BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020417
(326 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461547|ref|XP_002282697.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140 [Vitis vinifera]
Length = 319
Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/327 (68%), Positives = 251/327 (76%), Gaps = 10/327 (3%)
Query: 1 MSFSKICLSRFAPLGSPNSLSAFPFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSSTHQ 60
M+F ++ R+ GS +SL + S T + IS + S S T
Sbjct: 1 MAFYRVSPFRY---GSLSSLIPYVSSPSSLSPPVRTFTLSASIS---TPHPSPPSLLTAS 54
Query: 61 KGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVL 120
AS RWRPMCLY+TQGKCT MDD HLE FNH+ SR+LQV+AA FQH SQ LDFFLVL
Sbjct: 55 PKASDRWRPMCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVL 114
Query: 121 DLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHD 180
DLEGKIEILEFPVLMI+AKTM VDLFHRFVRPS+MSEQ IN+YIEGKYGK GVDRVWHD
Sbjct: 115 DLEGKIEILEFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDRVWHD 174
Query: 181 TALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
T++PFKEVIQQFEAWL QHHLW K GG L +AAF TCGNWDLKTKVP QCKVS++KLPP
Sbjct: 175 TSIPFKEVIQQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLKTKVPQQCKVSKMKLPP 234
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YFMEWINLKDV+ NFYK R ATGMM MMK Q+P+ GSHHLGIDDTKNI RVLQRMLA
Sbjct: 235 YFMEWINLKDVYLNFYKRR---ATGMMTMMKELQIPLLGSHHLGIDDTKNIARVLQRMLA 291
Query: 301 DGARVQITARRNPDS-RNVQYLFEDRI 326
DGA +QITARRN DS NV++LF++RI
Sbjct: 292 DGALLQITARRNADSPENVEFLFKNRI 318
>gi|302142955|emb|CBI20250.3| unnamed protein product [Vitis vinifera]
Length = 256
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/258 (78%), Positives = 223/258 (86%), Gaps = 4/258 (1%)
Query: 70 MCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEIL 129
MCLY+TQGKCT MDD HLE FNH+ SR+LQV+AA FQH SQ LDFFLVLDLEGKIEIL
Sbjct: 1 MCLYYTQGKCTKMDDPTHLETFNHNCSRELQVNAANFQHLQSQHLDFFLVLDLEGKIEIL 60
Query: 130 EFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVI 189
EFPVLMI+AKTM VDLFHRFVRPS+MSEQ IN+YIEGKYGK GVDRVWHDT++PFKEVI
Sbjct: 61 EFPVLMINAKTMDVVDLFHRFVRPSEMSEQRINEYIEGKYGKLGVDRVWHDTSIPFKEVI 120
Query: 190 QQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLK 249
QQFEAWL QHHLW K GG L +AAF TCGNWDLKTKVP QCKVS++KLPPYFMEWINLK
Sbjct: 121 QQFEAWLTQHHLWTKEMGGRLDQAAFVTCGNWDLKTKVPQQCKVSKMKLPPYFMEWINLK 180
Query: 250 DVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
DV+ NFYK R ATGMM MMK Q+P+ GSHHLGIDDTKNI RVLQRMLADGA +QITA
Sbjct: 181 DVYLNFYKRR---ATGMMTMMKELQIPLLGSHHLGIDDTKNIARVLQRMLADGALLQITA 237
Query: 310 RRNPDS-RNVQYLFEDRI 326
RRN DS NV++LF++RI
Sbjct: 238 RRNADSPENVEFLFKNRI 255
>gi|255564549|ref|XP_002523270.1| exonuclease, putative [Ricinus communis]
gi|223537483|gb|EEF39109.1| exonuclease, putative [Ricinus communis]
Length = 329
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 196/264 (74%), Positives = 220/264 (83%), Gaps = 2/264 (0%)
Query: 64 STRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLE 123
+ RW+PMCLYFT GKCT MDD HLE FNHD SRDL V+AA F+ K QD +FFLV DLE
Sbjct: 67 TYRWKPMCLYFTHGKCTKMDDPTHLEVFNHDCSRDLPVNAADFKRKRPQDFEFFLVFDLE 126
Query: 124 GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
GK+EILEFPVL+IDAKTMAFVDLFHRFVRPS MSEQ IN+YIE KYGKFGVDRVWHDTAL
Sbjct: 127 GKVEILEFPVLIIDAKTMAFVDLFHRFVRPSAMSEQRINEYIENKYGKFGVDRVWHDTAL 186
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
PF EVIQ+FEAWL HHLWEK GGHL RAAF TCGNWD+KT++P QC VS+IKLP YFM
Sbjct: 187 PFNEVIQEFEAWLTHHHLWEKKHGGHLNRAAFVTCGNWDVKTQIPRQCTVSKIKLPRYFM 246
Query: 244 EWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGA 303
EWINLKDV+ NFY P K EA GM MM+ ++PM GSHHLGIDDTKN+ R+LQRMLADGA
Sbjct: 247 EWINLKDVYQNFYNP-KQEARGMRTMMQQLKIPMLGSHHLGIDDTKNVARILQRMLADGA 305
Query: 304 RVQITARRNPDS-RNVQYLFEDRI 326
+ ITA RNPDS NV +L+++RI
Sbjct: 306 VIPITAWRNPDSIGNVNFLYKNRI 329
>gi|224115354|ref|XP_002317011.1| predicted protein [Populus trichocarpa]
gi|222860076|gb|EEE97623.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 66 RWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGK 125
RW+PMCLY T GKCT +DD +H+E+FNHD SRD QV AA F+ K QD DFFLV DLEGK
Sbjct: 1 RWKPMCLYHTHGKCTKIDDPVHVERFNHDCSRDFQVSAADFERKRPQDFDFFLVFDLEGK 60
Query: 126 IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPF 185
+EILEFPVL+IDAKTM VDLFHRFVRP+ MSE+ +N+YI KYGKFGVDRVWHDTALPF
Sbjct: 61 VEILEFPVLIIDAKTMGVVDLFHRFVRPTAMSEERVNEYIYNKYGKFGVDRVWHDTALPF 120
Query: 186 KEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEW 245
EV+QQFE+WL QH+LWEK RGG L RAAF TCGNWD+KT+VP QC VS++KLPPYFMEW
Sbjct: 121 NEVLQQFESWLTQHNLWEKTRGGRLNRAAFVTCGNWDVKTQVPHQCSVSKLKLPPYFMEW 180
Query: 246 INLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARV 305
INLKDV+ NFY PR +EA GM MM ++PM GSHHLG+DDTKNI RVL RMLADGA +
Sbjct: 181 INLKDVYQNFYNPR-NEARGMRTMMSQLKIPMVGSHHLGLDDTKNIARVLLRMLADGAVL 239
Query: 306 QITARRNPDS-RNVQYLFEDRI 326
ITARR P+S +V +L+++RI
Sbjct: 240 PITARRKPESPGSVNFLYKNRI 261
>gi|357516489|ref|XP_003628533.1| Exonuclease domain-containing protein, putative [Medicago
truncatula]
gi|355522555|gb|AET03009.1| Exonuclease domain-containing protein, putative [Medicago
truncatula]
Length = 308
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/265 (70%), Positives = 220/265 (83%), Gaps = 7/265 (2%)
Query: 63 ASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDL 122
+++R +PMCLY TQGKCTMMDD++HL+KFNHD S++LQV+ A SQ+ DFFLVLDL
Sbjct: 50 STSRSKPMCLYHTQGKCTMMDDLVHLDKFNHDCSKELQVNIAGLSKVHSQNHDFFLVLDL 109
Query: 123 EGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTA 182
EGK+EILEFPVL I AKT+ D+FHRFVRPS MSEQ IN+YIEGKYGK GVDRVWHDTA
Sbjct: 110 EGKVEILEFPVLKISAKTLKVEDIFHRFVRPSNMSEQRINEYIEGKYGKIGVDRVWHDTA 169
Query: 183 LPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF 242
+PFKEVI++FEAWL+Q LW GG+L RAAF TCGNWDLKTKVP QC+VS+IK+PPYF
Sbjct: 170 IPFKEVIEEFEAWLVQQKLWT---GGNLDRAAFVTCGNWDLKTKVPQQCEVSRIKVPPYF 226
Query: 243 MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
MEWINLKD++ NFY R ATGM+ MMK Q+P+ GSHHLGIDDTKNITRVLQ ML DG
Sbjct: 227 MEWINLKDIYLNFYNRR---ATGMVTMMKELQMPLVGSHHLGIDDTKNITRVLQHMLVDG 283
Query: 303 ARVQITARRNPDS-RNVQYLFEDRI 326
A +QITARRNP S R V +LF++RI
Sbjct: 284 ALIQITARRNPKSLREVSFLFKNRI 308
>gi|449456609|ref|XP_004146041.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Cucumis sativus]
gi|449510343|ref|XP_004163638.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Cucumis sativus]
Length = 325
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/265 (68%), Positives = 219/265 (82%), Gaps = 4/265 (1%)
Query: 63 ASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDL 122
A RWRP CLYFT G+CTMMDD +H++KFNHDISR+LQVD A H +QD D+FLVLDL
Sbjct: 64 ADNRWRPTCLYFTHGRCTMMDDPLHIKKFNHDISRELQVDVARSNHMRTQDFDYFLVLDL 123
Query: 123 EGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTA 182
EGK+EI+EFPV++++AKTM FHRFVRPS+MSEQ IN+YIEGKYGKFGVDRVWHDTA
Sbjct: 124 EGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTA 183
Query: 183 LPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF 242
+ +K+VIQQFE WL+QH LW K GG L RAAF TCGNWD+KT+VP QC VS++KLP YF
Sbjct: 184 ILYKDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCSVSKMKLPDYF 243
Query: 243 MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
MEWIN+KDV+ NFY +ATGM MM+ ++P+ GSHHLGIDDTKNI RVLQRM+ DG
Sbjct: 244 MEWINIKDVYLNFY---TKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG 300
Query: 303 ARVQITARRNPDS-RNVQYLFEDRI 326
A +Q+TARRNP S ++V++LFE+RI
Sbjct: 301 AHLQVTARRNPKSPQHVKFLFENRI 325
>gi|195621024|gb|ACG32342.1| histone mRNA exonuclease 1 [Zea mays]
Length = 330
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/332 (56%), Positives = 243/332 (73%), Gaps = 9/332 (2%)
Query: 1 MSFSKICLSRFAPLGSPNSLSAF-PFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSSTH 59
M+ +++ S A L P S F PFS P+ + + + + S ++ S+ ++
Sbjct: 1 MALARVSPSSLANLIPPLLQSFFRPFSSDFPIRNSRRRSSPVAAAFSLTSQSAHAAREGL 60
Query: 60 QKGA---STR--WRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDL 114
A S+R W+P CLY+TQGKCTMM+D MHLEKF+H++ DL V+A+A Q L
Sbjct: 61 VMEAPRPSSRYPWKPTCLYYTQGKCTMMNDAMHLEKFSHNLKMDLPVNASATDKSKPQKL 120
Query: 115 DFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGV 174
++ L+LDLEGK+EILEFPV+MIDA+ FVD FHRFVRP+ MSEQ +YIEGKYGKFGV
Sbjct: 121 EYLLILDLEGKVEILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEYIEGKYGKFGV 180
Query: 175 DRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVS 234
DRVWHDTA PFK+V+Q+FE WL H+LW+K +GG L R AF TCGNWDLKTKVP+QCKVS
Sbjct: 181 DRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCGNWDLKTKVPEQCKVS 240
Query: 235 QIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRV 294
+I LP YFMEWINLKD++ NFY R ATGMM MM+ Q+P+ G+HHLGIDD+KNI RV
Sbjct: 241 KINLPTYFMEWINLKDIYLNFYNRR---ATGMMTMMRELQLPIVGNHHLGIDDSKNIARV 297
Query: 295 LQRMLADGARVQITARRNPDSRNVQYLFEDRI 326
+QRMLADGA +QITA+R + +V++LF+DRI
Sbjct: 298 VQRMLADGAVIQITAKRQSATGDVRFLFKDRI 329
>gi|356517082|ref|XP_003527219.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Glycine max]
Length = 299
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/300 (66%), Positives = 234/300 (78%), Gaps = 11/300 (3%)
Query: 30 PLT-RAHKLTCAQHISCSCSAS-SSSSSSSTHQKGASTRWRPMCLYFTQGKCTMMDDVMH 87
PLT A+ L+ +Q S + SAS S+S + S+H+ R +PMCLY +QGKCT MDD +H
Sbjct: 7 PLTMHANYLSHSQTHSLTLSASLSTSEAPSSHE--PHFRRKPMCLYHSQGKCTKMDDPIH 64
Query: 88 LEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLF 147
LE FNHD R+L V+ A SQDLDFFLVLDLEG++EILEFPVLMI AKT+ D+F
Sbjct: 65 LETFNHDCFRELLVNTAELNKIRSQDLDFFLVLDLEGRVEILEFPVLMISAKTLQVEDIF 124
Query: 148 HRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG 207
HRFVRPSKMSE+ IN+Y+EGKYGKFGV RVWHDTA+PF +VIQQF WL++H LW G
Sbjct: 125 HRFVRPSKMSERRINEYVEGKYGKFGVHRVWHDTAIPFTDVIQQFGTWLMRHQLW---MG 181
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
L RAAF TCGNWDLKTKVP QC+VS+I+LPPYFMEWINLKDV+ NFY R ATGM+
Sbjct: 182 EKLIRAAFVTCGNWDLKTKVPQQCEVSKIELPPYFMEWINLKDVYLNFYDRR---ATGMV 238
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDS-RNVQYLFEDRI 326
MMK Q+PM GSHHLGIDDT+NI RVLQ ML DGA VQITARRNP S R+V++LF++RI
Sbjct: 239 TMMKELQIPMVGSHHLGIDDTRNIARVLQHMLLDGALVQITARRNPRSLRDVKFLFKNRI 298
>gi|212722758|ref|NP_001131746.1| uncharacterized protein LOC100193112 [Zea mays]
gi|194692414|gb|ACF80291.1| unknown [Zea mays]
gi|413944431|gb|AFW77080.1| histone mRNA exonuclease 1 [Zea mays]
Length = 330
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/332 (56%), Positives = 243/332 (73%), Gaps = 9/332 (2%)
Query: 1 MSFSKICLSRFAPLGSPNSLSAF-PFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSSTH 59
M+ +++ S A L P S F PFS P+ + + + + S ++ S+ ++
Sbjct: 1 MALARVSPSSLANLIPPLLQSFFRPFSSDFPIRNSRRRSSPVAAAFSLTSQSAHAAREGL 60
Query: 60 QKGA---STR--WRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDL 114
A S+R W+P CLY+TQGKCTMM+D MHLEKF+H++ DL V+A+A Q L
Sbjct: 61 VMEAPRPSSRYPWKPTCLYYTQGKCTMMNDAMHLEKFSHNLKMDLPVNASATDKSKPQKL 120
Query: 115 DFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGV 174
++ L+LDLEG++EILEFPV+MIDA+ FVD FHRFVRP+ MSEQ +YIEGKYGKFGV
Sbjct: 121 EYLLILDLEGRVEILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEYIEGKYGKFGV 180
Query: 175 DRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVS 234
DRVWHDTA PFK+V+Q+FE WL H+LW+K +GG L R AF TCGNWDLKTKVP+QCKVS
Sbjct: 181 DRVWHDTATPFKQVLQEFEDWLGNHNLWKKEQGGSLNRGAFVTCGNWDLKTKVPEQCKVS 240
Query: 235 QIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRV 294
+I LP YFMEWINLKD++ NFY R ATGMM MM+ Q+P+ G+HHLGIDD+KNI RV
Sbjct: 241 KINLPTYFMEWINLKDIYLNFYNRR---ATGMMTMMRELQLPIVGNHHLGIDDSKNIARV 297
Query: 295 LQRMLADGARVQITARRNPDSRNVQYLFEDRI 326
+QRMLADGA +QITA+R + +V++LF+DRI
Sbjct: 298 VQRMLADGAVIQITAKRQSATGDVRFLFKDRI 329
>gi|357145920|ref|XP_003573813.1| PREDICTED: uncharacterized exonuclease domain-containing protein
At3g15140-like [Brachypodium distachyon]
Length = 337
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/326 (57%), Positives = 235/326 (72%), Gaps = 12/326 (3%)
Query: 4 SKICLSRFAPLGSPNSLSAFPFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSSTHQKGA 63
S + S P + +S+SA FS P +S AS++ +
Sbjct: 20 SSMLHSFLRPFSTSSSISAPRFSHP------RSFPTDVGLSQDSFASTAREEGDVIEAPR 73
Query: 64 STR---WRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVL 120
ST W+PMCLY+TQGKCTMMDD HLEKFNH++ DL V+A+A Q LD+FLVL
Sbjct: 74 STSRRPWKPMCLYYTQGKCTMMDDTFHLEKFNHNLMMDLPVNASAADKVKPQKLDYFLVL 133
Query: 121 DLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHD 180
DLEGK+EILEFPV+MIDA +M FVD FHRFVRP+ MSEQ I +YI+GKYGKFGVDRVWHD
Sbjct: 134 DLEGKVEILEFPVVMIDAHSMEFVDSFHRFVRPTAMSEQRIREYIDGKYGKFGVDRVWHD 193
Query: 181 TALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
TA+PF EV+Q+FE W+ H LW++ +G L AAF TCGNWDLKTKVP+QCKVS++KLP
Sbjct: 194 TAIPFGEVLQEFEDWIGGHELWKQKQGESLNSAAFITCGNWDLKTKVPEQCKVSKLKLPS 253
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YFMEWINLKD++ NFY R ATGMM MM+ Q+P GSHHLGIDD KNI R++QRMLA
Sbjct: 254 YFMEWINLKDIYLNFYNRR---ATGMMTMMRELQIPTVGSHHLGIDDAKNIARIVQRMLA 310
Query: 301 DGARVQITARRNPDSRNVQYLFEDRI 326
DGA +QITA+R+ + +V++LF++RI
Sbjct: 311 DGAMIQITAKRHSATNDVEFLFKNRI 336
>gi|218198144|gb|EEC80571.1| hypothetical protein OsI_22899 [Oryza sativa Indica Group]
Length = 335
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/315 (60%), Positives = 234/315 (74%), Gaps = 15/315 (4%)
Query: 24 PFSLPVPLTRAHKLTCAQHISCSCSASSSSSSS--STHQKGA--------STR--WRPMC 71
PFS P + R H + +A+ S +S S GA S+R W+P C
Sbjct: 23 PFSSPSSVLRPRVTRVPHHRGFAIAAALSQASPLPSADGDGAVMEAPPRPSSRRPWKPTC 82
Query: 72 LYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEILEF 131
LY+TQGKCTM++D +HLEKFNH++S DL V+ +A SQ LD+FLVLDLEGK+EILEF
Sbjct: 83 LYYTQGKCTMLNDTLHLEKFNHNLSTDLPVNYSAADKVKSQKLDYFLVLDLEGKVEILEF 142
Query: 132 PVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQ 191
PV+MIDA++M FVD FHRFV P+ MSEQ I +YIEGKYGKFGVDRVWHDTA+PF EV+Q+
Sbjct: 143 PVVMIDAQSMEFVDSFHRFVHPTVMSEQRIREYIEGKYGKFGVDRVWHDTAIPFMEVLQE 202
Query: 192 FEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDV 251
FE W+ H W+K +GG L AAF TCGNWDLKTKVP+QC+VS+IKLP YFMEWINLKD+
Sbjct: 203 FEDWIEHHKFWKKEQGGALNSAAFITCGNWDLKTKVPEQCRVSKIKLPSYFMEWINLKDI 262
Query: 252 FYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARR 311
+ NFY R ATGMM MM+ Q+P+ GSHHLGIDD KNI RV+QRMLADGA +QITA+R
Sbjct: 263 YLNFYSRR---ATGMMTMMRELQMPIVGSHHLGIDDAKNIARVVQRMLADGAVMQITAKR 319
Query: 312 NPDSRNVQYLFEDRI 326
+ +V++LF++RI
Sbjct: 320 QSATGDVKFLFKNRI 334
>gi|222641267|gb|EEE69399.1| hypothetical protein OsJ_28756 [Oryza sativa Japonica Group]
Length = 335
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/337 (57%), Positives = 243/337 (72%), Gaps = 19/337 (5%)
Query: 6 ICLSRFAP--LGSPNSLSAF--PFSLPVPLTRAHKLTCAQHISCSCSASSSSSSS--STH 59
+ L+R +P SP + + PFS P + R H + +A+ S +S S
Sbjct: 1 MALARVSPPAFSSPFLIHSLLRPFSSPSSVLRPRVTRVPHHRGFAIAAALSQASPLPSAD 60
Query: 60 QKGA--------STR--WRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHK 109
GA S+R W+P CLY+TQGKCTM++D +HLEKFNH++ DL V+ +A
Sbjct: 61 GDGAVMEAPPRPSSRRPWKPTCLYYTQGKCTMLNDTLHLEKFNHNLPTDLPVNYSAADKV 120
Query: 110 CSQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKY 169
SQ LD+FLVLDLEGK+EILEFPV+MIDA++M FVD FHRFV P+ MSEQ I +YIEGKY
Sbjct: 121 KSQKLDYFLVLDLEGKVEILEFPVVMIDAQSMEFVDSFHRFVHPTAMSEQRIREYIEGKY 180
Query: 170 GKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPD 229
GKFGVDRVWHDTA+PF EV+Q+FE W+ H W+K +GG L AAF TCGNWDLKTKVP+
Sbjct: 181 GKFGVDRVWHDTAIPFMEVLQEFEDWIEHHKFWKKEQGGALNSAAFITCGNWDLKTKVPE 240
Query: 230 QCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTK 289
QC+VS+IKLP YFMEWINLKD++ NFY R ATGMM MM+ Q+P+ GSHHLGIDD K
Sbjct: 241 QCRVSKIKLPSYFMEWINLKDIYLNFYNRR---ATGMMTMMRELQMPIVGSHHLGIDDAK 297
Query: 290 NITRVLQRMLADGARVQITARRNPDSRNVQYLFEDRI 326
NI RV+QRMLADGA +QITA+R + +V++LF++RI
Sbjct: 298 NIARVVQRMLADGAVMQITAKRQSATGDVKFLFKNRI 334
>gi|217075877|gb|ACJ86298.1| unknown [Medicago truncatula]
Length = 252
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/258 (71%), Positives = 212/258 (82%), Gaps = 7/258 (2%)
Query: 70 MCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEIL 129
MCLY TQGKCTMMDD++HL+KFNHD S++LQV+ A SQ+ DFFLVLDLEGK+EIL
Sbjct: 1 MCLYHTQGKCTMMDDLVHLDKFNHDCSKELQVNIAGLSKVHSQNHDFFLVLDLEGKVEIL 60
Query: 130 EFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVI 189
EFPVL I AKT+ D+FHRFVRPS MSEQ IN+YIEGKYGK GVDRVWHDTA+PFKEVI
Sbjct: 61 EFPVLKISAKTLKVEDIFHRFVRPSNMSEQRINEYIEGKYGKIGVDRVWHDTAIPFKEVI 120
Query: 190 QQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLK 249
++FEAWL+Q LW GG+L RAAF TCGNWDLKTKVP QC+VS+IK+PPYFMEWINLK
Sbjct: 121 EEFEAWLVQQKLWT---GGNLDRAAFVTCGNWDLKTKVPQQCEVSRIKVPPYFMEWINLK 177
Query: 250 DVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
D++ NFY R ATGM+ MMK Q+P+ GSHHLGIDD KNITRVLQ ML DGA +QITA
Sbjct: 178 DIYLNFYNRR---ATGMVTMMKELQMPLVGSHHLGIDDPKNITRVLQHMLVDGALIQITA 234
Query: 310 RRNPDS-RNVQYLFEDRI 326
RRNP S R V + F++RI
Sbjct: 235 RRNPKSLREVSFFFKNRI 252
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 175/271 (64%), Positives = 218/271 (80%), Gaps = 4/271 (1%)
Query: 57 STHQKGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDF 116
S + + RWRPMCLY+T GKCT MDD HLE FNHD S++L+V AA + K SQ+ +F
Sbjct: 69 SLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKKSQEFNF 128
Query: 117 FLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDR 176
FLV+DLEGK+EILEFP+L++DAKTM VDLFHRFVRP+KMSEQ INKYIEGKYG+ GVDR
Sbjct: 129 FLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGELGVDR 188
Query: 177 VWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQI 236
VWHDTA+PFK+V+++FE WL +H LW+K L AAF TCGNWD+KTK+P+QC VS I
Sbjct: 189 VWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQCVVSNI 248
Query: 237 KLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQ 296
LPPYFMEWINLKDV+ NFY EA GM+ MM+ + + GSHHLGIDDTKNITRV+Q
Sbjct: 249 NLPPYFMEWINLKDVYLNFY---GREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQ 305
Query: 297 RMLADGARVQITARRNPDS-RNVQYLFEDRI 326
RML++GA +++TARR+ + RNV++LF++RI
Sbjct: 306 RMLSEGAVLKLTARRSKSNMRNVEFLFKNRI 336
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/268 (66%), Positives = 216/268 (80%), Gaps = 6/268 (2%)
Query: 62 GAS--TRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLV 119
GAS RWRPMCLY+T GKCT MDD HLE FNHD S++L V A K SQ+ +FFLV
Sbjct: 69 GASENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELPVAATDLGRKKSQEFNFFLV 128
Query: 120 LDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWH 179
+DLEGK+EILEFPVL++DAKTM VDLFHRFVRP+KMSEQ INKYIEGKYG+ GVDRVWH
Sbjct: 129 IDLEGKVEILEFPVLIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYGEVGVDRVWH 188
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
DTA+PFK+V+++FEAWL +H LW K G L AAF TCGNWD+KTK+P+QC VS I LP
Sbjct: 189 DTAIPFKQVVEEFEAWLAEHDLWTKDTDGALNDAAFITCGNWDIKTKIPEQCVVSNINLP 248
Query: 240 PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRML 299
PYF EWINLKD++ NFY EA GM+ MM+ + + GSHHLGIDDTKNITRV+QRML
Sbjct: 249 PYFTEWINLKDIYLNFY---GREARGMVSMMRQCGIKLMGSHHLGIDDTKNITRVVQRML 305
Query: 300 ADGARVQITARRN-PDSRNVQYLFEDRI 326
++GA ++ITARR+ ++RNV++LF++RI
Sbjct: 306 SEGAVLKITARRSKSNTRNVEFLFKNRI 333
>gi|18400647|ref|NP_566502.1| uncharacterized exonuclease domain-containing protein [Arabidopsis
thaliana]
gi|75331425|sp|Q8W566.1|Y3514_ARATH RecName: Full=Uncharacterized exonuclease domain-containing protein
At3g15140
gi|16930517|gb|AAL31944.1|AF419612_1 AT3g15140/F4B12_5 [Arabidopsis thaliana]
gi|19310525|gb|AAL84996.1| AT3g15140/F4B12_5 [Arabidopsis thaliana]
gi|332642103|gb|AEE75624.1| uncharacterized exonuclease domain-containing protein [Arabidopsis
thaliana]
Length = 337
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/337 (57%), Positives = 244/337 (72%), Gaps = 24/337 (7%)
Query: 5 KICLSRFAPLGSPNSLSAFPFSLPVPLTRAH--KLTC------------AQHISCSCSAS 50
++ LSR +P FS P L AH ++ C + S S S+S
Sbjct: 9 RVSLSRISPFRDTR------FSYPATLALAHTKRIMCNSSHSVSPSPSPSDFSSSSSSSS 62
Query: 51 SSSSSSSTHQKGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKC 110
SS S+ S + + RWRPMCLY+T GKCT MDD HLE FNHD S++L+V AA + K
Sbjct: 63 SSPSTFSLMETSENARWRPMCLYYTHGKCTKMDDPAHLEIFNHDCSKELRVAAADLERKK 122
Query: 111 SQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYG 170
SQ+ +FFLV+DLEGK+EILEFP+L++DAKTM VDLFHRFVRP+KMSEQ INKYIEGKYG
Sbjct: 123 SQEFNFFLVIDLEGKVEILEFPILIVDAKTMEVVDLFHRFVRPTKMSEQAINKYIEGKYG 182
Query: 171 KFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQ 230
+ GVDRVWHDTA+PFK+V+++FE WL +H LW+K L AAF TCGNWD+KTK+P+Q
Sbjct: 183 ELGVDRVWHDTAIPFKQVVEEFEVWLAEHDLWDKDTDWGLNDAAFVTCGNWDIKTKIPEQ 242
Query: 231 CKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
C VS I LPPYFMEWINLKDV+ NFY EA GM+ MM+ + + GSHHLGIDDTKN
Sbjct: 243 CVVSNINLPPYFMEWINLKDVYLNFY---GREARGMVSMMRQCGIKLMGSHHLGIDDTKN 299
Query: 291 ITRVLQRMLADGARVQITARRNPDS-RNVQYLFEDRI 326
ITRV+QRML++GA +++TARR+ + RNV++LF++RI
Sbjct: 300 ITRVVQRMLSEGAVLKLTARRSKSNMRNVEFLFKNRI 336
>gi|116784275|gb|ABK23281.1| unknown [Picea sitchensis]
Length = 338
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 169/277 (61%), Positives = 211/277 (76%), Gaps = 6/277 (2%)
Query: 52 SSSSSSTHQKGASTR-WRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKC 110
S + S T Q+ + W+PMCLY+TQ KCT MDD HLEKF+H S LQV + ++
Sbjct: 66 SFTDSETFQETKKPKYWKPMCLYYTQNKCTKMDDPEHLEKFSHHYSSRLQVGSDDLKNLQ 125
Query: 111 SQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYG 170
Q +D+FLVLDLEGK+EILEFPV+MIDA ++ FVD FHRFVRP KMSE+ + +YI+GKYG
Sbjct: 126 PQQVDYFLVLDLEGKVEILEFPVVMIDAHSLEFVDAFHRFVRPIKMSEKRVEEYIDGKYG 185
Query: 171 KFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQ 230
K +DRVWHDT++PF E++QQFE WL H LWEKG L RAAF TCGNWD+KTK+P+Q
Sbjct: 186 KLRLDRVWHDTSIPFAEMLQQFENWLRHHQLWEKG-ALTLHRAAFVTCGNWDVKTKIPEQ 244
Query: 231 CKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
C+VS IKLPPYFMEWINLKDV+ NFY R A GMM M+K +P+ GSHH+GIDD +N
Sbjct: 245 CQVSGIKLPPYFMEWINLKDVYLNFYNHR---AAGMMAMLKGLSMPIIGSHHVGIDDAQN 301
Query: 291 ITRVLQRMLADGARVQITARRNP-DSRNVQYLFEDRI 326
ITR+LQRML DGA +QITA+R S V+++F++RI
Sbjct: 302 ITRILQRMLVDGALMQITAKRTGMGSSGVKFMFKNRI 338
>gi|168056660|ref|XP_001780337.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668285|gb|EDQ54896.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 138/258 (53%), Positives = 192/258 (74%), Gaps = 5/258 (1%)
Query: 70 MCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEIL 129
MC YFTQG CT+M+D H +KF+H + +L+V +A + Q +F+LVLDLEG++EIL
Sbjct: 1 MCYYFTQGLCTLMEDENHTDKFSH-VYPELKVRSADLKRVKEQPFEFYLVLDLEGRVEIL 59
Query: 130 EFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVI 189
EFPVL+I+A+T+ VD FHRFVRP M+E+ +YI+GKYG++G+DRVWHDTA+PF EV+
Sbjct: 60 EFPVLLINAQTLEVVDRFHRFVRPVIMTEERQAEYIKGKYGRWGLDRVWHDTAIPFTEVL 119
Query: 190 QQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLK 249
FE+W+ H L+ L RAAF TCGNWD+KTK+P+QC+ S I+L PYF EWINLK
Sbjct: 120 NAFESWMESHSLYNPEDPSKLTRAAFVTCGNWDVKTKIPEQCRDSGIELKPYFNEWINLK 179
Query: 250 DVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
D++YNFY+ R A GM+ M+K +P+ G+HH+G+DD NI ++LQRMLA GA V+I+A
Sbjct: 180 DIYYNFYRRR---AGGMLAMLKGLNIPLTGTHHVGLDDAHNIAQILQRMLAHGAIVRISA 236
Query: 310 RRN-PDSRNVQYLFEDRI 326
+R D + V++ F +R+
Sbjct: 237 KRKVSDPKAVRWTFSNRV 254
>gi|242092960|ref|XP_002436970.1| hypothetical protein SORBIDRAFT_10g012821 [Sorghum bicolor]
gi|241915193|gb|EER88337.1| hypothetical protein SORBIDRAFT_10g012821 [Sorghum bicolor]
Length = 227
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 136/245 (55%), Positives = 172/245 (70%), Gaps = 36/245 (14%)
Query: 82 MDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEILEFPVLMIDAKTM 141
M+D MHLEKF H++ DL V+A+A Q L++FL+LDLEG++EILEFPV+MIDA++
Sbjct: 18 MNDAMHLEKFGHNLKMDLPVNASATDKFKPQKLEYFLILDLEGRVEILEFPVVMIDAQST 77
Query: 142 AFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHL 201
F+D FHRFVRP+ MSEQ +YIEGKYGKFGVDRVWHDTA+PFKEV+Q+FE WL H+L
Sbjct: 78 EFIDSFHRFVRPTAMSEQRTTEYIEGKYGKFGVDRVWHDTAVPFKEVLQEFEDWLGNHNL 137
Query: 202 WEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKS 261
W+K +GG L R AF TCGNWDLKTK
Sbjct: 138 WKKEQGGSLNRGAFVTCGNWDLKTK----------------------------------- 162
Query: 262 EATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQYL 321
ATGMM MM+ Q+P+ G+HHLGIDD+KNI RV+QRM+ADGA ++ITA+R + NV++L
Sbjct: 163 -ATGMMTMMRELQLPIIGNHHLGIDDSKNIARVVQRMIADGAVIEITAKRQSTTGNVKFL 221
Query: 322 FEDRI 326
F+DRI
Sbjct: 222 FKDRI 226
>gi|302767084|ref|XP_002966962.1| hypothetical protein SELMODRAFT_87227 [Selaginella moellendorffii]
gi|300164953|gb|EFJ31561.1| hypothetical protein SELMODRAFT_87227 [Selaginella moellendorffii]
Length = 315
Score = 283 bits (724), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/293 (48%), Positives = 190/293 (64%), Gaps = 8/293 (2%)
Query: 39 CAQHISCSCSASSSSSSSSTHQK--GASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDIS 96
C S + S S + H + S R +PMCLYFTQ +C MD HLEKF+H
Sbjct: 26 CQASRSDEATPSISPCGAPNHGRFEDLSRRRKPMCLYFTQNRCQYMDSPEHLEKFSHTFP 85
Query: 97 RDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
V A + Q D FLVLDLEGK+EILEFPV+++DAKT+ VD FHRFVRP ++
Sbjct: 86 ELDPVVLDAARPLPRQPFDKFLVLDLEGKVEILEFPVVLLDAKTLTVVDRFHRFVRPCEL 145
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
+ YI GKYG++ ++R+W DTA+PF+E + FE WL QH L + LK +AF
Sbjct: 146 KGSRLQAYIAGKYGRWKLERLWEDTAIPFQETLLAFEDWLEQHSLRDP-ESHLLKNSAFV 204
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPR---KSEATGMMGMMKNR 273
TCGNWD+KTK+P+QC S I LP YF EWINLKD+F NFY R KS+A GM+ MM++
Sbjct: 205 TCGNWDIKTKIPEQCITSGIPLPSYFCEWINLKDIFLNFYNKRARAKSKAPGMLSMMRSL 264
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQYLFEDRI 326
+ + GSHHLG+DD NI R++Q+M +DGA + ITA+R V++LF++R+
Sbjct: 265 DMRVQGSHHLGLDDAHNIARIVQKMESDGAVLSITAKRR--GNRVEFLFQNRV 315
>gi|302755252|ref|XP_002961050.1| hypothetical protein SELMODRAFT_71144 [Selaginella moellendorffii]
gi|300171989|gb|EFJ38589.1| hypothetical protein SELMODRAFT_71144 [Selaginella moellendorffii]
Length = 261
Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 180/264 (68%), Gaps = 6/264 (2%)
Query: 66 RWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGK 125
R +PMCLYFTQ +C MD HLEKF+H V A + Q D FLVLDLEGK
Sbjct: 1 RRKPMCLYFTQNRCQYMDSPEHLEKFSHTFPELDPVVLDAARPLPRQPFDKFLVLDLEGK 60
Query: 126 IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPF 185
+EILEFPV+++DAKT+ VD FHRFVRP ++ + YI GKYG++ ++R+W DTA+PF
Sbjct: 61 VEILEFPVVLLDAKTLTVVDRFHRFVRPCELKGSRLQAYIAGKYGRWKLERLWEDTAIPF 120
Query: 186 KEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEW 245
+E + FE WL QH L LK +AF TCGNWD+KTK+P+QC S I LP YF EW
Sbjct: 121 QETLLAFEDWLEQHSL-RDPESHLLKNSAFVTCGNWDIKTKIPEQCITSGIPLPSYFCEW 179
Query: 246 INLKDVFYNFYKPR---KSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
INLKD+F NFY R KS+A GM+ MM++ + + GSHHLG+DD NI R++Q+M +DG
Sbjct: 180 INLKDIFLNFYNKRARAKSKAPGMLSMMRSLDMRVQGSHHLGLDDAHNIARIIQKMESDG 239
Query: 303 ARVQITARRNPDSRNVQYLFEDRI 326
A + ITA+R V++LF++R+
Sbjct: 240 AVLSITAKRR--GNRVEFLFQNRV 261
>gi|413944432|gb|AFW77081.1| hypothetical protein ZEAMMB73_589340 [Zea mays]
Length = 217
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 143/210 (68%), Gaps = 6/210 (2%)
Query: 1 MSFSKICLSRFAPLGSPNSLSAF-PFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSS-- 57
M+ +++ S A L P S F PFS P+ + + + + S ++ S+ ++
Sbjct: 1 MALARVSPSSLANLIPPLLQSFFRPFSSDFPIRNSRRRSSPVAAAFSLTSQSAHAAREGL 60
Query: 58 -THQKGASTR--WRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDL 114
S+R W+P CLY+TQGKCTMM+D MHLEKF+H++ DL V+A+A Q L
Sbjct: 61 VMEAPRPSSRYPWKPTCLYYTQGKCTMMNDAMHLEKFSHNLKMDLPVNASATDKSKPQKL 120
Query: 115 DFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGV 174
++ L+LDLEG++EILEFPV+MIDA+ FVD FHRFVRP+ MSEQ +YIEGKYGKFGV
Sbjct: 121 EYLLILDLEGRVEILEFPVMMIDAQNREFVDSFHRFVRPTAMSEQRTTEYIEGKYGKFGV 180
Query: 175 DRVWHDTALPFKEVIQQFEAWLIQHHLWEK 204
DRVWHDTA PFK+V+Q+FE WL H+LW+K
Sbjct: 181 DRVWHDTATPFKQVLQEFEDWLGNHNLWKK 210
>gi|440790416|gb|ELR11699.1| three prime histone mRNA exonuclease 1, putative [Acanthamoeba
castellanii str. Neff]
Length = 256
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 149/237 (62%), Gaps = 14/237 (5%)
Query: 101 VDAAAFQHKCSQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
D + + Q +DFFLVLDLEGK EILEFPV +++ KT+ D FHR+VRP S++
Sbjct: 23 TDYEKKEERKEQIVDFFLVLDLEGKQEILEFPVAIVNVKTLEVEDFFHRYVRPVTFSDEQ 82
Query: 161 INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLW------EKG-RGGHLKRA 213
+ +YI GKYGKFG+ W ++A+PF +V+ QF WL H L E G G ++A
Sbjct: 83 LAQYINGKYGKFGLTEKWFESAMPFTDVLVQFNDWLGHHGLLHSILRSEDGEETGEERQA 142
Query: 214 A----FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
A F TCGNWD+KT++P QC +S+ +P YF EW+NLKDV+ NFYK + A GM M
Sbjct: 143 AYSFLFVTCGNWDIKTQIPRQCAISKFDMPGYFHEWVNLKDVYLNFYKHK---ALGMRSM 199
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQYLFEDRI 326
+ + + G HH G DD NI +++ RM+ DGA V+ TA+R ++ V Y ++ R+
Sbjct: 200 LSGLGIQLEGDHHSGKDDVHNICKIVMRMVNDGALVEPTAKRAIETGYVTYKYQHRV 256
>gi|297724825|ref|NP_001174776.1| Os06g0353400 [Oryza sativa Japonica Group]
gi|255677026|dbj|BAH93504.1| Os06g0353400 [Oryza sativa Japonica Group]
Length = 166
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 67/139 (48%), Positives = 88/139 (63%), Gaps = 12/139 (8%)
Query: 24 PFSLPVPLTRAHKLTCAQHISCSCSASSSSSSSSTHQKG----------ASTR--WRPMC 71
PFS P + R H + +A+ S +S G S+R W+P C
Sbjct: 23 PFSSPSSVLRPRVTRVPHHRGFAIAAALSQASPLPSADGDGAVMEAPPRPSSRRPWKPTC 82
Query: 72 LYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIEILEF 131
LY+TQGKCTM++D +HLEKFNH++ DL V+ +A SQ LD+FLVLDLEGK+EILEF
Sbjct: 83 LYYTQGKCTMLNDTLHLEKFNHNLPTDLPVNYSAADKVKSQKLDYFLVLDLEGKVEILEF 142
Query: 132 PVLMIDAKTMAFVDLFHRF 150
PV+MIDA++M FVD FHR+
Sbjct: 143 PVVMIDAQSMEFVDSFHRY 161
>gi|290992875|ref|XP_002679059.1| exonuclease III protein [Naegleria gruberi]
gi|284092674|gb|EFC46315.1| exonuclease III protein [Naegleria gruberi]
Length = 220
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 27/210 (12%)
Query: 111 SQDLDFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+FLVLD E + EI+EFP + I+AKT+ FH +V+P
Sbjct: 11 EQKFDYFLVLDFEASCDDKIKNFRNEIIEFPTVAINAKTVKIDHEFHYYVKPKANP---- 66
Query: 162 NKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + K G+ + W D + F++V++ W++ + + + AF TCG
Sbjct: 67 ---ILTDFCKELTGIQQDWIDNGVEFEDVLKFHNQWMMDNFISKNLT------FAFVTCG 117
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WDLKT + QC+ IK+P YF W+N+K + Y GM M+ + ++ + G
Sbjct: 118 DWDLKTMITKQCRKENIKVPSYFSSWVNIKKKYTEIYSKH---VHGMTDMLNHMKLELIG 174
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITA 309
HH GIDD KNI R+L ML G ++ ITA
Sbjct: 175 KHHSGIDDCKNIARILCEMLKQGKQIDITA 204
>gi|198414320|ref|XP_002130965.1| PREDICTED: similar to three prime histone mRNA exonuclease 1 [Ciona
intestinalis]
Length = 322
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 109/216 (50%), Gaps = 34/216 (15%)
Query: 112 QDLDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q + +VLD E E I+EFP ++ID + VD+FH + +P+
Sbjct: 85 QHYPYLVVLDYEATCEQQNPQDYLHEIIEFPAVLIDTTSTERVDVFHSYCKPA------- 137
Query: 162 NKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
+ + +F G+ + D+A F V FE W+ +H L+ ++ AF
Sbjct: 138 ---LNPQLSEFCTSLTGIQQSDVDSAPDFTTVFNNFETWMKKHDLFAP------RKCAFV 188
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVP 276
T G WD + QC +S+IK P + +WINLK V+ NFYK +K + MM M+ N +
Sbjct: 189 TDGPWDFSRFLNIQCCLSEIKYPRWAKKWINLKKVYGNFYKLKKPK---MMDMLSNIGLE 245
Query: 277 MFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G HH G+DD N++R++QRML DGA Q R N
Sbjct: 246 FEGRHHCGMDDATNLSRIVQRMLDDGAIFQFNERLN 281
>gi|443698717|gb|ELT98575.1| hypothetical protein CAPTEDRAFT_130678 [Capitella teleta]
Length = 328
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 110/208 (52%), Gaps = 23/208 (11%)
Query: 112 QDLDFFLVLDLEGKIE--------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q DF+LV+D E E I+EFP+++ID KT VD FH +VRP+ IN
Sbjct: 76 QYYDFYLVVDFEATCEDSHTWPHEIIEFPIVVIDGKTHQVVDEFHSYVRPT------INP 129
Query: 164 YI-EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G+ + D++ F EV+ E+WL ++ KG R+AF T G WD
Sbjct: 130 VLTDFCISLTGISQDQVDSSPLFPEVLTSVESWLHRNKYCGKG-----VRSAFVTDGPWD 184
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
+ + QCK S + P + W+N++ + NFY ++ T + M++N + G H
Sbjct: 185 MSRFMYLQCKHSNLAFPRWANTWVNIRKTYCNFYHFKR---TSLRKMLENMGMSFEGRPH 241
Query: 283 LGIDDTKNITRVLQRMLADGARVQITAR 310
G+DDT+NI R+ QRML DG+ + + R
Sbjct: 242 CGLDDTRNIARIAQRMLQDGSPLNVNER 269
>gi|340368534|ref|XP_003382806.1| PREDICTED: ERI1 exoribonuclease 3-like [Amphimedon queenslandica]
Length = 209
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 114 LDFFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
L ++LVLD E EI+EFPVL ++AKT+ +FH +VRP+ S +
Sbjct: 10 LSYYLVLDFEATCNASHLPSPRPQEIIEFPVLAVNAKTLETEKIFHTYVRPT--SHPLLT 67
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ G + + D EV++ F +WL + E R F TCG+WD
Sbjct: 68 PFCTQLTG---ITQSQVDGQPTLPEVLRSFHSWLETNGFLEPS-----VRFCFVTCGDWD 119
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
LKT +P QCK +P YF W+N+K VF +A GM M++ ++P+ G HH
Sbjct: 120 LKTMLPGQCKYFDWPVPEYFRSWMNIKFVFQRL---TGVKAKGMPHMLEYFKIPLEGRHH 176
Query: 283 LGIDDTKNITRVLQRMLADGARVQITA 309
GIDD++NI ++L R+ + +Q T
Sbjct: 177 SGIDDSRNIAKILTRLARIESNLQPTT 203
>gi|348521266|ref|XP_003448147.1| PREDICTED: 3'-5' exoribonuclease 1-like [Oreochromis niloticus]
Length = 341
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFP+++I+ T+ VD F +V+P +N
Sbjct: 120 DYICVVDFEATCEEDNPSDFLHEIIEFPMVLINTHTLEIVDTFQEYVKP------ELNPQ 173
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ K G+ + D A PF V+Q+ +WL + L G + A T G+WD+
Sbjct: 174 LSDFCVKLTGITQKMVDEADPFPVVLQRVVSWLQEREL------GTKYKYAILTDGSWDM 227
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC+VS+IK PP+ +WIN++ + NFYK +++ T + M++ + G H
Sbjct: 228 SKFLNIQCRVSRIKYPPFAKKWINIRKSYGNFYKVPRTQ-TKLSTMLEKLGLTYEGRPHS 286
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD++NI R+ RML DG ++++ R
Sbjct: 287 GLDDSRNIARIAVRMLQDGCQLRVNER 313
>gi|358336849|dbj|GAA55310.1| ERI1 exoribonuclease 3 [Clonorchis sinensis]
Length = 230
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 22/208 (10%)
Query: 111 SQDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
SQ +FLVLD E EI+EFPV+ ++++T+ +FH +++P E +
Sbjct: 33 SQKFKYFLVLDFEATCERNRKLRPAEIIEFPVVKLNSQTLLEESIFHHYIQPVFHPE--L 90
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G D V D +EV+Q F+ WL++ L G F TCG+W
Sbjct: 91 TDFCTELTGIIQ-DMV--DNQPRLEEVLQLFDEWLVKEKL-----TGTENTFTFVTCGDW 142
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
DL+T +P QC+ I +P YF +WIN+K F + R + M+ + +P+ G H
Sbjct: 143 DLRTMLPSQCRELGIPVPHYFRQWINIKQTFQDV---RGLFPHSLPHMLSDLDLPLQGRH 199
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITA 309
H GIDD +NI VL +++ GA IT
Sbjct: 200 HSGIDDARNIATVLCQLIKLGAVPDITG 227
>gi|256083202|ref|XP_002577838.1| prion interactor pint1 [Schistosoma mansoni]
gi|360044777|emb|CCD82325.1| putative prion interactor pint1 [Schistosoma mansoni]
Length = 191
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 22/206 (10%)
Query: 106 FQHKCSQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
F+ C QD + EI+EFPVLMI+A T+ +FHR+VRP+ IN +
Sbjct: 5 FEATCEQDRKLPVA-------EIIEFPVLMINASTLQTEAVFHRYVRPT------INPVL 51
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D V++ F ++L ++L + AF TCG+ DLK
Sbjct: 52 SDFCTELTGIIQSMVDDQPDLPTVLKIFNSFLDANNLNTIPY-----QFAFVTCGDCDLK 106
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
T +P QCK I +P YF +WINLK V+ N GMM M+ + G HH G
Sbjct: 107 TMLPRQCKALGIDVPDYFKQWINLKQVYCNVM---GQFPFGMMSMLSGLNIKHTGRHHSG 163
Query: 285 IDDTKNITRVLQRMLADGARVQITAR 310
IDD NI +L+ ++ GA + +T
Sbjct: 164 IDDCHNIANILRELIRCGATLDVTGN 189
>gi|324515366|gb|ADY46181.1| 3'-5' exonuclease eri-1 [Ascaris suum]
Length = 402
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 111/235 (47%), Gaps = 33/235 (14%)
Query: 102 DAAAFQHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVR 152
+A +++ + ++F+V+D E E I+EFP ++ID + VD FH VR
Sbjct: 135 NAEPMRNRTERYYEYFVVMDFECTCEDEVYEYEHEIIEFPAVLIDVRNRRIVDTFHSHVR 194
Query: 153 PSKMSEQHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG 207
P I K +F GV + D ALPF +V F W+ H L G
Sbjct: 195 PR----------INPKLSEFCSRLTGVTQEMVDNALPFVDVFDSFRMWMQSHRL-----G 239
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPY-FMEWINLKDVFYNFY-KPRKSEATG 265
+ R AF T G WD+ QC S + P+ F +IN++ F N Y K ++ T
Sbjct: 240 HNNARYAFVTDGPWDIAKFFQMQCLQSGLGSVPHDFRHYINIRKAFLNKYLKGHHAQKTN 299
Query: 266 MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR--RNPDSRNV 318
+ GM+ + G H G+DD+KNI R++ RML D + ++I R R D R V
Sbjct: 300 LSGMLSELGMTFEGREHCGLDDSKNIARIVIRMLEDRSELRINERIARGSDKRKV 354
>gi|47218345|emb|CAG04177.1| unnamed protein product [Tetraodon nigroviridis]
Length = 340
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 108/207 (52%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFP+++I+ T+ VD F +V+P +N
Sbjct: 119 DYICVVDFEATCEVDNPSDYHHEIIEFPMVLINTHTLEIVDSFREYVKPE------LNPQ 172
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ K G+ + D A PF V+++ AWL + L G + A T G+WD+
Sbjct: 173 LSDFCVKLTGITQKMVDKAEPFPAVLERAVAWLQEREL------GTKYKYAILTDGSWDM 226
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC++S+I+ P + +WIN++ + NFYK +++ T + M++ + G H
Sbjct: 227 SKFLNIQCQISRIRYPQFAKKWINIRKAYRNFYKVSRTQ-TKLSTMLEKLGLTYNGRPHC 285
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD++NI R+ RML DG ++++ R
Sbjct: 286 GLDDSRNIARIAVRMLQDGCQLRVNER 312
>gi|449551211|gb|EMD42175.1| hypothetical protein CERSUDRAFT_90779 [Ceriporiopsis subvermispora
B]
Length = 210
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 110/214 (51%), Gaps = 32/214 (14%)
Query: 114 LDFFLVLDLE--------GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
L + L+LD E G EI+EFP L+ D + FH +VRP I+ +
Sbjct: 10 LQYLLILDFEATCGDDLRGPPEIIEFPTLLYDIQKDEVQATFHEYVRPI------ISPTL 63
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
K G+ + D A PF EV +F+ +L H +++ + AAF TCG+WDLK
Sbjct: 64 TAFCTKLTGITQDTVDAAQPFPEVWSRFQDFLRSHGIYDAA-----ESAAFLTCGDWDLK 118
Query: 225 TKVPDQCKVSQIK---------LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
T +P Q +S+ + +PPY WIN+K F Y R M+GM++ ++
Sbjct: 119 TMLPRQLALSESEHGLDEAGDLIPPY-NRWINIKQAFRKQYGMRYQ--NDMLGMLRKLRL 175
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
+ G HH GIDD KN+ +++++M A+G + Q+ +
Sbjct: 176 ELEGRHHSGIDDCKNVLQIVRKMRAEGWKPQLAS 209
>gi|308452945|ref|XP_003089242.1| hypothetical protein CRE_11597 [Caenorhabditis remanei]
gi|308241498|gb|EFO85450.1| hypothetical protein CRE_11597 [Caenorhabditis remanei]
Length = 264
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Query: 108 HKCSQDLDFFLVLDLE--------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
K SQ ++ L+LD E G I EI+EFPV+ + + FH++VRP++
Sbjct: 41 QKMSQQFEYLLILDFEATCQENSKGPILPVQEIIEFPVVQLSTSDWKEIRRFHQYVRPTE 100
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
S K G+ + D +V+++F WL + E AF
Sbjct: 101 SS-----KLTSFCTSLTGIIQEMVDEKPTLSDVLEEFNKWLKEDSRLENNN------FAF 149
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
TCG+WDLK +P++ K I +P YF +WIN+K + A GMM ++K ++
Sbjct: 150 VTCGDWDLKVALPNEAKFKNIPIPDYFHQWINVKKAYAEH---TNDFARGMMQLLKIYKL 206
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDS 315
G HH GIDD NI V++ + DG +IT+ P +
Sbjct: 207 QHQGRHHSGIDDVANICEVVRCLGKDGHNYRITSNDQPST 246
>gi|324519006|gb|ADY47259.1| ERI1 exoribonuclease 3 [Ascaris suum]
Length = 291
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 112 QDLDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+FLVLD E E I+EFPV+ KT+ V FH +V P++ +
Sbjct: 64 QYFDYFLVLDFEATCEQNAKIQPVQEIIEFPVVQFCTKTLQEVARFHEYVHPTERPV--L 121
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA-AFATCGN 220
+ G + + D + +V+ +F WL Q L + G ++ + F TCG+
Sbjct: 122 TSFCTNLTG---IVQEMVDNQMILPDVLAKFRRWLSQQCLIDAESGDRVRNSWTFVTCGD 178
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMGMMKNRQVPMF 278
WDL T +P + + LPPYF WINLK + N Y P +M M+ + Q+P
Sbjct: 179 WDLGTILPQEASFRGLHLPPYFGSWINLKKAYRNAKGYFP-----NSLMVMLNDLQIPHT 233
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQITA 309
G H GIDD NI +++++ DG ++ T+
Sbjct: 234 GRLHSGIDDVINICAIVRKLCEDGYLLENTS 264
>gi|324520531|gb|ADY47658.1| ERI1 exoribonuclease 3 [Ascaris suum]
Length = 291
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 23/211 (10%)
Query: 112 QDLDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+FLVLD E E I+EFPV+ KT+ V FH +V P++ +
Sbjct: 64 QYFDYFLVLDFEATCEQNAKIQPVQEIIEFPVVQFCTKTLQEVARFHEYVHPTERPV--L 121
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA-AFATCGN 220
+ G + + D + +V+ +F WL Q L + G ++ + F TCG+
Sbjct: 122 TSFCTNLTG---IVQEMVDNQMILPDVLAKFRRWLSQQCLIDAESGDRVRNSWTFVTCGD 178
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMGMMKNRQVPMF 278
WDL T +P + + LPPYF WINLK + N Y P +M M+ + Q+P
Sbjct: 179 WDLGTILPQEASFRGLHLPPYFGSWINLKKAYRNAKGYFP-----NSLMVMLNDLQIPHT 233
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQITA 309
G H GIDD NI +++++ DG ++ T+
Sbjct: 234 GRLHSGIDDVINICAIVRKLCEDGYLLENTS 264
>gi|432943748|ref|XP_004083266.1| PREDICTED: 3'-5' exoribonuclease 1-like [Oryzias latipes]
Length = 342
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 107/211 (50%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFP+++I+ T+ VD F +V+P
Sbjct: 121 DYICVVDFEATCEEDNPSDFLHEIIEFPLVLINTHTLQIVDTFQSYVKPE---------- 170
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ K F G+ + D A PF +V+Q+ WL + L G + A T G
Sbjct: 171 LNPKLSDFCVTLTGITQEMVDEADPFPQVLQRVVKWLQERDL------GTKHKYAILTDG 224
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC+VS+I+ P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 225 SWDMSKFLNIQCRVSRIRYPQFAKKWINIRKSYGNFYKLPRSQ-TKLSTMLEKLGMKYEG 283
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD++NI R+ RML DG ++++ R
Sbjct: 284 RPHCGLDDSRNIARIAVRMLQDGCQLRVNER 314
>gi|242014471|ref|XP_002427913.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
gi|212512397|gb|EEB15175.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
Length = 386
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 102/208 (49%), Gaps = 29/208 (13%)
Query: 116 FFLVLDLEG--------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEG 167
+++V+D E + EI+EFP +++++K D F + +P I
Sbjct: 104 YYVVIDFEATCDNKKIDRQEIIEFPAVLVNSKKQKIEDCFRMYCKPR----------INP 153
Query: 168 KYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
K ++ G+ + D A F +V+ + WL +H+L G KR A T GNWD
Sbjct: 154 KLSQYCMELTGITQEQVDNAETFDKVLSHYNNWLKKHNL-----GTKNKRYAVVTDGNWD 208
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
+ + QC S + +P + W+NLK F NFY+ ++ + M++ + G H
Sbjct: 209 MSKFLVSQCHYSNVPIPKWGKTWVNLKKTFKNFYQKGENRIC-LKTMLEMLNMEFIGRPH 267
Query: 283 LGIDDTKNITRVLQRMLADGARVQITAR 310
G+DD KNI R+L +M+ DG+ +QI R
Sbjct: 268 CGLDDAKNIARILLKMIYDGSNIQINER 295
>gi|298711928|emb|CBJ48615.1| phosphotransferase [Ectocarpus siliculosus]
Length = 528
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 124 GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
G +E++EFP +++DA ++ +D F +VRP + + + G +++ D +
Sbjct: 332 GPMEVIEFPTVLLDAHSLKVLDEFRVYVRPVR--HPILTPFCTSLTG---IEQSTVDGGV 386
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
F+E + Q +L ++ G + F TCGNWDLKT +P QCK+ +PP+F
Sbjct: 387 LFEEALSQHTEFLRRNSCLP----GQERSCLFVTCGNWDLKTMMPAQCKLIDAPVPPHFN 442
Query: 244 EWINLKDVFYNFY---------KPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRV 294
W N+K+VF + +PR + GM M+ + + G HH G+DD +NI R+
Sbjct: 443 SWANIKEVFRDVMYRAARQSQRRPRGGKVGGMPAMLSALGLVLEGRHHSGLDDCRNIARI 502
>gi|312092765|ref|XP_003147452.1| exonuclease [Loa loa]
Length = 401
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 21/220 (9%)
Query: 102 DAAAFQHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVR 152
+A ++K D+F+V+D E E I+EFP +++D + VD+FH +VR
Sbjct: 135 NAEPLRNKTETFYDYFVVIDFECTCEADLYDYNHEIIEFPAILVDVRKKEIVDVFHSYVR 194
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
P ++ ++++ G+ + D ALPF +V+ F AW+ HHL +K R
Sbjct: 195 P--LANPQLSEFCSAFT---GITQEMVDKALPFIDVLDSFRAWMQLHHLGQKE-----VR 244
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIK-LPPYFMEWINLKDVFYNFY-KPRKSEATGMMGMM 270
AF T G WD+ QC S++ +P F ++N++ F N Y K ++ + M+
Sbjct: 245 YAFVTDGPWDIAKFFQMQCIQSKLNPIPHDFRFYVNVRRSFANKYCKKHPTQKINLSRML 304
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ + G H G+DD+KNI +++ RML D + +++ +
Sbjct: 305 TSLNMKFEGREHSGLDDSKNIAKIVIRMLGDKSELRVNEK 344
>gi|393911376|gb|EFO16618.2| exonuclease [Loa loa]
Length = 388
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 21/220 (9%)
Query: 102 DAAAFQHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVR 152
+A ++K D+F+V+D E E I+EFP +++D + VD+FH +VR
Sbjct: 122 NAEPLRNKTETFYDYFVVIDFECTCEADLYDYNHEIIEFPAILVDVRKKEIVDVFHSYVR 181
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
P ++ ++++ G+ + D ALPF +V+ F AW+ HHL +K R
Sbjct: 182 P--LANPQLSEFCSAFT---GITQEMVDKALPFIDVLDSFRAWMQLHHLGQKE-----VR 231
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIK-LPPYFMEWINLKDVFYNFY-KPRKSEATGMMGMM 270
AF T G WD+ QC S++ +P F ++N++ F N Y K ++ + M+
Sbjct: 232 YAFVTDGPWDIAKFFQMQCIQSKLNPIPHDFRFYVNVRRSFANKYCKKHPTQKINLSRML 291
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ + G H G+DD+KNI +++ RML D + +++ +
Sbjct: 292 TSLNMKFEGREHSGLDDSKNIAKIVIRMLGDKSELRVNEK 331
>gi|410918560|ref|XP_003972753.1| PREDICTED: 3'-5' exoribonuclease 1-like [Takifugu rubripes]
Length = 340
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFP+++I+ T+ VD F +V+P +N
Sbjct: 119 DYICVVDFEATCEVDNPSDFHHEIIEFPMVLINTHTLEIVDSFQEYVKP------ELNPQ 172
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ K G+ + D A F V+++ AWL + L G + A T G+WD+
Sbjct: 173 LSDFCVKLTGITQKMVDEADSFPAVLERVVAWLQEREL------GTKYKYAILTDGSWDM 226
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC++S+I+ P + +WIN++ + NFYK +++ T + M++ + G H
Sbjct: 227 SKFLNIQCQISRIRYPQFAKKWINIRKSYRNFYKVSRTQ-TKLSTMLEKLGLTYSGRPHC 285
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD++NI R+ RML DG ++++ R
Sbjct: 286 GLDDSRNIARIAVRMLQDGCQLRVNER 312
>gi|308492914|ref|XP_003108647.1| hypothetical protein CRE_11149 [Caenorhabditis remanei]
gi|308248387|gb|EFO92339.1| hypothetical protein CRE_11149 [Caenorhabditis remanei]
Length = 280
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 103/220 (46%), Gaps = 26/220 (11%)
Query: 108 HKCSQDLDFFLVLDLE--------GKI----EILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
K SQ ++ L+LD E G I EI+EFPV+ + + FH++VRP++
Sbjct: 57 QKMSQQFEYLLILDFEATCQENSKGPILPVQEIIEFPVVQLSTSDWKEIRRFHQYVRPTE 116
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
K G+ + D V+++F+ WL + E AF
Sbjct: 117 SP-----KLTSFCTSLTGIIQEMVDEKPTLSGVLEEFDKWLKEDSRLENNN------FAF 165
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
TCG+WDLK +P++ K I +P YF +WIN+K + A GMM ++K ++
Sbjct: 166 VTCGDWDLKVALPNEAKFKNIPIPDYFHQWINVKKAYAEHT---NDFARGMMQLLKIYKL 222
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDS 315
G HH GIDD NI V++ + DG +IT+ P +
Sbjct: 223 QHQGRHHSGIDDVANICEVVRCLGKDGHNYRITSNDQPST 262
>gi|226372150|gb|ACO51700.1| Histone mRNA 3-exonuclease 1 [Rana catesbeiana]
Length = 348
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 114/236 (48%), Gaps = 38/236 (16%)
Query: 89 EKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIE----------ILEFPVLMIDA 138
+K H +S+D A + D+ ++D E E I+EFP+++++
Sbjct: 109 QKLTHILSKDSSETDAYY--------DYICIIDFEATCEGGNATDYVHEIIEFPIVLLNT 160
Query: 139 KTMAFVDLFHRFVRPS---KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAW 195
+T+ D F R+V+P ++SE IN G+ + D A F V+Q W
Sbjct: 161 RTLEIEDTFQRYVKPEIKPQLSEFCINLT--------GITQDIIDQADTFPVVLQSVVDW 212
Query: 196 LIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF 255
+ Q L G + A T G+WD+ + QC+VS+IK P + +WIN++ + NF
Sbjct: 213 MRQKEL------GTKYKYAILTDGSWDMSKFLNMQCRVSRIKYPRFAKKWINIRKCYGNF 266
Query: 256 YK-PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
YK PR T + M++ + G H G+DD+KNI R+ ML DG +++ R
Sbjct: 267 YKVPRNQ--TKLTVMLEKLGMSYIGRLHSGLDDSKNIARIAIHMLQDGCELRVNER 320
>gi|383849952|ref|XP_003700597.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Megachile rotundata]
Length = 609
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 103/205 (50%), Gaps = 28/205 (13%)
Query: 108 HKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q ++ LV+D E E I+EFP + +T ++FH +V+P
Sbjct: 414 EKAKQHFNYLLVVDFESTCERYVKMQPQEIIEFPCAAVSTRTWNIENVFHEYVKPK---- 469
Query: 159 QHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
IN + + G+ + D F EV +F W+ +H+ + +G + T
Sbjct: 470 --INPELTPFCTELTGIIQDMVDNQPHFPEVFDKFCKWIEEHNYFTEGNN-----CVYVT 522
Query: 218 CGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMGMMKNRQV 275
CG+WD+K+ +P QCK+ I +P +F +WINLK++F + Y PR + M+ ++
Sbjct: 523 CGDWDMKSMLPQQCKLDNIPVPDHFQKWINLKNIFCDVTQYYPR-----SLKDMLAFLKL 577
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLA 300
P+ G H GI+D +N+ R++Q + A
Sbjct: 578 PLHGRLHSGINDVENMVRIIQALQA 602
>gi|291233033|ref|XP_002736458.1| PREDICTED: Eri3 protein-like [Saccoglossus kowalevskii]
Length = 216
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 103/207 (49%), Gaps = 21/207 (10%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD ++FLVLD E E I+E PVL I AKT +FH +V+P+ + +
Sbjct: 18 QDYNYFLVLDFEATCEKSTKIYPQEIIEIPVLKIHAKTFETEAIFHTYVQPT--ANPILT 75
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ G D V + +E ++ + W++ L + G + F TCG+WD
Sbjct: 76 PFCTELTG-ITQDVVCGKPKI--EEALKMLDKWMLDQGLLD-GETAFV----FVTCGDWD 127
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
LKT +P QCK ++ + YF WIN+K F +P + +M M++ + G HH
Sbjct: 128 LKTMLPGQCKYFRLPIANYFKSWINIKRPFSEVVRP--NIRVDLMEMLQMLDLEHHGRHH 185
Query: 283 LGIDDTKNITRVLQRMLADGARVQITA 309
GIDDTKNI +LQ + G + + T+
Sbjct: 186 SGIDDTKNIANILQELAKRGCKFKATS 212
>gi|449500377|ref|XP_002196066.2| PREDICTED: 3'-5' exoribonuclease 1-like [Taeniopygia guttata]
Length = 355
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 104/212 (49%), Gaps = 34/212 (16%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFPV++++ +T+ D F ++V+P
Sbjct: 134 DYICVVDFEATCEEGNPPEFVHEIIEFPVVLVNTRTLEIEDTFQQYVKPE---------- 183
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I K F G+ + D A F +V+Q W+ Q L G + T G
Sbjct: 184 INPKLSDFCISLTGITQDIVDKADIFPQVLQNVIEWMRQREL------GTKYSYSMLTDG 237
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMF 278
+WD+ + QC++S+IK P + +WIN++ + NFYK PR T + M++N +
Sbjct: 238 SWDMSKFLNTQCRISRIKYPSFAKKWINIRKSYGNFYKVPRNQ--TKLTIMLENLGMNYD 295
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H G+DD+KNI R+ RML DG +++ R
Sbjct: 296 GRPHSGLDDSKNIARIAIRMLQDGCDLRVNER 327
>gi|345322776|ref|XP_001508919.2| PREDICTED: 3'-5' exoribonuclease 1-like [Ornithorhynchus anatinus]
Length = 387
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ V+D E E I+EFP+++++ T+ D F ++VRP +++S+ I
Sbjct: 166 DYICVIDFEATCEEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 225
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+Q+ W+ Q L G + + T G+W
Sbjct: 226 NLT--------GITQDVVDRADTFPQVLQKVVEWMRQKEL------GTKYKYSILTDGSW 271
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S +K P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 272 DMSKFLTIQCRISHLKYPAFAKKWINIRKSYGNFYKVPRSQ-TKLAIMLEKLGMSYAGRP 330
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++++ +
Sbjct: 331 HSGLDDSKNIARIAVRMLQDGCQLRVNEK 359
>gi|57530089|ref|NP_001006450.1| 3'-5' exoribonuclease 1 [Gallus gallus]
gi|53130526|emb|CAG31592.1| hypothetical protein RCJMB04_8i1 [Gallus gallus]
Length = 327
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 26/208 (12%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN-K 163
D+ V+D E E I+EFPV++++ T+ D F ++V+P IN K
Sbjct: 106 DYICVVDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKP------EINPK 159
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
E G G+ + D A F +V+Q W+ Q L G T G+WD+
Sbjct: 160 LSEFCVGLTGITQDIVDKADTFPQVLQNVVDWMRQREL------GTKYSYCMLTDGSWDM 213
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSHH 282
+ QC+VS+IK P + +WIN++ + NFYK PR T +M M++ + G H
Sbjct: 214 SKFLNIQCRVSRIKHPSFAKKWINIRKSYGNFYKVPRNQ--TKLMIMLEKLGMSYDGRPH 271
Query: 283 LGIDDTKNITRVLQRMLADGARVQITAR 310
G+DD+KNI R+ RML DG ++++ +
Sbjct: 272 SGLDDSKNIARIAIRMLQDGCQLRVNEK 299
>gi|56758854|gb|AAW27567.1| SJCHGC03520 protein [Schistosoma japonicum]
Length = 201
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q +F+VLD E E I+EFPVLM++A T+ +FH +VRP+ IN
Sbjct: 5 QKFAYFMVLDFEATCEKDIKIPDPEIIEFPVLMVNAYTLHTESIFHHYVRPT------IN 58
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ + + +++ F+ +L +++L + AF TCG+W
Sbjct: 59 PVLSDFCTELTGIIQSMIEDEPELPSILKMFDLFLDKNNLKICPY-----KFAFVTCGDW 113
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
DLK +P QCK+ I +P F +WINLK V+ + MM M+ + G H
Sbjct: 114 DLKIMLPQQCKLLGIDVPDCFKQWINLKQVYCDV---MGQFPFSMMSMLAGLNIKHTGRH 170
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD +NI +L ++ GA IT
Sbjct: 171 HSGIDDCRNIANILCELIRCGATPDITGN 199
>gi|17541752|ref|NP_499887.1| Protein R02D3.8 [Caenorhabditis elegans]
gi|351064690|emb|CCD73172.1| Protein R02D3.8 [Caenorhabditis elegans]
Length = 266
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 39/274 (14%)
Query: 70 MCLYFTQGKCTMMDDVMHLEKF--------NHDISR-----DLQVDAAAFQHKCSQDLDF 116
M + FT+ ++D V H F ++ + + + K SQ D+
Sbjct: 1 MSINFTRTPRLLLDTVAHYSSFLESTKLVKTREVKKPPRYPNFSLKKDTKNQKMSQHFDY 60
Query: 117 FLVLDLEGKI------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
