVEKI---ARSNGGRLDADTG---ISPRSYDVALLAVSAWLDAVDQVLT 112
Query: 86 SKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHH 145
+ N F L RPPGHHA + MGFC+F N AIAA YA ++RV I+D+DVHH
Sbjct: 113 TNNS-----AFVLARPPGHHAERQRGMGFCLFSNAAIAAYYALEQSEVERVAILDWDVHH 167
Query: 146 GNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
GNGT D D I ++S HQ YPGTG+ E G + LNLP+ GS + +
Sbjct: 168 GNGTQDVVERDARIAYISLHQSPCYPGTGQASEQG---FHNNVLNLPMAPGSTLADYQPM 224
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
F + ++P +F+PDL++VSAGYDA+ DPLA++ Y + QL + R
Sbjct: 225 FEQKVMPFLTKFQPDLLIVSAGYDANAADPLANIALQPDDYGLFTNYCLQLTR-----RI 279
Query: 266 VFFLEGGYNLNSLSYSVADSFRAFL 290
VF LEGGY L +L+ SV + A L
Sbjct: 280 VFGLEGGYELTALAQSVLATIEACL 304
>gi|193885226|pdb|2VQQ|A Chain A, Structure Of Hdac4 Catalytic Domain (A Double Cysteine-To-
Alanine Mutant) Bound To A Trifluoromethylketone
Inhbitor
gi|193885227|pdb|2VQQ|B Chain B, Structure Of Hdac4 Catalytic Domain (A Double Cysteine-To-
Alanine Mutant) Bound To A Trifluoromethylketone
Inhbitor
Length = 413
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 130 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 185
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 186 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 245
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 246 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 304
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGG++L ++ + A LG +E D
Sbjct: 305 SARCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 355
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 356 LPEKVLQQRPNANAVRSMEKVMEIHS 381
>gi|167581566|ref|ZP_02374440.1| histone deacetylase family, putative [Burkholderia thailandensis
TXDOH]
Length = 369
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 139/263 (52%), Gaps = 11/263 (4%)
Query: 13 IELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAA 72
+++ + PA+ DD+ +H Y+ ++A D G G A + S
Sbjct: 61 LDMSSAPPATDDDLLRIHPAHYLEAFKRASD----------TGGGDLGELAPFGRGSYEI 110
Query: 73 AGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHG 132
A L + + F+L RPPGHH + PMGFC+ N+ IA A+ H
Sbjct: 111 AALSAGLALAAVDAVLAERAANAFSLSRPPGHHCLRDKPMGFCLLANIPIAIEAARAKHR 170
Query: 133 LKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNL 191
++RV +ID+DVHHGNGT +YDD D +S HQD + PG DE G G G G+ +N+
Sbjct: 171 VERVAVIDWDVHHGNGTQAIYYDDADTLTISLHQDRCFPPGYSGADERGAGAGVGANINV 230
Query: 192 PLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAA 251
PL G+GD A R F +++P F+P+L++V++G DA+ +DPLA +Q + +Y +
Sbjct: 231 PLLAGAGDDAYRYAFERIVLPALDAFRPELVVVASGLDANAVDPLARMQLHSDSYRFMTH 290
Query: 252 NIKQLAKDLCGSRCVFFLEGGYN 274
+K A+ C R V EGGY+
Sbjct: 291 ALKAAAQRHCAGRLVVVHEGGYS 313
>gi|307104681|gb|EFN52933.1| hypothetical protein CHLNCDRAFT_137274 [Chlorella variabilis]
Length = 315
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 97/143 (67%), Gaps = 10/143 (6%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGL----------KRVFIIDFDVH 144
GF++ RPPGHHA P MGFC+ N A+AAR+AQRAHGL +RV ++D+DVH
Sbjct: 169 GFSICRPPGHHATPGDQMGFCLLNNAALAARHAQRAHGLHKASACICMQRRVLVLDWDVH 228
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRT 204
HGNGT D F+ DP + L HQ+G +PG+G +E G G G+T+N+PLP SG A +
Sbjct: 229 HGNGTQDCFWADPSVLLLDLHQEGVWPGSGAAEEAEAGPGAGATINVPLPWHSGHAAAQL 288
Query: 205 VFHEVIVPCAQRFKPDLILVSAG 227
F +V+ P A RF+PDLI+VSAG
Sbjct: 289 AFEQVVAPAASRFRPDLIIVSAG 311
>gi|4754907|gb|AAD29046.1|AF132607_1 histone deacetylase 4 [Homo sapiens]
Length = 1084
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 145/268 (54%), Gaps = 30/268 (11%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G + LV VA KN GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 774 AVGCVVELVFKVATGELKN------GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ 827
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 828 RLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVG 887
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
+N+ GG GD F V++P A F PD++LVS+G+DA P
Sbjct: 888 FNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTP----- 942
Query: 243 TGTYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
G Y + A L K L G R V LEGG++L ++ + A LG +E
Sbjct: 943 LGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NEL 997
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D +L + P+A +++E+V IHS
Sbjct: 998 DPLPEKVLQQRPNANAVRSMEKVMEIHS 1025
>gi|221044224|dbj|BAH13789.1| unnamed protein product [Homo sapiens]
Length = 668
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 145/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 358 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 413
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 414 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 473
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GD F V++P A F PD++LVS+G+DA P G
Sbjct: 474 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTP-----LG 528
