BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020411
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q941D6|HDA14_ARATH Histone deacetylase 14 OS=Arabidopsis thaliana GN=HDA14 PE=2 SV=1
Length = 423
Score = 542 bits (1396), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/326 (79%), Positives = 290/326 (88%), Gaps = 1/326 (0%)
Query: 2 ELTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYA 61
ELT +FRGS+I+EL NF A+V+DIA+VH +AYV GLEKAMD AS G+I IEGSGPTYA
Sbjct: 98 ELTPKFRGSQILELANFKTATVEDIANVHDKAYVFGLEKAMDEASDSGLIFIEGSGPTYA 157
Query: 62 TATTFQESLAAAGAGIALVDSV-AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
T+TTFQ+SL AAGAG+ALVDSV AAS+N DPP+GFALIRPPGHHA+PKGPMGFCVFGNV
Sbjct: 158 TSTTFQDSLIAAGAGMALVDSVIAASRNSVDPPIGFALIRPPGHHAVPKGPMGFCVFGNV 217
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVG 180
AIAAR+AQR HGLKR+FIIDFDVHHGNGTNDAF +DPDIFFLSTHQDGSYPGTGKI ++G
Sbjct: 218 AIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLSTHQDGSYPGTGKISDIG 277
Query: 181 RGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQ 240
+G GEG+TLNLPLPGGSGD AMRTVF E+IVPCAQRFKPD+ILVSAGYDAHVLDPLA+LQ
Sbjct: 278 KGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDIILVSAGYDAHVLDPLANLQ 337
Query: 241 FTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD 300
FTT TYY LA +IK+LAK++CG RCVFFLEGGYNL SLS SVADSFRA LGE S ASEFD
Sbjct: 338 FTTATYYSLAKDIKRLAKEVCGGRCVFFLEGGYNLESLSSSVADSFRALLGEDSLASEFD 397
Query: 301 NPAILYEEPSAKVKQAIERVKHIHSL 326
NPA LY+EP KV+ AI+R K IH L
Sbjct: 398 NPAYLYDEPMRKVRDAIQRAKSIHCL 423
>sp|O30107|Y130_ARCFU Uncharacterized protein AF_0130 OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=AF_0130 PE=3 SV=1
Length = 359
Score = 199 bits (505), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 171/326 (52%), Gaps = 20/326 (6%)
Query: 7 FRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTF 66
F I+ L+ F AS++D+ VH YV LE + + GII + + P F
Sbjct: 40 FESERIVLLEPFK-ASLEDVLEVHTEEYVRFLEM---ESKKGGIIDFDTNIPV----GVF 91
Query: 67 QESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARY 126
+L AAG I +V + FA+IRPPGHHA P GFC N+AI ++
Sbjct: 92 DRALLAAGGAIRAAQAVLNKECEN----AFAMIRPPGHHAKPYIGAGFCYLNNMAIMVKW 147
Query: 127 AQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGDGEG 186
+ G +R+ I+D+D HHG+GT + FY+D + F+STHQ YPGTG +E G G GEG
Sbjct: 148 LLK-QGFERIAILDWDAHHGDGTQEIFYNDDRVLFISTHQMPLYPGTGYPEECGTGKGEG 206
Query: 187 STLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTY 246
T+N+PLP G+GD V E+I P FKP I +SAG D H DP+ SL T Y
Sbjct: 207 YTVNIPLPPGTGDEGYMMVIDEIIEPVVNEFKPQFIAISAGQDNHFTDPITSLALTARGY 266
Query: 247 YMLAANIKQLAKDLCGSRCVFFLEGGYNLN-SLSYSVADSFRAFLG-EPSKASEFDN--P 302
+ +A+ C R V LEGGY++ +L Y+ A G + S E +N P
Sbjct: 267 AEMMRRAVAMAEKHCDGRLVAVLEGGYSVEGALPYTNLGIIAAMAGFDLSAIREPENYLP 326
Query: 303 AILYEEPSA---KVKQAIERVKHIHS 325
+L+ + + K+K IE VK +HS
Sbjct: 327 ELLWRKRDSALVKLKHNIEDVKRVHS 352
>sp|Q20296|HDA6_CAEEL Histone deacetylase 6 OS=Caenorhabditis elegans GN=hda-6 PE=2 SV=2
Length = 955
Score = 181 bits (458), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/232 (41%), Positives = 136/232 (58%), Gaps = 20/232 (8%)
Query: 60 YATATTFQESLAAAGAGIALVDSV----AASKNRPDPPLGFALIRPPGHHAIPKGPMGFC 115
Y T T + + A GA + VD + A +N ++RPPGHHA GFC
Sbjct: 518 YLTRDTLKVARKAVGAVLQSVDEIFEKDAGQRN------ALVIVRPPGHHASASKSSGFC 571
Query: 116 VFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSYPGT 173
+F NVA+AA+YAQR H KRV I+D+DVHHGNGT + FY+D ++ ++S H+ G++
Sbjct: 572 IFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMSIHRHDKGNFYPI 631
Query: 174 GK---IDEVGRGDGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYD 229
G+ +VG G GEG ++N+P G GD + F VI+P A +F PDL+L+SAG+D
Sbjct: 632 GEPKDYSDVGEGAGEGMSVNVPFSGVQMGDNEYQMAFQRVIMPIAYQFNPDLVLISAGFD 691
Query: 230 AHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
A V DPL + T T+ ++ + LA G R + LEGGYNL S+S S
Sbjct: 692 AAVDDPLGEYKVTPETFALMTYQLSSLA----GGRIITVLEGGYNLTSISNS 739
Score = 147 bits (370), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 145/301 (48%), Gaps = 19/301 (6%)
Query: 1 MELTSEFRGSEIIE----LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS 56
+++ ++I+E L NF D+ H ++ V L ++ + + I
Sbjct: 42 LKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQED----INSQ 97
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
Y + + S+ A G+A V + + GFA++RPPGHHA P GFC+
Sbjct: 98 CEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHHADSVSPCGFCL 157
Query: 117 FGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPG- 172
F NVA AA A + G +R+ I+D DVHHG+GT FYDD + + S H+ +P
Sbjct: 158 FNNVAQAAEEAFFS-GAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHRHEHGLFWPHL 216
Query: 173 -TGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
D +G G G G NL L G D+ ++ V++P A +F P +++SAG+DA
Sbjct: 217 PESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPHFVIISAGFDA 276
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ DPL + T Y + ++K LA+ R + LEGGYN + +V R L
Sbjct: 277 LLGDPLGGMCLTPDGYSHILYHLKSLAQ----GRMLVVLEGGYNHQISAVAVQRCVRVLL 332
Query: 291 G 291
G
Sbjct: 333 G 333
>sp|O27262|Y1194_METTH Uncharacterized protein MTH_1194 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1194 PE=3 SV=1
Length = 331
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 155/289 (53%), Gaps = 26/289 (8%)
Query: 13 IELKNFSP-------ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATT 65
IE + SP A +DDI VH+ +V LE R G + + TY T +
Sbjct: 31 IESSDLSPRFVEPGMAGIDDILMVHSSTHVEYLEVFAGRGG--GWLDYD----TYMTPES 84
Query: 66 FQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR 125
F S+A AG A++ + A ++ ++L RPPGHHA MGFC+F N+AIA
Sbjct: 85 F--SVARLSAGGAMLAAEEALRD----GWSYSLGRPPGHHATYDRSMGFCIFNNIAIAIE 138
Query: 126 YAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS--YPGTGKIDEVGRGD 183
+A+R G+ R ++DFDVHHGNGT+ FY D D+ ++S HQD +PGTG IDE G G+
Sbjct: 139 HARRNLGVSRPLVLDFDVHHGNGTSSIFYRDRDVMYISIHQDPRTLFPGTGFIDETGSGE 198
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
GEG LN+P+P GSG+ + ++ + F+PD+I VSAG+DAH DPLA +
Sbjct: 199 GEGFNLNIPMPRGSGNREYLWILGMILPAVLEGFRPDMIFVSAGFDAHRRDPLAEIMVDE 258
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGE 292
+ + I Q G C LEGGY+ +L S R GE
Sbjct: 259 EFFSWIGWFIHQ-----TGLPCTAVLEGGYDPEALGRSNIAFMRGLDGE 302
>sp|Q6P3E7|HDA10_MOUSE Histone deacetylase 10 OS=Mus musculus GN=Hdac10 PE=2 SV=2
Length = 666
Score = 180 bits (456), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 158/282 (56%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ Y++ ++K ++ L + Y TF + AAGA + LV
Sbjct: 55 ASEEELGLVHSPEYIALVQKTQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A N G AL+RPPGHH+ GFCVF NVA+AA++A++ +GL+R+ I
Sbjct: 115 DAVLTGAVHN------GLALVRPPGHHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILI 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H + GS+ D VG+G G+G T+NLP
Sbjct: 169 VDWDVHHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F V++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + LG+P+
Sbjct: 285 LTQLLQVLAGGRICAVLEGGYHLESLAQSVCMMVQTLLGDPT 326
>sp|Q969S8|HDA10_HUMAN Histone deacetylase 10 OS=Homo sapiens GN=HDAC10 PE=1 SV=1
Length = 669
Score = 178 bits (452), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 18/282 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
AS +++ VH+ YVS + + ++ L Y +TF + AAGAG+ LV
Sbjct: 55 ASEEELGLVHSPEYVSLVRETQVLGKEELQALSGQFDAIYFHPSTFHCARLAAGAGLQLV 114
