Your job contains 1 sequence.
>020417
MSFSKICLSRFAPLGSPNSLSAFPFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSSTHQ
KGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVL
DLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHD
TALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP
YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA
DGARVQITARRNPDSRNVQYLFEDRI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020417
(326 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2083636 - symbol:AT3G15140 "AT3G15140" species... 968 2.0e-97 1
UNIPROTKB|Q5ZL01 - symbol:ERI1 "Uncharacterized protein" ... 250 2.4e-21 1
ZFIN|ZDB-GENE-050522-39 - symbol:eri1 "exoribonuclease 1"... 250 2.4e-21 1
WB|WBGene00019825 - symbol:R02D3.8 species:6239 "Caenorha... 248 3.9e-21 1
MGI|MGI:1914526 - symbol:Eri1 "exoribonuclease 1" species... 244 1.0e-20 1
UNIPROTKB|E2QU14 - symbol:ERI1 "Uncharacterized protein" ... 243 1.3e-20 1
UNIPROTKB|Q8IV48 - symbol:ERI1 "3'-5' exoribonuclease 1" ... 243 1.3e-20 1
UNIPROTKB|I3LQQ1 - symbol:ERI1 "Uncharacterized protein" ... 242 1.7e-20 1
RGD|1308378 - symbol:Eri1 "exoribonuclease 1" species:101... 242 1.7e-20 1
UNIPROTKB|Q32LA2 - symbol:THEX1 "Uncharacterized protein"... 241 2.1e-20 1
WB|WBGene00019724 - symbol:M02B7.2 species:6239 "Caenorha... 240 2.7e-20 1
UNIPROTKB|E2RAN5 - symbol:ERI3 "Uncharacterized protein" ... 228 8.3e-19 1
DICTYBASE|DDB_G0283113 - symbol:eriA "RNA exonuclease" sp... 222 2.2e-18 1
UNIPROTKB|A6QLH5 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 226 3.7e-18 1
UNIPROTKB|O43414 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 226 3.7e-18 1
MGI|MGI:2153887 - symbol:Eri3 "exoribonuclease 3" species... 224 1.1e-17 1
UNIPROTKB|H0Y4B0 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 168 2.1e-17 2
UNIPROTKB|G3MZQ7 - symbol:ERI1 "Uncharacterized protein" ... 219 1.1e-16 1
UNIPROTKB|E1BVJ4 - symbol:ERI2 "Uncharacterized protein" ... 204 1.9e-16 1
UNIPROTKB|F1P8R6 - symbol:ERI2 "Uncharacterized protein" ... 210 1.2e-14 1
ZFIN|ZDB-GENE-050522-292 - symbol:zgc:111991 "zgc:111991"... 200 1.6e-13 1
UNIPROTKB|A8K979 - symbol:ERI2 "ERI1 exoribonuclease 2" s... 200 2.4e-13 1
UNIPROTKB|F1ML00 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 174 6.1e-13 1
UNIPROTKB|B4DEX5 - symbol:ERI3 "Prion protein interacting... 174 6.1e-13 1
MGI|MGI:1918401 - symbol:Eri2 "exoribonuclease 2" species... 195 9.5e-13 1
UNIPROTKB|E1BJE4 - symbol:ERI2 "Uncharacterized protein" ... 195 9.6e-13 1
UNIPROTKB|F6QUN3 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 172 1.0e-12 1
RGD|1583889 - symbol:Eri2 "ERI1 exoribonuclease family me... 194 1.3e-12 1
WB|WBGene00000797 - symbol:crn-4 species:6239 "Caenorhabd... 180 6.8e-12 1
WB|WBGene00001332 - symbol:eri-1 species:6239 "Caenorhabd... 185 1.1e-11 1
POMBASE|SPBC30B4.08 - symbol:eri1 "double-strand siRNA ri... 154 1.1e-08 1
UNIPROTKB|F6UGJ8 - symbol:ERI3 "ERI1 exoribonuclease 3" s... 116 0.00016 1
UNIPROTKB|F1S331 - symbol:ERI3 "Uncharacterized protein" ... 116 0.00016 1
RGD|1595859 - symbol:Eri3 "ERI1 exoribonuclease family me... 116 0.00017 1
UNIPROTKB|F1NBT2 - symbol:F1NBT2 "Uncharacterized protein... 113 0.00025 1
>TAIR|locus:2083636 [details] [associations]
symbol:AT3G15140 "AT3G15140" species:3702 "Arabidopsis
thaliana" [GO:0004527 "exonuclease activity" evidence=ISS]
[GO:0005622 "intracellular" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0009220 "pyrimidine
ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003676 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
HSSP:Q8IV48 HOGENOM:HOG000218353 EMBL:AP001299 EMBL:AF419612
EMBL:AY079112 IPI:IPI00525491 RefSeq:NP_566502.1 UniGene:At.27380
ProteinModelPortal:Q8W566 SMR:Q8W566 EnsemblPlants:AT3G15140.1
GeneID:820745 KEGG:ath:AT3G15140 TAIR:At3g15140 InParanoid:Q8W566
OMA:PYFMEWI PhylomeDB:Q8W566 ProtClustDB:CLSN2688393
Genevestigator:Q8W566 Uniprot:Q8W566
Length = 337
Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
Identities = 174/264 (65%), Positives = 216/264 (81%)
Query: 64 STRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLE 123
+ RWRPMCLY+T GKCT MDD HLE FNHD S++L+V AA + K SQ+ +FFLV+DLE
Sbjct: 76 NARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFNFFLVIDLE 135
Query: 124 GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
GK+EILEFP+L++DAKTM VDLFHRFVRP+KMSEQ INKYIEGKYG+ GVDRVWHDTA+
Sbjct: 136 GKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDRVWHDTAI 195
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
PFK+V+++FE WL +H LW+K L AAF TCGNWD+KTK+P+QC VS I LPPYFM
Sbjct: 196 PFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNINLPPYFM 255
Query: 244 EWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGA 303
EWINLKDV+ NFY EA GM+ MM+ + + GSHHLGIDDTKNITRV+QRML++GA
Sbjct: 256 EWINLKDVYLNFYG---REARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRMLSEGA 312
Query: 304 RVQITARRNPDS-RNVQYLFEDRI 326
+++TARR+ + RNV++LF++RI
Sbjct: 313 VLKLTARRSKSNMRNVEFLFKNRI 336
>UNIPROTKB|Q5ZL01 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0071207 "histone pre-mRNA stem-loop
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 Gene3D:1.10.720.30
InterPro:IPR013520 SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408
KO:K01175 GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205
CTD:90459 HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:AADN02009127
EMBL:AJ719933 IPI:IPI00571536 RefSeq:NP_001006450.1
UniGene:Gga.2609 SMR:Q5ZL01 Ensembl:ENSGALT00000018669
GeneID:422629 KEGG:gga:422629 InParanoid:Q5ZL01 NextBio:20825234
Uniprot:Q5ZL01
Length = 327
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 61/185 (32%), Positives = 100/185 (54%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN-KYIEGKYGKFGVDRVWHDTALPF 185