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
Y + A L K L G R V LEGG++L ++ + A LG +E D
Sbjct: 529 GYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 583
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 584 LPEKVLQQRPNANAVRSMEKVMEIHS 609
>gi|153085395|ref|NP_006028.2| histone deacetylase 4 [Homo sapiens]
gi|259016348|sp|P56524.3|HDAC4_HUMAN RecName: Full=Histone deacetylase 4; Short=HD4
gi|119591572|gb|EAW71166.1| histone deacetylase 4, isoform CRA_b [Homo sapiens]
gi|168272944|dbj|BAG10311.1| histone deacetylase 4 [synthetic construct]
Length = 1084
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 145/268 (54%), Gaps = 30/268 (11%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G + LV VA KN GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 774 AVGCVVELVFKVATGELKN------GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ 827
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 828 RLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVG 887
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
+N+ GG GD F V++P A F PD++LVS+G+DA P
Sbjct: 888 FNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTP----- 942
Query: 243 TGTYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
G Y + A L K L G R V LEGG++L ++ + A LG +E
Sbjct: 943 LGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NEL 997
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D +L + P+A +++E+V IHS
Sbjct: 998 DPLPEKVLQQRPNANAVRSMEKVMEIHS 1025
>gi|193885222|pdb|2VQJ|A Chain A, Structure Of Hdac4 Catalytic Domain Bound To A
Trifluoromethylketone Inhbitor
gi|193885223|pdb|2VQM|A Chain A, Structure Of Hdac4 Catalytic Domain Bound To A Hydroxamic
Acid Inhbitor
Length = 413
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 130 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 185
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 186 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 245
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 246 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 304
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGG++L ++ + A LG +E D
Sbjct: 305 SARCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 355
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 356 LPEKVLQQRPNANAVRSMEKVMEIHS 381
>gi|25058273|gb|AAH39904.1| HDAC4 protein [Homo sapiens]
gi|119591571|gb|EAW71165.1| histone deacetylase 4, isoform CRA_a [Homo sapiens]
Length = 972
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 146/266 (54%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 662 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 717
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 718 SVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 777
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 778 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 836
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
+ + L + LA G R V LEGG++L ++ + A LG +E D
Sbjct: 837 SARCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLG-----NELDP 887
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + P+A +++E+V IHS
Sbjct: 888 LPEKVLQQRPNANAVRSMEKVMEIHS 913
>gi|149037568|gb|EDL91999.1| histone deacetylase 4 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 1055
Score = 168 bits (426), Expect = 3e-39, Method: Composition-based stats.
Identities = 102/267 (38%), Positives = 147/267 (55%), Gaps = 28/267 (10%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 745 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 800
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 801 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 860
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 861 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 919
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG---EPSKASE 298
+ + L + LA G R V LEGG++L ++ + A LG EP
Sbjct: 920 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEK- 974
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 975 -----VLHQRPNANAVHSMEKVMGIHS 996
>gi|6635127|dbj|BAA22957.2| KIAA0288 protein [Homo sapiens]
Length = 1097
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 145/268 (54%), Gaps = 30/268 (11%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G + LV VA KN GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 787 AVGCVVELVFKVATGELKN------GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ 840
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 841 RLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVG 900
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
+N+ GG GD F V++P A F PD++LVS+G+DA P
Sbjct: 901 FNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTP----- 955
Query: 243 TGTYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
G Y + A L K L G R V LEGG++L ++ + A LG +E
Sbjct: 956 LGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NEL 1010
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D +L + P+A +++E+V IHS