Query: 81 DSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D+V A +N G AL+RPPGHH GFCVF NVAIAA +A++ HGL R+ +
Sbjct: 115 DAVLTGAVQN------GLALVRPPGHHGQRAAANGFCVFNNVAIAAAHAKQKHGLHRILV 168
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHG G F DDP + + S H+ + D VGRG G G T+NLP
Sbjct: 169 VDWDVHHGQGIQYLFEDDPSVLYFSWHRYEHGRFWPFLRESDADAVGRGQGLGFTVNLPW 228
Query: 194 PG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G G+ F +++P A F P+L+LVSAG+D+ + DP +Q T + A+
Sbjct: 229 NQVGMGNADYVAAFLHLLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQATPECF----AH 284
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPS 294
+ QL + L G R LEGGY+L SL+ SV + + LG+P+
Sbjct: 285 LTQLLQVLAGGRVCAVLEGGYHLESLAESVCMTVQTLLGDPA 326
>sp|P53973|HDA1_YEAST Histone deacetylase HDA1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HDA1 PE=1 SV=1
Length = 706
Score = 174 bits (442), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 165/313 (52%), Gaps = 21/313 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A+ ++I VH + ++ +E + ++ + E Y ++ + G I
Sbjct: 126 ATSEEILEVHTKEHLEFIESTEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH--GLKRVFI 138
+V + + A++RPPGHHA P+ GFC+F NVA+AA+ + + ++R+ I
Sbjct: 186 KAVVEGRVKN----SLAVVRPPGHHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYPGT--GKIDEVGRGDGEGSTLNLPL 193
+D+D+HHGNGT +FY D + ++S H+ YPGT G+ D+ G G GEG N+
Sbjct: 242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301
Query: 194 P-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
P GG GD F +V++P + FKPDL+++S+G+DA D + T Y +
Sbjct: 302 PVGGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTHM 361
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAK 312
+K LA+ G+ CV LEGGYNL++++ S + +GEP E +P +P +
Sbjct: 362 LKSLAR---GNLCV-VLEGGYNLDAIARSALSVAKVLIGEP--PDELPDPL---SDPKPE 412
Query: 313 VKQAIERVKHIHS 325
V + I++V + S
Sbjct: 413 VIEMIDKVIRLQS 425
>sp|P83038|HDAC4_CHICK Histone deacetylase 4 OS=Gallus gallus GN=HDAC4 PE=2 SV=1
Length = 1080
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/266 (39%), Positives = 147/266 (55%), Gaps = 26/266 (9%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 770 AVGCVIELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 825
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 826 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFN 885
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+N+ GG GDT T F V++P A F PD++LVS+G+DA P G
Sbjct: 886 VNMAFTGGLDPPMGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTP-----LG 940
Query: 245 TYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFD- 300
Y + A L K L G R V LEGG++L ++ + A LG +E D
Sbjct: 941 GYNLSAKCFGYLTKQLMGLAGGRVVLALEGGHDLTAICDASEACVSALLG-----NELDP 995
Query: 301 -NPAILYEEPSAKVKQAIERVKHIHS 325
+L + +A ++E+V IHS
Sbjct: 996 LPEKVLQQRANANAVHSMEKVIEIHS 1021
>sp|Q70I53|HDAH_ALCSD Histone deacetylase-like amidohydrolase OS=Alcaligenes sp. (strain
DSM 11172) GN=hdaH PE=1 SV=3
Length = 369
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 147/279 (52%), Gaps = 12/279 (4%)
Query: 25 DIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALVDSVA 84
DI H+ A++ + M R S G G T + + +AG + L VA
Sbjct: 71 DILRAHSAAHL----ENMKRVSNLPTGGDTGDGITMMGNGGLEIARLSAGGAVELTRRVA 126
Query: 85 ASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVH 144
+ G+AL+ PPGHHA MGFC+F N ++AA YA+ G++RV I+D+DVH
Sbjct: 127 TGELSA----GYALVNPPGHHAPHNAAMGFCIFNNTSVAAGYARAVLGMERVAILDWDVH 182
Query: 145 HGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMR 203
HGNGT D +++DP + +S HQ + P +G E G G+G G +N+PLP GSG+ A
Sbjct: 183 HGNGTQDIWWNDPSVLTISLHQHLCFPPDSGYSTERGAGNGHGYNINVPLPPGSGNAAYL 242
Query: 204 TVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGS 263
+V++ + ++P LI+V +G+DA +LDPLA + T + +A A D+C
Sbjct: 243 HAMDQVVLHALRAYRPQLIIVGSGFDASMLDPLARMMVTADGFRQMARRTIDCAADICDG 302
Query: 264 RCVFFLEGGYNLNSLSY---SVADSFRAFLGEPSKASEF 299
R VF EGGY+ + L + +V + P EF
Sbjct: 303 RIVFVQEGGYSPHYLPFCGLAVIEELTGVRSLPDPYHEF 341
>sp|Q9Z2V5|HDAC6_MOUSE Histone deacetylase 6 OS=Mus musculus GN=Hdac6 PE=1 SV=3
Length = 1149
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 152/283 (53%), Gaps = 19/283 (6%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSG--PTYATATTFQESLAAAGAGI 77
PA ++ + H+ YV L ++ + EG+ Y +TF + A GA
Sbjct: 529 PALDSELLTCHSAEYVEHLRTTEKMKTRD--LHREGANFDSIYICPSTFACAKLATGAAC 586
Query: 78 ALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RV 136
LV++V + + G A++RPPGHHA P GFC F +VA+AAR+AQ G R+
Sbjct: 587 RLVEAVLSGEVLN----GIAVVRPPGHHAEPNAACGFCFFNSVAVAARHAQIIAGRALRI 642
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNL 191
I+D+DVHHGNGT F DDP + ++S H+ G++ G +VGR G G T+N+
Sbjct: 643 LIVDWDVHHGNGTQHIFEDDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNV 702
Query: 192 PLPGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD +H +++P A F P+L+L+SAG+DA DPL Q T Y
Sbjct: 703 PWNGPRMGDADYLAAWHRLVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGY---- 758
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ L L G R + LEGGYNL S+S S+A + LG+P
Sbjct: 759 AHLTHLLMGLAGGRIILILEGGYNLASISESMAACTHSLLGDP 801
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/284 (33%), Positives = 147/284 (51%), Gaps = 14/284 (4%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L E Y ++ + A G+ + LV
Sbjct: 135 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVLRLV 194
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D++ ++ R G A+IRPPGHHA G+C+F ++A+AARYAQ+ H ++RV I+D
Sbjct: 195 DALMGAEIRN----GMAVIRPPGHHAQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVD 250
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH--QDGSYP---GTGKIDEVGRGDGEGSTLNLPL-P 194
+DVHHG GT F DP + + S H + G + +G G G+G T+N+P
Sbjct: 251 WDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQ 310
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F +++P A F+P L+LV+AG+DA DP + T + A++
Sbjct: 311 TGMRDADYIAAFLHILLPVASEFQPQLVLVAAGFDALHGDPKGEMAATPAGF----AHLT 366
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASE 298
L L G + + LEGGYNL +L+ V+ S LG+P E
Sbjct: 367 HLLMGLAGGKLILSLEGGYNLRALAKGVSASLHTLLGDPCPMLE 410
>sp|P56524|HDAC4_HUMAN Histone deacetylase 4 OS=Homo sapiens GN=HDAC4 PE=1 SV=3
Length = 1084
Score = 168 bits (426), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 145/268 (54%), Gaps = 30/268 (11%)
Query: 72 AAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G + LV VA KN GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 774 AVGCVVELVFKVATGELKN------GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQ 827
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEG 186
+ ++ I+D+DVHHGNGT AFY DP + ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 828 RLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVG 887
Query: 187 STLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
+N+ GG GD F V++P A F PD++LVS+G+DA P
Sbjct: 888 FNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTP----- 942
Query: 243 TGTYYMLAANIKQLAKD---LCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEF 299
G Y + A L K L G R V LEGG++L ++ + A LG +E
Sbjct: 943 LGGYNLSARCFGYLTKQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLG-----NEL 997
Query: 300 D--NPAILYEEPSAKVKQAIERVKHIHS 325
D +L + P+A +++E+V IHS
Sbjct: 998 DPLPEKVLQQRPNANAVRSMEKVMEIHS 1025
>sp|Q99P99|HDAC4_RAT Histone deacetylase 4 OS=Rattus norvegicus GN=Hdac4 PE=1 SV=2
Length = 1077
Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats.