EI+EFPV++++ T+ D F ++V+P IN K E G G+ + D A F
Sbjct: 128 EIIEFPVVLLNTHTLEIEDTFQQYVKPE------INPKLSEFCVGLTGITQDIVDKADTF 181
Query: 186 KEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEW 245
+V+Q W+ Q L K T G+WD+ + QC+VS+IK P + +W
Sbjct: 182 PQVLQNVVDWMRQRELGTK------YSYCMLTDGSWDMSKFLNIQCRVSRIKHPSFAKKW 235
Query: 246 INLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARV 305
IN++ + NFYK +++ T +M M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 236 INIRKSYGNFYKVPRNQ-TKLMIMLEKLGMSYDGRPHSGLDDSKNIARIAIRMLQDGCQL 294
Query: 306 QITAR 310
++ +
Sbjct: 295 RVNEK 299
>ZFIN|ZDB-GENE-050522-39 [details] [associations]
symbol:eri1 "exoribonuclease 1" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 SMART:SM00479 SMART:SM00513
Pfam:PF00929 ZFIN:ZDB-GENE-050522-39 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOGENOM:HOG000006635
HOVERGEN:HBG048925 EMBL:BX511222 EMBL:BC095343 IPI:IPI00631298
RefSeq:NP_001018450.1 UniGene:Dr.15106 SMR:Q503G0
Ensembl:ENSDART00000065671 GeneID:553641 KEGG:dre:553641
InParanoid:Q503G0 NextBio:20880375 Uniprot:Q503G0
Length = 337
Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
Identities = 56/181 (30%), Positives = 104/181 (57%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP+++ID T+ VD F +V+P + ++++ K G+ + D A F
Sbjct: 138 EIIEFPMVLIDTHTLEIVDSFQEYVKP--VLHPQLSEFCV-KLT--GITQEMVDEAKTFH 192
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ +WL + L K + F T G+WD+ + QCK+S+I+ P + +WI
Sbjct: 193 QVLKRAISWLQEKELGTK------YKYMFLTDGSWDMGKFLHTQCKLSRIRYPQFARKWI 246
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +++ T ++ M++N + G H G+DD++NI R+ ML DG +++
Sbjct: 247 NIRKSYGNFYKVPRTQ-TKLICMLENLGMEYDGRPHCGLDDSRNIARIAIHMLKDGCQLR 305
Query: 307 I 307
+
Sbjct: 306 V 306
>WB|WBGene00019825 [details] [associations]
symbol:R02D3.8 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:FO081663
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353
OMA:PYFMEWI PIR:T15066 PIR:T28707 RefSeq:NP_499887.1
ProteinModelPortal:Q9TZZ9 SMR:Q9TZZ9 STRING:Q9TZZ9
EnsemblMetazoa:R02D3.8 GeneID:176845 KEGG:cel:CELE_R02D3.8
UCSC:R02D3.8 CTD:176845 WormBase:R02D3.8 InParanoid:Q9TZZ9
NextBio:894262 Uniprot:Q9TZZ9
Length = 266
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 67/222 (30%), Positives = 109/222 (49%)
Query: 109 KCSQDLDFFLVLDLE--------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
K SQ D+ LVLD E G + EI+EFPV+ + + + FH++V+P++
Sbjct: 53 KMSQHFDYLLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYVKPTEC 112
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
+ + G + V LP +V+ +F++WL + EKG+ AF
Sbjct: 113 PR--LTSFCTSLTGIIQ-EMVDEKPTLP--QVLSEFDSWLKEDSRLEKGK------FAFV 161
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVP 276
TCG+WDLK +P++ K I +P YF +WIN+K A G+ ++ ++
Sbjct: 162 TCGDWDLKVALPNEAKFKNIGIPEYFNQWINVKKASAEH---TNHFAKGIAQLLAIYKLQ 218
Query: 277 MFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNV 318
G HH GIDD NI +++ + +G QIT ++ +R V
Sbjct: 219 HQGRHHSGIDDVANICEIVRCLGMNGHNYQITGSKDTMTRRV 260
>MGI|MGI:1914526 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0019843 "rRNA binding" evidence=IDA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0031125 "rRNA 3'-end
processing" evidence=IDA] [GO:0043022 "ribosome binding"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=IDA] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IDA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 MGI:MGI:1914526 GO:GO:0005737
GO:GO:0005730 GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175
GO:GO:0031125 eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OrthoDB:EOG4NGGN1
GO:GO:0071204 GO:GO:0071207 EMBL:AK014041 EMBL:AK014410
EMBL:AK050230 EMBL:AK165026 EMBL:AK172005 EMBL:BC046412
IPI:IPI00330329 RefSeq:NP_080343.4 UniGene:Mm.207534
ProteinModelPortal:Q7TMF2 SMR:Q7TMF2 STRING:Q7TMF2
PhosphoSite:Q7TMF2 PRIDE:Q7TMF2 Ensembl:ENSMUST00000033927
GeneID:67276 KEGG:mmu:67276 UCSC:uc009lky.2 InParanoid:Q3TNT0
NextBio:324080 Bgee:Q7TMF2 CleanEx:MM_THEX1 Genevestigator:Q7TMF2
GermOnline:ENSMUSG00000031527 Uniprot:Q7TMF2
Length = 345
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 58/184 (31%), Positives = 104/184 (56%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++++ T+ D F ++VRP +++ Q ++++ G G D+V D A F
Sbjct: 146 EIIEFPVVLLNTHTLEIEDTFQQYVRP-EVNAQ-LSEFCIGLTG-ITQDQV--DRADAFP 200
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + T G+WD+ + QC++S++K P + +WI
Sbjct: 201 QVLKKVIEWMKSKELGTK------YKYCILTDGSWDMSKFLSIQCRLSRLKHPAFAKKWI 254
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 255 NIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELR 313
Query: 307 ITAR 310
I +
Sbjct: 314 INEK 317
>UNIPROTKB|E2QU14 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 CTD:90459 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 EMBL:AAEX03010431 RefSeq:XP_539997.2
Ensembl:ENSCAFT00000010754 GeneID:482882 KEGG:cfa:482882
NextBio:20857381 Uniprot:E2QU14
Length = 349
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 58/184 (31%), Positives = 103/184 (55%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++++ T+ D F ++VRP +++ Q ++ + G D+V D A F
Sbjct: 150 EIIEFPVVLLNTHTLEIEDTFQQYVRP-ELNTQ-LSDFCINLTG-ITQDQV--DRADTFP 204
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + T G+WD+ + QC++S++K PP+ +WI
Sbjct: 205 QVLKKVIDWMKLKELGTK------YKYCILTDGSWDMSKFLNIQCRLSRLKYPPFAKKWI 258
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 259 NIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELR 317
Query: 307 ITAR 310
I +
Sbjct: 318 INEK 321
>UNIPROTKB|Q8IV48 [details] [associations]
symbol:ERI1 "3'-5' exoribonuclease 1" species:9606 "Homo
