Query 020414
Match_columns 326
No_of_seqs 92 out of 104
Neff 4.3
Searched_HMMs 29240
Date Mon Mar 25 16:30:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020414.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020414hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lrt_A Uncharacterized protein 95.0 0.79 2.7E-05 36.9 13.6 128 149-314 15-143 (152)
2 4hde_A SCO1/SENC family lipopr 94.6 1.1 3.6E-05 37.4 13.9 132 158-314 21-165 (170)
3 3hcz_A Possible thiol-disulfid 94.4 0.33 1.1E-05 37.6 9.6 132 148-315 10-142 (148)
4 3gl3_A Putative thiol:disulfid 94.3 1.2 4.2E-05 34.8 13.0 62 148-210 8-70 (152)
5 3eyt_A Uncharacterized protein 93.5 1.3 4.4E-05 35.0 11.7 54 157-210 16-71 (158)
6 3lor_A Thiol-disulfide isomera 92.8 1.5 5.2E-05 34.5 11.2 60 151-210 11-73 (160)
7 3kij_A Probable glutathione pe 92.3 2.2 7.5E-05 35.2 11.9 60 151-210 20-80 (180)
8 2vup_A Glutathione peroxidase- 92.3 1.6 5.4E-05 36.4 11.2 65 147-211 26-91 (190)
9 3kcm_A Thioredoxin family prot 91.9 2.1 7.2E-05 33.5 10.9 64 148-211 7-71 (154)
10 3cmi_A Peroxiredoxin HYR1; thi 91.9 1.1 3.6E-05 36.6 9.5 52 158-210 21-73 (171)
11 2obi_A PHGPX, GPX-4, phospholi 91.5 2.6 9E-05 34.7 11.6 64 148-211 26-90 (183)
12 3or5_A Thiol:disulfide interch 91.4 4.3 0.00015 31.9 12.5 133 148-314 13-146 (165)
13 3fw2_A Thiol-disulfide oxidore 91.2 1.9 6.4E-05 34.0 10.0 132 145-312 7-144 (150)
14 2p5q_A Glutathione peroxidase 91.1 3.9 0.00013 32.4 11.9 61 151-211 14-75 (170)
15 2l5o_A Putative thioredoxin; s 91.0 2.6 9E-05 32.9 10.6 128 150-315 9-137 (153)
16 3lwa_A Secreted thiol-disulfid 91.0 5.2 0.00018 32.6 12.8 133 147-314 35-176 (183)
17 3fkf_A Thiol-disulfide oxidore 91.0 1.8 6E-05 33.4 9.4 136 143-314 5-144 (148)
18 2lja_A Putative thiol-disulfid 90.7 2.2 7.6E-05 33.3 9.9 126 151-314 12-138 (152)
19 2p31_A CL683, glutathione pero 90.6 3.5 0.00012 34.0 11.6 65 147-211 27-92 (181)
20 3drn_A Peroxiredoxin, bacterio 90.4 5.9 0.0002 31.8 12.5 62 149-210 8-72 (161)
21 2v1m_A Glutathione peroxidase; 90.2 4.6 0.00016 32.0 11.6 63 149-211 11-74 (169)
22 2f9s_A Thiol-disulfide oxidore 90.2 5.5 0.00019 31.1 13.8 125 151-314 8-133 (151)
23 2rli_A SCO2 protein homolog, m 90.0 5.3 0.00018 31.8 11.8 131 153-315 10-160 (171)
24 4fo5_A Thioredoxin-like protei 89.8 0.6 2.1E-05 36.7 5.9 130 148-313 12-142 (143)
25 3hdc_A Thioredoxin family prot 89.7 3.1 0.00011 33.1 10.2 121 146-308 18-139 (158)
26 1jfu_A Thiol:disulfide interch 89.7 5.9 0.0002 32.2 12.1 63 149-211 40-103 (186)
27 2jsy_A Probable thiol peroxida 89.7 1.5 5.3E-05 35.3 8.4 58 151-210 26-85 (167)
28 3dwv_A Glutathione peroxidase- 89.6 0.8 2.8E-05 38.3 6.8 61 151-211 28-89 (187)
29 3raz_A Thioredoxin-related pro 89.5 5.1 0.00017 31.5 11.2 123 157-315 12-136 (151)
30 2ggt_A SCO1 protein homolog, m 89.2 6.4 0.00022 31.0 11.6 129 155-315 9-157 (164)
31 2gs3_A PHGPX, GPX-4, phospholi 88.7 6.3 0.00022 32.6 11.7 66 146-211 26-92 (185)
32 2lrn_A Thiol:disulfide interch 88.3 7.6 0.00026 30.5 11.4 128 151-314 11-139 (152)
33 3ia1_A THIO-disulfide isomeras 88.2 4.4 0.00015 31.7 10.0 129 146-314 8-139 (154)
34 3ewl_A Uncharacterized conserv 87.7 5.4 0.00019 30.7 10.1 60 151-210 9-72 (142)
35 2b7k_A SCO1 protein; metalloch 87.6 9.6 0.00033 32.1 12.3 62 150-211 22-88 (200)
36 3eur_A Uncharacterized protein 85.7 11 0.00037 29.2 12.3 63 148-210 10-76 (142)
37 2b5x_A YKUV protein, TRXY; thi 83.9 12 0.00042 28.4 11.7 122 158-314 18-140 (148)
38 2ywi_A Hypothetical conserved 83.6 17 0.00057 29.7 12.3 63 149-211 24-89 (196)
39 3erw_A Sporulation thiol-disul 83.1 9.5 0.00033 28.9 9.3 131 146-313 12-143 (145)
40 2b1k_A Thiol:disulfide interch 82.5 14 0.00047 29.4 10.4 134 141-315 20-156 (168)
41 3me7_A Putative uncharacterize 81.5 20 0.0007 29.2 12.1 135 151-315 10-158 (170)
42 3kh7_A Thiol:disulfide interch 81.1 21 0.00072 29.1 11.5 131 144-315 31-163 (176)
43 3zrd_A Thiol peroxidase; oxido 80.4 2.1 7E-05 36.7 5.0 57 152-210 61-119 (200)
44 4evm_A Thioredoxin family prot 80.3 15 0.00053 27.1 12.6 128 152-313 5-133 (138)
45 3s9f_A Tryparedoxin; thioredox 76.8 21 0.00072 28.9 9.9 114 153-304 33-149 (165)
46 3u5r_E Uncharacterized protein 76.5 18 0.00061 30.9 9.8 66 146-211 35-102 (218)
47 2hyx_A Protein DIPZ; thioredox 76.1 17 0.00059 34.5 10.5 123 157-313 70-193 (352)
48 1xvw_A Hypothetical protein RV 75.9 3.1 0.00011 33.0 4.5 64 147-210 13-79 (160)
49 3ha9_A Uncharacterized thiored 75.7 27 0.00094 27.5 13.3 63 146-210 14-77 (165)
50 3ztl_A Thioredoxin peroxidase; 75.0 5.8 0.0002 34.3 6.4 70 141-210 38-112 (222)
51 3p7x_A Probable thiol peroxida 74.6 17 0.00057 29.3 8.7 55 152-209 29-85 (166)
52 2k6v_A Putative cytochrome C o 72.5 12 0.00041 29.6 7.2 59 152-211 19-82 (172)
53 2f8a_A Glutathione peroxidase 71.8 27 0.00091 29.9 9.8 60 151-210 28-89 (208)
54 2h30_A Thioredoxin, peptide me 71.6 5.4 0.00019 31.4 4.9 127 157-316 26-153 (164)
55 1psq_A Probable thiol peroxida 71.3 21 0.0007 28.7 8.5 56 152-210 25-83 (163)
56 2a4v_A Peroxiredoxin DOT5; yea 70.8 37 0.0013 26.8 10.1 58 152-210 16-77 (159)
57 1xzo_A BSSCO, hypothetical pro 70.6 26 0.0009 27.7 8.9 62 150-211 14-79 (174)
58 3gkn_A Bacterioferritin comigr 65.8 25 0.00084 27.8 7.8 57 154-210 20-78 (163)
59 1q98_A Thiol peroxidase, TPX; 65.2 52 0.0018 26.4 10.2 51 157-210 31-84 (165)
60 3ixr_A Bacterioferritin comigr 65.2 8.7 0.0003 31.8 5.1 59 151-210 33-94 (179)
61 2yzh_A Probable thiol peroxida 64.8 36 0.0012 27.4 8.7 56 153-210 31-88 (171)
62 1i5g_A Tryparedoxin II; electr 63.4 48 0.0016 25.4 11.1 113 152-301 11-126 (144)
63 1lu4_A Soluble secreted antige 61.0 48 0.0016 24.6 13.6 120 153-314 8-131 (136)
64 1xvq_A Thiol peroxidase; thior 60.5 9.4 0.00032 31.3 4.4 56 152-210 27-84 (175)
65 2cvb_A Probable thiol-disulfid 51.4 94 0.0032 25.0 11.2 62 149-211 13-75 (188)
66 1zzo_A RV1677; thioredoxin fol 50.8 72 0.0024 23.5 12.3 123 151-314 7-130 (136)
67 1kng_A Thiol:disulfide interch 46.1 97 0.0033 23.6 11.7 30 285-314 118-147 (156)
68 1n8j_A AHPC, alkyl hydroperoxi 36.2 92 0.0032 25.6 6.8 53 158-210 17-73 (186)
69 3qpm_A Peroxiredoxin; oxidored 35.0 86 0.003 27.4 6.8 52 158-210 66-120 (240)
70 2c0d_A Thioredoxin peroxidase 34.9 86 0.0029 27.1 6.6 70 140-210 22-99 (221)
71 1o8x_A Tryparedoxin, TRYX, TXN 34.4 1.5E+02 0.0052 22.5 11.5 113 152-302 12-127 (146)
72 2wfc_A Peroxiredoxin 5, PRDX5; 32.3 1.4E+02 0.0046 24.5 7.2 53 157-210 18-76 (167)
73 1qmv_A Human thioredoxin perox 32.1 1.1E+02 0.0039 25.0 6.7 52 158-210 21-77 (197)
74 2r37_A Glutathione peroxidase 31.5 1E+02 0.0035 26.4 6.5 56 151-210 19-79 (207)
75 2rrl_A FLIK, flagellar HOOK-le 31.1 1.1E+02 0.0036 26.8 6.5 56 147-212 96-153 (169)
76 1xcc_A 1-Cys peroxiredoxin; un 30.4 1.1E+02 0.0036 26.5 6.5 52 158-210 20-74 (220)
77 3sbc_A Peroxiredoxin TSA1; alp 30.1 86 0.0029 27.9 5.9 52 159-211 42-96 (216)
78 2pn8_A Peroxiredoxin-4; thiore 29.1 1E+02 0.0034 26.2 6.0 52 158-210 37-91 (211)
79 3nul_A Profilin I; cytoskeleto 29.1 42 0.0014 27.5 3.4 36 268-305 2-39 (130)
80 2i3y_A Epididymal secretory gl 28.8 1E+02 0.0036 26.7 6.2 59 151-210 37-97 (215)
81 1tp9_A Peroxiredoxin, PRX D (t 28.6 1.3E+02 0.0044 24.0 6.3 52 158-210 21-80 (162)
82 1uul_A Tryparedoxin peroxidase 28.1 1.4E+02 0.0049 24.6 6.7 51 160-210 27-79 (202)
83 3tjj_A Peroxiredoxin-4; thiore 27.1 50 0.0017 29.5 3.8 52 158-210 80-134 (254)
84 2i81_A 2-Cys peroxiredoxin; st 26.9 1.5E+02 0.0052 25.1 6.8 52 158-210 38-95 (213)
85 1acf_A Profilin I; protein bin 26.5 32 0.0011 27.9 2.3 33 268-303 2-34 (125)
86 3a2v_A Probable peroxiredoxin; 25.8 2.5E+02 0.0086 25.0 8.3 49 161-210 22-76 (249)
87 1prx_A HORF6; peroxiredoxin, h 25.7 2E+02 0.0067 24.8 7.4 58 152-210 14-74 (224)
88 4g2e_A Peroxiredoxin; redox pr 23.4 27 0.00091 28.2 1.2 54 157-210 18-73 (157)
89 1zye_A Thioredoxin-dependent p 22.9 1.3E+02 0.0043 25.7 5.5 52 158-210 45-99 (220)
90 3uma_A Hypothetical peroxiredo 22.3 1.6E+02 0.0054 24.7 5.9 52 158-210 43-101 (184)
91 2v2g_A Peroxiredoxin 6; oxidor 21.3 1.8E+02 0.0063 25.4 6.4 52 158-210 18-72 (233)
No 1
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=94.95 E-value=0.79 Score=36.86 Aligned_cols=128 Identities=9% Similarity=0.100 Sum_probs=78.2
Q ss_pred ccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCccc
Q 020414 149 LSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPK 227 (326)
Q Consensus 149 L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~ 227 (326)
+-.+.+.-.+|+.+++.+++|..-+|....+ =..+...+...+.+.+++.+.|+.||-|..+...
T Consensus 15 ~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~-------------- 80 (152)
T 2lrt_A 15 IIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDE-------------- 80 (152)
T ss_dssp SCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCH--------------
T ss_pred CCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCH--------------
Confidence 3344454457899999999986544443333 3456667777788888899999999999885320
Q ss_pred ccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCch
Q 020414 228 AAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDW 307 (326)
Q Consensus 228 aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW 307 (326)
+.+. ... . .-.|... .+.+.+..=+.+ .-|+. .-+.++.+..||+|+.+..|..+|
T Consensus 81 ---------~~~~----~~~-~-----~~~~~~~-~d~~~~~~~~~~---~~~v~-~~P~~~lid~~G~i~~~~~g~~~~ 136 (152)
T 2lrt_A 81 ---------HFWK----TSA-D-----NLPWVCV-RDANGAYSSYIS---LYNVT-NLPSVFLVNRNNELSARGENIKDL 136 (152)
T ss_dssp ---------HHHH----HHH-T-----TCSSEEE-ECSSGGGCHHHH---HHTCC-SCSEEEEEETTTEEEEETTTCSCH
T ss_pred ---------HHHH----HHH-h-----CCCceEE-ECCCCcchHHHH---HcCcc-cCceEEEECCCCeEEEecCCHHHH
Confidence 0111 111 0 1223222 122222111111 22442 246789999999999999999999
Q ss_pred HHHHhcC
Q 020414 308 QQIVQEL 314 (326)
Q Consensus 308 ~~lv~eL 314 (326)
.+.+..+
T Consensus 137 e~~~~~~ 143 (152)
T 2lrt_A 137 DEAIKKL 143 (152)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887653
No 2
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=94.59 E-value=1.1 Score=37.41 Aligned_cols=132 Identities=11% Similarity=0.174 Sum_probs=70.4
Q ss_pred CCceeehhhhcCcceeEEEecC--HHHHHHHHHHHHHHHHHHhhc--CcEEEEEEeCCCCCcccccccCCCcccccccCC
Q 020414 158 TNRIVELVQLRGTVRPVILAGR--KETVSLAIQKAERFRTDLLRR--GVLLVPVIWGEGRAPQVEKKGFGLAPKAAAALP 233 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~--~e~V~~Al~~Ae~~r~~L~~r--gVLVVPVv~~~~~~~~~~~kgfG~~~~aa~a~p 233 (326)
+|+.++|++|||..-+|-.--+ ..-+-..+.....+.+.+.+. +|.+|-|.++..... |
T Consensus 21 ~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~Dt-----------------p 83 (170)
T 4hde_A 21 DGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDK-----------------P 83 (170)
T ss_dssp TSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCC-----------------H
T ss_pred CCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccccc-----------------H
Confidence 7899999999996544443322 234666666666666677655 477787777532111 0
Q ss_pred CCchhHHHHhHHHhhhhccccccceEE-EeeChhhHHHHHHHHHhhcCCCCC------CcEEEEEeeCceeeec--CCCC
Q 020414 234 SIGEDFEKRAQSITAKSKLKSEIRFKA-EVVSPSEWERWIRDQQKSEGVTPG------EDVYIILRLDGRVRRS--GKGM 304 (326)
Q Consensus 234 s~~~~~e~~~~~~~a~~~~~~~~rw~A-~Pv~~~eW~~wi~eQ~~~aGv~~~------~gVyi~LrlDGRVr~S--G~G~ 304 (326)
+..+..+.. -......|.. +....++-..+.........-.++ ...++.|..||+|++. |...