Identities = 102/267 (38%), Positives = 147/267 (55%), Gaps = 28/267 (10%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VAIAA+ Q+
Sbjct: 767 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRL 822
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 823 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 882
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 883 VNMAFTGGLDPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 941
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG---EPSKASE 298
+ + L + LA G R V LEGG++L ++ + A LG EP
Sbjct: 942 SAKCFGYLTKQLMGLA----GGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEK- 996
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 997 -----VLHQRPNANAVHSMEKVMGIHS 1018
>sp|Q6NZM9|HDAC4_MOUSE Histone deacetylase 4 OS=Mus musculus GN=Hdac4 PE=1 SV=1
Length = 1076
Score = 168 bits (425), Expect = 6e-41, Method: Composition-based stats.
Identities = 101/267 (37%), Positives = 147/267 (55%), Gaps = 28/267 (10%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + LV VA + + GFA++RPPGHHA PMGFC F +VA+AA+ Q+
Sbjct: 766 AVGCVVELVFKVATGELKN----GFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRL 821
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D+DVHHGNGT AFY+DP++ ++S H+ DG+ +PG+G DEVG G G G
Sbjct: 822 NVSKILIVDWDVHHGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFN 881
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F V++P A F PD++LVS+G+DA H PL
Sbjct: 882 VNMAFTGGLEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHP-TPLGGYNL 940
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLG---EPSKASE 298
+ + L + LA G R V LEGG++L ++ + A LG EP
Sbjct: 941 SAKCFGYLTKQLMGLA----GGRLVLALEGGHDLTAICDASEACVSALLGNELEPLPEK- 995
Query: 299 FDNPAILYEEPSAKVKQAIERVKHIHS 325
+L++ P+A ++E+V IHS
Sbjct: 996 -----VLHQRPNANAVHSMEKVMDIHS 1017
>sp|Q80ZH1|HDAC5_CRIGR Histone deacetylase 5 OS=Cricetulus griseus GN=HDAC5 PE=2 SV=1
Length = 1111
Score = 164 bits (416), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 143/264 (54%), Gaps = 22/264 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 793 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 848
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFYDDP + ++S H+ +G+ +PG+G +EVG G G G
Sbjct: 849 NVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGMGYN 908
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P A F PD++LVSAG+DA H L PL
Sbjct: 909 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 967
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L + D
Sbjct: 968 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALLS--VELQPLDE 1021
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 1022 -AVLQQKPSINAVATLEKVIEIQS 1044
>sp|Q9UBN7|HDAC6_HUMAN Histone deacetylase 6 OS=Homo sapiens GN=HDAC6 PE=1 SV=2
Length = 1215
Score = 163 bits (412), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 155/307 (50%), Gaps = 16/307 (5%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIALV 80
A +++ VH+ Y+ +E + +L + Y ++ + A+G+ + LV
Sbjct: 136 AEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLV 195
Query: 81 DSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIID 140
D+V ++ R G A+IRPPGHHA G+C+F +VA+AARYAQ+ H ++RV I+D
Sbjct: 196 DAVLGAEIRN----GMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVD 251
Query: 141 FDVHHGNGTNDAFYDDPDIFFLSTH---QDGSYP--GTGKIDEVGRGDGEGSTLNLPLPG 195
+DVHHG GT F DP + + S H Q +P G G G+G T+N+P
Sbjct: 252 WDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQ 311
Query: 196 -GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G D F V++P A F+P L+LV+AG+DA DP + T + A +
Sbjct: 312 VGMRDADYIAAFLHVLLPVALEFQPQLVLVAAGFDALQGDPKGEMAATPAGF----AQLT 367
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
L L G + + LEGGYNL +L+ V+ S LG+P ++P A V
Sbjct: 368 HLLMGLAGGKLILSLEGGYNLRALAEGVSASLHTLLGDPCPM--LESPGAPCRSAQASVS 425
Query: 315 QAIERVK 321
A+E ++
Sbjct: 426 CALEALE 432
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 144/276 (52%), Gaps = 15/276 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA+ ++ + H+ YV L +++ Y +TF + A GA L
Sbjct: 530 PATEAELLTCHSAEYVGHLRATEKMKTRELHRESSNFDSIYICPSTFACAQLATGAACRL 589
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK-RVFI 138
V++V + + G A++RPPGHHA GFC F +VA+AAR+AQ G R+ I
Sbjct: 590 VEAVLSGEVLN----GAAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQTISGHALRILI 645
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGSY---PGTGKIDEVGRGDGEGSTLNLPL 193
+D+DVHHGNGT F DDP + ++S H+ G++ G ++GR G G T+N+
Sbjct: 646 VDWDVHHGNGTQHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAW 705
Query: 194 PGGS-GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
G GD +H +++P A F P+L+LVSAG+DA DPL Q + Y A+
Sbjct: 706 NGPRMGDADYLAAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPEGY----AH 761
Query: 253 IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRA 288
+ L L R + LEGGYNL S+S S+A R+
Sbjct: 762 LTHLLMGLASGRIILILEGGYNLTSISESMAACTRS 797
>sp|Q94EJ2|HDA8_ARATH Histone deacetylase 8 OS=Arabidopsis thaliana GN=HDA8 PE=2 SV=1
Length = 377
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 153/311 (49%), Gaps = 16/311 (5%)
Query: 20 PASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIAL 79
PA V ++ H Y+ L +A D++ ++ E + T+ + +++ +L AAG ++
Sbjct: 69 PAIVSELLMFHTSEYIEKLVEA-DKSGER----CEIAAGTFMSPGSWEAALLAAGTTLSA 123
Query: 80 VDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFII 139
+ + + + +AL+RPPGHH+ P G+C N A+A + A + RV +I
Sbjct: 124 MQHILDCHGK----IAYALVRPPGHHSQPTQADGYCFLNNAALAVKLALNSGSCSRVAVI 179
Query: 140 DFDVHHGNGTNDAFYDDPDIFFLSTHQD-----GSYPGTGKIDEVGRGDGEGSTLNLPLP 194
D DVH+GNGT + FY + +S H + S+P G IDE+G G G LN+PLP
Sbjct: 180 DIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVPLP 239
Query: 195 GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIK 254
G+GD +E++VP +RF PD++++ G D+ DP T Y + ++
Sbjct: 240 NGTGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQIMR 299
Query: 255 QLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVK 314
+A++ R + EGGY++ +Y + L P +P Y E A
Sbjct: 300 GVAEEHSHGRLLMVQEGGYHVTYAAYCLHAMLEGVLKIPEP--HLSDPIAYYPEEEANAV 357
Query: 315 QAIERVKHIHS 325
A+E +K H+
Sbjct: 358 AAVESIKTYHT 368
>sp|P56523|CLR3_SCHPO Histone deacetylase clr3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr3 PE=1 SV=1
Length = 687
Score = 162 bits (409), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 152/283 (53%), Gaps = 20/283 (7%)
Query: 21 ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPT--YATATTFQESLAAAGAGIA 78
A+++++ VH++ + ++ S + + +E + Y + F LA G+ I
Sbjct: 115 ATLEELLQVHSQEMYDRVTNT-EKMSHEDLANLEKISDSLYYNNESAFCARLAC-GSAIE 172