sapiens" [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0031125 "rRNA 3'-end processing"
evidence=ISS] [GO:0043022 "ribosome binding" evidence=ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISS] [GO:0071044 "histone mRNA catabolic process"
evidence=IMP] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR003034 InterPro:IPR006055 InterPro:IPR012337
Pfam:PF02037 PROSITE:PS50800 SMART:SM00479 SMART:SM00513
Pfam:PF00929 GO:GO:0005737 GO:GO:0005730 GO:GO:0046872
DrugBank:DB00131 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 EMBL:AY310909 EMBL:AK291062 EMBL:AL137679
EMBL:BC035279 IPI:IPI00216873 PIR:T46432 RefSeq:NP_699163.2
UniGene:Hs.20000 PDB:1W0H PDB:1ZBH PDB:1ZBU PDBsum:1W0H PDBsum:1ZBH
PDBsum:1ZBU ProteinModelPortal:Q8IV48 SMR:Q8IV48 STRING:Q8IV48
PhosphoSite:Q8IV48 DMDM:45476938 PaxDb:Q8IV48 PeptideAtlas:Q8IV48
PRIDE:Q8IV48 DNASU:90459 Ensembl:ENST00000250263
Ensembl:ENST00000519292 Ensembl:ENST00000523898 GeneID:90459
KEGG:hsa:90459 UCSC:uc003wsk.2 CTD:90459 GeneCards:GC08P008900
HGNC:HGNC:23994 HPA:CAB033838 MIM:608739 neXtProt:NX_Q8IV48
PharmGKB:PA164719226 HOGENOM:HOG000006635 HOVERGEN:HBG048925
InParanoid:Q8IV48 OMA:ICVIDFE OrthoDB:EOG4NGGN1 PhylomeDB:Q8IV48
EvolutionaryTrace:Q8IV48 GenomeRNAi:90459 NextBio:76770
ArrayExpress:Q8IV48 Bgee:Q8IV48 CleanEx:HS_ERI1
Genevestigator:Q8IV48 GermOnline:ENSG00000104626 GO:GO:0071204
GO:GO:0071207 Uniprot:Q8IV48
Length = 349
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 58/184 (31%), Positives = 104/184 (56%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++++ T+ D F ++VRP +++ Q ++ + G D+V D A F
Sbjct: 150 EIIEFPVVLLNTHTLEIEDTFQQYVRP-EINTQ-LSDFCISLTG-ITQDQV--DRADTFP 204
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + + T G+WD+ + QC++S++K PP+ +WI
Sbjct: 205 QVLKKVIDWMKLKELGTK------YKYSLLTDGSWDMSKFLNIQCQLSRLKYPPFAKKWI 258
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 259 NIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELR 317
Query: 307 ITAR 310
I +
Sbjct: 318 INEK 321
>UNIPROTKB|I3LQQ1 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=IEA] [GO:0071204 "histone pre-mRNA 3'end processing
complex" evidence=IEA] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0031125 "rRNA 3'-end processing" evidence=IEA] [GO:0019843
"rRNA binding" evidence=IEA] [GO:0008408 "3'-5' exonuclease
activity" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0043022 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0019843 GO:GO:0008408 GO:GO:0031125
GeneTree:ENSGT00530000063205 OMA:ICVIDFE GO:GO:0071204
GO:GO:0071207 Ensembl:ENSSSCT00000031051 Uniprot:I3LQQ1
Length = 313
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 57/184 (30%), Positives = 104/184 (56%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++++ T+ D F ++VRP +++ Q ++ + G D+V D A F
Sbjct: 114 EIIEFPVVLLNTHTLEIEDTFQQYVRP-EINTQ-LSDFCINLTG-ITQDQV--DKADTFP 168
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + + T G+WD+ + QC++S++K PP+ +WI
Sbjct: 169 QVLKKVIDWMKLKELGTK------YKYSILTDGSWDMSKFLNIQCRLSRLKYPPFAKKWI 222
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 223 NIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELR 281
Query: 307 ITAR 310
+ +
Sbjct: 282 VNEK 285
>RGD|1308378 [details] [associations]
symbol:Eri1 "exoribonuclease 1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISO;ISS] [GO:0019843 "rRNA binding" evidence=ISO;ISS]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0031125 "rRNA
3'-end processing" evidence=ISO;ISS] [GO:0043022 "ribosome binding"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0071044 "histone mRNA catabolic process" evidence=ISO;ISS]
[GO:0071204 "histone pre-mRNA 3'end processing complex"
evidence=ISO;ISS] [GO:0071207 "histone pre-mRNA stem-loop binding"
evidence=ISO;ISS] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 RGD:1308378 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0043022 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0031047 GO:GO:0019843 GO:GO:0008408 KO:K01175 GO:GO:0031125
eggNOG:COG5018 GeneTree:ENSGT00530000063205 CTD:90459
HOGENOM:HOG000006635 HOVERGEN:HBG048925 OMA:ICVIDFE
OrthoDB:EOG4NGGN1 GO:GO:0071204 GO:GO:0071207 EMBL:BC089828
IPI:IPI00364660 RefSeq:NP_001014165.1 UniGene:Rn.17469
ProteinModelPortal:Q5FVR4 SMR:Q5FVR4 STRING:Q5FVR4 PRIDE:Q5FVR4
Ensembl:ENSRNOT00000015239 GeneID:361159 KEGG:rno:361159
UCSC:RGD:1308378 InParanoid:Q5FVR4 NextBio:675391
Genevestigator:Q5FVR4 GermOnline:ENSRNOG00000011448 Uniprot:Q5FVR4
Length = 345
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 57/184 (30%), Positives = 102/184 (55%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++++ ++ D F ++VRP S+ ++++ G G D+V D A F
Sbjct: 146 EIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQ--LSEFCIGLTG-ITQDQV--DRADAFP 200
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + T G+WD+ + QC++S++K P + +WI
Sbjct: 201 QVLKKVIEWMKSKELGTK------YKYCILTDGSWDMSKFLNIQCQLSRLKYPSFAKKWI 254
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 255 NIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELR 313
Query: 307 ITAR 310
I +
Sbjct: 314 INEK 317
>UNIPROTKB|Q32LA2 [details] [associations]
symbol:THEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:90459 HOVERGEN:HBG048925
OMA:ICVIDFE EMBL:DAAA02060421 EMBL:BC109681 IPI:IPI00692488
RefSeq:NP_001033281.1 UniGene:Bt.22450 SMR:Q32LA2
Ensembl:ENSBTAT00000012775 GeneID:540728 KEGG:bta:540728
InParanoid:Q32LA2 NextBio:20878798 Uniprot:Q32LA2
Length = 349
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 57/184 (30%), Positives = 104/184 (56%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++++ T+ D F ++VRP +++ Q ++ + G D+V D A F