T Consensus 84 -------~~l~~y~~~-~~~~~~~~~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~ 155 (170)
T 4hde_A 84 -------ENLKAFIQK-FTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISN 155 (170)
T ss_dssp -------HHHHHHHTT-TCSCCTTEEEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSS
T ss_pred -------HHHHHHHHH-cCCCCCCceecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCC
Confidence 011111111 1122345654 333333444444333211111121 2356789999999976 5555
Q ss_pred CchHHHHhcC
Q 020414 305 PDWQQIVQEL 314 (326)
Q Consensus 305 PpW~~lv~eL 314 (326)
.+-++++++|
T Consensus 156 ~~~~~l~~~i 165 (170)
T 4hde_A 156 TPYEDIIRDM 165 (170)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 6667887765
No 3
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=94.35 E-value=0.33 Score=37.64 Aligned_cols=132 Identities=9% Similarity=0.036 Sum_probs=76.6
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcc
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAP 226 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~ 226 (326)
.+-.+.+.-.+++.+++.+++|..-+|...++ =.++...+...+.+.+.+.+.|+.+|.|..+...
T Consensus 10 ~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~------------- 76 (148)
T 3hcz_A 10 KAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKD------------- 76 (148)
T ss_dssp BCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSS-------------
T ss_pred cCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCH-------------
Confidence 34444444457899999999886444433332 2345556667777888888889999999885311
Q ss_pred cccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCc
Q 020414 227 KAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPD 306 (326)
Q Consensus 227 ~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~Pp 306 (326)
+++.+-.+..-. ..|... .+.+. . .+-.+.-|+ ..-+.++.+..||+|..+..|.+.
T Consensus 77 ----------~~~~~~~~~~~~-------~~~~~~-~d~~~--~--~~~~~~~~i-~~~P~~~lid~~G~i~~~~~g~~~ 133 (148)
T 3hcz_A 77 ----------EEWLKFIRSKKI-------GGWLNV-RDSKN--H--TDFKITYDI-YATPVLYVLDKNKVIIAKRIGYEN 133 (148)
T ss_dssp ----------HHHHHHHHHHTC-------TTSEEE-ECTTC--C--CCHHHHHCC-CSSCEEEEECTTCBEEEESCCGGG
T ss_pred ----------HHHHHHHHHcCC-------CCceEE-ecccc--c--hhHHHhcCc-CCCCEEEEECCCCcEEEecCCHHH
Confidence 111111111100 002211 11110 0 000112244 234678999999999999999999
Q ss_pred hHHHHhcCC
Q 020414 307 WQQIVQELP 315 (326)
Q Consensus 307 W~~lv~eLP 315 (326)
..++++++-
T Consensus 134 ~~~~l~~l~ 142 (148)
T 3hcz_A 134 LDDFLVQYE 142 (148)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999888764
No 4
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=94.28 E-value=1.2 Score=34.78 Aligned_cols=62 Identities=13% Similarity=0.111 Sum_probs=46.0
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+-.+.+.- +++.+++.+++|..-+|...+ .=.++...+...+.+.+.+.+.|+.||.|..+
T Consensus 8 ~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 70 (152)
T 3gl3_A 8 KAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD 70 (152)
T ss_dssp BCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred cCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 344555555 788999999998754444333 34567778888888999999999999999875
No 5
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=93.45 E-value=1.3 Score=35.00 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=40.1
Q ss_pred CCCceeehhhhcCcceeEEEec-CHHHHHH-HHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 157 STNRIVELVQLRGTVRPVILAG-RKETVSL-AIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 157 ~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~-Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+++.+++.+++|..-+|...+ .=..+.. ++...+.+.+++.+.+|.+|-|.++
T Consensus 16 ~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~ 71 (158)
T 3eyt_A 16 NSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV 71 (158)
T ss_dssp SCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred cCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec
Confidence 4679999999998654443333 3345666 5777788888888889999999885
No 6
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=92.77 E-value=1.5 Score=34.54 Aligned_cols=60 Identities=13% Similarity=0.048 Sum_probs=43.2
Q ss_pred CCeeee-CCCceeehhhhcCcceeEEE-ecCHHHHHH-HHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRL-STNRIVELVQLRGTVRPVIL-AGRKETVSL-AIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l-~~~r~v~L~qLRg~aRvVIv-AG~~e~V~~-Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.- -+|+.+++.+++|..-+|.. +-.=..+.. .+...+.+.+++.+.||.||-|..+
T Consensus 11 ~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~ 73 (160)
T 3lor_A 11 ELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV 73 (160)
T ss_dssp CCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc
Confidence 344442 46799999999986544443 334456666 5778888888898899999999885
No 7
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=92.26 E-value=2.2 Score=35.17 Aligned_cols=60 Identities=12% Similarity=0.127 Sum_probs=44.0
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEE-ecCHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVIL-AGRKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIv-AG~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.-.+|+.+++++++|..-+|.. |-.=..+...+...+.+.+++.+.|+.||-|..+
T Consensus 20 ~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d 80 (180)
T 3kij_A 20 AFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCN 80 (180)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECC
T ss_pred ceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECC
Confidence 34444447899999999997443333 2223367777888888889999999999999875
No 8
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=92.26 E-value=1.6 Score=36.44 Aligned_cols=65 Identities=9% Similarity=0.081 Sum_probs=46.5
Q ss_pred hhccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 147 ETLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 147 e~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
+.+-.+.+.-.+|+.+++.+++|..-+|...++ =..+...+...+.+.+++.+++|.||-|..+.
T Consensus 26 ~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 26 SSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp CSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred CcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 334444444447899999999997554444332 34666777788888889999999999998863
No 9
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=91.89 E-value=2.1 Score=33.50 Aligned_cols=64 Identities=17% Similarity=0.175 Sum_probs=46.4
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
.+-.+.+.-.+++.+++.+++|..-+|...++ -.++...+...+.+.+.+.+.++.+|-|..+.
T Consensus 7 ~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~ 71 (154)
T 3kcm_A 7 PAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDE 71 (154)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCT
T ss_pred CCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCC
Confidence 34445555557899999999986554444333 35677777788888888988899999998853
No 10
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=91.89 E-value=1.1 Score=36.60 Aligned_cols=52 Identities=13% Similarity=0.161 Sum_probs=39.0
Q ss_pred CCceeehhhhcCcceeEEE-ecCHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVIL-AGRKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIv-AG~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+|+.+++++++|..-+|.. |..-..+. .+...+.+.+++.+.||.||-|..+
T Consensus 21 ~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 21 KGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp TSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 7899999999996544433 22233566 6777778888899999999999885
No 11
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=91.52 E-value=2.6 Score=34.70 Aligned_cols=64 Identities=11% Similarity=0.147 Sum_probs=45.8
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
.+-.+.+.-.+|+.+++.+++|..-+|...+ .=..+...+...+.+.+++.++++.||-|..+.
T Consensus 26 ~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 90 (183)
T 2obi_A 26 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 90 (183)
T ss_dssp SGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred cccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 3344555545789999999999654444333 234666777788888889999999999998853
No 12
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=91.40 E-value=4.3 Score=31.92 Aligned_cols=133 Identities=12% Similarity=0.101 Sum_probs=77.9
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcc
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAP 226 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~ 226 (326)
.+-.+.+.-.+++.+++.+++|..-+|...++ =.++...+...+.+.+.+.+.+|.+|.|..++. +
T Consensus 13 ~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~--~----------- 79 (165)
T 3or5_A 13 PAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQ--L----------- 79 (165)
T ss_dssp BCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCC--H-----------
T ss_pred CCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCC--H-----------
Confidence 33445555557899999999986554444433 456777778888888899999999999987531 0
Q ss_pred cccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCc
Q 020414 227 KAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPD 306 (326)
Q Consensus 227 ~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~Pp 306 (326)
+...+-.+.. .-.|.... +.++..+-+... ...|+ ..-+.++.+..||+|+.+-.|..+
T Consensus 80 ----------~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~-~~~~i-~~~P~~~lid~~G~i~~~~~g~~~ 138 (165)
T 3or5_A 80 ----------PNVKNYMKTQ--------GIIYPVMM-ATPELIRAFNGY-IDGGI-TGIPTSFVIDASGNVSGVIVGPRS 138 (165)
T ss_dssp ----------HHHHHHHHHH--------TCCSCEEE-CCHHHHHHHHTT-STTCS-CSSSEEEEECTTSBEEEEECSCCC
T ss_pred ----------HHHHHHHHHc--------CCCCceEe-cCHHHHHHHhhh-hccCC-CCCCeEEEECCCCcEEEEEcCCCC
Confidence 0111000111 11222221 111111111000 01144 235678999999999999999888
Q ss_pred hHHHHhcC
Q 020414 307 WQQIVQEL 314 (326)
Q Consensus 307 W~~lv~eL 314 (326)
-+++.+.|
T Consensus 139 ~~~l~~~l 146 (165)
T 3or5_A 139 KADFDRIV 146 (165)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766554
No 13
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=91.24 E-value=1.9 Score=34.02 Aligned_cols=132 Identities=5% Similarity=0.052 Sum_probs=76.0
Q ss_pred hhhhccCCeeeeCCCceeehh--hhcCcceeEEEecC-HHH--HHHHHHHHHHHHHHH-hhcCcEEEEEEeCCCCCcccc
Q 020414 145 RDETLSRLPLRLSTNRIVELV--QLRGTVRPVILAGR-KET--VSLAIQKAERFRTDL-LRRGVLLVPVIWGEGRAPQVE 218 (326)
Q Consensus 145 REe~L~rL~V~l~~~r~v~L~--qLRg~aRvVIvAG~-~e~--V~~Al~~Ae~~r~~L-~~rgVLVVPVv~~~~~~~~~~ 218 (326)
-++.+-.+.+.-.+|+.+++. +++|..-+|....+ =.. +...+...+.+.+++ .+.|+-||-|..+.. +
T Consensus 7 ~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~--~--- 81 (150)
T 3fw2_A 7 IGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVD--K--- 81 (150)
T ss_dssp TTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSC--H---
T ss_pred CCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCC--H---
Confidence 344455556665688999999 99986444433322 234 666777777888888 888999999988531 0
Q ss_pred cccCCCcccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceee
Q 020414 219 KKGFGLAPKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVR 298 (326)
Q Consensus 219 ~kgfG~~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr 298 (326)
+++. .... ...-.|... .+...+..-+. +.-|+. .-+.++.+..||+|+
T Consensus 82 ------------------~~~~----~~~~----~~~~~~~~~-~d~~~~~~~~~---~~~~v~-~~P~~~lid~~G~i~ 130 (150)
T 3fw2_A 82 ------------------QQWK----DAIK----RDTLDWEQV-CDFGGLNSEVA---KQYSIY-KIPANILLSSDGKIL 130 (150)
T ss_dssp ------------------HHHH----HHHH----HTTCCSEEE-CCSCGGGCHHH---HHTTCC-SSSEEEEECTTSBEE
T ss_pred ------------------HHHH----HHHH----HhCCCceEE-EcCcccchHHH---HHcCCC-ccCeEEEECCCCEEE
Confidence 1111 1110 011233322 22222222222 233552 356789999999999
Q ss_pred ecCCCCCchHHHHh
Q 020414 299 RSGKGMPDWQQIVQ 312 (326)
Q Consensus 299 ~SG~G~PpW~~lv~ 312 (326)
.+..+.....+.++
T Consensus 131 ~~~~~~~~l~~~l~ 144 (150)
T 3fw2_A 131 AKNLRGEELKKKIE 144 (150)
T ss_dssp EESCCHHHHHHHHH
T ss_pred EccCCHHHHHHHHH
Confidence 99874444444444
No 14
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=91.13 E-value=3.9 Score=32.43 Aligned_cols=61 Identities=8% Similarity=0.150 Sum_probs=44.1
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
.+.+.-.+|+.+++.+++|..-+|....+ =..+...+...+.+.+++.+.|+.||-|..+.
T Consensus 14 ~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~ 75 (170)
T 2p5q_A 14 DFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQ 75 (170)
T ss_dssp GCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred ceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCC
Confidence 34444447899999999986544443332 23677777788888889999999999998853
No 15
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=91.00 E-value=2.6 Score=32.86 Aligned_cols=128 Identities=14% Similarity=0.142 Sum_probs=76.9
Q ss_pred cCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcccc
Q 020414 150 SRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKA 228 (326)
Q Consensus 150 ~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~a 228 (326)
-.+.+.--+|+.+++.++++..-+|...++ =.++...+...+.+.+.+.+.++.||.|..+.++.
T Consensus 9 p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~-------------- 74 (153)
T 2l5o_A 9 PAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPI-------------- 74 (153)
T ss_dssp CSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCH--------------
T ss_pred CCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCH--------------
Confidence 344444447899999999987655555433 34566677777778888888899999987642111
Q ss_pred cccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchH
Q 020414 229 AAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQ 308 (326)
Q Consensus 229 a~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~ 308 (326)
++.. ..... -.-.| |+..+.-.. + .+.-|+. .-+.++.+..||+|+..-.|.+++.
T Consensus 75 --------~~~~----~~~~~----~~~~~---~~~~d~~~~-~---~~~~~i~-~~P~~~lid~~G~i~~~~~g~~~~~ 130 (153)
T 2l5o_A 75 --------ESVR----QYVKD----YGLPF---TVMYDADKA-V---GQAFGTQ-VYPTSVLIGKKGEILKTYVGEPDFG 130 (153)
T ss_dssp --------HHHH----HHHHH----TTCCS---EEEECSSCH-H---HHHHTCC-SSSEEEEECSSSCCCEEEESSCCHH
T ss_pred --------HHHH----HHHHH----cCCCc---eEEcCchHH-H---HHHcCCC-ccCeEEEECCCCcEEEEEcCCCCHH
Confidence 1111 11100 01112 222221111 1 1222442 2467889999999999989999998
Q ss_pred HHHhcCC
Q 020414 309 QIVQELP 315 (326)
Q Consensus 309 ~lv~eLP 315 (326)
++.+.|-
T Consensus 131 ~l~~~l~ 137 (153)
T 2l5o_A 131 KLYQEID 137 (153)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877653
No 16
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=91.00 E-value=5.2 Score=32.60 Aligned_cols=133 Identities=8% Similarity=-0.010 Sum_probs=77.6
Q ss_pred hhccCCeeeeC--CCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCc------EEEEEEeCCCCCccc
Q 020414 147 ETLSRLPLRLS--TNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGV------LLVPVIWGEGRAPQV 217 (326)
Q Consensus 147 e~L~rL~V~l~--~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgV------LVVPVv~~~~~~~~~ 217 (326)
+.+-.+.+.-- +++.+++.+++|..-+|...++ =.++...+..-+.+.+++.++|+ .+|-|..+..+..