LVLD E EI+EFPV+ + + + FH++V+P++ + +
Sbjct: 61 LLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYVKPTECPR--LTSF 118
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
G + V LP +V+ +F++WL + EKG+ AF TCG+WDLK
Sbjct: 119 CTSLTGIIQ-EMVDEKPTLP--QVLSEFDSWLKEDSRLEKGK------FAFVTCGDWDLK 169
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+P++ K I +P YF +WIN+K A G+ ++ ++ G HH G
Sbjct: 170 VALPNEAKFKNIGIPEYFNQWINVKKASAEH---TNHFAKGIAQLLAIYKLQHQGRHHSG 226
Query: 285 IDDTKNITRVLQRMLADGARVQITARRNPDSRNV 318
IDD NI +++ + +G QIT ++ +R V
Sbjct: 227 IDDVANICEIVRCLGMNGHNYQITGSKDTMTRRV 260
>gi|268552995|ref|XP_002634480.1| Hypothetical protein CBG10739 [Caenorhabditis briggsae]
Length = 279
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 42/232 (18%)
Query: 111 SQDLDFFLVLDLEGKI------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
+Q D+ L+LD E EI+EFPV+ + + + FH++VRP++
Sbjct: 61 AQQFDYLLILDFEATCQENSLGPMLPVQEIIEFPVVQLSTSDWSEIRRFHQYVRPTECP- 119
Query: 159 QHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA 213
K F G+ + D V++ F+ W+ + EKG
Sbjct: 120 ---------KLSSFCTTLTGIIQEMVDDKPTISNVLENFDEWMKEDSRLEKGN------F 164
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMM 270
AF TCG+WDLK + ++ K +K+P YF +WIN+K + N + A GM ++
Sbjct: 165 AFVTCGDWDLKVALTNEAKFKNLKIPEYFTQWINVKKAYAAHTNHF------AKGMTQLL 218
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQYLF 322
K + G HH GIDD NI +++ + DG +IT+ N + + Q F
Sbjct: 219 KIYDLQHKGRHHSGIDDVANICEIVRCLGKDGHNYRITSSSNQTTASKQQRF 270
>gi|17541516|ref|NP_500418.1| Protein M02B7.2 [Caenorhabditis elegans]
gi|373937875|emb|CCD70202.1| Protein M02B7.2 [Caenorhabditis elegans]
Length = 266
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 123/274 (44%), Gaps = 39/274 (14%)
Query: 70 MCLYFTQGKCTMMDDVMHLEKFNHDI----SRDLQ---------VDAAAFQHKCSQDLDF 116
M + FT+ ++D V H F +RD++ V K SQ D+
Sbjct: 1 MSINFTRTPKLLLDKVAHYSSFVESTKLVKTRDVKKPPRYPSFSVKKPTKNQKISQHFDY 60
Query: 117 FLVLDLEGKI------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
LVLD E EI+EFPV+ + + + FH++++P++ + +
Sbjct: 61 LLVLDFEATCQDNWKGPMHPVQEIIEFPVVQLSTADWSEIRRFHQYIKPTEFPR--LTSF 118
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ + V LP EV+ +F++WL + ++G AF TCG+WDLK
Sbjct: 119 CTS-LTRIIQEMVDEKPKLP--EVLSEFDSWLKEDSRLKQGN------FAFVTCGDWDLK 169
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+P + K I++P YF +WIN+K + A GM ++ ++ G H G
Sbjct: 170 VALPSEAKFKNIEIPEYFNQWINVKKAYAEH---TNHFAKGMTQLLAIYKLQHQGRLHSG 226
Query: 285 IDDTKNITRVLQRMLADGARVQITARRNPDSRNV 318
IDD NI +++ + DG +IT ++ +R V
Sbjct: 227 IDDVANICEIVRCLGRDGHNYRITGSKDTMTRRV 260
>gi|301787585|ref|XP_002929208.1| PREDICTED: 3'-5' exoribonuclease 1-like [Ailuropoda melanoleuca]
Length = 349
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V++Q W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKQVIDWMKLKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|345487306|ref|XP_003425664.1| PREDICTED: ERI1 exoribonuclease 3-like [Nasonia vitripennis]
Length = 225
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 101/211 (47%), Gaps = 37/211 (17%)
Query: 114 LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
L LVLD E EI+EFP L++ + D FH +V+P
Sbjct: 23 LQNLLVLDFEATCVKDVILKPQEIIEFPCLVVSTEDWQVKDAFHEYVKPR---------- 72
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I K F G+ + + F EV +F +W+ + +++ ++AF TCG
Sbjct: 73 INPKLSDFCTELTGIMQETLENEEHFPEVFSKFCSWIEDGNYFDEK-----DKSAFVTCG 127
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF--YNFYKPRKSEATGMMGMMKNRQVPM 277
+WDLK +P QC++ I +P Y EWINLK F Y PR + M+++ +
Sbjct: 128 DWDLKVMLPSQCELDNINVPDYLKEWINLKSSFCLMTKYYPR-----SLADMLRHLNMKF 182
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G +H GIDD N+TRV+Q+ LAD + + T
Sbjct: 183 QGKNHCGIDDVHNMTRVIQK-LADKYKAEFT 212
>gi|281345321|gb|EFB20905.1| hypothetical protein PANDA_019321 [Ailuropoda melanoleuca]
Length = 311
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 90 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 149
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V++Q W+ L G + T G+W
Sbjct: 150 NLT--------GITQDQVDRADTFPQVLKQVIDWMKLKEL------GTKYKYCILTDGSW 195
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 196 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 254
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 255 HSGLDDSKNIARIAVRMLQDGCELRINEK 283
>gi|221132558|ref|XP_002167097.1| PREDICTED: 3'-5' exoribonuclease 1-like [Hydra magnipapillata]
Length = 287
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 102/201 (50%), Gaps = 27/201 (13%)
Query: 114 LDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+D+++V+D E EI+EFP +++ T+ V FH + RP IN
Sbjct: 94 VDYYVVIDFEATCDEPNPSGFQHEIIEFPAVLVKTSTLEIVSEFHSYCRPV------INP 147
Query: 164 YI-EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ E G+ +V +++ F+ V+Q+F+ WL Q + + AT G WD
Sbjct: 148 VLSEFCKSLTGITQVQVESSSVFEVVLQRFDKWLKQQVM-------PTETFCIATDGPWD 200
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
L + +QCK I++P YF W+N++ FYN+YK ++ M+ + + G H
Sbjct: 201 LDRFLKNQCKTLNIQIPHYFHRWVNIRKHFYNYYKINQANVELMLQHLG---MEFEGRPH 257
Query: 283 LGIDDTKNITRVLQRMLADGA 303
GIDD +NI R+L +++ DGA
Sbjct: 258 RGIDDARNIARILIQLIRDGA 278
>gi|341890887|gb|EGT46822.1| hypothetical protein CAEBREN_23366 [Caenorhabditis brenneri]
Length = 273
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
+ SQ L++ LVLD E EI+EFPV+ + A V FH++VRP++
Sbjct: 58 RMSQSLEYLLVLDFEATCQENARGPMQPVQEIIEFPVVQLRTSDWAEVRRFHQYVRPTEC 117
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
K G+ + D V++ F+AW+ + + G AF
Sbjct: 118 P-----KLTSFCTSLTGIIQEMVDRQPTLSAVLEDFDAWMKEDSRLKTGN------FAFV 166
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMMKNR 273
TCG+WDLK +P++ K I+ P Y +WIN+K + N + A GM ++K
Sbjct: 167 TCGDWDLKVALPNEAKFKNIQTPEYMKQWINVKKAYAAHTNHF------ARGMPELLKIY 220
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQYLFEDR 325
+ + G HH GIDD NI +++ + DG +IT + + ++ E R
Sbjct: 221 NLKLQGRHHSGIDDVANICEIVRCLGKDGHNYRITGSSDQPTTTRRFFREAR 272
>gi|410956121|ref|XP_003984693.1| PREDICTED: 3'-5' exoribonuclease 1 [Felis catus]
Length = 349
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKKVIDWMKSKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|66472518|ref|NP_001018450.1| 3'-5' exoribonuclease 1 [Danio rerio]
gi|63100708|gb|AAH95343.1| Exoribonuclease 1 [Danio rerio]
gi|182888732|gb|AAI64140.1| Eri1 protein [Danio rerio]
Length = 337
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 109/208 (52%), Gaps = 28/208 (13%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQH 160
D+ V+D E E I+EFP+++ID T+ VD F +V+P ++SE
Sbjct: 115 FDYICVVDFEATCEENNPPDYLHEIIEFPMVLIDTHTLEIVDSFQEYVKPVLHPQLSEFC 174
Query: 161 INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
+ G+ + D A F +V+++ +WL + L G + F T G+
Sbjct: 175 VKL--------TGITQEMVDEAKTFHQVLKRAISWLQEKEL------GTKYKYMFLTDGS 220
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGS 280
WD+ + QCK+S+I+ P + +WIN++ + NFYK +++ T ++ M++N + G
Sbjct: 221 WDMGKFLHTQCKLSRIRYPQFARKWINIRKSYGNFYKVPRTQ-TKLICMLENLGMEYDGR 279
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD++NI R+ ML DG ++++
Sbjct: 280 PHCGLDDSRNIARIAIHMLKDGCQLRVN 307
>gi|390361519|ref|XP_781221.3| PREDICTED: ERI1 exoribonuclease 3-like [Strongylocentrotus
purpuratus]
Length = 268
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD D+FLVLD E E++EFPVL + KT FH++V P
Sbjct: 74 QDFDYFLVLDFEATCLDNERIEPQEVIEFPVLKVSGKTFETEATFHQYVEPQVHGVGEFC 133
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ G D V F + ++ F W+ + L + + F TCG+WD
Sbjct: 134 TRLTG----ITPDMVKGQPT--FADTLKLFHVWMEKEGLVDPE-----VKFIFVTCGDWD 182
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMGMMKNRQVPMFGS 280
LKT P QC ++ YF W+N+K F + P+ GMM M++ +P G
Sbjct: 183 LKTMFPSQCAHFELPYHSYFRRWLNIKKAFATVTSHYPK-----GMMQMLERLNIPHVGR 237
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITARR 311
HH GIDD +NI +LQ + + + T R
Sbjct: 238 HHSGIDDCRNIANILQALALKRYKFKQTGSR 268
>gi|194226477|ref|XP_001915858.1| PREDICTED: 3'-5' exoribonuclease 1 [Equus caballus]
Length = 349
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 188 NLT--------GITQDLVDGADTFPQVLRKVVDWMKLKEL------GTKYKYSILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|341877999|gb|EGT33934.1| hypothetical protein CAEBREN_06895 [Caenorhabditis brenneri]
Length = 215
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 111 SQDLDFFLVLDLEGKI------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
SQ L++ LVLD E EI+EFPV+ + A + FH++VRP +
Sbjct: 2 SQSLEYLLVLDFEATCQENSKGPMQPVQEIIEFPVVQLRTSDWAEIRRFHQYVRPIECP- 60
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
K G+ + D V++ F+AW+ + + G AF TC
Sbjct: 61 ----KLTSFCTSLTGIIQEMVDGQPTLSAVLEDFDAWMKEDSRLKTGN------FAFVTC 110
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMMKNRQV 275
G+WDLK +P++ K I++P Y +WIN+K + N + A GM ++K +
Sbjct: 111 GDWDLKVALPNEAKFKNIQIPEYMKQWINVKKAYAAHTNHF------ARGMPELLKIYNL 164
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQYLFEDR 325
+ G HH GIDD NI +++ + DG +IT + + ++ E R
Sbjct: 165 KLQGRHHSGIDDVANICEIVRCLGKDGHNYRITGSSDQPTTTRRFFREAR 214
>gi|161612020|gb|AAI55978.1| hypothetical protein LOC548900 [Xenopus (Silurana) tropicalis]
gi|161612114|gb|AAI55988.1| hypothetical protein LOC548900 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 107/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPS---KMSEQHI 161
D+ V+D E E I+EFP+++++ T+ D+F R+VRP ++SE +
Sbjct: 124 DYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSEFCV 183
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D + F +V++ W+ + L G + A T G+W
Sbjct: 184 NL--------TGITQDIVDKSDIFPDVLRSVVDWMREKEL------GTKYKYAILTDGSW 229
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC+VS++K P + +WIN++ + NFYK +++ T + M++ + G
Sbjct: 230 DMSKFLNMQCRVSRLKYPRFAKKWINIRKSYGNFYKVPRTQ-TKLTTMLEKLGMTYDGRL 288
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ ML DG +++ R
Sbjct: 289 HSGVDDSKNIARIAAHMLQDGCELRVNER 317
>gi|152941094|gb|ABS44984.1| histone mRNA 3' end-specific exonuclease [Bos taurus]
Length = 349
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 188 NLT--------GITQDQVDKADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRVNEK 321
>gi|291236484|ref|XP_002738169.1| PREDICTED: CG7896-like [Saccoglossus kowalevskii]
Length = 1408
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 105/227 (46%), Gaps = 36/227 (15%)
Query: 95 ISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFV 144
I L+ D KC D+ +V+D E E I+EFPV++I++KT+
Sbjct: 1069 IKAGLESDDIINPVKCP--FDYLVVIDYEATCEKENPTDYVHEIIEFPVVLINSKTLKME 1126
Query: 145 DLFHRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQH 199
F F RP + K F G+ + D A F +V+ QFE WL
Sbjct: 1127 KEFRTFCRP----------VLHPKLSDFCTELTGITQAQVDGAPLFSDVLDQFENWL--- 1173
Query: 200 HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPR 259
E+ + G A T G WD+ + QC +SQI P Y WIN++ +F N+Y R
Sbjct: 1174 ---EENKLGSEYSFAIVTDGPWDIICFLNVQCVLSQISFPEYARRWINIRKLFSNYYHTR 1230
Query: 260 KSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
+ + T M+ + + G H GI D +NI R++ ++L DG +++
Sbjct: 1231 RLKLTLMLDHLG---MTFEGRQHSGIADCRNIARIMVKLLEDGCQIK 1274
>gi|328877052|gb|EGG25415.1| putative RNase III [Dictyostelium fasciculatum]
Length = 297
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 108/218 (49%), Gaps = 30/218 (13%)
Query: 112 QDLDFFLVLDLEG------KI---EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q + +VLD E KI E++EFP +++D + V F +VRP N
Sbjct: 59 QPFKYIVVLDFEATCDDGTKIKNQEVIEFPSVIVDVEKQQVVAQFAEYVRPV------YN 112
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT--CG 219
+ + G+ + D+A F+ V ++ +L+ + L ++ G + FA CG
Sbjct: 113 PTLSAFCTQLTGIQQATVDSADIFENVFKRHFKFLVDNKLLQEN-GARNEENPFAVLCCG 171
Query: 220 NWDLKTKVPDQCKVSQIK------LPP--YFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
+WDL +P QC++++ + LPP YF EWIN+K +F Y A GM M++
Sbjct: 172 DWDLLQMLPAQCRINKNESGELHYLPPPNYFTEWINVKKIFEKNYN---MSAYGMANMLR 228
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
+P+ G HH GIDD +NI+ ++ ML G +IT
Sbjct: 229 QLSIPLVGRHHSGIDDCRNISSIVIAMLKKGCLFEITT 266
>gi|291000550|ref|XP_002682842.1| predicted protein [Naegleria gruberi]
gi|284096470|gb|EFC50098.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 105/213 (49%), Gaps = 21/213 (9%)
Query: 106 FQHKCSQDLDFFLVLDLEGK----IEILEFPVLMI---DAKTMAFVDLFHRFVRPSKMSE 158
F++ C D + D + +EI+EFP +++ K + VD +V+ +
Sbjct: 1 FKYICVLDFEAVFADDCKTNRNYDMEIIEFPSVLLKFESEKQLVVVDEIQNYVKTRR--- 57
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
I K E G+ + ++ + F+E +++ WL+ H L EK ++ ATC
Sbjct: 58 --IPKINEECTKLTGITQEMVESGVSFEEALKRHNEWLMSH-LGEKPTKDNI---LMATC 111
Query: 219 GNWDLKTKVPDQC---KVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
G+WDLKT +P Q K + + +F +W N+KDVF FY K GM+ M+ ++
Sbjct: 112 GDWDLKTMIPHQVFFEKQTISLIGSHFTQWCNVKDVFAKFYNMEK--VNGMLTMLNALKL 169
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
P+ G HH GIDD KNI RV+ +M G T
Sbjct: 170 PLLGKHHSGIDDCKNIARVVCKMAQQGCHFNAT 202
>gi|335307056|ref|XP_003360688.1| PREDICTED: 3'-5' exoribonuclease 1-like [Sus scrofa]
Length = 525
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 304 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 363
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L K + + T G+W
Sbjct: 364 NLT--------GITQDQVDKADTFPQVLKKVIDWMKLKELGTK------YKYSILTDGSW 409
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 410 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 468
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 469 HSGLDDSKNIARIAVRMLQDGCELRVNEK 497
>gi|84000359|ref|NP_001033281.1| 3'-5' exoribonuclease 1 [Bos taurus]
gi|81673840|gb|AAI09682.1| Three prime histone mRNA exonuclease 1 [Bos taurus]
gi|296472395|tpg|DAA14510.1| TPA: three prime histone mRNA exonuclease 1 [Bos taurus]
Length = 349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 188 NLT--------GITQDQVDKADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRVNEK 321
>gi|440896880|gb|ELR48688.1| 3'-5' exoribonuclease 1 [Bos grunniens mutus]
Length = 349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 188 NLT--------GITQDQVDKADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRVNEK 321
>gi|393907515|gb|EFO17571.2| exonuclease [Loa loa]
Length = 267
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 23/210 (10%)
Query: 112 QDLDFFLVLDLEG------KI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q+ D+FLVLD E KI EI+EFPV+ + K + + FHR+V+P+ E+ I
Sbjct: 57 QNFDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEISRFHRYVKPT---ERPI 113
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + V +LP EV+ F+ WLI +L F TCG+W
Sbjct: 114 LTSFCTELTGIVQETVASQESLP--EVLDAFDKWLINSNLINADHSMK-SHFTFITCGDW 170
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVF--YNFYKPRKSEATGMMGMMKNRQVPMFG 279
DL +P + +KLP YF WINLK F +N Y A + M+ + ++ G
Sbjct: 171 DLGVLLPSEANYRNLKLPDYFKRWINLKKAFCKWNGYF-----AKSLTVMLHDLELNHLG 225
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITA 309
H GIDD +N+ ++ + + G Q T+
Sbjct: 226 RLHSGIDDVRNMCQITRSLAKSGCVFQNTS 255
>gi|73979366|ref|XP_539997.2| PREDICTED: 3'-5' exoribonuclease 1 [Canis lupus familiaris]
Length = 349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPELNTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|355686523|gb|AER98084.1| exoribonuclease 1 [Mustela putorius furo]
Length = 348
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|431902290|gb|ELK08791.1| 3'-5' exoribonuclease 1 [Pteropus alecto]
Length = 349
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTNTLEIEDTFQQYVRPEVNTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMGYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|426256336|ref|XP_004021796.1| PREDICTED: LOW QUALITY PROTEIN: 3'-5' exoribonuclease 1 [Ovis
aries]
Length = 337
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 109/209 (52%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 116 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 175
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 176 NLT--------GITQDQVDKADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSW 221
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 222 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 280
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 281 HSGLDDSKNIARIAVRMLQDGCELRVNEK 309
>gi|340720676|ref|XP_003398758.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Bombus terrestris]
Length = 623
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 26/198 (13%)
Query: 112 QDLDFFLVLDLE------GKI---EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q ++ LVLD E KI EI+EFP + + ++FH +++P K Q
Sbjct: 411 QSFNYLLVLDFECTCKKYEKIDPQEIIEFPCAAVSTTSWEVENVFHEYIKP-KYHPQLTP 469
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
E G+ + D L F EV F WL +H ++ G +AF TCG+WD
Sbjct: 470 FCTELT----GIIQDLVDNQLYFPEVFGTFCNWLEEHKYFKDGNN-----SAFVTCGDWD 520
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMGMMKNRQVPMFGS 280
LK +P QC++ I LP FM+WINLK F + + PR + M+ + +P+ G
Sbjct: 521 LKFMLPSQCELENISLPKQFMKWINLKGSFCDATDHYPR-----NLTDMLSHLNLPLVGK 575
Query: 281 HHLGIDDTKNITRVLQRM 298
H GI D KN+ +++Q +
Sbjct: 576 LHSGISDVKNMVQIIQAL 593
>gi|449270665|gb|EMC81322.1| 3'-5' exoribonuclease 1, partial [Columba livia]
Length = 312
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 30/210 (14%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPS---KMSEQHI 161
D+ V+D E E I+EFPV++++ +T+ D F ++V+P K+S I
Sbjct: 91 DYICVVDFEATCEEGNPPEFVHEIIEFPVVLLNTRTLEIEDTFQQYVKPEINPKLSNFCI 150
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+Q W+ Q WE G + T G+W
Sbjct: 151 NL--------TGITQEVVDKADTFPQVLQNVIEWMRQ---WELGTKYTY---SMLTDGSW 196
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGS 280
D+ + QC++S+IK P + +WIN++ + NFYK PR T + M++ + G
Sbjct: 197 DMSKFLNIQCRISRIKYPSFAKKWINIRKSYGNFYKVPRNQ--TKLTIMLEQLGMNYDGR 254
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 255 PHSGLDDSKNIARIAIRMLQDGCELRVNEQ 284
>gi|344281397|ref|XP_003412466.1| PREDICTED: 3'-5' exoribonuclease 1-like [Loxodonta africana]
Length = 388
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFP+++++ T+ D F ++VRP +++S+ I
Sbjct: 167 DYICIIDFEATCEEGNPPEFIHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 226
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 227 NLT--------GITQDQVDRADTFPQVLKKVTDWMKLKEL------GTKYKYSILTDGSW 272
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S+++ PP+ WIN++ + NFYK +S+ T + M++ + G
Sbjct: 273 DMNKFLNIQCQLSRLRYPPFAKRWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMSYEGRP 331
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 332 HSGLDDSKNIARIAVRMLQDGCELRVNEK 360
>gi|291409160|ref|XP_002720873.1| PREDICTED: histone mRNA 3 end-specific exonuclease-like
[Oryctolagus cuniculus]
Length = 344
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 123 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEANTQLSDFCI 182
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 183 NLT--------GITQDQVDKADTFPQVLRKVIDWMKLKEL------GTKYKYCILTDGSW 228
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 229 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 287
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 288 HSGLDDSKNIARIAVRMLQDGCELRINEK 316
>gi|397467350|ref|XP_003805385.1| PREDICTED: 3'-5' exoribonuclease 1 [Pan paniscus]
Length = 345
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 124 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 173
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 174 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDG 227
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 228 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 286
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 287 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 317
>gi|45476845|sp|Q7TMF2.2|ERI1_MOUSE RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5'
exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName:
Full=Histone mRNA 3'-exonuclease 1
gi|28204890|gb|AAH46412.1| Exoribonuclease 1 [Mus musculus]
gi|74179153|dbj|BAE42771.1| unnamed protein product [Mus musculus]
gi|148703505|gb|EDL35452.1| three prime histone mRNA exonuclease 1 [Mus musculus]
Length = 345
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++SE I
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNAQLSEFCI 183
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
G G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 184 --------GLTGITQDQVDRADAFPQVLKKVIEWMKSKEL------GTKYKYCILTDGSW 229
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 230 DMSKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 288
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 289 HSGLDDSKNIARIAVRMLQDGCELRINEK 317
>gi|354471547|ref|XP_003498003.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cricetulus griseus]
Length = 319
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP S++S+ +
Sbjct: 98 DYICIIDFEATCEEGNPAEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNSQLSDFCV 157
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 158 SLT--------GITQDQVDRADAFPQVLRKVIEWMKSKEL------GTKYKYCILTDGSW 203
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 204 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 262
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 263 HSGLDDSKNIARIAVRMLQDGCELRINEK 291
>gi|426358763|ref|XP_004046664.1| PREDICTED: 3'-5' exoribonuclease 1 [Gorilla gorilla gorilla]
Length = 349
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|62079013|ref|NP_001014165.1| 3'-5' exoribonuclease 1 [Rattus norvegicus]
gi|78098993|sp|Q5FVR4.1|ERI1_RAT RecName: Full=3'-5' exoribonuclease 1; AltName: Full=Histone mRNA
3'-exonuclease 1
gi|58476450|gb|AAH89828.1| Three prime histone mRNA exonuclease 1 [Rattus norvegicus]
gi|149057952|gb|EDM09195.1| three prime histone mRNA exonuclease 1 [Rattus norvegicus]
Length = 345
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 107/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ ++ D F ++VRP S++SE I
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHSLEIEDTFQQYVRPEVNSQLSEFCI 183
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
G G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 184 --------GLTGITQDQVDRADAFPQVLKKVIEWMKSKEL------GTKYKYCILTDGSW 229
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 230 DMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 288
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 289 HSGLDDSKNIARIAVRMLQDGCELRINEK 317
>gi|343958098|dbj|BAK62904.1| histone mRNA 3'-exonuclease 1 [Pan troglodytes]
Length = 271
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 50 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 99
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 100 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIEWMKLKEL------GTKYKYSLLTDG 153
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 154 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 212
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 213 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 243
>gi|344240333|gb|EGV96436.1| 3'-5' exoribonuclease 1 [Cricetulus griseus]
Length = 279
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP S++S+ +
Sbjct: 58 DYICIIDFEATCEEGNPAEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEVNSQLSDFCV 117
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 118 SLT--------GITQDQVDRADAFPQVLRKVIEWMKSKEL------GTKYKYCILTDGSW 163
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 164 DMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 222
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 223 HSGLDDSKNIARIAVRMLQDGCELRINEK 251
>gi|209154444|gb|ACI33454.1| Histone mRNA 3-exonuclease 1 [Salmo salar]
Length = 346
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFP+++++ T+ D F +VRP +N
Sbjct: 125 DYICVVDFEATCEQDNPADFTHEIIEFPMVLLNTHTLEIEDTFQEYVRP------EVNTQ 178
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ K G+ + D A F +V++Q WL + L G + T G+WD+
Sbjct: 179 LSEFCVKLTGITQKMVDDADTFPDVLEQVVLWLQEKEL------GTKYKYTLLTDGSWDM 232
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC+++ ++ P + +WIN+K ++ NFYK +++ T + M++ + G H
Sbjct: 233 SKFMNTQCRLNSLRYPQFAKKWINIKKLYGNFYKVPRTQ-TKLSSMLEKLGLKYEGRPHS 291
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD++NI + RML DG +++I R
Sbjct: 292 GLDDSRNIAHIAMRMLQDGCQLRINER 318
>gi|114623463|ref|XP_001136735.1| PREDICTED: 3'-5' exoribonuclease 1 isoform 1 [Pan troglodytes]
gi|410057587|ref|XP_003954240.1| PREDICTED: 3'-5' exoribonuclease 1 [Pan troglodytes]
gi|410216504|gb|JAA05471.1| exoribonuclease 1 [Pan troglodytes]
gi|410253534|gb|JAA14734.1| exoribonuclease 1 [Pan troglodytes]
gi|410287450|gb|JAA22325.1| exoribonuclease 1 [Pan troglodytes]
gi|410333459|gb|JAA35676.1| exoribonuclease 1 [Pan troglodytes]
Length = 349
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|297682312|ref|XP_002818868.1| PREDICTED: 3'-5' exoribonuclease 1 [Pongo abelii]
Length = 349
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|340369543|ref|XP_003383307.1| PREDICTED: 3'-5' exoribonuclease 1-like [Amphimedon queenslandica]
Length = 301
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 98/204 (48%), Gaps = 26/204 (12%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
L F LVLD E E I+EFPV ++D T+ VD FH + RP +N+
Sbjct: 97 LKFLLVLDFEATCESVNSSDYIHEIIEFPVQLLDISTLKIVDTFHSYCRPC------LNE 150
Query: 164 YIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ K G+++ D A F EV F W+ + L G + T WD
Sbjct: 151 KLSSFCTKLTGIEQSIVDKAPTFAEVFDDFTEWMEEREL------GTKHNFSLVTDCPWD 204
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
++ + QC +S++ P Y +WI+ + +F +FY + + + M+ + G H
Sbjct: 205 IRECLFPQCALSKVSFPHYASKWIDARKLFSSFY---QISSGNLANMLTQLGMSFEGREH 261
Query: 283 LGIDDTKNITRVLQRMLADGARVQ 306
G+DD+KNI R++ ++++DG +Q
Sbjct: 262 SGLDDSKNIARIVSQLISDGCTLQ 285
>gi|62859267|ref|NP_001016146.1| exoribonuclease 1 [Xenopus (Silurana) tropicalis]
gi|89268181|emb|CAJ81479.1| exonuclease 1 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPS---KMSEQHI 161
D+ V+D E E I+EFP+++++ T+ D+F R+VRP ++SE +
Sbjct: 124 DYICVIDFEATCEEGNSTDYTHEIIEFPIVLLNTHTLEIEDVFQRYVRPEINPQLSEFCV 183
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D + F +V++ W+ + L G + A T G+W
Sbjct: 184 NL--------TGITQDIVDKSDIFPDVLRSVVDWMREKEL------GTKYKYAILTDGSW 229
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC+VS++K P + +WIN+ + NFYK +++ T + M++ + G
Sbjct: 230 DMSKFLNMQCRVSRLKYPRFAKKWINICKSYGNFYKVPRTQ-TKLTTMLEKLGMTYDGRL 288
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ ML DG +++ R
Sbjct: 289 HSGVDDSKNIARIAAHMLQDGCELRVNER 317
>gi|158255560|dbj|BAF83751.1| unnamed protein product [Homo sapiens]
gi|261858590|dbj|BAI45817.1| exoribonuclease 1 [synthetic construct]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|31543184|ref|NP_699163.2| 3'-5' exoribonuclease 1 [Homo sapiens]
gi|45476938|sp|Q8IV48.3|ERI1_HUMAN RecName: Full=3'-5' exoribonuclease 1; AltName: Full=3'-5'
exonuclease ERI1; AltName: Full=Eri-1 homolog; AltName:
Full=Histone mRNA 3'-end-specific exoribonuclease;
AltName: Full=Histone mRNA 3'-exonuclease 1; AltName:
Full=Protein 3'hExo; Short=HEXO
gi|23271401|gb|AAH35279.1| Exoribonuclease 1 [Homo sapiens]
gi|33520761|gb|AAQ21219.1| 3' exoribonuclease [Homo sapiens]
gi|119585973|gb|EAW65569.1| three prime histone mRNA exonuclease 1, isoform CRA_b [Homo
sapiens]
gi|119585974|gb|EAW65570.1| three prime histone mRNA exonuclease 1, isoform CRA_b [Homo
sapiens]
gi|123979876|gb|ABM81767.1| three prime histone mRNA exonuclease 1 [synthetic construct]
gi|123994641|gb|ABM84922.1| three prime histone mRNA exonuclease 1 [synthetic construct]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|380790199|gb|AFE66975.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
gi|383422639|gb|AFH34533.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
gi|384944050|gb|AFI35630.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|355779519|gb|EHH63995.1| 3'-5' exoribonuclease 1 [Macaca fascicularis]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|355697746|gb|EHH28294.1| 3'-5' exoribonuclease 1 [Macaca mulatta]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|165905605|ref|NP_080343.4| 3'-5' exoribonuclease 1 [Mus musculus]
gi|26380424|dbj|BAB29333.2| unnamed protein product [Mus musculus]
gi|74228094|dbj|BAE38007.1| unnamed protein product [Mus musculus]
Length = 345
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP +N
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRP------EVNDQ 177
Query: 165 I-EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ E G G+ + D A F +V+++ W+ L G + T G+WD+
Sbjct: 178 LSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKEL------GTKYKYCILTDGSWDM 231
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC++S++K P + +WIN++ + NFYK +S+ T + M++ + G H
Sbjct: 232 SKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHS 290
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD+KNI R+ RML DG ++I +
Sbjct: 291 GLDDSKNIARIAIRMLQDGCELRINEK 317
>gi|432117301|gb|ELK37688.1| 3'-5' exoribonuclease 1 [Myotis davidii]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 107/210 (50%), Gaps = 30/210 (14%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTGTLEIEDTFQQYVRPEVNTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGS 280
D+ + QC++S++K PP+ +WIN++ + NFYK PR T + M++ + G
Sbjct: 234 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFYKVPRGQ--TKLTIMLEKLGMDYDGR 291
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 292 PHSGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|332244613|ref|XP_003271468.1| PREDICTED: 3'-5' exoribonuclease 1 [Nomascus leucogenys]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RLHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|402877563|ref|XP_003902493.1| PREDICTED: 3'-5' exoribonuclease 1 [Papio anubis]
Length = 349
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 321
>gi|170590708|ref|XP_001900113.1| exonuclease family protein [Brugia malayi]
gi|158592263|gb|EDP30863.1| exonuclease family protein [Brugia malayi]
Length = 399
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 106/209 (50%), Gaps = 15/209 (7%)
Query: 107 QHKCSQDLDFFLVLD---LEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ CSQ +DF + + EI+EFP +++D + VD+FH +VRP ++ +++
Sbjct: 142 NYDCSQVIDFECTCEADLYDYNHEIIEFPAVLVDVRKKEIVDVFHSYVRP--LANPQLSE 199
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G+ + D ALPF +V+ F W+ H L G + R AF T G WD+
Sbjct: 200 FCSAFT---GITQEMIDKALPFIDVLDSFRTWMQLHRL-----GQNDMRYAFVTDGPWDI 251
Query: 224 KTKVPDQCKVSQIKLPPY-FMEWINLKDVFYNFY-KPRKSEATGMMGMMKNRQVPMFGSH 281
QC S++ P+ F +IN++ F N Y K + + GM+ + G
Sbjct: 252 AKFFQMQCIQSKLNTVPHDFRFYINIRRSFANKYCKKYSMQKINLGGMLTFLNMKFEGRE 311
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R++ +ML D + +++ +
Sbjct: 312 HSGLDDSKNIARIVIKMLEDRSELRVNEK 340
>gi|26379605|dbj|BAB29127.2| unnamed protein product [Mus musculus]
Length = 345
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 105/207 (50%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP +N
Sbjct: 124 DYICIIDFEATCEEGNPAEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRP------EVNDQ 177
Query: 165 I-EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ E G G+ + D A F +V+++ W+ L G + T G+WD+
Sbjct: 178 LSEFCIGLTGITQDQVDRADAFPQVLKKVIEWMKSKEL------GTKYKYCILTDGSWDM 231
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC++S++K P + +WIN++ + NFYK +S+ T + M++ + G H
Sbjct: 232 SKFLSIQCRLSRLKHPAFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHS 290
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD+KNI R+ RML DG ++I +
Sbjct: 291 GLDDSKNIARIAIRMLQDGCELRINEK 317
>gi|417399372|gb|JAA46706.1| Putative 3'-5' exoribonuclease 1 [Desmodus rotundus]
Length = 349
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFLHEIIEFPVVLLNTHTLEIEDTFQQYVRPEMNAQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + T G+W
Sbjct: 188 NLT--------GITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 234 DMSKFLHIQCQLSKLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 293 HSGLDDSKNIARIAVRMLQDGCELRVNEK 321
>gi|119585972|gb|EAW65568.1| three prime histone mRNA exonuclease 1, isoform CRA_a [Homo
sapiens]
Length = 288
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 105/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 67 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 116
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + + T G
Sbjct: 117 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSLLTDG 170
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 171 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 229
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 230 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 260
>gi|321468566|gb|EFX79550.1| hypothetical protein DAPPUDRAFT_4269 [Daphnia pulex]
Length = 199
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 22/208 (10%)
Query: 114 LDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+F+++D EG EI+EFP ++++ + D FH F +P +N
Sbjct: 2 FDYFVIIDFEGTCGFLKNPCGIQEIIEFPAILLNGHNGSIEDEFHSFCQPV------LNP 55
Query: 164 YIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ K G+ + D A FK+V FE WL ++ + G A T D
Sbjct: 56 SLTNFCKKLTGITQDAVDKAPLFKDVFVSFEEWLKKNKVI-----GSYYSFAVVTDDPND 110
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
++ + QC++S+I P Y WIN+K +F +FYK + + M+++ G H
Sbjct: 111 IRQFLQKQCRISEIDFPTYCQNWINIKIIFAHFYKNGNMQCLSLKNMIRDIGCEFQGRAH 170
Query: 283 LGIDDTKNITRVLQRMLADGARVQITAR 310
GIDD +NI ++QR+LAD A + +
Sbjct: 171 SGIDDARNIASIVQRLLADRAPITFNEK 198
>gi|196009752|ref|XP_002114741.1| hypothetical protein TRIADDRAFT_28382 [Trichoplax adhaerens]
gi|190582803|gb|EDV22875.1| hypothetical protein TRIADDRAFT_28382 [Trichoplax adhaerens]
Length = 276
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 25/203 (12%)
Query: 115 DFFLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D++ V+D E K EI+EFP LM++A+T+A FH + RP +N
Sbjct: 79 DYYCVIDFEATCEEVNPRKYKHEIIEFPALMVNARTLAVESQFHFYCRPV------MNPK 132
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ K G+D+ D+A FK V Q F+ WL + L E T G +D+
Sbjct: 133 LSSFCTKLTGIDQKTIDSADAFKVVFQNFQKWL-EDVLGEST-------FVVVTDGPFDI 184
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QCKV +I +P + W NLK F FYK + M+ ++P G H
Sbjct: 185 TRFLTIQCKVDKIPMPYWASNWTNLKRTFKAFYKLSGQRFPTLQDMLGALKIPHDGRLHS 244
Query: 284 GIDDTKNITRVLQRMLADGARVQ 306
GIDD KNI ++L +++ DG +V+
Sbjct: 245 GIDDAKNIAKILCQLIRDGCQVK 267
>gi|147900544|ref|NP_001089554.1| exoribonuclease 1 [Xenopus laevis]
gi|67678439|gb|AAH97876.1| Thex1 protein [Xenopus laevis]
Length = 348
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 37/235 (15%)
Query: 89 EKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIE----------ILEFPVLMIDA 138
+K H + +D D D+ V+D E E I+EFP+++++
Sbjct: 110 QKLTHALHKDSNTDCY---------YDYICVIDFEATCEAGNSLDYPHEIIEFPIVLLNT 160
Query: 139 KTMAFVDLFHRFVRPS---KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAW 195
T+ D+F +VRP ++SE +N G+ + D + F V++ W
Sbjct: 161 HTLEIEDVFQCYVRPEINPQLSEFCVNL--------TGITQDTVDKSDTFPNVLRSVVEW 212
Query: 196 LIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF 255
+ + L G + A T G+WD+ + QC++S++K P + +WIN++ + NF
Sbjct: 213 MREKEL------GSKYKYAILTDGSWDMSKFLNMQCRISRLKYPRFAKKWINIRKSYGNF 266
Query: 256 YKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
YK +++ T + M++ + G H G+DD+KNI R+ ML DG +++ R
Sbjct: 267 YKVPRTQ-TKLTTMLEKLGMTYNGRLHSGLDDSKNIARIAAHMLQDGCELRVNER 320
>gi|387015830|gb|AFJ50034.1| 3'-5' exoribonuclease 1-like [Crotalus adamanteus]
Length = 338
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 101/187 (54%), Gaps = 18/187 (9%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPS---KMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
EI+EFP+++++ +T+ D F ++V+P ++S+ IN G+ + + A
Sbjct: 140 EIIEFPIVLLNTQTLQIEDTFQQYVKPEINPQLSDFCINLT--------GISQELVEKAD 191
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
F +V+Q+ W+ Q L G + T G+WD+ + QC++S++K P +
Sbjct: 192 EFPKVLQRVVDWMKQKEL------GSKYSYSILTDGSWDMSKFLNIQCRISRLKYPSFAK 245
Query: 244 EWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGA 303
+WIN++ + NFYK + + T + M++ + G H G+DD+KNI R+ RML DG
Sbjct: 246 KWINIRKSYGNFYKVPRCQ-TKLSTMLEKLGMDYDGRPHSGLDDSKNIARIAIRMLQDGC 304
Query: 304 RVQITAR 310
+++ R
Sbjct: 305 ELRVNER 311
>gi|449508749|ref|XP_002190758.2| PREDICTED: ERI1 exoribonuclease 3 [Taeniopygia guttata]
Length = 278
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 126/286 (44%), Gaps = 25/286 (8%)
Query: 38 TCAQHISCSCSASSSSSSSSTHQKGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISR 97
C ++S S + +S S + + P L ++ + + LE F +SR
Sbjct: 3 VCMSNMSISSVSDASGCSMIALLHTGAANFPPNLLSRSRQAVSPLFPAGVLEGFRSIVSR 62
Query: 98 DLQ-----VDAAAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFV 144
L AA Q +FLVLD E EI+EFP+L ++ +TM
Sbjct: 63 KLASHGFGASMAAMSSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIE 122
Query: 145 DLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK 204
FH +V+P + + + G + + D ++V+++ + W+ + L +
Sbjct: 123 STFHMYVQP--VVHPQLTPFCTELTG---IIQGMVDGQPSLQQVLERVDEWMAKEGLLDP 177
Query: 205 GRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEAT 264
++ F TCG+WDLK +P QC+ + + YF +WINLK Y+F +
Sbjct: 178 SV-----KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGSWPK-N 230
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G++ M K + G H GIDD KNI +++ + G + T++
Sbjct: 231 GLLDMNKGLNLQHIGRPHSGIDDCKNIANIMKTLAHRGFIFKQTSK 276
>gi|443697836|gb|ELT98134.1| hypothetical protein CAPTEDRAFT_225969 [Capitella teleta]
Length = 212
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 111 SQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q+ D+FLVLD E EI+EFPVL ++AKT FH++V P ++ +Q
Sbjct: 15 EQNFDYFLVLDFEATCDDKVQVDPQEIIEFPVLKVNAKTFEVESTFHQYVEP-RVHKQLS 73
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+E G+ + D + V+ F+ W+ L +G + F TCG+W
Sbjct: 74 PFCVELT----GIIQDMVDGQQHLEAVLGDFQKWMQDEGLLNEGV-----KFIFVTCGDW 124
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
DLK +P Q K I P + WIN+K F + + MM M++ + G H
Sbjct: 125 DLKKMLPSQAKYFDIAYPDHMKSWINIKRPFTDVVG--QYPKNDMMEMLQKLNIAHTGRH 182
Query: 282 HLGIDDTKNITRVLQRMLADG 302
H GIDD KNI ++L+ + G
Sbjct: 183 HSGIDDCKNIAKILRGIALKG 203
>gi|226481597|emb|CAX73696.1| three prime histone mRNA exonuclease 1 [Schistosoma japonicum]
Length = 582
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 37/216 (17%)
Query: 115 DFFLVLDLEGKIE--------------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
D+ L++DLE E I+EFP+L+ + + V +FH + +P
Sbjct: 299 DYLLIIDLEATCESKEKIINDIDYPHEIIEFPILLYNTRLRKCVSVFHAYCKPR------ 352
Query: 161 INKYIEGKYGKFGVD-----RVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ +F D ++ D ALPF V+ Q E WL++ H + KR A
Sbjct: 353 ----LHPNLSEFCTDLTQIQQIQVDNALPFSNVLLQVEEWLLKRHKLTQ------KRCAI 402
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQ 274
D+ + QC+++ I LP + WINL F FYK P + T + GM+ +
Sbjct: 403 VCDCCADMSKFMRIQCRLANISLPNWCKIWINLSKSFRAFYKFPSRYRVT-LNGMLHDLG 461
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G H G+DD NI R+++ +L+DG +++ R
Sbjct: 462 LSFVGQRHRGLDDAVNILRIVRVLLSDGCSLRVNER 497
>gi|226481595|emb|CAX73695.1| three prime histone mRNA exonuclease 1 [Schistosoma japonicum]
Length = 582
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 37/216 (17%)
Query: 115 DFFLVLDLEGKIE--------------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
D+ L++DLE E I+EFP+L+ + + V +FH + +P
Sbjct: 299 DYLLIIDLEATCESKEKIINDIDYPHEIIEFPILLYNTRLRKCVSVFHAYCKPR------ 352
Query: 161 INKYIEGKYGKFGVD-----RVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ +F D ++ D ALPF V+ Q E WL++ H + KR A
Sbjct: 353 ----LHPNLSEFCTDLTQIQQIQVDNALPFSNVLLQVEEWLLKRHKLTQ------KRCAI 402
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQ 274
D+ + QC+++ I LP + WINL F FYK P + T + GM+ +
Sbjct: 403 VCDCCADMSKFMRIQCRLANISLPNWCKIWINLSKSFRAFYKFPSRYRVT-LNGMLHDLG 461
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G H G+DD NI R+++ +L+DG +++ R
Sbjct: 462 LSFVGQRHRGLDDAVNILRIVRVLLSDGCSLRVNER 497
>gi|307191666|gb|EFN75140.1| Prion protein-interacting protein [Harpegnathos saltator]
Length = 225
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 96/205 (46%), Gaps = 34/205 (16%)
Query: 109 KCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
K +Q+ ++ LV+D E E I+E P ++ + D+FH +++P
Sbjct: 7 KITQNFEYLLVMDFEATCEKHQPLKPQEIIELPCAVLSTRDWKLKDVFHEYIKP------ 60
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHL---KRAAF 215
++ + + G+ + D F +V F WL +GG+ ++ F
Sbjct: 61 RVHPILTPFCTELTGIIQDIVDNQPYFPDVFSNFCEWL--------TKGGYFDESNKSTF 112
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMGMMKNR 273
TCGNWDLK +P QCK+ I LP F +WI+LK F F Y PR + M+
Sbjct: 113 VTCGNWDLKVMLPSQCKLDGITLPDQFKQWIDLKHTFSEFSMYYPR-----SLPDMLTRL 167
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRM 298
+P+ G H GIDD KN+ ++Q +
Sbjct: 168 NIPLQGRLHSGIDDVKNMVAIIQTL 192
>gi|390370627|ref|XP_001187567.2| PREDICTED: 3'-5' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 419
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 115 DFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D+E EI+EFP+++++ KT+ D F F +P
Sbjct: 224 DYLCVIDVEATCQEINPVDYIHEIIEFPIVLLNTKTLQIEDTFDAFCKP----------V 273
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + KF + + D A F V+++ E W+ Q L G A AT
Sbjct: 274 INPQLSKFCSQLTNISQKMVDKADEFPTVLEKAERWMRQKGL------GSKHSFAIATDC 327
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+ D+ + QC VS+I P Y EW+N+ VF N YK ++ + M+ + + G
Sbjct: 328 SLDMDLYLKLQCLVSEISYPQYAKEWVNISKVFANLYKTKR---LPLRAMLDSTGLAFIG 384
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
H GIDD +NI RV +++ DGA ++ R P
Sbjct: 385 QPHRGIDDARNIARVALQLIEDGAEMKYNERLTP 418
>gi|296221910|ref|XP_002756956.1| PREDICTED: 3'-5' exoribonuclease 1 [Callithrix jacchus]
Length = 348
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 127 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 176
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F V+++ W+ L G + + T G
Sbjct: 177 INTRLSDFCISLTGITQDQVDRADTFPHVLKKVIDWMKLKEL------GTKYKYSILTDG 230
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S+IK P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 231 SWDMSKFLNIQCQISRIKYPSFAKKWINIRKSYGNFYKVPRSQ-TKLAIMLEKLGMDYDG 289
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 290 RPHCGLDDSKNIARIAVRMLQDGCELRINEK 320
>gi|390347745|ref|XP_796324.3| PREDICTED: 3'-5' exoribonuclease 1-like [Strongylocentrotus
purpuratus]
Length = 419
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 98/214 (45%), Gaps = 34/214 (15%)
Query: 115 DFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D+E EI+EFP+++++ KT+ D F F +P
Sbjct: 224 DYLCVIDVEATCQEINPVDYIHEIIEFPIVLLNTKTLQIEDTFDAFCKP----------V 273
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + KF + + D A F V+++ E W+ Q L G A AT
Sbjct: 274 INPQLSKFCSQLTNISQKMVDKADEFPTVLEKAERWMRQKGL------GSKHSFAIATDC 327
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+ D+ + QC VS+I P Y EW+N+ VF N YK ++ + M+ + + G
Sbjct: 328 SLDMDLYLKLQCLVSEIPYPQYAKEWVNISKVFANLYKTKR---LPLRAMLDSTGLAFIG 384
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
H GIDD +NI RV +++ DGA ++ R P
Sbjct: 385 QPHRGIDDARNIARVALQLIEDGAEMKYNERLTP 418
>gi|307169180|gb|EFN61996.1| Prion protein-interacting protein [Camponotus floridanus]
Length = 236
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 93/210 (44%), Gaps = 42/210 (20%)
Query: 108 HKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q ++ LV+D E EI+E P + + D FH ++RP
Sbjct: 18 QKIVQKFEYLLVMDFEATCDKQVTLQPQEIIELPCVALSTSDWKLKDTFHAYIRPR---- 73
Query: 159 QHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA 213
+ K F G+ + D F +V +F WLI+ GG+ R+
Sbjct: 74 ------VYPKLTPFCIELTGIMQEMVDDQPCFADVFSKFRKWLIE--------GGYFDRS 119
Query: 214 ---AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMMG 268
+F TCGNWDLKT +P+QC + I LP F +WI LK F + Y PR +
Sbjct: 120 DKSSFVTCGNWDLKTMLPNQCNLDNITLPDEFKQWIELKHTFCDSTGYYPR-----SLKD 174
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRM 298
M+ + M G H GIDD KN+ ++Q +
Sbjct: 175 MLTRLDLSMQGRLHSGIDDVKNMVSIIQAL 204
>gi|427781641|gb|JAA56272.1| Putative eri1 exoribonuclease 3 [Rhipicephalus pulchellus]
Length = 256
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 35/206 (16%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+FL+LD E EI+EFPVL ++ +T FH +V+P + +
Sbjct: 67 QAYDYFLMLDFEATCSAEKGVPTPQEIIEFPVLKVNGRTFETESTFHTYVQPQ--AHPQL 124
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G D V D +EV+ +F+ W+ + L + R F T G+W
Sbjct: 125 TAFCTELTGIVQ-DMV--DDQPHLQEVLSRFDDWMREQGLLQA-------RTVFITFGDW 174
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG-----MMGMMKNRQVP 276
DL+ +P QC I +PPY WINLK F +E TG ++ ++ ++P
Sbjct: 175 DLQKMLPSQCAYLGIPVPPYMTRWINLKRAF--------AECTGHWPKTLLDALRFCRLP 226
Query: 277 MFGSHHLGIDDTKNITRVLQRMLADG 302
G HH GIDD +N+T+++ + + G
Sbjct: 227 HLGRHHSGIDDCRNLTQLVAWLASRG 252
>gi|395334652|gb|EJF67028.1| Exonuclease [Dichomitus squalens LYAD-421 SS1]
Length = 218
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 103/213 (48%), Gaps = 33/213 (15%)
Query: 111 SQDLDFFLVLDLEG------------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
S L + LVLD E + EI+EFP L+ D FH +VRP++
Sbjct: 18 SMRLRYLLVLDFEATCDDSGHIVPRNETEIIEFPTLLYDVDEDKVHATFHEYVRPTRHPT 77
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
+ + G G V + A PF V ++++ +L + + A+ TC
Sbjct: 78 --LTPFCTELTG-IGQSTV--NAADPFPSVWERYQEFLRTREVLAQPEA-----VAYLTC 127
Query: 219 GNWDLKTKVPDQCKVS--QIKLPPY-------FMEWINLKDVFYNFYKPRKSEATGMMGM 269
G+WDLKT +P Q ++S Q + P + WINLK F + Y + + GM GM
Sbjct: 128 GDWDLKTMLPQQLRLSGTQTGMDPSTNALTAPYNRWINLKKSFQHHYGLKYPK--GMDGM 185
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+++ ++ + G HH GIDD KNI R++QRM DG
Sbjct: 186 LRHAKMELEGRHHSGIDDCKNILRIVQRMRRDG 218
>gi|392571225|gb|EIW64397.1| exonuclease RNase T and DNA polymerase III [Trametes versicolor
FP-101664 SS1]
Length = 215
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 43/215 (20%)
Query: 114 LDFFLVLDLEG------------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
L + LVLD E ++E++EFP ++ D + +FH +VRP+
Sbjct: 4 LRYLLVLDFEATCDNTNRIVPRQEMEVIEFPTILYDIEQDKVEAVFHEYVRPT------- 56
Query: 162 NKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
+ F G+ + D+A PF +V ++++ +L H G A +
Sbjct: 57 ---LHPTLTPFCTDLTGIQQATVDSAAPFPDVWERYQEFLRTH-----GVVDSPSSAIYL 108
Query: 217 TCGNWDLKTKVPDQCKVSQI---------KLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
TCG+WDLKT +P Q ++S++ L + WIN+K+ + F+ + + GM
Sbjct: 109 TCGDWDLKTMLPMQLRLSKLLESSSTPSGTLVAPYDRWINIKNSYRRFHDLKYPK--GMA 166
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
M+ + ++ + G HH GIDD KNI R++QRM DG
Sbjct: 167 SMLTHAKMELEGRHHSGIDDCKNILRLVQRMRQDG 201
>gi|403307233|ref|XP_003944109.1| PREDICTED: uncharacterized protein LOC101050958 [Saimiri
boliviensis boliviensis]
Length = 745
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 524 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTRLSDFCI 583
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 584 SLT--------GITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSW 629
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S+IK P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 630 DMSKFLNIQCQISRIKYPSFAKKWINIRKSYGNFYKVPRSQ-TKLAIMLEKLGMDYDGRP 688
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 689 HCGLDDSKNIARIAVRMLQDGCELRINEK 717
>gi|327279889|ref|XP_003224688.1| PREDICTED: 3'-5' exoribonuclease 1-like [Anolis carolinensis]
Length = 343
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 30/208 (14%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ V+D E E I+EFP+++I+ +T+ D F ++V+P ++S+ I
Sbjct: 123 DYICVIDFEATCEEGNQLEFTHEIIEFPIVLINTRTLEIEDTFQQYVKPVINPQLSDFCI 182
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+Q W+ Q L G A T G+W
Sbjct: 183 NLT--------GISQERVDKADEFPKVLQSVIDWMKQKEL------GSRYSYAILTDGSW 228
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGS 280
D+ + QC+V++++ P + +WIN++ + NFYK PR T + M++ + G
Sbjct: 229 DMSKFLNIQCRVNRLRYPAFAKKWINIRKSYGNFYKVPRNQ--TKLSTMLEKLGMDYDGR 286
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD++NI ++ RML DG +++
Sbjct: 287 PHSGLDDSRNIAQIAIRMLQDGCELRVN 314
>gi|395541883|ref|XP_003772866.1| PREDICTED: 3'-5' exoribonuclease 1 [Sarcophilus harrisii]
Length = 469
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 30/210 (14%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ V+D E E I+EFP+++++ T+ D F ++VRP +++S+ I
Sbjct: 248 DYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 307
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V++ W+ L G + + T G+W
Sbjct: 308 NLT--------GITQDMVDRADTFPQVLRNVVDWMRLKEL------GTKYKYSILTDGSW 353
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGS 280
D+ + QC++S+++ P + +WIN++ + NFYK PR T + M++ + G
Sbjct: 354 DMSKFLNIQCQISRLRYPSFAKKWINIRKSYGNFYKVPRNQ--TKLTIMLEKLGMSYDGR 411
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 412 PHSGLDDSKNIARIAVRMLRDGCELRVNEK 441
>gi|126330776|ref|XP_001373310.1| PREDICTED: 3'-5' exoribonuclease 1-like [Monodelphis domestica]
Length = 432
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 106/210 (50%), Gaps = 30/210 (14%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ V+D E E I+EFP+++++ T+ D F ++VRP +++S+ I
Sbjct: 211 DYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 270
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G+ + D A F +V++ W+ L G + + T G+W
Sbjct: 271 SLT--------GITQDMVDRAATFPQVLRNVVEWMKLKEL------GTTYKYSILTDGSW 316
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGS 280
D+ + QC++S+++ P + +WIN++ + NFYK PR T + M++ + G
Sbjct: 317 DMSKFLNIQCQISRLRYPSFAKKWINIRKSYGNFYKVPRNQ--TKLTIMLEKLGMSYDGR 374
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 375 PHSGLDDSKNIARIAVRMLRDGCELRVNEK 404
>gi|260805280|ref|XP_002597515.1| hypothetical protein BRAFLDRAFT_219821 [Branchiostoma floridae]
gi|229282780|gb|EEN53527.1| hypothetical protein BRAFLDRAFT_219821 [Branchiostoma floridae]
Length = 279
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 111 SQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
S+ DF LV+D E EI+EFP+L+++ +T+ D FH + RP+
Sbjct: 62 SEHYDFLLVIDFEATCMEENPPDFQHEIIEFPILLVNTETLIVEDQFHSYCRPT------ 115
Query: 161 INKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
IN + K G+ + D A F +V++ W+ KG G R A AT G
Sbjct: 116 INPKLTPFCTKLTGITQKMVDKAPEFPQVLEDVLDWMSS-----KGYGMGHSRFAVATDG 170
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
WD+ + QC I P F WIN+K F NFY+ R T + M+ + + G
Sbjct: 171 PWDMCRFLYQQCLYCGIPYPRPFRRWINVKKHFANFYQTRG--GTKLQEMLASLGLQFEG 228
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G DD NI R+ R++ DG +++
Sbjct: 229 KPHSGRDDAVNIARIAGRLIQDGCELRVN 257
>gi|241896984|ref|NP_001155946.1| exoribonuclease 1 [Acyrthosiphon pisum]
Length = 340
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 34/213 (15%)
Query: 116 FFLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+F+V+D+E K EI+EFP +++DAK +D F FV+PS I
Sbjct: 94 YFVVIDIEATCTENNPADYKFEIIEFPAVLVDAKKRKIIDHFQAFVKPS----------I 143
Query: 166 EGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
K +F G+ + D A F+ + +F WL +H L G + + T G
Sbjct: 144 NPKLSEFCIKLTGITQDQIDNADSFEVCLTRFTKWLEEHEL------GIKHKFSIVTDGP 197
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY---KPRKSEATGMMGMMKNRQVPM 277
+D+ + QC +S+I P + +WIN++ VF FY + + S + M+ +
Sbjct: 198 FDMARFLYGQCLMSEIPYPKFATKWINIRKVFKAFYFTKQVKYSVPCNLNAMLTFLDMEF 257
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G+ H G+DD+ NI+R+ R+L DGA + R
Sbjct: 258 EGNPHSGLDDSFNISRICIRLLEDGAFIDQNER 290
>gi|321477963|gb|EFX88921.1| hypothetical protein DAPPUDRAFT_311056 [Daphnia pulex]
Length = 349
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 103/220 (46%), Gaps = 33/220 (15%)
Query: 114 LDFFLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
DF++++D E K EI+EFP ++++ + D F + RP +N
Sbjct: 113 FDFYVIIDYEATCELLKHSNFKQEIIEFPAVLLNCQKGEVEDEFRSYCRPV------LNP 166
Query: 164 YIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G+ + D A F EV+ FE WL +K + G A T G WD
Sbjct: 167 LLTEFCTELTGITQDDVDKAPLFHEVLTSFEEWL------QKKKLGSKYSFAIVTDGPWD 220
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
+ + +QC +S+I+ P Y WIN++ F NFY K + M+ ++ G H
Sbjct: 221 IGYFLKNQCALSKIEFPTYCKYWINIRKTFANFYNTGKMPLSTMIQLIGRE---FQGRAH 277
Query: 283 LGIDDTKNITRVLQRMLADGARV-------QITARRNPDS 315
G+DD +NI ++QR++ DGARV + ARR D
Sbjct: 278 SGLDDARNIAFIVQRLVKDGARVVFNEKLAEGNARRREDG 317
>gi|156405487|ref|XP_001640763.1| predicted protein [Nematostella vectensis]
gi|156227899|gb|EDO48700.1| predicted protein [Nematostella vectensis]
Length = 277
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 31/214 (14%)
Query: 104 AAFQHKCSQDLD---FFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRF 150
A QH CS D D ++ V+D E E I+EFP ++++AKT+ F ++
Sbjct: 73 AKVQH-CSVDRDGIAYYCVIDFEATCEKENPEGYQHEIIEFPAVLVNAKTLEIEGEFQQY 131
Query: 151 VRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG-GH 209
+P + + + K+ + G + + D + F +V+ F H+W K RG G
Sbjct: 132 CKP--LLKPRLTKFCQELTG---ISQETVDKSDNFPQVLDNF-------HIWLKERGIGT 179