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAAR-YAQR-AHGLKRV 136
+V + + FA++RPPGHHA P P GFC+F NV++ AR QR +KRV
Sbjct: 173 TCTAVVTGQVKN----AFAVVRPPGHHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRV 228
Query: 137 FIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDGS-YPGT--GKIDEVGRGDGEGSTLNL 191
I+D+D+HHGNGT AFYDDP++ ++S H ++G YPGT G + G G G G T+N+
Sbjct: 229 LIVDWDIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNI 288
Query: 192 PLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLA 250
P G GD F V++P A F PDL++VS G+DA D + T Y
Sbjct: 289 PWSCAGMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAY---- 344
Query: 251 ANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEP 293
A++ Q+ L + LEGGYNL+S+S S ++ LG P
Sbjct: 345 AHMTQMLMGLADGKVFISLEGGYNLDSISTSALAVAQSLLGIP 387
>sp|Q9UKV0|HDAC9_HUMAN Histone deacetylase 9 OS=Homo sapiens GN=HDAC9 PE=1 SV=2
Length = 1011
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 142/265 (53%), Gaps = 22/265 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G I L VA+ + + GFA++RPPGHHA MGFC F +VAI A+Y +
Sbjct: 754 AVGCVIELASKVASGELKN----GFAVVRPPGHHAEESTAMGFCFFNSVAITAKYLRDQL 809
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ ++ I+D DVHHGNGT AFY DP I ++S H+ +G+ +PG+G +EVG G GEG
Sbjct: 810 NISKILIVDLDVHHGNGTQQAFYADPSILYISLHRYDEGNFFPGSGAPNEVGTGLGEGYN 869
Query: 189 LNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD F ++ P A+ F PD++LVSAG+DA H PL +
Sbjct: 870 INIAWTGGLDPPMGDVEYLEAFRTIVKPVAKEFDPDMVLVSAGFDALEGHT-PPLGGYKV 928
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA R V LEGG++L ++ + A LG + D
Sbjct: 929 TAKCFGHLTKQLMTLAD----GRVVLALEGGHDLTAICDASEACVNALLGNELEPLAED- 983
Query: 302 PAILYEEPSAKVKQAIERVKHIHSL 326
IL++ P+ +++++ I S+
Sbjct: 984 --ILHQSPNMNAVISLQKIIEIQSM 1006
>sp|Q8RX28|HDA5_ARATH Histone deacetylase 5 OS=Arabidopsis thaliana GN=HDA5 PE=2 SV=1
Length = 660
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 142/270 (52%), Gaps = 22/270 (8%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y + + + AAG+ + L + VA + GFA++RPPGHHA MGFC+F N
Sbjct: 117 YLNGGSSEAAYLAAGSVVKLAEKVAEG----ELDCGFAIVRPPGHHAEADEAMGFCLFNN 172
Query: 120 VAIAARYAQRAH---GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD---GSYPG- 172
VA+AA + G+K++ I+D+DVHHGNGT F+ DP + F S H+ G YP
Sbjct: 173 VAVAASFLLNERPDLGVKKILIVDWDVHHGNGTQKMFWKDPRVLFFSVHRHEYGGFYPAG 232
Query: 173 -TGKIDEVGRGDGEGSTLNLPLPGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
G + VG G GEG +N+P G GD + +++P A+ F PD+I +SAG+DA
Sbjct: 233 DDGDYNMVGEGPGEGFNINVPWDQGRCGDADYLAAWDHILIPVAREFNPDVIFLSAGFDA 292
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
+ DPL T Y ++ + + A+ + V LEGGYNL+S++ S + L
Sbjct: 293 AINDPLGGCCVTPYGYSVMLKKLMEFAQ----GKIVLALEGGYNLDSIAKSSLACVQVLL 348
Query: 291 GEPSKASEFDNPAILYE-EPSAKVKQAIER 319
+ + P Y E + +V QA+ +
Sbjct: 349 ED----KQIQGPPEAYPFESTWRVIQAVRK 374
>sp|Q8GXJ1|HDA15_ARATH Histone deacetylase 15 OS=Arabidopsis thaliana GN=HDA15 PE=2 SV=2
Length = 552
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 118/202 (58%), Gaps = 9/202 (4%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFAL+RPPGHHA + MGFC+ N A+AA AQ A K+V I+D+DVHHGNGT + F
Sbjct: 267 GFALVRPPGHHAGVRHAMGFCLHNNAAVAALVAQAAG-AKKVLIVDWDVHHGNGTQEIFE 325
Query: 155 DDPDIFFLSTHQDGS---YPGTGKIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVI 210
+ + ++S H+ YPGTG DEVG GEG +N+P GG GD F V+
Sbjct: 326 QNKSVLYISLHRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVV 385
Query: 211 VPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLE 270
+P A F PD +++SAG+DA DPL T Y + + Q+ DLCG + + LE
Sbjct: 386 LPIASAFSPDFVIISAGFDAARGDPLGCCDVTPAGY----SRMTQMLGDLCGGKMLVILE 441
Query: 271 GGYNLNSLSYSVADSFRAFLGE 292
GGYNL S+S S + LGE
Sbjct: 442 GGYNLRSISASATAVIKVLLGE 463
>sp|Q8WUI4|HDAC7_HUMAN Histone deacetylase 7 OS=Homo sapiens GN=HDAC7 PE=1 SV=2
Length = 952
Score = 158 bits (399), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 170/335 (50%), Gaps = 44/335 (13%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 572 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLAGLLAQRMFVMLPCGGVGVDTDTIWNE 631
Query: 69 ------SLAAAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ AAG+ L VA+ KN GFA++RPPGHHA MGFC F +V
Sbjct: 632 LHSSNAARWAAGSVTDLAFKVASRELKN------GFAVVRPPGHHADHSTAMGFCFFNSV 685
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID 177
AIA R Q+ ++ I+D+DVHHGNGT FY DP + ++S H+ DG+ +PG+G +D
Sbjct: 686 AIACRQLQQQSKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVD 745
Query: 178 EVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
EVG G GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA
Sbjct: 746 EVGAGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEG 805
Query: 234 DPLASLQFTTGTYYMLAAN---IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
P G Y++ A + Q +L G V LEGG++L ++ + A L
Sbjct: 806 HP-----APLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALL 860
Query: 291 GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIHS 325
G ++ ++P+ +++E V +HS
Sbjct: 861 G--NRVDPLSEEG-WKQKPNLNAIRSLEAVIRVHS 892
>sp|Q57955|Y535_METJA Uncharacterized protein MJ0535 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0535 PE=3 SV=1
Length = 343
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 155/320 (48%), Gaps = 29/320 (9%)
Query: 15 LKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGS-----GPTYATATTFQES 69
L + DDI + ++ ++ + + R II + S G TY T +
Sbjct: 34 LNSLKSNGFDDIVLIEGKSTINEILEIHSRDYVYSIINLSKSFNYYDGDTYLCDRTLDAA 93
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKG------PMGFCVFGNVAIA 123
L A V A K+R L FAL RPPGHHA G GFC+F N+A A
Sbjct: 94 LTAFKLAKEAVK--LALKDRD---LYFALTRPPGHHAGISGRALGAMSNGFCIFNNIAGA 148
Query: 124 ARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSYPGTGKIDEVGRGD 183
AR A+ +K+V IIDFDVHHGNGT + F++D + + HQ G YPGTG I ++G +
Sbjct: 149 ARLAKNY--MKKVIIIDFDVHHGNGTQEIFWNDNRVIHIDFHQRGIYPGTGDILDIGGEE 206
Query: 184 GEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTT 243
+G+ +NLP P S D ++E++ P F PD +LVSAG+DA + D LAS+ T
Sbjct: 207 AKGTKINLPFPAHSTDADYIFAWNEIVEPILNYFSPDTVLVSAGFDAFINDGLASMDLTE 266
Query: 244 GTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPA 303
Y + A L G LEGGY++ L Y+ ++ ++
Sbjct: 267 TFYRFVGAK-------LSGYSVTAVLEGGYSI-GLKYAPPAFLDGYVDAKDVLDNLEDYT 318
Query: 304 ILYEEPSAKVKQAIERVKHI 323
++ S +VK ++ VK I
Sbjct: 319 VI---NSNEVKSMVKNVKKI 335
>sp|Q8C2B3|HDAC7_MOUSE Histone deacetylase 7 OS=Mus musculus GN=Hdac7 PE=1 SV=2
Length = 938
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 170/334 (50%), Gaps = 44/334 (13%)