T Consensus 35 ~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~-- 112 (183)
T 3lwa_A 35 QQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRD-- 112 (183)
T ss_dssp CCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHH--
T ss_pred CCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHH--
Confidence 44556666666 8899999999996555544443 34577777788888899999998 9999988531111
Q ss_pred ccccCCCcccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCcee
Q 020414 218 EKKGFGLAPKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRV 297 (326)
Q Consensus 218 ~~kgfG~~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRV 297 (326)
... ..... -.-.|... .+.+. .+..+...-++ ..-+.++.+..||+|
T Consensus 113 --------------------~~~----~~~~~----~~~~~~~~-~d~~~---~~~~~~~~~~v-~~~P~~~lid~~G~i 159 (183)
T 3lwa_A 113 --------------------IAQ----DFVTD----NGLDYPSI-YDPPF---MTAASLGGVPA-SVIPTTIVLDKQHRP 159 (183)
T ss_dssp --------------------HHH----HHHHH----TTCCSCEE-ECTTC---GGGGGTTTCCT-TCCSEEEEECTTSCE
T ss_pred --------------------HHH----HHHHH----cCCCccEE-ECCcc---hHHHHhccCCC-CCCCeEEEECCCCcE
Confidence 011 11000 01112211 11110 00000000012 234668899999999
Q ss_pred eecCCCCCchHHHHhcC
Q 020414 298 RRSGKGMPDWQQIVQEL 314 (326)
Q Consensus 298 r~SG~G~PpW~~lv~eL 314 (326)
+.+-.|.++..++.+.|
T Consensus 160 ~~~~~g~~~~~~l~~~l 176 (183)
T 3lwa_A 160 AAVFLREVTSKDVLDVA 176 (183)
T ss_dssp EEEECSCCCHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHH
Confidence 99999998887776654
No 17
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=90.95 E-value=1.8 Score=33.38 Aligned_cols=136 Identities=10% Similarity=0.094 Sum_probs=80.5
Q ss_pred hhhhhhccCCeeeeCCCceeehh--hhcCcceeEEEecC-HHHHHHHHHHHHHHHHHH-hhcCcEEEEEEeCCCCCcccc
Q 020414 143 ISRDETLSRLPLRLSTNRIVELV--QLRGTVRPVILAGR-KETVSLAIQKAERFRTDL-LRRGVLLVPVIWGEGRAPQVE 218 (326)
Q Consensus 143 i~REe~L~rL~V~l~~~r~v~L~--qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L-~~rgVLVVPVv~~~~~~~~~~ 218 (326)
+.-++.+-.+.+.-.+++.+++. +++|..-+|...++ =.++...+...+.+.+.+ .+.|+.+|.|..+...
T Consensus 5 ~~~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~----- 79 (148)
T 3fkf_A 5 VTVGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDR----- 79 (148)
T ss_dssp CCTTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCH-----
T ss_pred ccCCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCH-----
Confidence 34455556666666688999999 99886544444432 234667777777888888 8889999999885320
Q ss_pred cccCCCcccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceee
Q 020414 219 KKGFGLAPKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVR 298 (326)
Q Consensus 219 ~kgfG~~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr 298 (326)
+++. .... ...-.|... .+...|..-+.+ .-|+. .-+.++.+..||+|.
T Consensus 80 ------------------~~~~----~~~~----~~~~~~~~~-~d~~~~~~~~~~---~~~v~-~~P~~~lid~~G~i~ 128 (148)
T 3fkf_A 80 ------------------EAWE----TAIK----KDTLSWDQV-CDFTGLSSETAK---QYAIL-TLPTNILLSPTGKIL 128 (148)
T ss_dssp ------------------HHHH----HHHH----HTTCCSEEE-CCSCGGGCHHHH---HTTCC-SSSEEEEECTTSBEE
T ss_pred ------------------HHHH----HHHH----HcCCCceEE-EccCCcchHHHH---hcCCC-CcCEEEEECCCCeEE
Confidence 1111 1110 011233322 222222222222 23442 356789999999999
Q ss_pred ecCCCCCchHHHHhcC
Q 020414 299 RSGKGMPDWQQIVQEL 314 (326)
Q Consensus 299 ~SG~G~PpW~~lv~eL 314 (326)
.+..+.....+.++++
T Consensus 129 ~~~~~~~~l~~~l~~l 144 (148)
T 3fkf_A 129 ARDIQGEALTGKLKEL 144 (148)
T ss_dssp EESCCHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHH
Confidence 9988555555555543
No 18
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=90.66 E-value=2.2 Score=33.25 Aligned_cols=126 Identities=10% Similarity=0.135 Sum_probs=71.5
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCccccc
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAA 229 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa 229 (326)
.+.+.-.+|+.+++.+++|..-+|...++ =.++...+...+.+.+.+.+.++.+|-|..+...
T Consensus 12 ~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~---------------- 75 (152)
T 2lja_A 12 SFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNK---------------- 75 (152)
T ss_dssp SCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCH----------------
T ss_pred ccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcH----------------
Confidence 45555557899999999986555544432 2345555555566777777889999998875311
Q ss_pred ccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHH
Q 020414 230 AALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQ 309 (326)
Q Consensus 230 ~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~ 309 (326)
+++.+-.+.. .-.|.-...+.+. -+. +.-|+. .-+.++.+..||+|..+..|.++-++
T Consensus 76 -------~~~~~~~~~~--------~~~~~~~~~d~~~---~~~---~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~ 133 (152)
T 2lja_A 76 -------KAWENMVTKD--------QLKGIQLHMGTDR---TFM---DAYLIN-GIPRFILLDRDGKIISANMTRPSDPK 133 (152)
T ss_dssp -------HHHHHHHHHH--------TCCSEEEECSSCT---HHH---HHTTCC-SSCCEEEECTTSCEEESSCCCTTCHH
T ss_pred -------HHHHHHHHhc--------CCCCceeecCcch---hHH---HHcCcC-CCCEEEEECCCCeEEEccCCCCCHHH
Confidence 0111110111 1122222222210 111 223442 23568899999999999999887666
Q ss_pred HHhcC
Q 020414 310 IVQEL 314 (326)
Q Consensus 310 lv~eL 314 (326)
+.+.|
T Consensus 134 l~~~l 138 (152)
T 2lja_A 134 TAEKF 138 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 19
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=90.61 E-value=3.5 Score=34.02 Aligned_cols=65 Identities=12% Similarity=0.136 Sum_probs=46.6
Q ss_pred hhccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 147 ETLSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 147 e~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
..+-...+.-.+|+.+++.+++|..-+|..-+ .=..+...+..-+.+.+++.++|+-||-|..+.
T Consensus 27 ~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~ 92 (181)
T 2p31_A 27 QDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQ 92 (181)
T ss_dssp CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcC
Confidence 34445555555789999999999654444332 234677777788888889999999999998753
No 20
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=90.41 E-value=5.9 Score=31.80 Aligned_cols=62 Identities=10% Similarity=-0.058 Sum_probs=45.8
Q ss_pred ccCCeeeeCCCceeehhhhcCcceeEEEec---CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 149 LSRLPLRLSTNRIVELVQLRGTVRPVILAG---RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 149 L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG---~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+-.+.+.-.+|+.+++.+++|...+||.-. .-..+...+..-+.+.+++.+.||-||-|..+
T Consensus 8 ~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d 72 (161)
T 3drn_A 8 APLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD 72 (161)
T ss_dssp CCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC
T ss_pred CCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 334455555889999999999874444333 34566777888888889999999999998773
No 21
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=90.25 E-value=4.6 Score=32.00 Aligned_cols=63 Identities=13% Similarity=0.217 Sum_probs=45.5
Q ss_pred ccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 149 LSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 149 L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
+-.+.+.-.+|+.+++.+++|..-+|.... .=..+...+...+.+.+++.++|+-||-|..+.
T Consensus 11 ~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 11 IYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp GGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred cccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 344455555789999999999654444332 233666777788888889999999999998853
No 22
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=90.17 E-value=5.5 Score=31.08 Aligned_cols=125 Identities=16% Similarity=0.149 Sum_probs=74.0
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCccccc
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAA 229 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa 229 (326)
.+.+.-.+|+.+++.+++|..-+|....+ =.++...+...+.+.+.+.+.++.||.|..+...
T Consensus 8 ~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~---------------- 71 (151)
T 2f9s_A 8 NFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESK---------------- 71 (151)
T ss_dssp CCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCH----------------
T ss_pred cceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCH----------------
Confidence 33444447899999999986544444332 3567777777778888888889999999885310
Q ss_pred ccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHH
Q 020414 230 AALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQ 309 (326)
Q Consensus 230 ~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~ 309 (326)
+... ..... ..-.| |+..+.-.. ..+.-|+. .-+.++.+..||+|+.+-.|.++...
T Consensus 72 -------~~~~----~~~~~----~~~~~---~~~~d~~~~----~~~~~~v~-~~P~~~lid~~G~i~~~~~G~~~~~~ 128 (151)
T 2f9s_A 72 -------IAVH----NFMKS----YGVNF---PVVLDTDRQ----VLDAYDVS-PLPTTFLINPEGKVVKVVTGTMTESM 128 (151)
T ss_dssp -------HHHH----HHHHH----HTCCS---CEEEETTSH----HHHHTTCC-SSCEEEEECTTSEEEEEEESCCCHHH
T ss_pred -------HHHH----HHHHH----cCCCc---eEEECCchH----HHHhcCCC-CCCeEEEECCCCcEEEEEeCCCCHHH
Confidence 0111 11100 01112 222221111 11233552 34678889999999999889888776
Q ss_pred HHhcC
Q 020414 310 IVQEL 314 (326)
Q Consensus 310 lv~eL 314 (326)
+.+.|
T Consensus 129 l~~~l 133 (151)
T 2f9s_A 129 IHDYM 133 (151)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 23
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=89.98 E-value=5.3 Score=31.77 Aligned_cols=131 Identities=15% Similarity=0.028 Sum_probs=73.9
Q ss_pred eeeeCCCceeehhhhcCcceeEEEecC-HHH-HHHHHHHHHHHHHHHhh----cCcEEEEEEeCCCCCcccccccCCCcc
Q 020414 153 PLRLSTNRIVELVQLRGTVRPVILAGR-KET-VSLAIQKAERFRTDLLR----RGVLLVPVIWGEGRAPQVEKKGFGLAP 226 (326)
Q Consensus 153 ~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~-V~~Al~~Ae~~r~~L~~----rgVLVVPVv~~~~~~~~~~~kgfG~~~ 226 (326)
.+.-.+|+.+++.+++|..-+|..-++ =.. +...+..-+.+.+++.+ .+|-||-|..+......
T Consensus 10 ~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~---------- 79 (171)
T 2rli_A 10 HLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDV---------- 79 (171)
T ss_dssp EEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCH----------
T ss_pred EEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECCCCCCH----------
Confidence 333347899999999986444333333 233 77777777778888875 58999998885321110
Q ss_pred cccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCC--CC------------CcEEEEEe
Q 020414 227 KAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVT--PG------------EDVYIILR 292 (326)
Q Consensus 227 ~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~--~~------------~gVyi~Lr 292 (326)
+ ..+.... .-...|....-..++ ..+-.+.-|+. |. .+.++.+.
T Consensus 80 ----------~----~~~~~~~----~~~~~~~~l~~~~~~----~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid 137 (171)
T 2rli_A 80 ----------E----AMARYVQ----DFHPRLLGLTGSTKQ----VAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLN 137 (171)
T ss_dssp ----------H----HHHHHHH----TTCTTCCEEECCHHH----HHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEEC
T ss_pred ----------H----HHHHHHH----HcCCCeEEEeCCHHH----HHHHHHHhCeEEEecCCCCCCCeEEeccceEEEEC
Confidence 0 0111111 112234333222111 11111233441 11 12689999
Q ss_pred eCceeeecCCCCCchHHHHhcCC
Q 020414 293 LDGRVRRSGKGMPDWQQIVQELP 315 (326)
Q Consensus 293 lDGRVr~SG~G~PpW~~lv~eLP 315 (326)
.||+|+.+-.|..+..++.+.|-
T Consensus 138 ~~G~i~~~~~g~~~~~~l~~~l~ 160 (171)
T 2rli_A 138 PDGLFTDYYGRSRSAEQISDSVR 160 (171)
T ss_dssp TTSCEEEEEESSCCHHHHHHHHH
T ss_pred CCCeEEEEECCCCCHHHHHHHHH
Confidence 99999999889888887776653
No 24
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=89.83 E-value=0.6 Score=36.66 Aligned_cols=130 Identities=7% Similarity=0.020 Sum_probs=69.6
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcc
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAP 226 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~ 226 (326)
.+-.+.+ -.+++.+++++++|..-+|...++ -..+...+...+.+.+++.+.++.||-|.++.. +
T Consensus 12 ~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~--~----------- 77 (143)
T 4fo5_A 12 LAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEK--E----------- 77 (143)
T ss_dssp BCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSC--H-----------
T ss_pred cCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCC--H-----------
Confidence 3334445 236789999999996444433333 344666667777777788878999999988532 0
Q ss_pred cccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCc
Q 020414 227 KAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPD 306 (326)
Q Consensus 227 ~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~Pp 306 (326)
+++.+-.+.. .-.|-..-.+...|..=+. +.-|+. .-+.++.+..||+|+.+..+...
T Consensus 78 ----------~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~---~~~~v~-~~P~~~lid~~G~i~~~~~~~~~ 135 (143)
T 4fo5_A 78 ----------SIFTETVKID--------KLDLSTQFHEGLGKESELY---KKYDLR-KGFKNFLINDEGVIIAANVTPEK 135 (143)
T ss_dssp ----------HHHHHHHHHH--------TCCGGGEEECTTGGGSHHH---HHTTGG-GCCCEEEECTTSBEEEESCCHHH
T ss_pred ----------HHHHHHHHHh--------CCCCceeeecccccchHHH---HHcCCC-CCCcEEEECCCCEEEEccCCHHH
Confidence 1111111111 1122111122222221111 223442 23458899999999999887655
Q ss_pred hHHHHhc
Q 020414 307 WQQIVQE 313 (326)
Q Consensus 307 W~~lv~e 313 (326)
..+++++
T Consensus 136 l~~~l~~ 142 (143)
T 4fo5_A 136 LTEILKA 142 (143)
T ss_dssp HHHHHTC
T ss_pred HHHHHHh
Confidence 5555554
No 25
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=89.74 E-value=3.1 Score=33.11 Aligned_cols=121 Identities=13% Similarity=0.143 Sum_probs=75.4
Q ss_pred hhhccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCC
Q 020414 146 DETLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGL 224 (326)
Q Consensus 146 Ee~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~ 224 (326)
.+.+-.+.+.-.+++.+++.+++|..-+|...++ =.++...+...+.+.+++.+.++.+|.|..+.....