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+ A T G WD++ + QC++ I LP + ++INL+ + NFYK + + M
Sbjct: 180 THKFAVVTDGPWDIQRFLVTQCEICNINLPKWSRKYINLRKHYRNFYKMK----CKLSEM 235
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGA 303
++N + G H G+DD++NI R+L +ML DG
Sbjct: 236 LENLGLEFEGRPHSGLDDSRNIARILIKMLKDGG 269
>gi|118400656|ref|XP_001032650.1| exonuclease family protein [Tetrahymena thermophila]
gi|89286993|gb|EAR84987.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 215
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 37/224 (16%)
Query: 107 QHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLF-HRFVRPSKM 156
+++ + D D+ L+LD E E I+EFPV+++D K +D+F H +++PS
Sbjct: 4 KNQINNDFDYLLILDFEATCEKNVKLECQEIIEFPVVVLDVKNQQILDVFFHHYIKPS-- 61
Query: 157 SEQHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK 211
+ K F G+ + D + +E + Q +L Q+ L
Sbjct: 62 --------VNPKLTAFCTELTGIKQEQVDNGISLQEALAQLTLFLEQNKLIGSS------ 107
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPR-KSEATG----M 266
F TCG++DL + + +I++P Y +IN+K VF Y P+ K E M
Sbjct: 108 -FTFITCGDFDLGNCLRREALYKKIEIPQYLKNYINIKKVFPKQYYPKQKKEGDNRLPDM 166
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+GM++ + + G HH GIDD+KNI ++ +L G + R
Sbjct: 167 VGMLQGLNLKLDGHHHSGIDDSKNIAKIALTLLQKGFKFNKNMR 210
>gi|449266425|gb|EMC77478.1| Prion protein-interacting protein [Columba livia]
Length = 274
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 36/275 (13%)
Query: 46 SCSASSSSSSSSTHQKGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQ----- 100
S S +S S + GA+ + + Q C+++ + L+ ++ +SR L
Sbjct: 8 SVSDASGCSMIARLHTGAARFPQNLLPRARQAVCSLLPPGV-LKGYSSIVSRKLASHGFG 66
Query: 101 VDAAAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVR 152
AA Q +FLVLD E EI+EFP+L ++ +TM FH +V+
Sbjct: 67 ASMAAMSSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQ 126
Query: 153 PSKMSE-----QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG 207
P + + I+G D ++V+++ + W+ + L +
Sbjct: 127 PVVHPQLTPFCTELTGIIQGMV----------DGQPSLQQVLERVDEWMAKEGLLDPS-- 174
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
++ F TCG+WDLK +P QC+ + + YF +WINLK Y+F + G++
Sbjct: 175 ---VKSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGSWPK-NGLL 229
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
M K + G H GIDD KNI +++ + G
Sbjct: 230 DMNKGLNLQHIGRPHSGIDDCKNIANIMKTLAHRG 264
>gi|395850252|ref|XP_003797709.1| PREDICTED: 3'-5' exoribonuclease 1 [Otolemur garnettii]
Length = 349
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 232 SWDMSKFLHIQCQLSRLKYPAFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG +++ +
Sbjct: 291 RPHSGLDDSKNIARIAVRMLQDGCELRVNEK 321
>gi|351698003|gb|EHB00922.1| 3'-5' exoribonuclease 1 [Heterocephalus glaber]
Length = 348
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++V+P
Sbjct: 127 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVKPE---------- 176
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W+ L G + T G
Sbjct: 177 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDG 230
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K P + +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 231 SWDMSKFLNIQCQLSRLKYPSFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 289
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ RML DG ++I +
Sbjct: 290 RPHSGLDDSKNIARIAVRMLQDGCELRINEK 320
>gi|320168778|gb|EFW45677.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 234
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q + LVLD E EI+EFP +++D T+ V FH++VRP +S +
Sbjct: 9 QSFRYLLVLDFEAVCDEVTRPKPQEIIEFPTVVLDTTTLEIVGSFHKYVRP--VSHPILT 66
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK-----------------G 205
+ G D V F+EV + AW+ W+
Sbjct: 67 PFCTTLTG-ITQDMVSGQAT--FQEVFDEHLAWI--QSFWKSLPPAANADADAASTASSS 121
Query: 206 RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG 265
AF TCG+WDL +PDQ K P + +WIN+K F Y T
Sbjct: 122 IPSEAPTWAFVTCGDWDLNRALPDQLAALGKKSPAPYRQWINIKKEFAVKYGVSPPGMTA 181
Query: 266 MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
M+ M++ + + G HH GIDD +NI V + ML DG +IT R
Sbjct: 182 MLDMLR---LDLVGRHHSGIDDCRNIAAVAKEMLRDGHVFEITGTRG 225
>gi|158253677|gb|AAI54112.1| LOC100127672 protein [Xenopus (Silurana) tropicalis]
Length = 272
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 76 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHTYVQP--VVHPQLTP 133
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G D V D +V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 134 FCTELTGIIQ-DMV--DGQPTLSQVLERVDEWMAKEGLLDPS-----VKSIFVTCGDWDL 185
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K +P QC+ +++ YF +WINLK + + G++ M K + G H
Sbjct: 186 KLMLPGQCEYLGLQVADYFKQWINLKKAYS--FAIGTWPKNGLLDMNKGMSLQHIGRPHS 243
Query: 284 GIDDTKNITRVLQRMLADGARVQITARR 311
GIDD +NI +++ + G + T+RR
Sbjct: 244 GIDDCRNIANIMKTLAHRGFIFKQTSRR 271
>gi|350412671|ref|XP_003489724.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 6-like
[Bombus impatiens]
Length = 618
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 112 QDLDFFLVLDLE------GKI---EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q ++ LVLD E KI EI+EFP + + ++FH +++P K Q
Sbjct: 411 QPFNYLLVLDFECTCKKYEKIDPQEIIEFPCAAVSTTSWEVENVFHEYIKP-KYHPQLTP 469
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
E G+ + D F EV F WL +H ++ G +AF TCG+WD
Sbjct: 470 FCTELT----GIIQDLVDNQPYFPEVFGTFCNWLEEHKYFKDGND-----SAFVTCGDWD 520
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
LK +P QC++ I LP FM+WINLK F + T M+ +K +P+ G H
Sbjct: 521 LKFMLPSQCELENISLPKQFMKWINLKGSFCDAVDHYPRNLTDMLLHLK---LPLIGKLH 577
Query: 283 LGIDDTKNITRVLQRM 298
G+ D +N+ +++Q +
Sbjct: 578 SGMSDVENMVQIIQAL 593
>gi|330800009|ref|XP_003288032.1| hypothetical protein DICPUDRAFT_33426 [Dictyostelium purpureum]
gi|325081920|gb|EGC35419.1| hypothetical protein DICPUDRAFT_33426 [Dictyostelium purpureum]
Length = 231
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 104/217 (47%), Gaps = 33/217 (15%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q + +VLD E E I+EFP ++++ +T+ V F + +P
Sbjct: 28 QLFKYLIVLDFEATCEKDQKFPNQEIIEFPSVIVNTETLEIVSTFREYCKP--------- 78
Query: 163 KYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHL--KRAAF 215
I K F G+ + D A F V+++ WL + L G + + F
Sbjct: 79 -LIVPKLTAFCTELTGIKQETVDNADLFPNVLKRHYQWL-EESLPGVIVNGQIINDQICF 136
Query: 216 ATCGNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFY-KPRKSEATGMMGMMKNR 273
TCG+WDL+ + Q K+ + I P YF +WIN+K F +FY KP + GM M++
Sbjct: 137 VTCGDWDLRQCLQKQLKLCNNIPTPNYFKKWINIKLQFTDFYSKP----SYGMTNMLREL 192
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ + G HH G+ D+ NI R++++MLA G I ++
Sbjct: 193 NLELEGRHHCGLSDSLNIARIVKKMLAAGCIFNIISK 229
>gi|402588418|gb|EJW82351.1| exonuclease [Wuchereria bancrofti]
Length = 384
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 102 DAAAFQHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVR 152
+A + K + D+F+V+D E E I+EFP +++D VD+FH +VR
Sbjct: 122 NAEPLRSKTNIFYDYFVVIDFECTCEADLYDYNHEIIEFPAVLVD------VDVFHSYVR 175
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
P ++ ++++ G + + D ALPF +V+ F W+ H L +K R
Sbjct: 176 P--LANPQLSEFCSVFTG---ITQEMVDKALPFIDVLDSFRTWMQLHRLGQKD-----VR 225
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPY-FMEWINLKDVFYNFY-KPRKSEATGMMGMM 270
AF T G WD+ QC S++ P+ F +IN++ F N Y K + + GM+
Sbjct: 226 YAFVTDGPWDIAKFFQMQCIQSKLNAVPHDFRFYINIRRSFANKYCKKHSMQKINLGGML 285
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G H G+DD+KNI R++ +ML D + +++ +
Sbjct: 286 TFLNMKFEGREHSGLDDSKNIARIVIKMLEDRSELRVNEK 325
>gi|261327261|emb|CBH10237.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 762
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 36/205 (17%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+ LV+D E E I+EFPV+++DAK + FHR+V+P
Sbjct: 552 FDYLLVVDFEATCEEYAPPSYLHEIIEFPVVVVDAKLQRVITEFHRYVKPK--------- 602
Query: 164 YIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
++ + +F G+ + D+A P ++VI+QFE W Q G R T
Sbjct: 603 -VKPQLSEFCRQLTGIRQEDIDSAAPLEDVIKQFERWYAQ--TIPPG-----SRTVLVTD 654
Query: 219 GNWDLKTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G DL+ + Q I+ P F +WI++K VF +F++ ++ + M+ ++ Q P
Sbjct: 655 GPADLREFMYVHSVTRQGIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVL---QCPF 711
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H GIDD +NI +++ RML G
Sbjct: 712 EGRLHSGIDDARNIAKIVIRMLEVG 736
>gi|224072947|ref|XP_002303940.1| predicted protein [Populus trichocarpa]
gi|222841372|gb|EEE78919.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP +++ + T F +VRP+ QH++
Sbjct: 121 QDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQHLS 178
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D + E L++H W + +G A T NWD
Sbjct: 179 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTSFAVVTWSNWD 228
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK--SEATGMMGMMKNRQVPMFGS 280
+ + +C+ +I+ PPYF WINLK F + + EA M G+ G
Sbjct: 229 CRVMLESECRFKKIRKPPYFNRWINLKVPFCEIFGGARCLKEAVEMAGLEWQ------GR 282
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD KN R+L ++ G R IT
Sbjct: 283 AHCGLDDAKNTARLLALLMHRGIRFSIT 310
>gi|72387359|ref|XP_844104.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360612|gb|AAX81023.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800636|gb|AAZ10545.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 762
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 36/205 (17%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+ LV+D E E I+EFPV+++DAK + FHR+V+P
Sbjct: 552 FDYLLVVDFEATCEEYAPPSYLHEIIEFPVVVVDAKLQRVITEFHRYVKPK--------- 602
Query: 164 YIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
++ + +F G+ + D+A P ++VI+QFE W Q G R T
Sbjct: 603 -VKPQLSEFCRQLTGIRQEDIDSAAPLEDVIKQFERWYAQ--TIPPG-----SRTVLVTD 654
Query: 219 GNWDLKTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G DL+ + Q I+ P F +WI++K VF +F++ ++ + M+ ++ Q P
Sbjct: 655 GPADLREFMYVHSVTRQGIRFPSMFYQWIDVKQVFAHFFQCQQGKIKAMLEVL---QCPF 711
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H GIDD +NI +++ RML G
Sbjct: 712 EGRLHSGIDDARNIAKIVIRMLEVG 736
>gi|397483348|ref|XP_003812865.1| PREDICTED: ERI1 exoribonuclease 3 [Pan paniscus]
Length = 314
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 118 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 175
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 176 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 227
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 228 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 282
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 283 PHSGIDDCKNIANIMKTLAYRG 304
>gi|340052992|emb|CCC47278.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 746
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+ LV+D E E I+EFPV+++D K V FHR+VRP
Sbjct: 529 FDYLLVVDFEATCEEHPPPSYLHEIIEFPVVVVDTKLKRAVAEFHRYVRPK--------- 579
Query: 164 YIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
++ K +F G+ + D A P +EVI+QFE W Q G RA AT
Sbjct: 580 -VQPKLSEFCLRLTGIRQEDIDNAAPLEEVIRQFERWYAQ--TIPPG-----CRAVLATD 631
Query: 219 GNWDLKTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G D++ + Q I+ P F +WI++K F NF++ ++ + M+ ++ P
Sbjct: 632 GPTDMREFMYVHSVSRQGIRFPSMFYQWIDVKQAFANFFQCQQGKIKAMLEVL---HCPF 688
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H G+DD KNI ++ RML G
Sbjct: 689 EGRLHSGMDDAKNIANIVIRMLQVG 713
>gi|410032833|ref|XP_003949440.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Pan troglodytes]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 118 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 175
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 176 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 227
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 228 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 282
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 283 PHSGIDDCKNIANIMKTLAYRG 304
>gi|403291855|ref|XP_003936978.1| PREDICTED: ERI1 exoribonuclease 3 isoform 3 [Saimiri boliviensis
boliviensis]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 118 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 175
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 176 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 227
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 228 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 282
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 283 PHSGIDDCKNIANIMKTLAYRG 304
>gi|327271053|ref|XP_003220302.1| PREDICTED: ERI1 exoribonuclease 3-like [Anolis carolinensis]
Length = 229
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 20/215 (9%)
Query: 104 AAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
AA Q +FLVLD E EI+EFP+L ++ +TM FH +V+P
Sbjct: 25 AAMSSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQPVV 84
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
S+ + + G + + D ++V+++ + W+ + L + ++ F
Sbjct: 85 HSQ--LTPFCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPSV-----KSIF 134
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
TCG+WDLK +P QC+ + + YF +WINLK + + G++ M K +
Sbjct: 135 VTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKAYS--FAMGSWPKNGLLDMNKGLNL 192
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H GIDD KNI +++ + G + T++
Sbjct: 193 QHIGRPHSGIDDCKNIANIMKTLAHRGFIFKQTSK 227
>gi|146327084|gb|AAI41731.1| LOC100049744 protein [Xenopus laevis]
Length = 273
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 20/217 (9%)
Query: 103 AAAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPS 154
AA Q +FLVLD E EI+EFP+L ++ +TM FH +V+P
Sbjct: 68 VAAMTSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHTYVQP- 126
Query: 155 KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
+ + + G D V D +V+++ + W+ + L + ++
Sbjct: 127 -VVHPQLTPFCTELTGIIQ-DMV--DGQPTLSQVLERVDEWMAKEGLLDPS-----VKSI 177
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
F TCG+WDLK +P QC+ +++ YF +WINLK + + G++ M K
Sbjct: 178 FVTCGDWDLKLMLPGQCEYLGLQVADYFKQWINLKKAYS--FAIGTWPKNGLLDMNKGMS 235
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARR 311
+ G H GIDD +NI +++ + G + T+RR
Sbjct: 236 LQHIGRPHSGIDDCRNIANIMKTLAHRGFIFKQTSRR 272
>gi|441634258|ref|XP_004089825.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Nomascus leucogenys]
Length = 314
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 118 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 175
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 176 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 227
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 228 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 282
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 283 PHSGIDDCKNIANIMKTLAYRG 304
>gi|118094519|ref|XP_422418.2| PREDICTED: ERI1 exoribonuclease 3 [Gallus gallus]
Length = 265
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 35/241 (14%)
Query: 88 LEKFNHDISRDLQ-----VDAAAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVL 134
L+ ++ ISR L AA Q +FLVLD E EI+EFP+L
Sbjct: 40 LKGYSSVISRKLASHGFGASMAAMSSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPIL 99
Query: 135 MIDAKTMAFVDLFHRFVRPSKMSE-----QHINKYIEGKYGKFGVDRVWHDTALPFKEVI 189
++ +TM FH +V+P + + I+G D ++V+
Sbjct: 100 KLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQGMV----------DGQPSLQQVL 149
Query: 190 QQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLK 249
++ + W+ + L + ++ F TCG+WDLK +P QC+ + + YF +WINLK
Sbjct: 150 ERVDEWMAKEGLLDPSV-----KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLK 204
Query: 250 DVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
Y+F + G++ M K + G H GIDD KNI +++ + G + T+
Sbjct: 205 KA-YSFAMGSWPK-NGLLDMNKGLNLQHIGRPHSGIDDCKNIANIMKTLAHRGFIFKQTS 262
Query: 310 R 310
+
Sbjct: 263 K 263
>gi|407425460|gb|EKF39438.1| hypothetical protein MOQ_000337 [Trypanosoma cruzi marinkellei]
Length = 541
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 95/207 (45%), Gaps = 24/207 (11%)
Query: 111 SQDLDFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
S D ++VLD E + EI+EFP+++IDA++ + F R+VRP +
Sbjct: 65 SPSFDAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHHILTEFQRYVRPV------V 118
Query: 162 NKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
N + + G+ + DTA F V F+A L G L+ F TCG+
Sbjct: 119 NPILSDFCTELTGITQSVVDTAKTFPLV---FDAALEFLRGSGYGEAPPLRSYLFVTCGD 175
Query: 221 WDLKTKVPDQCKV-----SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
WDLKT +P Q + + I PP F W NLK + + M+ +
Sbjct: 176 WDLKTMLPSQLRTTAKTGTAIVAPPTFRRWCNLKVPMRAIAPTKAGGVFDLKEMLAAVGL 235
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADG 302
P+ G HH GIDD +NI ++Q +L G
Sbjct: 236 PLKGRHHSGIDDCRNIASIVQELLRRG 262
>gi|66811074|ref|XP_639244.1| hypothetical protein DDB_G0283113 [Dictyostelium discoideum AX4]
gi|60467872|gb|EAL65886.1| hypothetical protein DDB_G0283113 [Dictyostelium discoideum AX4]
Length = 220
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 32/213 (15%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q + +VLD E E I+EFP ++I+ +T+ V F +V+P
Sbjct: 19 QKFKYLIVLDFEATCEKDVKFPNQEIIEFPSVIINTETLETVSTFREYVKP--------- 69
Query: 163 KYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
I KF G+ + + A F +V++ W + + F
Sbjct: 70 -IINPNLSKFCTELTGIKQETVENAALFPDVLKSHCDWFFESL----PKDIQSDEYCFVC 124
Query: 218 CGNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVP 276
CG+WDL +P Q K+ + + P Y +WIN+K + FY + GM M++ +P
Sbjct: 125 CGDWDLLQCLPKQLKLCNNLSKPSYLSKWINIKKQYTLFYN---RPSFGMTNMLRELNIP 181
Query: 277 MFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
+ G HH G+ D+ NI+++L+RM+ +G + +
Sbjct: 182 LEGRHHCGLSDSLNISKILKRMIEEGCNFDLVS 214
>gi|195999854|ref|XP_002109795.1| hypothetical protein TRIADDRAFT_20827 [Trichoplax adhaerens]
gi|190587919|gb|EDV27961.1| hypothetical protein TRIADDRAFT_20827, partial [Trichoplax
adhaerens]
Length = 229
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q + +++D E EI+EFP ++++ T +FH++V+P+
Sbjct: 1 QKFSYVIIIDFEATCWKDNSSRYSSEIIEFPAVLLNVLTQQIEAVFHQYVQPT------- 53
Query: 162 NKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQH------HLWEKG--RGG 208
I K +F G+ + D +P + F WL + L+ K G
Sbjct: 54 ---INPKLSEFCKTLTGITQKQVDDGIPLATCLVSFRKWLDEIIKNKNIRLFNKNCRDAG 110
Query: 209 H--LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
H F T +WD+ + +CK QIKLP F +WI+L+ ++ FY + TG+
Sbjct: 111 HKNYYNCIFVTWSDWDIGVCLYYECKKKQIKLPTEFYQWIDLRALYKRFYGKK---PTGL 167
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G M++ + G H G+DD+KN R+ +M+ DG + +T R
Sbjct: 168 NGSMESVGLKFIGREHSGLDDSKNTARLCSKMVHDGCVLDVTKR 211
>gi|407860369|gb|EKG07376.1| hypothetical protein TCSYLVIO_001498 [Trypanosoma cruzi]
Length = 550
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 24/203 (11%)
Query: 115 DFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
D ++VLD E + EI+EFP+++IDA++ + F R+VRP +N +
Sbjct: 68 DAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPV------VNPIL 121
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D A F V F+A L G L+ F TCG+WDLK
Sbjct: 122 SDFCTELTGIKQSVVDAAETFPLV---FDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLK 178
Query: 225 TKVPDQCKVSQ-----IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
T +P Q + ++ I PP F W NLK + M M+ +P+ G
Sbjct: 179 TMLPSQLRTTEKTGTAIVAPPTFRRWCNLKVPMRAIVPTKARGMFDMREMLAAVGLPLKG 238
Query: 280 SHHLGIDDTKNITRVLQRMLADG 302
HH GIDD +NI V+Q +L G
Sbjct: 239 RHHSGIDDCRNIASVVQELLRRG 261
>gi|73977201|ref|XP_862517.1| PREDICTED: ERI1 exoribonuclease 3 isoform 4 [Canis lupus
familiaris]
gi|301781887|ref|XP_002926358.1| PREDICTED: ERI1 exoribonuclease 3-like isoform 1 [Ailuropoda
melanoleuca]
Length = 259
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 63 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 120
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 121 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 172
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 173 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 227
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 228 PHSGIDDCKNIANIMKTLAYQGFIFKQTSK 257
>gi|116666689|pdb|1ZBH|A Chain A, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666690|pdb|1ZBH|B Chain B, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666691|pdb|1ZBH|C Chain C, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
gi|116666692|pdb|1ZBH|D Chain D, 3'-End Specific Recognition Of Histone Mrna Stem-Loop By
3'- Exonuclease
Length = 299
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 104/211 (49%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 78 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 127
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ + L G + + T G
Sbjct: 128 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDLMKLKEL------GTKYKYSLLTDG 181
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ + G
Sbjct: 182 SWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDG 240
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G+DD+KNI R+ RML DG ++I +
Sbjct: 241 RPNCGLDDSKNIARIAVRMLQDGCELRINEK 271
>gi|426215380|ref|XP_004001950.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Ovis aries]
Length = 259
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 63 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 120
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 121 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 172
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 173 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 227
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 228 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 257
>gi|297278522|ref|XP_002801563.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Macaca mulatta]
gi|390465850|ref|XP_003733476.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Callithrix jacchus]
gi|390465852|ref|XP_003733477.1| PREDICTED: ERI1 exoribonuclease 3 isoform 3 [Callithrix jacchus]
gi|403291851|ref|XP_003936976.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403291853|ref|XP_003936977.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403291857|ref|XP_003936979.1| PREDICTED: ERI1 exoribonuclease 3 isoform 4 [Saimiri boliviensis
boliviensis]
gi|426329369|ref|XP_004025713.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Gorilla gorilla
gorilla]
gi|119627449|gb|EAX07044.1| prion protein interacting protein, isoform CRA_c [Homo sapiens]
gi|194387402|dbj|BAG60065.1| unnamed protein product [Homo sapiens]
Length = 259
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 63 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 120
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 121 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 172
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 173 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 227
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 228 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 257
>gi|427778455|gb|JAA54679.1| Putative exonuclease [Rhipicephalus pulchellus]
Length = 283
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 48/226 (21%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+FL+LD E EI+EFPVL ++ +T FH +V+P + +
Sbjct: 67 QAYDYFLMLDFEATCSAEKGVPTPQEIIEFPVLKVNGRTFETESTFHTYVQPQ--AHPQL 124
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHL------------WEKGRG-- 207
+ G D V D +EV+ +F+ W+ + L W+ +
Sbjct: 125 TAFCTELTGIVQ-DMV--DDQPHLQEVLSRFDDWMREQGLLQARTVFITFGDWDLQKMLP 181
Query: 208 ------GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKS 261
G R F T G+WDL+ +P QC I +PPY WINLK F +
Sbjct: 182 SQCAYLGXXARTVFITFGDWDLQKMLPSQCAYLGIPVPPYMTRWINLKRAF--------A 233
Query: 262 EATG-----MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
E TG ++ ++ ++P G HH GIDD +N+T+++ + + G
Sbjct: 234 ECTGHWPKTLLDALRFCRLPHLGRHHSGIDDCRNLTQLVAWLASRG 279
>gi|348553710|ref|XP_003462669.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cavia porcellus]
Length = 343
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 103/207 (49%), Gaps = 24/207 (11%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP IN
Sbjct: 122 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRP------EINTQ 175
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + G+ + D A F +V+++ W+ L G + T G+WD+
Sbjct: 176 LSDFCIRLTGITQDQVDRADTFPQVLKKVIDWMKLKEL------GTKYKYCILTDGSWDM 229
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ QC++ ++K P + +WIN++ + NFYK +S+ T + M++ + G H
Sbjct: 230 SKFLNIQCQLCRLKYPSFAKKWINVRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHS 288
Query: 284 GIDDTKNITRVLQRMLADGARVQITAR 310
G+DD+KNI ++ RML DG ++I +
Sbjct: 289 GLDDSKNIAKIAVRMLQDGCELRINEK 315
>gi|444302267|pdb|4HXH|B Chain B, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
gi|444302270|pdb|4HXH|E Chain E, Structure Of Mrna Stem-loop, Human Stem-loop Binding
Protein And 3'hexo Ternary Complex
Length = 303
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 74 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 123
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ W L G + + T G
Sbjct: 124 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDWXKLKEL------GTKYKYSLLTDG 177
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD + QC++S++K PP+ +WIN++ + NFYK +S+ T + ++ G
Sbjct: 178 SWDXSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIXLEKLGXDYDG 236
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ R L DG ++I +
Sbjct: 237 RPHCGLDDSKNIARIAVRXLQDGCELRINEK 267
>gi|392340620|ref|XP_003754131.1| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Rattus norvegicus]
gi|392348244|ref|XP_003750052.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Rattus norvegicus]
Length = 296
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 100 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 157
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 158 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 209
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 210 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 264
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 265 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 294
>gi|109730985|gb|AAI17541.1| Eri3 protein [Mus musculus]
Length = 296
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 100 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 157
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 158 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 209
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 210 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 264
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 265 PHSGIDDCKNIANIMKTLAYRG 286
>gi|187469812|gb|AAI67080.1| Unknown (protein for IMAGE:8363520) [Rattus norvegicus]
Length = 292
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 96 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 153
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 154 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 205
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 206 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 260
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 261 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 290
>gi|164420717|ref|NP_001106713.1| ERI1 exoribonuclease 3 isoform 1 [Bos taurus]
gi|166989902|sp|A6QLH5.1|ERI3_BOVIN RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|151556386|gb|AAI47968.1| ERI3 protein [Bos taurus]
gi|296488926|tpg|DAA31039.1| TPA: ERI1 exoribonuclease 3 isoform 1 [Bos taurus]
gi|440907277|gb|ELR57437.1| ERI1 exoribonuclease 3 [Bos grunniens mutus]
Length = 337
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 104 AAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
AA Q +FLVLD E EI+EFP+L ++ +TM FH +V+P
Sbjct: 133 AAMMSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP-- 190
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ + + G + + D ++V+++ + W+ + L + ++ F
Sbjct: 191 VVHPQLTPFCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIF 242
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKN 272
TCG+WDLK +P QC+ + + YF +WINLK Y+F P+ G++ M K
Sbjct: 243 VTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKG 297
Query: 273 RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G H GIDD KNI +++ + G + T++
Sbjct: 298 LSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSK 335
>gi|395857747|ref|XP_003801246.1| PREDICTED: ERI1 exoribonuclease 3 [Otolemur garnettii]
Length = 337
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPIADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|119920012|ref|XP_001253741.1| PREDICTED: 3'-5' exoribonuclease 1 [Bos taurus]
gi|297492734|ref|XP_002699843.1| PREDICTED: 3'-5' exoribonuclease 1 [Bos taurus]
gi|296471031|tpg|DAA13146.1| TPA: three prime histone mRNA exonuclease 1-like [Bos taurus]
Length = 370
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 107/209 (51%), Gaps = 28/209 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EF V++++ T+ D F ++VRP +++S+ I
Sbjct: 128 DYICIIDFEATCEEGNPPEFIHEIIEFSVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 187
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 188 NLT--------GITQDQVDKADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSW 233
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D+ + QC++S++K PP+ +WI+++ + NFYK +S+ + M++ + G
Sbjct: 234 DMSKFLNIQCQLSRLKYPPFAKKWISIQKSYGNFYKVPRSQ-IKLTIMLEKLGMDYDGWP 292
Query: 282 HLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KN+ R+ RML DG +++ +
Sbjct: 293 HSGLDDSKNVARIAVRMLQDGCELRVNEK 321
>gi|449458085|ref|XP_004146778.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
gi|449511572|ref|XP_004163993.1| PREDICTED: 3'-5' exoribonuclease 1-like [Cucumis sativus]
Length = 414
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T F +VRP+ QH++
Sbjct: 135 QEFQYFVVIDFEATCDKDRNPHPQEIIEFPSVIVNSVTGHLEACFQTYVRPT--CNQHLS 192
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ G + ++ D + E L++H W + RG A T NWD
Sbjct: 193 DFCRDLTG---IQQIQVDRGVTLNEA-------LLRHDKWLEKRGIKNTNFAVVTWSNWD 242
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ +I+ PPYF WINLK F + + EA M G+ G
Sbjct: 243 CRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGARCNLKEAVEMAGLDWE------G 296
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD KN R+L ++ G R IT
Sbjct: 297 RAHCGLDDAKNTARLLALIMHKGFRFSIT 325
>gi|55670498|pdb|1W0H|A Chain A, Crystallographic Structure Of The Nuclease Domain Of
3'hexo, A Deddh Family Member, Bound To Ramp
Length = 204
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 28/216 (12%)
Query: 108 HKCSQDLDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---S 154
H D+ ++D E E I+EFPV++++ T+ D F ++VRP +
Sbjct: 3 HXADSYYDYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINT 62
Query: 155 KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
++S+ I+ G+ + D A F +V+++ W L G + +
Sbjct: 63 QLSDFCISLT--------GITQDQVDRADTFPQVLKKVIDWXKLKEL------GTKYKYS 108
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
T G+WD + QC++S++K PP+ +WIN++ + NFYK +S+ T + ++
Sbjct: 109 LLTDGSWDXSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIXLEKLG 167
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H G+DD+KNI R+ R L DG ++I +
Sbjct: 168 XDYDGRPHCGLDDSKNIARIAVRXLQDGCELRINEK 203
>gi|242057047|ref|XP_002457669.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
gi|241929644|gb|EES02789.1| hypothetical protein SORBIDRAFT_03g011390 [Sorghum bicolor]
Length = 424
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T + F +VRP+ Q +
Sbjct: 135 QEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPT--YHQFLT 192
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G A T NWD
Sbjct: 193 DFCKELTG---IQQIQVDRGVPLGEA-------LLMHDKWLEDKGIKNTNFAIVTWSNWD 242
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+T + +C+ +I+ PPYF WINLK F Y + EA + G+ G
Sbjct: 243 CRTMLESECRFKRIRKPPYFNRWINLKVPFQEVYGDVRCNLKEAVQLAGLTWE------G 296
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L M+ G + IT
Sbjct: 297 RAHCGLDDARNTARLLALMMHRGFKFSIT 325
>gi|387015834|gb|AFJ50036.1| ERI1 exoribonuclease 3-like [Crotalus adamanteus]
Length = 257
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 104 AAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
AA Q +FLVLD E EI+EFP+L ++ +TM FH +V+P
Sbjct: 53 AAMSSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP-- 110
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ + + G + + D ++V+++ + W+ + L + ++ F
Sbjct: 111 VVHPQLTPFCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPT-----VKSIF 162
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
TCG+WDLK +P QC+ + + YF +WINLK Y+F + G++ M K +
Sbjct: 163 VTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGSWPK-NGLLDMNKGLNL 220
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H GIDD KNI +++ + G + T++
Sbjct: 221 QHIGRPHSGIDDCKNIANIMKTLAHRGFIFKQTSK 255
>gi|118489625|gb|ABK96614.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 409
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP +++ + T F +VRP+ Q ++
Sbjct: 131 QDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 188
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D + E L++H W + +G + A T NWD
Sbjct: 189 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTKFAVVTWSNWD 238
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK--SEATGMMGMMKNRQVPMFGS 280
+ + +C+ +I+ PPYF WINLK F+ + + EA M G+ G
Sbjct: 239 CRVMLESECRFKKIRKPPYFNRWINLKVPFHEIFGGARCLKEAVEMAGLHWQ------GR 292
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD KN R+L ++ G R IT
Sbjct: 293 AHCGLDDAKNTARLLALLMHRGIRFSIT 320
>gi|345780904|ref|XP_850849.2| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Canis lupus
familiaris]
gi|410967106|ref|XP_003990063.1| PREDICTED: ERI1 exoribonuclease 3 [Felis catus]
Length = 337
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 306 PHSGIDDCKNIANIMKTLAYQGFIFKQTSK 335
>gi|291399043|ref|XP_002715197.1| PREDICTED: prion protein interacting protein [Oryctolagus
cuniculus]
Length = 337
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|297278520|ref|XP_001093178.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Macaca mulatta]
Length = 335
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 139 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 196
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 197 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 248
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 249 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 303
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 304 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 333
>gi|344287723|ref|XP_003415602.1| PREDICTED: ERI1 exoribonuclease 3 [Loxodonta africana]
Length = 337
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 335
>gi|431910041|gb|ELK13128.1| Prion protein-interacting protein [Pteropus alecto]
Length = 337
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|149693719|ref|XP_001497227.1| PREDICTED: ERI1 exoribonuclease 3 [Equus caballus]
Length = 337
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|74136559|ref|NP_076971.1| ERI1 exoribonuclease 3 [Homo sapiens]
gi|332259224|ref|XP_003278687.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Nomascus leucogenys]
gi|332808745|ref|XP_513102.3| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Pan troglodytes]
gi|426329367|ref|XP_004025712.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Gorilla gorilla
gorilla]
gi|172045564|sp|O43414.2|ERI3_HUMAN RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|158254566|dbj|BAF83256.1| unnamed protein product [Homo sapiens]
gi|162319286|gb|AAI56813.1| Exoribonuclease 3 [synthetic construct]
gi|261860912|dbj|BAI46978.1| exoribonuclease 3 [synthetic construct]
gi|380816434|gb|AFE80091.1| ERI1 exoribonuclease 3 [Macaca mulatta]
gi|384949372|gb|AFI38291.1| ERI1 exoribonuclease 3 [Macaca mulatta]
gi|410207994|gb|JAA01216.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410250276|gb|JAA13105.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410290452|gb|JAA23826.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333785|gb|JAA35839.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333787|gb|JAA35840.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
gi|410333789|gb|JAA35841.1| ERI1 exoribonuclease family member 3 [Pan troglodytes]
Length = 337
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|390465848|ref|XP_002750780.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Callithrix jacchus]
Length = 337
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 335
>gi|351696855|gb|EHA99773.1| Prion protein-interacting protein [Heterocephalus glaber]
Length = 337
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|354470182|ref|XP_003497438.1| PREDICTED: ERI1 exoribonuclease 3-like [Cricetulus griseus]
Length = 296
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 100 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 157
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 158 FCTELTG---IIQAMVDGQPRLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 209
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 210 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 264
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 265 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 294
>gi|348552232|ref|XP_003461932.1| PREDICTED: ERI1 exoribonuclease 3-like [Cavia porcellus]
Length = 337
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|224057242|ref|XP_002299190.1| predicted protein [Populus trichocarpa]
gi|222846448|gb|EEE83995.1| predicted protein [Populus trichocarpa]
Length = 409
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 29/208 (13%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP +++ + T F +VRP+ Q ++
Sbjct: 131 QDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQLLS 188
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D + E L++H W + +G + A T NWD
Sbjct: 189 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLENKGIKNTKFAVVTWSNWD 238
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK--SEATGMMGMMKNRQVPMFGS 280
+ + +C+ +I+ PPYF WINLK F + + + EA M G+ G
Sbjct: 239 CRVMLESECRFKKIRKPPYFNRWINLKVPFCDIFGGARCLKEAVEMAGLHWQ------GR 292
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD KN R+L ++ G R IT
Sbjct: 293 AHCGLDDAKNTARLLALLMRRGIRFSIT 320
>gi|321471838|gb|EFX82810.1| hypothetical protein DAPPUDRAFT_195366 [Daphnia pulex]
Length = 228
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 101/213 (47%), Gaps = 35/213 (16%)
Query: 112 QDLDFFLVLDLE-------GKI---EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q + LVLD E G I EI+EFPVL ++ V FHR+V+P +
Sbjct: 32 QRFERLLVLDFEATCDSQRGTIRPQEIIEFPVLNVETNGFETVGTFHRYVKPQ--VHPTL 89
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ G D V + A P KEV++ F WL+ HL K A TCG+W
Sbjct: 90 TPFCTSLTGIIQ-DMV--EDAAPLKEVMEDFHKWLLSQHLLNK-------EFAVVTCGDW 139
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMG-----MMKNRQVP 276
DLK +P Q + +P YF WIN+K +F +E+TG+ M+ + ++
Sbjct: 140 DLKELLPRQFLHTGQVVPAYFKSWINIKMIF--------AESTGVYPRNLPHMLSHAKLV 191
Query: 277 MFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
FG H GIDD NI V++ + ++ ++T+
Sbjct: 192 HFGRLHSGIDDCHNIAAVVRFLGRRSSQWRLTS 224
>gi|28174986|gb|AAH21405.2| Eri3 protein [Mus musculus]
Length = 264
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 68 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 125
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 126 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 177
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 178 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 232
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 233 PHSGIDDCKNIANIMKTLAYRG 254
>gi|2852640|gb|AAC19158.1| unknown [Homo sapiens]
Length = 397
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 20/199 (10%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 201 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 258
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 259 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 310
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K +P QC+ + + YF +WINLK Y+F G++ M K + G H
Sbjct: 311 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAM-GCWPKNGLLDMNKGLSLQHIGRPHS 368
Query: 284 GIDDTKNITRVLQRMLADG 302
GIDD KNI +++ + G
Sbjct: 369 GIDDCKNIANIMKTLAYRG 387
>gi|405958600|gb|EKC24712.1| 3'-5' exoribonuclease 1 [Crassostrea gigas]
Length = 405
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 96/198 (48%), Gaps = 25/198 (12%)
Query: 115 DFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN-KY 164
D+ +++D E EI+EFP +++D T VD FH F +P IN +
Sbjct: 150 DYLIIIDFEATCQENNLNYNHEIIEFPAVLVDCHTREIVDEFHEFCKPI------INPRL 203
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
E G G+ + D A F V+++ E+W+ H+L G A T G WD+
Sbjct: 204 TEFCCGLTGITQDVVDKADEFPAVLERMESWMSSHYL------GVDHTFAVVTDGPWDMS 257
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+ QC S+I P + +WIN++ + ++Y ++ + M+ N + G+ H G
Sbjct: 258 RFLQMQCNFSKIHFPHWGKKWINIRKAYSSYYSCKR---MNLEEMLINLGLKFQGTQHCG 314
Query: 285 IDDTKNITRVLQRMLADG 302
+ D++NI R+ ++L DG
Sbjct: 315 LHDSRNIARIAIQLLNDG 332
>gi|148698603|gb|EDL30550.1| prion protein interacting protein 1, isoform CRA_a [Mus musculus]
Length = 259
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 63 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 120
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 121 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 172
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 173 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 227
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 228 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 257
>gi|432094495|gb|ELK26058.1| ERI1 exoribonuclease 3, partial [Myotis davidii]
Length = 333
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 36/215 (16%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P
Sbjct: 137 QRYHYFLVLDFEATCDKPQIQPQEIIEFPILKLNGRTMEIESTFHMYVQP---------- 186
Query: 164 YIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
I + F G+ + D ++V+++ + W+ + L + ++ F TC
Sbjct: 187 VIHPQLTPFCTELTGIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTC 241
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQV 275
G+WDLK +P QC+ + + YF +WINLK Y+F P+ G++ M K +
Sbjct: 242 GDWDLKIMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSL 296
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H GIDD KNI +++ + G + T++
Sbjct: 297 QHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSK 331
>gi|255578253|ref|XP_002529994.1| conserved hypothetical protein [Ricinus communis]
gi|223530517|gb|EEF32399.1| conserved hypothetical protein [Ricinus communis]
Length = 409
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP +++ + T F +VRP+ QH++
Sbjct: 131 QDFQYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQHLS 188
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D + E L++H W + +G A T NWD
Sbjct: 189 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLEKKGIKNTSFAVVTWSNWD 238
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ +I+ PPYF WINLK F + + EA M G+ G
Sbjct: 239 CRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVRCNLKEAVEMAGLAWQ------G 292
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD KN R+L ++ G + IT
Sbjct: 293 RAHCGLDDAKNTARLLAFLMRKGIKFSIT 321
>gi|307776322|pdb|2XRI|A Chain A, Crystal Structure Of Human Eri1 Exoribonuclease 3
Length = 224
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 28/226 (12%)
Query: 98 DLQVDAAAFQHKC--SQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLF 147
DL + FQ Q +FLVLD E EI+EFP+L ++ +TM F
Sbjct: 12 DLGTENLYFQSMSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTF 71
Query: 148 HRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG 207
H +V+P + + + G + + D ++V+++ + W+ + L +
Sbjct: 72 HMYVQP--VVHPQLTPFCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV- 125
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEAT 264
++ F TCG+WDLK +P QC+ + + YF +WINLK Y+F P+
Sbjct: 126 ----KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----N 176
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G++ M K + G H GIDD KNI +++ + G + T++
Sbjct: 177 GLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFIFKQTSK 222
>gi|344294294|ref|XP_003418853.1| PREDICTED: ERI1 exoribonuclease 2 [Loxodonta africana]
Length = 684
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP +++ T FH FV+P
Sbjct: 29 KIKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAALLNTSTGEIESEFHAFVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------G 207
Q E G+ +V D +P K + QF W+ H + ++ +
Sbjct: 84 QEHPLLSEFCMELTGIKQVQVDEGVPLKICLSQFCKWI--HKIQQQKKIFFATEVLDPSS 141
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
+K AF T +WDL + +CK Q+ P + WI+L+ + FYK RK + G+
Sbjct: 142 SKVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYK-RKPK--GLS 198
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
G ++ + G H G+DD++N + +M+ DG ++IT N P RN L
Sbjct: 199 GALQEVGIEFSGREHSGLDDSRNTAHLAWKMIRDGCLMKITRSLNKVPTKRNPNIL 254
>gi|33859765|ref|NP_536717.2| ERI1 exoribonuclease 3 [Mus musculus]
gi|81913994|sp|Q8C460.1|ERI3_MOUSE RecName: Full=ERI1 exoribonuclease 3; AltName: Full=Prion
interactor 1; AltName: Full=Prion protein-interacting
protein
gi|26350187|dbj|BAC38733.1| unnamed protein product [Mus musculus]
gi|74184336|dbj|BAE25703.1| unnamed protein product [Mus musculus]
gi|109733321|gb|AAI16686.1| Exoribonuclease 3 [Mus musculus]
Length = 337
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRG 327
>gi|293347578|ref|XP_001071982.2| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Rattus norvegicus]
gi|392348242|ref|XP_233435.5| PREDICTED: ERI1 exoribonuclease 3 isoform 2 [Rattus norvegicus]
gi|149035532|gb|EDL90213.1| similar to prion protein interacting protein 1, isoform CRA_a
[Rattus norvegicus]
Length = 337
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 251 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 305
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 306 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 335
>gi|119627448|gb|EAX07043.1| prion protein interacting protein, isoform CRA_b [Homo sapiens]
Length = 206
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 10 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 67
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 68 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 119
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 120 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 174
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 175 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 204
>gi|148227894|ref|NP_001089039.1| ERI1 exoribonuclease 2 [Xenopus laevis]
gi|82179168|sp|Q5HZL1.1|ERI2_XENLA RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|57032602|gb|AAH88972.1| Exod1 protein [Xenopus laevis]
Length = 687
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 32/246 (13%)
Query: 96 SRDLQVDAAAFQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDL 146
S+ Q + + K Q ++ +++D E EI+EFP ++++
Sbjct: 17 SKTSQTSSNVSRPKARQFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVSNGEIESE 76
Query: 147 FHRFVRPSKMSEQHINKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK 204
FH +V+P ++H I + G+++ D +P K + QF +W IQ EK
Sbjct: 77 FHTYVQP----QEH---PILSDFCTELTGINQQQVDDGVPLKICLSQFNSW-IQKLQKEK 128
Query: 205 G----------RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYN 254
G K AF T +WDL + +C+ Q+K P WI+L+ +
Sbjct: 129 GIAFVTAVPTHSTAEHKMCAFVTWSDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKL 188
Query: 255 FYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPD 314
FY R G+ G +++ + G H G+DD++N ++ RM+ DG ++IT +
Sbjct: 189 FYNRRPK---GLNGALQDLGIEFSGREHSGLDDSRNTAKLASRMICDGCVMKITKSLDKV 245
Query: 315 SRNVQY 320
+ + Y
Sbjct: 246 NHKISY 251
>gi|395730614|ref|XP_003780607.1| PREDICTED: LOW QUALITY PROTEIN: ERI1 exoribonuclease 3 [Pongo
abelii]
Length = 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 24/202 (11%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM H +V+P + +
Sbjct: 118 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTXHMYVQP--VVHPQLTP 175
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G V D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 176 FCTELTGIIQA-MVEMDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 229
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 230 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 284
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H GIDD KNI +++ + G
Sbjct: 285 PHSGIDDCKNIANIMKTLAYRG 306
>gi|358333145|dbj|GAA37315.2| 3'-5' exoribonuclease 1 [Clonorchis sinensis]
Length = 643
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 27/210 (12%)
Query: 116 FFLVLDLEGKI--------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
+ L++DLE EI+EFP+L+ + +T + +FH + +P +
Sbjct: 362 YLLIIDLEATCDFQEHRQSAPEYPHEIIEFPILLYNTRTRKCIGVFHAYCKPKLRPDLTA 421
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + VD A PF V+ + E WL H R A CG
Sbjct: 422 FCTSLTQISQHEVD-----NAHPFPHVLARIEDWLFNRHGLSNVRC-----AVVCDCGA- 470
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGS 280
D+ + QC++ I LP + WINL F FYK P ++ T + M+++ + G
Sbjct: 471 DMGKFMRIQCRLDGIPLPSWATVWINLSKAFRVFYKLPLRNRVT-LSTMLRDLNLSFIGQ 529
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD NI R+++ +LADG +++ R
Sbjct: 530 QHRGLDDAINILRIVRTLLADGCLLRVNER 559
>gi|363739793|ref|XP_424602.3| PREDICTED: ERI1 exoribonuclease 2 [Gallus gallus]
Length = 671
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 113 DLDFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ DF LVLD E + EI+EFP ++++A T FH FV+P EQ +
Sbjct: 20 EFDFLLVLDFESTCWRDARQRRPEIIEFPAVLLNAATGRIEAEFHTFVQPQ---EQPV-- 74
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK-------GRGG--HLKRAA 214
E GV + D +P + QF WL + +K R K
Sbjct: 75 LSEFCTTLTGVTQKQVDEGVPLHICLSQFLKWLQEIQKEKKILFSSDIPRNAIPEAKLCT 134
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMMGMMKN 272
F T +WDL + +CK Q+ P F WI+LK + FY KP+ G+ G ++
Sbjct: 135 FVTWTDWDLGVCLHYECKRKQLWKPDIFNSWIDLKATYRAFYNRKPK-----GLSGALQY 189
Query: 273 RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ G H G+DD++N R+ R++ DG ++IT
Sbjct: 190 VGLAFVGREHSGLDDSRNTARLAWRLICDGCVLKIT 225
>gi|389601394|ref|XP_001565349.2| putative phosphotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505025|emb|CAM42259.2| putative phosphotransferase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 575
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 21/218 (9%)
Query: 112 QDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q D ++VLDLE E++EFP++++D +T V F R+VRP K ++
Sbjct: 47 QPFDAYIVLDLEATCEAGRRITDAEVIEFPMVLVDPRTATQVAEFQRYVRPVK--NPMLS 104
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
++ G + V H PF V + +L + L G L+ TCG+WD
Sbjct: 105 RFCTELTG-ITQNMVSHRD--PFPVVYCEALQFLAEAGL---GDAPPLRSYCVVTCGDWD 158
Query: 223 LKTKVPDQCKVS-QIKLPPYFMEWINLKDVFYNFYKPRKSEATG---MMGMMKNRQVPMF 278
LKT +P Q ++S Q P F W NLK E G M M++ +P
Sbjct: 159 LKTMLPSQIRISGQQGTPLSFQRWCNLKKYMSGLGLRDGGERGGPTDMPDMLRILGLPHQ 218
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSR 316
G HH GIDD +NI VL +L G V T P R
Sbjct: 219 GRHHSGIDDCRNIAAVLCALLKRGLVVDTTFATEPFER 256
>gi|146087811|ref|XP_001465911.1| putative phosphotransferase [Leishmania infantum JPCM5]
gi|134070012|emb|CAM68342.1| putative phosphotransferase [Leishmania infantum JPCM5]
Length = 570
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 112 QDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q D ++VLD E E++EFP++++DA+T V F R+VRP K N
Sbjct: 53 QPFDAYVVLDFEATCEADRRIADAEVIEFPMILVDARTATPVAEFQRYVRPVK------N 106
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ + PF V + +L + L G ++ TCG+W
Sbjct: 107 PVLSRFCTELTGITQDMVSGRDPFPVVYCEALQFLAEAGL---GDAPPMRSYCVVTCGDW 163
Query: 222 DLKTKVPDQCKVS-QIKLPPYFMEWINLKDVFYNFYKPRKS---------EATGMMGMMK 271
DLKT +P Q +VS Q P F W NLK S +GM M++
Sbjct: 164 DLKTMLPAQMRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGCGGAAPPLRPSGMPDMLQ 223
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+P+ G HH GIDD +N+T VL +L G + +T P
Sbjct: 224 MLGLPLQGRHHSGIDDCRNLTAVLCALLRRGLVIDVTFSTAP 265
>gi|398015969|ref|XP_003861173.1| phosphotransferase, putative [Leishmania donovani]
gi|322499398|emb|CBZ34471.1| phosphotransferase, putative [Leishmania donovani]
Length = 570
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 112 QDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q D ++VLD E E++EFP++++DA+T V F R+VRP K N
Sbjct: 53 QPFDAYVVLDFEATCEEDRRIADAEVIEFPMILVDARTATPVAEFQRYVRPVK------N 106
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ + PF V + +L + L G ++ TCG+W
Sbjct: 107 PVLSRFCTELTGITQDMVSGRDPFPVVYCEALQFLAEAGL---GDAPPMRSYCVVTCGDW 163
Query: 222 DLKTKVPDQCKVS-QIKLPPYFMEWINLKDVFYNFYKPRKS---------EATGMMGMMK 271
DLKT +P Q +VS Q P F W NLK S +GM M++
Sbjct: 164 DLKTMLPAQMRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGCGGAAPPLRPSGMPDMLQ 223