Query: 21 ASVDDIASVHARAYV--------SGLE----KAMDRASQQGIILIEGSGPTYATATTFQE 68
AS++++ SVH+ +V S L+ K +Q+ +++ G T T + E
Sbjct: 559 ASLEELQSVHSERHVLLYGTNPLSRLKLDNGKLTGLLAQRTFVMLPCGGVGVDTDTIWNE 618
Query: 69 ------SLAAAGAGIALVDSVAAS--KNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNV 120
+ AAG+ L VA+ KN GFA++RPPGHHA MGFC F +V
Sbjct: 619 LHSSNAARWAAGSVTDLAFKVASRELKN------GFAVVRPPGHHADHSTAMGFCFFNSV 672
Query: 121 AIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKID 177
AIA R Q+ ++ I+D+DVHHGNGT FY DP + ++S H+ DG+ +PG+G +D
Sbjct: 673 AIACRQLQQHGKASKILIVDWDVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVD 732
Query: 178 EVGRGDGEGSTLNLPLPGG----SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
EVG G GEG +N+ GG GD F V++P A+ F PDL+LVSAG+DA
Sbjct: 733 EVGTGSGEGFNVNVAWAGGLDPPMGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEG 792
Query: 234 DPLASLQFTTGTYYMLAAN---IKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
P G Y++ A + Q +L G V LEGG++L ++ + A L
Sbjct: 793 HP-----APLGGYHVSAKCFGYMTQQLMNLAGGAVVLALEGGHDLTAICDASEACVAALL 847
Query: 291 GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
G +K + ++P+ +++E V +H
Sbjct: 848 G--NKVDPLSEES-WKQKPNLSAIRSLEAVVRVH 878
>sp|P72702|Y245_SYNY3 Uncharacterized protein slr0245 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr0245 PE=3 SV=1
Length = 304
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 117/196 (59%), Gaps = 10/196 (5%)
Query: 96 FALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYD 155
F L RPPGHHAI MGFC+ NVAIAA YA G++RV I+D+DVHHGNGT
Sbjct: 117 FVLARPPGHHAIRNTGMGFCLLNNVAIAAHYALTRPGVERVAILDWDVHHGNGTEALVDH 176
Query: 156 DPDIFFLSTHQDGSYPGTGKIDEVGRGDGEGSTLNLPL-PGGSGDTAMRTVFHEVIVPCA 214
+P IF+ S HQ YPGTG + G+ D + LN+PL PGG G R F ++P
Sbjct: 177 NPRIFYCSLHQFPCYPGTGAAGDRGQHD---NVLNIPLKPGGDGKV-YREAFEHKVLPFL 232
Query: 215 QRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYN 274
++ KPDL+LVSAGYDA+ DPLA + Y M+ + +++ V LEGGY+
Sbjct: 233 RQVKPDLLLVSAGYDANHSDPLAYMNLIPEDYGMMTHYLMEIS-----PYPVLGLEGGYH 287
Query: 275 LNSLSYSVADSFRAFL 290
L SL+ SV ++ + L
Sbjct: 288 LPSLAKSVVETLKPLL 303
>sp|Q613L4|HDA4_CAEBR Histone deacetylase 4 OS=Caenorhabditis briggsae GN=hda-4 PE=3 SV=1
Length = 892
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 142/262 (54%), Gaps = 19/262 (7%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
AAG I L VA + + GFA IRPPGHHA + +GFC F NVA+ A+ Q +
Sbjct: 599 AAGTLIELSSQVAEGRLKN----GFACIRPPGHHAEAEQALGFCFFNNVAVTAKVLQAKY 654
Query: 132 GLK--RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTGKIDEVGRGDGEG 186
++ ++ IID+DVHHGNGT +F DDP++ ++S H+ + +PGTG + E+G+G G+G
Sbjct: 655 PVQCAKIAIIDWDVHHGNGTQLSFDDDPNVLYMSLHRHDNGNFFPGTGSVTEIGKGAGKG 714
Query: 187 STLNLPLPGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQFT 242
++N+P GG D + V+ P F PD ILVSAG+DA HV + L + T
Sbjct: 715 FSVNIPFSGGVMKDAEYLAAWRTVVEPVLASFCPDFILVSAGFDACHGHV-NALGGYEIT 773
Query: 243 TGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNP 302
+ + + A + V LEGGYNL+S+S + +A +GE A
Sbjct: 774 PEMFGYMTKCLLSYAN----GKVVLALEGGYNLDSISAAAEQCVQALIGESDDAGRLCTD 829
Query: 303 AILYEEPSAKVKQAIERVKHIH 324
+ L P+ + +++V IH
Sbjct: 830 S-LENLPNQSALETLQKVIAIH 850
>sp|Q8LRK8|HDA18_ARATH Histone deacetylase 18 OS=Arabidopsis thaliana GN=HDA18 PE=2 SV=1
Length = 682
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
Y + + + AAG+ + + + VA + GFA++RPPGHHA MGFC+F N
Sbjct: 150 YLNGGSSEAAYLAAGSVVKVAEKVAEG----ELDCGFAIVRPPGHHAESDEAMGFCLFNN 205
Query: 120 VAIAARYAQRAH---GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GS-YP-- 171
VA+AA + +K++ I+D+D+HHGNGT F+ D + S H+ GS YP
Sbjct: 206 VAVAASFLLNERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFG 265
Query: 172 GTGKIDEVGRGDGEGSTLNLPLP-GGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
G + VG G GEG +N+P GG GD V++ +++P + FKPD+IL+SAG+DA
Sbjct: 266 DDGDFNMVGEGPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDA 325
Query: 231 HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYS 281
+ DPL T Y ++ + + A + V LEGGYNL SL S
Sbjct: 326 AIGDPLGGCCVTPYGYSVMLKKLMEFAH----GKIVLALEGGYNLESLGKS 372
>sp|O17323|HDA4_CAEEL Histone deacetylase 4 OS=Caenorhabditis elegans GN=hda-4 PE=1 SV=3
Length = 869
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 141/274 (51%), Gaps = 19/274 (6%)
Query: 60 YATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGN 119
+ A+T + AAG I L VA + + GFA IRPPGHHA + MGFC F N
Sbjct: 567 FNDASTQTAARLAAGTLIELSSQVAEGRLKN----GFACIRPPGHHAEHEQAMGFCFFNN 622
Query: 120 VAIAARYAQRAHGLK--RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGS---YPGTG 174
VA+A + Q + + ++ IID+DVHHGNGT +F +DP++ ++S H+ +PGTG
Sbjct: 623 VAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLYMSLHRHDKGNFFPGTG 682
Query: 175 KIDEVGRGDGEGSTLNLPLPGG-SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVL 233
+ EVG+ D +G T+N+P G D + VI P F PD I+VSAG+DA
Sbjct: 683 SVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMASFCPDFIIVSAGFDACHG 742
Query: 234 DPLASLQFTTGTYYMLAANIKQLAKDL---CGSRCVFFLEGGYNLNSLSYSVADSFRAFL 290
P A G Y + + K L + V LEGGY+L S+S + +A +
Sbjct: 743 HPNA-----LGGYEVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSISEAAQQCVQALI 797
Query: 291 GEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
GE A + A L P+ + +++V IH
Sbjct: 798 GESDDAGRLSSVA-LESLPNPSAVETLQKVIAIH 830
>sp|Q9Z2V6|HDAC5_MOUSE Histone deacetylase 5 OS=Mus musculus GN=Hdac5 PE=1 SV=2
Length = 1113
Score = 151 bits (381), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 145/264 (54%), Gaps = 22/264 (8%)
Query: 72 AAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAH 131
A G + L VAA + + GFA+IRPPGHHA MGFC F +VAI A+ Q+
Sbjct: 795 AVGCLVELAFKVAAGELKN----GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 850
Query: 132 GLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGST 188
+ +V I+D+D+HHGNGT AFY+DP + ++S H+ +G+ +PG+G +EVG G G G
Sbjct: 851 SVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYN 910
Query: 189 LNLPLPGGS----GDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQF 241
+N+ GG GD T F V++P AQ F PD++LVSAG+DA H L PL
Sbjct: 911 VNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQEFSPDVVLVSAGFDAVEGH-LSPLGGYSV 969
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDN 301
T + L + LA G R V LEGG++L ++ + A L S + +
Sbjct: 970 TARCFGHLTRQLMTLA----GGRVVLALEGGHDLTAICDASEACVSALL---SVELQPLD 1022
Query: 302 PAILYEEPSAKVKQAIERVKHIHS 325
A+L ++PS +E+V I S
Sbjct: 1023 EAVLQQKPSVNAVATLEKVIEIQS 1046
>sp|Q54VQ7|HDA22_DICDI Type-2 histone deacetylase 2 OS=Dictyostelium discoideum GN=hdaC PE=2
SV=1
Length = 1704
Score = 149 bits (377), Expect = 2e-35, Method: Composition-based stats.