T Consensus 18 G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~--------- 88 (158)
T 3hdc_A 18 GALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKRFPE--------- 88 (158)
T ss_dssp TSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSSCCG---------
T ss_pred CCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHHHHH---------
Confidence 4444555565558899999999986544444433 346777777888888889888999999988541111
Q ss_pred cccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCC
Q 020414 225 APKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGM 304 (326)
Q Consensus 225 ~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~ 304 (326)
|-+ .....| |+..+.-. +-.+.-|+. .-+.++.+..||+|+.+-.|.
T Consensus 89 --------------~~~-----------~~~~~~---~~~~d~~~----~~~~~~~v~-~~P~~~lid~~G~i~~~~~G~ 135 (158)
T 3hdc_A 89 --------------KYR-----------RAPVSF---NFLSDATG----QVQQRYGAN-RLPDTFIVDRKGIIRQRVTGG 135 (158)
T ss_dssp --------------GGG-----------GCCCSC---EEEECTTS----HHHHHTTCC-SSSEEEEECTTSBEEEEEESC
T ss_pred --------------HHH-----------HcCCCc---eEEECchH----HHHHHhCCC-CcceEEEEcCCCCEEEEEeCC
Confidence 100 001112 21111100 111233442 346789999999999999999
Q ss_pred CchH
Q 020414 305 PDWQ 308 (326)
Q Consensus 305 PpW~ 308 (326)
.+|+
T Consensus 136 ~~~~ 139 (158)
T 3hdc_A 136 IEWD 139 (158)
T ss_dssp CCTT
T ss_pred Cccc
Confidence 9986
No 26
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=89.71 E-value=5.9 Score=32.24 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=44.3
Q ss_pred ccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 149 LSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 149 L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
+-.+.+.-.+|+.+++.+++|..-+|...++ =..+...+...+.+.+.+.+.++-||-|..+.
T Consensus 40 ~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 103 (186)
T 1jfu_A 40 LPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDT 103 (186)
T ss_dssp CCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCC
T ss_pred CCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCC
Confidence 3344444447899999999987555544433 34666677777777888888899999998863
No 27
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=89.67 E-value=1.5 Score=35.28 Aligned_cols=58 Identities=9% Similarity=0.081 Sum_probs=41.3
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC--HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR--KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~--~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
...+.-.+|+.+++.+++|..-++....+ -..+...+..-+.+.+++ .++-||-|..+
T Consensus 26 ~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d 85 (167)
T 2jsy_A 26 DFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD 85 (167)
T ss_dssp CCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS
T ss_pred ceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC
Confidence 34444447899999999987544443333 467777777777777777 78999998875
No 28
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=89.59 E-value=0.8 Score=38.28 Aligned_cols=61 Identities=10% Similarity=0.065 Sum_probs=42.8
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
...+.-.+|+.++|++++|..-+|..-++ =..+...+...+.+.+++.+.|+.||-|.++.
T Consensus 28 ~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 89 (187)
T 3dwv_A 28 DFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQ 89 (187)
T ss_dssp GSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCC
T ss_pred CeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcc
Confidence 34444447899999999996544433222 22366667777888889999999999998863
No 29
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=89.49 E-value=5.1 Score=31.50 Aligned_cols=123 Identities=11% Similarity=0.067 Sum_probs=72.7
Q ss_pred CCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcccccccCCCC
Q 020414 157 STNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAAAALPSI 235 (326)
Q Consensus 157 ~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~a~ps~ 235 (326)
.+|+.+++.+++|..-+|...++ =..+...+..-+.+.+++.+.++.||.|..+.. .
T Consensus 12 ~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~--~-------------------- 69 (151)
T 3raz_A 12 KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTS--D-------------------- 69 (151)
T ss_dssp TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCH--H--------------------
T ss_pred cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCh--H--------------------
Confidence 47899999999996554444443 244666666777777778788999999988421 0
Q ss_pred chhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCC-CCCCcEEEEEeeCceeeecCCCCCchHHHHhcC
Q 020414 236 GEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGV-TPGEDVYIILRLDGRVRRSGKGMPDWQQIVQEL 314 (326)
Q Consensus 236 ~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv-~~~~gVyi~LrlDGRVr~SG~G~PpW~~lv~eL 314 (326)
+. +..... -.-.|.......+.-.. -.+.-|. ...-+.++.+..||+|+.+-.|..+.+++.+.|
T Consensus 70 --~~----~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 135 (151)
T 3raz_A 70 --NI----GNFLKQ----TPVSYPIWRYTGANSRN----FMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAV 135 (151)
T ss_dssp --HH----HHHHHH----SCCSSCEEEECCSCHHH----HHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHH
T ss_pred --HH----HHHHHH----cCCCCceEecCccchHH----HHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHH
Confidence 00 011100 11122222111111111 1122231 123467899999999999999999988887665
Q ss_pred C
Q 020414 315 P 315 (326)
Q Consensus 315 P 315 (326)
-
T Consensus 136 ~ 136 (151)
T 3raz_A 136 K 136 (151)
T ss_dssp H
T ss_pred H
Confidence 3
No 30
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=89.16 E-value=6.4 Score=30.96 Aligned_cols=129 Identities=9% Similarity=0.011 Sum_probs=75.6
Q ss_pred eeCCCceeehhhhcCcceeEEEecC-HH-HHHHHHHHHHHHHHHHhh----cCcEEEEEEeCCCCCcccccccCCCcccc
Q 020414 155 RLSTNRIVELVQLRGTVRPVILAGR-KE-TVSLAIQKAERFRTDLLR----RGVLLVPVIWGEGRAPQVEKKGFGLAPKA 228 (326)
Q Consensus 155 ~l~~~r~v~L~qLRg~aRvVIvAG~-~e-~V~~Al~~Ae~~r~~L~~----rgVLVVPVv~~~~~~~~~~~kgfG~~~~a 228 (326)
.-.+|+.+++.+++|..-+|....+ =. .+...+...+.+.+++.+ .++-||-|..+......
T Consensus 9 ~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~------------ 76 (164)
T 2ggt_A 9 TTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPERDTK------------ 76 (164)
T ss_dssp EETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCH------------
T ss_pred EeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCH------------
Confidence 3347899999999986544443332 23 377777777888888877 48999988885321110
Q ss_pred cccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCC--C-----CC-------cEEEEEeeC
Q 020414 229 AAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVT--P-----GE-------DVYIILRLD 294 (326)
Q Consensus 229 a~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~--~-----~~-------gVyi~LrlD 294 (326)
+ ..+.... .-...|...+-+.+.-.+ -.+.-|+. | +. ..++.+..|
T Consensus 77 -----------~-~~~~~~~----~~~~~~~~l~~~~d~~~~----~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~ 136 (164)
T 2ggt_A 77 -----------E-AIANYVK----EFSPKLVGLTGTREEVDQ----VARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPD 136 (164)
T ss_dssp -----------H-HHHHHHH----TTCSSCEEEECCHHHHHH----HHHTTTCCEEEEEECTTSCEEEEECCEEEEECTT
T ss_pred -----------H-HHHHHHH----HcCCCeEEEeCCHHHHHH----HHHhcCeEEEecCCCCCCCeeEeccceEEEECCC
Confidence 0 1111111 112345444333222111 11233441 2 11 168899999
Q ss_pred ceeeecCCCCCchHHHHhcCC
Q 020414 295 GRVRRSGKGMPDWQQIVQELP 315 (326)
Q Consensus 295 GRVr~SG~G~PpW~~lv~eLP 315 (326)
|+|+.+-.|.++..++.+.|.
T Consensus 137 G~i~~~~~g~~~~~~l~~~l~ 157 (164)
T 2ggt_A 137 GEFLDYFGQNKRKGEIAASIA 157 (164)
T ss_dssp SCEEEEEETTCCHHHHHHHHH
T ss_pred CeEEEEeCCCCCHHHHHHHHH
Confidence 999999999888888877653
No 31
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=88.72 E-value=6.3 Score=32.57 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=47.0
Q ss_pred hhhccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 146 DETLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 146 Ee~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
.+.+-.+.+.-.+|+.+++.+++|..-+|..-++ =..+...+...+.+.+++.++|+-||.|..+.
T Consensus 26 g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~ 92 (185)
T 2gs3_A 26 ARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 92 (185)
T ss_dssp CCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred CCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcc
Confidence 4445555555557899999999996444433322 23566777778888888999999999998853
No 32
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=88.27 E-value=7.6 Score=30.50 Aligned_cols=128 Identities=12% Similarity=0.040 Sum_probs=74.9
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCccccc
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAA 229 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa 229 (326)
.+.+.-.+|+.+++.+++|..-+|...++ =..+...+...+.+.+.+.+.++.|+-|..+.. .
T Consensus 11 ~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~--~-------------- 74 (152)
T 2lrn_A 11 AITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRR--E-------------- 74 (152)
T ss_dssp CCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSC--H--------------
T ss_pred CceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCC--H--------------
Confidence 34444447899999999986554444332 345777777778888888888999999987521 0
Q ss_pred ccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHH
Q 020414 230 AALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQ 309 (326)
Q Consensus 230 ~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~ 309 (326)
+++.+-.+. ....|.... +...|..-+. +.-|+. .-+.++.+..||+|+.+..+.....+
T Consensus 75 -------~~~~~~~~~--------~~~~~~~~~-d~~~~~~~~~---~~~~v~-~~P~~~lid~~G~i~~~~~~~~~l~~ 134 (152)
T 2lrn_A 75 -------EDWKKAIEE--------DKSYWNQVL-LQKDDVKDVL---ESYCIV-GFPHIILVDPEGKIVAKELRGDDLYN 134 (152)
T ss_dssp -------HHHHHHHHH--------HTCCSEEEE-ECHHHHHHHH---HHTTCC-SSCEEEEECTTSEEEEECCCTTHHHH
T ss_pred -------HHHHHHHHH--------hCCCCeEEe-cccchhHHHH---HHhCCC-cCCeEEEECCCCeEEEeeCCHHHHHH
Confidence 111111111 112343322 2223322222 334552 24678899999999999866555555
Q ss_pred HHhcC
Q 020414 310 IVQEL 314 (326)
Q Consensus 310 lv~eL 314 (326)
.+++|
T Consensus 135 ~l~~l 139 (152)
T 2lrn_A 135 TVEKF 139 (152)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 33
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=88.21 E-value=4.4 Score=31.66 Aligned_cols=129 Identities=12% Similarity=0.064 Sum_probs=74.8
Q ss_pred hhhccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCC
Q 020414 146 DETLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGL 224 (326)
Q Consensus 146 Ee~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~ 224 (326)
+..+-.+.+.-.+++.+++.+++ ..-+|...++ =.++...+...+.+.+++ ++-+|-|..+..+.+
T Consensus 8 g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~~~~~--------- 74 (154)
T 3ia1_A 8 GEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREPRDTR--------- 74 (154)
T ss_dssp BEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCTTCCH---------
T ss_pred CCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCCcccH---------
Confidence 34455556666688999999998 4333333333 346667777777777777 788888877421111
Q ss_pred cccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChh--hHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCC
Q 020414 225 APKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPS--EWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGK 302 (326)
Q Consensus 225 ~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~--eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~ 302 (326)
++. +.... .... -+|+..+ +...-+ .+.-|+. .-+.++.+..||+|+.+-.
T Consensus 75 ------------~~~----~~~~~----~~~~---~~~~~~d~~~~~~~~---~~~~~v~-~~P~~~lid~~G~i~~~~~ 127 (154)
T 3ia1_A 75 ------------EVV----LEYMK----TYPR---FIPLLASDRDRPHEV---AARFKVL-GQPWTFVVDREGKVVALFA 127 (154)
T ss_dssp ------------HHH----HHHHT----TCTT---EEECBCCSSCCHHHH---HTTSSBC-SSCEEEEECTTSEEEEEEE
T ss_pred ------------HHH----HHHHH----HcCC---CcccccccccchHHH---HHHhCCC-cccEEEEECCCCCEEEEEc
Confidence 111 11110 0111 2344333 111111 1233442 3567899999999999999
Q ss_pred CCCchHHHHhcC
Q 020414 303 GMPDWQQIVQEL 314 (326)
Q Consensus 303 G~PpW~~lv~eL 314 (326)
|..+.+++.+.|
T Consensus 128 g~~~~~~l~~~l 139 (154)
T 3ia1_A 128 GRAGREALLDAL 139 (154)
T ss_dssp SBCCHHHHHHHH
T ss_pred CCCCHHHHHHHH
Confidence 998888776654
No 34
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=87.72 E-value=5.4 Score=30.69 Aligned_cols=60 Identities=3% Similarity=-0.055 Sum_probs=38.7
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHH---HHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAE---RFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae---~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.-.+|+.+++.+++|..-+|...++ =..+...+..-+ .+.+.+.+.++.||-|..+
T Consensus 9 ~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d 72 (142)
T 3ewl_A 9 DFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPD 72 (142)
T ss_dssp CCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECS
T ss_pred CCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEec
Confidence 34444457899999999985444333332 234544433333 3777888889999999875
No 35
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=87.58 E-value=9.6 Score=32.10 Aligned_cols=62 Identities=8% Similarity=-0.008 Sum_probs=42.0
Q ss_pred cCCeeeeCCCceeehhhhcCcceeEEEecCH-H-HHHHHHHHHHHHHHHHhhc---CcEEEEEEeCC
Q 020414 150 SRLPLRLSTNRIVELVQLRGTVRPVILAGRK-E-TVSLAIQKAERFRTDLLRR---GVLLVPVIWGE 211 (326)
Q Consensus 150 ~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~~-e-~V~~Al~~Ae~~r~~L~~r---gVLVVPVv~~~ 211 (326)
....+.-.+|+.+++.+++|..-+|..-++- . .+...+...+.+.+.+.+. +|-||-|..+.