Sbjct: 150 EIIEFPVVLLNTHTLEIEDTFQQYVRP-EINTQ-LSDFCINLTG-ITQDQV--DKADTFP 204
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + + T G+WD+ + QC++S++K PP+ +WI
Sbjct: 205 QVLKKVIDWMKLKELGTK------YKYSILTDGSWDMSKFLNIQCQLSRLKYPPFAKKWI 258
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
N++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++
Sbjct: 259 NIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAVRMLQDGCELR 317
Query: 307 ITAR 310
+ +
Sbjct: 318 VNEK 321
>WB|WBGene00019724 [details] [associations]
symbol:M02B7.2 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 HOGENOM:HOG000218353 EMBL:FO081251
PIR:T29900 RefSeq:NP_500418.1 ProteinModelPortal:Q94285 SMR:Q94285
STRING:Q94285 PaxDb:Q94285 EnsemblMetazoa:M02B7.2 GeneID:187397
KEGG:cel:CELE_M02B7.2 UCSC:M02B7.2 CTD:187397 WormBase:M02B7.2
InParanoid:Q94285 OMA:CTWINIK NextBio:935118 Uniprot:Q94285
Length = 266
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 73/274 (26%), Positives = 123/274 (44%)
Query: 70 MCLYFTQGKCTMMDDVMHLEKF--------NHDISR-----DLQVDAAAFQHKCSQDLDF 116
M + FT+ ++D V H F D+ + V K SQ D+
Sbjct: 1 MSINFTRTPKLLLDKVAHYSSFVESTKLVKTRDVKKPPRYPSFSVKKPTKNQKISQHFDY 60
Query: 117 FLVLDLE--------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
LVLD E G + EI+EFPV+ + + + FH++++P++ + +
Sbjct: 61 LLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYIKPTEFPR--LTSF 118
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ + V LP EV+ +F++WL + ++G AF TCG+WDLK
Sbjct: 119 CTS-LTRIIQEMVDEKPKLP--EVLSEFDSWLKEDSRLKQGN------FAFVTCGDWDLK 169
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+P + K I++P YF +WIN+K + A GM ++ ++ G H G
Sbjct: 170 VALPSEAKFKNIEIPEYFNQWINVKKAYAEH---TNHFAKGMTQLLAIYKLQHQGRLHSG 226
Query: 285 IDDTKNITRVLQRMLADGARVQITARRNPDSRNV 318
IDD NI +++ + DG +IT ++ +R V
Sbjct: 227 IDDVANICEIVRCLGRDGHNYRITGSKDTMTRRV 260
>UNIPROTKB|E2RAN5 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 CTD:79033 OMA:FPALTEH
EMBL:AAEX03009798 EMBL:AAEX03009797 RefSeq:XP_850849.2
Ensembl:ENSCAFT00000007745 GeneID:475384 KEGG:cfa:475384
Uniprot:E2RAN5
Length = 337
Score = 228 (85.3 bits), Expect = 8.3e-19, P = 8.3e-19
Identities = 57/199 (28%), Positives = 96/199 (48%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K +P QC+ + + YF +WINLK Y+F + G++ M K + G H
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK-NGLLDMNKGLSLQHIGRPHS 308
Query: 284 GIDDTKNITRVLQRMLADG 302
GIDD KNI +++ + G
Sbjct: 309 GIDDCKNIANIMKTLAYQG 327
>DICTYBASE|DDB_G0283113 [details] [associations]
symbol:eriA "RNA exonuclease" species:44689
"Dictyostelium discoideum" [GO:0005622 "intracellular"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 dictyBase:DDB_G0283113
Pfam:PF00929 GenomeReviews:CM000153_GR GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AAFI02000050
eggNOG:COG5018 RefSeq:XP_639244.1 ProteinModelPortal:Q54RJ2
EnsemblProtists:DDB0231961 GeneID:8623930 KEGG:ddi:DDB_G0283113
InParanoid:Q54RJ2 OMA:KRHEMEI ProtClustDB:CLSZ2728980
Uniprot:Q54RJ2
Length = 220
Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 55/200 (27%), Positives = 100/200 (50%)
Query: 114 LDFFLVLDLEGKI---EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYG 170
LDF + + K EI+EFP ++I+ +T+ V F +V+P + +++K+ G
Sbjct: 27 LDFEATCEKDVKFPNQEIIEFPSVIINTETLETVSTFREYVKP--IINPNLSKFCTELTG 84
Query: 171 KFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQ 230
+ + + A F +V++ W + + F CG+WDL +P Q
Sbjct: 85 ---IKQETVENAALFPDVLKSHCDWFFE----SLPKDIQSDEYCFVCCGDWDLLQCLPKQ 137
Query: 231 CKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTK 289
K+ + + P Y +WIN+K + FY R S GM M++ +P+ G HH G+ D+
Sbjct: 138 LKLCNNLSKPSYLSKWINIKKQYTLFYN-RPS--FGMTNMLRELNIPLEGRHHCGLSDSL 194
Query: 290 NITRVLQRMLADGARVQITA 309
NI+++L+RM+ +G + +
Sbjct: 195 NISKILKRMIEEGCNFDLVS 214
>UNIPROTKB|A6QLH5 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098 eggNOG:COG5018
GeneTree:ENSGT00530000063205 EMBL:BC147967 IPI:IPI00692999
RefSeq:NP_001106713.1 UniGene:Bt.5101 ProteinModelPortal:A6QLH5
Ensembl:ENSBTAT00000020671 GeneID:540516 KEGG:bta:540516 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 InParanoid:A6QLH5
OMA:FPALTEH OrthoDB:EOG4ZKJMJ NextBio:20878677 ArrayExpress:A6QLH5
Uniprot:A6QLH5
Length = 337
Score = 226 (84.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/199 (28%), Positives = 96/199 (48%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K +P QC+ + + YF +WINLK Y+F + G++ M K + G H
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK-NGLLDMNKGLSLQHIGRPHS 308
Query: 284 GIDDTKNITRVLQRMLADG 302
GIDD KNI +++ + G
Sbjct: 309 GIDDCKNIANIMKTLAYRG 327
>UNIPROTKB|O43414 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479
Pfam:PF00929 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 EMBL:AL035417 CTD:79033 HOVERGEN:HBG108293
OrthoDB:EOG4ZKJMJ EMBL:AF007157 EMBL:AK290567 EMBL:AL390776
EMBL:AC004254 EMBL:BC001072 EMBL:BC004456 IPI:IPI00020701
IPI:IPI00644349 IPI:IPI00888358 RefSeq:NP_076971.1
UniGene:Hs.731413 PDB:2XRI PDBsum:2XRI ProteinModelPortal:O43414
SMR:O43414 STRING:O43414 PhosphoSite:O43414 PaxDb:O43414
PRIDE:O43414 DNASU:79033 Ensembl:ENST00000372257
Ensembl:ENST00000372259 GeneID:79033 KEGG:hsa:79033 UCSC:uc001clt.3
GeneCards:GC01M044686 HGNC:HGNC:17276 HPA:HPA027147 MIM:609917
neXtProt:NX_O43414 PharmGKB:PA164719272 EvolutionaryTrace:O43414
GenomeRNAi:79033 NextBio:67747 ArrayExpress:O43414 Bgee:O43414
CleanEx:HS_ERI3 Genevestigator:O43414 Uniprot:O43414
Length = 337
Score = 226 (84.6 bits), Expect = 3.7e-18, P = 3.7e-18
Identities = 57/199 (28%), Positives = 96/199 (48%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K +P QC+ + + YF +WINLK Y+F + G++ M K + G H
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK-NGLLDMNKGLSLQHIGRPHS 308