Sbjct: 1011 DPLPEKVLQQRPNANAVRSMEKVMEIHS 1038
>gi|385653531|ref|ZP_10048084.1| histone deacetylase superfamily protein [Leucobacter
chromiiresistens JG 31]
Length = 377
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 111/180 (61%), Gaps = 1/180 (0%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+AL+RPPGHHA P G+C+F N+ +A + A ++RV I D+DVHHGNG ++D
Sbjct: 133 YALVRPPGHHAEPDQGRGYCLFANIPVAIEALRAAGRVRRVAIFDYDVHHGNGAQKIYWD 192
Query: 156 DPDIFFLSTHQDGSYP-GTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
DPD+ +S HQD +P +G +DE G G G G+ +N+PLP GSGD A + EV P
Sbjct: 193 DPDVLTISVHQDRLFPVDSGLVDEQGAGAGAGTNINVPLPAGSGDGAYWSTVDEVARPAI 252
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
F PDLILVS+G+D LDPL + T+ + +A + +A + C R VF EGGY+
Sbjct: 253 TAFAPDLILVSSGFDPSALDPLGRMSVTSEGFRGIAERLLDIADEACDGRIVFSHEGGYS 312
>gi|333925437|ref|YP_004499016.1| histone deacetylase superfamily protein [Serratia sp. AS12]
gi|333930390|ref|YP_004503968.1| histone deacetylase superfamily protein [Serratia plymuthica AS9]
gi|386327261|ref|YP_006023431.1| histone deacetylase superfamily protein [Serratia sp. AS13]
gi|333471997|gb|AEF43707.1| histone deacetylase superfamily [Serratia plymuthica AS9]
gi|333489497|gb|AEF48659.1| histone deacetylase superfamily [Serratia sp. AS12]
gi|333959594|gb|AEG26367.1| histone deacetylase superfamily [Serratia sp. AS13]
Length = 370
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 150/268 (55%), Gaps = 17/268 (6%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS--GPTYATATTFQ 67
S + L++ A+ +D+ +H Y+ ++ D G +L E + GP +++
Sbjct: 59 SRRLRLQSAELATDEDLLRIHPAGYLQRFKQLSDNG---GGMLGEEAPLGPG-----SYE 110
Query: 68 ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
+ +AG A V++V + +AL RPPGHH +P MGFC N+ IA A
Sbjct: 111 IAKLSAGLACAAVEAVLQGELDN----AYALSRPPGHHCLPDQSMGFCFLANIPIAIERA 166
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPG--TGKIDEVGRGDGE 185
+ +GL +V ++D+DVHHGNGT ++ D+ LS HQDG +P +G+ D G G GE
Sbjct: 167 KAQYGLGKVAVLDWDVHHGNGTQHIYWQRDDVLTLSLHQDGCFPAGYSGEQDR-GAGAGE 225
Query: 186 GSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGT 245
G +N+PL G+GD ++++P ++F+P+LI+++ GYDA+ +DPLA +Q + +
Sbjct: 226 GCNINIPLLAGTGDDGYLYALRQIVIPALEQFQPELIIIACGYDANAIDPLARMQLHSDS 285
Query: 246 YYMLAANIKQLAKDLCGSRCVFFLEGGY 273
+ + A ++ A LCG + V EGGY
Sbjct: 286 FRSMTALVQDAADRLCGGKLVMVHEGGY 313
>gi|119505724|ref|ZP_01627793.1| histone deacetylase/AcuC/AphA family protein [marine gamma
proteobacterium HTCC2080]
gi|119458434|gb|EAW39540.1| histone deacetylase/AcuC/AphA family protein [marine gamma
proteobacterium HTCC2080]
Length = 370
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
+AL+RPPGHHAI MGFC+FGN IA +A G+ R+ +D+DVHHGNGT AFYD
Sbjct: 134 YALVRPPGHHAIAGEGMGFCIFGNATIAGFHALETLGVNRIAYVDWDVHHGNGTQSAFYD 193
Query: 156 DPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCA 214
D +S HQD + P +G + EVG G GEG +N+PLP GSG A VF ++++P
Sbjct: 194 DARALTISVHQDNCFPPDSGHVHEVGEGAGEGYNINIPLPPGSGVGAYEAVFDQLVIPAL 253
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
+ P+LI+V +G+DA DPL +Q + Y L + A C + + EGGYN
Sbjct: 254 DAYGPELIIVPSGFDAGAYDPLGRMQMHSEGYRSLTEKLLSAADRHCQGKILMTHEGGYN 313
Query: 275 LNSLSYSVADSFRAFLGEPSKASEFDNP---AILYEEPSAKVKQAIERVK 321
++ + A G ++ + P + +E + AI+RVK
Sbjct: 314 SWTVPFFGLAVMEALSGHRTETEDPFLPLHAGLGGQELQPHQQSAIDRVK 363
>gi|62702143|gb|AAX93070.1| unknown [Homo sapiens]
Length = 1052
Score = 168 bits (426), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 145/268 (54%), Gaps = 30/268 (11%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G + LV VA KN GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 742 AVGCVVELVFKVATGELKN------GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ 795
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 796 RLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVG 855
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
+N+ GG GD F V++P A F PD++LVS+G+DA P
Sbjct: 856 FNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTP----- 910
Query: 243 TGTYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
G Y + A L K L G R V LEGG++L ++ + A LG +E
Sbjct: 911 LGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NEL 965
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D +L + P+A +++E+V IHS
Sbjct: 966 DPLPEKVLQQRPNANAVRSMEKVMEIHS 993
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,576,618,068
Number of Sequences: 23463169
Number of extensions: 259825203
Number of successful extensions: 601376
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5864
Number of HSP's successfully gapped in prelim test: 283
Number of HSP's that attempted gapping in prelim test: 582567
Number of HSP's gapped (non-prelim): 6893
length of query: 326
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 184
effective length of database: 9,027,425,369
effective search space: 1661046267896
effective search space used: 1661046267896
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)