T Consensus 22 p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 22 GPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp CCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 3444554588999999999865544443332 3 3666677777777777754 89888888753
No 36
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=85.67 E-value=11 Score=29.22 Aligned_cols=63 Identities=6% Similarity=0.009 Sum_probs=45.1
Q ss_pred hccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHH---HHHHHhhcCcEEEEEEeC
Q 020414 148 TLSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAER---FRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 148 ~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~---~r~~L~~rgVLVVPVv~~ 210 (326)
.+-.+.+.-.+|+.++|.+++|..-++...+ .=.++...+...+. +.+.+.+.++.||-|..+
T Consensus 10 ~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d 76 (142)
T 3eur_A 10 KALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPD 76 (142)
T ss_dssp BCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS
T ss_pred ccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcC
Confidence 3445555556889999999999544443333 23567777777777 888888899999998874
No 37
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=83.92 E-value=12 Score=28.39 Aligned_cols=122 Identities=10% Similarity=0.077 Sum_probs=69.6
Q ss_pred CCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcccccccCCCCc
Q 020414 158 TNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAAAALPSIG 236 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~a~ps~~ 236 (326)
+++.+++.++++..-+|...++ =.++...+...+.+.+.+.+. +.++.|..+...... .+
T Consensus 18 ~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~~~~~---------------~~--- 78 (148)
T 2b5x_A 18 NGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRSEDDL---------------DP--- 78 (148)
T ss_dssp SCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCSTTTS---------------SH---
T ss_pred cCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCCcccc---------------CH---
Confidence 6789999999886655554443 355666666667777777776 888888875421110 00
Q ss_pred hhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHHHHhcC
Q 020414 237 EDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQIVQEL 314 (326)
Q Consensus 237 ~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~lv~eL 314 (326)
++. +..... ..-.| |+..+.-.. -.+.-|+ ..-+.++.+..||+|..+..|.++..++.+.|
T Consensus 79 ~~~----~~~~~~----~~~~~---~~~~d~~~~----~~~~~~v-~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 140 (148)
T 2b5x_A 79 GKI----KETAAE----HDITQ---PIFVDSDHA----LTDAFEN-EYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRV 140 (148)
T ss_dssp HHH----HHHHHH----TTCCS---CEEECSSCH----HHHHTCC-CCSSEEEEECTTCBEEEEEESCSTTHHHHHHH
T ss_pred HHH----HHHHHH----cCCCc---ceEECCchh----HHHHhCC-CCCCEEEEECCCCcEEEEecCCCCHHHHHHHH
Confidence 111 111111 11122 222111001 1122355 23567889999999999999988877766543
No 38
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=83.63 E-value=17 Score=29.68 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=44.7
Q ss_pred ccCCeee-eCCCceeehhhhcCcc-eeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 149 LSRLPLR-LSTNRIVELVQLRGTV-RPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 149 L~rL~V~-l~~~r~v~L~qLRg~a-RvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
+-.+.+. -.+|+.+++.+++|.. -+|.... .=.++...+...+.+.+++.+.+|.||.|..+.
T Consensus 24 ~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~ 89 (196)
T 2ywi_A 24 APPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSND 89 (196)
T ss_dssp CCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSC
T ss_pred CCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 3345555 4478999999999975 3333332 234666777777788888988999999998854
No 39
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=83.13 E-value=9.5 Score=28.91 Aligned_cols=131 Identities=11% Similarity=0.088 Sum_probs=76.1
Q ss_pred hhhccCCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCC
Q 020414 146 DETLSRLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGL 224 (326)
Q Consensus 146 Ee~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~ 224 (326)
.+.+-.+.+.-.+++.+++.+ ++..-+|...++ =.++...+...+.+.+.+.+.++-+|.|..+......
T Consensus 12 g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~-------- 82 (145)
T 3erw_A 12 PAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQ-------- 82 (145)
T ss_dssp CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCH--------
T ss_pred CCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCH--------
Confidence 344444455555789999999 776555544433 3567777777788888888789999999885321110
Q ss_pred cccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCC
Q 020414 225 APKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGM 304 (326)
Q Consensus 225 ~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~ 304 (326)
+.+. ..... ..-.| |+..+.-.. + .+.-|+. .-+.++.+..||+|+.+-.|.
T Consensus 83 ------------~~~~----~~~~~----~~~~~---~~~~d~~~~-~---~~~~~v~-~~P~~~lid~~G~i~~~~~g~ 134 (145)
T 3erw_A 83 ------------QVVE----DFIKA----NKLTF---PIVLDSKGE-L---MKEYHII-TIPTSFLLNEKGEIEKTKIGP 134 (145)
T ss_dssp ------------HHHH----HHHHH----TTCCS---CEEECSSSH-H---HHHTTCC-EESEEEEECTTCCEEEEEESC
T ss_pred ------------HHHH----HHHHH----cCCce---eEEEcCchh-H---HHhcCcC-ccCeEEEEcCCCcEEEEEcCC
Confidence 1111 11111 01112 221111111 1 1233442 246789999999999999999
Q ss_pred CchHHHHhc
Q 020414 305 PDWQQIVQE 313 (326)
Q Consensus 305 PpW~~lv~e 313 (326)
.+.+++.+-
T Consensus 135 ~~~~~l~~~ 143 (145)
T 3erw_A 135 MTAEQLKEW 143 (145)
T ss_dssp CCHHHHHHH
T ss_pred cCHHHHHHh
Confidence 888777654
No 40
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=82.54 E-value=14 Score=29.41 Aligned_cols=134 Identities=11% Similarity=0.142 Sum_probs=72.8
Q ss_pred HHhhhhhhccCCeeeeC--CCceeehhhh-cCcceeEEEecCHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCccc
Q 020414 141 AQISRDETLSRLPLRLS--TNRIVELVQL-RGTVRPVILAGRKETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQV 217 (326)
Q Consensus 141 ari~REe~L~rL~V~l~--~~r~v~L~qL-Rg~aRvVIvAG~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~ 217 (326)
..+.-++.+-...+.-. +++.+++.++ +|..-+|...++ .+-. ++...+.-++|.+.++-|+.|..++.. ..
T Consensus 20 ~~~~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~--~C~~-C~~~~~~l~~l~~~~v~vv~v~~~~~~-~~- 94 (168)
T 2b1k_A 20 ESALIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWAT--WCPT-CRAEHQYLNQLSAQGIRVVGMNYKDDR-QK- 94 (168)
T ss_dssp CCTTTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECT--TCHH-HHHHHHHHHHHHHTTCCEEEEEESCCH-HH-
T ss_pred cccccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECC--CCHH-HHHHHHHHHHHHHCCCEEEEEECCCCh-HH-
Confidence 33444555666666655 7889999986 666544444433 3332 333344445566669999998874310 00
Q ss_pred ccccCCCcccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCcee
Q 020414 218 EKKGFGLAPKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRV 297 (326)
Q Consensus 218 ~~kgfG~~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRV 297 (326)
. .+|- +.. ...|...-.+.+. . +. +.-|+. +-+.++.+..||+|
T Consensus 95 -------------~-----~~~~---~~~--------~~~~~~~~~d~~~--~-~~---~~~~v~-~~P~~~lid~~G~i 138 (168)
T 2b1k_A 95 -------------A-----ISWL---KEL--------GNPYALSLFDGDG--M-LG---LDLGVY-GAPETFLIDGNGII 138 (168)
T ss_dssp -------------H-----HHHH---HHH--------CCCCSEEEEETTC--H-HH---HHHTCC-SSSEEEEECTTSBE
T ss_pred -------------H-----HHHH---HHc--------CCCCceeeECcch--H-HH---HHcCcc-ccCEEEEECCCCeE
Confidence 0 1111 110 1122111111110 0 11 122442 24668889999999
Q ss_pred eecCCCCCchHHHHhcCC
Q 020414 298 RRSGKGMPDWQQIVQELP 315 (326)
Q Consensus 298 r~SG~G~PpW~~lv~eLP 315 (326)
+.+-.|..+...+.+.+-
T Consensus 139 ~~~~~g~~~~~~l~~~l~ 156 (168)
T 2b1k_A 139 RYRHAGDLNPRVWEEEIK 156 (168)
T ss_dssp EEEEESCCCHHHHHHTTH
T ss_pred EEEEeCCCCHHHHHHHHH
Confidence 999999988888877653
No 41
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=81.45 E-value=20 Score=29.21 Aligned_cols=135 Identities=10% Similarity=0.085 Sum_probs=78.4
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecCHH--HHHHHHHHHHHHHHHHhh--cCcEEEEEEeCCCCCcccccccCCCcc
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGRKE--TVSLAIQKAERFRTDLLR--RGVLLVPVIWGEGRAPQVEKKGFGLAP 226 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~~e--~V~~Al~~Ae~~r~~L~~--rgVLVVPVv~~~~~~~~~~~kgfG~~~ 226 (326)
...+.-.+|+.+++++|+|..-+|..-.+.= .+...+..-+.+.+++.+ .++-||-|..+..+.++
T Consensus 10 ~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~~d~~~---------- 79 (170)
T 3me7_A 10 DITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLE---------- 79 (170)
T ss_dssp TCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCTTCCHH----------
T ss_pred CeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCCCCCHH----------
Confidence 4444445889999999998765555555543 467777777888888865 56888888875311110
Q ss_pred cccccCCCCchhHHHHhHHHhhhhccccccceEE-EeeChhhHHHHHHHHHhhcCCC--------CCCcEEEEEeeCcee
Q 020414 227 KAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKA-EVVSPSEWERWIRDQQKSEGVT--------PGEDVYIILRLDGRV 297 (326)
Q Consensus 227 ~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A-~Pv~~~eW~~wi~eQ~~~aGv~--------~~~gVyi~LrlDGRV 297 (326)
..+..+. ........|.. .+-+.++-.+..+ .-|+. ...+.++.|..||+|
T Consensus 80 ---------------~~~~~~~-~~~~~~~~w~~l~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~lID~~G~i 139 (170)
T 3me7_A 80 ---------------DIKRFQK-EYGIDGKGWKVVKAKTSEDLFKLLD----AIDFRFMTAGNDFIHPNVVVVLSPELQI 139 (170)
T ss_dssp ---------------HHHHHHH-HTTCCSSSEEEEEESSHHHHHHHHH----HTTCCCEEETTEEECCCEEEEECTTSBE
T ss_pred ---------------HHHHHHH-HcCCCCCCeEEEeCCCHHHHHHHHH----HCCeEEecCCCccccCceEEEECCCCeE
Confidence 1111111 11112234643 3334444333332 22331 123468899999999
Q ss_pred eecCCCC-CchHHHHhcCC
Q 020414 298 RRSGKGM-PDWQQIVQELP 315 (326)
Q Consensus 298 r~SG~G~-PpW~~lv~eLP 315 (326)
+..=.|. |+.+++.+.|.
T Consensus 140 ~~~~~g~~~~~~~i~~~l~ 158 (170)
T 3me7_A 140 KDYIYGVNYNYLEFVNALR 158 (170)
T ss_dssp EEEEESSSCCHHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHH
Confidence 9865664 66777776653
No 42
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=81.09 E-value=21 Score=29.14 Aligned_cols=131 Identities=15% Similarity=0.143 Sum_probs=70.0
Q ss_pred hhhhhccCCeeeeCCC--ceeehhhhcCcceeEEEecCHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCccccccc
Q 020414 144 SRDETLSRLPLRLSTN--RIVELVQLRGTVRPVILAGRKETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKG 221 (326)
Q Consensus 144 ~REe~L~rL~V~l~~~--r~v~L~qLRg~aRvVIvAG~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kg 221 (326)
.-+..+-.+.+.--++ +.+++.+++|..-+|...++ .+.. ++...+.-++|.+.||-||-|..++. +
T Consensus 31 ~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~--~C~~-C~~~~~~l~~l~~~~v~vv~vs~~d~--~------ 99 (176)
T 3kh7_A 31 LIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGT--WCPS-CRVEHPELTRLAEQGVVIYGINYKDD--N------ 99 (176)
T ss_dssp TTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECT--TCHH-HHHHHHHHHHHHHTTCEEEEEEESCC--H------
T ss_pred ccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECC--cCHH-HHHHHHHHHHHHHCCCEEEEEeCCCC--H------
Confidence 3344444555555455 88999999987655544433 3322 22233333445555999999987421 0
Q ss_pred CCCcccccccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecC
Q 020414 222 FGLAPKAAAALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSG 301 (326)
Q Consensus 222 fG~~~~aa~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG 301 (326)
++..+-.+.. .-.|...-.+.+ .-+. +.-|+. .-+.++.+..||+|+.+-
T Consensus 100 ---------------~~~~~~~~~~--------~~~~~~~~~d~~---~~~~---~~~~v~-~~P~~~lid~~G~i~~~~ 149 (176)
T 3kh7_A 100 ---------------AAAIKWLNEL--------HNPYLLSISDAD---GTLG---LDLGVY-GAPETYLIDKQGIIRHKI 149 (176)
T ss_dssp ---------------HHHHHHHHHT--------TCCCSEEEEETT---CHHH---HHHTCC-SSCEEEEECTTCBEEEEE
T ss_pred ---------------HHHHHHHHHc--------CCCCceEEECCc---chHH---HHcCCC-CCCeEEEECCCCeEEEEE
Confidence 1111000110 111211111111 1111 122442 246788999999999999
Q ss_pred CCCCchHHHHhcCC
Q 020414 302 KGMPDWQQIVQELP 315 (326)
Q Consensus 302 ~G~PpW~~lv~eLP 315 (326)
.|..+.+.+.+.|-
T Consensus 150 ~g~~~~~~l~~~l~ 163 (176)
T 3kh7_A 150 VGVVDQKVWREQLA 163 (176)
T ss_dssp ESCCCHHHHHHHTH
T ss_pred cCCCCHHHHHHHHH
Confidence 99988888777654
No 43
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=80.37 E-value=2.1 Score=36.75 Aligned_cols=57 Identities=11% Similarity=0.152 Sum_probs=37.3
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEe-c-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILA-G-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvA-G-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+.+.-.+|+.++|++++|..-++..- + .-..+...+...+.+.+++ .|+-||-|..+
T Consensus 61 f~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D 119 (200)
T 3zrd_A 61 FTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD 119 (200)
T ss_dssp CEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS
T ss_pred eEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC
Confidence 33333368999999999964333332 3 2445666666666666677 78988888764
No 44
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=80.29 E-value=15 Score=27.07 Aligned_cols=128 Identities=12% Similarity=0.168 Sum_probs=67.7
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcccccc
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAAA 230 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~ 230 (326)
+.+.-.+|+.+++.+++|..-+|...++ =.++...+...+.+.+. ...++.+|.+.....+...
T Consensus 5 f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~-~~~~~~~v~i~~~~~~~~~-------------- 69 (138)
T 4evm_A 5 FELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKE-AGDDYVVLTVVSPGHKGEQ-------------- 69 (138)
T ss_dssp CEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHT-CTTTEEEEEEECTTSTTCC--------------
T ss_pred ceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHH-hCCCcEEEEEEcCCCCchh--------------
Confidence 3344447899999999986644444433 23455555555565555 4558888888653211110
Q ss_pred cCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHHH
Q 020414 231 ALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQI 310 (326)
Q Consensus 231 a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~l 310 (326)
. .+++ +.... +..+.-.|+..+.-.. + .+.-|+ ..-+.++.+..||+|+.+-.|..+=+++
T Consensus 70 --~--~~~~----~~~~~------~~~~~~~~~~~d~~~~-~---~~~~~v-~~~P~~~lid~~G~i~~~~~g~~~~~~l 130 (138)
T 4evm_A 70 --S--EADF----KNWYK------GLDYKNLPVLVDPSGK-L---LETYGV-RSYPTQAFIDKEGKLVKTHPGFMEKDAI 130 (138)
T ss_dssp --C--HHHH----HHHHT------TCCCTTCCEEECTTCH-H---HHHTTC-CSSSEEEEECTTCCEEEEEESCCCHHHH
T ss_pred --h--HHHH----HHHHh------hcCCCCeeEEECcchH-H---HHHcCc-ccCCeEEEECCCCcEEEeecCCCcHHHH
Confidence 0 0111 11110 1111111222111111 1 123344 2346789999999999999998776665
Q ss_pred Hhc
Q 020414 311 VQE 313 (326)
Q Consensus 311 v~e 313 (326)
.+.