Query: 284 GIDDTKNITRVLQRMLADG 302
GIDD KNI +++ + G
Sbjct: 309 GIDDCKNIANIMKTLAYRG 327
>MGI|MGI:2153887 [details] [associations]
symbol:Eri3 "exoribonuclease 3" species:10090 "Mus musculus"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 MGI:MGI:2153887
GO:GO:0005886 GO:GO:0046872 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520 SUPFAM:SSF53098
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HSSP:Q8IV48 CTD:79033
HOGENOM:HOG000218353 HOVERGEN:HBG108293 OMA:FPALTEH
OrthoDB:EOG4ZKJMJ EMBL:AK083017 EMBL:AK144107 EMBL:AL645740
EMBL:AL671520 EMBL:BC079640 EMBL:BC116685 EMBL:BC117540
EMBL:AY029599 IPI:IPI00225264 IPI:IPI00471104 IPI:IPI00649884
RefSeq:NP_536717.2 UniGene:Mm.235891 ProteinModelPortal:Q8C460
SMR:Q8C460 STRING:Q8C460 PhosphoSite:Q8C460 PaxDb:Q8C460
PRIDE:Q8C460 DNASU:140546 Ensembl:ENSMUST00000037127
Ensembl:ENSMUST00000125312 Ensembl:ENSMUST00000144373 GeneID:140546
KEGG:mmu:140546 UCSC:uc008uis.1 UCSC:uc008uit.1 InParanoid:Q8C460
ChiTaRS:ERI3 NextBio:369851 Bgee:Q8C460 CleanEx:MM_PRNPIP1
Genevestigator:Q8C460 Uniprot:Q8C460
Length = 337
Score = 224 (83.9 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 57/199 (28%), Positives = 95/199 (47%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K +P QC + + YF +WINLK Y+F + G++ M K + G H
Sbjct: 251 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK-NGLLDMNKGLSLQHIGRPHS 308
Query: 284 GIDDTKNITRVLQRMLADG 302
GIDD KNI +++ + G
Sbjct: 309 GIDDCKNIANIMKTLAYRG 327
>UNIPROTKB|H0Y4B0 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
EMBL:AL390776 HGNC:HGNC:17276 ProteinModelPortal:H0Y4B0 SMR:H0Y4B0
PRIDE:H0Y4B0 Ensembl:ENST00000456170 Bgee:H0Y4B0 Uniprot:H0Y4B0
Length = 204
Score = 168 (64.2 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP+L ++ +TM FH +V+P + + + G + + D +
Sbjct: 3 EIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTPFCTELTG---IIQAMVDGQPSLQ 57
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ + W+ + L + ++ F TCG+WDLK +P QC+ + + YF +WI
Sbjct: 58 QVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWI 112
Query: 247 NLK 249
NLK
Sbjct: 113 NLK 115
Score = 66 (28.3 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
G++ M K + G H GIDD KNI +++ + G
Sbjct: 157 GLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 194
>UNIPROTKB|G3MZQ7 [details] [associations]
symbol:ERI1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02070439
Ensembl:ENSBTAT00000064195 OMA:PQLSKFC Uniprot:G3MZQ7
Length = 349
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 53/184 (28%), Positives = 102/184 (55%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EF V++++ T+ D F ++VRP +++ Q ++ + G D+V D A F
Sbjct: 150 EIIEFSVVLLNTHTLEIEDTFQQYVRP-EINTQ-LSDFCINLTG-ITQDQV--DKADTFP 204
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ W+ L K + + T G+WD+ + QC++S++K PP+ +WI
Sbjct: 205 QVLKKVIDWMKLKELGTK------YKYSILTDGSWDMSKFLNIQCQLSRLKYPPFAKKWI 258
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
+++ + NFYK +S+ + M++ + G H G+DD+KN+ R+ RML DG ++
Sbjct: 259 SIQKSYGNFYKVPRSQIK-LTIMLEKLGMDYDGWPHSGLDDSKNVARIAVRMLQDGCELR 317
Query: 307 ITAR 310
+ +
Sbjct: 318 VNEK 321
>UNIPROTKB|E1BVJ4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:PFLLPSW
EMBL:AADN02064630 IPI:IPI00578773 ProteinModelPortal:E1BVJ4
Ensembl:ENSGALT00000003470 Uniprot:E1BVJ4
Length = 241
Score = 204 (76.9 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 67/214 (31%), Positives = 99/214 (46%)
Query: 113 DLDFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ DF LVLD E + EI+EFP ++++A T FH FV+P EQ +
Sbjct: 31 EFDFLLVLDFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHTFVQPQ---EQPVLS 87
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG--RGG--HLKRAA 214
E GV + D +P + QF WL IQ L+ R K
Sbjct: 88 --EFCTTLTGVTQKQVDEGVPLHICLSQFLKWLQEIQKEKKILFSSDIPRNAIPEAKLCT 145
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
F T +WDL + +CK Q+ P F WI+LK + FY RK + G+ G ++
Sbjct: 146 FVTWTDWDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYN-RKPK--GLSGALQYVG 202
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ G H G+DD++N R+ R++ DG ++IT
Sbjct: 203 LAFVGREHSGLDDSRNTARLAWRLICDGCVLKIT 236
>UNIPROTKB|F1P8R6 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OMA:ALDCLPM EMBL:AAEX03004472 Ensembl:ENSCAFT00000028477
Uniprot:F1P8R6
Length = 658
Score = 210 (79.0 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 64/234 (27%), Positives = 109/234 (46%)
Query: 109 KCSQDLDFFLVLDLE------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E GK EI+EFP ++++ T FH +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHQSQEIVEFPAVLLNTSTGEIESEFHAYVQP----Q 84
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
+H E G+ + D +P + + QF W+ IQ ++ G
Sbjct: 85 EH-PVLSEFCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSNSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N + L
Sbjct: 201 LQEVGIEFLGQEHSGLDDSRNTAMLAWKMIRDGCLMKITRSLNKVPTKKNSRIL 254
>ZFIN|ZDB-GENE-050522-292 [details] [associations]
symbol:zgc:111991 "zgc:111991" species:7955 "Danio
rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
ZFIN:ZDB-GENE-050522-292 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:BC095637 IPI:IPI00607271 RefSeq:NP_001018476.1
UniGene:Dr.89386 HSSP:Q8IV48 ProteinModelPortal:Q502M8 PRIDE:Q502M8
GeneID:553667 KEGG:dre:553667 eggNOG:NOG304111 InParanoid:Q502M8
OrthoDB:EOG4F1X2H NextBio:20880400 Uniprot:Q502M8
Length = 555
Score = 200 (75.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 59/217 (27%), Positives = 100/217 (46%)
Query: 110 CSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
C Q F +++D E EI+EFP +++ + A FH +V+P +
Sbjct: 28 CKQRFSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQERPV-- 85