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+P+ G HH GIDD +N+T VL +L G + +T P
Sbjct: 224 MLGLPLQGRHHSGIDDCRNLTAVLCALLRRGLVIDVTFSTAP 265
>gi|71651495|ref|XP_814425.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70879394|gb|EAN92574.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 284
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 115 DFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
D ++VLD E + EI+EFP+++IDA++ + F R+VRP +N +
Sbjct: 57 DAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPV------VNPIL 110
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D A F V F+A L G L+ F TCG+WDLK
Sbjct: 111 SDFCTELTGIKQSVVDAAETFPLV---FDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLK 167
Query: 225 TKVPDQCKVSQ-----IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
T +P Q + ++ I P F W NLK + + M+ +P+ G
Sbjct: 168 TMLPSQLRTTEKTGTAIVAPSTFRRWCNLKVPMRTIVPTKARGIFDLREMLAAVGLPLKG 227
Query: 280 SHHLGIDDTKNITRVLQRMLADG 302
HH GIDD +NI V+Q +L G
Sbjct: 228 RHHSGIDDCRNIASVVQELLRRG 250
>gi|71662500|ref|XP_818256.1| phosphotransferase [Trypanosoma cruzi strain CL Brener]
gi|70883496|gb|EAN96405.1| phosphotransferase, putative [Trypanosoma cruzi]
Length = 539
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 24/203 (11%)
Query: 115 DFFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
D ++VLD E + EI+EFP+++IDA++ + F R+VRP +N +
Sbjct: 57 DAYVVLDFEATCERNRRLEEPEIIEFPMVLIDARSHRILTEFQRYVRPV------VNPIL 110
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D A F V F+A L G L+ F TCG+WDLK
Sbjct: 111 SDFCTELTGIKQSVVDAAETFPLV---FDAALEFLRGSGYGEAPPLRSYLFVTCGDWDLK 167
Query: 225 TKVPDQCKVSQ-----IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
T +P Q + ++ I P F W NLK + + M+ +P+ G
Sbjct: 168 TMLPSQLRTTEKTGTAIVAPSTFRRWCNLKVPMRTIVPTKARGIFDLREMLAAVGLPLKG 227
Query: 280 SHHLGIDDTKNITRVLQRMLADG 302
HH GIDD +NI V+Q +L G
Sbjct: 228 RHHSGIDDCRNIASVVQELLRRG 250
>gi|360043282|emb|CCD78695.1| putative 3-5 exonuclease eri1 [Schistosoma mansoni]
Length = 562
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 115 DFFLVLDLEG------KI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
D+ L++DLE KI EI+EFP+L+ + V +FH + +P
Sbjct: 292 DYLLIIDLEATCESKEKITTDADYPHEIIEFPILLYSTRLRKCVSVFHAYCKPR------ 345
Query: 161 INKYIEGKYGKFGVD-----RVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ +F D ++ D A PF V+ Q E WL + H KR A
Sbjct: 346 ----LHPDLSEFCTDLTQIQQIQVDNAQPFPYVLLQIEEWLFKRHKLAN------KRCAI 395
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
+ D+ + QC++S I +P + WINL F FYK + M+ + +
Sbjct: 396 VCDCSADMSKFMRIQCRLSNISMPSWVNIWINLTKSFRAFYKFPSRYRITLNVMLHDLGL 455
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H G+DD NI R+++ +L+DG +++ R
Sbjct: 456 SFVGQRHRGLDDAINILRIVRVLLSDGCSLRVNER 490
>gi|301604764|ref|XP_002932007.1| PREDICTED: ERI1 exoribonuclease 2 [Xenopus (Silurana) tropicalis]
Length = 693
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
K Q ++ +++D E EI+EFP ++++ FH +V+P Q
Sbjct: 30 KARQFFEYLIIIDFESTCWKDGKHSTQEIIEFPAVLLNVANGEIESEFHTYVQP-----Q 84
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG----------RGGH 209
E G+ ++ D +P K + QF +W IQ EKG
Sbjct: 85 EHPILSEFCTELTGIKQLQVDNGVPLKICLSQFNSW-IQKLQKEKGIAFVTAVPTHSAAE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
K AF T +WDL + +C+ Q+K P WI+L+ + FY R G+ G
Sbjct: 144 HKMCAFVTWSDWDLGVCLLYECRRKQMKKPDILNSWIDLRATYKLFYNRR---PKGLNGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNVQY 320
+++ + G H G+DD++N ++ RM+ DG ++IT + + + Y
Sbjct: 201 LQDLGIEFSGREHSGLDDSRNTAKLAWRMIRDGCVMKITKSLDKVNHKISY 251
>gi|326929461|ref|XP_003210882.1| PREDICTED: ERI1 exoribonuclease 2-like [Meleagris gallopavo]
Length = 716
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 21/193 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++A T FH FV+P EQ + E GV + D +P
Sbjct: 85 EIIEFPAVLLNAATGRIEAEFHAFVQPQ---EQPV--LSEFCTALTGVTQKQVDEGVPLH 139
Query: 187 EVIQQFEAWL--IQHH-----LWEKGRGG--HLKRAAFATCGNWDLKTKVPDQCKVSQIK 237
+ QF WL IQ + E K AF T +WDL + +CK Q++
Sbjct: 140 ICLSQFLKWLQKIQKEKKFLFISETPSNAIPETKLCAFVTWTDWDLGVCLHYECKRKQLR 199
Query: 238 LPPYFMEWINLKDVFYNFY--KPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVL 295
P F WI+LK + FY KP+ G+ G +++ + G H G+DD++N R+
Sbjct: 200 KPDIFNSWIDLKATYRAFYNRKPK-----GLSGALQDLGLAFVGREHSGLDDSRNTARLA 254
Query: 296 QRMLADGARVQIT 308
R++ DG ++IT
Sbjct: 255 WRLICDGCVLKIT 267
>gi|256076258|ref|XP_002574430.1| 3'-5' exonuclease [Schistosoma mansoni]
Length = 576
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 95/215 (44%), Gaps = 35/215 (16%)
Query: 115 DFFLVLDLEG------KI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
D+ L++DLE KI EI+EFP+L+ + V +FH + +P
Sbjct: 292 DYLLIIDLEATCESKEKITTDADYPHEIIEFPILLYSTRLRKCVSVFHAYCKPR------ 345
Query: 161 INKYIEGKYGKFGVD-----RVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ +F D ++ D A PF V+ Q E WL + H KR A
Sbjct: 346 ----LHPDLSEFCTDLTQIQQIQVDNAQPFPYVLLQIEEWLFKRHKLAN------KRCAI 395
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
+ D+ + QC++S I +P + WINL F FYK + M+ + +
Sbjct: 396 VCDCSADMSKFMRIQCRLSNISMPSWVNIWINLTKSFRAFYKFPSRYRITLNVMLHDLGL 455
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H G+DD NI R+++ +L+DG +++ R
Sbjct: 456 SFVGQRHRGLDDAINILRIVRVLLSDGCSLRVNER 490
>gi|218187984|gb|EEC70411.1| hypothetical protein OsI_01406 [Oryza sativa Indica Group]
Length = 544
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T F +VRP+ Q +
Sbjct: 256 QEFQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPAY--NQLLT 313
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G K A T NWD
Sbjct: 314 DFCKELTG---IQQIQVDRGVPLSEA-------LLMHDKWLEEKGIKHKNFAVVTWSNWD 363
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C++ +I+ PPYF WINLK F + + EA + G+ G
Sbjct: 364 CRVMLESECRLKRIRKPPYFNRWINLKVPFQEVFGGVRCNLKEAVQLSGLTWE------G 417
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 418 RAHCGLDDARNTARLLALLMHRGFKFSIT 446
>gi|344238514|gb|EGV94617.1| Prion protein-interacting protein [Cricetulus griseus]
Length = 206
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 26/210 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 10 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 67
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 68 FCTELTG---IIQAMVDGQPRLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 119
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 120 KVMLPGQCHYLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGR 174
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQITAR 310
H GIDD KNI +++ + G + T++
Sbjct: 175 PHSGIDDCKNIANIMKTLAYRGFIFKQTSK 204
>gi|402224358|gb|EJU04421.1| exonuclease RNase T and DNA polymerase III [Dacryopinax sp. DJM-731
SS1]
Length = 212
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 99/211 (46%), Gaps = 30/211 (14%)
Query: 114 LDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
L +FL+LD E E++EFP ++ + +FH +V+P + H+
Sbjct: 12 LKYFLILDFEATCASPRPVNFVQEVIEFPCIVYSMEQEYPTAMFHEYVKP--LLSPHLTD 69
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D+ F V ++F WL + + + F TCGNWDL
Sbjct: 70 FCTRLTG---ISQATVDSGDKFSNVWRRFNEWLAR-----LCQDTDPRSFIFVTCGNWDL 121
Query: 224 KTKVPDQCKVSQIKLPPY--------FMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQV 275
+T +P Q + I+ P F ++N+KD F FY +G++ M+ +
Sbjct: 122 QTMLPAQLRQCGIEFPRRETGHTGVDFTRYVNIKDAFAEFYD--SDPPSGLLEMLHVLGM 179
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
+ G H GIDD +N++R++++M DG +++
Sbjct: 180 QLEGRFHSGIDDCRNVSRIIEQMRRDGWKIE 210
>gi|239793055|dbj|BAH72791.1| ACYPI010006 [Acyrthosiphon pisum]
Length = 340
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 100/213 (46%), Gaps = 34/213 (15%)
Query: 116 FFLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+F+V+D+E K EI+EFP +++DAK +D F FV+PS I
Sbjct: 94 YFVVIDIEATCTENNPADYKFEIIEFPAVLVDAKKRKIIDHFQAFVKPS----------I 143
Query: 166 EGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
K +F G+ + D A F+ + +F WL +H L G + + T G
Sbjct: 144 NPKLSEFCIKLTGITQDQIDNADSFEVCLTRFTKWLEEHEL------GIKHKFSIVTDGP 197
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY---KPRKSEATGMMGMMKNRQVPM 277
+ QC +S+I P + +WIN++ VF FY + + S + M+ +
Sbjct: 198 LIWLRFLYGQCLMSEIPYPKFATKWINIRKVFKAFYFTKQVKYSVPCNLNAMLTFLDMEF 257
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G+ H G+DD+ NI+R+ R+L DGA + R
Sbjct: 258 EGNPHSGLDDSFNISRICIRLLEDGAFIDQNER 290
>gi|403418454|emb|CCM05154.1| predicted protein [Fibroporia radiculosa]
Length = 398
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 99/220 (45%), Gaps = 54/220 (24%)
Query: 114 LDFFLVLDLE--------GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
L + L+LD E G+ EI+EFP L+ + FH +VRP
Sbjct: 196 LRYLLILDFEATCGDAVNGQNEIIEFPTLVYSLERDRVEATFHEYVRP------------ 243
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQ-----HHLWEKGRG------GHLKRAA 214
V H T PF + ++ +W++ +G G A
Sbjct: 244 -----------VVHPTLTPFCTELTGITQDVVGCADTFPTVWKRFQGFMDDTEGLSDPGA 292
Query: 215 FA--TCGNWDLKTKVPDQCKVSQIK--------LPPYFMEWINLKDVFYNFYKPRKSEAT 264
F TCGNWDL++ +P Q +S+ + L F +IN+K F Y+ R+ +
Sbjct: 293 FIFLTCGNWDLQSMLPRQLILSKCESALDESDNLTAPFNRFINIKHSFRKLYRLRRQQ-- 350
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGAR 304
GM M+K+ ++ + G HH GIDD KNI R++QRM ADG R
Sbjct: 351 GMQAMLKDLKLTLEGRHHSGIDDCKNILRIVQRMRADGWR 390
>gi|195629706|gb|ACG36494.1| histone mRNA exonuclease 1 [Zea mays]
Length = 437
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T + F +VRP+ Q +
Sbjct: 133 QEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPT--YHQFLT 190
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G A T NWD
Sbjct: 191 DFCKELTG---IQQIQVDRGVPLGEA-------LLMHDKWLEDKGIKNTNFAIVTWSNWD 240
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ +I+ PPYF WINL+ F Y + EA + G+ G
Sbjct: 241 CRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWE------G 294
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 295 RAHCGLDDARNTARLLALLMHRGFKFSIT 323
>gi|116666695|pdb|1ZBU|A Chain A, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666696|pdb|1ZBU|B Chain B, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666697|pdb|1ZBU|C Chain C, Crystal Structure Of Full-Length 3'-Exonuclease
gi|116666698|pdb|1ZBU|D Chain D, Crystal Structure Of Full-Length 3'-Exonuclease
Length = 349
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 32/211 (15%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ ++D E E I+EFPV++++ T+ D F ++VRP
Sbjct: 128 DYICIIDFEATCEEGNPPEFVHEIIEFPVVLLNTHTLEIEDTFQQYVRPE---------- 177
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I + F G+ + D A F +V+++ L G + + T G
Sbjct: 178 INTQLSDFCISLTGITQDQVDRADTFPQVLKKVIDLXKLKEL------GTKYKYSLLTDG 231
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WD + QC++S++K PP+ +WIN++ + NFYK +S+ T + ++ G
Sbjct: 232 SWDXSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIXLEKLGXDYDG 290
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQITAR 310
H G+DD+KNI R+ R L DG ++I +
Sbjct: 291 RPHCGLDDSKNIARIAVRXLQDGCELRINEK 321
>gi|414877072|tpg|DAA54203.1| TPA: histone mRNA exonuclease 1 [Zea mays]
Length = 436
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T + F +VRP+ Q +
Sbjct: 133 QEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPT--YHQFLT 190
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G A T NWD
Sbjct: 191 DFCKELTG---IQQIQVDRGVPLGEA-------LLMHDKWLEDKGIKNTNFAIVTWSNWD 240
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ +I+ PPYF WINL+ F Y + EA + G+ G
Sbjct: 241 CRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWE------G 294
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 295 RAHCGLDDARNTARLLALLMHRGFKFSIT 323
>gi|443705651|gb|ELU02084.1| hypothetical protein CAPTEDRAFT_224647 [Capitella teleta]
Length = 394
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
+ KC Q + +VLD E EI+EFP ++++ F ++V P +
Sbjct: 27 IRKKCKQPFAYLIVLDFESTCWQDTKFKPQEIIEFPAVLLNTSNGEIEAHFQKYVVP--L 84
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQ-----HHLWEKGRGGHLK 211
++ + + G + + D +P ++ F WL + + ++ K
Sbjct: 85 EYPILSAFCQQLTG---ITQAQVDDGIPINHCLRSFTTWLQKIKQERNLVFNSVTDATSK 141
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
F T +WDL + ++C+ Q++ P WI+L+ + FY + G+ G +K
Sbjct: 142 GCTFVTWSDWDLGVCLRNECRRKQLRCPAELNSWIDLRAAYKTFYG---RQPNGLNGSLK 198
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ + G H G+DD KN ++ RM+ DG + IT
Sbjct: 199 DLGMDYDGREHCGLDDAKNTAKLAWRMMCDGCILNIT 235
>gi|328768674|gb|EGF78720.1| hypothetical protein BATDEDRAFT_32150, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 265
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 20/195 (10%)
Query: 116 FFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+LV D+E E++EFPV+ ID TM V F R+ RP ++ +
Sbjct: 80 IYLVCDIEATCDSDSGFDFASEVIEFPVIAIDGTTMETVSTFRRYCRP------ILHPTL 133
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+F G+ + D A PF V F W++ + G F T G WDL+
Sbjct: 134 TDFCKQFTGITQEQTDAADPFTVVFADFLEWMLSLYPSTDGVSALTDEVIFVTDGPWDLR 193
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+ + S I+ P + + IN++ ++ Y K T + GM+K + G H G
Sbjct: 194 DFLEKEFIYSNIQRPDFMRKIINIRSLYTELYGKEK---TNLDGMLKGLGMVFEGREHCG 250
Query: 285 IDDTKNITRVLQRML 299
DD N+ R+L+RM+
Sbjct: 251 FDDASNVARILRRMV 265
>gi|226492270|ref|NP_001146741.1| uncharacterized protein LOC100280343 [Zea mays]
gi|219888569|gb|ACL54659.1| unknown [Zea mays]
Length = 427
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T + F +VRP+ Q +
Sbjct: 124 QEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPT--YHQFLT 181
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G A T NWD
Sbjct: 182 DFCKELTG---IQQIQVDRGVPLGEA-------LLMHDKWLEDKGIKNTNFAIVTWSNWD 231
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ +I+ PPYF WINL+ F Y + EA + G+ G
Sbjct: 232 CRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWE------G 285
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 286 RAHCGLDDARNTARLLALLMHRGFKFSIT 314
>gi|357131416|ref|XP_003567334.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 425
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T F +VRP+ Q++
Sbjct: 134 QEFQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPA--YHQNLT 191
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G K A T NWD
Sbjct: 192 DFCKELTG---IQQIQVDRGVPLSEA-------LLMHDKWLEDKGIKHKNFAVVTWSNWD 241
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ I+ PPYF WINLK F Y + +A + G+ G
Sbjct: 242 CRVMLESECRFKSIRKPPYFNRWINLKVPFQEMYGGVRCNLKDAVQLAGLTWE------G 295
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 296 RAHCGLDDARNTARLLALLMHRGFKFSIT 324
>gi|414877071|tpg|DAA54202.1| TPA: hypothetical protein ZEAMMB73_728544 [Zea mays]
Length = 433
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 94/209 (44%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T + F +VRP+ Q +
Sbjct: 130 QEFQYFVVIDFEATCDKVNNPFPQEIIEFPSVLVNSATGKLEECFQTYVRPT--YHQFLT 187
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G A T NWD
Sbjct: 188 DFCKELTG---IQQIQVDRGVPLGEA-------LLMHDKWLEDKGIKNTNFAIVTWSNWD 237
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C+ +I+ PPYF WINL+ F Y + EA + G+ G
Sbjct: 238 CRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGDVRCNLKEAVQLAGLTWE------G 291
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 292 RAHCGLDDARNTARLLALLMHRGFKFSIT 320
>gi|66472468|ref|NP_001018476.1| ERI1 exoribonuclease 2 [Danio rerio]
gi|82228769|sp|Q502M8.1|ERI2_DANRE RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|63100865|gb|AAH95637.1| Zgc:111991 [Danio rerio]
Length = 555
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 110 CSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
C Q F +++D E EI+EFP +++ + A FH +V+P E+
Sbjct: 28 CKQRFSFLIIIDFESTCWREKSSSGQEIIEFPAVLLSVCSGAVESEFHSYVQPQ---ERP 84
Query: 161 INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK----------GRGGHL 210
+ + D+V D+A P V+ +F WL L E+ G
Sbjct: 85 VLSAFCTELTGITQDQV--DSAPPLHVVLSRFSRWL--RSLQEERGVVFLTDSSGAAPSA 140
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMMG 268
+ AF T +WDL + +CK Q+ +P WI+L+ + FY KP+ G+ G
Sbjct: 141 QLCAFVTWSDWDLGVCLLYECKRKQLSVPEALKNWIDLRATYKLFYNRKPK-----GLRG 195
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
+ + + G H G+ D +N + QRM+ DG ++ IT+
Sbjct: 196 ALLDLGIEFTGREHSGLVDARNTALLAQRMMTDGCQLSITS 236
>gi|115435988|ref|NP_001042752.1| Os01g0280000 [Oryza sativa Japonica Group]
gi|56783678|dbj|BAD81090.1| putative 3' exoribonuclease [Oryza sativa Japonica Group]
gi|56784201|dbj|BAD81586.1| putative 3' exoribonuclease [Oryza sativa Japonica Group]
gi|113532283|dbj|BAF04666.1| Os01g0280000 [Oryza sativa Japonica Group]
gi|215737104|dbj|BAG96033.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618206|gb|EEE54338.1| hypothetical protein OsJ_01314 [Oryza sativa Japonica Group]
Length = 411
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 30/209 (14%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T F +VRP+ Q +
Sbjct: 123 QEFQYFVVIDFEATCDKENNPHPQEIIEFPSVLVNSATGQLEASFQTYVRPA--YNQLLT 180
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D +P E L+ H W + +G K A T NWD
Sbjct: 181 DFCKELTG---IQQIQVDRGVPLSEA-------LLMHDKWLEEKGIKHKNFAVVTWSNWD 230
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFG 279
+ + +C++ +I+ PPYF WINLK F + + EA + G+ G
Sbjct: 231 CRVMLESECRLKRIRKPPYFNRWINLKVPFQEVFGGVRCNLKEAVQLSGLTWE------G 284
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD +N R+L ++ G + IT
Sbjct: 285 RAHCGLDDARNTARLLALLMHRGFKFSIT 313
>gi|389751881|gb|EIM92954.1| exonuclease RNase T and DNA polymerase III [Stereum hirsutum
FP-91666 SS1]
Length = 220
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 125 KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWH 179
++EI+EFP ++ + T FH +VRP I + F G+ +
Sbjct: 33 EMEIIEFPTILYNLNTKRVQATFHEYVRP----------VIYPQLTDFCLDLTGISQETV 82
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
D A F V ++ A+L +WE AF TCG+WDLKT +P Q +S
Sbjct: 83 DAADRFPAVWTRYLAFLKAQGVWENSSA-----LAFVTCGDWDLKTMLPQQLGLSFADDA 137
Query: 240 P--------YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNI 291
F WIN+K F++ Y ++ +G++ M+K + G HH GIDD +N+
Sbjct: 138 TKKHETEHVLFKRWINIKRSFHSVYGGKR-RPSGLISMLKALAITHQGRHHSGIDDCQNL 196
Query: 292 TRVLQRMLADG 302
+++RM DG
Sbjct: 197 LSIVERMREDG 207
>gi|332023240|gb|EGI63496.1| Prion protein-interacting protein [Acromyrmex echinatior]
Length = 218
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 34/199 (17%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q ++ LV+D E E I+E P ++ D+FH +V+P ++
Sbjct: 10 QKYEYLLVMDFEATCERYTVLKPQEIIELPCAVVSTCDWKLKDMFHTYVKP------RVH 63
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ + D F V F WL + ++K ++++F TCGNW
Sbjct: 64 PTLTPFCTELTGIMQETVDDQPYFANVFSNFCEWLTKGGYFDKP-----EKSSFVTCGNW 118
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG-----MMGMMKNRQVP 276
DLKT +P QC + I LP F +W+ LK +F E+TG + M+ VP
Sbjct: 119 DLKTMLPSQCALDGITLPDQFKQWVELKYIF--------CESTGYYPKSLKDMLVRLNVP 170
Query: 277 MFGSHHLGIDDTKNITRVL 295
+ G H GIDD KN+ ++
Sbjct: 171 LKGRLHSGIDDVKNMVSII 189
>gi|241686335|ref|XP_002411687.1| exonuclease, putative [Ixodes scapularis]
gi|215504479|gb|EEC13973.1| exonuclease, putative [Ixodes scapularis]
Length = 337
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 93/205 (45%), Gaps = 32/205 (15%)
Query: 96 SRDLQVDAAAFQHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVD 145
SR L A+ Q D+FLVLD E EI+EFPVL ++ ++
Sbjct: 85 SRVLSARPASNMTVREQPFDYFLVLDFEATCSREKPPPHPQEIIEFPVLKVNGRSFQVES 144
Query: 146 LFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG 205
FH++V+P E ++ + G D V D F+EV+++F W+ L
Sbjct: 145 TFHQYVQPRVHRE--LSSFCTELTGIIQ-DMV--DEQPFFEEVLEKFHQWMCSEGL---- 195
Query: 206 RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG 265
G KR AF T G+WDL+ +P QC +I +P Y WINLK F EATG
Sbjct: 196 LGPPEKRVAFVTFGDWDLQKMLPSQCSYFKIPVPEYLTSWINLKKAFV--------EATG 247
Query: 266 -----MMGMMKNRQVPMFGSHHLGI 285
+ ++ ++ G HH GI
Sbjct: 248 HWPKTLPETLEYCRLEQVGRHHSGI 272
>gi|387913954|gb|AFK10586.1| prion protein interacting protein [Callorhinchus milii]
Length = 276
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 20/194 (10%)
Query: 117 FLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGK 168
FLVLD E EI+EFPV+ + +T+ +FH +V+P + + +
Sbjct: 85 FLVLDFEAACDKELIKPQEIIEFPVVRLHGRTLEIQSVFHTYVQPE--AHPQLTPFCTEL 142
Query: 169 YGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVP 228
G + + D + +Q + W+ L + + F TCG+WDL+ +P
Sbjct: 143 TG---IVQSMVDGQPTLQRALQMVDEWMKNEGLLDPN-----VNSIFVTCGDWDLRKMLP 194
Query: 229 DQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDT 288
QC+ ++ +P YF +WINLK + + +G+ M++ + G H GIDD
Sbjct: 195 GQCQYLKLPVPDYFKKWINLKKAYGTAME--TYPKSGLPCMVEGLALSHIGRLHSGIDDC 252
Query: 289 KNITRVLQRMLADG 302
KNI +++ + G
Sbjct: 253 KNIANIMKELARKG 266
>gi|167522769|ref|XP_001745722.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776071|gb|EDQ89693.1| predicted protein [Monosiga brevicollis MX1]
Length = 320
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 25/229 (10%)
Query: 102 DAAAFQHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVR 152
D AA Q + V+D E E I+E P +++DAK+ +D F +VR
Sbjct: 86 DHAASDSSARQPFELVCVMDFEATCEEERSPFPHEIIEIPAILLDAKSGELLDTFQTYVR 145
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK- 211
P K++ Q ++K+ G D+V D A F E Q FE +L + +K + H
Sbjct: 146 P-KLNPQ-LSKFCTNLTG-ITQDQV--DAAKLFPEAWQDFEDFLGK--AVQKFKASHDVD 198
Query: 212 --RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK------PRKSEA 263
R A+ G WD + + QC++SQ+ P +W++++ +K R + A
Sbjct: 199 DVRVLCASDGPWDFRDFLAFQCQLSQMDYPAVCQQWMDVRKRLTKHFKLKWAGPERAAYA 258
Query: 264 TGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
TG+ M++ + G H GIDD++NI R++Q ++ +GA++ +T N
Sbjct: 259 TGLDFMLQAVGLTFEGRPHSGIDDSRNIARLVQVLIDEGAQLSVTHDYN 307
>gi|403277084|ref|XP_003930207.1| PREDICTED: ERI1 exoribonuclease 2 [Saimiri boliviensis boliviensis]
Length = 690
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T FH +V+P E
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFHAYVQPQ---E 85
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------G 207
Q I E G+ + D +P K + QF W+ H + ++ +
Sbjct: 86 QPI--LSEFCMELTGIKQAQVDEGVPLKICLSQFCKWI--HKIQQQKKIIFAAGVSEPST 141
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
+ AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 142 SEVNLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRSTYKLFYR-RKPK--GLS 198
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
G ++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 199 GALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNSSIL 254
>gi|71417703|ref|XP_810632.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875193|gb|EAN88781.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 793
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ LVLD E E I+EFPV+M+D + V FH FV+P
Sbjct: 563 DYLLVLDFEATCEESTPPSYLHEIIEFPVVMVDVRLQRAVAEFHHFVKPK---------- 612
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ K +F G+ + D ALP ++VI++FE W H G R AT G
Sbjct: 613 VNPKLSEFCRQLTGIRQEDIDNALPLEDVIRRFERW----HAQTVPPG---SRTMLATDG 665
Query: 220 NWDLKTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
DLK + Q I+ P F +WI++K F +F++ ++ + M+ + P
Sbjct: 666 PTDLKEFMYIHSVSRQGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALN---CPFE 722
Query: 279 GSHHLGIDDTKNITRVLQRMLADG 302
G H GIDD +N+ ++ RML G
Sbjct: 723 GRLHSGIDDARNVATIVIRMLKLG 746
>gi|407832352|gb|EKF98422.1| hypothetical protein TCSYLVIO_010685 [Trypanosoma cruzi]
Length = 793
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ LVLD E E I+EFPV+M+D + V FH FV+P
Sbjct: 563 DYLLVLDFEATCEESTPPSYLHEIIEFPVVMVDVRLQRAVAEFHHFVKPK---------- 612
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ K +F G+ + D ALP ++VI++FE W H G R AT G
Sbjct: 613 VNPKLSEFCRQLTGIRQEDIDNALPLEDVIRRFERW----HAQTVPPG---SRTMLATDG 665
Query: 220 NWDLKTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
DLK + Q I+ P F +WI++K F +F++ ++ + M+ + P
Sbjct: 666 PTDLKEFMYIHSVSRQGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALN---CPFE 722
Query: 279 GSHHLGIDDTKNITRVLQRMLADG 302
G H GIDD +N+ ++ RML G
Sbjct: 723 GRLHSGIDDARNVATIVIRMLKLG 746
>gi|407410780|gb|EKF33093.1| hypothetical protein MOQ_003040 [Trypanosoma cruzi marinkellei]
Length = 795
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 94/204 (46%), Gaps = 36/204 (17%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ LVLD E E I+EFPV+M+D + V FH FV+P
Sbjct: 565 DYLLVLDFEATCEESTPPSYLHEIIEFPVVMVDVRLQRAVAEFHHFVKPK---------- 614
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ K +F G+ + D ALP ++VI++FE W Q G R AT G
Sbjct: 615 VNPKLSEFCRQLTGIRQEDIDNALPLEDVIRRFERWHAQ--TIPPG-----SRTMLATDG 667
Query: 220 NWDLKTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
DLK + Q I+ P F +WI++K F +F++ ++ + M+ + P
Sbjct: 668 PTDLKEFMYIHSVSRQGIRFPSMFYQWIDVKRFFAHFFQCQQGKIKAMLDALN---CPFE 724
Query: 279 GSHHLGIDDTKNITRVLQRMLADG 302
G H GIDD +N+ ++ RML G
Sbjct: 725 GRLHSGIDDARNVATIVIRMLKLG 748
>gi|126334116|ref|XP_001366655.1| PREDICTED: ERI1 exoribonuclease 2 [Monodelphis domestica]
Length = 696
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 102/219 (46%), Gaps = 33/219 (15%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH- 160
Q D+ +++D E EI+EFP ++++ T F +V+P E+H
Sbjct: 33 QLFDYLIIIDFESTCWNDGKHHYSQEIIEFPAVLLNTLTGEIESEFQTYVQP----EEHP 88
Query: 161 -INKY-IEGKYGKFGVDRVWHDTALPFKEVIQQFEAW--LIQHH-------LWEKGRGGH 209
++K+ IE G+ + D +P K + QF W LIQ
Sbjct: 89 ILSKFCIE----LTGIKQAQVDEGVPLKICLSQFCKWIHLIQQQKKITFAPSITNNSASE 144
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +C+ Q++ P + WI+L+ + FY+ RK + G+ G
Sbjct: 145 VKSCAFVTWSDWDLGVCLEYECRRKQLRKPIFLNSWIDLRATYKLFYR-RKPK--GLSGA 201
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
++ + G H G+DD++N + RM+ DG ++IT
Sbjct: 202 LQELGIEFSGREHSGLDDSRNTAHLAWRMIRDGCIMKIT 240
>gi|342180403|emb|CCC89880.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 760
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 98/200 (49%), Gaps = 26/200 (13%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+ LV+D E E I+EFPV+++D K + FHR+VRP S+ ++
Sbjct: 549 FDYILVVDFEATCEENAPPSYLHEIIEFPVVVVDVKLQRVITEFHRYVRPKFKSQ--LSD 606
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G+ + D+A ++VI+QFE W Q G R AT G D+
Sbjct: 607 FCRALT---GIQQDDIDSASLLEDVIKQFERWYAQ--TIPPG-----SRVVLATDGPADM 656
Query: 224 KTKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
+ + Q I+ P F +WI++K +F +F++ ++ + M+ ++ P G H
Sbjct: 657 REFMYVHSVTRQGIRFPNLFYQWIDVKQIFAHFFQCQQGKIKAMLEVL---HCPFEGRLH 713
Query: 283 LGIDDTKNITRVLQRMLADG 302
GIDD +NI +++ RML G
Sbjct: 714 SGIDDARNIAKIVIRMLEVG 733
>gi|355686536|gb|AER98088.1| exoribonuclease 3 [Mustela putorius furo]
Length = 176
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 93/187 (49%), Gaps = 18/187 (9%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP+L ++ +TM FH +V+P + + + G + + D +
Sbjct: 4 EIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTPFCTELTG---IIQAMVDGQPSLQ 58
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+V+++ + W+ + L + ++ F TCG+WDLK +P QC+ + + YF +WI
Sbjct: 59 QVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQWI 113
Query: 247 NLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGA 303
NLK Y+F P+ G++ M K + G H GIDD KNI +++ + G
Sbjct: 114 NLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYQGF 168
Query: 304 RVQITAR 310
+ T++
Sbjct: 169 IFKQTSK 175
>gi|281337568|gb|EFB13152.1| hypothetical protein PANDA_015995 [Ailuropoda melanoleuca]
Length = 365
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 44/225 (19%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEA-------------------- 263
K +P QC+ + + YF +WINLK V ++ +
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKVLKRGVPSGRTASLEEQAGKGESKSHCKKSSFA 310
Query: 264 ------TGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
G++ M K + G H GIDD KNI +++ + G
Sbjct: 311 MGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYQG 355
>gi|300798138|ref|NP_001178043.1| ERI1 exoribonuclease 2 [Rattus norvegicus]
Length = 687
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+ +V+D E EI+EFP ++++ T FH +V+P Q
Sbjct: 32 QLYDYLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQP-----QEH 86
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------GGHL 210
E G+ +V D +P K + QF W+ H L ++ + +
Sbjct: 87 PILSEFCTELTGIKQVQVDEGVPLKICLSQFCKWI--HKLQQQKKISFATGDSEPSTPEV 144
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMMG 268
K AF T +WDL + +CK Q+ P + WI+L+ + FY KP+ G+ G
Sbjct: 145 KPCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYNRKPK-----GLSG 199
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 200 ALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLN 243
>gi|354499797|ref|XP_003511992.1| PREDICTED: ERI1 exoribonuclease 2 [Cricetulus griseus]
Length = 687
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 30/221 (13%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+ +V+D E EI+EFP +++ T FH +V+P Q
Sbjct: 32 QVYDYLIVIDFESTCWKDGKHHNSPEIIEFPAVLLSTATGEIESEFHAYVQP-----QEH 86
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR----------GGHLK 211
E G+ +V D +P K + QF W+ H + ++ + +K
Sbjct: 87 PVLSEFCTELTGIKQVQVDEGVPLKICLSQFCKWI--HKIQQQKKIILATGDLEPSTEVK 144
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
AF T +WDL + +C+ Q+ P + WI+L+ + FYK RK + G+ G ++
Sbjct: 145 LCAFVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYKLFYK-RKPK--GLSGALQ 201
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+ G H G+DD++N + +M+ DG ++IT N
Sbjct: 202 EVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLN 242
>gi|348584174|ref|XP_003477847.1| PREDICTED: ERI1 exoribonuclease 2-like [Cavia porcellus]
Length = 690
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 103/228 (45%), Gaps = 37/228 (16%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T FH +V+P +
Sbjct: 29 KSKQLYDYIIVIDFESTCWNDGKHHNSQEIIEFPAVLLNTSTGEIESEFHTYVQPQEHPV 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR--------- 206
+SE I G+ + D +P K + QF W+ H + ++ +
Sbjct: 89 LSEFCIELT--------GIKQAQVDEGVPLKICLSQFCKWI--HKIQQQKKIFFTTGISE 138
Query: 207 --GGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEAT 264
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK +
Sbjct: 139 PSTCEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK-- 195
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G+ G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 196 GLSGALQEVGIEFSGREHSGLDDSRNTALLAWKMIKDGCLMKITKSLN 243
>gi|296087843|emb|CBI35099.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 32/210 (15%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP +++ + T F +VRP+ Q ++
Sbjct: 241 QDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQILS 298
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D + E L++H W + +G A T NWD
Sbjct: 299 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLEKKGIKNTNFAVVTWSNWD 348
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLK----DVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
+ + +C+ +I+ PPYF WINLK +VF + K EA M G+
Sbjct: 349 CRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVWCNLK-EAVEMAGLAWQ------ 401
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G H G+DD KN R+L ++ G + IT
Sbjct: 402 GRAHCGLDDAKNTARLLAFLMHRGFKFSIT 431
>gi|355745231|gb|EHH49856.1| hypothetical protein EGM_00583 [Macaca fascicularis]
Length = 365
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 44/225 (19%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKD----------VFYNFYKPRKSEAT--------- 264
K +P QC+ + + YF +WINLK Y + ++ E T
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKGSSPGAASGASCYQSKEAQRKENTPGVKAYSFA 310
Query: 265 -------GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
G++ M K + G H GIDD KNI +++ + G
Sbjct: 311 MGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 355
>gi|281339701|gb|EFB15285.1| hypothetical protein PANDA_017444 [Ailuropoda melanoleuca]
Length = 672
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 33/236 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T FH +V+P
Sbjct: 22 KSKQFFDYLIVIDFESTCWNDGKRHQSQEIIEFPAVLLNTSTGEIESEFHAYVQP----- 76
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P + + QF W+ IQ ++ G
Sbjct: 77 QEHPILSEFCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQEKKIIFATGIPDLPNAE 136
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMM 267
+K AF T +WDL + +CK Q+ P + WI+L+ + FY KP+ G+
Sbjct: 137 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYGRKPK-----GLS 191
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
G ++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 192 GALQEVGIEFLGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNSSVL 247
>gi|301784463|ref|XP_002927641.1| PREDICTED: ERI1 exoribonuclease 2-like [Ailuropoda melanoleuca]
Length = 679
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 103/236 (43%), Gaps = 33/236 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T FH +V+P
Sbjct: 29 KSKQFFDYLIVIDFESTCWNDGKRHQSQEIIEFPAVLLNTSTGEIESEFHAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P + + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQEKKIIFATGIPDLPNAE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMM 267
+K AF T +WDL + +CK Q+ P + WI+L+ + FY KP+ G+
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYGRKPK-----GLS 198
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
G ++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 199 GALQEVGIEFLGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNSSVL 254
>gi|359487133|ref|XP_003633521.1| PREDICTED: uncharacterized protein LOC100853630 [Vitis vinifera]
Length = 415
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 32/210 (15%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP +++ + T F +VRP+ Q ++
Sbjct: 136 QDFQYFVVIDFEATCDKGKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQILS 193
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + G + ++ D + E L++H W + +G A T NWD
Sbjct: 194 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLEKKGIKNTNFAVVTWSNWD 243
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLK----DVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
+ + +C+ +I+ PPYF WINLK +VF + K EA M G+
Sbjct: 244 CRVMLESECRFKKIRKPPYFNRWINLKVPFREVFGGVWCNLK-EAVEMAGLAWQ------ 296
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G H G+DD KN R+L ++ G + IT
Sbjct: 297 GRAHCGLDDAKNTARLLAFLMHRGFKFSIT 326
>gi|357515343|ref|XP_003627960.1| ERI1 exoribonuclease [Medicago truncatula]
gi|355521982|gb|AET02436.1| ERI1 exoribonuclease [Medicago truncatula]
gi|388515457|gb|AFK45790.1| unknown [Medicago truncatula]
Length = 415
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ F+V+D E EI+EFP +++ + T F +VRP+ QH++
Sbjct: 135 QEFQNFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSVTGQLEACFQTYVRPT--CNQHLS 192
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA--TCGN 220
+ + G + ++ D + E L++H W + +G +K A FA T N
Sbjct: 193 DFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLEKKG--IKNANFAVVTWSN 240
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPM 277
WD + + +C+ +I+ PPYF WINL+ F + + EA + G+
Sbjct: 241 WDCRVMLESECRFKKIRKPPYFNRWINLRVPFSEVFGAVRCNLKEAVEIAGLAWQ----- 295
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G H G+DD KN R+L ++ G + IT
Sbjct: 296 -GRAHCGLDDAKNTARLLALLMHRGFKFSIT 325
>gi|345305381|ref|XP_001508438.2| PREDICTED: ERI1 exoribonuclease 2 [Ornithorhynchus anatinus]
Length = 757
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 103/230 (44%), Gaps = 37/230 (16%)
Query: 107 QHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK- 155
+ K Q D+ +V+D E EI+EFP ++++ T F +V+P +
Sbjct: 28 RSKSKQLFDYLIVIDFESTCWNDGKHHYSQEIIEFPAVLLNTSTGEIESEFQCYVQPQEH 87
Query: 156 --MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG--- 205
+SE I G+ + D +P K + QF W+ IQ ++ G
Sbjct: 88 PILSEFCIELT--------GIKQAQVDEGVPLKICLSQFCKWIQMIQQKKKIIFAPGISN 139
Query: 206 -RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSE 262
+K AF T +WDL + +CK Q++ P WI+L+ + FY KP+
Sbjct: 140 PATSEVKSCAFVTWSDWDLGVCLEYECKRKQLRKPEILNSWIDLRATYKLFYMRKPK--- 196
Query: 263 ATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G+ G +++ + G H G+DD++N + RM+ DG ++IT N
Sbjct: 197 --GLSGALQDLGLKFSGQEHSGLDDSRNTAHLAWRMIGDGCIMKITKSLN 244
>gi|355557931|gb|EHH14711.1| hypothetical protein EGK_00679 [Macaca mulatta]
Length = 365
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 98/225 (43%), Gaps = 44/225 (19%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 141 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 198
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 199 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 250
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKD----------VFYNFYKPRKSEAT--------- 264
K +P QC+ + + YF +WINLK Y + ++ E T
Sbjct: 251 KVMLPGQCQYLGLPVADYFKQWINLKKGSSPGAASGASCYQSKEAQRKENTPGVKAYSFA 310
Query: 265 -------GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
G++ M K + G H GIDD KNI +++ + G
Sbjct: 311 MGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRG 355
>gi|326490993|dbj|BAK05596.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 92/213 (43%), Gaps = 22/213 (10%)
Query: 108 HKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
H+ QD DFFLV+D E E I+EFP +++D T F ++RP
Sbjct: 45 HQLQQDFDFFLVVDFEATCEKDARIYPQEIIEFPAVLVDGATGHLASAFRCYIRPKHHPA 104
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
+ K+ G D D + + ++ +AWL G R A T
Sbjct: 105 --LTKFCRDLTGIRQED---VDGGVDLGQALRLHDAWLKAATTTGAGTKRCDGRLAVVTW 159
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
G+WD +T + +C+ I+ P YF WINL+ F + G + + + +V
Sbjct: 160 GDWDCRTMLEFECRFKGIEKPSYFDRWINLRVPFQAALG-----SGGRVNLQEAVRVAGL 214
Query: 279 ---GSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G H G+DD +N R+L ++ G ++ IT
Sbjct: 215 DWEGRLHCGLDDARNTARLLADLMLRGVKMSIT 247
>gi|296219709|ref|XP_002756006.1| PREDICTED: ERI1 exoribonuclease 2 [Callithrix jacchus]
Length = 687
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T FH +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFHAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFAAGVSEPSTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+ AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VNLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIKDGCLMKITRSLNKVPTKKNSSIL 254
>gi|351710291|gb|EHB13210.1| Exonuclease domain-containing protein 1, partial [Heterocephalus
glaber]
Length = 684
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 107/239 (44%), Gaps = 39/239 (16%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T FH +V+P
Sbjct: 24 KSKQLYDYLIVIDFESTCWNDGKHHNNQEIIEFPAVLLNTSTGEIESEFHAYVQP----- 78
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------G 207
Q E G+ + D +P K + QF W+ H + ++ +
Sbjct: 79 QEHPVLSEFCMELTGIKQAQIDEGVPLKICLSQFCKWI--HKIQQEKKIVFTPGVSDPST 136
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 137 SEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLS 193
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT------ARRNPD--SRNV 318
G ++ + G H G+DD++N + +M+ DG ++IT ++NP +RN+
Sbjct: 194 GALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRCLKQVPKKNPSLLARNL 252
>gi|157870091|ref|XP_001683596.1| putative phosphotransferase [Leishmania major strain Friedlin]
gi|68126662|emb|CAJ04503.1| putative phosphotransferase [Leishmania major strain Friedlin]
Length = 582
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 97/224 (43%), Gaps = 30/224 (13%)
Query: 106 FQHKCSQDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
F + Q D ++VLD E E++EFP+++IDA+T V F R+VRP K
Sbjct: 47 FPYIAPQPFDAYVVLDFEATCEADRRISDAEVIEFPMVLIDARTATPVAEFQRYVRPVK- 105
Query: 157 SEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
N + + G+ + PF V + +L + L G ++
Sbjct: 106 -----NPVLSRFCTELTGITQDMVSRCDPFPVVYCEALQFLAEAGL---GDAPPMRSYCV 157
Query: 216 ATCGNWDLKTKVPDQCKVS-QIKLPPYFMEWINLKDVFYNFYKPRKSEA----------T 264
TCG+WDLKT +P Q +VS Q P F W NLK S +
Sbjct: 158 VTCGDWDLKTMLPAQMRVSGQQGTPLSFQRWCNLKKRMSQLGFGNGSGCGGGAAPPLGPS 217
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
GM M++ +P+ G H GIDD +N+ L +L G + +T
Sbjct: 218 GMPDMLQMLGLPLQGRQHSGIDDCRNLAAALCTLLRRGLVIDVT 261
>gi|389602001|ref|XP_001566397.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505274|emb|CAM39905.2| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 881
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
++ LVLD E E I+EFPV+++D + V FHRFVRP E ++ +
Sbjct: 631 EYLLVLDFEATCEEHPPHNYLHEIIEFPVVVVDVRLQRVVAEFHRFVRPRYKRE--LSSF 688
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G D DTA +EVI QFE W H L + R FAT G DL+
Sbjct: 689 CKRLTGMRQEDV---DTAASLEEVILQFERWF-SHTLPQHA------RCVFATDGPMDLR 738
Query: 225 TKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ Q I+ PP F ++I++K F F++ + + + M++ +P G H
Sbjct: 739 EFMYHHSVSRQGIRFPPLFYQFIDVKQTFACFFQCSQGK---IKAMLEALHLPFEGRLHS 795
Query: 284 GIDDTKNITRVLQRML 299
G+DD +NI ++ +L
Sbjct: 796 GLDDARNIASIVIGLL 811
>gi|296083880|emb|CBI24268.3| unnamed protein product [Vitis vinifera]
Length = 431
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T D F +VRP+ N
Sbjct: 163 QEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLEDSFQIYVRPT------CN 216
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ ++ D + E L+ H W + +G A T +W
Sbjct: 217 HLLSDFCKELTGIQQIQVDNGVLLSEA-------LLMHDRWLEQKGIKHTNFAVVTWSDW 269
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY---KPRKSEATGMMGMMKNRQVPMF 278
D + + +C+ +I+ PPYF WINLK F+ + + EA G++
Sbjct: 270 DCRVMLESECRFKRIRKPPYFNRWINLKVPFHEVFGNIRCNLKEAVQRAGLLWE------ 323
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G H G+DD KN R+L ++ G R IT
Sbjct: 324 GRAHCGLDDAKNTARLLAHIMHRGFRFSIT 353
>gi|389593757|ref|XP_003722127.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438625|emb|CBZ12384.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 502
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 104/245 (42%), Gaps = 55/245 (22%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
F+ +Q LV D E EI+EFPV+++D T+ V FHR+VRP +
Sbjct: 212 FKRLLAQPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLR- 270
Query: 157 SEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWL------------------- 196
N + + G+ + D A P V+ QF+ WL
Sbjct: 271 -----NPKLTAFCTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCWMWARHYGPNR 325
Query: 197 IQHHLWEKGR----GGHLKRA----------AFATCGNWDLKTKVPDQCKV--SQIKLPP 240
+ H+L + R H A AT G WD++ + QC V + PP
Sbjct: 326 LSHNLKSEQRRFVYDEHTDAAKANTSAEAMVCMATDGPWDMR-RFMHQCSVLRDGVDFPP 384
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+IN++ + + +K R+++ T M+ M + G H GIDDT+NI RVL + A
Sbjct: 385 VCYRYINVRHSYSDHFKCRQAKLTHMLKKM---SMSFEGRRHSGIDDTRNIARVLAELFA 441
Query: 301 DGARV 305
G RV
Sbjct: 442 RGYRV 446
>gi|322787625|gb|EFZ13665.1| hypothetical protein SINV_06869 [Solenopsis invicta]
Length = 254
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 42/203 (20%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q ++ LVLD E E I+E P ++ D+FH +V+P
Sbjct: 36 QKFEYLLVLDFEATCERYQVIKPQEIIELPCAVLSTHDWKLKDMFHSYVKPR-------- 87
Query: 163 KYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
+ F G+ + D F +V F WL + +G ++++F T
Sbjct: 88 --VHPTLTPFCTELTGIMQETVDGQPYFVDVFPIFCEWLTK-----RGYFDRPEKSSFVT 140
Query: 218 CGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG-----MMGMMKN 272
CGNWDLKT +P+QC + I P F +WI+LK +F E+TG + M+
Sbjct: 141 CGNWDLKTMLPNQCDLDGIAPPDQFKQWIDLKHMF--------CESTGYYPKSLKDMLAR 192
Query: 273 RQVPMFGSHHLGIDDTKNITRVL 295
+P+ G H GIDD KN+ ++
Sbjct: 193 LNMPLKGRLHSGIDDVKNMISIM 215
>gi|440793448|gb|ELR14631.1| exonuclease, putative [Acanthamoeba castellanii str. Neff]
Length = 927
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++D K ++ +V+P +H++ + G D V + P K
Sbjct: 44 EIIEFPWAVVDLKEAKVIEQRQLYVKPEWEENRHLSAFCTKLTGI--TDAVLAEQGQPLK 101
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
+ I F + H L ++ G AT G+WDL ++ + + +P + +I
Sbjct: 102 QCIAIFAQAM--HDLQQQDGGVDKDLICVATDGDWDLDVQLRGEAAAKGLDVPYHLQRFI 159
Query: 247 NLKDVFYNFYKP-RKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
N+++ FYKP R+ G+ +++ +P G HH GIDD NI +++ R+ ADG
Sbjct: 160 NVREEVSYFYKPGREHHIKGLKSLLRYLGLPHQGRHHSGIDDVLNICQIVLRLAADG 216
>gi|401416028|ref|XP_003872509.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488733|emb|CBZ23980.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 502
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
F+ +Q LV D E EI+EFPV+++D T+ V FHR+VRP +
Sbjct: 212 FKRLLAQPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLR- 270
Query: 157 SEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWL------------------- 196
N + + G+ + D A P V+ QF+ WL
Sbjct: 271 -----NPKLTAFCTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNR 325
Query: 197 IQHHLWEKGR----GGHLKRA----------AFATCGNWDLKTKVPDQCKV--SQIKLPP 240
+ H+L + R H A AT G WD++ + +C V + PP
Sbjct: 326 LSHNLKSEQRRFVYDEHTDAAKANTSAEAMVCMATDGPWDMR-RFMHECSVLRDGVAFPP 384
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+IN++ + + +K R+++ T M+ M + G H GIDDT+NI RVL + A
Sbjct: 385 VCYRYINVRHSYSDHFKCRQAKLTHMLKKM---SMSFEGRRHSGIDDTRNIARVLAELFA 441
Query: 301 DGARVQITARRNPDSRNVQYLFEDR 325
G RV + R +L DR
Sbjct: 442 RGYRVHHVSTIKYAHRGDAFLESDR 466
>gi|356548831|ref|XP_003542802.1| PREDICTED: uncharacterized protein LOC100811151 [Glycine max]
Length = 414
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 30/222 (13%)
Query: 99 LQVDAAAFQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHR 149
+ + A + + Q+ +F+V+D E EI+EFP +++ + T F
Sbjct: 122 INMVAQGYPREQYQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQT 181
Query: 150 FVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGH 209
+VRP+ Q ++ + + G + ++ D + E L++H W + +G
Sbjct: 182 YVRPT--CNQLLSDFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLEKKGIK 229
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGM 266
A T NWD + + +C+ +I+ PPYF WINL+ F + K EA +
Sbjct: 230 NSNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLRIPFREVFGAVKCNLKEAVEI 289
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G+ G H G+DD KN R+L ++ G + IT
Sbjct: 290 AGLAWQ------GRAHCGLDDAKNTARLLALLMHRGFKFSIT 325
>gi|225435848|ref|XP_002262814.1| PREDICTED: uncharacterized protein LOC100263388 [Vitis vinifera]
Length = 425
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 32/210 (15%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ +F+V+D E EI+EFP +++++ T D F +VRP+ N
Sbjct: 136 QEFQYFVVIDFEATCDKEKNPHPQEIIEFPSVLVNSMTGQLEDSFQIYVRPT------CN 189
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ ++ D + E L+ H W + +G A T +W
Sbjct: 190 HLLSDFCKELTGIQQIQVDNGVLLSEA-------LLMHDRWLEQKGIKHTNFAVVTWSDW 242
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY---KPRKSEATGMMGMMKNRQVPMF 278
D + + +C+ +I+ PPYF WINLK F+ + + EA G++
Sbjct: 243 DCRVMLESECRFKRIRKPPYFNRWINLKVPFHEVFGNIRCNLKEAVQRAGLLWE------ 296
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G H G+DD KN R+L ++ G R IT
Sbjct: 297 GRAHCGLDDAKNTARLLAHIMHRGFRFSIT 326
>gi|431908545|gb|ELK12140.1| Exonuclease domain-containing protein 1 [Pteropus alecto]
Length = 529
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 40/240 (16%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ FH +V+P E
Sbjct: 29 KSKQLFDYLIVIDFESTCWNEGKRHQSQEIIEFPAVLLNTSNGEIESEFHAYVQPQ---E 85
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------G 207
I + D+V D +P K + QF W+ H + ++ +
Sbjct: 86 HPILSEFCMELTGIKQDQV--DEGVPLKICLSQFCKWI--HKIQQEKKITFATGISDLST 141
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 142 SEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK--GLS 198
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT-------ARRNPD--SRNV 318
G ++ + G H G+DD++N + +M+ DG ++IT ++NP+ +RN+
Sbjct: 199 GALQEVGIEFLGREHSGLDDSRNTALLAWKMIRDGCSMKITRCLNKVPTKKNPNILARNL 258
>gi|426381460|ref|XP_004057358.1| PREDICTED: ERI1 exoribonuclease 2 [Gorilla gorilla gorilla]
Length = 691
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKKNSSIL 254
>gi|339249059|ref|XP_003373517.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970336|gb|EFV54297.1| conserved hypothetical protein [Trichinella spiralis]
Length = 747
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 90/199 (45%), Gaps = 30/199 (15%)
Query: 114 LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
L+ LVLD E EI+EFP + K V FH +VRP +++ +
Sbjct: 551 LENLLVLDFEATCDQPIQIEPQEIIEFPCVNFSLKEDRIVSQFHSYVRPE--VHPNLSSF 608
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
G D V + L EV+ QF+ WL + L + + TCG+WDL
Sbjct: 609 CTNLTG-IVQDMVNNQPTLT--EVLTQFDGWLAEQQLLTDEQR---DKWTMVTCGSWDLN 662
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG-----MMGMMKNRQVPMFG 279
++ +QCK +P YF WIN+K + N ATG ++ MM++ V G
Sbjct: 663 YQLRNQCKWMGHPVPLYFKSWINIKKIACN--------ATGNYPKSLIAMMQSLGVEHEG 714
Query: 280 SHHLGIDDTKNITRVLQRM 298
H GIDD KNI R +Q +
Sbjct: 715 RLHSGIDDVKNIVRTVQEL 733
>gi|332224715|ref|XP_003261514.1| PREDICTED: ERI1 exoribonuclease 2 [Nomascus leucogenys]
Length = 689
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKSCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKKNSSIL 254
>gi|195122902|ref|XP_002005949.1| GI18816 [Drosophila mojavensis]
gi|193911017|gb|EDW09884.1| GI18816 [Drosophila mojavensis]
Length = 223
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + ++ Y G +++ DT +P +
Sbjct: 29 EIIEFPAVLVNLKTGKIESEFHKYVMP--IESPRLSTYCTELTG---IEQKTVDTGVPLQ 83
Query: 187 EVIQQFEAWLIQHH------LWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + L AF T +WD + +C +++ P
Sbjct: 84 TALMMFHEWLRKELRSRNLILPKTSKSNLLGNCAFVTWTDWDFGICLHKECTRKRMRKAP 143
Query: 241 YFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
YF +W++++ ++ +YK R S+A +G+ G H GIDD KN+ ++ +
Sbjct: 144 YFNQWVDVRAIYREWYKYRPCNFSDALSHVGLA------FEGRAHSGIDDAKNLGALMYK 197
Query: 298 MLADGARVQITARRNP 313
M+ DGA IT P
Sbjct: 198 MVRDGALFSITKDLTP 213
>gi|218505680|ref|NP_001136197.1| ERI1 exoribonuclease 2 isoform 1 [Homo sapiens]
gi|190359336|sp|A8K979.2|ERI2_HUMAN RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|119587241|gb|EAW66837.1| similar to RIKEN cDNA 4933424N09 gene, isoform CRA_b [Homo sapiens]
Length = 691
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKKNFSIL 254
>gi|395514593|ref|XP_003761499.1| PREDICTED: ERI1 exoribonuclease 2 [Sarcophilus harrisii]
Length = 685
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 100/218 (45%), Gaps = 31/218 (14%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH- 160
Q D+ +++D E EI+EFP ++++ T F +V+P E+H
Sbjct: 33 QLFDYLIIIDFESTCWNDGKRHYSQEIIEFPAVLLNTLTGEIESEFQTYVQP----EEHP 88
Query: 161 -INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH-------LWEKGRGGHL 210
++K+ G+ + D +P K + QF W+ IQ +
Sbjct: 89 VLSKFC---VELTGIKQAQVDEGVPLKICLSQFCKWIQVIQQQKKIIFAPSVRDNSASDV 145
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMM 270
K AF T +WDL + +C+ Q++ P + W++L+ + FY+ RK + G+ G +
Sbjct: 146 KLCAFVTWSDWDLGVCLEYECRRKQLRKPVFLNSWVDLRATYKIFYR-RKPK--GLSGAL 202
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ + G H G+DD++N + RM+ DG ++IT
Sbjct: 203 QELGIEFSGREHSGLDDSRNTAHLAWRMIRDGCIMKIT 240
>gi|302844761|ref|XP_002953920.1| hypothetical protein VOLCADRAFT_44726 [Volvox carteri f.
nagariensis]
gi|300260732|gb|EFJ44949.1| hypothetical protein VOLCADRAFT_44726 [Volvox carteri f.
nagariensis]
Length = 201
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 27/205 (13%)
Query: 115 DFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
D FLVLDLE IEI+E L++DA ++A + F VRP++ ++ +
Sbjct: 1 DLFLVLDLEATCTKCRSLYPIEIIEVSALLLDAHSLATLGEFQSHVRPTE--HPLLDPFC 58
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG--GHLKRAAFATCGNWDL 223
G+++ DTA +V+ +F+ WL +G G G K T +WDL
Sbjct: 59 ---VELTGIEQEQVDTAPLLGDVLLRFQQWL-------EGLGAFGGAKSLLPVTWTDWDL 108
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K + +C Q+ PPY W NLK V Y R A+ + ++ + G H
Sbjct: 109 KICLETECGWRQLPRPPYLRRWCNLKRV----YGARYRRASSLQKCVEALGLRWQGRAHN 164
Query: 284 GIDDTKNITRVLQRMLADGARVQIT 308
G+DD++N + RM+ DG + +T
Sbjct: 165 GLDDSRNTAMLAVRMVRDGCVLTVT 189
>gi|326925262|ref|XP_003208837.1| PREDICTED: ERI1 exoribonuclease 3-like [Meleagris gallopavo]
Length = 484
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 107/250 (42%), Gaps = 39/250 (15%)
Query: 76 QGKCTMMDDVMHLEKFNHDISRDLQ-----VDAAAFQHKCSQDLDFFLVLDLEGKI---- 126
Q C ++ + L+ + ISR L AA Q +FLVLD E
Sbjct: 120 QAVCLLLPAAL-LKGYGSIISRKLASHGFGASMAAMSSFPPQRYHYFLVLDFEATCDKPQ 178
Query: 127 ----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHINKYIEGKYGKFGVDRV 177
EI+EFP+L ++ +TM FH +V+P + + I+G
Sbjct: 179 IHPQEIIEFPILKLNGRTMEIESTFHMYVQPVVHPQLTPFCTELTGIIQGMV-------- 230
Query: 178 WHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIK 237
D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC+ +
Sbjct: 231 --DGQPSLQQVLERVDEWMAKEGLLDPS-----VKSIFVTCGDWDLKVMLPGQCQYLGLP 283
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDD---TKNITRV 294
+ YF +WINLK Y+F G++ M K + G H GI+ + +R
Sbjct: 284 VADYFKQWINLKKA-YSFAM-GSWPKNGLLDMNKGLNLQHIGRPHSGIEKELAERPRSRA 341
Query: 295 LQRMLADGAR 304
+ AD +R
Sbjct: 342 HSSLPADPSR 351
>gi|440798690|gb|ELR19757.1| hypothetical protein ACA1_201140 [Acanthamoeba castellanii str.