T Consensus 131 ~~~ 133 (138)
T 4evm_A 131 LQT 133 (138)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 45
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=76.82 E-value=21 Score=28.92 Aligned_cols=114 Identities=12% Similarity=0.143 Sum_probs=71.6
Q ss_pred eeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhh-cCcEEEEEEeCCCCCcccccccCCCcccccc
Q 020414 153 PLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLR-RGVLLVPVIWGEGRAPQVEKKGFGLAPKAAA 230 (326)
Q Consensus 153 ~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~-rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~ 230 (326)
.+.-.++ .++|.+++|..-+|...++ =..+...+...+.+.+++.+ .++.||-|.++...
T Consensus 33 ~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~----------------- 94 (165)
T 3s9f_A 33 KLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEE----------------- 94 (165)
T ss_dssp CEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSH-----------------
T ss_pred eeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCH-----------------
Confidence 4555577 9999999986544433333 34566667777777888876 68999999885210
Q ss_pred cCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeC-ceeeecCCCC
Q 020414 231 ALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLD-GRVRRSGKGM 304 (326)
Q Consensus 231 a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlD-GRVr~SG~G~ 304 (326)
+++. ... .+..|...|+..+....=+.+ .-|+. .-+.++.+..| |+|..+..+.
T Consensus 95 ------~~~~----~~~------~~~~~~~~~~~~~~~~~~l~~---~~~v~-~~Pt~~lid~~~G~iv~~~~~~ 149 (165)
T 3s9f_A 95 ------DDFN----AYY------AKMPWLSIPFANRNIVEALTK---KYSVE-SIPTLIGLNADTGDTVTTRARH 149 (165)
T ss_dssp ------HHHH----HHH------TTCSSEECCTTCHHHHHHHHH---HTTCC-SSSEEEEEETTTCCEEESCHHH
T ss_pred ------HHHH----HHH------HhCCCcccccCchhHHHHHHH---HcCCC-CCCEEEEEeCCCCEEEecccHH
Confidence 1111 111 235688888876554333333 33452 34678899998 9999887653
No 46
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=76.54 E-value=18 Score=30.92 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=47.2
Q ss_pred hhhccCCeeeeCCCceeehhhhcCcc-eeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 146 DETLSRLPLRLSTNRIVELVQLRGTV-RPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 146 Ee~L~rL~V~l~~~r~v~L~qLRg~a-RvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
.+.+-.+.+.-.+|+.+++.+++|.. -+|.... .=..+...+...+.+.+++.+.||.||-|..+.
T Consensus 35 G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 102 (218)
T 3u5r_E 35 GTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSND 102 (218)
T ss_dssp TCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSC
T ss_pred CCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 44445555555688999999999984 3333322 223566677788888899999999999998853
No 47
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=76.13 E-value=17 Score=34.46 Aligned_cols=123 Identities=15% Similarity=0.094 Sum_probs=70.1
Q ss_pred CCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcccccccCCCC
Q 020414 157 STNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAAAALPSI 235 (326)
Q Consensus 157 ~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~a~ps~ 235 (326)
.+++.+++.+++|..-+|.... .=..+...+..-+.+.+++.+.++.||-|..+.....+ .+
T Consensus 70 ~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d---------------~~-- 132 (352)
T 2hyx_A 70 PGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEK---------------VP-- 132 (352)
T ss_dssp GGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGG---------------CH--
T ss_pred CCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccC---------------CH--
Confidence 3678999999998654444333 23456666777777888888889999999874310000 00
Q ss_pred chhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHHHHhc
Q 020414 236 GEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQIVQE 313 (326)
Q Consensus 236 ~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~lv~e 313 (326)
++.. ..... -...| |+..|.=. +-.+.-++. .-+.++.+.+||+|+.+-.|..++.++.+.
T Consensus 133 -~~~~----~~~~~----~~l~f---pv~~D~~~----~l~~~ygV~-~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~ 193 (352)
T 2hyx_A 133 -GNVA----KGAAN----LGISY---PIALDNNY----ATWTNYRNR-YWPAEYLIDATGTVRHIKFGEGDYNVTETL 193 (352)
T ss_dssp -HHHH----HHHHH----HTCCS---CEEECTTS----HHHHHTTCC-EESEEEEECTTSBEEEEEESBCCHHHHHHH
T ss_pred -HHHH----HHHHH----cCCCc---cEEeCCcH----HHHHHcCCC-ccCEEEEEeCCCeEEEEEcCCCCHHHHHHH
Confidence 1111 11111 01112 22221100 011222442 235678899999999999998888776543
No 48
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=75.93 E-value=3.1 Score=32.99 Aligned_cols=64 Identities=13% Similarity=0.122 Sum_probs=43.8
Q ss_pred hhccCCeeeeCCCceeehhhhcCc-ceeEEEe-c-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 147 ETLSRLPLRLSTNRIVELVQLRGT-VRPVILA-G-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 147 e~L~rL~V~l~~~r~v~L~qLRg~-aRvVIvA-G-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+.+-.+.+.-.+|+.+++.+++|. .-++... + .-..+...+..-+.+.+++.+.|+-||-|..+
T Consensus 13 ~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d 79 (160)
T 1xvw_A 13 ATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG 79 (160)
T ss_dssp SBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC
T ss_pred CCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC
Confidence 334444554457899999999997 4344342 2 23466667777777777788789999988774
No 49
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=75.72 E-value=27 Score=27.49 Aligned_cols=63 Identities=10% Similarity=0.117 Sum_probs=44.7
Q ss_pred hhhccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 146 DETLSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 146 Ee~L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+-.+.+.-.+++.+++.+++|..-+|...+ .=.++...+...+.+.+.+. +|.||-|..+
T Consensus 14 g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d 77 (165)
T 3ha9_A 14 LEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFW 77 (165)
T ss_dssp HHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECC
T ss_pred cCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEec
Confidence 455556666667899999999998654444433 23457777777777777776 8999988875
No 50
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=74.97 E-value=5.8 Score=34.26 Aligned_cols=70 Identities=7% Similarity=0.014 Sum_probs=48.9
Q ss_pred HHhhhhhhccCCeeee--C-CCceeehhhhcCcceeEEEe-cC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 141 AQISRDETLSRLPLRL--S-TNRIVELVQLRGTVRPVILA-GR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 141 ari~REe~L~rL~V~l--~-~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
..+.-...+-...+.- . +++.++|++++|..-+|..- ++ -..+...+...+.+.+++.++||-||-|..+
T Consensus 38 ~~l~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D 112 (222)
T 3ztl_A 38 MVLLPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD 112 (222)
T ss_dssp --CCSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred ccccCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 4455566666666652 2 45999999999864333222 22 5667778888888999999999999998874
No 51
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=74.63 E-value=17 Score=29.33 Aligned_cols=55 Identities=7% Similarity=0.053 Sum_probs=33.2
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEe-c-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILA-G-RKETVSLAIQKAERFRTDLLRRGVLLVPVIW 209 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvA-G-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~ 209 (326)
..+.-.+|+.++|++|||..-++..- + .-..+...+..-+.+.++ .|+.||-|..
T Consensus 29 f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~ 85 (166)
T 3p7x_A 29 FTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISA 85 (166)
T ss_dssp CEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEES
T ss_pred eEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEEC
Confidence 33333468999999999964333322 2 244555555444444433 7888888875
No 52
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=72.51 E-value=12 Score=29.62 Aligned_cols=59 Identities=15% Similarity=0.086 Sum_probs=40.2
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEecC-HH-HHHHHHHHHHHHHHHHhhc---CcEEEEEEeCC
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILAGR-KE-TVSLAIQKAERFRTDLLRR---GVLLVPVIWGE 211 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e-~V~~Al~~Ae~~r~~L~~r---gVLVVPVv~~~ 211 (326)
+.+.-.+| .+++.+++|..-+|....+ =. .+...+..-+.+.+++.+. +|.||-|..+.
T Consensus 19 f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~ 82 (172)
T 2k6v_A 19 FALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDP 82 (172)
T ss_dssp CEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCT
T ss_pred eEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECC
Confidence 33333467 9999999987554444333 23 3677777777777777776 79999888753
No 53
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=71.77 E-value=27 Score=29.92 Aligned_cols=60 Identities=18% Similarity=0.170 Sum_probs=40.2
Q ss_pred CCeeeeCC-CceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLST-NRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~-~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.--+ |+.++|+++||..-+|..-++ =..+...+..-+.+.+++.+.|+.||-|..+
T Consensus 28 ~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 28 AFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp GCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred ceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 33443336 899999999996433332221 2235555666777888888899999998875
No 54
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=71.61 E-value=5.4 Score=31.40 Aligned_cols=127 Identities=13% Similarity=0.077 Sum_probs=73.3
Q ss_pred CCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCcccccccCCCC
Q 020414 157 STNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAAAALPSI 235 (326)
Q Consensus 157 ~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~a~ps~ 235 (326)
.+++.+++.+++|..-+|....+ =.++...+...+.+.+++...+|-||.|.++.....+ .+
T Consensus 26 ~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~---------------~~-- 88 (164)
T 2h30_A 26 ADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEK---------------KD-- 88 (164)
T ss_dssp TTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCC---------------CT--
T ss_pred CCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCcccc---------------CH--
Confidence 36789999999987655554433 2446666666666777777889999999885321110 00
Q ss_pred chhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHHHHhcCC
Q 020414 236 GEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQIVQELP 315 (326)
Q Consensus 236 ~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~lv~eLP 315 (326)
+++. ... .+..|...|+..++-.. -.+.-|+. .-+.++.+..||+|+.+-.|..++.++.+.+-
T Consensus 89 -~~~~----~~~------~~~~~~~~~~~~d~~~~----~~~~~~v~-~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~ 152 (164)
T 2h30_A 89 -GEFQ----KWY------AGLNYPKLPVVTDNGGT----IAQNLNIS-VYPSWALIGKDGDVQRIVKGSINEAQALALIR 152 (164)
T ss_dssp -THHH----HHH------TTSCCTTSCEEECTTCH----HHHHTTCC-SSSEEEEECTTSCEEEEEESCCCHHHHHHHHH
T ss_pred -HHHH----HHH------HhCCCCcceEEEcCchH----HHHHcCCC-ccceEEEECCCCcEEEEEcCCCCHHHHHHHHH
Confidence 1221 111 01122212333332111 11223442 24678889999999999889888887766554
Q ss_pred C
Q 020414 316 P 316 (326)
Q Consensus 316 ~ 316 (326)
.
T Consensus 153 ~ 153 (164)
T 2h30_A 153 N 153 (164)
T ss_dssp C
T ss_pred H
Confidence 3
No 55
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=71.30 E-value=21 Score=28.68 Aligned_cols=56 Identities=13% Similarity=0.098 Sum_probs=36.5
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEec--C-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILAG--R-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvAG--~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
..+.-.+|+.+++++++|.. +||.-. + -..+...+..-+.+.+++ .++-||-|..+
T Consensus 25 f~l~~~~G~~v~l~~~~gk~-vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d 83 (163)
T 1psq_A 25 FSLTTTDLSKKSLADFDGKK-KVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD 83 (163)
T ss_dssp CEEECTTSCEEEGGGGTTSE-EEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS
T ss_pred EEEEcCCCcEeeHHHhCCCE-EEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC
Confidence 33333478999999999964 333322 2 345666666666666666 78999888764
No 56
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=70.83 E-value=37 Score=26.84 Aligned_cols=58 Identities=12% Similarity=0.044 Sum_probs=40.8
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEe---c-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILA---G-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvA---G-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
..+.-.+|+.+++.+++|..++||+. + .-..+...+..-+.+.+++.++| -||-|..+
T Consensus 16 f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d 77 (159)
T 2a4v_A 16 LSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD 77 (159)
T ss_dssp CEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC
T ss_pred eEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC
Confidence 33433478999999999875433332 2 23577777888888888999898 77777653
No 57
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=70.59 E-value=26 Score=27.70 Aligned_cols=62 Identities=11% Similarity=0.085 Sum_probs=41.9
Q ss_pred cCCeeeeCCCceeehhhhcCcceeEEEecCHH--HHHHHHHHHHHHHHHHhhcC--cEEEEEEeCC
Q 020414 150 SRLPLRLSTNRIVELVQLRGTVRPVILAGRKE--TVSLAIQKAERFRTDLLRRG--VLLVPVIWGE 211 (326)
Q Consensus 150 ~rL~V~l~~~r~v~L~qLRg~aRvVIvAG~~e--~V~~Al~~Ae~~r~~L~~rg--VLVVPVv~~~ 211 (326)
-.+.+.-.+|+.+++.+++|..-+|..-.+.= .+...+.....+.+.+.+.+ |-||-|..+.
T Consensus 14 p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 14 EPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp CCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 34444444789999999999765444443321 45556666667777787776 9999998853
No 58
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=65.79 E-value=25 Score=27.80 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=43.8
Q ss_pred eeeCCCceeehhhhcCcceeEEEe-cC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 154 LRLSTNRIVELVQLRGTVRPVILA-GR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 154 V~l~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+.-.+|+.+++.+++|..-++..- ++ -..+...+...+.+.+++.++|+-||-|..+
T Consensus 20 l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 78 (163)
T 3gkn_A 20 LSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD 78 (163)
T ss_dssp EECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444578999999999984333332 22 5678888888899999999999999999884
No 59
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=65.23 E-value=52 Score=26.37 Aligned_cols=51 Identities=10% Similarity=0.049 Sum_probs=33.1
Q ss_pred CCCceeehhhhcCcceeEEEec---CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 157 STNRIVELVQLRGTVRPVILAG---RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 157 ~~~r~v~L~qLRg~aRvVIvAG---~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+|+.++|+++||.. +||.-. .-..+...+..-+.+.+++ .|+-||-|..+
T Consensus 31 ~~G~~v~l~~~~gk~-vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d 84 (165)
T 1q98_A 31 NDLADVALNDFASKR-KVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD 84 (165)
T ss_dssp TTSCEEEGGGGTTSE-EEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS
T ss_pred CCCCEEehHHhCCCe-EEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC
Confidence 368999999999963 333322 2334445555555566666 78888888764
No 60
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=65.22 E-value=8.7 Score=31.78 Aligned_cols=59 Identities=14% Similarity=0.007 Sum_probs=44.7
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC---HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR---KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~---~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.-.+|+.++|++|||. -+||.-.+ -..+...+...+.+.+++.++|+-||-|..+
T Consensus 33 ~f~l~~~~G~~v~l~d~~Gk-~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D 94 (179)
T 3ixr_A 33 NHPLMLSGSTCKTLSDYTNQ-WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD 94 (179)
T ss_dssp HCCEEEGGGEEECGGGGTTS-EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC
T ss_pred CeeEECCCCCEEeHHHHCCC-CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 34444447899999999997 34444432 4577888888889999999999999988764
No 61
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=64.80 E-value=36 Score=27.37 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=36.6
Q ss_pred eeeeCCCceeehhhhcCcceeEEEe-c-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 153 PLRLSTNRIVELVQLRGTVRPVILA-G-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 153 ~V~l~~~r~v~L~qLRg~aRvVIvA-G-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.-.+++.+++.+++|..-++..- + .-..+...+..-+.+.+++ .+|-||-|..+
T Consensus 31 ~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d 88 (171)
T 2yzh_A 31 VVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD 88 (171)
T ss_dssp EEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS
T ss_pred EEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC
Confidence 3333378999999999864333332 2 2345666666666666666 78988888774
No 62
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=63.40 E-value=48 Score=25.38 Aligned_cols=113 Identities=11% Similarity=0.114 Sum_probs=67.9
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhh-cCcEEEEEEeCCCCCcccccccCCCccccc
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLR-RGVLLVPVIWGEGRAPQVEKKGFGLAPKAA 229 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~-rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa 229 (326)
..+.-.+|+.+++.+++|..-+|....+ =..+...+...+.+.+++.+ .++.||-|..+.. .