Identities = 90/249 (36%), Positives = 128/249 (51%), Gaps = 22/249 (8%)
Query: 59 TYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKG------PM 112
T+ + + + +L A+G+ A VDSV+ R F IRPPGHHA G
Sbjct: 1171 TFVSHRSIKAALRASGSVCAAVDSVS----RSGYTRAFCAIRPPGHHAGRYGRTSDAPSQ 1226
Query: 113 GFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH----QDG 168
G+C+ NVAI A+YA G R+ ++DFDVHHGNGT + D + F+S H +
Sbjct: 1227 GYCLINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNFLFISIHVCDEKRY 1286
Query: 169 SYPGTGK----IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILV 224
YPGTG+ IDEV G +G+ LN+ L +G + I+P + +KP LI +
Sbjct: 1287 FYPGTGQDVGDIDEVS-GQFDGNILNIGLKRNTGSAVFLQQWMNKIIPRLEAYKPQLIFL 1345
Query: 225 SAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL---NSLSYS 281
SAG+D H DP L+ Y+++ IK +A C R + LEGGY + NSL
Sbjct: 1346 SAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYCKGRIISVLEGGYGIEKTNSLQRC 1405
Query: 282 VADSFRAFL 290
V +A +
Sbjct: 1406 VNSHLKALI 1414
>sp|Q569C4|HDA10_RAT Histone deacetylase 10 OS=Rattus norvegicus GN=Hdac10 PE=2 SV=1
Length = 588
Score = 148 bits (373), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 18/269 (6%)
Query: 10 SEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYATATTFQES 69
E + + AS +++ VH+ Y++ ++K ++ L + Y TF +
Sbjct: 44 EERCQCLSVCEASEEELGLVHSPEYIALVQKTQTLDKEELHTLSKQYDAVYFHPDTFHCA 103
Query: 70 LAAAGAGIALVDSV--AASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYA 127
AAGA + LVD+V A N G AL+RPPGHH+ GFCVF NVAIAAR+A
Sbjct: 104 RLAAGAALRLVDAVLTGAVHN------GVALVRPPGHHSQRAAANGFCVFNNVAIAARHA 157
Query: 128 QRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ---DGSYP--GTGKIDEVGRG 182
++ +GL+R+ I+D+DVHHG G F DDP + + S H+ +P D VGRG
Sbjct: 158 KQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGNFWPFLPESDADTVGRG 217
Query: 183 DGEGSTLNLPLPG-GSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQF 241
G+G T+NLP G G+ F V++P A F P+L+LVSAG+D+ + DP +Q
Sbjct: 218 RGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEGQMQA 277
Query: 242 TTGTYYMLAANIKQLAKDLCGSRCVFFLE 270
T + A++ QL + L G R LE
Sbjct: 278 TPECF----AHLTQLLQVLAGGRICAVLE 302
>sp|Q9UQL6|HDAC5_HUMAN Histone deacetylase 5 OS=Homo sapiens GN=HDAC5 PE=1 SV=2
Length = 1122
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 134/241 (55%), Gaps = 18/241 (7%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA+IRPPGHHA MGFC F +VAI A+ Q+ + +V I+D+D+HHGNGT AFY
Sbjct: 823 GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFY 882
Query: 155 DDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGS----GDTAMRTVFH 207
+DP + ++S H+ +G+ +PG+G +EVG G G G +N+ GG GD T F
Sbjct: 883 NDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFR 942
Query: 208 EVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
V++P A F PD++LVSAG+DA H L PL T + L + LA G R
Sbjct: 943 TVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSVTARCFGHLTRQLMTLA----GGR 997
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
V LEGG++L ++ + A L + D A+L ++P+ +E+V I
Sbjct: 998 VVLALEGGHDLTAICDASEACVSALLS--VELQPLDE-AVLQQKPNINAVATLEKVIEIQ 1054
Query: 325 S 325
S
Sbjct: 1055 S 1055
>sp|Q5R902|HDAC5_PONAB Histone deacetylase 5 OS=Pongo abelii GN=HDAC5 PE=2 SV=1
Length = 1122
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 134/241 (55%), Gaps = 18/241 (7%)
Query: 95 GFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFY 154
GFA+IRPPGHHA MGFC F +VAI A+ Q+ + +V I+D+D+HHGNGT AFY
Sbjct: 823 GFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFY 882
Query: 155 DDPDIFFLSTHQ--DGS-YPGTGKIDEVGRGDGEGSTLNLPLPGGS----GDTAMRTVFH 207
+DP + ++S H+ +G+ +PG+G +EVG G G G +N+ GG GD T F
Sbjct: 883 NDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFR 942
Query: 208 EVIVPCAQRFKPDLILVSAGYDA---HVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSR 264
V++P A F PD++LVSAG+DA H L PL T + L + LA G R
Sbjct: 943 TVVMPIAHEFSPDVVLVSAGFDAVEGH-LSPLGGYSVTARCFGHLTRQLMTLA----GGR 997
Query: 265 CVFFLEGGYNLNSLSYSVADSFRAFLGEPSKASEFDNPAILYEEPSAKVKQAIERVKHIH 324
V LEGG++L ++ + A L + D A+L ++P+ +E+V I
Sbjct: 998 VVLALEGGHDLTAICDASEACVSALLS--VELQPLDE-AVLQQKPNINAVATLEKVIEIQ 1054
Query: 325 S 325
S
Sbjct: 1055 S 1055
>sp|Q56195|ACUC_STAXY Acetoin utilization protein AcuC OS=Staphylococcus xylosus GN=acuC
PE=3 SV=1
Length = 385
Score = 130 bits (327), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 143/308 (46%), Gaps = 29/308 (9%)
Query: 1 MELTSEFRGSEIIELKN---FSP--ASVDDIASVHARAYVSGLEKAMDRASQQGIILIEG 55
++LT+E E+ +LK SP A+ D+++ +HA Y+ + R + GI L E
Sbjct: 32 LKLTTELL-MELGQLKQHHIISPRIATDDELSLIHAYDYIQAI-----RHASHGI-LSEN 84
Query: 56 SGPTYAT--ATTFQ------ESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAI 107
Y T Q S G + L D + + LG L HH++
Sbjct: 85 EAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGL-----HHSL 139
Query: 108 PKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD 167
P GFC++ +VAI Y + + +RV ID D HHG+GT +FY + S H+
Sbjct: 140 PGRANGFCIYNDVAITISYLMQKYN-QRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHET 198
Query: 168 GSY--PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVS 225
G + PG+G E G G G T+N+PL + D + VF + I P FKPD+I+
Sbjct: 199 GKFLFPGSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVFKQTIEPVVASFKPDIIVSV 258
Query: 226 AGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNL-NSLSYSVAD 284
G D H LDPL + T T Y + +K LA + + F GGYN+ + + +
Sbjct: 259 HGVDVHYLDPLTHMSCTLNTLYEIPYIVKSLADTYTQGKVIMFGGGGYNIWKVVPRAWSH 318
Query: 285 SFRAFLGE 292
F A +GE
Sbjct: 319 VFLALIGE 326
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAM------DRASQQGIILIEGSGPTYATATTFQESLAAAG 74
A+ D++ +H YV ++ A D A + G+ E S + + S G
Sbjct: 56 ATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKHM----HRHSATIVG 111
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ L D + + K LG L HHA P GFC++ ++AI A+Y + + +
Sbjct: 112 GALTLADLIMSGKVLNGCHLGGGL-----HHAQPGRASGFCIYNDIAITAQYLAKEYN-Q 165
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLP 192
RV IID D HHG+GT +FY D + S H+ G + PG+G E G G G T+N+P
Sbjct: 166 RVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVP 225
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L + D + F + P + FKPD+IL G D H DPL L T + Y +
Sbjct: 226 LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYF 285
Query: 253 IKQLAKDLCGSRCVFFLEGGYNL 275
+K LA + + F GGYN+
Sbjct: 286 VKYLADSYTNGKVIMFGGGGYNI 308
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAM------DRASQQGIILIEGSGPTYATATTFQESLAAAG 74
A+ D++ +H YV ++ A D A + G+ E S + + S G
Sbjct: 56 ATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENSQFKHM----HRHSATIVG 111
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ L D + + K LG L HHA P GFC++ ++AI A+Y + + +
Sbjct: 112 GALTLADLIMSGKVLNGCHLGGGL-----HHAQPGRASGFCIYNDIAITAQYLAKEYN-Q 165
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLP 192
RV IID D HHG+GT +FY D + S H+ G + PG+G E G G G T+N+P
Sbjct: 166 RVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVP 225