Neff]
Length = 219
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 12/147 (8%)
Query: 121 DLEGK---IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRV 177
+LEG EI E PV +++ T+ D FHR+ RP +++ + +Y++ KYG G
Sbjct: 79 ELEGGEWVYEITELPVTLLNCTTLKVEDRFHRYCRPERITPAVLQRYVDRKYGDMGQAES 138
Query: 178 WHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHL-KRAAFATCGNWDLKTKVPDQCKVSQI 236
WH+ A+ + + E WL + L + AF TCG+WD K +P +++
Sbjct: 139 WHEGAVSLQTALHDLERWLREKDLLLGDNADEQPAKFAFITCGDWDFKNALP---RIATC 195
Query: 237 KLPPYFMEWINLKDVFYNFYKPRKSEA 263
P IN+K V+ FYK R+ A
Sbjct: 196 WACP-----INVKTVYQKFYKTRRPPA 217
>gi|332845430|ref|XP_003315043.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Pan troglodytes]
gi|410218774|gb|JAA06606.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
gi|410257124|gb|JAA16529.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
gi|410290502|gb|JAA23851.1| ERI1 exoribonuclease family member 2 [Pan troglodytes]
Length = 691
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 29/234 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSASE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKKNSSIL 254
>gi|170053941|ref|XP_001862902.1| exonuclease [Culex quinquefasciatus]
gi|167874372|gb|EDS37755.1| exonuclease [Culex quinquefasciatus]
Length = 369
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 119/293 (40%), Gaps = 30/293 (10%)
Query: 39 CAQHISCSCSASSSSSSSSTHQKGASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRD 98
C + SC S KG +T L+ G ++ + E N S+
Sbjct: 83 CINAVGASCGELKLSDVVLVKSKGFTTLDGLGNLHSVTGSIGAVETIRVTEMAN---SQQ 139
Query: 99 LQVDAAAFQHKCSQDLDFFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLF 147
A + +Q + +V+D E EI+EFP ++++ T F
Sbjct: 140 PHQSAPSASKYSTQTFRYLVVMDFEATCWPEQDMKWKTHEIIEFPAVLLNMVTGQVEAQF 199
Query: 148 HRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG-- 205
+FV P + ++++ K D+V + +P K + F WL Q L E+G
Sbjct: 200 QQFVMP--VENPRLSEFCT-KLTGIRQDQV--EGGVPLKTCLPLFGKWLKQV-LGERGLV 253
Query: 206 -----RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK 260
G AFAT +WD + +C +I+ P F +WI+++ ++ FY+ R
Sbjct: 254 LPKTDPGNQSGSVAFATWSDWDFGKCLSKECTRKRIEKPACFDQWIDVRAIYMKFYQHR- 312
Query: 261 SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+ R + G H G+DD+KN+ R++ RM DGA IT P
Sbjct: 313 --PLNFGEALDKRGLGFEGRPHSGLDDSKNLARLITRMCKDGANFVITKDLRP 363
>gi|398018615|ref|XP_003862472.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500702|emb|CBZ35779.1| hypothetical protein, conserved [Leishmania donovani]
Length = 502
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
F+ +Q LV D E EI+EFPV+++D T+ V FHR+VRP +
Sbjct: 212 FKRLLAQPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLR- 270
Query: 157 SEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWL------------------- 196
N + + G+ + D A P V+ QF+ WL
Sbjct: 271 -----NPKLTAFCTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNR 325
Query: 197 IQHHLWEKGR----GGHLKRA----------AFATCGNWDLKTKVPDQCKV--SQIKLPP 240
+ H+L + R H A AT G WD++ + +C V + PP
Sbjct: 326 LSHNLKSEQRRFVYDEHTDAAKANTSAEAMICMATDGPWDMR-RFMHECSVLRDGVDFPP 384
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+IN++ + + +K R+++ T M+ M + G H GIDDT+NI RVL + A
Sbjct: 385 VCYRYINVRHSYSDHFKCRQAKLTHMLKKM---SMSFEGRRHSGIDDTRNIARVLAELFA 441
Query: 301 DGARVQITARRNPDSRNVQYLFEDR 325
G RV + R +L DR
Sbjct: 442 RGYRVHHVSTIKYAHRGDAFLESDR 466
>gi|432119658|gb|ELK38559.1| ERI1 exoribonuclease 2 [Myotis davidii]
Length = 698
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 34/229 (14%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+ +V+D E EI+EFP ++++ T FH +V+P Q
Sbjct: 45 QLFDYLIVIDFESTCWEEGKRHRTQEIIEFPAVLLNTSTGEIESEFHAYVQP-----QEH 99
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKGRG----GHLKR 212
E G+ + D +P K + QF W+ +Q ++ G +K
Sbjct: 100 PILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIQKVQQQKKIIFATGVSDLPTSEVKL 159
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKN 272
AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G ++
Sbjct: 160 CAFVTWSDWDLGVCLEYECKRKQLFKPVFLNAWIDLRVTYKIFYR-RKPK--GLSGALQE 216
Query: 273 RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT-------ARRNPD 314
+ G H G+DD++N + +M+ DG ++IT ++NP+
Sbjct: 217 VGIEFLGREHSGLDDSRNTALLAWKMIRDGCLMKITRSWNKVHTKKNPN 265
>gi|146092927|ref|XP_001466575.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070938|emb|CAM69614.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 502
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 55/265 (20%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
F+ +Q LV D E EI+EFPV+++D T+ V FHR+VRP +
Sbjct: 212 FKRLLAQPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLR- 270
Query: 157 SEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWL------------------- 196
N + + G+ + D A P V+ QF+ WL
Sbjct: 271 -----NPKLTAFCTELTGITQEMVDVADPLPTVVAQFQDWLKTEVYPLCRMWARHYGPNR 325
Query: 197 IQHHLWEKGR----GGHLKRA----------AFATCGNWDLKTKVPDQCKV--SQIKLPP 240
+ H+L + R H A AT G WD++ + +C V + PP
Sbjct: 326 LSHNLKSEQRRFVYDEHTDAAKANTSAEAMICMATDGPWDMR-RFMHECSVLRDGVDFPP 384
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+IN++ + + +K R+++ T M+ M + G H GIDDT+NI RVL + A
Sbjct: 385 VCYRYINVRHSYSDHFKCRQAKLTHMLKKM---SMSFEGRRHSGIDDTRNIARVLAELFA 441
Query: 301 DGARVQITARRNPDSRNVQYLFEDR 325
G RV + R +L DR
Sbjct: 442 RGYRVHHVSTIKYAHRRDAFLESDR 466
>gi|74141341|dbj|BAE35962.1| unnamed protein product [Mus musculus]
Length = 636
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 116 FFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+ +V+D E EI+EFP ++++ T FH +V+P Q
Sbjct: 36 YLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQP-----QEHPILS 90
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK-----------GRGGHLKRAA 214
E G+ +V D +P K + QF W+ H L ++ +K A
Sbjct: 91 EFCTELTGIKQVQVDEGVPLKICLSQFCKWI--HKLQQQQTISFAAGDSEPSTSEVKLCA 148
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
F T +WDL + +C+ Q+ P + WI+L+ + FYK RK + G+ G ++
Sbjct: 149 FVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYK-RKPK--GLSGALQEVG 205
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+ G H G+DD++N + +M+ DG ++IT N
Sbjct: 206 IEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLN 243
>gi|242078557|ref|XP_002444047.1| hypothetical protein SORBIDRAFT_07g006360 [Sorghum bicolor]
gi|241940397|gb|EES13542.1| hypothetical protein SORBIDRAFT_07g006360 [Sorghum bicolor]
Length = 287
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 22/209 (10%)
Query: 114 LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
DFF+V+D E EI+EFP +++D T + F +VRP +H +
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRP-----RHHPRL 56
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D + E ++ + WL H G L + A T G+WD +
Sbjct: 57 TDFCRDLTGITQGDVDAGVSLAEALEMHDHWLEAH-------GAKLGKLAVVTWGDWDCR 109
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
T + +C+ I+ P YF WINL+ F + T + ++ + G H G
Sbjct: 110 TMLEGECRFKGIEKPHYFDHWINLRLPFSAAFGVGNVRFT-LQDAIRKAGLQWEGRLHCG 168
Query: 285 IDDTKNITRVLQRMLADGARVQITARRNP 313
+DD N +L ++ G ++ITA P
Sbjct: 169 LDDALNTAHLLVELMRRGTLLKITASLAP 197
>gi|195382354|ref|XP_002049895.1| GJ21843 [Drosophila virilis]
gi|194144692|gb|EDW61088.1| GJ21843 [Drosophila virilis]
Length = 286
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P + ++ Y G +++ DT +P +
Sbjct: 92 EIIEFPAVLVNLKTGKIEAEFHKYIMP--IESPRLSTYCTELTG---IEQKTVDTGVPLQ 146
Query: 187 EVIQQFEAWLIQHH------LWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + L AF T +WD + +C +++ P
Sbjct: 147 TALMMFHEWLRKELRARNLLLPKMSKSNILGNCAFVTWTDWDFGICLHKECTRKRMRKAP 206
Query: 241 YFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
YF +WI+++ V+ +YK R S+A +G+ G H GIDD KN+ ++ +
Sbjct: 207 YFNQWIDVRAVYREWYKYRPCNFSDALSHVGLA------FEGRAHSGIDDAKNLGALMCK 260
Query: 298 MLADGARVQITARRNP 313
M+ DGA IT P
Sbjct: 261 MVRDGALFSITKDLTP 276
>gi|195585608|ref|XP_002082573.1| GD11641 [Drosophila simulans]
gi|194194582|gb|EDX08158.1| GD11641 [Drosophila simulans]
Length = 281
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 16/194 (8%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P + ++ Y G + + D+ +P
Sbjct: 87 EIIEFPAVLVNLKTGKIESEFHQYILP--IESPRLSTYCTELTG---IQQKTVDSGIPLT 141
Query: 187 EVIQQFEAWLIQHHLWEKG-------RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
I F WL +H + + + L AF T +WD + +C I+ P
Sbjct: 142 TAIVMFNEWL-RHEIRTRNLTLPKMNKSNVLGNCAFVTWTDWDFGICLAKECNRKGIRKP 200
Query: 240 PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRML 299
YF +WI+++ ++ ++YK R T + + + G H GIDD KN+ ++ +M+
Sbjct: 201 AYFNQWIDVRAIYRSWYKYRPCNFTDALSHVG---LAFEGRAHSGIDDAKNLGALMCKMM 257
Query: 300 ADGARVQITARRNP 313
DGA IT P
Sbjct: 258 RDGALFSITKDLTP 271
>gi|195027065|ref|XP_001986404.1| GH20546 [Drosophila grimshawi]
gi|193902404|gb|EDW01271.1| GH20546 [Drosophila grimshawi]
Length = 288
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P ++ Y G +D+ D+ +P +
Sbjct: 94 EIIEFPAVLVNLKTGKIEAEFHKYIMP--FESPRLSTYCTELTG---IDQKTVDSGVPLQ 148
Query: 187 EVIQQFEAWLIQHH------LWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + L AF T +WD + +C +++ P
Sbjct: 149 TALMMFHEWLRKELRARNLLLPKMAKSNILGNCAFVTWTDWDFGICLHKECSRKRMRKAP 208
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ ++ +YK R T + + + G H GIDD KN+ ++ +M+
Sbjct: 209 YFNQWIDVRAIYREWYKYRPCNFTDALSHVG---LAFEGRAHSGIDDAKNLGALMCKMVR 265
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 266 DGALFSITKDLTP 278
>gi|221330522|ref|NP_726151.2| snipper, isoform G [Drosophila melanogaster]
gi|159884093|gb|ABX00725.1| IP11159p [Drosophila melanogaster]
gi|220902332|gb|AAM68201.2| snipper, isoform G [Drosophila melanogaster]
Length = 384
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P ++ Y G + + D+ +P +
Sbjct: 190 EIIEFPAVLVNLKTGKIEAEFHQYILP--FESPRLSAYCTELTG---IQQKTVDSGMPLR 244
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
I F WL L + + L AF T +WD + +C I+ P
Sbjct: 245 TAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTWTDWDFGICLAKECSRKGIRKPA 304
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ ++ ++YK R T + + + G H GIDD KN+ ++ +M+
Sbjct: 305 YFNQWIDVRAIYRSWYKYRPCNFTDALSHVG---LAFEGKAHSGIDDAKNLGALMCKMVR 361
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 362 DGALFSITKDLTP 374
>gi|321478169|gb|EFX89127.1| hypothetical protein DAPPUDRAFT_41461 [Daphnia pulex]
Length = 231
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 101/230 (43%), Gaps = 32/230 (13%)
Query: 96 SRDLQVDAAAFQHKCSQDLDFFLVLDLEGKI------------EILEFPVLMIDAKTMAF 143
S+ L+ + K + D+++V+D E EI+EFP ++++ T
Sbjct: 8 SKVLRKRLEMYNKKTIEMFDYYVVIDYEATCDENHNNFDKNNQEIIEFPAVLLNCHTGKV 67
Query: 144 VDLFHRFVRPSKMSEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLW 202
F + RP IN + K G+ + D A F +V+ FE WL
Sbjct: 68 EAEFQSYCRPV------INPLLTKYCIKLTGITQNIVDKAPSFHDVLASFEKWL------ 115
Query: 203 EKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK----- 257
+K + G A T G+ D+ + QC +SQI +P Y WIN++ F NFY+
Sbjct: 116 QKKKLGSEYSFAILTDGSKDVGHFLKRQCVLSQIDIPEYCKYWINIRKSFTNFYQTNDLQ 175
Query: 258 --PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARV 305
R + T + M+K G H G+DD +NI V Q +L DGA +
Sbjct: 176 YFARLANDTVLNIMIKEIGCKFQGKPHSGLDDARNIAYVAQCLLQDGASL 225
>gi|328787319|ref|XP_003250924.1| PREDICTED: ERI1 exoribonuclease 3-like, partial [Apis mellifera]
Length = 241
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 29/155 (18%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q ++ LVLD E EI+E P + K+ V++FH +++P
Sbjct: 94 QHFNYLLVLDFECTCKKYEKIEPQEIIELPCAAVCTKSWEIVNMFHEYIKPK-------- 145
Query: 163 KYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
+ + F G+ + D F EV +F WL +H+ ++ G +AF
Sbjct: 146 --VHPQLTPFCTQLTGIIQDMVDNESHFSEVFMKFCNWLEEHNYFKNGND-----SAFVI 198
Query: 218 CGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF 252
CG+WDLK +P QCK+ I P +FM+WINLK F
Sbjct: 199 CGDWDLKFMLPAQCKLENISFPTHFMKWINLKGAF 233
>gi|61098180|ref|NP_081974.3| ERI1 exoribonuclease 2 [Mus musculus]
gi|81888440|sp|Q5BKS4.1|ERI2_MOUSE RecName: Full=ERI1 exoribonuclease 2; AltName: Full=Exonuclease
domain-containing protein 1
gi|60688299|gb|AAH90961.1| Exonuclease domain containing 1 [Mus musculus]
gi|74138480|dbj|BAE38055.1| unnamed protein product [Mus musculus]
gi|74189274|dbj|BAE22676.1| unnamed protein product [Mus musculus]
Length = 688
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 116 FFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+ +V+D E EI+EFP ++++ T FH +V+P Q
Sbjct: 36 YLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQP-----QEHPILS 90
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK-----------GRGGHLKRAA 214
E G+ +V D +P K + QF W+ H L ++ +K A
Sbjct: 91 EFCTELTGIKQVQVDEGVPLKICLSQFCKWI--HKLQQQQTISFAAGDSEPSTSEVKLCA 148
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
F T +WDL + +C+ Q+ P + WI+L+ + FYK RK + G+ G ++
Sbjct: 149 FVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYK-RKPK--GLSGALQEVG 205
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+ G H G+DD++N + +M+ DG ++IT N
Sbjct: 206 IEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLN 243
>gi|398018617|ref|XP_003862473.1| hypothetical protein, conserved [Leishmania donovani]
gi|322500703|emb|CBZ35780.1| hypothetical protein, conserved [Leishmania donovani]
Length = 880
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 115 DFFLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ LVLD E EI+EFPV+++DA+ V FHRFVRP E ++ +
Sbjct: 630 DYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRYKRE--LSPF 687
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G D DTA +EVI+QFE WL H L R F T G DL+
Sbjct: 688 CQKLTGMRQEDV---DTAASLEEVIRQFERWL-SHTLPPHA------RCMFVTDGPMDLR 737
Query: 225 TKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ Q I+ P F ++I++K F F++ + + M+ ++ +P G H
Sbjct: 738 EFMYYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVL---HLPFEGRLHS 794
Query: 284 GIDDTKNITRVLQRML 299
G+DD +NI ++ +L
Sbjct: 795 GLDDARNIASIVIGLL 810
>gi|71755417|ref|XP_828623.1| phosphotransferase [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834009|gb|EAN79511.1| phosphotransferase, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 540
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 95/224 (42%), Gaps = 37/224 (16%)
Query: 115 DFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
D ++VLD E E ++EFP++++DA+ + F ++VRP +
Sbjct: 32 DTYMVLDFEATCERHQRLEVPEVIEFPIVLVDARNGNTISEFQQYVRP----------VV 81
Query: 166 EGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
+ +F G+ + D A F +V +L Q++ E+ KR TCG+
Sbjct: 82 NPQLSQFCTELTGITQSVVDRASTFPDVFTAAMNYLHQNNCGEREIN---KRYLPVTCGD 138
Query: 221 WDLKTKVPDQCKVS-----QIKLPPYFMEWINLKDVFYNFYKPRKSEATG-----MMGMM 270
WDLKT +P Q K + +PP W N+K P + + MM
Sbjct: 139 WDLKTMLPIQVKACIQQGFTVNVPPSLRRWFNIKQYMQRVLSPGLGQTVSQPIRDLPDMM 198
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPD 314
+ M G HH GIDD +NI VL ++ G + T N +
Sbjct: 199 SVLGLEMKGRHHSGIDDCRNIAAVLCELIKLGHVITPTTDYNSE 242
>gi|146092929|ref|XP_001466576.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070939|emb|CAM69615.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 880
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 94/196 (47%), Gaps = 26/196 (13%)
Query: 115 DFFLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ LVLD E EI+EFPV+++DA+ V FHRFVRP E ++ +
Sbjct: 630 DYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRYKRE--LSPF 687
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G D DTA +EVI+QFE WL H L R F T G DL+
Sbjct: 688 CQKLTGMRQEDV---DTAASLEEVIRQFERWL-SHTLPPHA------RCMFVTDGPMDLR 737
Query: 225 TKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ Q I+ P F ++I++K F F++ + + M+ ++ +P G H
Sbjct: 738 EFMYYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVL---HLPFEGRLHS 794
Query: 284 GIDDTKNITRVLQRML 299
G+DD +NI ++ +L
Sbjct: 795 GLDDARNIASIVIGLL 810
>gi|432847752|ref|XP_004066132.1| PREDICTED: ERI1 exoribonuclease 2-like [Oryzias latipes]
Length = 504
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 32/220 (14%)
Query: 111 SQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
+Q + +V+D E EI+EFP ++++ T FH FV+P Q
Sbjct: 29 NQIFSYLIVIDFESTCWREKNTSSQEIIEFPAVLLNTSTGDIDSEFHTFVQP-----QEH 83
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLW--------EKGRGGHL--- 210
E G+ +V + LP + + +F WL L ++G L
Sbjct: 84 PTLSEFCTELTGITQVQVEAGLPLQICLSRFTRWLQSLQLEMGFTFPNKQQGSSSSLSTQ 143
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMMG 268
K F T +WDL + +CK Q+ P F WI+L+ + +Y KP+ G+ G
Sbjct: 144 KLCTFLTWSDWDLGVCLQYECKRKQLHKPDVFNNWIDLRSTYRLWYNRKPK-----GLNG 198
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+++ + G H G+DD +N R+ +M+ DG ++IT
Sbjct: 199 ALQDLGLQFDGREHSGLDDARNTARLAAKMMRDGCVMKIT 238
>gi|389593759|ref|XP_003722128.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438626|emb|CBZ12385.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 880
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 95/199 (47%), Gaps = 26/199 (13%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
++ LVLD E E I+EFPV+++DA+ V FHRFVRP E ++ +
Sbjct: 630 EYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDARLQRVVAEFHRFVRPRYKRE--LSSF 687
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G D DTA +EVI+QFE WL H L R F T G DL+
Sbjct: 688 CKKLTGMRQEDV---DTAASLEEVIRQFERWL-SHTLPPH------ARCMFVTDGPMDLR 737
Query: 225 TKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ Q I+ P F ++I++K F F++ + + M+ +M +P G H
Sbjct: 738 EFMYYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVM---HLPFEGRLHS 794
Query: 284 GIDDTKNITRVLQRMLADG 302
G+DD +NI ++ +L G
Sbjct: 795 GLDDARNIASIVIGLLHHG 813
>gi|338712792|ref|XP_003362770.1| PREDICTED: ERI1 exoribonuclease 2 [Equus caballus]
Length = 689
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T FH +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHQSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEHPI 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHH-----LWEKGRG--- 207
+SE + G+ + D +P K + QF W+ + + G
Sbjct: 89 LSEFCVELT--------GIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKITFASGVADLS 140
Query: 208 -GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
+K AF T +WDL + +CK Q+ P + WI+L+ + FYK RK + G+
Sbjct: 141 TSEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYK-RKPK--GL 197
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT--ARRNPDSRNVQYL 321
G ++ + G H G+DD++N + +M+ DG ++IT ++ P +N L
Sbjct: 198 SGALQEVGLEFLGREHSGLDDSRNTALLAWKMIRDGCFMKITRPLKKVPTKKNPNIL 254
>gi|401422814|ref|XP_003875894.1| putative phosphotransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492134|emb|CBZ27408.1| putative phosphotransferase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 584
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 112 QDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q D ++VLD E E++EFP++++DA+T V F R+VRP K ++
Sbjct: 53 QPFDAYVVLDFEATCEADRRIADAEVIEFPMVLVDARTATPVAEFQRYVRPVK--NPVLS 110
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
++ G D V PF V + +L + L G ++ TCG+WD
Sbjct: 111 RFCTELTG-ITQDMVRGRD--PFPMVYCEALQFLAEAGL---GDAPPMRSYCVVTCGDWD 164
Query: 223 LKTKVPDQCKVS-QIKLPPYFMEWINLKDVFYNFYKPRKSEATG---------MMGMMKN 272
LKT +P Q +VS Q P F W NLK S G + M++
Sbjct: 165 LKTMLPAQLRVSGQQGTPLSFQRWCNLKKCMSQLGFGNGSGGGGPAPPLGLSWIPDMLQM 224
Query: 273 RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+PM G HH GIDD +N+ VL +L G + +T P
Sbjct: 225 VGLPMQGRHHSGIDDCRNLAAVLCALLRRGLVIDVTFSSTP 265
>gi|449476440|ref|XP_002192871.2| PREDICTED: ERI1 exoribonuclease 2 [Taeniopygia guttata]
Length = 451
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 118 LVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRV 177
L + EG+ +EFP ++++ T A FH +V+P Q E G+ +
Sbjct: 19 LGIAFEGREHSVEFPAVLLNTSTGAIESEFHMYVQP-----QEHPILSEFCTELTGITQN 73
Query: 178 WHDTALPFKEVIQQFEAWLIQHHLWEK---------GRGGHLKRAAFATCGNWDLKTKVP 228
D +P + QF W+ + +K K AF T +WDL +
Sbjct: 74 QVDQGVPLNICLSQFLKWVQKLQKEKKITFSTDSQSNSTSEAKACAFVTWTDWDLGVCLH 133
Query: 229 DQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMMGMMKNRQVPMFGSHHLGID 286
+CK Q++ P WI+LK + FY KP+ G+ G +++ + G H G+D
Sbjct: 134 YECKRKQLRKPDILNSWIDLKATYRAFYNRKPK-----GLNGALQDLGIAFEGREHSGLD 188
Query: 287 DTKNITRVLQRMLADGARVQIT 308
D++N R+ R++ DG +++T
Sbjct: 189 DSRNTARLAWRLICDGCVLKVT 210
>gi|118387765|ref|XP_001026985.1| exonuclease family protein [Tetrahymena thermophila]
gi|89308755|gb|EAS06743.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 251
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 111 SQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFV-DLFHRFVRPSKMSEQH 160
+ D DF L+LD E EI+EFP++++D K + + FH +V+P+
Sbjct: 15 NHDFDFLLILDFEATCSNDEKLNVQEIIEFPIVILDLKKNVILPEYFHTYVKPT--YHPI 72
Query: 161 INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
+ K+ + ++V D + + IQQ + +L G K+ AF CG+
Sbjct: 73 LTKFC-TELTHITQEQV--DNGVILESAIQQADEFL-------NKMGIIDKKFAFVCCGD 122
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF----YNFYKPRKSEATGMMGMMKNRQVP 276
+DL + + K +I P YF ++IN+K F Y + ++ GM+ M+K +
Sbjct: 123 FDLGQCLRLEAKFKKINYPQYFKQYINIKKQFPKEWYTESIIKWNKPPGMVAMLKAINLE 182
Query: 277 MFGSHHLGIDDTKNITRVLQRML 299
+ G+HH G+DD+KNI R+ Q M+
Sbjct: 183 LQGTHHSGLDDSKNIARIAQFMV 205
>gi|24657520|ref|NP_726149.1| snipper, isoform F [Drosophila melanogaster]
gi|24657528|ref|NP_726150.1| snipper, isoform E [Drosophila melanogaster]
gi|10727027|gb|AAF46791.2| snipper, isoform E [Drosophila melanogaster]
gi|21626519|gb|AAM68200.1| snipper, isoform F [Drosophila melanogaster]
Length = 223
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P ++ Y G + + D+ +P +
Sbjct: 29 EIIEFPAVLVNLKTGKIEAEFHQYILP--FESPRLSAYCTELTG---IQQKTVDSGMPLR 83
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
I F WL L + + L AF T +WD + +C I+ P
Sbjct: 84 TAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTWTDWDFGICLAKECSRKGIRKPA 143
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ ++ ++YK R T + + + G H GIDD KN+ ++ +M+
Sbjct: 144 YFNQWIDVRAIYRSWYKYRPCNFTDALSHVG---LAFEGKAHSGIDDAKNLGALMCKMVR 200
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 201 DGALFSITKDLTP 213
>gi|28573607|ref|NP_611632.3| snipper, isoform D [Drosophila melanogaster]
gi|16769080|gb|AAL28759.1| LD16074p [Drosophila melanogaster]
gi|28380656|gb|AAM68199.2| snipper, isoform D [Drosophila melanogaster]
gi|220943044|gb|ACL84065.1| CG42257-PD [synthetic construct]
gi|220953182|gb|ACL89134.1| CG42257-PD [synthetic construct]
Length = 281
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P ++ Y G + + D+ +P +
Sbjct: 87 EIIEFPAVLVNLKTGKIEAEFHQYILP--FESPRLSAYCTELTG---IQQKTVDSGMPLR 141
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
I F WL L + + L AF T +WD + +C I+ P
Sbjct: 142 TAIVMFNEWLRNEMRARNLTLPKMNKSNILGNCAFVTWTDWDFGICLAKECSRKGIRKPA 201
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ ++ ++YK R T + + + G H GIDD KN+ ++ +M+
Sbjct: 202 YFNQWIDVRAIYRSWYKYRPCNFTDALSHVG---LAFEGKAHSGIDDAKNLGALMCKMVR 258
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 259 DGALFSITKDLTP 271
>gi|348540662|ref|XP_003457806.1| PREDICTED: ERI1 exoribonuclease 2-like [Oreochromis niloticus]
Length = 628
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 99/220 (45%), Gaps = 34/220 (15%)
Query: 111 SQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH- 160
+Q + +V+D E EI+EFP ++++ T FH +V+P ++H
Sbjct: 29 NQVFSYLIVIDFESTCWREKNNRSQEIIEFPAVLLNTSTGEVESEFHTYVQP----QEHP 84
Query: 161 -INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLW---------EKGRGGHL 210
++ + G + ++ + +P + + +F WL L ++ G
Sbjct: 85 ILSDFCTELTG---ITQMQVEAGIPLQICLSRFSRWLQNLQLEMGVAFANKDQRCSGPSQ 141
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMMG 268
K F T +WDL + +CK Q+ P WI+L+ + FY KP+ G+ G
Sbjct: 142 KLCTFLTWSDWDLGVCLQYECKRKQLHKPDVLNSWIDLRSTYRLFYNRKPK-----GLNG 196
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+++ + G H G+DD +N ++ RM+ DG ++IT
Sbjct: 197 ALQDLGIQFSGREHSGLDDARNTAQLAARMMRDGCIMKIT 236
>gi|383415517|gb|AFH30972.1| ERI1 exoribonuclease 2 isoform 1 [Macaca mulatta]
Length = 690
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|355756611|gb|EHH60219.1| ERI1 exoribonuclease 2 [Macaca fascicularis]
Length = 690
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|297283615|ref|XP_001084714.2| PREDICTED: ERI1 exoribonuclease 2-like [Macaca mulatta]
gi|355710023|gb|EHH31487.1| ERI1 exoribonuclease 2 [Macaca mulatta]
Length = 690
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|402907864|ref|XP_003916681.1| PREDICTED: LOW QUALITY PROTEIN: ERI1 exoribonuclease 2 [Papio
anubis]
Length = 690
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 99/223 (44%), Gaps = 27/223 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGH 209
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPSTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 201 LQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|71397756|ref|XP_802533.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70863734|gb|EAN81087.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 210
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 26/182 (14%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDT 181
EI+EFPV+M+D + V FH FV+P + K +F G+ + D
Sbjct: 2 EIIEFPVVMVDVRLQRAVAEFHHFVKPK----------VNPKLSEFCRQLTGIRQEDIDN 51
Query: 182 ALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQ-IKLPP 240
ALP ++VI++FE W H G R AT G DLK + Q I+ P
Sbjct: 52 ALPLEDVIRRFERW----HAQTVPPGS---RTMLATDGPTDLKEFMYIHSVSRQGIRFPS 104
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
F +WI++K F +F++ ++ + M+ + P G H GIDD +N+ ++ RML
Sbjct: 105 MFYQWIDVKRFFAHFFQCQQGKIKAMLDAL---NCPFEGRLHSGIDDARNVATIVIRMLK 161
Query: 301 DG 302
G
Sbjct: 162 LG 163
>gi|261334507|emb|CBH17501.1| phosphotransferase, putative [Trypanosoma brucei gambiense DAL972]
Length = 540
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 94/224 (41%), Gaps = 37/224 (16%)
Query: 115 DFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
D ++VLD E E ++EFP++++DA+ + F ++VRP +
Sbjct: 32 DTYMVLDFEATCERHQRLEVPEVIEFPIVLVDARNGNTISEFQQYVRP----------VV 81
Query: 166 EGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
+ +F G+ + D A F +V +L Q++ E KR TCG+
Sbjct: 82 NPQLSEFCTELTGITQSVVDRASTFPDVFTAAMNYLHQNNCGETEIN---KRYLPVTCGD 138
Query: 221 WDLKTKVPDQCKVS-----QIKLPPYFMEWINLKDVFYNFYKPRKSEATG-----MMGMM 270
WDLKT +P Q K + +PP W N+K P + + MM
Sbjct: 139 WDLKTMLPIQVKACIQQGFTVNVPPSLRRWFNIKQYMQRVLSPGLGQTVSQPIHDLPDMM 198
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPD 314
+ M G HH GIDD +NI VL ++ G + T N +
Sbjct: 199 SVLGLEMKGRHHSGIDDCRNIAAVLCELIKLGHVITPTTDYNSE 242
>gi|154340886|ref|XP_001566396.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063719|emb|CAM39904.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 508
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 104/245 (42%), Gaps = 55/245 (22%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
F+ +Q LV D E EI+EFPV+++D T+ V FHR+VRP +
Sbjct: 218 FKRLLAQPFSHVLVCDFEATCASGSVHYPHEIIEFPVVVLDTATLRIVAEFHRYVRPLR- 276
Query: 157 SEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWL------------------- 196
N + + G+ + D A P V+ QF+ WL
Sbjct: 277 -----NPKLTAFCTELTGITQEMVDLADPLPMVVAQFQDWLRTEVYPLCRMWARHYGPNH 331
Query: 197 IQHHLWEKGRG---GHLKRAA-----------FATCGNWDLKTKVPDQCKVSQ--IKLPP 240
+ H+L + R L AA AT G WD++ + +C V + + PP
Sbjct: 332 LSHNLKSEQRRFVYDELTDAAKANVSAEAMLCMATDGPWDMR-RFMHECSVLRDGVDFPP 390
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+IN++ + + +K R+ T M+ M + G H GIDDT+NI RVL + A
Sbjct: 391 VCYRYINIRHSYSHHFKCRQVRLTHMLKQMS---MSFEGRRHSGIDDTRNIARVLAELFA 447
Query: 301 DGARV 305
G RV
Sbjct: 448 RGYRV 452
>gi|297298942|ref|XP_002805307.1| PREDICTED: 3'-5' exoribonuclease 1-like [Macaca mulatta]
Length = 340
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 24/189 (12%)
Query: 129 LEFPVLMIDAKTMAFV--DLFHRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDT 181
L F +++ +K V D F ++VRP I + F G+ + D
Sbjct: 141 LAFKIVLNFSKVTQCVLEDTFQQYVRPE----------INTQLSDFCISLTGITQDQVDR 190
Query: 182 ALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPY 241
A F +V+++ W+ L G + + T G+WD+ + QC++S++K PP+
Sbjct: 191 ADTFPQVLKKVIDWMKLKEL------GTKYKYSILTDGSWDMSKFLNIQCQLSRLKYPPF 244
Query: 242 FMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
+WIN++ + NFYK +S+ T + M++ + G H G+DD+KNI R+ RML D
Sbjct: 245 AKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQD 303
Query: 302 GARVQITAR 310
G ++I +
Sbjct: 304 GCELRINEK 312
>gi|166998659|ref|NP_001107798.1| Snipper [Tribolium castaneum]
gi|156447793|gb|ABU63675.1| Snipper [Tribolium castaneum]
Length = 232
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 99 LQVDAAAFQHKCSQDLDFFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLF 147
L+V + + Q D+ LVLD E EI+EFPV++ D K + F
Sbjct: 13 LEVIYSTAKATTPQPFDYLLVLDFEATCWSNGDPRKNPAEIIEFPVVLYDVKNAKIIAEF 72
Query: 148 HRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQH-HL 201
++V P + K F G+ + D +P + + F W+ + L
Sbjct: 73 QQYVMPVE----------NPKLSDFCTELTGIQQHQVDNGVPLQACLLLFSRWVAEKMSL 122
Query: 202 WE----KGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK 257
++ G K AFAT +WDL T + +C I++ + +WI+++ +F +
Sbjct: 123 YDMDFPNGESQATKTCAFATWSDWDLGTCLRKECIRKNIRIEKMYRKWIDIRALFKRYI- 181
Query: 258 PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G+ G + + G+ H G+ D +N R++ +M+ G +Q+T R
Sbjct: 182 --RRPFIGLAGALAELGLTFEGTEHCGLHDARNTARLVGKMVDKGVVLQLTRR 232
>gi|270002199|gb|EEZ98646.1| hypothetical protein TcasGA2_TC001174 [Tribolium castaneum]
Length = 232
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 101/233 (43%), Gaps = 34/233 (14%)
Query: 99 LQVDAAAFQHKCSQDLDFFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLF 147
L+V + + Q D+ LVLD E EI+EFPV++ D K + F
Sbjct: 13 LEVIYSTAKATTPQPFDYLLVLDFEATCWSNGDPRKNPAEIIEFPVVLYDVKNAKIIAEF 72
Query: 148 HRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQH-HL 201
++V P + K F G+ + D +P + + F W+ + L
Sbjct: 73 QQYVMPVE----------NPKLSDFCTELTGIQQHQVDNGVPLQACLLLFSRWVAEKMRL 122
Query: 202 WE----KGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK 257
++ G K AFAT +WDL T + +C I++ + +WI+++ +F +
Sbjct: 123 YDMDFPNGESQAAKTCAFATWSDWDLGTCLRKECIRKNIRIEKMYRKWIDIRALFKRYI- 181
Query: 258 PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ G+ G + + G+ H G+ D +N R++ +M+ G +Q+T R
Sbjct: 182 --RRPFIGLSGALAELGLTFEGTEHCGLHDARNTARLVGKMVDKGVVLQLTRR 232
>gi|26325030|dbj|BAC26269.1| unnamed protein product [Mus musculus]
Length = 688
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 31/218 (14%)
Query: 116 FFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+ +V+D E EI+EFP ++++ T FH +V+P Q
Sbjct: 36 YLIVVDFESTCWNDGKHHSSPEIIEFPAVLLNTATGEIESEFHAYVQP-----QEHPILS 90
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEK-----------GRGGHLKRAA 214
E G+ +V D +P K + QF W+ H L ++ +K A
Sbjct: 91 EFCTELTGIKQVQVDEGVPLKICLSQFCKWI--HKLQQQQTISFAAGDSEPSTSEVKLCA 148
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
F T +WDL + +C+ Q+ P + WI+L+ + FYK RK + G+ G ++
Sbjct: 149 FVTWSDWDLGVCLEYECRRKQLLKPVFLNSWIDLRATYRLFYK-RKPK--GLSGALQEVG 205
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+ G H G+DD++N + +M+ +G ++IT N
Sbjct: 206 IEFSGREHSGLDDSRNTALLAWKMIRNGCLMKITRSLN 243
>gi|242078527|ref|XP_002444032.1| hypothetical protein SORBIDRAFT_07g006140 [Sorghum bicolor]
gi|241940382|gb|EES13527.1| hypothetical protein SORBIDRAFT_07g006140 [Sorghum bicolor]
Length = 283
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 114 LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
DFF+V+D E EI+EFP +++D T + F +VRP +H +
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRP-----RHHPRL 56
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D + E + + WL H G L + A T G+WD +
Sbjct: 57 TDFCRDLTGITQGDVDAGVTLAEALDMHDRWLEAH-------GAKLGKLAVVTWGDWDCR 109
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
T + +C+ I+ P YF +WINL+ F + T + ++ + G H G
Sbjct: 110 TMLDRECRFKGIEKPHYFDDWINLRLPFSAAFGVGNVRFT-LQDAIRKAGLQWEGRLHCG 168
Query: 285 IDDTKNITRVLQRMLADGARVQITARRNP 313
+DD N +L ++ G ++IT P
Sbjct: 169 LDDALNTAHLLVELMRRGTLLKITGSLEP 197
>gi|14714721|gb|AAH10503.1| Exoribonuclease 2 [Homo sapiens]
gi|123996651|gb|ABM85927.1| exonuclease domain containing 1 [synthetic construct]
gi|123996653|gb|ABM85928.1| exonuclease domain containing 1 [synthetic construct]
gi|307684634|dbj|BAJ20357.1| ERI1 exoribonuclease family member 2 [synthetic construct]
Length = 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T F +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPI 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----R 206
+SE + G+ + D +P K + QF W+ IQ ++ G
Sbjct: 89 LSEFCMELT--------GIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPS 140
Query: 207 GGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 141 ASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GL 197
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 198 SGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|356556782|ref|XP_003546701.1| PREDICTED: uncharacterized protein LOC100780340 [Glycine max]
Length = 414
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 30/222 (13%)
Query: 99 LQVDAAAFQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHR 149
+ + A + + Q+ +F+V+D E EI+EFP +++ + T F
Sbjct: 122 INMVAQGYPREQYQEFQYFVVIDFEATCDKDKNPHPQEIIEFPSVIVSSITGQLEACFQT 181
Query: 150 FVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGH 209
+VRP+ Q + + + G + ++ D + E L++H W + +G
Sbjct: 182 YVRPT--CNQLLTDFCKDLTG---IQQIQVDRGVTLSEA-------LLRHDKWLEKKGIK 229
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGM 266
A T NWD + + +C+ +I+ PPYF WINL+ F + + EA +
Sbjct: 230 NSNFAVVTWSNWDCRVMLESECRFKKIRKPPYFNRWINLRIPFREVFGAVRCNLKEAVEI 289
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G+ G H G+DD KN +L ++ G + IT
Sbjct: 290 AGLAWQ------GRAHCGLDDAKNTAHLLALLMHRGFKFSIT 325
>gi|242087831|ref|XP_002439748.1| hypothetical protein SORBIDRAFT_09g019420 [Sorghum bicolor]
gi|241945033|gb|EES18178.1| hypothetical protein SORBIDRAFT_09g019420 [Sorghum bicolor]
Length = 283
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 114 LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
DFF+V+D E EI+EFP +++D T + F +VRP +H +
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFPSVLVDGATGRTLSTFRTYVRP-----RHHPRL 56
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D + E + + WL H G L + A T G+WD +
Sbjct: 57 TDFCRDLTGITQGDVDAGVTLAEALGMHDRWLEAH-------GAKLGKLAVVTWGDWDCR 109
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
T + +C+ I+ P YF +WINL+ F + T + ++ + G H G
Sbjct: 110 TMLEGECRFKGIEKPHYFDDWINLRLPFSAAFGVGNVRFT-LQDAIRKAGLQWEGRLHCG 168
Query: 285 IDDTKNITRVLQRMLADGARVQITARRNP 313
+DD N +L ++ G ++IT P
Sbjct: 169 LDDALNTAHLLVELMRRGTLLKITGSLAP 197
>gi|218505674|ref|NP_542394.2| ERI1 exoribonuclease 2 isoform 2 [Homo sapiens]
gi|119587240|gb|EAW66836.1| similar to RIKEN cDNA 4933424N09 gene, isoform CRA_a [Homo sapiens]
Length = 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T F +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPI 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----R 206
+SE + G+ + D +P K + QF W+ IQ ++ G
Sbjct: 89 LSEFCMELT--------GIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPS 140
Query: 207 GGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 141 ASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GL 197
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 198 SGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|332845434|ref|XP_003315045.1| PREDICTED: ERI1 exoribonuclease 2 isoform 3 [Pan troglodytes]
gi|397481790|ref|XP_003812120.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pan paniscus]
Length = 328
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T F +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPI 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----R 206
+SE + G+ + D +P K + QF W+ IQ ++ G
Sbjct: 89 LSEFCMELT--------GIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPS 140
Query: 207 GGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 141 ASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GL 197
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 198 SGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|395835562|ref|XP_003790746.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Otolemur garnettii]
Length = 657
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 28/208 (13%)
Query: 124 GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
G+ + +EFP ++++ T FH +V+P Q E G+ + D
Sbjct: 26 GRSKSIEFPAVLLNTSTGDIESEFHAYVQP-----QEHPILSEFCMELTGIKQAQVDEGA 80
Query: 184 PFKEVIQQFEAWLIQHHLWEKGR-----------GGHLKRAAFATCGNWDLKTKVPDQCK 232
P K + QF W+ H++ ++ + +K AF T +WDL + +CK
Sbjct: 81 PLKICLSQFCKWI--HNIEQQKKIIFAAGVSEPSTSEIKLCAFVTWSDWDLGVCLEYECK 138
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNIT 292
Q+ P + WI+L+ ++ FY+ RK + G+ G ++ + G H G+DD++N
Sbjct: 139 RKQLLKPVFLNSWIDLRAIYKLFYR-RKPK--GLSGALQEVGIEFSGREHSGLDDSRNTA 195
Query: 293 RVLQRMLADGARVQIT-------ARRNP 313
+ +M+ DG +++IT A++NP
Sbjct: 196 LLAWKMIRDGCQMKITRSLNKVSAKKNP 223
>gi|302767276|ref|XP_002967058.1| hypothetical protein SELMODRAFT_87763 [Selaginella moellendorffii]
gi|300165049|gb|EFJ31657.1| hypothetical protein SELMODRAFT_87763 [Selaginella moellendorffii]
Length = 397
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 107 QHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
Q Q D+F+V+D E EI+EFP +++ +++ D F +V+P+
Sbjct: 102 QKAVEQAFDYFVVIDFEATCDSTVFFPQEIIEFPSVLVAVHSLSVEDSFQTYVKPT---- 157
Query: 159 QHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
N + + G+++ D + E L++H W + +G KR T
Sbjct: 158 --FNPQLTDFCKRLTGIEQTQVDNGMALAEA-------LVKHDKWLEDKGVKSKRFGVIT 208
Query: 218 CGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
+WD K + +C++ + P YF +WINLK F + + + +++ +
Sbjct: 209 WTDWDCKVMLDFECRLKGLTKPSYFNKWINLKSCFQEKF----GDKFNLKKAVQHAGLQW 264
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQIT---ARRNPDSRNVQYLF 322
G H G+DD KN + ++ G ++ T + R P N+ F
Sbjct: 265 QGREHCGLDDAKNTASLAMELVKRGMQIGFTQHQSSRKPAITNISSEF 312
>gi|291390710|ref|XP_002711856.1| PREDICTED: exoribonuclease 2 [Oryctolagus cuniculus]
Length = 689
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q + +V+D E EI+EFP ++++ T FH +V+P Q
Sbjct: 32 QLFQYLIVIDFESTCWNDGKHHHNQEIIEFPAVLLNTSTGEIESEFHTYVQP-----QEH 86
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------GGHL 210
E G+ + D +P K + QF W+ H + ++ + +
Sbjct: 87 PILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWI--HKIQQQKKIVFSTGVSEPSSSEV 144
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMM 270
+ F T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G +
Sbjct: 145 QPCTFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGAL 201
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
+ + G H G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 202 QEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNPNIL 254
>gi|332845432|ref|XP_003315044.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pan troglodytes]
gi|397481788|ref|XP_003812119.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Pan paniscus]
Length = 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T F +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPI 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----R 206
+SE + G+ + D +P K + QF W+ IQ ++ G
Sbjct: 89 LSEFCMELT--------GIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPS 140
Query: 207 GGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 141 ASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GL 197
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 198 SGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|340058722|emb|CCC53082.1| putative phosphotransferase [Trypanosoma vivax Y486]
Length = 525
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 117 FLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEG 167
++VLD E E I+EFP++++D+++ A + F R+V+P ++
Sbjct: 27 YVVLDFEATCERGRRIPDPEIIEFPMVIVDSESGASIAEFQRYVQP----------VLKP 76
Query: 168 KYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ F G+ + + A F V ++ +L H G K F TCG+WD
Sbjct: 77 RLSDFCTELTGITQATVNAAQTFPFVFREALEFLHSHGF---GDEAPYKSFLFVTCGDWD 133
Query: 223 LKTKVPDQCKVS-----QIKLPPYFMEWINLKDVFYNFYKPR--KSEATGMMGMMKNRQV 275
L+T +P Q ++S ++ PP F W N+K + + M+ +
Sbjct: 134 LQTMLPIQLRISAEYGTSLQPPPSFYRWCNIKKLMQRLLPSACASRRIRDIPDMLAVYNL 193
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+ G HH GIDD +NI VL R++ ++ TA P
Sbjct: 194 ELRGRHHSGIDDCRNIATVLNRLVCSRCLIEPTASVQP 231
>gi|34534279|dbj|BAC86956.1| unnamed protein product [Homo sapiens]
Length = 279
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 33/226 (14%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK--- 155
K Q D+ +V+D E EI+EFP ++++ T F +V+P +
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIDSEFQAYVQPQEHPI 88
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----R 206
+SE + G+ + D +P K + QF W+ IQ ++ G
Sbjct: 89 LSEFCMELT--------GIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPS 140
Query: 207 GGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM 266
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 141 ASEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GL 197
Query: 267 MGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 198 SGALQEVGIEFSGREHSGLDDSRNTALLAWKMIRDGCVMKITRSLN 243
>gi|12855883|dbj|BAB30489.1| unnamed protein product [Mus musculus]
Length = 274
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 17/195 (8%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ T FH +V+P Q E G+ +V D +P K
Sbjct: 57 EIIEFPAVLLNTATGEIESEFHAYVQP-----QEHPILSEFCTELTGIKQVQVDEGVPLK 111
Query: 187 EVIQQFEAW---LIQHHLWEKGRG------GHLKRAAFATCGNWDLKTKVPDQCKVSQIK 237
+ QF W L Q G +K AF T +WDL + +C+ Q+
Sbjct: 112 ICLSQFCKWIHKLQQQQTISFAAGDSEPSTSEVKLCAFVTWSDWDLGVCLEYECRRKQLL 171
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P + WI+L+ + FYK RK + G+ G ++ + G H G+DD++N + +
Sbjct: 172 KPVFLNSWIDLRATYRLFYK-RKPK--GLSGALQEVGIEFSGREHSGLDDSRNTALLAWK 228
Query: 298 MLADGARVQITARRN 312
M+ DG ++IT N
Sbjct: 229 MIRDGCLMKITRSLN 243
>gi|391342996|ref|XP_003745801.1| PREDICTED: ERI1 exoribonuclease 3-like [Metaseiulus occidentalis]
Length = 245
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 90/200 (45%), Gaps = 25/200 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q FLV+D E EI+EFPVL + A T V FH +VRP E
Sbjct: 44 KAKQVFSNFLVMDFEATCNRAGPKPFPQEIIEFPVLNLSADTFEEVSRFHTYVRPDVHPE 103
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
++ + G + + + +E ++ FE WL + G + + + T
Sbjct: 104 --LSDFCTELTG---IMQSMVEDQPNLEETLKLFEKWL-------EDNGLNTENSIPVTF 151
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
GNWDL T + QC I +PP +WIN+K + F+ +S G+ ++ +
Sbjct: 152 GNWDLATALKRQCSYLGIDVPPILQQWINIKYPIFYFW---RSWPRGLSHCLEKAGLEFQ 208
Query: 279 GSHHLGIDDTKNITRVLQRM 298
G H GIDD NI ++L+ +
Sbjct: 209 GRAHSGIDDCTNIAQLLKYL 228
>gi|170051987|ref|XP_001862016.1| 3' histone mRNA exonuclease 1 [Culex quinquefasciatus]
gi|167872972|gb|EDS36355.1| 3' histone mRNA exonuclease 1 [Culex quinquefasciatus]
Length = 260
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 27/221 (12%)
Query: 111 SQDLDFFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
+Q + +V+D E EI+EFP ++++ T F +FV P +
Sbjct: 43 TQTFRYLVVMDFEATCWPEQDMKWKTHEIIEFPAVLLNMVTGQVEAQFQQFVMP--VENP 100
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG-------RGGHLKR 212
++++ K D+V + +P K + F WL Q L E+G G
Sbjct: 101 RLSEFCT-KLTGIRQDQV--EGGVPLKTCLPLFGKWLKQV-LGERGLVLPKTDPGNQSGS 156
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKN 272
AFAT +WD + +C +I+ P F +WI+++ ++ FY+ R +
Sbjct: 157 VAFATWSDWDFGKCLSKECTRKRIEKPACFDQWIDVRAIYMKFYQHR---PLNFGEALDK 213
Query: 273 RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
R + G H G+DD+KN+ R++ RM DGA IT P
Sbjct: 214 RGLGFEGRPHSGLDDSKNLARLITRMCKDGANFVITKDLRP 254
>gi|444721415|gb|ELW62152.1| ERI1 exoribonuclease 3 [Tupaia chinensis]
Length = 349
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 26/185 (14%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 161 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 218
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 219 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 270
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 271 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 325
Query: 281 HHLGI 285
H GI
Sbjct: 326 PHSGI 330
>gi|440791054|gb|ELR12308.1| exonuclease [Acanthamoeba castellanii str. Neff]
Length = 277
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 97/220 (44%), Gaps = 37/220 (16%)
Query: 116 FFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
+F+VLDLE EI+EF ++ T D F +V+P + + +
Sbjct: 63 YFVVLDLEATCDEDWNRNFYPQEIIEFSAVLWSTATHEVEDTFQVYVKP--LVHPVLTPF 120
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA---------- 214
+ G+ + W D +E +Q F WL +H L R A+
Sbjct: 121 C---HHLTGIHQEWVDNGASLQECLQMFHEWLERHDLLLAPRPTSTMPASTSITTTSSAF 177
Query: 215 -FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY----KPRKSEATGMMGM 269
AT +WDL T + QC + + PYF +W++LK ++ +Y + + SEA +G+
Sbjct: 178 WLATWSDWDLGTMLEAQCIRTCLDKEPYFNQWVDLKQLYMRYYSKKFRVKLSEAVASLGL 237
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
G+ H +DD +N +R+L +++ G V +T+
Sbjct: 238 GWE------GAEHCALDDCRNTSRLLGKIIEHGHPVYLTS 271
>gi|345802232|ref|XP_851106.2| PREDICTED: ERI1 exoribonuclease 2 [Canis lupus familiaris]
Length = 679
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 104/236 (44%), Gaps = 29/236 (12%)
Query: 107 QHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
+ K Q D+ +V+D E EI+EFP ++++ T FH +V+P
Sbjct: 27 RSKSKQLFDYLIVIDFESTCWNDGKHHQSQEIIEFPAVLLNTSTGEIESEFHAYVQP--- 83
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQF-----EAWLIQHHLWEKG----RG 207
Q E G+ + D +P + + QF + + ++ G
Sbjct: 84 --QEHPVLSEFCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSN 141
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMM 267
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+
Sbjct: 142 SEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK--GLS 198
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
G ++ + G H G+DD++N + +M+ DG ++IT N P +N + L
Sbjct: 199 GALQEVGIEFLGQEHSGLDDSRNTAMLAWKMIRDGCLMKITRSLNKVPTKKNSRIL 254
>gi|294461520|gb|ADE76321.1| unknown [Picea sitchensis]
Length = 436
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 88/208 (42%), Gaps = 28/208 (13%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
QD +F+V+D E EI+EFP ++++ T FH +++P
Sbjct: 139 QDFQYFVVIDFEATCDMGTRLSPQEIIEFPSVLVNGMTGRLEGHFHTYIKPV-------- 190
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQ--QFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
Y D T + +VI L+ H W + RG A T +
Sbjct: 191 ------YHPVLTDFCKELTGIQQSQVIGGVSLSEALLMHDNWLEERGVKNTNFAVVTWSD 244
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGS 280
WD K + +C + I+ P YF WINLK FY+ + + + G ++ + G
Sbjct: 245 WDCKVMLESECNLKGIRKPNYFNRWINLKLPFYDSFGQLRCN---LKGAVEFAGLTWEGR 301
Query: 281 HHLGIDDTKNITRVLQRMLADGARVQIT 308
H G+DD KN R+L ++ G ++ IT
Sbjct: 302 AHSGLDDAKNTARLLLDLMRRGIKLTIT 329
>gi|302755050|ref|XP_002960949.1| hypothetical protein SELMODRAFT_73963 [Selaginella moellendorffii]
gi|300171888|gb|EFJ38488.1| hypothetical protein SELMODRAFT_73963 [Selaginella moellendorffii]
Length = 397
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 107 QHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
Q Q D+F+V+D E EI+EFP +++ +++ D F +V+P+
Sbjct: 102 QKLVEQAFDYFVVIDFEATCDSTVFFPQEIIEFPSVLVAVHSLSVEDSFQTYVKPT---- 157
Query: 159 QHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
N + + G+++ D + E L++H W + +G KR T
Sbjct: 158 --FNPQLTDFCKRLTGIEQTQVDNGMALAEA-------LVKHDKWLEDKGVKSKRFGVIT 208
Query: 218 CGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
+WD K + +C++ + P YF +WINLK F + + + +++ +
Sbjct: 209 WTDWDCKVMLDFECRLKGLTKPSYFNKWINLKSCFQEKF----GDKFNLKKAVQHAGLQW 264
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQIT---ARRNPDSRNVQYLF 322
G H G+DD KN + ++ G ++ T + R P N+ F
Sbjct: 265 QGREHCGLDDAKNTASLAMELVRRGMQIGFTQHQSSRKPAITNISSEF 312
>gi|402854302|ref|XP_003891813.1| PREDICTED: ERI1 exoribonuclease 3 [Papio anubis]
Length = 458
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 26/191 (13%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 238 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 295
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 296 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 347
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGS 280
K +P QC+ + + YF +WINLK Y+F P+ G++ M K + G
Sbjct: 348 KVMLPGQCQYLGLPVADYFKQWINLKKA-YSFAMGCWPKN----GLLDMNKGLSLQHIGR 402
Query: 281 HHLGIDDTKNI 291
H GI + I
Sbjct: 403 PHSGIGQSLRI 413
>gi|405971378|gb|EKC36217.1| Exonuclease domain-containing protein 1, partial [Crassostrea
gigas]
Length = 590
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 26/218 (11%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q + ++LD E EI+EFP ++++ T FH +V P + + ++
Sbjct: 29 QQFSYLIILDYESTCWEQKKFQTQEIIEFPAVLLNTLTGVVESEFHYYVMPEE--QPMLS 86
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG--------RGGHLKRAA 214
+ + G + + D +P + +++F WL + EKG
Sbjct: 87 DFCKQLTG---ITQEQVDNGIPLRLCLRKFSHWLDKLQR-EKGLVFDPPSEDSTEASYTT 142
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
F T +WDL T + ++CK Q+ P WI+L+ + FY + G+ G +++
Sbjct: 143 FVTWSDWDLGTCLLNECKRKQLLKPSQLNNWIDLRATYRKFY---DRKPNGLNGALQDLG 199
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+ G H GI D +N + RM+ DG ++IT N
Sbjct: 200 IEFEGREHSGIVDARNTATLAYRMMCDGCVMKITKSLN 237
>gi|327284033|ref|XP_003226743.1| PREDICTED: ERI1 exoribonuclease 2-like [Anolis carolinensis]
Length = 260
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +++D E EI+EFP ++++ FH +V+P
Sbjct: 30 KLRQLFDYLIIIDFESTCWNDRRKCYSQEIIEFPAVLLNTSDGEIESEFHMYVQP----- 84
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG---RGGHL----- 210
Q E G+ + D +P + QF W IQ EK GH
Sbjct: 85 QEHPLLSEFCTELTGITQSQVDDGVPLHICLSQFSKW-IQKIQKEKNIIFTSGHSSCAAS 143
Query: 211 --KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMG 268
K AF T +WDL + +CK Q++ P WI+L+ + FY RK + G+ G
Sbjct: 144 EGKLCAFVTWSDWDLGVCLHYECKRKQLRKPDILNSWIDLRATYKVFY-SRKPQ--GLKG 200
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+++ + G H G+DD++N + RM+ DG ++IT
Sbjct: 201 ALQDVGIIFAGREHSGLDDSRNTAHLAWRMIRDGCVMKIT 240
>gi|194756028|ref|XP_001960281.1| GF13284 [Drosophila ananassae]
gi|190621579|gb|EDV37103.1| GF13284 [Drosophila ananassae]
Length = 284
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P + ++ Y G + + D +P +
Sbjct: 90 EIIEFPAVLVNLKTGKIEAEFHKYIMP--IESPRLSTYCTELTG---IQQKTVDGGVPLQ 144
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + L AF T +WD + +C +++
Sbjct: 145 TALMMFHEWLRKELRARNLTLPKMNKSNVLGNCAFVTWTDWDFGICLAKECTRKRMRKAA 204
Query: 241 YFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
YF +WI+++ ++ ++YK R S+A +G+ G H GIDD KN+ ++ +
Sbjct: 205 YFNQWIDVRAIYRSWYKYRPCNFSDALSHVGLA------FEGRAHSGIDDAKNLGALMCK 258
Query: 298 MLADGARVQITARRNP 313
M++DGA IT P
Sbjct: 259 MVSDGALFSITKDLTP 274
>gi|281202353|gb|EFA76558.1| putative RNase III [Polysphondylium pallidum PN500]
Length = 164
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 116 FFLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIE 166
+ +VLD E K EI+EFP ++++ +T VD F +V+P H +
Sbjct: 7 YIVVLDFEATCENGTKIAKQEIIEFPSVIVEVETCKIVDTFREYVKPV-----HNPRLSA 61
Query: 167 GKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHH-LWEKGRGGHLKRAAFATCGNWDLKT 225
G+ + W D A F V++ WLI++ L G + F TCG+WDL
Sbjct: 62 FCTELTGIQQAWVDEAQTFSVVMENHRQWLIKNQLLLPSGERSPVNTFTFLTCGDWDLNQ 121
Query: 226 KVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYK 257
+P Q K S K P YF EWIN+K F YK
Sbjct: 122 MLPVQYKFLAGSDGKWPSYFCEWINIKKSFEQHYK 156
>gi|156372383|ref|XP_001629017.1| predicted protein [Nematostella vectensis]
gi|156216008|gb|EDO36954.1| predicted protein [Nematostella vectensis]
Length = 222
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 30/220 (13%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D+ +V+D E EI+EFP +++ T V F +FV P++ S +
Sbjct: 3 QPFDYLVVIDFESTCWKEKRRNSAPEIIEFPAVVVSTSTGEIVSEFRQFVSPTEHS--RL 60
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR---------GGHLKR 212
+++ K D+V D +P + F WL + + R G + +
Sbjct: 61 SEFCT-KLTGITQDQV--DAGIPIGACLVLFSRWLKELQQLKGIRFMSDITRPNGRPIDQ 117
Query: 213 AAFA---TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
A +A T +WD+ + ++C + +PP WI+LK + FY RK + G+ G
Sbjct: 118 AKWAMSVTWSDWDIGICLKNECLRKRHLVPPELRSWIDLKATYKKFYS-RKPD--GLAGA 174
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITA 309
+K+ + G H G+DD +N + RM+ DG + +T+
Sbjct: 175 LKDLGIRFDGREHSGLDDARNTAALAWRMVRDGCVISVTS 214
>gi|410985044|ref|XP_003998835.1| PREDICTED: ERI1 exoribonuclease 2 [Felis catus]
Length = 685
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 29/234 (12%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +V+D E EI+EFP +++ T FH +V+P
Sbjct: 29 KSKQLFDYLIVIDFESTCWNDGKRHQSQEIIEFPAVLLSTSTGEIESEFHTYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQF-----EAWLIQHHLWEKG----RGGH 209
Q E G+ + D +P + + QF + + ++ G
Sbjct: 84 QEHPILSEFCMELTGIKQAQVDEGVPLRICLSQFCKWIQKIQQQKKIIFATGISDLSNSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
++ + G H G+DD++N + +M+ DG ++IT N P +N + L
Sbjct: 201 LQEVGIEFLGREHSGLDDSRNTALLAWKMIRDGCLMKITRSLNKVPTKKNPKIL 254
>gi|195346611|ref|XP_002039851.1| GM15878 [Drosophila sechellia]
gi|194135200|gb|EDW56716.1| GM15878 [Drosophila sechellia]
Length = 281
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P + ++ Y G + + D+ +P +
Sbjct: 87 EIIEFPAVLVNLKTGKIEAEFHQYILP--IESPRLSTYCTELTG---IQQKTVDSGIPLQ 141
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL L + + L AF T +WD + +C I+