T Consensus 11 f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~--~-------------- 74 (144)
T 1i5g_A 11 TNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDES--A-------------- 74 (144)
T ss_dssp SEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSS--H--------------
T ss_pred eEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCC--H--------------
Confidence 4444457899999999986544444433 34566666666777777774 6899998887521 0
Q ss_pred ccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEe-eCceeeecC
Q 020414 230 AALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILR-LDGRVRRSG 301 (326)
Q Consensus 230 ~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~Lr-lDGRVr~SG 301 (326)
+++ +... .+..|...|+...+...=+.+ .-|+. .-+.++.+. .||+|+.+.
T Consensus 75 -------~~~----~~~~------~~~~~~~~~~~~~d~~~~~~~---~~~v~-~~P~~~lid~~~G~i~~~~ 126 (144)
T 1i5g_A 75 -------EDF----KDYY------AKMPWLALPFEDRKGMEFLTT---GFDVK-SIPTLVGVEADSGNIITTQ 126 (144)
T ss_dssp -------HHH----HHHH------TTCSSEECCTTCHHHHHHHHH---HTTCC-SSSEEEEEETTTCCEEESC
T ss_pred -------HHH----HHHH------HhCCccccccCchHHHHHHHH---HcCCC-CCCEEEEEECCCCcEEecc
Confidence 111 1111 234576777764332222222 33552 245788899 999998875
No 63
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=61.04 E-value=48 Score=24.61 Aligned_cols=120 Identities=9% Similarity=0.029 Sum_probs=68.1
Q ss_pred eeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCccccccc
Q 020414 153 PLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAAAA 231 (326)
Q Consensus 153 ~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa~a 231 (326)
.+.-.+++.+++.++++..-+|....+ =.++...+...+.+.+++. ++.++-|..++. +
T Consensus 8 ~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~--~---------------- 67 (136)
T 1lu4_A 8 TATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATRAD--V---------------- 67 (136)
T ss_dssp EEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSC--H----------------
T ss_pred EeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcCCC--H----------------
Confidence 333347899999999986655554433 3566666666666666665 899998887431 0
Q ss_pred CCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCC---CCCchH
Q 020414 232 LPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGK---GMPDWQ 308 (326)
Q Consensus 232 ~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~---G~PpW~ 308 (326)
++..+-.+.. ...|. +..+.=.. + .+.-|+ ..-+.++.+..||+|+ +-. |.++.+
T Consensus 68 -----~~~~~~~~~~--------~~~~~---~~~d~~~~-~---~~~~~i-~~~P~~~lid~~G~i~-~~~~~~g~~~~~ 125 (136)
T 1lu4_A 68 -----GAMQSFVSKY--------NLNFT---NLNDADGV-I---WARYNV-PWQPAFVFYRADGTST-FVNNPTAAMSQD 125 (136)
T ss_dssp -----HHHHHHHHHH--------TCCSE---EEECTTSH-H---HHHTTC-CSSSEEEEECTTSCEE-EECCSSSCCCHH
T ss_pred -----HHHHHHHHHc--------CCCce---EEECCchh-H---HHhcCC-CCCCEEEEECCCCcEE-EEEcCCCccCHH
Confidence 1111111111 11222 21111000 1 122344 2346788999999999 888 988887
Q ss_pred HHHhcC
Q 020414 309 QIVQEL 314 (326)
Q Consensus 309 ~lv~eL 314 (326)
++.+.|
T Consensus 126 ~l~~~l 131 (136)
T 1lu4_A 126 ELSGRV 131 (136)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776544
No 64
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=60.46 E-value=9.4 Score=31.29 Aligned_cols=56 Identities=11% Similarity=0.088 Sum_probs=35.2
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEe-cC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILA-GR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
..+.-.+++.+++.+++|..-+|... .. -..+...+..-+.+.++ .+|-||-|..+
T Consensus 27 f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D 84 (175)
T 1xvq_A 27 FTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD 84 (175)
T ss_dssp CEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS
T ss_pred eEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC
Confidence 33433478999999999865444433 22 34555555555555554 78888888874
No 65
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=51.44 E-value=94 Score=25.01 Aligned_cols=62 Identities=15% Similarity=0.064 Sum_probs=41.4
Q ss_pred ccCCeeeeCCCceeehhhhcCcceeEEEec-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 149 LSRLPLRLSTNRIVELVQLRGTVRPVILAG-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 149 L~rL~V~l~~~r~v~L~qLRg~aRvVIvAG-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
+-.+.+.-.+|+.+++.+++|..-+|.... .=.++...+...+.+.+++.+. +.||-|..+.
T Consensus 13 ~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~ 75 (188)
T 2cvb_A 13 LIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINAND 75 (188)
T ss_dssp CCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCC
T ss_pred CCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCc
Confidence 334444444789999999999544444333 2345666666777778888877 8888887743
No 66
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=50.79 E-value=72 Score=23.46 Aligned_cols=123 Identities=11% Similarity=0.027 Sum_probs=68.4
Q ss_pred CCeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCCCcccccccCCCccccc
Q 020414 151 RLPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWGEGRAPQVEKKGFGLAPKAA 229 (326)
Q Consensus 151 rL~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa 229 (326)
...+.--+++.+++.++++..-+|...++ =.++...+...+.+.+.+. ++-++-|..++. +
T Consensus 7 ~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~~--~-------------- 68 (136)
T 1zzo_A 7 QFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGLDQ--V-------------- 68 (136)
T ss_dssp CCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSSC--H--------------
T ss_pred CcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCCCC--H--------------
Confidence 34444447899999999886555544433 3455556666666666665 899988887421 0
Q ss_pred ccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCCCCchHH
Q 020414 230 AALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKGMPDWQQ 309 (326)
Q Consensus 230 ~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G~PpW~~ 309 (326)
++.. ...... .. ..| |+..+.... -.+.-|+ .+-+.++.+..||+|. +-.|..+..+
T Consensus 69 -------~~~~----~~~~~~-~~--~~~---~~~~d~~~~----~~~~~~i-~~~P~~~~id~~g~i~-~~~g~~~~~~ 125 (136)
T 1zzo_A 69 -------PAMQ----EFVNKY-PV--KTF---TQLADTDGS----VWANFGV-TQQPAYAFVDPHGNVD-VVRGRMSQDE 125 (136)
T ss_dssp -------HHHH----HHHHHT-TC--TTS---EEEECTTCH----HHHHTTC-CSSSEEEEECTTCCEE-EEESCCCHHH
T ss_pred -------HHHH----HHHHHc-CC--Cce---EEEEcCCcH----HHHHcCC-CCCceEEEECCCCCEE-EEecCCCHHH
Confidence 1111 111000 00 022 222121111 1122344 2346788999999999 8888888777
Q ss_pred HHhcC
Q 020414 310 IVQEL 314 (326)
Q Consensus 310 lv~eL 314 (326)
+.+.|
T Consensus 126 l~~~l 130 (136)
T 1zzo_A 126 LTRRV 130 (136)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66544
No 67
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=46.10 E-value=97 Score=23.64 Aligned_cols=30 Identities=10% Similarity=0.003 Sum_probs=25.3
Q ss_pred CcEEEEEeeCceeeecCCCCCchHHHHhcC
Q 020414 285 EDVYIILRLDGRVRRSGKGMPDWQQIVQEL 314 (326)
Q Consensus 285 ~gVyi~LrlDGRVr~SG~G~PpW~~lv~eL 314 (326)
-+.++.+..||+|+.+-.|..+...+.+.|
T Consensus 118 ~P~~~~id~~G~i~~~~~g~~~~~~l~~~l 147 (156)
T 1kng_A 118 VPETFVVGREGTIVYKLVGPITPDNLRSVL 147 (156)
T ss_dssp SCEEEEECTTSBEEEEEESCCCHHHHHHTH
T ss_pred cCeEEEEcCCCCEEEEEeCCCCHHHHHHHH
Confidence 456888999999999999999988877654
No 68
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=36.21 E-value=92 Score=25.64 Aligned_cols=53 Identities=11% Similarity=0.036 Sum_probs=38.4
Q ss_pred CC--ceeehhhhcCcceeEEE-ecC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TN--RIVELVQLRGTVRPVIL-AGR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~--r~v~L~qLRg~aRvVIv-AG~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+| +.++|++|||..-++.. +++ -..+..-+..-+.+.+++.+.||-||-|..+
T Consensus 17 ~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d 73 (186)
T 1n8j_A 17 NGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD 73 (186)
T ss_dssp TTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred CCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 46 89999999985322222 222 2367777778888888899999999988774
No 69
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=34.99 E-value=86 Score=27.45 Aligned_cols=52 Identities=12% Similarity=-0.008 Sum_probs=39.4
Q ss_pred CCceeehhhhcCcceeEEEecC---HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVILAGR---KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~---~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+++.++|++++|.. +||.-.+ -..+...+.....+.+++.++||-||-|..+
T Consensus 66 ~G~~vsLsd~~Gk~-vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D 120 (240)
T 3qpm_A 66 EFKELKLSDYRGKY-LVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD 120 (240)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred CCcEEEHHHhCCCE-EEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 35799999999963 3333333 4467777888888889999999999998874
No 70
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=34.94 E-value=86 Score=27.11 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=45.7
Q ss_pred HHHhhhhhhccCCeeeeC--CC--ceeehhhh-cCcceeEEEecCHH---HHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 140 LAQISRDETLSRLPLRLS--TN--RIVELVQL-RGTVRPVILAGRKE---TVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 140 lari~REe~L~rL~V~l~--~~--r~v~L~qL-Rg~aRvVIvAG~~e---~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
|..+.-.+.+-...+.-- +| +.++|+++ +|.. +||.-.++. .+...+..-+.+.+++.+.||-||-|..+
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~-vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D 99 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKY-CCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD 99 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCE-EEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCe-EEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 444444555555555544 67 89999999 9864 444433232 45666777777888888899999988874
No 71
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=34.37 E-value=1.5e+02 Score=22.55 Aligned_cols=113 Identities=17% Similarity=0.140 Sum_probs=66.7
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEecC-HHHHHHHHHHHHHHHHHHhh-cCcEEEEEEeCCCCCcccccccCCCccccc
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILAGR-KETVSLAIQKAERFRTDLLR-RGVLLVPVIWGEGRAPQVEKKGFGLAPKAA 229 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvAG~-~e~V~~Al~~Ae~~r~~L~~-rgVLVVPVv~~~~~~~~~~~kgfG~~~~aa 229 (326)
+.+.-.+| .+++.+++|..-+|....+ =.++...+..-+.+.+++.+ .++.||-|..+.. .
T Consensus 12 f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~--~-------------- 74 (146)
T 1o8x_A 12 EKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEE--E-------------- 74 (146)
T ss_dssp CEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCS--H--------------
T ss_pred eEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCC--H--------------
Confidence 45554578 9999999987544444443 24566666666677777773 6888888877421 0
Q ss_pred ccCCCCchhHHHHhHHHhhhhccccccceEEEeeChhhHHHHHHHHHhhcCCCCCCcEEEEEe-eCceeeecCC
Q 020414 230 AALPSIGEDFEKRAQSITAKSKLKSEIRFKAEVVSPSEWERWIRDQQKSEGVTPGEDVYIILR-LDGRVRRSGK 302 (326)
Q Consensus 230 ~a~ps~~~~~e~~~~~~~a~~~~~~~~rw~A~Pv~~~eW~~wi~eQ~~~aGv~~~~gVyi~Lr-lDGRVr~SG~ 302 (326)
+++ +... .+..|...|+...+...=+. +.-|+. .-+.++.+. .||+|..+..
T Consensus 75 -------~~~----~~~~------~~~~~~~~~~~~~d~~~~~~---~~~~v~-~~Pt~~lid~~~G~i~~~~~ 127 (146)
T 1o8x_A 75 -------DGF----AGYF------AKMPWLAVPFAQSEAVQKLS---KHFNVE-SIPTLIGVDADSGDVVTTRA 127 (146)
T ss_dssp -------HHH----HHHH------TTCSSEECCGGGHHHHHHHH---HHTTCC-SSSEEEEEETTTCCEEESCH
T ss_pred -------HHH----HHHH------HHCCceeeccchhhHHHHHH---HHhCCC-CCCEEEEEECCCCeEEEecc
Confidence 111 1111 23456667766423222222 233552 245788889 9999987643
No 72
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=32.25 E-value=1.4e+02 Score=24.46 Aligned_cols=53 Identities=19% Similarity=0.258 Sum_probs=38.3
Q ss_pred CCCceeehhhh-cCcceeEEEe--cC-HHHHHH-HHHHHHHHHHHHhhcCc-EEEEEEeC
Q 020414 157 STNRIVELVQL-RGTVRPVILA--GR-KETVSL-AIQKAERFRTDLLRRGV-LLVPVIWG 210 (326)
Q Consensus 157 ~~~r~v~L~qL-Rg~aRvVIvA--G~-~e~V~~-Al~~Ae~~r~~L~~rgV-LVVPVv~~ 210 (326)
.+++.++|+++ +|.. +||.- ++ -..+.. -+..-+.+.+++.+.|| -||-|..+
T Consensus 18 ~~G~~v~L~d~~~Gk~-vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 76 (167)
T 2wfc_A 18 TPNDKVNMAELFAGKK-GVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN 76 (167)
T ss_dssp STTCEEEHHHHTTTSE-EEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS
T ss_pred CCCcEEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 36799999999 8854 44432 33 345666 56677777888999999 99999874
No 73
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=32.12 E-value=1.1e+02 Score=25.05 Aligned_cols=52 Identities=15% Similarity=0.116 Sum_probs=39.1
Q ss_pred CC--ceeehhhhcCcceeEEEecC---HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TN--RIVELVQLRGTVRPVILAGR---KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~--r~v~L~qLRg~aRvVIvAG~---~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
++ +.++|.+++|.. +||.-.+ =..+...+...+.+.+++.++||-||-|..+
T Consensus 21 ~g~~~~v~l~~~~gk~-vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d 77 (197)
T 1qmv_A 21 DGAFKEVKLSDYKGKY-VVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD 77 (197)
T ss_dssp TTEEEEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCCccEEEHHHHCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 45 899999999854 4443332 3466777777788888899999999999885
No 74
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=31.53 E-value=1e+02 Score=26.39 Aligned_cols=56 Identities=9% Similarity=0.075 Sum_probs=38.5
Q ss_pred CCeeeeCC-CceeehhhhcCcceeEEE----ecCHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLST-NRIVELVQLRGTVRPVIL----AGRKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~-~r~v~L~qLRg~aRvVIv----AG~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.-.+ |+.++|++|||..-+|.. +|+ + .-+..-+.+.+++.+.|+.||-|..+
T Consensus 19 dF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~---c-~e~p~L~~l~~~~~~~g~~vlgvs~d 79 (207)
T 2r37_A 19 EYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGL---T-GQYIELNALQEELAPFGLVILGFPCN 79 (207)
T ss_dssp GCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTT---T-THHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCC---h-HHHHHHHHHHHHhccCCEEEEEEECc
Confidence 34444446 899999999996433322 333 3 23556677888888999999999864
No 75
>2rrl_A FLIK, flagellar HOOK-length control protein; FLHB, bacterial flagella motor, P transport; NMR {Salmonella typhimurium}
Probab=31.09 E-value=1.1e+02 Score=26.85 Aligned_cols=56 Identities=20% Similarity=0.272 Sum_probs=37.9
Q ss_pred hhccCCeeeeCCCceeehhhhcC-cceeEEEecCHHHHHHHHHH-HHHHHHHHhhcCcEEEEEEeCCC
Q 020414 147 ETLSRLPLRLSTNRIVELVQLRG-TVRPVILAGRKETVSLAIQK-AERFRTDLLRRGVLLVPVIWGEG 212 (326)
Q Consensus 147 e~L~rL~V~l~~~r~v~L~qLRg-~aRvVIvAG~~e~V~~Al~~-Ae~~r~~L~~rgVLVVPVv~~~~ 212 (326)
+.||+|.|++. +.+ ...+.+.+ .-..|.++|+. ...+|+.|.+.|+-+.=+....+
T Consensus 96 peLG~l~V~l~---------~~~~q~~v~f~a-~~~~vReaLe~~lp~LRe~La~qGi~L~~v~Vs~~ 153 (169)
T 2rrl_A 96 EELGQVHISLK---------LDDNQAQLQMVS-PHSHVRAALEAALPMLRTQLAESGIQLGQSSISSE 153 (169)
T ss_dssp GGGCCEEEEEE---------EETTEEEEEEEC-CSSHHHHHHHHTHHHHHHHHHTTTCEEEEEEEESS
T ss_pred cccCcEEEEEE---------EECCEEEEEEEc-CCHHHHHHHHHHHHHHHHHHHHcCCCeeeEEEecC
Confidence 55666666655 222 34455544 45578888884 56789999999999998877544
No 76
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=30.44 E-value=1.1e+02 Score=26.51 Aligned_cols=52 Identities=10% Similarity=0.190 Sum_probs=41.0
Q ss_pred CCceeehhhhcCcceeEEEecCHH---HHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVILAGRKE---TVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~~e---~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+| .+++.+++|..-+|++-=++. .+..-+.....+.+++.++||-||-|..+
T Consensus 20 ~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D 74 (220)
T 1xcc_A 20 DG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN 74 (220)
T ss_dssp SS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 45 899999999866777654443 55667778888889999999999999875
No 77
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=30.11 E-value=86 Score=27.93 Aligned_cols=52 Identities=12% Similarity=-0.031 Sum_probs=38.3
Q ss_pred CceeehhhhcCcceeEEEecCH---HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCC
Q 020414 159 NRIVELVQLRGTVRPVILAGRK---ETVSLAIQKAERFRTDLLRRGVLLVPVIWGE 211 (326)
Q Consensus 159 ~r~v~L~qLRg~aRvVIvAG~~---e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~~ 211 (326)
++.++|+++||.. +|+.-=|+ -.+..-+..-+...+++.++|+.|+-|..+.