Query: 161 INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH-----LWEK-GRGGHLKR 212
++ + G D+V D+A P V+ +F WL +Q L + G +
Sbjct: 86 LSAFCTELTG-ITQDQV--DSAPPLHVVLSRFSRWLRSLQEERGVVFLTDSSGAAPSAQL 142
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKN 272
AF T +WDL + +CK Q+ +P WI+L+ + FY RK + G+ G + +
Sbjct: 143 CAFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYN-RKPK--GLRGALLD 199
Query: 273 RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
+ G H G+ D +N + QRM+ DG ++ IT+
Sbjct: 200 LGIEFTGREHSGLVDARNTALLAQRMMTDGCQLSITS 236
>UNIPROTKB|A8K979 [details] [associations]
symbol:ERI2 "ERI1 exoribonuclease 2" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
GO:GO:0046872 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
EMBL:AC004381 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 OrthoDB:EOG4F1X2H EMBL:AK127391
EMBL:AK292594 EMBL:BC010503 EMBL:AB040937 IPI:IPI00027086
IPI:IPI00444503 IPI:IPI00555642 IPI:IPI00872685
RefSeq:NP_001136197.1 RefSeq:NP_542394.2 UniGene:Hs.248437
ProteinModelPortal:A8K979 SMR:A8K979 STRING:A8K979
PhosphoSite:A8K979 PRIDE:A8K979 DNASU:112479
Ensembl:ENST00000300005 Ensembl:ENST00000357967
Ensembl:ENST00000389345 Ensembl:ENST00000563117
Ensembl:ENST00000564349 Ensembl:ENST00000569729 GeneID:112479
KEGG:hsa:112479 UCSC:uc002dhs.3 UCSC:uc002dht.3 UCSC:uc002dhu.1
CTD:112479 GeneCards:GC16M020791 HGNC:HGNC:30541 HPA:HPA035384
neXtProt:NX_A8K979 PharmGKB:PA164719245 HOGENOM:HOG000112417
HOVERGEN:HBG097018 InParanoid:A8K979 OMA:PFLLPSW GenomeRNAi:112479
NextBio:78594 Bgee:A8K979 CleanEx:HS_ERI2 Genevestigator:A8K979
Uniprot:A8K979
Length = 691
Score = 200 (75.5 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 62/234 (26%), Positives = 108/234 (46%)
Query: 109 KCSQDLDFFLVLDLE------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E GK EI+EFP ++++ T F +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQE--H 86
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
++++ G+ + D +P K + QF W+ IQ ++ G
Sbjct: 87 PILSEFC---MELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKKNFSIL 254
>UNIPROTKB|F1ML00 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR012337
SMART:SM00479 Pfam:PF00929 GO:GO:0003676 GO:GO:0005622
GO:GO:0004527 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 UniGene:Bt.5101 EMBL:DAAA02009029
EMBL:DAAA02009030 IPI:IPI00903627 ProteinModelPortal:F1ML00
SMR:F1ML00 Ensembl:ENSBTAT00000034295 ArrayExpress:F1ML00
Uniprot:F1ML00
Length = 160
Score = 174 (66.3 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC+
Sbjct: 28 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDLKVMLPGQCQ 82
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNIT 292
+ + YF +WINLK Y+F + G++ M K + G H GIDD KNI
Sbjct: 83 YLGLPVADYFKQWINLKKA-YSFAMGCWPK-NGLLDMNKGLSLQHIGRPHSGIDDCKNIA 140
Query: 293 RVLQRMLADG 302
+++ + G
Sbjct: 141 NIMKTLAYRG 150
>UNIPROTKB|B4DEX5 [details] [associations]
symbol:ERI3 "Prion protein interacting protein, isoform
CRA_d" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR006055 InterPro:IPR012337 SMART:SM00479 Pfam:PF00929
EMBL:CH471059 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 EMBL:AL035417
HOGENOM:HOG000218353 EMBL:AL390776 IPI:IPI00644349
UniGene:Hs.731413 HGNC:HGNC:17276 EMBL:AK293833 SMR:B4DEX5
STRING:B4DEX5 Ensembl:ENST00000537474 UCSC:uc010okv.2
HOVERGEN:HBG058704 Uniprot:B4DEX5
Length = 160
Score = 174 (66.3 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC+
Sbjct: 28 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDLKVMLPGQCQ 82
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNIT 292
+ + YF +WINLK Y+F + G++ M K + G H GIDD KNI
Sbjct: 83 YLGLPVADYFKQWINLKKA-YSFAMGCWPK-NGLLDMNKGLSLQHIGRPHSGIDDCKNIA 140
Query: 293 RVLQRMLADG 302
+++ + G
Sbjct: 141 NIMKTLAYRG 150
>MGI|MGI:1918401 [details] [associations]
symbol:Eri2 "exoribonuclease 2" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
MGI:MGI:1918401 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 GO:GO:0004527 GO:GO:0090305 InterPro:IPR013520
SUPFAM:SSF53098 eggNOG:COG5018 GeneTree:ENSGT00530000063205
HSSP:Q8IV48 CTD:112479 HOVERGEN:HBG097018 EMBL:AK029056
EMBL:AK135821 EMBL:AK160698 EMBL:AK165163 EMBL:BC090961
IPI:IPI00404329 RefSeq:NP_081974.3 UniGene:Mm.274160
ProteinModelPortal:Q5BKS4 SMR:Q5BKS4 PhosphoSite:Q5BKS4
PRIDE:Q5BKS4 Ensembl:ENSMUST00000150844 GeneID:71151 KEGG:mmu:71151
UCSC:uc009jlu.2 InParanoid:Q5BKS4 NextBio:333139 Bgee:Q5BKS4
Genevestigator:Q5BKS4 Uniprot:Q5BKS4
Length = 688
Score = 195 (73.7 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 53/197 (26%), Positives = 95/197 (48%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ T FH +V+P + ++++ G + +V D +P K
Sbjct: 57 EIIEFPAVLLNTATGEIESEFHAYVQPQE--HPILSEFCTELTG---IKQVQVDEGVPLK 111
Query: 187 EVIQQFEAWLIQHHLWEK-----GRG------GHLKRAAFATCGNWDLKTKVPDQCKVSQ 235
+ QF W+ H L ++ G +K AF T +WDL + +C+ Q
Sbjct: 112 ICLSQFCKWI--HKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQ 169
Query: 236 IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVL 295
+ P + WI+L+ + FYK RK + G+ G ++ + G H G+DD++N +
Sbjct: 170 LLKPVFLNSWIDLRATYRLFYK-RKPK--GLSGALQEVGIEFSGREHSGLDDSRNTALLA 226
Query: 296 QRMLADGARVQITARRN 312
+M+ DG ++IT N
Sbjct: 227 WKMIRDGCLMKITRSLN 243
>UNIPROTKB|E1BJE4 [details] [associations]
symbol:ERI2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 Pfam:PF00929 GO:GO:0008270
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 EMBL:DAAA02057647 IPI:IPI00687052
ProteinModelPortal:E1BJE4 Ensembl:ENSBTAT00000008456 OMA:ALDCLPM
Uniprot:E1BJE4
Length = 689
Score = 195 (73.7 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 60/235 (25%), Positives = 111/235 (47%)