Sbjct: 142 TAMVMFHEWLRNEMRARNLTLPKTNKSNILGNCAFVTWTDWDFGICLAKECNRKGIRKAA 201
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ ++ ++YK R T + + + G H GIDD KN+ ++ +M+
Sbjct: 202 YFNQWIDVRAIYRSWYKYRPCNFTDALSHVG---LAFEGRAHSGIDDAKNLGALMCKMMR 258
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 259 DGALFSITKDLTP 271
>gi|449278956|gb|EMC86684.1| Exonuclease domain-containing protein 1, partial [Columba livia]
Length = 186
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 27/194 (13%)
Query: 129 LEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGK--FGVDRVWHDTALPFK 186
+EFP ++++ T FH +V+P K + + K G+ + D A+P
Sbjct: 1 VEFPAVLLNTATGEIEAEFHTYVQPQKHP-------VLSDFCKELTGITQSQVDEAVPLN 53
Query: 187 EVIQQFEAWLIQHHLWEKG----------RGGHLKRAAFATCGNWDLKTKVPDQCKVSQI 236
+ QF W IQ EK K F T +WDL + +CK Q+
Sbjct: 54 ICLSQFWKW-IQKIQREKKIIFSSDIPSHSTSEAKLCTFVTWTDWDLGVCLQYECKRKQL 112
Query: 237 KLPPYFMEWINLKDVFYNFY--KPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRV 294
+ P WI+LK + FY KP+ G+ G +++ + G H G+DD++N R+
Sbjct: 113 RKPDILNSWIDLKATYRTFYNRKPK-----GLSGALQDLGIAFAGREHSGLDDSRNTARL 167
Query: 295 LQRMLADGARVQIT 308
R++ DG +++T
Sbjct: 168 AWRLICDGCVLKVT 181
>gi|302692530|ref|XP_003035944.1| hypothetical protein SCHCODRAFT_50758 [Schizophyllum commune H4-8]
gi|300109640|gb|EFJ01042.1| hypothetical protein SCHCODRAFT_50758 [Schizophyllum commune H4-8]
Length = 369
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 53/240 (22%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMI---------DAKTMAFVDLFHRFVR 152
Q+ D FLV+D+EG EI+EFPV ++ A + VD FH FVR
Sbjct: 113 QNYDAFLVVDVEGTCMQGTTFSYPNEIIEFPVCLMRWRDKADDGTASELEVVDTFHSFVR 172
Query: 153 PS--KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHL 210
P+ + Q G+ + D A PF +V++ F A++I+H L ++ G L
Sbjct: 173 PTWRPVLSQFCTDLT-------GITQSQVDAAPPFADVLRSFYAFMIRHGLIDRRTGKRL 225
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF-----------MEWINLKDVFYNFYK-- 257
+ + + G +DL+ V QC +S+I P + M+W++ + +
Sbjct: 226 VKYCWCSDGPFDLRDFVVKQCFLSRIVFPEWMRGDVLDVRVPVMQWMDEQSSSSDTSSTT 285
Query: 258 ----------PRKSEATGMMGMMKNRQVPMF-GSHHLGIDDTKNITRVLQRMLADGARVQ 306
PR+ + ++ +P F G H GIDDT+NI R+L + G +++
Sbjct: 286 SGSPPSSPMFPRR-RTPNIPAQLRALGLPEFQGRQHSGIDDTRNICRILAELARRGVQLK 344
>gi|401416026|ref|XP_003872508.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488732|emb|CBZ23979.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 879
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 92/196 (46%), Gaps = 26/196 (13%)
Query: 115 DFFLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ LVLD E EI+EFPV+++D + V FHRFVRP E ++ +
Sbjct: 629 DYLLVLDFEATCEEHPPPNYLYEIIEFPVVVVDVRLQRVVAEFHRFVRPRYKRE--LSPF 686
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G D D A +EV++QFE WL H L R F T G DL+
Sbjct: 687 CKKLTGMRQEDV---DAAASLEEVVRQFERWL-SHTLPPH------ARCMFVTDGPMDLR 736
Query: 225 TKVPDQCKVSQ-IKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ Q I+ P F ++I++K F F++ + + M+ ++ +P G H
Sbjct: 737 EFMYYHSVSRQGIRFPSLFYQFIDVKQTFACFFRCSQGKIKAMLEVL---HLPFEGRLHS 793
Query: 284 GIDDTKNITRVLQRML 299
G+DD +NI ++ +L
Sbjct: 794 GLDDARNIASIVIGLL 809
>gi|426254403|ref|XP_004020868.1| PREDICTED: ERI1 exoribonuclease 2 [Ovis aries]
Length = 689
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 106/239 (44%), Gaps = 36/239 (15%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
K Q D+ +++D E EI+EFP ++++ T FH +V+P
Sbjct: 29 KSKQLFDYLIIIDFESTCWNDGKHHRSQEIIEFPAVLLNTSTGEIESEFHAYVQP----- 83
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG---------RGGH 209
Q E G+ + D +P K + QF W+ + +K
Sbjct: 84 QEHPILSEFCMELTGIRQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTISDISTSE 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGM 269
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK + G+ G
Sbjct: 144 VKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK--GLSGA 200
Query: 270 MKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT-------ARRNPD--SRNVQ 319
++ + G H G+DD++N + +M+ DG ++IT +RNP+ +RN+
Sbjct: 201 LQEVGMQFSGREHFGLDDSRNTALLAWKMIRDGCLMKITRSLNKVSTKRNPNIFTRNLN 259
>gi|440906215|gb|ELR56504.1| ERI1 exoribonuclease 2, partial [Bos grunniens mutus]
Length = 682
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 107 QHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK- 155
+ K Q D+ +++D E EI+EFP ++++ T FH +V+P +
Sbjct: 20 RSKSKQLFDYLIIIDFESTCWNDGKRHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEH 79
Query: 156 --MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG-------- 205
+SE + G+ + D +P K + QF W+ + +K
Sbjct: 80 PILSEFCVELT--------GIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSD 131
Query: 206 -RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEAT 264
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK +
Sbjct: 132 ISTSEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK-- 188
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G+ G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 189 GLSGALQEVGMQFLGREHFGLDDSRNTALLAWKMIRDGCLMKITRSLN 236
>gi|329663381|ref|NP_001192506.1| ERI1 exoribonuclease 2 [Bos taurus]
gi|296473339|tpg|DAA15454.1| TPA: ERI1 exoribonuclease family member 2 [Bos taurus]
Length = 689
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 33/228 (14%)
Query: 107 QHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSK- 155
+ K Q D+ +++D E EI+EFP ++++ T FH +V+P +
Sbjct: 27 RSKSKQLFDYLIIIDFESTCWNDGKRHRSQEIIEFPAVLLNTSTGEIESEFHAYVQPQEH 86
Query: 156 --MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG-------- 205
+SE + G+ + D +P K + QF W+ + +K
Sbjct: 87 PILSEFCVELT--------GIKQAQVDEGVPLKICLSQFCKWIQKIQQQKKIIFATTVSD 138
Query: 206 -RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEAT 264
+K AF T +WDL + +CK Q+ P + WI+L+ + FY+ RK +
Sbjct: 139 ISTSEVKLCAFVTWSDWDLGVCLEYECKRKQLLKPVFLNSWIDLRVTYKIFYR-RKPK-- 195
Query: 265 GMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
G+ G ++ + G H G+DD++N + +M+ DG ++IT N
Sbjct: 196 GLSGALQEVGMQFLGREHFGLDDSRNTALLAWKMIRDGCLMKITRSLN 243
>gi|313217587|emb|CBY38652.1| unnamed protein product [Oikopleura dioica]
gi|313232309|emb|CBY09418.1| unnamed protein product [Oikopleura dioica]
Length = 627
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 116 FFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+F+ +D E E I+EFP ++ ++ V FH +VRP + + H++ +
Sbjct: 86 YFVCIDFEATCERNNTFNYPHEIIEFPACLVHIESRKIVGEFHSYVRPFRKA--HLSDFC 143
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKT 225
G+ + D A F +V +QF WL + L ++ G +K + +W L T
Sbjct: 144 ---MELTGITQEKVDQAPYFPQVFKQFVGWLRSYGLLDQTSDGRVKISKHTP--SWTLLT 198
Query: 226 KVP--------DQCKVSQIKLP-PYFMEWINLKDVFYNFYKPRKSEATGMM-GMMKNRQV 275
P QC++ I P + + N+K +F + YKP+ T + M++ +
Sbjct: 199 DSPADICKFLAKQCEMDDIAFPYNWASRYCNIKKIFMSVYKPKYHRFTPKIEDMLEILGM 258
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRN 317
M G H G DD +NI R+ R++ DGA++ P+ N
Sbjct: 259 EMRGDLHSGKDDARNICRIAIRLIKDGAQIWQNEMYKPNKYN 300
>gi|195486290|ref|XP_002091443.1| GE12237 [Drosophila yakuba]
gi|194177544|gb|EDW91155.1| GE12237 [Drosophila yakuba]
Length = 223
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 89/193 (46%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P ++ Y G + + D+ +P +
Sbjct: 29 EIIEFPAVLVNLKTGKIEAEFHKYILP--FESPRLSTYCTELTG---IQQKTVDSGVPLQ 83
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + L AF T +WD + +C +++
Sbjct: 84 TALMMFHEWLRKELRARNLTLPKMNKSNILGNCAFVTWTDWDFGICLAKECTRKRMRKAA 143
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ ++ ++Y+ R T + + + G H GIDD KN+ ++ +M+
Sbjct: 144 YFNQWIDVRAIYRSWYQYRPCNFTDALSHVG---LAFEGRAHSGIDDAKNLGALMCKMVR 200
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 201 DGALFSITKDLTP 213
>gi|194882086|ref|XP_001975144.1| GG22157 [Drosophila erecta]
gi|190658331|gb|EDV55544.1| GG22157 [Drosophila erecta]
Length = 223
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P + ++ Y G + + D+ +P +
Sbjct: 29 EIIEFPAVLVNLKTGKIEAEFHKYILP--IESPRLSTYCTELTG---IQQKTVDSGVPLQ 83
Query: 187 EVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + + AF T +WD + +C +++
Sbjct: 84 TALMMFHEWLRKELRARNLTLPKMNKSNIMGNCAFVTWTDWDFGICLSKECTRKRMRKAA 143
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
YF +WI+++ V+ ++Y+ R T +++ + G H GIDD KN+ ++ +M+
Sbjct: 144 YFNQWIDVRAVYRSWYQYRPCNFT---DALEHVGLAFEGRAHSGIDDAKNLGALMCKMVR 200
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 201 DGALFSITKDLTP 213
>gi|357122926|ref|XP_003563164.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 310
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 92/207 (44%), Gaps = 20/207 (9%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q+ D F+V+D E E I+EFP +++D T F R+VRP +H
Sbjct: 25 QEFDCFVVVDFEAICEKDARIYPQEIIEFPSVLVDGATGRLASAFRRYVRP-----RHHP 79
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ G+ + D + E ++ +AWL + L K +GG R A T G+WD
Sbjct: 80 VLTDFCRELTGIRQEDVDGGVDLAEALRLHDAWLEETMLATK-KGG---RFAVVTWGDWD 135
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
++ + +C+ + P YF WINL+ F + S + ++ + G H
Sbjct: 136 CRSMLDKECRFKGLTKPAYFDRWINLRVPFQAAFG--GSGRVTLQEAVRAAGLEWEGRLH 193
Query: 283 LGIDDTKNITRVLQRMLADGARVQITA 309
G+DD N +L ++ G ++ IT
Sbjct: 194 CGLDDAINTEYLLVEVMQQGVQLAITG 220
>gi|426204660|gb|AFY13248.1| ERI1 exoribonuclease 3-like protein, partial [Schistocerca
gregaria]
Length = 203
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 84 DVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIE----------ILEFPV 133
DV+ N+ R L HK +++++D E E I+EFP
Sbjct: 25 DVLKKRLKNYYKKRKLATINVTSSHKL---YPYYVIVDFEATCEEVNPPDYPHEIIEFPA 81
Query: 134 LMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDTALPFKEV 188
++++++ D F + RP+ ++ KF G+ + D A F EV
Sbjct: 82 VLVNSEKQEIEDCFQSYCRPT----------VKSTLSKFCTELTGITQEQVDKAETFPEV 131
Query: 189 IQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINL 248
+ +FEAWL++H L G + A T G WD+ + QC++S I P + +W N+
Sbjct: 132 LSRFEAWLVEHGL------GTKYKYAIVTDGPWDMGRFLYGQCQLSGIPYPSFGKKWXNI 185
Query: 249 KDVFYNFYKPRK 260
+ F FYK ++
Sbjct: 186 RKTFXXFYKSKR 197
>gi|119627447|gb|EAX07042.1| prion protein interacting protein, isoform CRA_a [Homo sapiens]
Length = 213
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 18/149 (12%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 63 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 120
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 121 FCTELTG---IIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 172
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVF 252
K +P QC+ + + YF +WINLK V
Sbjct: 173 KVMLPGQCQYLGLPVADYFKQWINLKKVL 201
>gi|390594208|gb|EIN03621.1| hypothetical protein PUNSTDRAFT_146951 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 285
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 41/254 (16%)
Query: 86 MHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKI----------EILEFPVLM 135
+H+ HD++ L F+ Q D LV+D+E EI+E+PV +
Sbjct: 11 LHISSPGHDVT--LGKTITEFRGS-KQTYDALLVIDVEATCQAGTDFAWPNEIIEWPVCL 67
Query: 136 ID----------AKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPF 185
+ AK + VD F FV+P+ ++K+ G +++ D+A F
Sbjct: 68 MRWMDKDGPSGVAKDLRIVDEFRAFVKPT--WRPVLSKFCTELTG---IEQADVDSAPTF 122
Query: 186 KEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF-ME 244
EV+ F +L+++ L + L R F++ G WDL+ + QC +S+I +PP+ ++
Sbjct: 123 PEVLASFRGFLVKNGLLDAETDERLCRFCFSSDGPWDLRDFLVKQCFISKIDIPPWIPID 182
Query: 245 WINLKDVFYNFYKP-----------RKSEATGMMGMMKNRQV-PMFGSHHLGIDDTKNIT 292
+++ + V + +++ + ++ ++ + P G H GIDD +N+
Sbjct: 183 FLDTRIVVQGHVRKDFPDGSRVHLNKRARSPSIVAQLRGLGLEPFAGRQHCGIDDARNVA 242
Query: 293 RVLQRMLADGARVQ 306
R+L + GA++Q
Sbjct: 243 RILAELGRRGAKLQ 256
>gi|157116964|ref|XP_001652909.1| exonuclease [Aedes aegypti]
gi|108876231|gb|EAT40456.1| AAEL007801-PA [Aedes aegypti]
Length = 234
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 111 SQDLDFFLVLDLEG------------KIEILEFPVLMIDAKTMAFVDLFHRFVRP---SK 155
+Q + +V+D E K EI+EFP ++++ F +FV P +
Sbjct: 15 TQTFQYLIVIDFEATCWPAEDAQKWKKNEIIEFPAVLLNLSNGQIESEFRQFVMPIENPR 74
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-------GG 208
+S+ I G+ + + +P + F+ WL ++ L ++G
Sbjct: 75 LSDFCIQLT--------GIRQDQVENGVPLHTCLSLFDRWLKKNVLGDRGLILPKMAPSN 126
Query: 209 HLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK--PRK-SEATG 265
AFAT +WDL + + +C +I YF +WI+++ ++ FY+ P+ ++A
Sbjct: 127 PTGTVAFATWTDWDLGSCLTKECTRKKINKAGYFDQWIDVRAIYKTFYQHNPKSFADALT 186
Query: 266 MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+GM G H G+DD+KNI RV+ +M +GA IT P
Sbjct: 187 TLGMR------FEGRPHSGMDDSKNIARVVAKMRREGANFIITKDLRP 228
>gi|256080351|ref|XP_002576445.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350645551|emb|CCD59791.1| 3'-5' exonuclease eri1-related [Schistosoma mansoni]
Length = 232
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 24/210 (11%)
Query: 107 QHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMS 157
Q+ + +L +F +LD E EI+EFPV+++D+ T +D F FV+P++
Sbjct: 22 QNSLTNNLRWFFILDFESTCFEDDIKKPAEIIEFPVVILDSVTGTLIDSFQSFVKPTENP 81
Query: 158 EQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG----GHLKRA 213
E + + G D + A V+++FE WL + ++ G G A
Sbjct: 82 ELSV--FCSNLTGIQQCDV---ENAPTLAVVLRKFEHWLRKA---KENLGCSFKGQPTSA 133
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF---YKPRKSEATGMMGMM 270
F T +WD+ T + D+C+ ++ LP + I+LK +F + +K + G+ +
Sbjct: 134 IFVTWTDWDISTCLWDECRRKKLPLPGDMLNRIDLKAIFQQWLGSHKIGQKWRGGLKDAL 193
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+ G H GIDD +N +R+L +L+
Sbjct: 194 NLIGLHFEGRPHRGIDDARNTSRLLLHLLS 223
>gi|390366041|ref|XP_790825.3| PREDICTED: ERI1 exoribonuclease 2-like [Strongylocentrotus
purpuratus]
Length = 631
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 32/228 (14%)
Query: 103 AAAFQHKCSQD------LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLF 147
A+ HK +Q+ + +V+D E EI+EFP ++++ T F
Sbjct: 18 ASGKSHKSAQNPRTCQTFSYLIVIDFESTCWKDKKNTSQEIIEFPAVLLNTTTGQLESEF 77
Query: 148 HRFVRPSKMSEQH--INKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQ-----HH 200
++V P ++H ++ + G + + + +P + +F +WL + +
Sbjct: 78 QQYVMP----DEHPVLSDFCTELTG---ISQEQVENGVPLFICLNKFTSWLKKIESEKNL 130
Query: 201 LWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK 260
+ + K F T +WDL + +C+ Q+ P WI+ + V+ NFY+ RK
Sbjct: 131 AYNRSTDDTRKLCTFVTWSDWDLSVCLRYECQRKQLYKPSALNHWIDARAVYRNFYQ-RK 189
Query: 261 SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ G+ G ++ + G H G+DD KN ++ RM+ DG +IT
Sbjct: 190 PK--GLSGALQEVGIEFAGRQHSGLDDAKNTAILVWRMIQDGCHFKIT 235
>gi|195431874|ref|XP_002063953.1| GK15944 [Drosophila willistoni]
gi|194160038|gb|EDW74939.1| GK15944 [Drosophila willistoni]
Length = 281
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH+++ P + ++ Y G + + D +P +
Sbjct: 87 EIIEFPAVLVNLKTGKVEAEFHKYIMP--IESPRLSSYCTELTG---IQQKTVDNGIPLQ 141
Query: 187 EVIQQFEAWLIQHH------LWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL + L + + L AF T +WD + +C +++
Sbjct: 142 TALMMFHEWLRKELRARNLVLPKMSKSNILGNCAFVTWTDWDFGICLAKECSRKRMRKAV 201
Query: 241 YFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
YF +WI+++ ++ +YK R S+A +G+ G H GIDD KN+ + +
Sbjct: 202 YFNQWIDVRAIYREWYKYRPCNFSDALAHVGLA------FEGRAHSGIDDAKNLGSLTCK 255
Query: 298 MLADGARVQITARRNP 313
M+ DGA IT P
Sbjct: 256 MVRDGALFAITKDLTP 271
>gi|115438614|ref|NP_001043587.1| Os01g0618000 [Oryza sativa Japonica Group]
gi|54290428|dbj|BAD61298.1| unknown protein [Oryza sativa Japonica Group]
gi|113533118|dbj|BAF05501.1| Os01g0618000 [Oryza sativa Japonica Group]
gi|215693971|dbj|BAG89138.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 20/206 (9%)
Query: 113 DLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ D F+V+D E E I+EFP +++DA T V F +VRP +H +
Sbjct: 26 EFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRP-----RHHPR 80
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G+ + D + E + + + WL + E G R A T G+ D
Sbjct: 81 LTDFCRELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGG-----GRFAVVTWGDADC 135
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+T + +C+ I P YF W++L+ F + + + ++ + G H
Sbjct: 136 RTMLEQECRFKGIAKPAYFDRWVDLRVHFEAAFG-GGGQRVKLQEAVRAAGLEWVGRLHC 194
Query: 284 GIDDTKNITRVLQRMLADGARVQITA 309
G+DD N R+L +L G + IT
Sbjct: 195 GLDDACNTARLLVELLRRGVPISITG 220
>gi|350535268|ref|NP_001232995.1| uncharacterized protein LOC100162389 [Acyrthosiphon pisum]
gi|239793057|dbj|BAH72792.1| ACYPI003543 [Acyrthosiphon pisum]
Length = 248
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 30/216 (13%)
Query: 111 SQDLDFFLVLDLEGKI----------EILEFPVLMIDAKT----MAFVDLFHRFVRPSKM 156
SQ F VLD E EI+EFP +++ V +FH +V+P +
Sbjct: 43 SQPYTKFFVLDFEATCDNGAHLLKPQEIIEFPCILVKFNMAKGGFEVVSIFHSYVKP--I 100
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
+ +Y G V + + PF +V F W H K +++
Sbjct: 101 IHTVLTEYCTQLTG---VTQDMVSNSPPFDDVFFNFCNWHNDHTNMGK------EKSIIV 151
Query: 217 TCGNWDLKTKVPDQCKV--SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
T GNWD+ +QCK+ S IK+P + WIN+K +F G+ M+K
Sbjct: 152 TSGNWDIGNMFIEQCKLFPSTIKIPEFMCTWINIKKLFA---LTMGEYPLGIKSMLKTTN 208
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
FG+ H GIDD NI ++ ++ G Q T +
Sbjct: 209 SKQFGNIHSGIDDCVNIITIMNQLSQRGCVFQATNK 244
>gi|410917872|ref|XP_003972410.1| PREDICTED: ERI1 exoribonuclease 2-like [Takifugu rubripes]
Length = 359
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 97/221 (43%), Gaps = 34/221 (15%)
Query: 111 SQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
+Q +V+D E EI+EFP ++++A T FH +V+P +
Sbjct: 30 NQIFSHLIVIDFESTCWREKNNYSQEIIEFPAVLLNACTGEVESEFHTYVQPQE------ 83
Query: 162 NKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWL--IQHHL---------WEKGRGGH 209
+ + G + G+ ++ + +P + + +F WL +Q ++
Sbjct: 84 HPTLSGFCTELTGITQMQVEAGIPLQICMSRFSRWLQNLQMNMGLVFPNNPQMASAAAAS 143
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY--KPRKSEATGMM 267
F T +WDL + +C+ QI P WI+L+ + FY KP+ G+
Sbjct: 144 RNLCTFLTWSDWDLGVCLQYECRRKQIHKPDVLNSWIDLRGTYRLFYDRKPK-----GLK 198
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G +++ + G H G+DD +N ++ RM+ DG +++T
Sbjct: 199 GALQDLGIQFAGREHSGLDDARNTAQLAARMMRDGCVMKVT 239
>gi|219109276|pdb|3CG7|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
gi|219109277|pdb|3CG7|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
gi|219109290|pdb|3CM5|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
gi|219109291|pdb|3CM5|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Mn
gi|219109292|pdb|3CM6|A Chain A, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
gi|219109293|pdb|3CM6|B Chain B, Crystal Structure Of Cell-Death Related Nuclease 4 (Crn-4)
Bound With Er
Length = 308
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 105 AFQHKCSQDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVD--LFHRFVRP 153
A+QH C D L+LD E E+++F ++ D + F+++V+P
Sbjct: 12 AYQH-CP--FDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKP 68
Query: 154 SKMSEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
+N+ + F G+ + DTA F V +QF+ WLI L E+G+
Sbjct: 69 V------LNRTLTKNCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGL-EEGK------ 115
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGM 269
AF DL Q K+S I++P +F ++INL +F N P++ AT +G
Sbjct: 116 FAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGK 175
Query: 270 MKNR-QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQI 307
M +P G H +DD NI +LQRM+ GA+V +
Sbjct: 176 MNEYYDLPTIGRAHDAMDDCLNIATILQRMINMGAKVTV 214
>gi|17548214|ref|NP_508415.1| Protein CRN-4 [Caenorhabditis elegans]
gi|2496805|sp|Q10905.1|CRN4_CAEEL RecName: Full=Cell death-related nuclease 4; Flags: Precursor
gi|31747257|gb|AAP57300.1| cell death-related nuclease 4 [Caenorhabditis elegans]
gi|351065238|emb|CCD61184.1| Protein CRN-4 [Caenorhabditis elegans]
Length = 298
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 102/219 (46%), Gaps = 32/219 (14%)
Query: 105 AFQHKCSQDLDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVD--LFHRFVRP 153
A+QH C D L+LD E E+++F ++ D + F+++V+P
Sbjct: 2 AYQH-CP--FDTLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKP 58
Query: 154 SKMSEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
+N+ + F G+ + DTA F V +QF+ WLI L E+G+
Sbjct: 59 V------LNRTLTKNCVDFTGIPQRSIDTADTFDVVYEQFQQWLITLGL-EEGK------ 105
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGM 269
AF DL Q K+S I++P +F ++INL +F N P++ AT +G
Sbjct: 106 FAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGK 165
Query: 270 MKNR-QVPMFGSHHLGIDDTKNITRVLQRMLADGARVQI 307
M +P G H +DD NI +LQRM+ GA+V +
Sbjct: 166 MNEYYDLPTIGRAHDAMDDCLNIATILQRMINMGAKVTV 204
>gi|125526866|gb|EAY74980.1| hypothetical protein OsI_02878 [Oryza sativa Indica Group]
Length = 304
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 113 DLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ D F+V+D E E I+EFP +++DA T V F +VRP +H +
Sbjct: 26 EFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRP-----RHHPR 80
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G+ + D + E + + + WL + E G R A T G+ D
Sbjct: 81 LTDFCRELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGG-----GRFAVVTWGDADC 135
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+T + +C+ I P YF W++L+ F + + ++ + G H
Sbjct: 136 RTMLEQECRFKGIAKPAYFDRWVDLRVHFEAAFGGGGRRVK-LQEAVRAAGLEWVGRLHC 194
Query: 284 GIDDTKNITRVLQRMLADGARVQITA 309
G+DD N R+L +L G + IT
Sbjct: 195 GLDDACNTARLLVELLRRGVPISITG 220
>gi|342180404|emb|CCC89881.1| putative exonuclease [Trypanosoma congolense IL3000]
Length = 385
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 98/242 (40%), Gaps = 52/242 (21%)
Query: 107 QHKCS-QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
+ +C+ Q LV D E EI+EFPV+ +D + + V FH +VRP K
Sbjct: 106 KQRCTLQPFSHLLVCDFEATCDDYNVDYPHEIIEFPVVCVDTQQLRVVAEFHSYVRPVKC 165
Query: 157 SE-QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLI------------------ 197
+ K + G + + D A EVI+ F WL
Sbjct: 166 KQLSFFCKELTG------ITQSTVDKAPTLPEVIKLFGEWLRDVVYPMCRQQQHQQSSRP 219
Query: 198 -------QHHLWEKGRGGHL----KRAAFATCGNWDLKTKVPDQCKVSQ--IKLPPYFME 244
+ +++ + AT G WD++ K +C V + PP F
Sbjct: 220 KCSPAAERKFVYDVAHNAEWVDCERMVCLATDGPWDMR-KFMYECGVLRDGYAFPPLFYR 278
Query: 245 WINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGAR 304
W+N++ F ++ R + T M+ ++ P G H GIDD +NI R+L ++ G R
Sbjct: 279 WVNIRRCFACYFHTRPRKLTDMLKVLG---FPFVGQQHSGIDDARNIARILIELMRRGCR 335
Query: 305 VQ 306
++
Sbjct: 336 IK 337
>gi|449547645|gb|EMD38613.1| hypothetical protein CERSUDRAFT_105200 [Ceriporiopsis subvermispora
B]
Length = 296
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 118/246 (47%), Gaps = 46/246 (18%)
Query: 112 QDLDFFLVLDLEGKI-----------EILEFPVLMI---------DAKTMAFVDLFHRFV 151
Q D FLVLD+E EI+E+PV ++ +AK++ VD F FV
Sbjct: 41 QPYDAFLVLDVEATCIEGSPRGEYPNEIIEWPVCLLRWRDKNDNGEAKSLEVVDEFRSFV 100
Query: 152 RPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK 211
RP+ E ++ + + G + + D F +V++ F ++I+H L + G L
Sbjct: 101 RPTWRPE--LSDFCKNLTG---ITQQQVDDTPTFAKVMESFRDFMIRHGLIDVETGKRLT 155
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFY------KPRKSEAT 264
R + G +D++ V QC +S++++P + + ++++ + +++ +PR+++
Sbjct: 156 RFCWCCDGPYDIRDFVVKQCFMSKMQMPTWVQGDMMDVRVLVSDWHASTMQRRPRRNKKN 215
Query: 265 --------GMMGMMKNRQV------PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
M + +RQ+ P G H GIDDT+NITR++ + G ++Q
Sbjct: 216 ISRAFPLPKRMPLTISRQLQVLGLPPFEGRPHSGIDDTRNITRIVIEVGRRGMKLQPNTP 275
Query: 311 RNPDSR 316
NP+ R
Sbjct: 276 INPNRR 281
>gi|301603560|ref|XP_002931486.1| PREDICTED: ERI1 exoribonuclease 3 [Xenopus (Silurana) tropicalis]
Length = 338
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 18/154 (11%)
Query: 104 AAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
AA Q +FLVLD E EI+EFP+L ++ +TM FH +V+P
Sbjct: 117 AAMTSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHTYVQP-- 174
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
+ + + G D V D +V+++ + W+ + L + ++ F
Sbjct: 175 VVHPQLTPFCTELTGIIQ-DMV--DGQPTLSQVLERVDEWMAKEGLLDPSV-----KSIF 226
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLK 249
TCG+WDLK +P QC+ +++ YF +WINLK
Sbjct: 227 VTCGDWDLKLMLPGQCEYLGLQVADYFKQWINLK 260
>gi|242018695|ref|XP_002429809.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
gi|212514827|gb|EEB17071.1| 3' histone mRNA exonuclease, putative [Pediculus humanus corporis]
Length = 237
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 113 DLDFFLVLDLEGKI-------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+ D+ L+LD E EI+EFP L I+ T+ FH++VRP I
Sbjct: 42 NYDYLLILDFEATCDKKKFEQEIIEFPCLKINMNTLREESRFHKYVRPV----------I 91
Query: 166 EGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
K F G+ + D F EV FE W K G + + T G+
Sbjct: 92 NPKLTNFCTELTGIIQEMVDDEPTFNEVYLLFEQW-------RKSEGLTDDNSIYVTSGD 144
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMMKNRQVPM 277
WDL +P QC +S+I++P + M WI++K ++ YN Y ++ + + +
Sbjct: 145 WDLGYMMPRQCAISKIQVPSHMMTWIDIKKLYGINYNCY------CGSLIEIFRVFNIEF 198
Query: 278 FGSHHLGI 285
G +H GI
Sbjct: 199 DGRNHSGI 206
>gi|25148196|ref|NP_741293.1| Protein ERI-1, isoform a [Caenorhabditis elegans]
gi|351064942|emb|CCD73975.1| Protein ERI-1, isoform a [Caenorhabditis elegans]
Length = 448
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 31/238 (13%)
Query: 87 HLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMID 137
+ K N ++R ++ +A K ++ D+ + +D E EI+E P ++ID
Sbjct: 125 YYRKENALLNRKMEPNA----DKTARFFDYLIAIDFECTCVEIIYDYPHEIIELPAVLID 180
Query: 138 AKTMAFVDLFHRFVRP---SKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEA 194
+ M + F +VRP K+SE + ++ K + V D A F+E +Q+
Sbjct: 181 VREMKIISEFRTYVRPVRNPKLSEFCM------QFTKIAQETV--DAAPYFREALQRLYT 232
Query: 195 WLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYN 254
W+ + +L +K R AF T G D+ + QC +S I++P F +IN+K F
Sbjct: 233 WMRKFNLGQKN-----SRFAFVTDGPHDMWKFMQFQCLLSNIRMPHMFRSFINIKKTFKE 287
Query: 255 FYKP--RKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+ + + +G+ M++ + G+ H G+DD NI + +M+ ++I +
Sbjct: 288 KFNGLIKGNGKSGIENMLERLDLSFVGNKHSGLDDATNIAAIAIQMMKLKIELRINQK 345
>gi|195154276|ref|XP_002018048.1| GL16972 [Drosophila persimilis]
gi|198460377|ref|XP_002138824.1| GA25009 [Drosophila pseudoobscura pseudoobscura]
gi|194113844|gb|EDW35887.1| GL16972 [Drosophila persimilis]
gi|198136995|gb|EDY69382.1| GA25009 [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 14/193 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH +V P + ++ Y G + + + +P +
Sbjct: 29 EIIEFPAVLVNLKTGKVEAEFHTYVMP--LESPRLSNYCTELTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHH------LWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+ F WL L + + L AF T +WD + +C +I+ P
Sbjct: 84 TALNLFCEWLRNELRVRNLVLPKTNKSNILGNCAFVTWTDWDFGICLAKECTRKRIRKPA 143
Query: 241 YFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
F +WI+ + ++ +YK R + + + G H GIDD KN+ ++ +M+
Sbjct: 144 CFNQWIDARAIYREWYKYRPC---NFADALSHVDLAFEGRAHSGIDDAKNLGALICKMVR 200
Query: 301 DGARVQITARRNP 313
DGA IT P
Sbjct: 201 DGALFSITKDLTP 213
>gi|194376910|dbj|BAG63016.1| unnamed protein product [Homo sapiens]
Length = 136
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
G+WD+ + QC++S++K PP+ +WIN++ + NFYK +S+ T + M++ +
Sbjct: 18 GSWDMSKFLNIQCQLSRLKYPPFAKKWINIRKSYGNFYKVPRSQ-TKLTIMLEKLGMDYD 76
Query: 279 GSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
G H G+DD+KNI R+ RML DG ++I +
Sbjct: 77 GRPHCGLDDSKNIARIAVRMLQDGCELRINEK 108
>gi|256080349|ref|XP_002576444.1| 3'-5' exonuclease [Schistosoma mansoni]
gi|350645552|emb|CCD59792.1| 3'-5' exonuclease eri1-related [Schistosoma mansoni]
Length = 224
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 22/202 (10%)
Query: 106 FQHKCSQDLDFFLVLDLEGKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
F+ C +D D++ EI+EFPV+++D+ T +D F FV+P++ E + +
Sbjct: 29 FESTCFED-------DIKKPAEIIEFPVVILDSVTGTLIDSFQSFVKPTENPELSV--FC 79
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG----GHLKRAAFATCGNW 221
G D + A V+++FE WL + ++ G G A F T +W
Sbjct: 80 SNLTGIQQCDV---ENAPTLAVVLRKFEHWLRKA---KENLGCSFKGQPTSAIFVTWTDW 133
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF---YKPRKSEATGMMGMMKNRQVPMF 278
D+ T + D+C+ ++ LP + I+LK +F + +K + G+ + +
Sbjct: 134 DISTCLWDECRRKKLPLPGDMLNRIDLKAIFQQWLGSHKIGQKWRGGLKDALNLIGLHFE 193
Query: 279 GSHHLGIDDTKNITRVLQRMLA 300
G H GIDD +N +R+L +L+
Sbjct: 194 GRPHRGIDDARNTSRLLLHLLS 215
>gi|198477156|ref|XP_002136733.1| GA23277 [Drosophila pseudoobscura pseudoobscura]
gi|198145038|gb|EDY71750.1| GA23277 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + + +++Y G + + + +P +
Sbjct: 29 EIIEFPAILVNLKTGMVEAEFHKYVMP--VEKPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFGICLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ K ++ +YK R +++ ++ G H GIDD KN+ ++ +
Sbjct: 141 KPTCFNQWIDAKSIYQKWYKYR---PFSFNNALEHVRLTFQGRAHSGIDDAKNLGSLICK 197
Query: 298 MLADGARVQITARRNP 313
M DGA IT P
Sbjct: 198 MFRDGAPFSITKDLTP 213
>gi|268554023|ref|XP_002634999.1| C. briggsae CBR-ERI-1 protein [Caenorhabditis briggsae]
Length = 578
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
EI+E P ++ID + M + F +VRP K+S+ I ++ K + V D A
Sbjct: 161 EIIELPAVLIDVREMKIISEFRSYVRPVKNPKLSDFCI------QFTKIAQETV--DEAP 212
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
F+E +++ W+ + L EK R AF T G D+ + QC +S I++P F
Sbjct: 213 YFREALEKLMQWMRKFGLGEKN-----TRFAFVTDGPHDMWKFMQFQCILSNIRMPHMFR 267
Query: 244 EWINLKDVFYNFYKP--RKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
+IN+K F + + + +G+ M++ + G+ H G+DD +NI ++ +M+
Sbjct: 268 NFINIKKTFKEKFNGLMKGNGKSGIENMLERLDLTFIGNKHSGLDDARNIAQIAIQMMKL 327
Query: 302 GARVQITAR 310
++I +
Sbjct: 328 KIELRINQK 336
>gi|25148199|ref|NP_741292.1| Protein ERI-1, isoform b [Caenorhabditis elegans]
gi|45476772|sp|O44406.2|ERI1_CAEEL RecName: Full=3'-5' exonuclease eri-1; AltName: Full=Enhanced RNAi
protein
gi|351064943|emb|CCD73976.1| Protein ERI-1, isoform b [Caenorhabditis elegans]
Length = 582
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 109 KCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRP---SKM 156
K ++ D+ + +D E EI+E P ++ID + M + F +VRP K+
Sbjct: 143 KTARFFDYLIAIDFECTCVEIIYDYPHEIIELPAVLIDVREMKIISEFRTYVRPVRNPKL 202
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
SE + ++ K + V D A F+E +Q+ W+ + +L +K R AF
Sbjct: 203 SEFCM------QFTKIAQETV--DAAPYFREALQRLYTWMRKFNLGQKN-----SRFAFV 249
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKP--RKSEATGMMGMMKNRQ 274
T G D+ + QC +S I++P F +IN+K F + + + +G+ M++
Sbjct: 250 TDGPHDMWKFMQFQCLLSNIRMPHMFRSFINIKKTFKEKFNGLIKGNGKSGIENMLERLD 309
Query: 275 VPMFGSHHLGIDDTKNITRVLQRML 299
+ G+ H G+DD NI + +M+
Sbjct: 310 LSFVGNKHSGLDDATNIAAIAIQMM 334
>gi|407832341|gb|EKF98412.1| hypothetical protein TCSYLVIO_010686 [Trypanosoma cruzi]
Length = 379
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 91/215 (42%), Gaps = 46/215 (21%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV+ +D + V FH +VRP+K S + G+ + D A
Sbjct: 114 EIIEFPVVCVDTAELRVVAEFHSYVRPTKNS-----RLTSFCTALTGITQAQVDAAPRLP 168
Query: 187 EVIQQFEAWL--IQHHLWEKGRGGHL-----------------------------KRAAF 215
EV++ F+ WL + + L + R HL +
Sbjct: 169 EVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVYDETHNPGWIDCERMICM 228
Query: 216 ATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLKDVFYNFYK--PRKSEATGMMGMMK 271
T G WD++ K +C V + PP F W+N++ F ++ PRK + M++
Sbjct: 229 VTDGPWDMR-KFMYECSVVRDGHLFPPLFYRWVNVRHSFAEHFRMRPRK-----LNDMLR 282
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
+ G H GIDD++NI R++ +L G RV
Sbjct: 283 KLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVH 317
>gi|198477158|ref|XP_002136734.1| GA23278 [Drosophila pseudoobscura pseudoobscura]
gi|198145039|gb|EDY71751.1| GA23278 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + + +++Y G + + + +P +
Sbjct: 29 EIIEFPAILVNLKTGMVEAEFHKYVMP--VEKPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFGICLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ K ++ +YK R +++ ++ G H GIDD KN+ ++ +
Sbjct: 141 KPTCFNQWIDAKAIYQKWYKYR---PFSFNNALEHVRLTFQGRAHSGIDDAKNLGSLICK 197
Query: 298 MLADGARVQITARRNP 313
M DGA IT P
Sbjct: 198 MFRDGAPFSITKDLTP 213
>gi|198477154|ref|XP_002136732.1| GA23276 [Drosophila pseudoobscura pseudoobscura]
gi|198477160|ref|XP_002136735.1| GA23279 [Drosophila pseudoobscura pseudoobscura]
gi|198145037|gb|EDY71749.1| GA23276 [Drosophila pseudoobscura pseudoobscura]
gi|198145040|gb|EDY71752.1| GA23279 [Drosophila pseudoobscura pseudoobscura]
Length = 223
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + + +++Y G + + + +P +
Sbjct: 29 EIIEFPAILVNLKTGMVEAEFHKYVMP--VEKPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFGICLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ K ++ +YK R +++ ++ G H GIDD KN+ ++ +
Sbjct: 141 KPTCFNQWIDAKAIYQKWYKYR---PFSFNNALEHVRLTFQGRAHSGIDDAKNLGSLICK 197
Query: 298 MLADGARVQITARRNP 313
M DGA IT P
Sbjct: 198 MFRDGAPFSITMDLTP 213
>gi|125571192|gb|EAZ12707.1| hypothetical protein OsJ_02624 [Oryza sativa Japonica Group]
Length = 304
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 20/206 (9%)
Query: 113 DLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ D F+V+D E E I+EFP +++DA T V F +VRP +H +
Sbjct: 26 EFDHFVVVDFEATCERGRRIYPQEIIEFPAVLVDAATGRLVSAFRAYVRP-----RHHPR 80
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G+ + D + E + + + WL + E G R A T G+ D
Sbjct: 81 LTDFCRELTGIAQGDVDAGVGLAEALLRHDEWLRAAGVVEGG-----GRFAVVTWGDADC 135
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+T + +C+ I P YF W++L+ F + + + ++ + G H
Sbjct: 136 RTMLEQECRFKGIAKPAYFDRWVDLRVHFEAAFG-GGGQRVKLQEAVRAAGLEWVGRLHC 194
Query: 284 GIDDTKNITRVLQRMLADGARVQITA 309
G+DD R+L +L G + IT
Sbjct: 195 GLDDACKTARLLVELLRRGVPISITG 220
>gi|403364890|gb|EJY82220.1| Phosphotransferase [Oxytricha trifallax]
Length = 460
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 86/191 (45%), Gaps = 29/191 (15%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV++ID K V F +V+P+ E E G+++ D + K
Sbjct: 255 EIIEFPVVIIDVKAQKVVAEFQTYVKPTLHPE-----LTEFCTKLTGIEQKQVDEGVTIK 309
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRA-AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEW 245
E IQ +L G+ G L+ F +CG++D ++ + +P Y W
Sbjct: 310 EAIQLVHEFL--------GKNGVLESEFVFLSCGDFD-GNQMRREALHKGFDVPNYLKRW 360
Query: 246 INLKDVFYN-------------FYKP-RKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNI 291
IN+K VF F K +KS +GM M++ + + G HH GIDD KNI
Sbjct: 361 INIKKVFPKHLFDEKAAKNEVIFVKDVKKSAVSGMPHMLELCGLELEGRHHSGIDDCKNI 420
Query: 292 TRVLQRMLADG 302
R + L +G
Sbjct: 421 ARCAIKCLQEG 431
>gi|449547643|gb|EMD38611.1| hypothetical protein CERSUDRAFT_113791 [Ceriporiopsis subvermispora
B]
Length = 266
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 108/253 (42%), Gaps = 58/253 (22%)
Query: 111 SQDLDFFLVLDLEGKI----------EILEFPVLMID---------AKTMAFVDLFHRFV 151
Q+ + FLV D+E EI+E+PV ++ A+ + VD F FV
Sbjct: 7 EQEYEAFLVFDVESTCIKGGQFDYPNEIIEWPVCLMRRKDRDGTGRAEMLEIVDEFRSFV 66
Query: 152 RPSK---MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGG 208
+P++ +SE N G+ + D A F E++ +F WL + L + G
Sbjct: 67 KPTRNPQLSEFCTNLT--------GITQEQIDAAPTFTEMLGEFSLWLDRKGLIDSHSGE 118
Query: 209 HLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFYKPRKSEATGMM 267
H R + G+ D+ V QC +S+I LP + +IN++ + Y +Y A+
Sbjct: 119 HRIRFCWCCDGDHDISDFVTKQCFISKIPLPAWIQGRFINVRRMVYGWYAGMLHNASRCR 178
Query: 268 GM----------------------MKNRQVPMF-GSHHLGIDDTKNITRVLQRMLADGAR 304
M ++ Q+P F G H GIDD +NI+R+L + G
Sbjct: 179 DMREGSNAPQLPYSLPEPLTIPRQLETLQLPPFQGRQHSGIDDARNISRILAELSKRGID 238
Query: 305 VQ----ITARRNP 313
++ I ARR P
Sbjct: 239 LEPNAVIRARRWP 251
>gi|342185674|emb|CCC95159.1| putative phosphotransferase [Trypanosoma congolense IL3000]
Length = 582
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 29/209 (13%)
Query: 114 LDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D +++LD E E ++EFP++++DA T + F ++VRP +N
Sbjct: 75 FDVYVILDFEATCERGKRICVPEVIEFPMILLDALTGRTIAEFQQYVRPV------VNPR 128
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + G+ + D A F V +L Q+ G KR F T G+WDL
Sbjct: 129 LSDFCTELVGIRQETVDKADTFPSVFSSAMNFLQQNGC---GDTPSSKRHLFITFGDWDL 185
Query: 224 KTKVPDQCKVS-----QIKLPPYFMEWINLKDV-----FYNFYKPRKSEATGMMGMMKNR 273
KT +P Q + I +PP+ W N+K + F ++ + MM
Sbjct: 186 KTMLPLQLQACCDQGVSICVPPFLRRWCNIKRLMQQMLFQGVWQAGLRFIRDIPDMMNIL 245
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ M G HH GIDD +NI + +++ G
Sbjct: 246 SLEMQGRHHSGIDDCRNIAAAVAKLIQAG 274
>gi|195162333|ref|XP_002022010.1| GL14415 [Drosophila persimilis]
gi|194103908|gb|EDW25951.1| GL14415 [Drosophila persimilis]
Length = 223
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 87/199 (43%), Gaps = 20/199 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + +++Y G + + + +P +
Sbjct: 29 EIIEFPAILVNLKTGMVEAEFHKYVMP--VESPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD +T + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFETCLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ K ++ +YK + ++ + G H GIDD KN+ ++ +
Sbjct: 141 KPTCFNQWIDAKAIYKKWYKYHPFNFGKALAHVR---LTFQGRAHSGIDDAKNLGNLICK 197
Query: 298 MLADGARVQITARRNPDSR 316
M +GA + IT P
Sbjct: 198 MFREGAPLSITKDLTPQEE 216
>gi|71407241|ref|XP_806103.1| exonuclease [Trypanosoma cruzi strain CL Brener]
gi|70869745|gb|EAN84252.1| exonuclease, putative [Trypanosoma cruzi]
Length = 289
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 91/216 (42%), Gaps = 46/216 (21%)
Query: 126 IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPF 185
+EI+EFPV+ +D + V FH +VRP+K + G+ + D A
Sbjct: 23 LEIIEFPVVCVDTAELRVVAEFHSYVRPTKNP-----RLTSFCTALTGITQAQVDAAPRL 77
Query: 186 KEVIQQFEAWL--IQHHLWEKGRGGHL-----------------------------KRAA 214
EV++ F+ WL + + L + R HL +
Sbjct: 78 PEVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVYDETHNPGWIDCERMIC 137
Query: 215 FATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLKDVFYNFYK--PRKSEATGMMGMM 270
T G WD++ K +C V + PP F W+N++ F ++ PRK + M+
Sbjct: 138 MVTDGPWDMR-KFMYECSVVRDGHLFPPLFYRWVNVRHSFAEHFRMRPRK-----LNDML 191
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
+ + G H GIDD++NI R++ +L G RV
Sbjct: 192 RKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVH 227
>gi|326499798|dbj|BAJ90734.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP +++D T F R+VRP +H + G+ + D +
Sbjct: 38 EIIEFPAVLVDGATGCIESAFRRYVRP-----KHHPVLTQFCRELTGIRQEDLDGGVDLG 92
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
E + +AWL R R A T G+WD +T + +C+ I+ P YF +WI
Sbjct: 93 EALWLHDAWLKAATAGAGNR--RSGRLAVVTWGDWDCRTMLEFECRFKGIEKPSYFDQWI 150
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
NL+ F + ++ + G H G+DD N R+L ++ G ++
Sbjct: 151 NLRVPFQVALG--GGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRRGVKMT 208
Query: 307 ITARRNP 313
IT P
Sbjct: 209 ITGSLAP 215
>gi|395333281|gb|EJF65658.1| hypothetical protein DICSQDRAFT_49122 [Dichomitus squalens LYAD-421
SS1]
Length = 258
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 43/245 (17%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMI---DA------KTMAFVDLFHR 149
+ Q D FLVLD+E EI+E+PV ++ DA + + V F
Sbjct: 4 RLKQVYDAFLVLDVEATCVEGSDFAYPNEIIEWPVCLLRWKDANVKGKTRELEIVAEFRS 63
Query: 150 FVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGH 209
FVRP+ + ++++ + G + + D+A F EV+Q F +L +H L ++ G
Sbjct: 64 FVRPTWRPQ--LSEFCQALTG---ITQEQVDSASTFPEVLQDFRKFLEEHELLDEA-GHR 117
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFYKPRKSEA----- 263
L R F + G +D++ V QC +S+I +P + + ++++ V ++ + A
Sbjct: 118 LARFCFCSDGPYDIRDFVVKQCFISKIPVPAWLSGDVMDVRRVVGEWHDANTAAAVERRQ 177
Query: 264 TGMMGMMKN------RQV------PMFGSHHLGIDDTKNITRVLQRMLADGARVQITARR 311
G + + RQ+ P G H GIDDT+NI R++ + G R++
Sbjct: 178 VGAFPLPRRMTFPIPRQLHALGLEPFVGRQHSGIDDTRNICRLVIELARRGWRLEPNTAI 237
Query: 312 NPDSR 316
NP+ R
Sbjct: 238 NPNRR 242
>gi|326504778|dbj|BAK06680.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP +++D T F R+VRP +H + G+ + D +
Sbjct: 38 EIIEFPAVLVDGATGCIESAFRRYVRP-----KHHPVLTQFCRELTGIRQEDVDGGVDLG 92
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
E + +AWL R R A T G+WD +T + +C+ I+ P YF +WI
Sbjct: 93 EALWLHDAWLKAATAGAGNR--RSGRLAVVTWGDWDCRTMLEFECRFKGIEKPSYFDQWI 150
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
NL+ F + ++ + G H G+DD N R+L ++ G ++
Sbjct: 151 NLRVPFQVALG--GGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRRGVKMT 208
Query: 307 ITARRNP 313
IT P
Sbjct: 209 ITGSLAP 215
>gi|194771098|ref|XP_001967613.1| GF13954 [Drosophila ananassae]
gi|190622727|gb|EDV38251.1| GF13954 [Drosophila ananassae]
Length = 282
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 26/199 (13%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY---IEGKYGKFGVDRVWHDTAL 183
EI+E P ++++ KT FH+++ P + ++ Y + G K G D +
Sbjct: 88 EIIECPAVLVNLKTGKIEAEFHKYIMP--IESPRLSTYCTELTGFQQKTG------DGEV 139
Query: 184 PFKEVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIK 237
P + + F WL + L + + L AF T +WD + +C +++
Sbjct: 140 PLQTALMMFHEWLRKELRARNLTLPKMNKSDVLGNCAFVTWTDWDFGICLAKECTRKRMR 199
Query: 238 LPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRV 294
YF +WI+++ + ++YK R S+A +G+ G H GIDD KN+ +
Sbjct: 200 KASYFNQWIDVRAINRSWYKYRPCNFSDALSHVGLA------FEGRAHWGIDDAKNLGAL 253
Query: 295 LQRMLADGARVQITARRNP 313
+ +M+ DGA IT P
Sbjct: 254 MCKMVIDGALFSITKDLTP 272
>gi|326529429|dbj|BAK04661.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 345
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP +++D T F R+VRP +H + G+ + D +
Sbjct: 38 EIIEFPAVLVDGATGRIESAFRRYVRP-----KHHPVLTQFCRELTGIRQEDVDGGVDLG 92
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
E + +AWL R R A T G+WD +T + +C+ I+ P YF +WI
Sbjct: 93 EALWLHDAWLKAATAGAGNR--RSGRLAVVTWGDWDCRTMLEFECRFKGIEKPSYFDQWI 150
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
NL+ F + ++ + G H G+DD N R+L ++ G ++
Sbjct: 151 NLRVPFQVALG--GGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRRGVKMT 208
Query: 307 ITARRNP 313
IT P
Sbjct: 209 ITGSLAP 215
>gi|71417701|ref|XP_810631.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875192|gb|EAN88780.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 379
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 90/215 (41%), Gaps = 46/215 (21%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV+ +D + V FH +VRP+K + G+ + D A
Sbjct: 114 EIIEFPVVCVDTAELRVVAEFHSYVRPTKNP-----RLTSFCTALTGITQAQVDAAPRLP 168
Query: 187 EVIQQFEAWL--IQHHLWEKGRGGHL-----------------------------KRAAF 215
EV++ F+ WL + + L + R HL +
Sbjct: 169 EVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVYDETHNPGWIDCERMICM 228
Query: 216 ATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLKDVFYNFYK--PRKSEATGMMGMMK 271
T G WD++ K +C V + PP F W+N++ F ++ PRK + M++
Sbjct: 229 VTDGPWDMR-KFMYECSVVRDGHLFPPLFYRWVNVRHSFAEHFRMRPRK-----LNDMLR 282
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
+ G H GIDD++NI R++ +L G RV
Sbjct: 283 KLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVH 317
>gi|395835560|ref|XP_003790745.1| PREDICTED: ERI1 exoribonuclease 2 isoform 1 [Otolemur garnettii]
Length = 592
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 23/159 (14%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGR-----------GGHLKRAAFATCGNW 221
G+ + D P K + QF W+ H++ ++ + +K AF T +W
Sbjct: 5 GIKQAQVDEGAPLKICLSQFCKWI--HNIEQQKKIIFAAGVSEPSTSEIKLCAFVTWSDW 62
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
DL + +CK Q+ P + WI+L+ ++ FY+ RK + G+ G ++ + G
Sbjct: 63 DLGVCLEYECKRKQLLKPVFLNSWIDLRAIYKLFYR-RKPK--GLSGALQEVGIEFSGRE 119
Query: 282 HLGIDDTKNITRVLQRMLADGARVQIT-------ARRNP 313
H G+DD++N + +M+ DG +++IT A++NP
Sbjct: 120 HSGLDDSRNTALLAWKMIRDGCQMKITRSLNKVSAKKNP 158
>gi|426200471|gb|EKV50395.1| hypothetical protein AGABI2DRAFT_190719 [Agaricus bisporus var.
bisporus H97]
Length = 416
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 40/237 (16%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMID------AKTMAFVDLFHRFVRPSK 155
Q D FLVLD+E EI+EFPV ++ + VD F VRPS
Sbjct: 25 QPYDAFLVLDVEATCLQGTDFNYPNEIIEFPVCLMKWQDKGRTNNLQIVDEFRSLVRPSW 84
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
++ + G + + D A F +V++ A+L+++ L + G L R +
Sbjct: 85 --RPTLSAFCTELTG---ITQTQVDAASLFPDVLKSVRAFLVKNGLIDGATGKRLLRFCW 139
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYF-----------MEWINLKDVFYNFYKPRKS--- 261
+ G +D++ V QC +S+I +P + M+W++ + + + P
Sbjct: 140 CSDGPFDIRDFVVKQCFISRIPMPDWLAGDVLDVRMTVMQWLSSQPLLGDTESPTPQARF 199
Query: 262 ----EATGMMGMMKNRQVPMF-GSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+ + +K +P F G H GIDD +NI R++ + G ++ + P
Sbjct: 200 PPIRRSLNISAQLKALGLPSFQGRQHSGIDDARNIARIVTELAKRGVALRPNTQIKP 256
>gi|409082606|gb|EKM82964.1| hypothetical protein AGABI1DRAFT_82658 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 416
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 40/237 (16%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMID------AKTMAFVDLFHRFVRPSK 155
Q D FLVLD+E EI+EFPV ++ + VD F VRPS
Sbjct: 25 QPYDAFLVLDVEATCLQGTDFNYPNEIIEFPVCLMKWQDKGRTNNLQIVDEFRSLVRPSW 84
Query: 156 MSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAF 215
++ + G + + D A F +V++ A+L+++ L + G L R +
Sbjct: 85 --RPTLSAFCTELTG---ITQTQVDAASLFPDVLKSVRAFLVKNGLIDGATGKRLLRFCW 139
Query: 216 ATCGNWDLKTKVPDQCKVSQIKLPPYF-----------MEWINLKDVFYNFYKPRKS--- 261
+ G +D++ V QC +S+I +P + M+W++ + + + P
Sbjct: 140 CSDGPFDIRDFVVKQCFISRIPMPDWLAGDVLDVRMTVMQWLSSQPLLGDTESPTPQARF 199
Query: 262 ----EATGMMGMMKNRQVPMF-GSHHLGIDDTKNITRVLQRMLADGARVQITARRNP 313
+ + +K +P F G H GIDD +NI R++ + G ++ + P
Sbjct: 200 PPVRRSLNISAQLKALGLPSFQGRQHSGIDDARNIARIVTELAKRGVALRPNTQIKP 256
>gi|407410790|gb|EKF33102.1| hypothetical protein MOQ_003039 [Trypanosoma cruzi marinkellei]
Length = 372
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 96/239 (40%), Gaps = 55/239 (23%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHIN 162
Q LV D E EI+EFPV+ +D + V FH +VRP+K
Sbjct: 90 QIFSHLLVCDFEATCDSASVAYPHEIIEFPVVCVDTAELRVVAEFHSYVRPTKNP----- 144
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHHLWEKGRGGH-------LKRA 213
+ G+ + D A EV++ F+ WL + + L + R H LK +
Sbjct: 145 RLTSFCTALTGITQAQVDAAPRLPEVLRHFDRWLREVVYPLCRRWRKEHPEGLNKCLKAS 204
Query: 214 ----------------------AFATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLK 249
T G WD++ K +C V + PP F W+N++
Sbjct: 205 QKRRLVCDETHNPGWVDCERMICMVTDGPWDMR-KFMYECSVVRDGHFFPPIFYRWVNVR 263
Query: 250 DVFYNFYK--PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
F ++ PRK + M+K + G H GIDD++NI R++ +L G RV
Sbjct: 264 HSFAEHFRMRPRK-----LTDMLKKLGLSFHGHPHSGIDDSRNIARIVIELLKRGYRVH 317
>gi|326508370|dbj|BAJ99452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 9/187 (4%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP +++D T F R+VRP +H + G+ + D +
Sbjct: 38 EIIEFPAVLVDGATGRIESAFRRYVRP-----KHHPVLTQFCRELTGIRQEDVDGGVDLG 92
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWI 246
E + +AWL R R A T G+WD +T + +C+ I+ P YF +WI
Sbjct: 93 EALWLHDAWLKAATAGAGNR--RSGRLAVVTWGDWDCRTMLEFECRFKGIEKPSYFDQWI 150
Query: 247 NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
NL+ F + ++ + G H G+DD N R+L ++ G ++
Sbjct: 151 NLRVPFQVALG--GGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRRGVKMT 208
Query: 307 ITARRNP 313
IT P
Sbjct: 209 ITGSLVP 215
>gi|301781889|ref|XP_002926359.1| PREDICTED: ERI1 exoribonuclease 3-like isoform 2 [Ailuropoda
melanoleuca]
Length = 160
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC+
Sbjct: 28 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCQ 82
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTK 289
+ + YF +WINLK Y+F P+ G++ M K + G H GIDD K
Sbjct: 83 YLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGRPHSGIDDCK 137
Query: 290 NITRVLQRMLADGARVQITAR 310
NI +++ + G + T++
Sbjct: 138 NIANIMKTLAYQGFIFKQTSK 158
>gi|335775859|gb|AEH58712.1| 3'-5' exoribonuclease 1-like protein, partial [Equus caballus]
Length = 218
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 27/155 (17%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHI 161
D+ ++D E E I+EFPV++++ T+ D F ++VRP +++S+ I
Sbjct: 78 DYICIIDFEATCEEGNPPEFIHEIIEFPVVLLNTHTLEIEDTFQQYVRPEINTQLSDFCI 137
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
N G+ + D A F +V+++ W+ L G + + T G+W
Sbjct: 138 NLT--------GITQDLVDGADTFPQVLRKVVDWMKLKEL------GTKYKYSILTDGSW 183
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFY 256
D+ + QC++S++K PP+ +WIN++ + NFY
Sbjct: 184 DMSKFLNIQCRLSRLKYPPFAKKWINIRKSYGNFY 218
>gi|428184491|gb|EKX53346.1| hypothetical protein GUITHDRAFT_101048 [Guillardia theta CCMP2712]
Length = 638
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
D+A FKEV+ WL + L E FAT G+WDL++ +P QC+++++ P
Sbjct: 304 DSAPEFKEVLANMLDWLAELGLPEGS-------VMFATDGDWDLRSMLPRQCELAEVPQP 356
Query: 240 PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRV 294
W++++ VF K+ G+M M + + G H GI D +NI RV
Sbjct: 357 VALQRWVDIRRVFSETL---KTGNKGLMSMCQALGINFVGQAHSGICDARNIARV 408
>gi|426215378|ref|XP_004001949.1| PREDICTED: ERI1 exoribonuclease 3 isoform 1 [Ovis aries]
gi|119627450|gb|EAX07045.1| prion protein interacting protein, isoform CRA_d [Homo sapiens]
gi|194375784|dbj|BAG57236.1| unnamed protein product [Homo sapiens]
gi|296488925|tpg|DAA31038.1| TPA: ERI1 exoribonuclease 3 isoform 2 [Bos taurus]
Length = 160
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC+
Sbjct: 28 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCQ 82
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTK 289
+ + YF +WINLK Y+F P+ G++ M K + G H GIDD K
Sbjct: 83 YLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGRPHSGIDDCK 137
Query: 290 NITRVLQRMLADGARVQITAR 310
NI +++ + G + T++
Sbjct: 138 NIANIMKTLAYRGFIFKQTSK 158
>gi|158258625|dbj|BAF85283.1| unnamed protein product [Homo sapiens]
Length = 598
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 14/160 (8%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RGGHLKRAAFATCGNWDL 223
G+ + D +P K + QF W+ IQ ++ G +K AF T +WDL
Sbjct: 5 GIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGISEPSASEVKLCAFVTWSDWDL 64
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ +CK Q+ P + WI+L+ + FY+ RK + G+ G ++ + G H
Sbjct: 65 GVCLEYECKRKQLLKPVFLNSWIDLRATYKLFYR-RKPK--GLSGALQEVGIEFSGREHS 121
Query: 284 GIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
G+DD++N + +M+ DG ++IT N P +N L
Sbjct: 122 GLDDSRNTALLAWKMIRDGCVMKITRSLNKVPTKKNFSIL 161
>gi|312090123|ref|XP_003146498.1| exonuclease [Loa loa]
gi|393907516|gb|EJD74680.1| exonuclease, variant [Loa loa]
Length = 192
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 112 QDLDFFLVLDLEG------KI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q+ D+FLVLD E KI EI+EFPV+ + K + + FHR+V+P +E+ I
Sbjct: 57 QNFDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEISRFHRYVKP---TERPI 113
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA--AFATCG 219
+ + V +LP EV+ F+ WLI +L H ++ F TCG
Sbjct: 114 LTSFCTELTGIVQETVASQESLP--EVLDAFDKWLINSNLI---NADHSMKSHFTFITCG 168
Query: 220 NWDLKTKVPDQCKVSQIKLP 239
+WDL +P + +KLP
Sbjct: 169 DWDLGVLLPSEANYRNLKLP 188
>gi|114053091|ref|NP_001039944.1| ERI1 exoribonuclease 3 isoform 2 [Bos taurus]
gi|82571565|gb|AAI10160.1| Exoribonuclease 3 [Bos taurus]
Length = 160
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC+
Sbjct: 28 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCQ 82
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNIT 292
+ + YF +WINLK + + G++ M K + G H GIDD KNI
Sbjct: 83 YLGLPVADYFKQWINLKKAYS--FAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIA 140
Query: 293 RVLQRM 298
+++ +
Sbjct: 141 NIMKTL 146
>gi|326487924|dbj|BAJ89801.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 19/192 (9%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPS--KMSEQHINKYIEGKYGKFGVDRVWHDTALP 184
EI+EFP +++D T F R+VRP + Q + G+ + D +
Sbjct: 34 EIIEFPAVLVDGATGRMESAFRRYVRPKHHPLLTQFCRELT-------GIRQEDVDGGVD 86
Query: 185 FKEVIQQFEAWLIQHHLWEKGRGGHLKRA---AFATCGNWDLKTKVPDQCKVSQIKLPPY 241
E + WL L E G KR+ A T G+WD +T + +C+ I+ P Y
Sbjct: 87 LGEAL-----WLHDDWLKEATAGAGNKRSVRLAVVTWGDWDCRTMLEFECRFKGIEKPSY 141
Query: 242 FMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
F +WINL+ F + + ++ + G H G+DD R+L ++
Sbjct: 142 FDQWINLRVPFQAAFG--GGGRVNLQEAVRAAGLDWEGRLHCGLDDALKTARLLVAIMRR 199
Query: 302 GARVQITARRNP 313
G ++ IT P
Sbjct: 200 GVKITITGSLAP 211
>gi|341884091|gb|EGT40026.1| hypothetical protein CAEBREN_30328 [Caenorhabditis brenneri]
Length = 442
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 88/179 (49%), Gaps = 18/179 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSK---MSEQHINKYIEGKYGKFGVDRVWHDTAL 183
EI+E P ++ID + + F +VRP + +S+ ++ + K + V D A
Sbjct: 175 EIIELPAVLIDVRDKRIISEFRTYVRPVRNPVLSDFCVD------FTKIAQETV--DEAP 226
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
F+E +++ W+ + L EK R AF T G D+ + QC +S I++P F
Sbjct: 227 YFREALEKLYQWMRKFGLGEKK-----TRFAFVTDGPHDMWKFMQFQCLLSNIRMPHMFR 281
Query: 244 EWINLKDVF-YNFYKPRKSEA-TGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+IN+K + NF K +G+ M+ + G+ H G+DD KNI +++ +++
Sbjct: 282 NFINIKKTYKENFNGLVKGNGKSGIENMLDGLGLSFIGNKHSGLDDAKNIAQIVIHLMS 340
>gi|148698604|gb|EDL30551.1| prion protein interacting protein 1, isoform CRA_b [Mus musculus]
gi|149035533|gb|EDL90214.1| similar to prion protein interacting protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 160
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC
Sbjct: 28 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCH 82
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYK---PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTK 289
+ + YF +WINLK Y+F P+ G++ M K + G H GIDD K
Sbjct: 83 YLGLPVADYFKQWINLKKA-YSFAMGCWPK----NGLLDMNKGLSLQHIGRPHSGIDDCK 137
Query: 290 NITRVLQRMLADGARVQITAR 310
NI +++ + G + T++
Sbjct: 138 NIANIMKTLAYRGFIFKQTSK 158
>gi|336367654|gb|EGN95998.1| hypothetical protein SERLA73DRAFT_185475 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380368|gb|EGO21521.1| hypothetical protein SERLADRAFT_473977 [Serpula lacrymans var.