T Consensus 42 ~~~vsLsd~~GK~-vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds 96 (216)
T 3sbc_A 42 FDEVSLDKYKGKY-VVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDS 96 (216)
T ss_dssp EEEECGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CcEEehHHhCCCe-EEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCc
Confidence 4789999999954 44433333 3456666677777889999999999998853
No 78
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=29.14 E-value=1e+02 Score=26.22 Aligned_cols=52 Identities=12% Similarity=-0.020 Sum_probs=38.6
Q ss_pred CCceeehhhhcCcceeEEEecCH---HHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVILAGRK---ETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~~---e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+++.++|+++||.. +||.-.++ ..+...+...+.+.+++.+.||-||-|..+
T Consensus 37 ~g~~v~l~d~~Gk~-vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D 91 (211)
T 2pn8_A 37 EFKELKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 91 (211)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCcEEEHHHhCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 45899999999964 44443322 256667777788888899999999999874
No 79
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=29.10 E-value=42 Score=27.50 Aligned_cols=36 Identities=28% Similarity=0.506 Sum_probs=23.9
Q ss_pred HHHHHHHHHhh--cCCCCCCcEEEEEeeCceeeecCCCCC
Q 020414 268 WERWIRDQQKS--EGVTPGEDVYIILRLDGRVRRSGKGMP 305 (326)
Q Consensus 268 W~~wi~eQ~~~--aGv~~~~gVyi~LrlDGRVr~SG~G~P 305 (326)
|+.|+|+++-. .|-.- .... ++..||.||.+-.|.|
T Consensus 2 Wq~YVd~~L~~~~~g~~~-~~aA-Iig~dGsvWA~s~gf~ 39 (130)
T 3nul_A 2 WQSYVDDHLMCDVEGNHL-TAAA-ILGQDGSVWAQSAKFP 39 (130)
T ss_dssp HHHHHHHTTSCCBTTBCC-SEEE-EEETTSCEEEECTTCC
T ss_pred HHHHHHhhhcccccCCcE-eeEE-EEeCCCCEEEcCCCcc
Confidence 99999988743 23001 2233 3467999999888865
No 80
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=28.82 E-value=1e+02 Score=26.66 Aligned_cols=59 Identities=12% Similarity=0.061 Sum_probs=39.3
Q ss_pred CCeeeeCC-CceeehhhhcCcceeEEE-ecCHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 151 RLPLRLST-NRIVELVQLRGTVRPVIL-AGRKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 151 rL~V~l~~-~r~v~L~qLRg~aRvVIv-AG~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+.+.-.+ |+.++|++|||..-+|.. |-.-..+. -+..-+.+.+++.+.|+.||-|..+
T Consensus 37 dF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d 97 (215)
T 2i3y_A 37 DYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCN 97 (215)
T ss_dssp GCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEcc
Confidence 44444447 899999999996433332 22222233 4556677888888999999999874
No 81
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=28.56 E-value=1.3e+02 Score=24.00 Aligned_cols=52 Identities=13% Similarity=0.143 Sum_probs=37.6
Q ss_pred CC--ceeehhh-hcCcceeEEEecCH---HHHH-HHHHHHHHHHHHHhhcCcE-EEEEEeC
Q 020414 158 TN--RIVELVQ-LRGTVRPVILAGRK---ETVS-LAIQKAERFRTDLLRRGVL-LVPVIWG 210 (326)
Q Consensus 158 ~~--r~v~L~q-LRg~aRvVIvAG~~---e~V~-~Al~~Ae~~r~~L~~rgVL-VVPVv~~ 210 (326)
+| +.++|++ ++|.. +||.-.++ ..+. .-+..-+.+.+++.+.||- ||-|..+
T Consensus 21 ~G~~~~~~l~~~~~gk~-vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d 80 (162)
T 1tp9_A 21 QDQLQEVSVHSLVAGKK-VILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN 80 (162)
T ss_dssp TSCEEEEESHHHHTTSE-EEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS
T ss_pred CCCceeEeHHHHhCCCc-EEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 67 8999999 89864 44443322 4566 5566677778888889999 9988774
No 82
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=28.11 E-value=1.4e+02 Score=24.57 Aligned_cols=51 Identities=10% Similarity=0.020 Sum_probs=37.5
Q ss_pred ceeehhhhcCcceeEEEe-c-CHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 160 RIVELVQLRGTVRPVILA-G-RKETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 160 r~v~L~qLRg~aRvVIvA-G-~~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+.++|.+++|..-++... + --..+...+..-+.+.+++.++||-||-|..+
T Consensus 27 ~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D 79 (202)
T 1uul_A 27 KKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD 79 (202)
T ss_dssp EEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred cEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 899999999853333332 2 22356667777788888899999999999874
No 83
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=27.12 E-value=50 Score=29.52 Aligned_cols=52 Identities=12% Similarity=-0.020 Sum_probs=39.1
Q ss_pred CCceeehhhhcCcceeEEEecCH---HHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVILAGRK---ETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~~---e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+++.++|.+++|.. +||.-.++ ..+..-+...+.+.+++.++||-||-|..+
T Consensus 80 ~G~~vsLsd~kGK~-vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D 134 (254)
T 3tjj_A 80 EFKELKLTDYRGKY-LVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD 134 (254)
T ss_dssp EEEEEEGGGGTTSE-EEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS
T ss_pred CCcEEeHHHHCCCe-EEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 46899999999964 44444433 345667777788888999999999999874
No 84
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=26.93 E-value=1.5e+02 Score=25.11 Aligned_cols=52 Identities=15% Similarity=0.049 Sum_probs=38.9
Q ss_pred CC--ceeehhhh-cCcceeEEEecC---HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TN--RIVELVQL-RGTVRPVILAGR---KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~--r~v~L~qL-Rg~aRvVIvAG~---~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+| +.++|.++ +|.. +||.-.+ -..+...+..-+.+.+++.+.||-||-|..+
T Consensus 38 ~G~~~~v~l~d~~~gk~-vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 95 (213)
T 2i81_A 38 DNSFGEVNLTQFIGKKY-VLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD 95 (213)
T ss_dssp TSCEEEEEGGGGTTTCE-EEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CCceeEEeHHHHcCCCe-EEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57 89999999 8864 4443332 3356667777778888898899999999874
No 85
>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A
Probab=26.53 E-value=32 Score=27.89 Aligned_cols=33 Identities=24% Similarity=0.547 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhcCCCCCCcEEEEEeeCceeeecCCC
Q 020414 268 WERWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGKG 303 (326)
Q Consensus 268 W~~wi~eQ~~~aGv~~~~gVyi~LrlDGRVr~SG~G 303 (326)
|+.|+++++-..|- ..+.. ++..||.||.+-.|
T Consensus 2 Wq~yvd~~L~~~g~-~~~aA--Iig~dGsvwA~s~~ 34 (125)
T 1acf_A 2 WQTYVDTNLVGTGA-VTQAA--ILGLDGNTWATSAG 34 (125)
T ss_dssp HHHHHHTTTGGGTS-CSEEE--EEETTSCEEEECTT
T ss_pred hHHHHHhhhhhCCC-cceEE--EEcCCCCEEEecCC
Confidence 99999997755552 22333 56679999999665
No 86
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=25.81 E-value=2.5e+02 Score=25.05 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=35.6
Q ss_pred eeeh-hhh--cCcceeEEEecCH---HHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 161 IVEL-VQL--RGTVRPVILAGRK---ETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 161 ~v~L-~qL--Rg~aRvVIvAG~~---e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+++ .++ +|. -+|++-=++ ..+..-+.....+.+++.++||-||-|..+
T Consensus 22 ~v~l~~d~l~~GK-~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D 76 (249)
T 3a2v_A 22 VIKLPDHYVSQGK-WFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD 76 (249)
T ss_dssp EEEETHHHHTTTC-EEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CEecHHHHhhCCC-EEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 6899 999 874 234433232 345666777778888999999999999885
No 87
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=25.68 E-value=2e+02 Score=24.81 Aligned_cols=58 Identities=9% Similarity=0.254 Sum_probs=43.0
Q ss_pred CeeeeCCCceeehhhhcCcceeEEEecCH---HHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 152 LPLRLSTNRIVELVQLRGTVRPVILAGRK---ETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 152 L~V~l~~~r~v~L~qLRg~aRvVIvAG~~---e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
..+.-.+| .+++.+++|...+|++-=++ ..+..-+.....+.+++.++||-||-|..+
T Consensus 14 F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D 74 (224)
T 1prx_A 14 FEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID 74 (224)
T ss_dssp CEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS
T ss_pred cEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 33433356 89999999986666654332 356677788888889999999999999875
No 88
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=23.45 E-value=27 Score=28.19 Aligned_cols=54 Identities=9% Similarity=0.110 Sum_probs=34.3
Q ss_pred CCCceeehhhhcCcceeEEEe-cC-HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 157 STNRIVELVQLRGTVRPVILA-GR-KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 157 ~~~r~v~L~qLRg~aRvVIvA-G~-~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
.+|+.++|++|||..-++..- ++ -..+..-+..-+.+.+++.+.|+.+|-|..+
T Consensus 18 ~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d 73 (157)
T 4g2e_A 18 TELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD 73 (157)
T ss_dssp TTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS
T ss_pred CCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc
Confidence 378999999999975444332 32 2345555555666777889999999988763
No 89
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=22.88 E-value=1.3e+02 Score=25.70 Aligned_cols=52 Identities=12% Similarity=0.041 Sum_probs=37.9
Q ss_pred CCceeehhhhcCcceeEEEecC---HHHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVILAGR---KETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~---~e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+++.++|.+++|.. +||.--+ -..+...+...+.+.+++.++||-||-|..+
T Consensus 45 ~g~~v~l~d~~Gk~-vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 99 (220)
T 1zye_A 45 EFKEISLDDFKGKY-LVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD 99 (220)
T ss_dssp SEEEEEGGGGTTSE-EEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred CCcEEEHHHhCCCe-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 56899999999943 3333332 2355666777777888898999999999885
No 90
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=22.33 E-value=1.6e+02 Score=24.73 Aligned_cols=52 Identities=29% Similarity=0.300 Sum_probs=37.1
Q ss_pred CC-ceeehhh-hcCcceeEEEe--c-CHHHHHH-HHHHHHHHHHHHhhcCcE-EEEEEeC
Q 020414 158 TN-RIVELVQ-LRGTVRPVILA--G-RKETVSL-AIQKAERFRTDLLRRGVL-LVPVIWG 210 (326)
Q Consensus 158 ~~-r~v~L~q-LRg~aRvVIvA--G-~~e~V~~-Al~~Ae~~r~~L~~rgVL-VVPVv~~ 210 (326)
+| +.++|++ ++|. .+||+- + --..+.. =+..-+.+.+++.++||- ||-|..+
T Consensus 43 ~G~~~v~L~d~~~Gk-~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d 101 (184)
T 3uma_A 43 DGPVEVTTELLFKGK-RVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN 101 (184)
T ss_dssp TEEEEEEHHHHHTTS-EEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS
T ss_pred CCceEEeHHHHhCCC-CEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC
Confidence 56 8999999 7886 344442 3 2345555 366677778889999998 9988874
No 91
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=21.30 E-value=1.8e+02 Score=25.43 Aligned_cols=52 Identities=13% Similarity=0.265 Sum_probs=40.1
Q ss_pred CCceeehhhhcCcceeEEEecCH---HHHHHHHHHHHHHHHHHhhcCcEEEEEEeC
Q 020414 158 TNRIVELVQLRGTVRPVILAGRK---ETVSLAIQKAERFRTDLLRRGVLLVPVIWG 210 (326)
Q Consensus 158 ~~r~v~L~qLRg~aRvVIvAG~~---e~V~~Al~~Ae~~r~~L~~rgVLVVPVv~~ 210 (326)
+| .++|.+++|..-+|+.-=++ ..+..-+.....+.+++.++||-||-|..+
T Consensus 18 ~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D 72 (233)
T 2v2g_A 18 IG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD 72 (233)
T ss_dssp TC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS
T ss_pred CC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 56 89999999975555554332 356677778888889999999999999875
Done!