Query: 109 KCSQDLDFFLVLDLE------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +++D E GK E++EFP ++++ T FH +V+P +
Sbjct: 29 KSKQLFDYLIIIDFESTCWNDGKRHRSQEVVEFPAVLLNTSTGEIESEFHAYVQPQE--H 86
Query: 159 QHINKY-IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKGRG----G 208
++++ +E G+ + D +P K + QF W+ IQ ++
Sbjct: 87 PILSEFCVE----LTGIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSDISTS 142
Query: 209 HLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMG 268
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 143 EVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK--GLSG 199
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDS-RNVQYLF 322
++ + G H G+DD++N + +M+ DG ++IT N S + + +F
Sbjct: 200 ALQEVGMQFLGREHFGLDDSRNTALLAWKMIRDGCLMKITRSLNKVSTKRIPNIF 254
>UNIPROTKB|F6QUN3 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI00943355 ProteinModelPortal:F6QUN3 SMR:F6QUN3
Ensembl:ENST00000452396 ArrayExpress:F6QUN3 Bgee:F6QUN3
Uniprot:F6QUN3
Length = 176
Score = 172 (65.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 37/129 (28%), Positives = 67/129 (51%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP+L ++ +TM FH +V+P + + + G + + D +
Sbjct: 46 EIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTPFCTELTG---IIQAMVDGQPSLQ 100
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ + W+ + L + ++ F TCG+WDLK +P QC+ + + YF +WI
Sbjct: 101 QVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWI 155
Query: 247 NLKDVFYNF 255
NLK Y+F
Sbjct: 156 NLKKA-YSF 163
>RGD|1583889 [details] [associations]
symbol:Eri2 "ERI1 exoribonuclease family member 2" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR006055 InterPro:IPR010666
InterPro:IPR012337 Pfam:PF06839 SMART:SM00479 Pfam:PF00929
RGD:1583889 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 GO:GO:0004527
InterPro:IPR013520 SUPFAM:SSF53098 GeneTree:ENSGT00530000063205
OrthoDB:EOG4F1X2H CTD:112479 OMA:ALDCLPM IPI:IPI00958369
RefSeq:NP_001178043.1 UniGene:Rn.198513 ProteinModelPortal:D4A625
Ensembl:ENSRNOT00000019747 GeneID:691484 KEGG:rno:691484
UCSC:RGD:1583889 NextBio:743149 Uniprot:D4A625
Length = 687
Score = 194 (73.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 59/219 (26%), Positives = 104/219 (47%)
Query: 115 DFFLVLDLE------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ +V+D E GK EI+EFP ++++ T FH +V+P + ++++
Sbjct: 35 DYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQPQE--HPILSEF 92
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----GG------HLKRA 213
G + +V D +P K + QF W+ H L ++ + G +K
Sbjct: 93 CTELTG---IKQVQVDEGVPLKICLSQFCKWI--HKLQQQKKISFATGDSEPSTPEVKPC 147
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR 273
AF T +WDL + +CK Q+ P + WI+L+ + FY RK + G+ G ++
Sbjct: 148 AFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYN-RKPK--GLSGALQEV 204
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+ G H G+DD++N + +M+ DG ++IT N
Sbjct: 205 GIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLN 243
>WB|WBGene00000797 [details] [associations]
symbol:crn-4 species:6239 "Caenorhabditis elegans"
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0006309 "apoptotic DNA fragmentation"
evidence=IGI;IDA] [GO:0008408 "3'-5' exonuclease activity"
evidence=ISS;IDA] [GO:0004520 "endodeoxyribonuclease activity"
evidence=IDA] [GO:0004540 "ribonuclease activity" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0000737
"DNA catabolic process, endonucleolytic" evidence=IDA] [GO:0000738
"DNA catabolic process, exonucleolytic" evidence=IDA] [GO:0006401
"RNA catabolic process" evidence=IDA] [GO:0004536
"deoxyribonuclease activity" evidence=IDA] InterPro:IPR006055
InterPro:IPR012337 SMART:SM00479 Pfam:PF00929 GO:GO:0005622
GO:GO:0006401 GO:GO:0003697 InterPro:IPR013520 SUPFAM:SSF53098
GO:GO:0006309 GO:GO:0004540 GO:GO:0008408 GO:GO:0004520
EMBL:AY303578 EMBL:FO080097 PIR:T30086 RefSeq:NP_508415.1
UniGene:Cel.11543 PDB:3CG7 PDB:3CM5 PDB:3CM6 PDBsum:3CG7
PDBsum:3CM5 PDBsum:3CM6 ProteinModelPortal:Q10905 SMR:Q10905
STRING:Q10905 PaxDb:Q10905 EnsemblMetazoa:AH9.2 GeneID:180536
KEGG:cel:CELE_AH9.2 UCSC:AH9.2 CTD:180536 WormBase:AH9.2
eggNOG:COG5018 GeneTree:ENSGT00530000063205 HOGENOM:HOG000016569
InParanoid:Q10905 OMA:DLWRIAQ EvolutionaryTrace:Q10905
NextBio:909784 GO:GO:0000738 Uniprot:Q10905
Length = 298
Score = 180 (68.4 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 66/217 (30%), Positives = 103/217 (47%)
Query: 105 AFQHKCSQD----LDFFLVLDLEGK---IEILEFPVLMIDAKTMAF-VDL-FHRFVRPSK 155
A+QH C D LDF D + E+++F ++ D D+ F+++V+P
Sbjct: 2 AYQH-CPFDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPV- 59
Query: 156 MSEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
+N+ + F G+ + DTA F V +QF+ WLI L E+G+ A
Sbjct: 60 -----LNRTLTKNCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGL-EEGK------FA 107
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMK 271
F DL Q K+S I++P +F ++INL +F N P++ AT +G M
Sbjct: 108 FVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMN 167
Query: 272 NR-QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQI 307
+P G H +DD NI +LQRM+ GA+V +
Sbjct: 168 EYYDLPTIGRAHDAMDDCLNIATILQRMINMGAKVTV 204
>WB|WBGene00001332 [details] [associations]
symbol:eri-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0045132 "meiotic chromosome
segregation" evidence=IMP] [GO:0048609 "multicellular organismal
reproductive process" evidence=IMP] [GO:0006401 "RNA catabolic
process" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000175 "3'-5'-exoribonuclease activity" evidence=IMP;IDA]
[GO:0000467 "exonucleolytic trimming to generate mature 3'-end of
5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP;IDA] [GO:0007281 "germ cell development"