lacrymans S7.9]
Length = 380
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 46/253 (18%)
Query: 103 AAAFQHKCSQDLDFFLVLDLEGKI----------EILEFPVLMID---------AKTMAF 143
AA + Q D FLVLD+E EI+E+PV ++ A +
Sbjct: 119 AAIEDTRAKQPYDAFLVLDVEATCLQGAGFEWPNEIIEWPVCLMKWKDKSSKGKASQLVV 178
Query: 144 VDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWE 203
VD F FV+P+ ++++ G + + ++A F +V++ F +L Q+ L +
Sbjct: 179 VDEFRSFVKPTW--RPQLSQFCTELTG---ITQTQVNSAPTFPKVLKSFARFLSQNGLID 233
Query: 204 KGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNF------- 255
G L R + + G +D++ V QC +S+I +P + + ++++ V +
Sbjct: 234 PKNGRPLLRFCWCSDGPFDIRDFVVKQCFLSKIPMPVWLRGDVLDVRKVVSAWSASQTMQ 293
Query: 256 --YKPRKSEATGMMGMMKNRQVPM----------FGSHHLGIDDTKNITRVLQRMLADGA 303
Y+ + A+G +++ +P+ G H GIDDT+NI R++ +
Sbjct: 294 ENYEAKTRSASG--SRLRSLNIPLQLRALGLSAFEGRQHSGIDDTRNIARIITELARRSI 351
Query: 304 RVQITARRNPDSR 316
R++ NP+ R
Sbjct: 352 RLEPNTPINPNRR 364
>gi|12654485|gb|AAH01072.1| ERI3 protein [Homo sapiens]
gi|13325281|gb|AAH04456.1| ERI3 protein [Homo sapiens]
Length = 128
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 185 FKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME 244
++V+++ + W+ + L + ++ F TCG+WDLK +P QC+ + + YF +
Sbjct: 8 LQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCQYLGLPVADYFKQ 62
Query: 245 WINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGAR 304
WINLK + + G++ M K + G H GIDD KNI +++ + G
Sbjct: 63 WINLKKAYS--FAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIANIMKTLAYRGFI 120
Query: 305 VQITAR 310
+ T++
Sbjct: 121 FKQTSK 126
>gi|51260906|gb|AAH79640.1| Eri3 protein [Mus musculus]
Length = 135
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC
Sbjct: 3 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCH 57
Query: 233 VSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNIT 292
+ + YF +WINLK + + G++ M K + G H GIDD KNI
Sbjct: 58 YLGLPVADYFKQWINLKKAYS--FAMGCWPKNGLLDMNKGLSLQHIGRPHSGIDDCKNIA 115
Query: 293 RVLQRMLADGARVQITAR 310
+++ + G + T++
Sbjct: 116 NIMKTLAYRGFIFKQTSK 133
>gi|308456231|ref|XP_003090574.1| CRE-ERI-1 protein [Caenorhabditis remanei]
gi|308262483|gb|EFP06436.1| CRE-ERI-1 protein [Caenorhabditis remanei]
Length = 584
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 22/199 (11%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSEQHINKYIEGKYGKFGVDRVWH---- 179
EI+E P ++ID + M V F +VRP K+SE I ++ V +
Sbjct: 165 EIIELPAVLIDVREMKIVSEFRSYVRPVKNPKLSEFCIQ--FTSRWPPLLVPSLIDFLPE 222
Query: 180 ------DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKV 233
D A F+E + + W+ L EK R AF T G D+ + QC +
Sbjct: 223 IAQETVDEAPYFREALDRLIQWMRHFGLGEKN-----TRFAFVTDGPHDMWKFMQFQCLL 277
Query: 234 SQIKLPPYFMEWINLKDVFYNFYKP--RKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNI 291
S I++P F +IN+K F + + + +G+ M++ ++ G+ H G+DD +NI
Sbjct: 278 SNIRMPHMFRNFINIKKTFKEKFNGLVKGNGKSGIENMLERLELSFIGNKHSGLDDARNI 337
Query: 292 TRVLQRMLADGARVQITAR 310
++ +M+ ++I +
Sbjct: 338 AQIAIQMMKLKIELRINQK 356
>gi|328773880|gb|EGF83917.1| hypothetical protein BATDEDRAFT_33990 [Batrachochytrium
dendrobatidis JAM81]
Length = 267
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 42/201 (20%)
Query: 116 FFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+LV D+E E++EFPV+ ID TM V F R+ RP + + +
Sbjct: 80 IYLVCDIEATCDSDSGFDFASEVIEFPVIAIDGTTMETVSTFRRYCRP--ILHPTLTDFC 137
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKT 225
+ G + + D A PF V F W++ + G F T G WDL+
Sbjct: 138 KQLTG---ITQEQTDAADPFTVVFADFLEWMLSLYPSTDGVSALTDEVIFVTDGPWDLRD 194
Query: 226 KVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGI 285
+ + S I+ P +F R S + H G
Sbjct: 195 FLEKEFIYSNIQRP--------------DFIHARSS-------------ISAAWREHCGF 227
Query: 286 DDTKNITRVLQRMLADGARVQ 306
DD N+ R+L+RM+ DG R++
Sbjct: 228 DDASNVARILRRMVEDGHRIE 248
>gi|149922094|ref|ZP_01910534.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Plesiocystis pacifica SIR-1]
gi|149817031|gb|EDM76513.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Plesiocystis pacifica SIR-1]
Length = 213
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 88/190 (46%), Gaps = 31/190 (16%)
Query: 117 FLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
+LV+DLE ++EI+E +++D +T+ F RFVRP + + + +
Sbjct: 6 YLVIDLEATCDDAGAVPRREMEIIEIGAVLVDGQTLCPKREFQRFVRP--LRHRTLTPFC 63
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKT 225
+ + D A F EVI + A++ ++ G R F + G +D +
Sbjct: 64 RQLTS---ITQAEVDGAATFPEVIAELRAFM-----YDDG-----GRPRFCSWGAYD-RG 109
Query: 226 KVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGI 285
+ + + LP F + +NLK F RK GM G ++ +P+ G+HH GI
Sbjct: 110 QFEQDARFHGVALP--FTDHLNLKAGFSRVLGTRKR--YGMAGALRRLGLPLEGTHHRGI 165
Query: 286 DDTKNITRVL 295
DD +NI ++L
Sbjct: 166 DDARNIAKIL 175
>gi|297698262|ref|XP_002826233.1| PREDICTED: ERI1 exoribonuclease 2 isoform 2 [Pongo abelii]
Length = 691
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 31/238 (13%)
Query: 107 QHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKM 156
+ K Q D+ +V+D E EI+EFP ++++ T F +V+P
Sbjct: 27 RRKSKQLFDYLIVIDFESTCWNDGKHHHSQEIIEFPAVLLNTSTGQIESEFQAYVQP--- 83
Query: 157 SEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--IQHH---LWEKG----RG 207
Q E G+ + D +P K + QF W+ IQ ++ G
Sbjct: 84 --QEHPILSEFCMELTGIKQAQVDEGVPLKICLSQFCKWIHKIQQQKNIIFATGVSEPST 141
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQI--KLPPYFMEWINLKDVFYNFYKPRKSEATG 265
+K AF T +WDL + +CK Q+ + I K FY+ RK + G
Sbjct: 142 SEVKLCAFVTWSDWDLGVCLEYECKRKQLFKTSEKSLKDDIRAKSTARLFYR-RKPK--G 198
Query: 266 MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQYL 321
+ G ++ + G H G+DD++N + + +M+ DG ++IT N P +N L
Sbjct: 199 LSGALQEVGIEFSGREHSGLDDSRNTSLLAWKMIRDGCVMKITRSLNKVPSKKNSSIL 256
>gi|409051696|gb|EKM61172.1| hypothetical protein PHACADRAFT_247611, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 136
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 11/97 (11%)
Query: 215 FATCGNWDLKTKVPDQCKVSQIK---------LPPYFMEWINLKDVFYNFYKPRKSEATG 265
F TCG+WDLKT +P Q + + + PY WIN+K F + + +
Sbjct: 18 FVTCGDWDLKTMLPKQLSLVEADHGLDESGRVVAPY-NRWINIKTPFKKRFNMTRFNVS- 75
Query: 266 MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
M M+K Q+ + G HH GIDD KNI R++++M+A G
Sbjct: 76 MPAMLKKLQLELEGRHHSGIDDCKNILRIIEKMIATG 112
>gi|72387361|ref|XP_844105.1| exonuclease [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62360613|gb|AAX81024.1| exonuclease, putative [Trypanosoma brucei]
gi|70800637|gb|AAZ10546.1| exonuclease, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 291
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 47/212 (22%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV+ ID +A V FH +V P + + + + + G + + D A
Sbjct: 47 EIIEFPVVCIDTAQLAVVAEFHSYVHPVRRPK--LTAFCKELTG---ITQSVVDDAPTLP 101
Query: 187 EVIQQFEAW--------------------LIQHHLWEKGRG------------GHLKRAA 214
EVIQ+F W L + L + G+ G +
Sbjct: 102 EVIQKFGQWVREVVYPLCKMWKQQYPPSQLASNCLGDLGKKFKYDEKDNKEWVGCERMVC 161
Query: 215 FATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLKDVFYNFYK--PRKSEATGMMGMM 270
FAT G WD++ K +C V + PP F W++++ F + PRK ++ M+
Sbjct: 162 FATDGPWDMR-KFMHECSVVRDGHIFPPLFYRWVDVRKCFKQHFNKWPRK-----LVDML 215
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ ++ G H GIDD++NI R+L ++ G
Sbjct: 216 RTLRLDFEGKQHSGIDDSRNIARILIELMRRG 247
>gi|260801283|ref|XP_002595525.1| hypothetical protein BRAFLDRAFT_69069 [Branchiostoma floridae]
gi|229280772|gb|EEN51537.1| hypothetical protein BRAFLDRAFT_69069 [Branchiostoma floridae]
Length = 222
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 33/206 (16%)
Query: 116 FFLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYI 165
++ V+D E + EI+EF +++D D FH F RP + H
Sbjct: 9 YYCVVDFEATCIKPRRADFRTEIIEFGAVIVDGSNFQMADEFHEFCRPVENPVLH----- 63
Query: 166 EGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
++ K G+ + D+A PF V +F+ WL RG A T G +D
Sbjct: 64 --QFCKELTGIQQDTVDSADPFPVVFDRFQKWL-------SNRGLIDSNFALVTDGIFDC 114
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF--YKPRKSEATGMM-GMMKNRQVPMFGS 280
+ QC+VSQ+ P + + N+K + F + R+ + T + M++ + G
Sbjct: 115 NQIMRSQCEVSQMSFPSFARRFSNIKIHYMQFMGIRLRRGQPTPRIPDMLRALGISQEGQ 174
Query: 281 HHLGIDDTKNITRVLQ----RMLADG 302
H I D +NI R+++ R+ A+G
Sbjct: 175 LHSAISDARNICRIMEALSRRLRANG 200
>gi|393245393|gb|EJD52903.1| hypothetical protein AURDEDRAFT_133758 [Auricularia delicata
TFB-10046 SS5]
Length = 318
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 111 SQDLDFFLVLDLEGKI----------EILEFPVLMI-----DAKT-MAFVDLFHRFVRPS 154
Q D+F VLD+E EI+E+PV+++ D +T + VD F +VRP
Sbjct: 59 GQIYDYFCVLDVEATCVEGTDLGWPNEIIEWPVVLLGWEEHDGRTELRCVDTFRSYVRP- 117
Query: 155 KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
Q+ K + G+ + D A F+ V++ F+ +L ++ L K G + R
Sbjct: 118 ----QYRPKLSDFCTRLTGIQQSDVDGAPIFRNVLKDFQQFLRKNGLVNKN-GKKICRWI 172
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFY---------KPRKSEAT 264
+ T +D++ V QC +S I PPY M + I+++ ++ K R++
Sbjct: 173 WCTDTPYDIRDFVAKQCFISAIPHPPYLMGDIIDVRMAVRDYLDRVNSRAARKGRQNRPY 232
Query: 265 GMMGMMKNRQV------PMFGSHHLGIDDTKNITRVLQRMLADGA 303
+ + Q+ P G H GIDDT+NI R++ R++ G
Sbjct: 233 AVTSLRVPTQLQALGLGPFEGREHSGIDDTRNIARIVVRLVERGV 277
>gi|195162325|ref|XP_002022006.1| GL14410 [Drosophila persimilis]
gi|195162327|ref|XP_002022007.1| GL14411 [Drosophila persimilis]
gi|195162329|ref|XP_002022008.1| GL14412 [Drosophila persimilis]
gi|194103904|gb|EDW25947.1| GL14410 [Drosophila persimilis]
gi|194103905|gb|EDW25948.1| GL14411 [Drosophila persimilis]
gi|194103906|gb|EDW25949.1| GL14412 [Drosophila persimilis]
Length = 223
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + +++Y G + + + +P +
Sbjct: 29 EIIEFPAILVNLKTGMVEAEFHKYVMP--VESPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFGICLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ + ++ +Y K +++ ++ G + GIDD KN+ ++ +
Sbjct: 141 KPTCFNQWIDARAIYKKWY---KYCPFSFNNALEHVRLTFQGRAYSGIDDAKNLGSLICK 197
Query: 298 MLADGARVQITARRNP 313
M DGA IT P
Sbjct: 198 MFRDGAPFSITKDLTP 213
>gi|326518256|dbj|BAJ92491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 81/192 (42%), Gaps = 15/192 (7%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPS--KMSEQHINKYIEGKYGKFGVDRVWHDTALP 184
EI+EFP +++D + F R+VRP + Q K G+ + D +
Sbjct: 38 EIIEFPAVLVDGASGRIESSFRRYVRPKHHPVLTQFCRKLT-------GIRQEDVDGGVD 90
Query: 185 FKEVIQQFEAWLIQHHLWEKGRGGHLK-RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
E + +AWL G G + + A T G+WD +T + +C+ I+ P YF
Sbjct: 91 LGEALWLHDAWLKAA---TAGAGSSRRVQLAVVTWGDWDCRTMLEFECRFKGIEKPSYFD 147
Query: 244 EWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGA 303
WINL+ F + ++ + G H G+DD N R+L ++ G
Sbjct: 148 RWINLRVPFQAALG--GGGRVNLEEAVRAAGLDWEGRLHCGLDDALNTARLLAEIMRRGV 205
Query: 304 RVQITARRNPDS 315
++ IT P +
Sbjct: 206 KMTITGSLAPPA 217
>gi|393220516|gb|EJD06002.1| hypothetical protein FOMMEDRAFT_78644 [Fomitiporia mediterranea
MF3/22]
Length = 296
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 37/237 (15%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMID---------AKTMAFVDLFHRFVR 152
Q D FLVLD+E EI+E+PV+++ AK + D F FVR
Sbjct: 48 QPFDSFLVLDVEATCQEGTDFNWPNEIIEWPVVLLRWRNKDKEGRAKELYVADEFRSFVR 107
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
P + + ++ + G + + D A F +V++ F +L+++ L + +R
Sbjct: 108 P--IWKPQLSAFCTTLTG---ITQTQVDRAPKFPKVLESFREFLVRNELIDDATEAKRER 162
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFY------------NFYKPR 259
+ T G +D++ V QC +S+I++P + E ++++ V + PR
Sbjct: 163 FVWCTDGPFDIRDFVVKQCFISKIQMPTWLKGEVLDVRRVVTHCLNLQANSGGRDARAPR 222
Query: 260 KSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSR 316
+ + G H GIDDT+NI R+L + R++ P R
Sbjct: 223 RRTLNIEEQLRTLNLAEFIGRQHCGIDDTRNIARILTELAKRSIRLEPNTTIYPGRR 279
>gi|195162331|ref|XP_002022009.1| GL14413 [Drosophila persimilis]
gi|194103907|gb|EDW25950.1| GL14413 [Drosophila persimilis]
Length = 223
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP +++ KT FH++V P + +++Y G + + + +P +
Sbjct: 29 EIIEFPANLVNLKTGMVEAEFHKYVMP--VESPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD +T + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFETCLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ K ++ +Y K +++ ++ G H G+ D KN+ ++ +
Sbjct: 141 KPTCFNQWIDAKAIYKKWY---KYCPFSFNNALEHVRLTFQGRAHSGMHDAKNLGSLICK 197
Query: 298 MLADGARVQITARRNP 313
M DGA IT P
Sbjct: 198 MFRDGAPFSITKDLTP 213
>gi|299753899|ref|XP_001833615.2| double-strand siRNA ribonuclease [Coprinopsis cinerea okayama7#130]
gi|298410514|gb|EAU88160.2| double-strand siRNA ribonuclease [Coprinopsis cinerea okayama7#130]
Length = 389
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 103/249 (41%), Gaps = 51/249 (20%)
Query: 109 KCSQDLDFFLVLDLEGKI----------EILEFPVLMI---------DAKTMAFVDLFHR 149
K Q D FLVLD+EG EI+EFPV ++ A + +D F
Sbjct: 135 KSKQLFDMFLVLDIEGTCDQGSDLDFPNEIIEFPVCLLTWNDKGQDMSASELEVIDEFRS 194
Query: 150 FVRPSKMSEQHINKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG 207
FVRP+ + + + K G+ + D+A F EV+ QFEA++ ++ L G
Sbjct: 195 FVRPTW-------RPVLTDFCKDLTGITQEQVDSAPTFPEVLAQFEAFIKKNGLIND-EG 246
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDV--FYNFYKPRKSEATG 265
L R + T G +D++ + QC +S++ LP + N+ DV Y +++ +
Sbjct: 247 EPLVRFCWCTDGPFDIQNFIIKQCFISKLPLPWWLKG--NVLDVRTLVQHYVAKQTRSNH 304
Query: 266 MMGMMKNRQVP------------------MFGSHHLGIDDTKNITRVLQRMLADGARVQI 307
N VP G H GIDDT+NI R+L + G +
Sbjct: 305 GHRGRSNVTVPSRRSLNIPAQLKVLELQEFQGRQHSGIDDTRNIARILVELGKRGVHLLP 364
Query: 308 TARRNPDSR 316
P R
Sbjct: 365 NTAIQPQRR 373
>gi|261327259|emb|CBH10235.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 452
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E I+E P +++D + VD F +VRP +
Sbjct: 139 QLFDYLIVVDVEATCEYKNDNYPHEIIELPGVLVDVRR-GVVDKERSFRSYVRPQR--NP 195
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ + + G D D+A +EV++ FE W + RG + A AT G
Sbjct: 196 LLTPFCKALTGITQEDV---DSAPTLQEVVKLFEQWYTE----TIPRGA---KVALATDG 245
Query: 220 NWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
WDLK V + + I P F E+++++ F +F+ + ++ M++ Q+
Sbjct: 246 PWDLKNFVHEHSILRDHISFPTIFYEYLDIRTTFAHFFN--RGTPLKLVPMLERLQLTFE 303
Query: 279 GSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ G
Sbjct: 304 GREHCGFDDAVNIARLAVSMMRAG 327
>gi|195162323|ref|XP_002022005.1| GL14409 [Drosophila persimilis]
gi|194103903|gb|EDW25946.1| GL14409 [Drosophila persimilis]
Length = 223
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 85/196 (43%), Gaps = 20/196 (10%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFP ++++ KT FH++V P + +++Y G + + + +P +
Sbjct: 29 EIIEFPAILVNLKTGMVEAEFHKYVMP--VESPQLSEYCTSLTG---IQQKTVEAGVPLQ 83
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAA---------FATCGNWDLKTKVPDQCKVSQIK 237
+ F WL + R L + + F T NWD + +C I+
Sbjct: 84 TALNSFIEWLKKEL---SARNLVLPKMSMTNPQGNCFFVTWTNWDFGICLAKECARKNIR 140
Query: 238 LPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
P F +WI+ + ++ +Y K +++ ++ G + GIDD KN+ ++ +
Sbjct: 141 KPTCFNQWIDARAIYKKWY---KYCPFSFNNALEHVRLTFQGRAYSGIDDAKNLGILICK 197
Query: 298 MLADGARVQITARRNP 313
M DGA IT P
Sbjct: 198 MFRDGAPFSITKDLTP 213
>gi|340052994|emb|CCC47280.1| putative exonuclease [Trypanosoma vivax Y486]
Length = 381
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 98/247 (39%), Gaps = 52/247 (21%)
Query: 101 VDAAAFQHKCSQDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFV 151
V + + + +Q LV D E EI+EFPV+++D + V FH +V
Sbjct: 98 VPSRGGRQRTAQPFSHILVCDFEATCDESRHHFPHEIIEFPVVVVDTARLCVVAEFHSYV 157
Query: 152 RPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL--------------- 196
RP H K G+ + D A V+ +F WL
Sbjct: 158 RPV-----HHPKLTPFCIELTGITQAQVDEAPTLPVVLGRFNDWLRRVVYPLCREWKVNS 212
Query: 197 --IQHHLWEKGRGGH-----------LKRAAFATCGNWDLKTKVPDQCKVSQIK--LPPY 241
+++ L GR + + FAT G D++ K C V + PP
Sbjct: 213 RELRNDLPGVGRFVYDNEHNPEWVDCERMVCFATDGQSDMR-KFMHACSVVRDGHVFPPL 271
Query: 242 FMEWINLKDVFYNF--YKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRML 299
F WI+++ F Y+PRK + M+K G H GIDD++NI R+L ++
Sbjct: 272 FYRWIDVRACFCQHFRYRPRK-----ITDMLKRLGRSFRGRQHSGIDDSRNIARILMELM 326
Query: 300 ADGARVQ 306
G +++
Sbjct: 327 RRGYKIK 333
>gi|261327263|emb|CBH10239.1| exonuclease, putative [Trypanosoma brucei gambiense DAL972]
Length = 329
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 88/212 (41%), Gaps = 47/212 (22%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV+ ID +A V FH +V P + K G+ + D A
Sbjct: 85 EIIEFPVVCIDTAQLAVVAEFHSYVHPVRRP-----KLTAFCKELTGITQSVVDDAPTLP 139
Query: 187 EVIQQFEAWLIQ-----HHLWE---------------------------KGRGGHLKRAA 214
EVIQ+F W+ + +W+ K G +
Sbjct: 140 EVIQKFGQWVREVVYPLCKMWKQQYPPSQLASNCLGDLEKKFKYDEKDNKEWVGCERMVC 199
Query: 215 FATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLKDVFYNFYK--PRKSEATGMMGMM 270
F T G WD++ K +C V + PP F W++++ F + PRK ++ M+
Sbjct: 200 FTTDGPWDMR-KFMHECSVVRDGHIFPPLFYRWVDVRKCFKQHFNKWPRK-----LVDML 253
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ ++ G H GIDD++NI R+L ++ G
Sbjct: 254 RTLRLDFEGKQHSGIDDSRNIARILIELMRRG 285
>gi|427725307|ref|YP_007072584.1| Exonuclease RNase T and DNA polymerase III [Leptolyngbya sp. PCC
7376]
gi|427357027|gb|AFY39750.1| Exonuclease RNase T and DNA polymerase III [Leptolyngbya sp. PCC
7376]
Length = 204
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 92/202 (45%), Gaps = 41/202 (20%)
Query: 113 DLDFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRP---SKMSE 158
D D++L++DLE K+EI+E +++ +KT+ + FV+P +++
Sbjct: 21 DQDYYLIIDLEATCCDDKSIPRHKMEIIEIGAVLLHSKTLEIESEYQTFVQPILNPTLTD 80
Query: 159 --QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
+ + +G V++ H F E IQ + WL + F
Sbjct: 81 FCKTLTSITQGD-----VNQAPH-----FPEAIQGLQKWLYP-----------FRSYVFC 119
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVP 276
+ G +D KT+ C+ + P + + INLK F S+ GM G ++ +P
Sbjct: 120 SWGKYD-KTQFERDCQRHNVDYP-FPSKHINLKKSFSAIIS--SSKKFGMNGALEKLGLP 175
Query: 277 MFGSHHLGIDDTKNITRVLQRM 298
+ G+HH GIDD +NI R++Q +
Sbjct: 176 LIGTHHRGIDDARNIARIVQAL 197
>gi|115485705|ref|NP_001067996.1| Os11g0525900 [Oryza sativa Japonica Group]
gi|77551213|gb|ABA94010.1| exonuclease family protein, expressed [Oryza sativa Japonica Group]
gi|113645218|dbj|BAF28359.1| Os11g0525900 [Oryza sativa Japonica Group]
Length = 319
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 19/193 (9%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMA-FVDLFHRFVRPSKMSEQHI 161
Q+ +F+V+DLE E I+EF +++D T + F +VRP + + +
Sbjct: 18 QEFAYFVVIDLEATCERGRRIYPQEIIEFASVVVDGATGEQLAEAFRAYVRP--LHHREL 75
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA-AFATCGN 220
Y G D D + +E ++ +AWL + GG A T G+
Sbjct: 76 TDYCRELTGIAQAD---VDAGVDLREALRAHDAWLDARGVKNAAGGGGGGGGFAVVTWGD 132
Query: 221 WDLKTKVPDQCKVSQI---KLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
WD +T + +C+ I P YF WINLK F + + G+ + +
Sbjct: 133 WDCRTMLEGECRFKGIIGDGKPEYFDRWINLKVPFRQVFDRGGARRIGLEEALAVAGLAF 192
Query: 278 FGSHHLGIDDTKN 290
G H G+DD +N
Sbjct: 193 EGRPHSGLDDARN 205
>gi|289739411|gb|ADD18453.1| 3' histone exonuclease 1 [Glossina morsitans morsitans]
Length = 226
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 85/194 (43%), Gaps = 26/194 (13%)
Query: 112 QDLDFFLVLDLEG------------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
Q D+ + +D E + EI+EFP ++++ KT FH+++ P +
Sbjct: 41 QTYDYVICVDFEATCWENQAPPRWRESEIIEFPAVLVNLKTGKIEAEFHKYIMP--IESP 98
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQH------HLWEKGRGGHLKRA 213
++ + G + + D +P + + F+ WL + L + + L
Sbjct: 99 KLSAFCTKLTG---IAQKTVDNGIPLQTALMMFQEWLRKELRARHLSLPKMTKDNKLGNC 155
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR 273
AF + +WD + +C ++K PPYF +WI+L+ ++ +Y K + +++
Sbjct: 156 AFVSWTDWDFGICLHKECSRKRLKKPPYFNQWIDLRAIYKKWY---KYQPLNFADALRHV 212
Query: 274 QVPMFGSHHLGIDD 287
+ G H GIDD
Sbjct: 213 GLSFQGREHSGIDD 226
>gi|162312186|ref|XP_001713129.1| double-strand siRNA ribonuclease Eri1 [Schizosaccharomyces pombe
972h-]
gi|121732820|sp|Q08I43.1|ERI1_SCHPO RecName: Full=3'-5' exonuclease eri1; AltName: Full=Enhanced RNAi
protein
gi|115345157|emb|CAL48264.1| double-strand siRNA ribonuclease Eri1 [Schizosaccharomyces pombe]
Length = 313
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 104/219 (47%), Gaps = 35/219 (15%)
Query: 114 LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
L + L++D+E E I+E P L+ D + +D FH +VRPS ++
Sbjct: 79 LRYLLIVDVEATCEEGCGFSFENEIIELPCLLFDLIEKSIIDEFHSYVRPS--MNPTLSD 136
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQH-----------HLWEKGRG---GH 209
Y + G+ + D A F +V+++ +L +H + E +
Sbjct: 137 YCKSLT---GIQQCTVDKAPIFSDVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQ 193
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFYK-PRKSEATGMM 267
K A+A G WD+ + + Q K ++ +P + +++++ + + Y+ PR T +
Sbjct: 194 PKNWAWACDGPWDMASFLAKQFKYDKMPIPDWIKGPFVDIRSFYKDVYRVPR----TNIN 249
Query: 268 GMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQ 306
GM+++ + GS H GIDD +N++R++++M ++ +
Sbjct: 250 GMLEHWGLQFEGSEHRGIDDARNLSRIVKKMCSENVEFE 288
>gi|72387357|ref|XP_844103.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360611|gb|AAX81022.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800635|gb|AAZ10544.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 452
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 28/204 (13%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E I+E P +++D + VD F +VRP +
Sbjct: 139 QLFDYLIVVDVEATCEYKNDNYPHEIIELPGVLVDVRR-GVVDKERSFRSYVRPQR--NP 195
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ + + G D D+A +EV++ FE W + RG + A AT G
Sbjct: 196 LLTPFCKALTGITQEDV---DSAPTLQEVVKLFEQWYTE----TIPRGA---KVALATDG 245
Query: 220 NWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
WDLK V + + I P F E+++++ F +F+ + ++ M++ Q+
Sbjct: 246 PWDLKNFVHEHSILRDHISFPTIFYEYLDIRTTFAHFFN--RGTPLKLVPMLERLQLTFE 303
Query: 279 GSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ G
Sbjct: 304 GREHCGFDDAVNIARLAVSMMRAG 327
>gi|170094696|ref|XP_001878569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647023|gb|EDR11268.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 284
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 39/225 (17%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKT---------MAFVDLFHRFVR 152
Q + FLVLD+EG EI+EFPV ++ K + VD F +V+
Sbjct: 35 QPYEVFLVLDIEGTCDQGTDFNYPNEIIEFPVCLMRWKNRTDDDFCSELEVVDEFRTYVK 94
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
P ++K+ G + + D A F +V+ E +L +H L ++ L R
Sbjct: 95 PK--WRPTLSKFCTELTG---ITQAQVDDAPLFPDVLVDLEKFLAKHGLIDEESSEPLAR 149
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLPPYFME---------WINLKDVFYNFYKPRKSE- 262
+ + G +D++ V QC +SQ+K+P + W+ L+ +SE
Sbjct: 150 FCWCSDGPFDVRDFVVKQCFISQVKMPQWIQYSVVDVRKAVWLALQSAQTEQPSTHESEL 209
Query: 263 ----ATGMMGMMKNRQVPMF-GSHHLGIDDTKNITRVLQRMLADG 302
+ + ++ ++P F G H GIDD++NI R++ + G
Sbjct: 210 PTIRSLNISAQLQALELPGFEGRQHSGIDDSRNIARIVAELARRG 254
>gi|409046206|gb|EKM55686.1| hypothetical protein PHACADRAFT_256486 [Phanerochaete carnosa
HHB-10118-sp]
Length = 342
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 39/225 (17%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMI---------DAKTMAFVDLFHRFVR 152
Q D FLV+D+E EI+E+PV ++ A + VD F FVR
Sbjct: 87 QAYDAFLVVDVEATCMPGTDFNYANEIIEWPVCLLRWKYKSENGQASRLEVVDEFRSFVR 146
Query: 153 PSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQ-FEAWLIQHHLWEKGRGGHLK 211
P M ++ + G + + + A PF ++ F +++++ L + G L
Sbjct: 147 P--MWRPQLSSFCTQLTG---ITQENVNAAPPFSTMVHSAFREFMVRNGLIDAYSGEPLV 201
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFY------KPRKSEAT 264
R + + G WDL+ V QC +S++ +P + ++I+++ + + KPR+ T
Sbjct: 202 RFCWCSDGPWDLRDFVVKQCFISRMAVPTWLARDFIDVRRIVAQWQQRNDPNKPRQQGPT 261
Query: 265 ---GMMGMMKNRQV----PMFGSHHLGIDDTKNITRVLQRMLADG 302
+ M++ + P G H G DDT+N+ R++ + G
Sbjct: 262 PNCAYLPMVRQLHLLGLGPFQGRQHCGQDDTRNVARIITELARQG 306
>gi|384490325|gb|EIE81547.1| hypothetical protein RO3G_06252 [Rhizopus delemar RA 99-880]
Length = 147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 10/132 (7%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D + F +V+ QF+ +L ++ L++ A F T G +D++ + Q
Sbjct: 5 GITQDTVDNSPVFIDVLNQFQEFLAKYSLFQSST------AIFVTDGPFDIRDFITKQIT 58
Query: 233 VSQIK-LPPYF-MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
S I P YF + WIN++ +F +FY ++++ + M+ + ++ G H G+DD +N
Sbjct: 59 HSNIDPRPAYFNLPWINIRKLFKDFY--HQTQSKNIASMLSHLEMSFEGREHSGLDDARN 116
Query: 291 ITRVLQRMLADG 302
+ + +RM DG
Sbjct: 117 LAYIAKRMFEDG 128
>gi|2257567|dbj|BAA21459.1| pi077 [Schizosaccharomyces pombe]
Length = 231
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 25/196 (12%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+E P L+ D + +D FH +VRPS ++ Y + G+ + D A F
Sbjct: 20 EIIELPCLLFDLIEKSIIDEFHSYVRPSM--NPTLSDYCKSLT---GIQQCTVDKAPIFS 74
Query: 187 EVIQQFEAWLIQH-----------HLWEKGRG---GHLKRAAFATCGNWDLKTKVPDQCK 232
+V+++ +L +H + E + K A+A G WD+ + + Q K
Sbjct: 75 DVLEELFIFLRKHSNILVPSVDEIEIIEPLKSVPRTQPKNWAWACDGPWDMASFLAKQFK 134
Query: 233 VSQIKLPPYFM-EWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
++ +P + +++++ + + Y+ PR T + GM+++ + GS H GIDD +N
Sbjct: 135 YDKMPIPDWIKGPFVDIRSFYKDVYRVPR----TNINGMLEHWGLQFEGSEHRGIDDARN 190
Query: 291 ITRVLQRMLADGARVQ 306
++R++++M ++ +
Sbjct: 191 LSRIVKKMCSENVEFE 206
>gi|213409417|ref|XP_002175479.1| 3'-5' exonuclease eri-1 [Schizosaccharomyces japonicus yFS275]
gi|212003526|gb|EEB09186.1| 3'-5' exonuclease eri-1 [Schizosaccharomyces japonicus yFS275]
Length = 311
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 105 AFQHKCSQD----LDFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRF 150
A Q K S D L + LV+D+E E I+EFP L+ D + +D FH +
Sbjct: 49 ALQTKTSADKGMKLRYLLVVDVEATCEEGCGFSYMNEIIEFPCLLYDLEQKRIIDEFHTY 108
Query: 151 VRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQH----------- 199
V+P ++ ++ Y + + K + D A PFK V+ +L +H
Sbjct: 109 VKPRRIPT--LSNYCK-ELTKIPQKLI--DNAPPFKTVLDLLHEFLSKHDDKLIPPVNGP 163
Query: 200 HLWEKGR----GGHL---KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME--WINLKD 250
+ +E R H K A+A G WD+ + V + ++ PP ++ +++++
Sbjct: 164 NTFEWSRLPKTAYHFRSQKNWAWACDGPWDMASFVAKEFATTEENNPPSWINGPFVDVRS 223
Query: 251 VFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRM 298
+F + ++ KS M+ + G H G+DD +N+ RV+Q M
Sbjct: 224 LFSDAFRVSKSNINAMLSRW---NLTFEGQEHNGLDDARNLVRVIQHM 268
>gi|353234855|emb|CCA66876.1| hypothetical protein PIIN_00635 [Piriformospora indica DSM 11827]
Length = 301
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 49/241 (20%)
Query: 117 FLVLDLEGKI----------EILEFPVLMI---------DAKTMAFVDLFHRFVRPSKMS 157
FLVLD+EG EI+E+PV+++ + + + VD FH FVRP+
Sbjct: 57 FLVLDVEGTCVPSIGFDWPNEIIEWPVVLLRWDESSKSDECQRLTIVDEFHSFVRPTFQP 116
Query: 158 EQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
+ H G+ + ++A F EV+ +A+LI++ + + G L+ + T
Sbjct: 117 KLH-----PFCTELTGITQEQVNSAPTFPEVLSSCKAFLIKNGVID-SEGNPLQTYIWCT 170
Query: 218 CGNWDLKTKVPDQCKVSQIKLP---PYFMEWINLKDVFYNFYKPR-------KSEATGMM 267
G WDL+ Q +S I+ P PY + ++++ F +Y R S G
Sbjct: 171 DGPWDLRDFFTKQAYISGIQRPSWIPYKI--LDVRKTFGEWYTQRYLRRFTKNSRHNGSF 228
Query: 268 GMMKN----RQVPMF-----GSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSRNV 318
+ + +Q+ + G H GIDD++NI RVL + A G + N D+R +
Sbjct: 229 SINHSYKLSKQLELLNLTFEGREHSGIDDSRNIARVLIELSARGEPLDAA---NLDTRPI 285
Query: 319 Q 319
+
Sbjct: 286 R 286
>gi|402589059|gb|EJW82991.1| hypothetical protein WUBG_06097 [Wuchereria bancrofti]
Length = 149
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 112 QDLDFFLVLDLEG------KI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
QD D+FLVLD E KI EI+EFPV+ + K + V FHR+VRP +E+ I
Sbjct: 14 QDFDYFLVLDFEATCEEGIKIMPHQEIIEFPVIQLSGKNLEEVGRFHRYVRP---TERPI 70
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ V +LP EV+ F+ WL+ +L F T G+W
Sbjct: 71 LTSFCTDLTGIVQETVESQASLP--EVLDAFDKWLLDLNLINTDHSMK-SLFTFITSGDW 127
Query: 222 DLKTKVPDQCKVSQIKLP 239
DL +P + ++LP
Sbjct: 128 DLGVLLPSEANYRNLELP 145
>gi|427709554|ref|YP_007051931.1| Exonuclease RNase T and DNA polymerase III [Nostoc sp. PCC 7107]
gi|427362059|gb|AFY44781.1| Exonuclease RNase T and DNA polymerase III [Nostoc sp. PCC 7107]
Length = 188
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 35/198 (17%)
Query: 115 DFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+ LVLDLE ++EI+E +M++A+ + +D F F++P +
Sbjct: 8 DYLLVLDLEATCCDQGTIKRHEMEIIEIGAVMVEAQNLTVIDEFQTFIKPVRYP------ 61
Query: 164 YIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
I + K + +++ D A + E I + WL H A F + G++
Sbjct: 62 -ILTDFCKSLTSITQIYVDQAPGYPEAIAILQKWL-----------SHYPNAVFGSWGDY 109
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D + + K + P + INLK F S+ GM ++ + + G+H
Sbjct: 110 D-RNQFKQDSKFHNLPFPIAYPH-INLKQHFSE--SQSLSKRYGMAEALQLVNIELQGTH 165
Query: 282 HLGIDDTKNITRVLQRML 299
H GIDD +NI ++L +L
Sbjct: 166 HRGIDDARNIAKLLPWIL 183
>gi|215692771|dbj|BAG88201.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 206
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)
Query: 199 HHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKP 258
H W + +G K A T NWD + + +C++ +I+ PPYF WINLK F +
Sbjct: 2 HDKWLEEKGIKHKNFAVVTWSNWDCRVMLESECRLKRIRKPPYFNRWINLKVPFQEVFGG 61
Query: 259 RK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ EA + G+ G H G+DD +N R+L ++ G + IT
Sbjct: 62 VRCNLKEAVQLSGLTWE------GRAHCGLDDARNTARLLALLMHRGFKFSIT 108
>gi|196013998|ref|XP_002116859.1| hypothetical protein TRIADDRAFT_4552 [Trichoplax adhaerens]
gi|190580577|gb|EDV20659.1| hypothetical protein TRIADDRAFT_4552, partial [Trichoplax
adhaerens]
Length = 189
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 82/201 (40%), Gaps = 28/201 (13%)
Query: 114 LDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+DF+LV+D E EI+EFP L+IDA T+ FH +VRP+ IN+
Sbjct: 4 VDFYLVIDFEATTKSKYRDYHLPEIIEFPALLIDASTLEVFSEFHSYVRPT------INR 57
Query: 164 YIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ K+ K G+ + D A F V F WL + + G
Sbjct: 58 TL-SKFCKRLTGISQAMVDKASDFATVHHLFLNWLCN----ATSNRNNFSMVTSSCKGTI 112
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
+L QC+ ++ +P + WI+L +F Y + M+ Q+ G
Sbjct: 113 EL---FLTQCRREKVAIPLWIEHWIDLPIIFRKCYGYHRFPTIS--DMLHKFQIAYEGRF 167
Query: 282 HLGIDDTKNITRVLQRMLADG 302
G +N+ +L ML DG
Sbjct: 168 LHGFQRAENLAAILCGMLQDG 188
>gi|392567404|gb|EIW60579.1| hypothetical protein TRAVEDRAFT_19224 [Trametes versicolor
FP-101664 SS1]
Length = 258
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 40/246 (16%)
Query: 106 FQHKCSQDLDFFLVLDLEGKI----------EILEFPVLMIDAK----------TMAFVD 145
++ Q D FLVLD+E EI+E+PV ++ K + VD
Sbjct: 2 YKRNKQQPYDAFLVLDVEATCVEGAGFDYPNEIIEWPVCLLRWKDRDTKGKAREELEVVD 61
Query: 146 LFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG 205
F FVRP+ + ++ + G + + D A PF EV++ F +L +H L +
Sbjct: 62 EFRSFVRPTWRPQ--LSDFCTTLTG---ITQEQVDHAPPFPEVLEHFRGFLAKHQLIDDA 116
Query: 206 RGGHLKRAAFATCGNWDLKTKV---PDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE 262
G L R F + G +D++ V P + + EW + R+
Sbjct: 117 TGRRLARFCFCSDGPYDVRDFVIAPPAWLTSDVVDVRRVVGEWHASATAGADRSAERRPP 176
Query: 263 ATGMMGMMKN------RQV------PMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
+G + + RQ+ P G H GIDDT+NI R++ + G +++
Sbjct: 177 QSGAFPLPRRVTLSIPRQLHALGLEPFEGRPHSGIDDTRNIARLVVELARRGWKLEPNTP 236
Query: 311 RNPDSR 316
NP+ R
Sbjct: 237 INPNRR 242
>gi|389749260|gb|EIM90437.1| hypothetical protein STEHIDRAFT_93411 [Stereum hirsutum FP-91666
SS1]
Length = 510
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 103/238 (43%), Gaps = 40/238 (16%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMID--------AKTMAFVDLFHRFVRP 153
Q D FLVLD+E EI+E+PV ++ A + VD F FV+P
Sbjct: 87 QTYDAFLVLDVEATCMQGTDFHWPNEIIEWPVCLLMWKDKQNGMASRLDVVDEFRSFVKP 146
Query: 154 S--KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK 211
+ + + G+ + D+A F +V+ QF A+LI++ L G L
Sbjct: 147 TWRPLLSAFCTQLT-------GITQAQVDSAPHFPQVVNQFNAFLIKNGLIHPVTGERLV 199
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFY------KPRKSEAT 264
R + + G +D++ V QC +S+I +P + + ++++ + ++ RKS
Sbjct: 200 RFCWCSDGPFDVRDFVVKQCFISKIAMPRWLAGDIMDVRKLVGEWHAQSAGSSSRKSLFP 259
Query: 265 GMMGMMKNRQVPMF------GSHHLGIDDTKNITRVLQRMLADGARVQITARRNPDSR 316
+ M Q+ G H GIDDT+NI R++ + G + +P R
Sbjct: 260 RRISMNIESQLRALGLGNFQGRQHSGIDDTRNIARIVTELARRGITLIPNTNIHPGKR 317
>gi|170573706|ref|XP_001892569.1| exonuclease family protein [Brugia malayi]
gi|158601787|gb|EDP38593.1| exonuclease family protein [Brugia malayi]
Length = 193
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 112 QDLDFFLVLDLEG------KI----EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q+ D+FL+LD E KI EI+EFPV+ + K + V FHR+VRP +E+ I
Sbjct: 58 QNFDYFLILDFEATCEEGMKIMPHQEIIEFPVIQLSGKNLEEVGRFHRYVRP---TERPI 114
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ V +LP EV+ F+ WL+ +L F T G+W
Sbjct: 115 LTSFCTDLTGIVQETVESQESLP--EVLNAFDEWLLDLNLINTDHSMK-SLFTFVTSGDW 171
Query: 222 DLKTKVPDQCKVSQIKLP 239
DL +P + ++LP
Sbjct: 172 DLGVLLPSEANYRNLELP 189
>gi|238015266|gb|ACR38668.1| unknown [Zea mays]
Length = 221
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 199 HHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKP 258
H W + +G A T NWD + + +C+ +I+ PPYF WINL+ F Y
Sbjct: 2 HDKWLEDKGIKNTNFAIVTWSNWDCRIMLESECRFKRIRKPPYFNRWINLRVPFQEVYGD 61
Query: 259 RK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
+ EA + G+ G H G+DD +N R+L ++ G + IT
Sbjct: 62 VRCNLKEAVQLAGLTWE------GRAHCGLDDARNTARLLALLMHRGFKFSIT 108
>gi|83643695|ref|YP_432130.1| inhibitor of the KinA pathway to sporulation, exonuclease [Hahella
chejuensis KCTC 2396]
gi|83631738|gb|ABC27705.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Hahella chejuensis KCTC 2396]
Length = 190
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 115 DFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D++L++DLE ++E +E +M+DA ++A VD F+RP + + +
Sbjct: 8 DYYLIIDLEATCCDQGSVPRREMETIEIGAVMVDAMSLAVVDELQTFIRPVRHPQ--LTD 65
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + + D+A + E I+ + W+ H F + G++D
Sbjct: 66 FCREL---TTIKQTQVDSAPTYPEAIESLQGWM-----------RHYPNYLFCSWGDYD- 110
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K + C+ +I P + +N+K F +K GM G ++ + + GSHH
Sbjct: 111 KGQFEQDCQFHRIAYP-FASGHLNIKKQFSATQGLKKK--YGMAGALRVAGLSLEGSHHR 167
Query: 284 GIDDTKNITRVLQRMLA 300
GIDD +N+ +++ ++
Sbjct: 168 GIDDARNMAKLMPYIVG 184
>gi|392595926|gb|EIW85249.1| hypothetical protein CONPUDRAFT_141905 [Coniophora puteana
RWD-64-598 SS2]
Length = 328
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 40/247 (16%)
Query: 105 AFQHKCSQDLDFFLVLDLEGKI----------EILEFPVLMI---------DAKTMAFVD 145
A + Q D FLVLD+E EI+E+PV ++ A+ ++ VD
Sbjct: 71 AIDSRVKQPYDVFLVLDVEATCKQGSNFEWPNEIIEWPVCVMKWKDKSPSGKARELSVVD 130
Query: 146 LFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG 205
F FV+P+ + ++++ G D++ A F V++ F +L +H L +
Sbjct: 131 EFRSFVQPTWRPQ--LSQFCTDLTG-ITQDQI--KDAPTFPRVLKHFSKFLAEHGLIDPK 185
Query: 206 RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNFYKP------ 258
G + R + + G +D++ V QC +S+I +P + + ++++ V +P
Sbjct: 186 NGRPVARFCWCSDGPFDIRDFVVKQCFISKIPMPIWLKGDVMDVRRVVSMVAQPHEGSYK 245
Query: 259 ---RKSEATGMMGMMKNRQ-----VPMF-GSHHLGIDDTKNITRVLQRMLADGARVQITA 309
R S ++Q +P F G H GIDD++N+ R++ + R++
Sbjct: 246 RNTRHSANVNYFPFNISQQLRVLGLPAFQGRLHSGIDDSRNLARIIAELARRDIRLEPNT 305
Query: 310 RRNPDSR 316
NP R
Sbjct: 306 HINPRKR 312
>gi|75812567|ref|YP_320186.1| exonuclease [Anabaena variabilis ATCC 29413]
gi|75705323|gb|ABA24997.1| Exonuclease [Anabaena variabilis ATCC 29413]
Length = 192
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 115 DFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D+FLVLDLE ++EI+E +M++A+T+ +D F F++P I
Sbjct: 8 DYFLVLDLEATCCDKGTIKRHEMEIIEIGAVMVEAQTLKILDEFQTFIKP-------IRH 60
Query: 164 YIEGKYGKF--GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
I ++ K + + D A + E I + WL ++ A F + G++
Sbjct: 61 PILTEFCKLLTSITQTQVDHAPEYPEAIAMLKQWLSKY-----------PNAVFGSWGDY 109
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
D + + K I P + INLK +F K GM ++ + + G H
Sbjct: 110 D-RNQFKQDSKFHNILFPIAYPH-INLKQMFSESQDLPKR--YGMAEALQLVNIELEGIH 165
Query: 282 HLGIDDTKNITRVLQRMLAD 301
H GIDD KNI ++L +L +
Sbjct: 166 HRGIDDAKNIAKLLPWILNE 185
>gi|402225629|gb|EJU05690.1| hypothetical protein DACRYDRAFT_75019 [Dacryopinax sp. DJM-731 SS1]
Length = 497
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 103/262 (39%), Gaps = 62/262 (23%)
Query: 101 VDAAAFQHKC--SQDLDFFLVLDLEGKI----------EILEFPVLMID----------A 138
D A +HK Q D FL+LD+E EI+E+PV+++ A
Sbjct: 131 ADPLASEHKIFRRQPYDAFLLLDVEATCDEGVGFDYPNEIIEWPVVLMRWNEMDTSGRMA 190
Query: 139 KTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQ 198
F + F FVRP+ ++ + + G + + + A F EV+ QF +L+
Sbjct: 191 SLTPFAE-FRSFVRPTWATQ--LTPFCTSLTG---ITQSHINNAPTFPEVLAQFREFLVL 244
Query: 199 HHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF-MEWINLKDVFYNFYK 257
H L + L R F T G WDL+ + QC +S I +P + E ++++ + +
Sbjct: 245 HGLLDPETDEQLVRYTFVTDGPWDLRDFLVKQCWLSDIPVPAWVGQEVVDVRQLVRVALR 304
Query: 258 --------------------------------PRKSEATGMMGMMKNRQVPMF-GSHHLG 284
K + + N +P F G H G
Sbjct: 305 TFDETDPDTEPEPEPEPEPAQPEGEPERERERGTKHTGLSLPCQLHNLSLPPFQGRQHSG 364
Query: 285 IDDTKNITRVLQRMLADGARVQ 306
IDD +N+ RVLQ + G V+
Sbjct: 365 IDDARNVARVLQELARRGWVVE 386
>gi|323455145|gb|EGB11014.1| hypothetical protein AURANDRAFT_6072, partial [Aureococcus
anophagefferens]
Length = 194
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 127 EILEFPVLMIDAKTMAFVDLF-----HRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDT 181
EI+EFP +++D D+F RFVRP++ ++ + G + + D
Sbjct: 28 EIIEFPAVVVDLTLGESQDVFARPTFQRFVRPTE--RPRLSDFCTKLTG---ISQETVDA 82
Query: 182 ALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPY 241
A P +V+ F AWL + +L G + A A G WDL+ + +C + P
Sbjct: 83 AEPLADVLAAFRAWLEEQNL---APGTY----AMAADGPWDLRKFLLGECARKHLAADPR 135
Query: 242 FMEWINLKDVFYNFYKPRKSEATGMMGMMKNR----QVPMFGSHHLGIDDTKNITRVLQR 297
+ W+++ Y ++ G ++N+ + G H G+DD +NI R+ R
Sbjct: 136 WRTWVDVSLHLRKHYDVKRP------GNLENKLALLGLAFEGRPHSGLDDARNIARLALR 189
Query: 298 MLADG 302
+ DG
Sbjct: 190 LRRDG 194
>gi|194767427|ref|XP_001965817.1| GF20552 [Drosophila ananassae]
gi|190618417|gb|EDV33941.1| GF20552 [Drosophila ananassae]
Length = 159
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 180 DTALPFKEVIQQFEAWLIQH------HLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKV 233
D +P + + F WL + L + + L AF T +WD + +C
Sbjct: 13 DGGVPLQTALMMFHEWLRKELRARNLTLPKMNKSNVLGNCAFVTWTDWDFGICLAKKCTR 72
Query: 234 SQIKLPPYFMEWINLKDVFYNFYKPRK---SEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
++ YF +WI+++ ++ ++YK R S+A +G+ R+ H GIDD KN
Sbjct: 73 KRMCKAAYFNQWIDVRAIYRSWYKYRPCNFSDALSHVGLAFERRA------HSGIDDAKN 126
Query: 291 ITRVLQRMLADGARVQITARRNP 313
+ ++ M++DGA IT P
Sbjct: 127 LGALMCTMVSDGALFSITKDLTP 149
>gi|428315536|ref|YP_007113418.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria
nigro-viridis PCC 7112]
gi|428239216|gb|AFZ05002.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria
nigro-viridis PCC 7112]
Length = 189
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 38/198 (19%)
Query: 117 FLVLDLEG------------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
+LV+DLE ++E++E +M++AKT+ +D F F++P I
Sbjct: 9 YLVVDLEATCCDRQATIKQTEMEVIEIGAVMVEAKTLTIIDEFQSFIKP-------IRHP 61
Query: 165 IEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
I ++ K + + D A + E I + WL + G G R F N+
Sbjct: 62 ILTEFCKSLTSISQAQVDRAPTYPEAIALLKNWLSGYSNGVFGSWGDFDRQQFQQDSNFH 121
Query: 223 LKTKVPDQCKVSQIKLP-PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
K+P P +NLK +F RK GM + +P+ G+H
Sbjct: 122 --------------KIPFPIAYPHVNLKQLFSQKQGLRKRH--GMAKALTLAGLPLEGTH 165
Query: 282 HLGIDDTKNITRVLQRML 299
H GIDD +NI ++L +L
Sbjct: 166 HRGIDDARNIAKLLPYIL 183
>gi|323451416|gb|EGB07293.1| hypothetical protein AURANDRAFT_14950 [Aureococcus anophagefferens]
Length = 191
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKF-GVDRVWHDTALPF 185
EI+EFPV++ D +T D FH +VRP++ N + G+++ D A
Sbjct: 16 EIIEFPVVLFDTRTREITDSFHSYVRPTE------NATLSAFCTDLTGIEQATVDAAPTL 69
Query: 186 KEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN-WDLKTKVPDQCKVSQIKLP-PYFM 243
EV+ +AWL +G G A+FA + WDL+ + + + P Y
Sbjct: 70 PEVLDDLDAWLRA-----RGLVGAEPAASFALATDGWDLEHFLDVELSRKLLYKPGDYLD 124
Query: 244 EWINL----------KDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITR 293
W++L KDV K R + + M+++ ++ G H GIDD N+ R
Sbjct: 125 RWVDLSKAFDLRRAAKDVENGRKKGRSRRRSNLNTMLRHHKMEFEGRLHSGIDDATNLAR 184
Query: 294 V 294
V
Sbjct: 185 V 185
>gi|300864441|ref|ZP_07109312.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria sp. PCC
6506]
gi|300337585|emb|CBN54460.1| Exonuclease RNase T and DNA polymerase III [Oscillatoria sp. PCC
6506]
Length = 192
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 35/200 (17%)
Query: 115 DFFLVLDLEGK-----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+++LVLDLE +EI+E +M++ K + VD F F++P +
Sbjct: 11 NYYLVLDLEATCCDRETINREHMEIIEIGAVMVEPKNLTIVDEFQTFIKPVRHP------ 64
Query: 164 YIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
I ++ K + + D A + E I + WL + G G R F N+
Sbjct: 65 -ILTEFCKSLTSISQKQVDLAPTYPEAIALLKNWLSGYSNAVFGSWGDYDRKQFQQDSNF 123
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
KVP + L F E L+ +P ++A ++G+ P+ G+H
Sbjct: 124 H---KVPFPIAYPHVNLKQLFTEQQGLRK------RPGMAKALQLVGL------PLEGTH 168
Query: 282 HLGIDDTKNITRVLQRMLAD 301
H GIDD +NI ++L +L +
Sbjct: 169 HRGIDDARNIAKLLPYILGE 188
>gi|357119528|ref|XP_003561489.1| PREDICTED: ERI1 exoribonuclease 2-like [Brachypodium distachyon]
Length = 244
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 106/242 (43%), Gaps = 29/242 (11%)
Query: 79 CTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLDLEGKIE---------IL 129
CT+ V ++ HD+ ++ LD+F+V+D + E I+
Sbjct: 6 CTIFRPVFKEQR--HDLGDGKHINITGL-------LDYFVVVDFKATCEKGLMFNPQEII 56
Query: 130 EFPVLMIDAKT-MAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEV 188
EF +++D T + FH ++RP E+ + +Y G+ + D + E
Sbjct: 57 EFSSVLVDPVTGNSESPPFHSYLRPQ---ERPVLTDFCREYN--GIQQTDVDKGIVLAEA 111
Query: 189 IQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINL 248
+ + EAWL + +KGR R A T G+WD ++ + +C+ + P YF +WI+L
Sbjct: 112 LPKHEAWLKEAET-KKGRA---LRFAIVTWGDWDCRSMLDRECRHKGVASPQYFHQWIDL 167
Query: 249 KDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
K F + + R+ + + + G + G + N R+L ++ G + IT
Sbjct: 168 KIPFMDKFG-REYIPGSALKALTEAGLLWEGRRNGGFYNAHNKARLLGFLVQQGVQFSIT 226
Query: 309 AR 310
++
Sbjct: 227 SK 228
>gi|358059444|dbj|GAA94850.1| hypothetical protein E5Q_01504 [Mixia osmundae IAM 14324]
Length = 349
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 97/224 (43%), Gaps = 50/224 (22%)
Query: 113 DLDFFLVLDLEGKIE----------ILEFPVLMID----------AKTMAFVDL-----F 147
D D +LV D+E E I+E P+ M+ K + +L F
Sbjct: 79 DYDAYLVCDVEATCEDGAGYTFPNEIIELPITMLRWRKCEPRRTLKKILNEWELYVHAEF 138
Query: 148 HRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRG 207
H +V+P+ + ++KY E G + + D A ++E ++ W++ H + KG+
Sbjct: 139 HTYVQPT--WNKTLSKYCEDLTG---ISQAQVDRAPSWREALKLLSDWVLAHGIQGKGK- 192
Query: 208 GHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME-WINLKDVFYNFYKP-------- 258
++ F T G WDL+ VP C ++ + +PP E +I+L+ ++K
Sbjct: 193 ---LKSCFITDGPWDLRDFVPKTCWINGVSVPPMMTERYIDLRLCAATYFKIQPKLDSAR 249
Query: 259 ------RKSEATGMMGMMKNRQVPMF-GSHHLGIDDTKNITRVL 295
RK + + ++ +P F G H G DT+N RV+
Sbjct: 250 ALRIPHRKPDRMDVPSLLDALGLPPFEGRQHSGRADTRNTARVV 293
>gi|434398749|ref|YP_007132753.1| Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera
PCC 7437]
gi|428269846|gb|AFZ35787.1| Exonuclease RNase T and DNA polymerase III [Stanieria cyanosphaera
PCC 7437]
Length = 189
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 35/202 (17%)
Query: 112 QDLDFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
++ +FL++DLE ++EI+E ++I+AK + + F F++P
Sbjct: 5 ENYQYFLIVDLEATCCDRKTIPRHQMEIIEIGAVIIEAKELNIISEFQTFIKP------- 57
Query: 161 INKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
I I + + + + D+AL + + I F+ WL + F +
Sbjct: 58 IRHPILTNFCQQLTSITQKQIDSALNYSQAIAVFKEWLYAY-----------SNFIFGSW 106
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
G++D K D C+ Q+ P + INLK +F + + + GM ++ ++ +
Sbjct: 107 GDYDRKQFEQD-CQFHQVAYP-IASKHINLKKLFSTNQELKST--YGMKQALQLAKIELE 162
Query: 279 GSHHLGIDDTKNITRVLQRMLA 300
G+HH GIDD +NI +++ +LA
Sbjct: 163 GTHHRGIDDARNIAKLMPYILA 184
>gi|268577615|ref|XP_002643790.1| Hypothetical protein CBG02001 [Caenorhabditis briggsae]
Length = 299
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 29/211 (13%)
Query: 114 LDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVD--LFHRFVRPSKMSEQHIN 162
D L+LD E E I++F V +++ + + F+++VRP IN
Sbjct: 9 FDDLLILDFEATCEKDNYDYPPEIIQFSVAVLNTREKIIREDVSFNKYVRPV------IN 62
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+++ D A F EV QF AWL +H++ E KR AF
Sbjct: 63 PQLTDFCAELTGINQDTIDKADTFPEVYDQFTAWLNKHNIQE-------KRFAFVCDSRQ 115
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVF-YNFYKPRKSEATG---MMGMMKNRQVPM 277
D+ Q +++ LP F +W+NL ++ +F K ++ + G + M +P
Sbjct: 116 DMWRFAQYQFLLNKQPLPTIFRQWVNLGHLYEQDFRKAQQQDIWGPSFIEKMSGFYNIPF 175
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
G +H +D+ + +V +R+L DG V I
Sbjct: 176 NGHNHNAMDECAFLAKVTKRVLDDGNLVNIN 206
>gi|440682325|ref|YP_007157120.1| Exonuclease RNase T and DNA polymerase III [Anabaena cylindrica PCC
7122]
gi|428679444|gb|AFZ58210.1| Exonuclease RNase T and DNA polymerase III [Anabaena cylindrica PCC
7122]
Length = 184
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 31/195 (15%)
Query: 115 DFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
++FL++DLE ++EI+E +M++ KT F +F++P + + +
Sbjct: 4 NYFLIVDLEATCCNQRTIPRHEMEIIEIGAVMLNRKTWEIDSEFQQFIQPVRHPQ--LTA 61
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + + ++A F EVI QF+ W+ F + GN+D
Sbjct: 62 FCTELTS---ITQQQVESAPLFTEVIPQFKEWI-----------DSFPNNIFCSWGNYD- 106
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
KT+ CK I P + E N+K+ F + S GM +K+ + + G+HH
Sbjct: 107 KTQFLQDCKFHNISYP-FGSEHRNIKNEFSEYLGV--SHKFGMAQALKHLGMELQGTHHR 163
Query: 284 GIDDTKNITRVLQRM 298
GIDD +NI + + M
Sbjct: 164 GIDDARNIAAIYRYM 178
>gi|118366139|ref|XP_001016288.1| exonuclease family protein [Tetrahymena thermophila]
gi|89298055|gb|EAR96043.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 559
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 21/186 (11%)
Query: 114 LDFFLVLDLEGKI---EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYG 170
+DF D E ++ EI+EFP+++ID + +D FH FVRP++ I K
Sbjct: 64 IDFECTCDEEKRLKIQEIIEFPIVVIDLRKKEIIDRFHSFVRPTQYP---ILTPFCTKLT 120
Query: 171 KFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQ 230
G+ + D+A EV+++ + +L EK L++ + + D++ + +
Sbjct: 121 --GITQEQVDSAPTLPEVLKEVDRFL------EKYIKDGLQKVSVLNDCDSDIRNFLRKE 172
Query: 231 CKVSQIKLPPYFMEWINLKDVFYNFYKPRK--SEATGMMGMMKNRQVPMFGSHHLGIDDT 288
I + P F E+I+L+ +F P K + T + M+ + G H G+DD
Sbjct: 173 TTFKGIPVKPVFKEFIDLRRIF-----PVKISEKPTNIDHMLSCVGLTFEGVKHCGLDDA 227
Query: 289 KNITRV 294
NI RV
Sbjct: 228 TNIARV 233
>gi|313226631|emb|CBY21776.1| unnamed protein product [Oikopleura dioica]
gi|313240006|emb|CBY32366.1| unnamed protein product [Oikopleura dioica]
Length = 259
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 86/186 (46%), Gaps = 13/186 (6%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE--------QHINKYIEGKYGKFGVDRVW 178
EI EFP ++++ T + FH FVRP + E H+ K K ++ V
Sbjct: 56 EITEFPAVLVNLSTEEIISEFHEFVRPKESPELSDFCKKLTHLEKKDLSKEK--TLEEVM 113
Query: 179 HDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKL 238
D L K+V ++ + + ++ + A T +WD+ +++ + K +I++
Sbjct: 114 IDFELWTKDVQKEHDLYFYTPKAAKENIKSSKRIACICTWTDWDISSQLLSETKRKKIEI 173
Query: 239 PPYFMEWINLKDVFYNFYKP--RKSEATGMM-GMMKNRQVPMFGSHHLGIDDTKNITRVL 295
P W++L+ V + + +K E ++ + + ++ G HH GIDD +N R+
Sbjct: 174 PEMLKSWVDLRAVSRVYLQSVNKKMEHIPVLRRLFRVLKMEWEGKHHSGIDDARNTARLA 233
Query: 296 QRMLAD 301
+M A+
Sbjct: 234 VKMAAN 239
>gi|340052991|emb|CCC47277.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 434
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q DF +V+D+E E I+E P +++D + +D F +VRP
Sbjct: 118 QIFDFLIVVDVEATCERKNDNYPHEIIELPGVLVDVRR-GVIDKGRSFRSYVRPI----- 171
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
IN + G+ + D A ++V++ FE W G + FAT
Sbjct: 172 -INPILTDFCKSLTGITQENVDGAPVLQDVVKLFEEWY--RRTIPAG-----AKVVFATD 223
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G WDLK V + + ++ P F E+++++ F N++ K + + M+ +
Sbjct: 224 GPWDLKNFVYEHSIMRDHVRFPSIFYEYVDIRTTFANYFN--KGKLIKLEDMLHRMNLQF 281
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H G DD+ NI R+ M+ G
Sbjct: 282 EGRPHSGFDDSVNIARLALSMMKAG 306
>gi|342180402|emb|CCC89879.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 382
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 32/206 (15%)
Query: 112 QDLDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E EI+E P +++D + VD FH +VRP +
Sbjct: 65 QLFDYLIVVDVEATCDDNSKNYPHEIIELPGVLVDVRR-GIVDKQRSFHSYVRPRRNP-- 121
Query: 160 HINKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFAT 217
I + K G+ + D A EV++ FE W ++ G + AT
Sbjct: 122 -----ILTPFCKALTGIKQEDVDRAPSLPEVVKLFEEWYME--TIPLG-----AKVVLAT 169
Query: 218 CGNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVP 276
G WDLK V + + + P F E+I+++ F N + + + M+ +
Sbjct: 170 DGPWDLKNFVYEHSVLRDHVSFPTLFWEYIDIRTTFSNHFN--RGVPIKLTAMLHRMHLE 227
Query: 277 MFGSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ G
Sbjct: 228 FEGRQHCGFDDAVNIARLAVAMMRAG 253
>gi|71396663|ref|XP_802406.1| exonuclease [Trypanosoma cruzi strain CL Brener]
gi|70862768|gb|EAN80960.1| exonuclease, putative [Trypanosoma cruzi]
Length = 310
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 83/204 (40%), Gaps = 46/204 (22%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EFPV+ +D + V FH +VRP+K + + G+ + D A
Sbjct: 114 EIIEFPVVCVDTAELRVVAEFHSYVRPTK--NPRLTSFCTALT---GITQAQVDAAPRLP 168
Query: 187 EVIQQFEAWL--IQHHLWEKGRGGHL-----------------------------KRAAF 215
EV++ F+ WL + + L + R HL +
Sbjct: 169 EVLRHFDLWLREVVYPLCRRWRKEHLEGLNKCLKASQKRRFVYDETHNPGWIDCERMICM 228
Query: 216 ATCGNWDLKTKVPDQCKVSQIK--LPPYFMEWINLKDVFYNFY--KPRKSEATGMMGMMK 271
T G WD++ K +C V + PP F W+N++ F + +PRK + M++
Sbjct: 229 VTDGPWDMR-KFMYECSVVRDGHLFPPLFYRWVNVRHSFAEHFRMRPRK-----LNDMLR 282
Query: 272 NRQVPMFGSHHLGIDDTKNITRVL 295
+ G H GIDD++ VL
Sbjct: 283 KLGLSFHGHPHSGIDDSRKYRPVL 306
>gi|118397287|ref|XP_001030977.1| exonuclease family protein [Tetrahymena thermophila]
gi|89285297|gb|EAR83314.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1047
Score = 58.5 bits (140), Expect = 4e-06, Method: Composition-based stats.