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L + D + F + P + FKPD+IL G D H DPL L T + Y +
Sbjct: 226 LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYF 285
Query: 253 IKQLAKDLCGSRCVFFLEGGYNL 275
+K LA + + F GGYN+
Sbjct: 286 VKYLADSYTNGKVIMFGGGGYNI 308
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 127 bits (320), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 124/263 (47%), Gaps = 18/263 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAM------DRASQQGIILIEGSGPTYATATTFQESLAAAG 74
A+ D++ +H YV ++ A D A + G+ E + + S G
Sbjct: 56 ATDDELMLIHKYDYVEAIKHASHGIISEDEAMKYGLNDEENGQFKHM----HRHSATIVG 111
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ L D + + K LG L HHA P GFC++ ++AI A+Y + + +
Sbjct: 112 GALTLADLIMSGKALNGCHLGGGL-----HHAQPGRASGFCIYNDIAITAQYLAKEYN-Q 165
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLP 192
RV IID D HHG+GT +FY D + S H+ G + PG+G E G G G T+N+P
Sbjct: 166 RVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVP 225
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L + D++ F + P + FKPD+IL G D H DPL L T + Y +
Sbjct: 226 LEPYTEDSSFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYF 285
Query: 253 IKQLAKDLCGSRCVFFLEGGYNL 275
+K LA + + F GGYN+
Sbjct: 286 VKYLADTYTNGKIIMFGGGGYNI 308
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAM------DRASQQGIILIEGSGPTYATATTFQESLAAAG 74
A+ D++ +H YV ++ A D A + G+ E + + S G
Sbjct: 56 ATDDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHM----HRHSATIVG 111
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ L D + + K LG L HHA P GFC++ ++AI A+Y + + +
Sbjct: 112 GALTLADLIMSGKVLNGCHLGGGL-----HHAQPGRASGFCIYNDIAITAQYLAKEYN-Q 165
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLP 192
RV IID D HHG+GT +FY D + S H+ G + PG+G E G G G T+N+P
Sbjct: 166 RVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVP 225
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L + D + F + P + FKPD+IL G D H DPL L T + Y +
Sbjct: 226 LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYF 285
Query: 253 IKQLAKDLCGSRCVFFLEGGYNL 275
+K LA + + F GGYN+
Sbjct: 286 VKYLADSYTNGKVIMFGGGGYNI 308
>sp|P64376|ACUC_STAAN Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
N315) GN=acuC PE=1 SV=1
Length = 389
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAM------DRASQQGIILIEGSGPTYATATTFQESLAAAG 74
A+ D++ +H YV ++ A D A + G+ E + + S G
Sbjct: 56 ATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHM----HRHSATIVG 111
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ L D + + K LG L HHA P GFC++ ++AI A+Y + + +
Sbjct: 112 GALTLADLIMSGKVLNGCHLGGGL-----HHAQPGRASGFCIYNDIAITAQYIAKEYN-Q 165
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLP 192
RV IID D HHG+GT +FY D + S H+ G + PG+G E G G G T+N+P
Sbjct: 166 RVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVP 225
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L + D + F + P + FKPD+IL G D H DPL L T + Y +
Sbjct: 226 LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYF 285
Query: 253 IKQLAKDLCGSRCVFFLEGGYNL 275
+K LA + + F GGYN+
Sbjct: 286 VKYLADSYTNGKVIMFGGGGYNI 308
>sp|P64375|ACUC_STAAM Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=acuC PE=3 SV=1
Length = 389
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 123/263 (46%), Gaps = 18/263 (6%)
Query: 21 ASVDDIASVHARAYVSGLEKAM------DRASQQGIILIEGSGPTYATATTFQESLAAAG 74
A+ D++ +H YV ++ A D A + G+ E + + S G
Sbjct: 56 ATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHM----HRHSATIVG 111
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
+ L D + + K LG L HHA P GFC++ ++AI A+Y + + +
Sbjct: 112 GALTLADLIMSGKVLNGCHLGGGL-----HHAQPGRASGFCIYNDIAITAQYIAKEYN-Q 165
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLP 192
RV IID D HHG+GT +FY D + S H+ G + PG+G E G G G T+N+P
Sbjct: 166 RVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVP 225
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAAN 252
L + D + F + P + FKPD+IL G D H DPL L T + Y +
Sbjct: 226 LEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYF 285
Query: 253 IKQLAKDLCGSRCVFFLEGGYNL 275
+K LA + + F GGYN+
Sbjct: 286 VKYLADSYTNGKVIMFGGGGYNI 308
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 120/259 (46%), Gaps = 10/259 (3%)
Query: 21 ASVDDIASVHARAYVSG--LEKAMDRASQQGIILIEGSGPTYATATTFQESLAAAGAGIA 78
AS ++++ VH Y+ L A +++G G+ T A + + G +
Sbjct: 52 ASEEELSLVHTDDYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLT 111
Query: 79 LVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFI 138
D V + + LG L HH GFC++ + A+A +Y Q+ + RV
Sbjct: 112 AADWVMSGQALHAANLGGGL-----HHGFRGRASGFCIYNDSAVAIQYIQKKYS-ARVLY 165
Query: 139 IDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY--PGTGKIDEVGRGDGEGSTLNLPLPGG 196
ID D HHG+G FYD+PD+ LS H+ G Y PGTG+I E G G G G + N+PL
Sbjct: 166 IDTDAHHGDGVQFTFYDNPDVCTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNIPLDAF 225
Query: 197 SGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
+ D + + A F+PD+I+ G DAH DPL L T Y + L
Sbjct: 226 TEDDSFLEAYRTAASEVAAYFEPDVIISQNGADAHYYDPLTHLSATINIYEEIPRLAHTL 285
Query: 257 AKDLCGSRCVFFLEGGYNL 275
A CG + + GGY++
Sbjct: 286 AHQYCGGKWIAVGGGGYDI 304
>sp|Q48935|APHA_MYCRA Acetylpolyamine aminohydrolase OS=Mycoplana ramosa GN=aphA PE=1
SV=1
Length = 341
Score = 110 bits (274), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/303 (29%), Positives = 134/303 (44%), Gaps = 51/303 (16%)
Query: 23 VDDIASVHARAYVSGLEKAMDRASQQGI-------------------ILIEGSGPTYATA 63
++ + VH Y++ LE A DR G IEG Y A
Sbjct: 56 LETVLKVHDAGYLNFLETAWDRWKAAGYKGEAIATSFPVRRTSPRIPTDIEGQIGYYCNA 115
Query: 64 T-------TFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCV 116
T++ +L++ + I D +AA F+L RPPGHHA G+C
Sbjct: 116 AETAISPGTWEAALSSMASAIDGADLIAAGHKA-----AFSLCRPPGHHAGIDMFGGYCF 170
Query: 117 FGNVAIAARYAQRA--HGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQD--GSYPG 172
N A+AA QR G K++ I+D D HHGNGT D FY+ D+FF S H D ++P
Sbjct: 171 INNAAVAA---QRLLDKGAKKIAILDVDFHHGNGTQDIFYERGDVFFASLHGDPAEAFPH 227
Query: 173 -TGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQR---FKPDLILVSAGY 228
G +E G+G G G+T N P+ G +V+ E + +R F + I+VS G
Sbjct: 228 FLGYAEETGKGAGAGTTANYPM----GRGTPYSVWGEALTDSLKRIAAFGAEAIVVSLGV 283
Query: 229 DAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSLSYSVADSFRA 288
D DP++ + T+ Y + I G + +EGGY + + +VA+ +
Sbjct: 284 DTFEQDPISFFKLTSPDYITMGRTIAA-----SGVPLLVVMEGGYGVPEIGLNVANVLKG 338
Query: 289 FLG 291
G
Sbjct: 339 VAG 341
>sp|Q3JUN4|APHA_BURP1 Acetylpolyamine aminohydrolase OS=Burkholderia pseudomallei (strain
1710b) GN=aphA PE=1 SV=1
Length = 341
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 102/204 (50%), Gaps = 11/204 (5%)
Query: 89 RPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNG 148
R P +AL RPPGHHA GFC N AIAA+ + H RV ++D D+HHG G
Sbjct: 141 RDGAPAAYALCRPPGHHARVDAAGGFCYLNNAAIAAQALRARHA--RVAVLDTDMHHGQG 198
Query: 149 TNDAFYDDPDIFFLSTHQDGS--YPGT-GKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTV 205
+ FY D+ ++S H D + YP G DE G G+G G +NLP+P GS + A