evidence=IGI;IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 Pfam:PF02037 PROSITE:PS50800 SMART:SM00479
SMART:SM00513 Pfam:PF00929 GO:GO:0005737 GO:GO:0008406
GO:GO:0002119 GO:GO:0016246 GO:GO:0003676 GO:GO:0003723
GO:GO:0006401 GO:GO:0009790 GO:GO:0048609 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0045132 GO:GO:0000175 eggNOG:COG5018
GeneTree:ENSGT00530000063205 GO:GO:0000467 EMBL:FO081716 PIR:T32575
PIR:T32576 RefSeq:NP_741292.1 RefSeq:NP_741293.1
ProteinModelPortal:O44406 SMR:O44406 IntAct:O44406 STRING:O44406
PaxDb:O44406 PRIDE:O44406 EnsemblMetazoa:T07A9.5b GeneID:176868
KEGG:cel:CELE_T07A9.5 UCSC:T07A9.5b CTD:176868 WormBase:T07A9.5a
WormBase:T07A9.5b HOGENOM:HOG000020044 InParanoid:O44406
OMA:LIDVREM NextBio:894366 Uniprot:O44406
Length = 582
Score = 185 (70.2 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/175 (26%), Positives = 89/175 (50%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+E P ++ID + M + F +VRP + + ++++ ++ K + V D A F+
Sbjct: 170 EIIELPAVLIDVREMKIISEFRTYVRPVRNPK--LSEFCM-QFTKIAQETV--DAAPYFR 224
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
E +Q+ W+ + +L +K R AF T G D+ + QC +S I++P F +I
Sbjct: 225 EALQRLYTWMRKFNLGQKN-----SRFAFVTDGPHDMWKFMQFQCLLSNIRMPHMFRSFI 279
Query: 247 NLKDVFYNFYKP--RKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRML 299
N+K F + + + +G+ M++ + G+ H G+DD NI + +M+
Sbjct: 280 NIKKTFKEKFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIAAIAIQMM 334
>POMBASE|SPBC30B4.08 [details] [associations]
symbol:eri1 "double-strand siRNA ribonuclease Eri1"
species:4896 "Schizosaccharomyces pombe" [GO:0000175
"3'-5'-exoribonuclease activity" evidence=IMP] [GO:0000467
"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0032296 "double-stranded RNA-specific ribonuclease activity"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060906 "negative regulation of chromatin silencing by small
RNA" evidence=IMP] InterPro:IPR003034 InterPro:IPR006055
InterPro:IPR012337 PROSITE:PS50800 SMART:SM00479 Pfam:PF00929
PomBase:SPBC30B4.08 GO:GO:0005829 GO:GO:0046872 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0003723 InterPro:IPR013520
SUPFAM:SSF53098 GO:GO:0031047 GO:GO:0000175 eggNOG:COG5018
EMBL:AB004539 GO:GO:0000467 RefSeq:XP_001713129.1
ProteinModelPortal:Q08I43 EnsemblFungi:SPBC30B4.08.1 GeneID:2540347
KEGG:spo:SPBC30B4.08 OMA:HETIELP OrthoDB:EOG45MRFR NextBio:20801475
GO:GO:0032296 GO:GO:0060906 Uniprot:Q08I43
Length = 313
Score = 154 (59.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/196 (24%), Positives = 98/196 (50%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+E P L+ D + +D FH +VRPS M+ ++ Y + G + + D A F
Sbjct: 102 EIIELPCLLFDLIEKSIIDEFHSYVRPS-MNPT-LSDYCKSLTG---IQQCTVDKAPIFS 156
Query: 187 EVIQQFEAWLIQH-----------HLWEKGRG---GHLKRAAFATCGNWDLKTKVPDQCK 232
+V+++ +L +H + E + K A+A G WD+ + + Q K
Sbjct: 157 DVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWAWACDGPWDMASFLAKQFK 216
Query: 233 VSQIKLPPYFM-EWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
++ +P + +++++ + + Y+ PR T + GM+++ + GS H GIDD +N
Sbjct: 217 YDKMPIPDWIKGPFVDIRSFYKDVYRVPR----TNINGMLEHWGLQFEGSEHRGIDDARN 272
Query: 291 ITRVLQRMLADGARVQ 306
++R++++M ++ +
Sbjct: 273 LSRIVKKMCSENVEFE 288
>UNIPROTKB|F6UGJ8 [details] [associations]
symbol:ERI3 "ERI1 exoribonuclease 3" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 EMBL:AL035417 EMBL:AL390776 HGNC:HGNC:17276
IPI:IPI01011710 ProteinModelPortal:F6UGJ8 SMR:F6UGJ8
Ensembl:ENST00000457571 ArrayExpress:F6UGJ8 Bgee:F6UGJ8
Uniprot:F6UGJ8
Length = 250
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 139 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 196
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 197 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 248
Query: 224 K 224
K
Sbjct: 249 K 249
>UNIPROTKB|F1S331 [details] [associations]
symbol:ERI3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 OMA:FPALTEH
EMBL:CU929772 Ensembl:ENSSSCT00000004352 Uniprot:F1S331
Length = 252
Score = 116 (45.9 bits), Expect = 0.00016, P = 0.00016
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 K 224
K
Sbjct: 251 K 251
>RGD|1595859 [details] [associations]
symbol:Eri3 "ERI1 exoribonuclease family member 3" species:10116
"Rattus norvegicus" [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR012337 Pfam:PF00929 RGD:1595859
GO:GO:0003676 InterPro:IPR013520 SUPFAM:SSF53098
GeneTree:ENSGT00530000063205 OrthoDB:EOG4ZKJMJ IPI:IPI00769247
ProteinModelPortal:D4AA56 Ensembl:ENSRNOT00000026222
UCSC:RGD:1595859 Uniprot:D4AA56
Length = 253
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 K 224
K
Sbjct: 251 K 251
>UNIPROTKB|F1NBT2 [details] [associations]
symbol:F1NBT2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR012337 Pfam:PF00929 GO:GO:0003676 InterPro:IPR013520
SUPFAM:SSF53098 GeneTree:ENSGT00530000063205 EMBL:AADN02012702
IPI:IPI00601169 Ensembl:ENSGALT00000016435 OMA:ISXNISK
Uniprot:F1NBT2
Length = 222
Score = 113 (44.8 bits), Expect = 0.00025, P = 0.00025
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 110 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 167
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 168 FCTELTG---IIQGMVDGQPSLQQVLERVDEWMAKEGLLDPS-----VKSIFVTCGDWDL 219
Query: 224 K 224
K
Sbjct: 220 K 220
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 326 312 0.00080 116 3 11 22 0.45 33
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 620 (66 KB)
Total size of DFA: 251 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.02u 0.19s 24.21t Elapsed: 00:00:02
Total cpu time: 24.03u 0.19s 24.22t Elapsed: 00:00:02
Start: Tue May 21 01:53:07 2013 End: Tue May 21 01:53:09 2013