Sbjct: 199 IQEIFYARRDVLYVSIHGDPTNFYPAVAGFDDERGAGEGLGYNVNLPMPHGSSEAAFFER 258
Query: 206 FHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQLAKDLCGSRC 265
+ + +RF PD +++S G+D + DP + + TT + L I L
Sbjct: 259 VDDALREL-RRFAPDALVLSLGFDVYRDDPQSQVAVTTDGFGRLGHLIGALRLP-----T 312
Query: 266 VFFLEGGYNLNSLSYSVADSFRAF 289
V EGGY++ SL + F F
Sbjct: 313 VIVQEGGYHIESLEANARSFFGGF 336
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA + GFC ++A+AA + H +RV ID DVHHG+G + FY + S
Sbjct: 137 HHAKKREASGFCYVNDIALAALELLKYH--QRVLYIDIDVHHGDGVEEFFYTTDRVMTCS 194
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG I + G G G+ +N+PL G D + +VF VI Q F+P+ +
Sbjct: 195 FHKFGEYFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVISHIMQWFRPEAV 254
Query: 223 LVSAGYDAHVLDPLASLQFTTGTYYMLAANIKQL 256
++ G D+ D L + + M +K
Sbjct: 255 ILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSF 288
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 107/235 (45%), Gaps = 15/235 (6%)
Query: 3 LTSEFRGSEIIELKNFSPASVDDIASVHARAYVSGLEKAMDRASQQGIILIEGSGPTYAT 62
L S + +I++L A+ D++ H+ YV+ L K + + L G+ +
Sbjct: 58 LVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANK---LPRGTLENFNI 114
Query: 63 AT---TFQE--SLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVF 117
FQ G +L + N+ D + ++ HHA P GFC
Sbjct: 115 GDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWS---GGLHHAKKNSPSGFCYV 171
Query: 118 GNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQ-DGSY-PGTGK 175
++ ++ R H R+ ID D+HHG+G +AFY +F LS H+ +G + PGTG
Sbjct: 172 NDIVLSILNLLRYH--PRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGD 229
Query: 176 IDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDA 230
+ E+G G+ LN+PL G D + +F ++ P FKP LI+ G D+
Sbjct: 230 LTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDPLIMTFKPTLIVQQCGADS 284
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQRAHGLK 134
AG ++ +V +K + D + +A HHA GFC ++ +A + H +
Sbjct: 114 AGGSVASAVKLNKQQTDIAVNWA---GGLHHAKKSEASGFCYVNDIVLAILELLKYH--Q 168
Query: 135 RVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLPL 193
RV ID D+HHG+G +AFY + +S H+ G Y PGTG + ++G G G+ +N PL
Sbjct: 169 RVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPL 228
Query: 194 PGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
G D + +F VI + F+P +++ G D+ D L T
Sbjct: 229 RDGIDDESYEAIFKPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLT 277
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 105/234 (44%), Gaps = 16/234 (6%)
Query: 15 LKNFSPASVDDIASVHARAYVSGL-----EKAMDRASQQGIILIEGSGPTYATATTFQES 69
LK F PA D+ HA YVS L E D+ Q + P + +F ++
Sbjct: 62 LKPF-PARDRDLCRFHADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQT 120
Query: 70 LAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKGPMGFCVFGNVAIAARYAQR 129
A G SV + D + +A HHA GFC ++ +A +
Sbjct: 121 YAGGSVG----GSVKLNHGLCDIAINWA---GGLHHAKKCEASGFCYVNDIVLAILELLK 173
Query: 130 AHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGST 188
H +RV +D D+HHG+G +AFY + +S H+ G Y PGTG I ++G G G+ +
Sbjct: 174 QH--ERVLYVDIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYS 231
Query: 189 LNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
LN+PL G D + +F ++ + F+P +++ G D+ D L +
Sbjct: 232 LNVPLDDGIDDESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLS 285
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 110/230 (47%), Gaps = 17/230 (7%)
Query: 20 PASVDDIASVHARAYVSGLEKA----MDRASQQGIILIEGSG-PTYATATTFQESLAAAG 74
PAS +D+ H+ Y++ L+ A + ++Q + G P + F + L++ G
Sbjct: 62 PASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQ-LSSGG 120
Query: 75 AGIALVDSVAASKNRPDPPLGFALIRPPG-HHAIPKGPMGFCVFGNVAIAARYAQRAHGL 133
S+AA+ + A+ G HHA GFC ++ + + H
Sbjct: 121 -------SLAAATKLNKQKVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYH-- 171
Query: 134 KRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTHQDGSY-PGTGKIDEVGRGDGEGSTLNLP 192
KRV +D DVHHG+G +AFY + +S H+ G + PGTG + ++G G G+ ++N+P
Sbjct: 172 KRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKYGDFFPGTGDLKDIGAGKGKLYSVNVP 231
Query: 193 LPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFT 242
L G D + +++F ++ +RF P +++ G D+ D L T
Sbjct: 232 LRDGITDVSYQSIFKPIMTKVMERFDPCAVVLQCGADSLNGDRLGPFNLT 281
>sp|P28606|Y1628_SYNP2 Uncharacterized protein SYNPCC7002_A1628 OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)
GN=SYNPCC7002_A1628 PE=3 SV=2
Length = 300
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA P GFC+ ++AIA R Q+ +R+ I+D DVH G+GT F DDP +F S
Sbjct: 120 HHAFPGYGSGFCILNDLAIATRTIQQRGLAQRILIVDLDVHQGDGTAFIFQDDPTVFTFS 179
Query: 164 THQDGSYPGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLIL 223
H + ++P + S L+L LP G D + + + KPDL+
Sbjct: 180 MHCEVNFP----------SQKQRSDLDLGLPEGLDDDGYLQILAHHLEDLLSQVKPDLVF 229
Query: 224 VSAGYDAHVLDPLASLQFT-TGTYYMLAANIKQLAKDLC---GSRCVFFLEGGY--NLNS 277
AG D HV D L L T TG Y ++L C G + GGY N++
Sbjct: 230 YDAGVDTHVGDRLGKLAMTNTGLY-----RRERLVLSTCLAAGYPVACVIGGGYAKNIHD 284
Query: 278 LSYSVADSFRA 288
L Y + RA
Sbjct: 285 LVYRHSLLHRA 295
>sp|Q54X15|HDA21_DICDI Type-2 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaD PE=2
SV=1
Length = 1489
Score = 87.4 bits (215), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 57 GPTYATATTFQESLAAAGAGIALVDSVAASKNRPDPPLGFALIRPPGHHAIPKG------ 110
G T+ + + + +AGA +D+V + + F RPPGHHA G
Sbjct: 1188 GDTFVSKLSLHAAKRSAGATCQAIDNVM----KGNVTSAFVAARPPGHHAGRDGLTSGTS 1243
Query: 111 PMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLSTH--QDG 168
GFC+ +V I A+YAQ + L ++ IIDFDVHHGNGT + +D +FLS H ++G
Sbjct: 1244 SQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG 1303
Query: 169 SYP 171
YP
Sbjct: 1304 FYP 1306
Score = 67.8 bits (164), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/94 (36%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Query: 185 EGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLILVSAGYDAHVLDPLASLQFTTG 244
+G+ +N+PL S ++ F +I+ ++P+LIL+S G+DAH+ D LASL
Sbjct: 1382 KGNIVNIPLDPKSSASSFLKAF-SIIIDKLNDYQPELILISCGFDAHMEDHLASLCLLEE 1440
Query: 245 TYYMLAANIKQLAKDLCGSRCVFFLEGGYNLNSL 278
Y + +++++A C R V LEGGYN+N+L
Sbjct: 1441 NYVEITRSLRRVADRWCKGRLVSILEGGYNINAL 1474
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 3/141 (2%)
Query: 104 HHAIPKGPMGFCVFGNVAIAARYAQRAHGLKRVFIIDFDVHHGNGTNDAFYDDPDIFFLS 163
HHA GFC ++ + + H +RV ID DVHHG+G +AFY + +S
Sbjct: 138 HHAKKSEASGFCYVNDIVLGILELLKYH--QRVLYIDIDVHHGDGVEEAFYTTDRVMTVS 195
Query: 164 THQDGSY-PGTGKIDEVGRGDGEGSTLNLPLPGGSGDTAMRTVFHEVIVPCAQRFKPDLI 222
H+ G Y PGTG + ++G G G+ +N+PL G D A ++F +I + F+P +
Sbjct: 196 FHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPIISKVMETFQPAAV 255
Query: 223 LVSAGYDAHVLDPLASLQFTT 243
++ G D+ D L T
Sbjct: 256 VLQCGADSLTGDRLGCFNLTV 276
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,740,103
Number of Sequences: 539616
Number of extensions: 6114629
Number of successful extensions: 13913
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 13606
Number of HSP's gapped (non-prelim): 115
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)