Identities = 58/224 (25%), Positives = 102/224 (45%), Gaps = 39/224 (17%)
Query: 90 KFNHDISRDLQVDAAAFQHKCSQD-LDFFLVLDLEGK---IEILEFPVLMIDAKTMAFVD 145
KF + ++ ++ +++ S D LD+ V+D E EI+EFP+ ++D K VD
Sbjct: 173 KFTKEFISVIKSNSEELRNEKSDDPLDYLFVIDFECNQPGSEIIEFPITVVDLKQRKVVD 232
Query: 146 LFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKG 205
FH +VRP+K+ + ++ +I+ G D D + + +I + EA+L ++
Sbjct: 233 TFHSYVRPTKI--KKLSNFIKKLTGIKQEDV---DASESIETIITRVEAFLSKYQ----- 282
Query: 206 RGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP-PYFMEWINLKDVFYNFYKPRKSEAT 264
K A C N D K + ++ K Q+ + + + +INL++VF
Sbjct: 283 ---QSKAAILYDCAN-DAKF-LSNEIKNKQLNITNKFLLSYINLRNVF----------PI 327
Query: 265 GMMGMMKN---------RQVPMFGSHHLGIDDTKNITRVLQRML 299
+ G +KN + G H G DD+ NI RV M+
Sbjct: 328 NLTGGIKNISLSHALEVLDMSFEGQKHTGRDDSINIARVCMEMI 371
>gi|307104722|gb|EFN52974.1| hypothetical protein CHLNCDRAFT_26251 [Chlorella variabilis]
Length = 194
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 20/175 (11%)
Query: 127 EILEFPVLMID-AKTMAFVDLFHRFVRPSKMSEQH--INKYIEGKYGKFGVDRVWHDTAL 183
EI+E +++D A+T F R+VRP +QH ++ + G + + D +
Sbjct: 1 EIIELSCVVVDTARTTVLPVHFQRYVRP----DQHPCLSDFCTELTG---ITQAMVDGGV 53
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHL--KRAAFATCG---NWDLKTKVPDQCKVSQIKL 238
P +Q +AWL Q L + GG R F+ C +WDLK ++ +CK +I+
Sbjct: 54 PLHTALQDLDAWLRQQGLIGQ-VGGRCCSSRRCFSCCSTWRDWDLKVQMQMECKWRRIEQ 112
Query: 239 PPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITR 293
P + WI++ V++ + + + + ++ G H IDD +N R
Sbjct: 113 PRWQKRWIDIGAVWFKHSGKKGN----LRASCEAAELGWDGRAHSAIDDARNTAR 163
>gi|118346813|ref|XP_977115.1| exonuclease family protein [Tetrahymena thermophila]
gi|89288652|gb|EAR86640.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 1363
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 30/217 (13%)
Query: 95 ISRDLQVDAAAFQHKCSQDLDFFLVLDLEGK---IEILEFPVLMIDAKTMAFVDLFHRFV 151
I R +++ +++ ++ LD V+D E EI+EFPVL+ID K +D FH +V
Sbjct: 686 IQRSMEIQQKLSKNEENKKLDMLFVIDFECNQPGYEIIEFPVLVIDLKKERIIDTFHTYV 745
Query: 152 RPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK 211
+P+ + IN YI G D A F +VIQ+ EA+L ++ +E G +
Sbjct: 746 KPTTFPK--INPYISKITGIQQKDVA---NAPSFVQVIQKVEAFLQKYKDYE----GCIL 796
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATG------ 265
+ C +K++ ++ + I F +INL++VF E +G
Sbjct: 797 YDCDSDCNY--MKSEFINK---NYIPTSDVFFSYINLRNVF-------PLEISGGVINKS 844
Query: 266 MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ + Q+ G H GIDD +N V ++ G
Sbjct: 845 LSHAQQVLQMEFQGCKHKGIDDARNQALVCIELVKRG 881
>gi|434405656|ref|YP_007148541.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Cylindrospermum stagnale PCC 7417]
gi|428259911|gb|AFZ25861.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Cylindrospermum stagnale PCC 7417]
Length = 183
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 33/195 (16%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
+FL++DLE ++EI+E +M++ KT F +F++P + N
Sbjct: 4 YFLIVDLEATCCDQGSIPRHQMEIIEIGAVMLNRKTWEIDSEFQQFIQPVR------NVQ 57
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G + + + A F E I +F+AW+ F + GN+D
Sbjct: 58 LTGFCTELTSISQQDVANAPQFAEAISKFKAWI-----------DSFPNHIFCSWGNYD- 105
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K++ C ++ P + E IN+K F + S+ GM + + + + G+HH
Sbjct: 106 KSQFLQDCDFHKVPYP-FGSEHINIKKEFSEYLGV--SKGFGMAKALNHLGIELKGTHHR 162
Query: 284 GIDDTKNITRVLQRM 298
GIDD +NI + + M
Sbjct: 163 GIDDARNIAAIYRHM 177
>gi|268571701|ref|XP_002648789.1| Hypothetical protein CBG11812 [Caenorhabditis briggsae]
Length = 302
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 94/217 (43%), Gaps = 20/217 (9%)
Query: 114 LDFFLVLDLEGKIE--ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGK 171
D L+LD E E + + PV +I ++ +++ + +R + + + + K +
Sbjct: 9 FDDLLILDFETTCEEGVFDHPVEIIQM-SVVVLNITDKLIREDVVFNKLVKPVVNQKLSQ 67
Query: 172 F-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTK 226
+ G+ + D A F V QQF WL +H+L E+ + AFA G D+
Sbjct: 68 YCIELTGIQQDAVDKADIFSVVYQQFLEWLKKHNLDER-------KFAFACDGRQDMWRL 120
Query: 227 VPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR---QVPMFGSHHL 283
Q + + P F +WIN+ +F + K + G + K ++ G H
Sbjct: 121 AQYQFLLIKENFPAIFRQWININRIFQDIAKEKYLSIAGRSNLEKMSNFFEIKFEGHAHN 180
Query: 284 GIDDTKNITRVLQRMLADGARVQITARRNPDS--RNV 318
+DD K + +V +++L G V + N S RNV
Sbjct: 181 AMDDVKFLAQVAKKILDTGRFVTVNETLNCISGWRNV 217
>gi|434384994|ref|YP_007095605.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Chamaesiphon minutus PCC 6605]
gi|428015984|gb|AFY92078.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Chamaesiphon minutus PCC 6605]
Length = 192
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 57/209 (27%)
Query: 117 FLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRP------------ 153
LV+DLE ++E +E +M+ +A VD F F++P
Sbjct: 12 ILVVDLEATCCDLQSIPRHQMETIEIGAVMVSTDNLAIVDEFQTFIKPIRHPILTEFCLQ 71
Query: 154 -SKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKR 212
+ +++Q +N TA F + I+ ++ WL Q +
Sbjct: 72 LTSITQQQVN------------------TAPTFPDAIELWQPWLSQ-----------FDK 102
Query: 213 AAFATCGNWDLKTKVPDQCKVSQIKLP-PYFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
F + G++D K ++ K +I LP P INLK++F K GM +
Sbjct: 103 TIFGSWGDYDRK-QLQQDSKHHRIDLPYPVSSHHINLKELFSTAQGLNKR--YGMAQALN 159
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
+ + G+HH GIDD +NI+++L +L
Sbjct: 160 LVNIDLTGTHHRGIDDARNISKLLPFILG 188
>gi|320162584|gb|EFW39483.1| three prime histone mRNA exonuclease [Capsaspora owczarzaki ATCC
30864]
Length = 897
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMM 270
+R A G WDL+ + QC+ SQI P + +W+NL+ F FY + G+ M+
Sbjct: 793 RRFAILCDGPWDLRDFMTKQCRHSQIFRPWFTQQWVNLRMHFSKFYHMKLG---GIDFML 849
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
++ + G+ H G+DD NI RV +ML DG
Sbjct: 850 ESLGMQFQGNKHSGLDDATNIARVACQMLRDG 881
>gi|341874213|gb|EGT30148.1| CBN-CRN-4 protein [Caenorhabditis brenneri]
Length = 298
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 117 FLVLDLEGK---------IEILEFPVLMIDAKTMAFVD--LFHRFVRPSKMSEQHINKYI 165
L+LD E E+++F V+++D KT ++ F+++VRP IN +
Sbjct: 11 LLILDFETTSEEANCDYPFEVIQFSVVVLDVKTNTILENVSFNKYVRPV------INPIL 64
Query: 166 EGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC-GNWDL 223
F G+ + D+A F+EV QF WL G +R C D+
Sbjct: 65 SKHCADFTGIAQESLDSAATFREVYNQFVNWL--------NTNGFAERQFAVVCDSRQDM 116
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVF--YNFYKPRKS--EATGMMGMMKNRQVPMFG 279
Q K+ LP +F ++++L F RK E T + M + + G
Sbjct: 117 WRIAQYQFKLINATLPSFFRQYVSLWRAFEAEQDRSGRKELLEKTYIGKMAEYYGLDTTG 176
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQI 307
H ++D K I ++Q+MLA GA + I
Sbjct: 177 RAHDSLNDCKTIATIVQKMLATGATIHI 204
>gi|403416188|emb|CCM02888.1| predicted protein [Fibroporia radiculosa]
Length = 416
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 29/153 (18%)
Query: 112 QDLDFFLVLDLEGKI-----------EILEFPVLMID---------AKTMAFVDLFHRFV 151
Q D FLVLD+EG EI+E+PV ++ AK + V F FV
Sbjct: 177 QPYDAFLVLDVEGTCVEGSSSFDYPNEIIEWPVCLLRWKDKSPDGIAKELVVVAEFRSFV 236
Query: 152 RPS--KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGH 209
RP+ + Q G+ + D+A F E++Q FE +L + L E G
Sbjct: 237 RPTWRPLLSQFCTNLT-------GITQDQVDSAPEFTELLQMFETFLEDNGLIEPVTGRR 289
Query: 210 LKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF 242
L R + + G +D++ V QC +S++++P +
Sbjct: 290 LVRYCWCSDGPFDVRDFVVKQCFISKVRMPAWI 322
>gi|440804101|gb|ELR24980.1| Znfinger in Ran binding protein [Acanthamoeba castellanii str.
Neff]
Length = 732
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 24/203 (11%)
Query: 113 DLDFFLVLDLEGKI-------------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
+ D+ +V+D E EI+EFP ++ID +D +VRP S+
Sbjct: 8 EYDYLVVIDFEATCDEGEQPKVTRENQEIIEFPWVVIDLVNQQVIDKRQIYVRPEWTSQ- 66
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ + G D + L E + QF+ + + +G K T G
Sbjct: 67 -LTPFCVKLTGI--TDDKLREAPL-LHEAMAQFDRY-VDDCFARRG-----KTFCILTDG 116
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+WDLK + + + I P++M + ++K+ F + +M M+++ + M G
Sbjct: 117 DWDLKMCLLQETRKKDIARAPHYMTYFDVKEEFLKVFPQPSHYKPSLMTMLRHLNLVMEG 176
Query: 280 SHHLGIDDTKNITRVLQRMLADG 302
HH G+ D NI+ ++ ++ G
Sbjct: 177 RHHSGLYDCVNISNIVLELIRHG 199
>gi|414076664|ref|YP_006995982.1| exonuclease [Anabaena sp. 90]
gi|413970080|gb|AFW94169.1| exonuclease [Anabaena sp. 90]
Length = 185
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
+FL++DLE ++EI+E +M++ +T D F +F++P + N
Sbjct: 4 YFLIIDLEATCCNQKSIPRHQMEIIEIGAVMLNRQTWEIDDEFQQFIKPVR------NPQ 57
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + + + D A F EV+ + W+ F + GN+D
Sbjct: 58 LTAFCTELTSISQQQVDAAQSFPEVMSKLTDWM-----------NLFPNNIFCSWGNYD- 105
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
K++ CK I P + E N+K F + S GM ++ + + G+HH
Sbjct: 106 KSQFLQDCKFHHIPYP-FGAEHRNIKTEFSEYLGV--SHKFGMAQALERLGMELQGTHHR 162
Query: 284 GIDDTKNITRVLQRM 298
GIDD +NIT + + M
Sbjct: 163 GIDDARNITAIYRYM 177
>gi|268577613|ref|XP_002643789.1| Hypothetical protein CBG02000 [Caenorhabditis briggsae]
Length = 299
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 107 QHKCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVD--LFHRFVRPSK 155
+++C D L+LD EG E I++F V +++ + + F+++VRP
Sbjct: 4 EYRCH--FDNLLILDFEGTCEKDDHDYPSEIIQFSVCVLNTRDKIIREDVSFNKYVRPV- 60
Query: 156 MSEQHINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
IN + + G+D+ D A F EV QF AWL +H E KR A
Sbjct: 61 -----INPKLTDFCAELTGIDQDTIDNARTFPEVYNQFCAWLKEHDFQE-------KRFA 108
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKN-- 272
D+ Q +++ P F +W+NL + + + + +++
Sbjct: 109 IVCDSRQDMWRLAQYQFLLNKQPFPTIFRQWVNLSLYYRQDLRMAQQQDAVHQSLIERMS 168
Query: 273 --RQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITARRN--PDSRNVQY 320
+P G H +DD + +V +R+L +G V I SRNV +
Sbjct: 169 AFYNIPNEGQAHNAMDDCSFLAKVTKRILDNGTFVNINESLKCIAGSRNVPF 220
>gi|145509679|ref|XP_001440778.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124408006|emb|CAK73381.1| unnamed protein product [Paramecium tetraurelia]
Length = 431
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 87/202 (43%), Gaps = 30/202 (14%)
Query: 112 QDLDFFLVLDLEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
Q D ++LD E EI+EFP + + + F ++++P +
Sbjct: 232 QGFDNIIILDFEATCVRESDKKYLQEIIEFPAQVYNVQERKVKKEFQKYIKPVE------ 285
Query: 162 NKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGN 220
N + + G+ + D + + I +F E +G L++ TCG+
Sbjct: 286 NPILSDFCTELTGITQQQVDEGILLDQAINEF---------IEFKQG--LQKCCILTCGD 334
Query: 221 WDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF-YNFYKPRKSEATGMMGMMKNRQVPMFG 279
+DL + + I + +IN+K VF + P+ + M+ M+K + + G
Sbjct: 335 YDLHL-LKKEAARKGIPISRELQYYINIKKVFPKSLRNPKDPKDPCMVEMLKLCGLDLLG 393
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
HH GIDD KNITR++ ++ +
Sbjct: 394 RHHSGIDDVKNITRIVHYLINE 415
>gi|242084190|ref|XP_002442520.1| hypothetical protein SORBIDRAFT_08g021270 [Sorghum bicolor]
gi|241943213|gb|EES16358.1| hypothetical protein SORBIDRAFT_08g021270 [Sorghum bicolor]
Length = 238
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 28/196 (14%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI+EF +++ T FH +VRP + Y G D D +
Sbjct: 55 EIIEFSSVLVSGSTGQLESTFHTYVRPR--LHPKLTDYCRDLNGIRQKD---VDAGMELA 109
Query: 187 EVIQQFEAWLIQHHLWEKGRGGHLKRAAF----ATCGNWDLKTKVPDQCKVSQIKLPPYF 242
++ WL + G K + F T GNWD ++ + +C++ I P YF
Sbjct: 110 VALRMHGTWLQEM--------GTKKSSHFCFVVVTWGNWDCRSMLEPECRLKGIDRPLYF 161
Query: 243 MEWINLKDVF---YNFYKPRK--SEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
WINL+ F + KP+ ++A M+GM G DD +N +L+
Sbjct: 162 DRWINLRIPFVATFGGSKPKADLADAVRMVGMEWE------GRPRGASDDARNTALLLRE 215
Query: 298 MLADGARVQITARRNP 313
++ G + IT+ P
Sbjct: 216 LMRRGVELGITSSLVP 231
>gi|242209587|ref|XP_002470640.1| predicted protein [Postia placenta Mad-698-R]
gi|220730319|gb|EED84178.1| predicted protein [Postia placenta Mad-698-R]
Length = 320
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 24/166 (14%)
Query: 101 VDAAAFQHKCSQDLDFFLVLDLEGKI-----------EILEFPVLMID---------AKT 140
V+ A + Q D FLVLD+EG EI+E+PV ++ AK
Sbjct: 86 VNQEAIRQGTKQPYDAFLVLDVEGTCVEGTARFDYPNEIIEWPVCLLRWKDKDHNGLAKE 145
Query: 141 MAFVDLFHRFVRPS---KMSEQHINKYIEGKYGKFGVDRVWHDTALP-FKEVIQQFEAWL 196
+ VD + FV+P+ ++S+ N + + P F +++ F A+L
Sbjct: 146 LEVVDEYRSFVKPTWRPRLSDFCTNLTGITQLSSVSLAMQAQVNGAPTFTTLLESFTAFL 205
Query: 197 IQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF 242
+H L E G L R + T G +D++ V QC +S++ +P +
Sbjct: 206 EKHGLIEPMTGRRLIRYCWCTDGPFDIRDFVVKQCFISRVAMPTWI 251
>gi|427716974|ref|YP_007064968.1| Exonuclease RNase T and DNA polymerase III [Calothrix sp. PCC 7507]
gi|427349410|gb|AFY32134.1| Exonuclease RNase T and DNA polymerase III [Calothrix sp. PCC 7507]
Length = 183
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 41/199 (20%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
+FL++DLE ++EI+E +M++ + F F++P +
Sbjct: 4 YFLIVDLEATCSDDGSIPRHEMEIIEIGAVMLNRENWEIDSEFQTFIKPIR--------- 54
Query: 165 IEGKYGKFGVDRV---WHD--TALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
K F + HD A F + I+ F+ W+ F + G
Sbjct: 55 -HPKLTNFCTELTTICQHDVENAPEFAKAIKNFQEWMYS-----------FPNYIFCSWG 102
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
N+D KT+ CK I P + E N+K F + KS GM + + ++ + G
Sbjct: 103 NYD-KTQFIQDCKFHNISYP-FNSEHRNIKKEFSEYIVTSKS--FGMAQALNHLEIELKG 158
Query: 280 SHHLGIDDTKNITRVLQRM 298
+HH GIDD +NI + + M
Sbjct: 159 THHRGIDDARNIASIYRYM 177
>gi|401416022|ref|XP_003872506.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488730|emb|CBZ23977.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 405
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 36/208 (17%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E ++E P ++ID +T VD FH FV+P +
Sbjct: 71 QLFDYIIVVDVEATCEQNARSYPHEVIEIPGVLIDVRT-GQVDRARSFHTFVKPWR---- 125
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + + G+ +V D A E IQ FE W + RG + FA
Sbjct: 126 --NPRLTPFCTQLTGITQVVVDAAPSITEAIQLFEKWYRE----TIPRGA---KTIFAAD 176
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMMKNRQ 274
G WD K + + + + P F E+++++ F N P K +A M++
Sbjct: 177 GPWDFKNFIHEHHILRDHVSFPSIFYEYLDIRTTFAHRLNHGVPIKLDA-----MLRKMN 231
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ G H G DD NI R+ M+ G
Sbjct: 232 LRFDGRPHNGFDDAYNIARLAVAMMKAG 259
>gi|313215127|emb|CBY42833.1| unnamed protein product [Oikopleura dioica]
Length = 604
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI EFP ++++ T + FH FV P + E D T L K
Sbjct: 14 EITEFPAVLVNLSTEEIISEFHEFVCPKESPELS--------------DFCKKLTHLEKK 59
Query: 187 EVIQQ--FEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME 244
++ ++ E +I LW K F T +WD+ +++ + K +I++P
Sbjct: 60 DLSKEKTLEEVMIDFELWTKDVQKE-HDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKS 118
Query: 245 WINLKDVFYNFYKPRKSEATGMMGMMKN--RQVPM--FGSHHLGIDDTKNITRVLQRMLA 300
W++L+ V Y ++ G + +++ R + M G HH GIDD +N R+ +M A
Sbjct: 119 WVDLRAV-SRVYLQSVNKKMGHIPVLRRLFRVLKMEWEGKHHSGIDDARNTARLAVKMAA 177
Query: 301 D 301
+
Sbjct: 178 N 178
>gi|172087346|ref|XP_001913215.1| hypothetical exonuclease containing protein-like protein
[Oikopleura dioica]
gi|42601342|gb|AAS21368.1| hypothetical exonuclease containing protein-like protein
[Oikopleura dioica]
Length = 646
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFK 186
EI EFP ++++ T + FH FV P + E D T L K
Sbjct: 56 EITEFPAVLVNLSTEEIISEFHEFVCPKESPELS--------------DFCKKLTHLEKK 101
Query: 187 EVIQQ--FEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME 244
++ ++ E +I LW K F T +WD+ +++ + K +I++P
Sbjct: 102 DLSKEKTLEEVMIDFELWTKDVQKE-HDLYFYTPKDWDISSQLLSETKRKKIEIPEMLKS 160
Query: 245 WINLKDVFYNFYKPRKSEATGMMGMMKN--RQVPM--FGSHHLGIDDTKNITRVLQRMLA 300
W++L+ V Y ++ G + +++ R + M G HH GIDD +N R+ +M A
Sbjct: 161 WVDLRAV-SRVYLQSVNKKMGHIPVLRRLFRVLKMEWEGKHHSGIDDARNTARLAVKMAA 219
Query: 301 D 301
+
Sbjct: 220 N 220
>gi|125534582|gb|EAY81130.1| hypothetical protein OsI_36313 [Oryza sativa Indica Group]
Length = 192
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMA-FVDLFHRFVRPSKMSEQHI 161
Q+ +F+V+DLE E I+EF +++D T + F +VRP + + +
Sbjct: 18 QEFAYFVVIDLEATCERGRRIYPQEIIEFASVVVDGATGEQLAEAFRAYVRP--LHHREL 75
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA-AFATCGN 220
Y G D D + +E ++ +AWL + GG A T G+
Sbjct: 76 TDYCRELTGIAQAD---VDAGVDLREALRAHDAWLDARGVKNAAGGGGGGGGFAVVTWGD 132
Query: 221 WDLKTKVPDQCKVSQI---KLPPYFMEWINLKDVFYNFYK 257
WD +T + +C+ I P YF WINLK F Y+
Sbjct: 133 WDCRTMLEGECRFKGIIGDGKPEYFDRWINLKVPFRQIYE 172
>gi|119486052|ref|ZP_01620114.1| Exonuclease [Lyngbya sp. PCC 8106]
gi|119456827|gb|EAW37955.1| Exonuclease [Lyngbya sp. PCC 8106]
Length = 191
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 33/202 (16%)
Query: 112 QDLDFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQH 160
Q ++ L++DLE ++EI+E +M++ K + V+ F F++P
Sbjct: 4 QHYNYCLIIDLEATCCDQHTILRSEMEIIEIGAVMVETKKLTSVNEFQTFIKP------- 56
Query: 161 INKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
I I K+ + + + + A + E I+ + WL Q+ HL + +
Sbjct: 57 IRHPILTKFCQQLTSITQAQVEQAPHYPEAIKNLKNWLSQY------SDSHL---IWGSW 107
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
G++D + + + + P + INLK +F + GM +K +P+
Sbjct: 108 GDYD-RRQFDQDSQFHHVSFPIGYPH-INLKKMFSTSQGLKGR--YGMADALKLANIPLE 163
Query: 279 GSHHLGIDDTKNITRVLQRMLA 300
G+HH GIDDT+NI +++ +L
Sbjct: 164 GTHHRGIDDTRNIAKLMPYILG 185
>gi|350586285|ref|XP_003128134.3| PREDICTED: ERI1 exoribonuclease 3-like [Sus scrofa]
Length = 232
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 112 QDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
Q +FLVLD E EI+EFP+L ++ +TM FH +V+P + +
Sbjct: 63 QRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTFHMYVQP--VVHPQLTP 120
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ G+ + D ++V+++ + W+ + L + ++ F TCG+WDL
Sbjct: 121 FCTELT---GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDL 172
Query: 224 KTKVPDQCKVSQ 235
K + QC Q
Sbjct: 173 KVML--QCPGPQ 182
>gi|149280749|ref|ZP_01886857.1| hypothetical protein PBAL39_05951 [Pedobacter sp. BAL39]
gi|149228496|gb|EDM33907.1| hypothetical protein PBAL39_05951 [Pedobacter sp. BAL39]
Length = 181
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR 273
A+A+ G +DLK + QC I P + +N+K +F K R S+ GM G ++
Sbjct: 99 AWASFGAYDLK-QFQRQCAAYNIGYP-FGPSHVNVKTLFA--LKKRLSQEQGMSGALEML 154
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRML 299
+P+ G+HH G+DD KNI ++L+ +L
Sbjct: 155 NIPLEGTHHRGVDDAKNIAKILRWIL 180
>gi|449547644|gb|EMD38612.1| hypothetical protein CERSUDRAFT_123180 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 51/235 (21%)
Query: 115 DFFLVLDLEGKIEILEFPVLMI-----DAKT----MAFVDLFHRFVRPS---KMSEQHIN 162
D FLVLD+E E+PV ++ D+ T + VD F FV+P+ +S+ +N
Sbjct: 37 DAFLVLDVESTC--FEWPVCLMCWKKSDSGTPECVLEVVDTFRSFVKPTWKPTLSQFCVN 94
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQF-EAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
GV + D A F E+I+ F + +++ + L + + G++
Sbjct: 95 FT--------GVTQTDVDNAPTFPEMIKTFHDDFMVHNGLLDPNDDSRKVEYTWCCDGHF 146
Query: 222 DLKTKVPDQCKVSQIKLPPYFM-EWINLKDVFYNF------YKPRKSEATGMMGMMK--- 271
D++ + QC +SQI++P + +++N+K++ PR ++ + MM+
Sbjct: 147 DIQDFLLKQCFISQIEVPNWMRGDFMNVKELVKGHCTSVAKQAPRITKGRRTITMMRIPI 206
Query: 272 --------NRQVPMFG------SHHLGIDDTKNITRVLQRMLADGARVQITARRN 312
+Q+ + G H GIDDT+N L R+LA+ AR+ I + N
Sbjct: 207 PLPYPFNIEKQLEVLGLGKFDGRKHCGIDDTRN----LARILAELARLGIVLKPN 257
>gi|71650409|ref|XP_813903.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70878830|gb|EAN92052.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 394
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E I+EFP ++ID + VD F +V+P +
Sbjct: 80 QLFDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRR-GIVDTRRSFRSYVKPWR---- 134
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + K G+ + D A EV++ FE W G + AFA
Sbjct: 135 --NPVLSEFCKKLTGISQEDVDNAPGLPEVVKAFERWY--RETIPIG-----AKVAFAAD 185
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G WD K + + + + P F E+++++ F + + + + M++ ++
Sbjct: 186 GPWDFKNFIYEHSILRDHVSFPGIFYEYLDIRTTFAHHFN--RGAPIKLDAMLRRMRLRF 243
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ G
Sbjct: 244 EGRPHCGFDDAVNIARLAVAMMRAG 268
>gi|146092931|ref|XP_001466577.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398018621|ref|XP_003862475.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070940|emb|CAM69616.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500705|emb|CBZ35782.1| hypothetical protein, conserved [Leishmania donovani]
Length = 405
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 87/212 (41%), Gaps = 44/212 (20%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E ++E P ++ID +T VD FH FV+P + S
Sbjct: 71 QLFDYIIVVDVEATCEQNSRNYPHEVIEIPGVLIDVRT-GQVDRARSFHTFVKPWRNS-- 127
Query: 160 HINKYIEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
+ F G+ + D A E IQ FE W + RG +
Sbjct: 128 --------RLTPFCTQLTGITQEVVDAAPSITEAIQLFEKWYRE----TIPRGA---KTI 172
Query: 215 FATCGNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMM 270
FA G WD K + + + + P F E+++++ F N P K +A M+
Sbjct: 173 FAADGPWDFKNFIHEHHILRDHVGFPSIFYEYLDIRTTFAHHLNHGVPIKLDA-----ML 227
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ + G H G DD NI R+ M+ G
Sbjct: 228 RKMNLRFDGRPHNGFDDAYNIARLAVAMMKAG 259
>gi|71417705|ref|XP_810633.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70875194|gb|EAN88782.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 394
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E I+EFP ++ID + VD F +V+P +
Sbjct: 80 QLFDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRR-GIVDTRRSFRSYVKPWR---- 134
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + K G+ + D A EV++ FE W + G + AFA
Sbjct: 135 --NPVLSEFCKKLTGISQEDVDNAPGLPEVVKAFERWYRE--TIPIG-----AKVAFAAD 185
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G WD K + + + + P F E+++++ F + + + + M++ ++
Sbjct: 186 GPWDFKNFIYEHSILRDHVSFPGIFYEYLDIRTTFAHHFN--RGAPIKLDAMLRRMRLRF 243
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ G
Sbjct: 244 EGRPHCGFDDAVNIARLAVAMMRAG 268
>gi|427733803|ref|YP_007053347.1| exonuclease [Rivularia sp. PCC 7116]
gi|427368844|gb|AFY52800.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Rivularia sp. PCC 7116]
Length = 181
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 86/197 (43%), Gaps = 30/197 (15%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
+FL++D+E ++EI+E +M++ T A + +F++P + K
Sbjct: 4 YFLIVDVEATCCNDGSIPKEEMEIIEIGAVMLNRSTWAIDSEYQQFIKPVRHP-----KL 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ + + A F EVI QF+ W+ + + F + GN+D
Sbjct: 59 TSFCTELTSITQKNLEPAPTFPEVIPQFKKWIDSY-----------PKNIFCSWGNYDKN 107
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+ D C + P + E N+K F + Y K + G+M ++ + G+HH G
Sbjct: 108 QFILD-CSFHHLPYP-FGTEHRNIKKEF-SLYSDNKKKRFGVMQALQYLGLEFQGTHHRG 164
Query: 285 IDDTKNITRVLQRMLAD 301
IDD +NI +++ + D
Sbjct: 165 IDDARNIAAIVKYINQD 181
>gi|118384040|ref|XP_001025173.1| exonuclease family protein [Tetrahymena thermophila]
gi|89306940|gb|EAS04928.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 639
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 113 DLDFFLVLDLE-----GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEG 167
D + +D E K EI+EFP+ +ID + VD F +V+PS +I K+I
Sbjct: 412 DFQYLFFIDFECNFFNKKFEIIEFPLHVIDVNSKEIVDSFVSYVKPSN----NITKFI-T 466
Query: 168 KYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV 227
+ K DT + ++QQ +Q+ L + + G K A C + T +
Sbjct: 467 RLTKIT------DTQVKNAPILQQV-LVNVQNFLEKYLKVGIDKCAVIYDCDSDS--TFL 517
Query: 228 PDQCKVSQIKLPPYFMEWINLKDVF-YNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGID 286
++ +IK+PP F ++I LK VF S + M+ ++ + G H G D
Sbjct: 518 FNETSFKKIKVPPIFEKYICLKSVFPVEIANKAPSSLSQMLQILD---MKFEGQKHCGAD 574
Query: 287 DTKNITRVLQRMLADG 302
D+ N +V Q++L G
Sbjct: 575 DSMNQAKVGQKLLQLG 590
>gi|163753221|ref|ZP_02160345.1| hypothetical protein KAOT1_13712 [Kordia algicida OT-1]
gi|161326953|gb|EDP98278.1| hypothetical protein KAOT1_13712 [Kordia algicida OT-1]
Length = 182
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMM 270
K+ +A+ G +DL + QCK+ ++ P E IN+K F RK GM G +
Sbjct: 95 KQYTWASYGQYDLNM-LKRQCKLRNVEYP-MGQEHINVKTTFTEVKGLRKK--VGMNGAL 150
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVL 295
++P+ G+HH G+DD KNI ++L
Sbjct: 151 NILKIPLEGTHHRGVDDAKNIAKIL 175
>gi|407410781|gb|EKF33094.1| hypothetical protein MOQ_003041 [Trypanosoma cruzi marinkellei]
Length = 379
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRF---VRPSKMSEQ 159
Q D+ +V+D+E E I+E P ++ID + VD H F V+P +
Sbjct: 65 QLFDYIIVVDVEATCESNNENYPHEIIELPGVLIDVRR-GIVDKRHSFRSYVKPWR---- 119
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + K G+ + D A EV++ FE W E G + AFA
Sbjct: 120 --NPVLSEFCKKLTGISQEDVDNAPGLPEVVKAFERWY-----RETIPIG--AKVAFAAD 170
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G WD K + + + + P F E+++++ F + + + + M++ ++
Sbjct: 171 GPWDFKNFIHEHSILRDHVSFPGIFYEYLDIRTTFAHHFN--RGAPIKLDAMLRRMRLRF 228
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ +G
Sbjct: 229 EGRPHCGFDDAVNIARLAVAMMREG 253
>gi|326492964|dbj|BAJ90338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 280
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
D + E + +AWL R R A T G+WD +T + +C+ I+ P
Sbjct: 23 DGGVDLGEALWLHDAWLKAATAGAGNR--RSGRLAVVTWGDWDCRTMLEFECRFKGIEKP 80
Query: 240 PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRML 299
YF +WINL+ F + ++ + G H G+DD N R+L ++
Sbjct: 81 SYFDQWINLRVPFQVALG--GGGRVNLQEAVRAAGLDWEGRLHCGLDDALNTARLLAEIM 138
Query: 300 ADGARVQITARRNP 313
G ++ IT P
Sbjct: 139 RRGVKMTITGSLVP 152
>gi|398993339|ref|ZP_10696291.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM21]
gi|398135099|gb|EJM24227.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM21]
Length = 180
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGRE-LDHFQRFVRPLRRPLLTLFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ +G D A P EV FE WL QH H + +A+ G++
Sbjct: 63 TRITQGNI----------DAAQPLTEVWPAFERWLGQH---------HSRLEGWASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K V + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLVQEWERLQLDSALSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLIL 178
>gi|268577619|ref|XP_002643792.1| Hypothetical protein CBG02003 [Caenorhabditis briggsae]
Length = 299
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 85/213 (39%), Gaps = 33/213 (15%)
Query: 114 LDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D L+LD E E I++F V +++ + + +R +++
Sbjct: 9 FDNLLILDFEATCEKDNHDYPSEIIQFSVAVLNTR--------EKIIREDVSFNKYVKPI 60
Query: 165 IEGKYGKF-----GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
I K F G+D+ D A F EV QF AWL +H+ E KR AF
Sbjct: 61 INPKLTDFCAELTGIDQDTIDKADTFPEVYDQFTAWLEEHNFQE-------KRYAFVCES 113
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKN----RQV 275
D+ + Q +++ LP F +W+NL + + + + T ++ +
Sbjct: 114 RQDVWRRAHYQFLLNKQPLPAIFRQWVNLSFHYREDMRLAQRQDTVHQSFIEKMSAFYDI 173
Query: 276 PMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
P G H + + + +V + +L +G V I
Sbjct: 174 PFVGQAHNAMSECSFLAKVTKHILDNGKLVTIN 206
>gi|389593763|ref|XP_003722130.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438628|emb|CBZ12387.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 405
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E ++E P ++I+ +T VD FH FV+P +
Sbjct: 71 QLFDYIIVVDVEATCEQNNRNYPHEVIEIPGVLINVRT-GQVDRARSFHTFVKPWR---- 125
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + + G+ + D A E IQ FE W WE G + FA
Sbjct: 126 --NPRLTPFCTQLTGITQEVVDAAPSITEAIQLFEKWY-----WETIPRG--AKTIFAAD 176
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMMKNRQ 274
G WD K + + + + P F E+++++ F N P K +A M++
Sbjct: 177 GPWDFKNFIHEHHILRDHVGFPSIFYEYLDIRTTFAHRLNHGVPIKLDA-----MLRKMN 231
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ G H G DD NI R+ M+ G
Sbjct: 232 LRFDGRPHNGFDDAYNIARLAVAMMKAG 259
>gi|268577621|ref|XP_002643793.1| Hypothetical protein CBG02004 [Caenorhabditis briggsae]
Length = 607
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 85/192 (44%), Gaps = 23/192 (11%)
Query: 127 EILEFPVLMIDAKTMAFVD--LFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALP 184
EI++F V++++ K + F +FVRP + ++ Y G + + D+A P
Sbjct: 31 EIIQFSVIVLNTKEKKIREDVKFDKFVRP--IINPTLSDYCTNHTG---ISQNTVDSAEP 85
Query: 185 FKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME 244
F V ++F AWL ++ E R AF DL Q + + LP F +
Sbjct: 86 FPVVFEEFSAWLQENDFQE-------TRYAFVVFSRRDLWFIAQYQFLLVKQPLPAMFKQ 138
Query: 245 WINLKDVF------YNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRM 298
W+++ ++++P ++ M + +P G+ H +D+ + ++ +R+
Sbjct: 139 WVDMNATMKKAQQGQDYHRPEENIIQDMSNIYN---IPYEGTAHNAMDNCHFLAKITKRV 195
Query: 299 LADGARVQITAR 310
L DG V + R
Sbjct: 196 LDDGNLVVVNER 207
>gi|146181163|ref|XP_001022261.2| exonuclease family protein [Tetrahymena thermophila]
gi|146144274|gb|EAS02016.2| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 200
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 24/180 (13%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPS---KMSEQHIN-KYIEGKYGKFGVDRVWHDTA 182
EI+EFP++++D K + F FV+P+ K++ N YIE K VD+ T
Sbjct: 28 EIIEFPIVIVDVKNKKIIKEFTTFVKPTYHPKLTNFIKNLTYIEQK----DVDQA--PTI 81
Query: 183 LPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYF 242
E+I Q E + + + F T + + + +K PYF
Sbjct: 82 SEVFEIITQ-----------EIKQNTNDSDSTFFIFDCDSDATYLRAEINLKNLKHSPYF 130
Query: 243 MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
++ NLK++F F+ + A + M+K + G H+ + D +NI +V+ ML G
Sbjct: 131 NQYFNLKELFDRFFNVK---AKSLENMLKILNLTQTGHPHIALHDARNICQVVMCMLEKG 187
>gi|171909847|ref|ZP_02925317.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Verrucomicrobium spinosum DSM 4136]
Length = 200
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 37/199 (18%)
Query: 117 FLVLDLE------GKI-----EILEFPVLMIDAKTMAFVDLFHRFVRPSK--MSEQHINK 163
L++DLE GK+ EI+E +++D KT+ V F F++P + + K
Sbjct: 15 LLIIDLEATCCDRGKVPRDEMEIIEIGAVLLDGKTLETVSEFGTFIKPVRHPVLTPFCTK 74
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + D A F E + + +AWL + F++ G +D
Sbjct: 75 LTT-------ITQAEVDAAPMFPEALAKLKAWLEPY-----------PDCMFSSWGAYD- 115
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGM-MGMMKNRQVPMFGSHH 282
K + C + P + +NLK F +K G +GM++ + + G+HH
Sbjct: 116 KGQFQLDCAFHDLPYP-FSEAHLNLKKAFAEARGLKKRPGMGQALGMLR---LELEGTHH 171
Query: 283 LGIDDTKNITRVLQRMLAD 301
GIDD +N+ R++ R D
Sbjct: 172 RGIDDARNMARIVARCAGD 190
>gi|47218928|emb|CAF98126.1| unnamed protein product [Tetraodon nigroviridis]
Length = 236
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 83/234 (35%), Gaps = 64/234 (27%)
Query: 129 LEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEV 188
+EFP ++++ T FH +V+P E I + G+ + + A+P
Sbjct: 8 VEFPAVLLNTSTGEVESEFHAYVQPQ---EHPILSAFCTELT--GITQTQVEAAIPLHIC 62
Query: 189 IQQFEAWLIQ-----------HHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIK 237
+ +F WL + H K F T +WDL + +C+ QI
Sbjct: 63 LSRFGRWLQELQVKTGLVFPNHPRTSAPSAASQKLCTFLTWSDWDLGVCLQYECRRKQIH 122
Query: 238 LPPYFMEWINLKD-----------------------------------------VFYNFY 256
P WI+L+ +F FY
Sbjct: 123 KPDVLNSWIDLRSTYRVGGCLPSCLPAFLPSCLPAFLPSFLSFFVLALLYFTVCLFQLFY 182
Query: 257 --KPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQIT 308
KPR G+ G +++ + G H G+DD +N + RM+ DG +++T
Sbjct: 183 DRKPR-----GLNGALQDLGIQFAGREHSGLDDARNTAGLAARMMRDGCVMKVT 231
>gi|395804241|ref|ZP_10483482.1| exonuclease [Flavobacterium sp. F52]
gi|395433885|gb|EJF99837.1| exonuclease [Flavobacterium sp. F52]
Length = 181
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFM--EWINLKDVFYNFYKPRKSEATGMMGMMK 271
+A+ G +DL + QCK I PY M E IN+K+ F + ++S TGM G ++
Sbjct: 98 TWASYGQYDLNM-LTKQCKSFGI---PYPMGEEHINVKEHFAEKFGLKRS--TGMNGALQ 151
Query: 272 NRQVPMFGSHHLGIDDTKNITRVL 295
+P+ G+HH GIDD KNI ++L
Sbjct: 152 LLNIPLEGTHHRGIDDAKNIAKIL 175
>gi|407832351|gb|EKF98421.1| hypothetical protein TCSYLVIO_010684 [Trypanosoma cruzi]
Length = 394
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 30/205 (14%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E I+EFP ++ID + VD F +V+P +
Sbjct: 80 QLFDYIIVVDVEATCESNNDNYHHEIIEFPGVLIDVRR-GIVDKRRSFRSYVKPWR---- 134
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + K G+ + D A +V++ FE W + G + AFA
Sbjct: 135 --NPVLSEFCKKLTGISQEDVDNAPGLPDVVKAFERWYRE--TIPIG-----AKVAFAAD 185
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPM 277
G WD K + + + + P F E+++++ F + + + + M++ ++
Sbjct: 186 GPWDFKNFIYEHSILRDHVSFPGIFYEYLDIRTTFAHHFN--RGAPIKLDAMLRRMRLRF 243
Query: 278 FGSHHLGIDDTKNITRVLQRMLADG 302
G H G DD NI R+ M+ G
Sbjct: 244 EGRPHCGFDDAVNIARLAVAMMRAG 268
>gi|186682035|ref|YP_001865231.1| exonuclease [Nostoc punctiforme PCC 73102]
gi|186464487|gb|ACC80288.1| Exonuclease, RNase T and DNA polymerase III [Nostoc punctiforme PCC
73102]
Length = 187
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 81/194 (41%), Gaps = 31/194 (15%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
++L++DLE ++EI+E +M++ T F +F++P + + + +
Sbjct: 8 YYLIVDLEATCCDKKTIPRHEMEIIEIGAVMLNRATWEIDSEFQQFIQPVRHPQ--LTDF 65
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
K V D A F E I +F+ W+ F + GN+D K
Sbjct: 66 C-TKLTSIQQQDV--DEAPKFIEAISRFKEWICS-----------FPNHIFCSWGNYDKK 111
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
+ D C P + E IN+K+ F + K GM + + + G+HH G
Sbjct: 112 QFIQD-CAFHNFAYP-FTSEHINIKEEFSEYLGVSKR--FGMAQALNELGIELKGTHHRG 167
Query: 285 IDDTKNITRVLQRM 298
IDD NI + +++
Sbjct: 168 IDDAHNIASIYRQI 181
>gi|14581470|gb|AAK38347.1| prion interactor PINT1 [Mus musculus]
Length = 125
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 173 GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCK 232
G+ + D ++V+++ + W+ + L + ++ F TCG+WDLK +P QC
Sbjct: 13 GIIQAMVDGQPSLQQVLERVDEWMAKEGLLDPNV-----KSIFVTCGDWDLKVMLPGQCH 67
Query: 233 VSQIKLPPYFMEWINLKDV 251
+ + YF +WINLK V
Sbjct: 68 YLGLPVADYFKQWINLKKV 86
>gi|146302457|ref|YP_001197048.1| exonuclease [Flavobacterium johnsoniae UW101]
gi|146156875|gb|ABQ07729.1| Exonuclease, RNase T and DNA polymerase III [Flavobacterium
johnsoniae UW101]
Length = 181
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 8/84 (9%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFM--EWINLKDVFYNFYKPRKSEATGMMGMMK 271
+A+ G +DL + QCK I PY M E IN+K+ F + ++S TGM G ++
Sbjct: 98 TWASYGQYDLNM-LTKQCKSFGI---PYPMGEEHINVKEHFAEKFGLKRS--TGMNGALQ 151
Query: 272 NRQVPMFGSHHLGIDDTKNITRVL 295
+P+ G+HH GIDD KNI +++
Sbjct: 152 LLNIPLEGTHHRGIDDAKNIAKIM 175
>gi|325103277|ref|YP_004272931.1| Exonuclease RNase T and DNA polymerase III [Pedobacter saltans DSM
12145]
gi|324972125|gb|ADY51109.1| Exonuclease RNase T and DNA polymerase III [Pedobacter saltans DSM
12145]
Length = 181
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 32/200 (16%)
Query: 111 SQDLDFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
++ LD L++DLE + +I+E ++D ++ D V+P +
Sbjct: 2 AKQLDKILIVDLEATCWEDKVPTGMESDIIEIGACLLDIQSGEISDSRGILVKPER---S 58
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
++K+ ++ + A+PFKE + + H + A+A+ G
Sbjct: 59 ELSKFCTSLTTI--TRQMLDEQAIPFKEACNILK------------KEYHSQSRAWASFG 104
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+D K + QC I P IN+K +F K + + GM G + +P+ G
Sbjct: 105 AYDQK-QFQRQCGALGIG-NPMGPSHINVKTLFA--LKKKLAHEQGMAGALALLDIPLEG 160
Query: 280 SHHLGIDDTKNITRVLQRML 299
+HH G+DD +NI ++L+ +L
Sbjct: 161 THHRGVDDARNIAKILRWIL 180
>gi|268578591|ref|XP_002644278.1| Hypothetical protein CBG14050 [Caenorhabditis briggsae]
Length = 212
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 86/209 (41%), Gaps = 29/209 (13%)
Query: 114 LDFFLVLDLEGK---------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D L+LD E E+++F V+ +D K F++FVRP +N
Sbjct: 8 FDHLLILDFETTSDGEKHDYPFEVIQFSVVPLDVKLEGIA--FNKFVRPV------VNPI 59
Query: 165 IEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ F G+ + + + A F V +QF WL + G ++ A + D+
Sbjct: 60 LSNYCADFTGIKQEFLNAADTFLVVYKQFLEWL-------QKNGFQERKLAIVCDSSQDM 112
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYN-FYKPRKSEATGMMGMMKNRQ---VPMFG 279
Q ++ + +P F +WIN+K F + +K++ G + K + + G
Sbjct: 113 WRIAQYQFRLVRETMPSMFRQWINIKRTFDDGLEDGQKNKLVGKSNIEKMSSYLGIELSG 172
Query: 280 SHHLGIDDTKNITRVLQRMLADGARVQIT 308
H + D NI + Q++L G V I
Sbjct: 173 KAHDALSDCLNIAAITQKILEIGCPVTIN 201
>gi|158337902|ref|YP_001519078.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158308143|gb|ABW29760.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 183
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 57/210 (27%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRP----------- 153
++L++DLE ++E++E ++++++T+ + F++P
Sbjct: 7 YYLIVDLEATCADDNSIPRRRMEMIEIGAVLLNSQTLQIESEYQTFIKPILHPVLTEFCK 66
Query: 154 --SKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK 211
+ +S+Q I K A F ++ F++W G +L
Sbjct: 67 SLTSISQQDIEK------------------APLFPAALKDFQSWFYPC-------GSYL- 100
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
F + G++D V D C++ + P + + +NLK F + +K GM G +
Sbjct: 101 ---FCSWGDYDRHQFVQD-CQMHGVGYP-FPGDHLNLKRAFSSEINSKKK--FGMAGALT 153
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
+ + G HH GIDD +NI R++Q ++
Sbjct: 154 ELGLELEGVHHRGIDDARNIARIVQTAFSE 183
>gi|154340904|ref|XP_001566405.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063728|emb|CAM39913.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 405
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 112 QDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDL---FHRFVRPSKMSEQ 159
Q D+ +V+D+E E ++E P ++ID +T VD FH +V+P +
Sbjct: 71 QLFDYIIVVDVEATCEQHNRNYPHEVIEIPGVLIDVRT-GQVDRARSFHTYVKPWR---- 125
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + + G+ + D A E +Q FE W + RG + FA
Sbjct: 126 --NPRLTPFCTQLTGITQEMVDAAPSITEAVQLFEKWYRE----TIPRGA---KTIFAAD 176
Query: 219 GNWDLKTKVPDQCKV-SQIKLPPYFMEWINLKDVF---YNFYKPRKSEATGMMGMMKNRQ 274
G WD K + + + + P F E+++++ F N P K +A M++
Sbjct: 177 GPWDFKNFIHEHHILRDHVGFPSIFYEYLDIRTTFAHRLNHGVPIKLDA-----MLRKMH 231
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ G H G DD NI R+ M+ G
Sbjct: 232 LRFDGRPHSGFDDAYNIARLTVAMMKVG 259
>gi|374705669|ref|ZP_09712539.1| exonuclease [Pseudomonas sp. S9]
Length = 182
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 28/196 (14%)
Query: 114 LDFFLVLDLEGKIEILEFPVL----------MIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ +LV+DLE E +P+ M++A+ +D F RFVRP + H+ +
Sbjct: 1 MGHWLVIDLEATTEEGGWPIEEMEIIEIGASMVNAQGHE-IDHFQRFVRP--LRRPHLTR 57
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ D D+A P E+ FE WL QH H + +A+ G +D
Sbjct: 58 FCRDLTHISQTDV---DSAGPLSEIWPHFERWLSQH---------HPRLIGWASWGEYD- 104
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ ++ ++ Q+ + +NLK F K + G+ ++ + G H
Sbjct: 105 RRQLEQDWRLQQLSSHLSTLSHLNLKKSFAQARK--LQQPVGLHTALQLSGINFSGQQHR 162
Query: 284 GIDDTKNITRVLQRML 299
+ D +N R+L +L
Sbjct: 163 ALSDARNTARLLPMVL 178
>gi|419956272|ref|ZP_14472376.1| exonuclease [Pseudomonas stutzeri TS44]
gi|387966927|gb|EIK51248.1| exonuclease [Pseudomonas stutzeri TS44]
Length = 217
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 125 KIEILEFPVLMIDAK-TMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
++E +E + ++D + VD F +FVRP + + ++ G G D DTA
Sbjct: 54 EMETIEIGIALLDVQLEYRIVDHFGQFVRP--LLRPTLTEFCTGLTGISQSD---VDTAK 108
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVS-QIKLPPYF 242
F EV Q WL R + + + + G++D D + + L P
Sbjct: 109 RFAEVQDQLGDWL---------RPRNTEGWRWCSWGDYDRNQLKEDAFRAGVDVLLDPAR 159
Query: 243 MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
INLK F+ + R A G+ ++N + G HH IDD +N+ R+ Q +L+
Sbjct: 160 H--INLKKCFWKIFACR---ALGLKCAVENIGLSWEGEHHRAIDDARNLARLAQLLLS 212
>gi|398867001|ref|ZP_10622473.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM78]
gi|398238581|gb|EJN24307.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM78]
Length = 180
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 46/203 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPITEMEIIEIGATLVDHKGRE-LDFFQRFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QHH +G + + G++
Sbjct: 63 THITQANI----------DAAQPMGEVWAAFERWLGQHHPRLEG---------WVSWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + D ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQDWQRLALDSALSQVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRMLA 300
G H ++D +N R+L +LA
Sbjct: 157 SGQQHRALEDARNTARLLPLVLA 179
>gi|431926089|ref|YP_007239123.1| exonuclease [Pseudomonas stutzeri RCH2]
gi|431824376|gb|AGA85493.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas stutzeri RCH2]
Length = 217
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 125 KIEILEFPVLMIDAK-TMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
++E +E + ++D + VD F +FVRP + + ++ G G D DTA
Sbjct: 54 EMETIEIGIALLDVQLEYRIVDHFGQFVRP--LLRPTLTEFCTGLTGISQSD---VDTAK 108
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVS-QIKLPPYF 242
F EV Q WL R + + + + G++D D + + L P
Sbjct: 109 RFAEVQDQLGDWL---------RPRNTEGWRWCSWGDYDRNQLKEDAFRAGVDVLLDPAR 159
Query: 243 MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
INLK F+ + R A G+ ++N + G HH IDD +N+ R+ Q +L+
Sbjct: 160 H--INLKKCFWKIFACR---ALGLKCAVENIGLSWEGEHHRAIDDARNLARLAQLLLS 212
>gi|426408384|ref|YP_007028483.1| exonuclease [Pseudomonas sp. UW4]
gi|426266601|gb|AFY18678.1| exonuclease [Pseudomonas sp. UW4]
Length = 180
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 46/203 (22%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRE-LDQFQRFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL HH +G +A+ G++
Sbjct: 63 THITQANI----------DAAQPLGEVWPAFERWLGNHHTRLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCK---VSQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + D + VS + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQDWQRLGLVSMLANVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRMLA 300
G H ++D +N R+L +LA
Sbjct: 157 TGQQHRALEDARNTARLLPLVLA 179
>gi|268578589|ref|XP_002644277.1| C. briggsae CBR-CRN-4 protein [Caenorhabditis briggsae]
Length = 298
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 88/210 (41%), Gaps = 29/210 (13%)
Query: 114 LDFFLVLDLE----GK-----IEILEFPVLMID--AKTMAFVDLFHRFVRPSKMSEQHIN 162
D L+LD E GK EI++F V+ +D AKTM F++FVRP IN
Sbjct: 8 FDHLLILDFETTSGGKNRDYPTEIIQFSVVPLDVKAKTMLEGIAFNKFVRPV------IN 61
Query: 163 KYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + G+ + ++A F V +QF WL + G + A +
Sbjct: 62 PTLSEHCAELTGIKQESLNSADTFLVVYKQFLEWL-------QKNGFQERHFAIVSDSRQ 114
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE----ATGMMGMMKNRQVPM 277
D+ Q ++ + +P F +WIN+K F + + + E T + M + +
Sbjct: 115 DMWRIAQYQFRLVRETMPSMFRQWINIKRTFDDGLEDGQKEKLVGTTNIEKMSNYLGIEL 174
Query: 278 FGSHHLGIDDTKNITRVLQRMLADGARVQI 307
G H + D NI + ++L G V I
Sbjct: 175 SGKAHDALSDCLNIAAITHKILEIGCPVTI 204
>gi|444516848|gb|ELV11300.1| Tankyrase-1 [Tupaia chinensis]
Length = 1316
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 49/153 (32%)
Query: 115 DFFLVLDLEGKIE----------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
D+ V+D E E I+EFP+++++ T+
Sbjct: 45 DYICVIDFEATCEEGNPPEFTHEIIEFPIVLLNTHTLE---------------------- 82
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+D+V D A F +V+++ W+ L K + + T G+WD+
Sbjct: 83 ---------IDQV--DRADTFPQVLKKVTDWMKLKELGTK------YKYSILTDGSWDMS 125
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK 257
+ QC++S+++ P + +WIN++ + NFYK
Sbjct: 126 KFLNMQCQLSRLRYPSFAKKWINIRKSYGNFYK 158
>gi|307150076|ref|YP_003885460.1| exonuclease RNase T and DNA polymerase III [Cyanothece sp. PCC
7822]
gi|306980304|gb|ADN12185.1| Exonuclease RNase T and DNA polymerase III [Cyanothece sp. PCC
7822]
Length = 199
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 85/207 (41%), Gaps = 43/207 (20%)
Query: 115 DFFLVLDLEG-------------------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSK 155
D++LVLDLE ++EI+E +M++ + + V F F++P +
Sbjct: 8 DYYLVLDLEATCCELLRSTEGERGTIKRHEMEIIEIGAVMVEKQDLTIVAEFQTFIKPVR 67
Query: 156 MSEQHINKYIEGKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRA 213
I + K + + D A + E + WL + A
Sbjct: 68 YP-------ILTNFCKSLTSITQTQVDQAPSYPEAAILLKKWL-----------SNYSNA 109
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR 273
F + G++D + D K Q+ P + +NLK +F + + GM ++
Sbjct: 110 VFGSWGDYDRHQFLQD-SKFHQVPFPIAYPH-VNLKQLFSE--RQGLPKRYGMKEALELA 165
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLA 300
+ + G+HH GIDD +NI ++L +L
Sbjct: 166 GLTLSGTHHRGIDDARNIAKLLPYILG 192
>gi|442610054|ref|ZP_21024779.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
gi|441748273|emb|CCQ10841.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudoalteromonas luteoviolacea B = ATCC 29581]
Length = 151
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 24/135 (17%)
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
D A + E I F+ WL G+ F + G +D K + C + P
Sbjct: 34 DHAPYYPEAINTFQKWL-----------GNYDNYLFCSWGEYD-KQQFEQDCAFHNVPYP 81
Query: 240 ---PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQ 296
P+ +N+K F K RK + GM G +K ++P GSHH GIDD N+ +++
Sbjct: 82 IPAPH----LNIKKEFSKIQKVRKRQ--GMAGALKLAKIPHTGSHHRGIDDANNMIKLMP 135
Query: 297 RMLADGARVQITARR 311
++ RV I +++
Sbjct: 136 YVM---GRVFIDSQK 147
>gi|296137636|ref|YP_003644877.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
gi|295797758|gb|ADG32547.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
Length = 179
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 212 RAAFATCGNW---DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMG 268
+A AT G+W D K D C+ I+ P E +NLK F K RK + GM
Sbjct: 93 QAPGATWGSWGQFDAKQLARD-CERHGIESPLAAFEHVNLK---RRFAKGRKIKEVGMAR 148
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVL 295
++ +P+ GSHH G+DD +NI ++L
Sbjct: 149 ALQMVGLPLDGSHHRGLDDARNIAKLL 175
>gi|118356253|ref|XP_001011385.1| exonuclease family protein [Tetrahymena thermophila]
gi|89293152|gb|EAR91140.1| exonuclease family protein [Tetrahymena thermophila SB210]
Length = 475
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 113 DLDFFLVLDLEGK-----IEILEFPVLMIDAKTMAFVDLFHRFVRP-SKMSEQHINKYIE 166
D D+ +D E EI+EFP+ ++D K + +D F +V+P SK+++ N
Sbjct: 249 DYDYLFFIDYECNQSYLGSEIIEFPIQVVDVKQLKIIDTFSSYVQPCSKITKLITN---- 304
Query: 167 GKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTK 226
K ++V + A ++V+QQ +L EK + R A D
Sbjct: 305 --LTKIDDNKVQN--APKIQQVLQQVRIFL------EKYLKNNFDRCAVVYDNKSDFLFI 354
Query: 227 VPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEAT------GMMGMMKNRQVPMFGS 280
V + K + + LP + ++I+L F P ++E + GM+ + G
Sbjct: 355 VEESIKKNFL-LPAFLQQYIDLGTCF-----PIRNEQNINEQRISLKGMLDTLGMKFQGQ 408
Query: 281 HHLGIDDTKNITRVLQRMLADG 302
H G DD KN V +L G
Sbjct: 409 KHCGADDCKNQALVAIELLKRG 430
>gi|163753213|ref|ZP_02160337.1| hypothetical protein KAOT1_13672 [Kordia algicida OT-1]
gi|161326945|gb|EDP98270.1| hypothetical protein KAOT1_13672 [Kordia algicida OT-1]
Length = 183
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR 273
+A+ G +D + KV ++C+ Q+ P + + IN+K+ F + R+ GM +K
Sbjct: 99 TWASYGAYD-RNKVMEECRKKQVDFP-FGDQHINVKEEFKRCNRMRR--GIGMARALKQL 154
Query: 274 QVPMFGSHHLGIDDTKNITRVL 295
++P+ G HH G+DD N ++L
Sbjct: 155 RIPLEGRHHRGVDDANNTAKIL 176
>gi|409427189|ref|ZP_11261714.1| exonuclease [Pseudomonas sp. HYS]
Length = 183
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 87/202 (43%), Gaps = 54/202 (26%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-------- 158
+LV+DLE +EI+E ++D K V F RFVRP + +
Sbjct: 4 WLVIDLEATTDDGGWPVTDMEIIEIGAALVDRKGRE-VGHFQRFVRPRRRPQLTPFCREL 62
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
HI++ DTA F +V QFE WL +HH GHL+ + +
Sbjct: 63 THISQANV-------------DTAATFAQVWAQFERWL-EHH------AGHLE--GWVSW 100
Query: 219 GNWDLKTKVPD--QCKVSQI--KLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNR 273
G++D K + + Q +V + +LP INLK F K R+ G+ G ++
Sbjct: 101 GDYDRKQLLQEWQQYQVHSLLAELPH-----INLKQ---RFAKARQLQRPLGLNGALQLA 152
Query: 274 QVPMFGSHHLGIDDTKNITRVL 295
+ G H ++D +N R+L
Sbjct: 153 GLQFSGRQHRALEDARNTARLL 174
>gi|146283781|ref|YP_001173934.1| exonuclease [Pseudomonas stutzeri A1501]
gi|145571986|gb|ABP81092.1| exonuclease [Pseudomonas stutzeri A1501]
Length = 217
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 125 KIEILEFPVLMIDAK-TMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
++E +E + ++D + VD F +FVRP + + ++ G G D DTA
Sbjct: 54 EMETIEIGIGLLDVQLEYRIVDHFGQFVRP--LLRPTLTEFCTGLTGISQSD---VDTAK 108
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVS-QIKLPPYF 242
F EV Q WL R + + + + G++D D + + L P
Sbjct: 109 RFAEVQDQLGEWL---------RPRNTEGWRWCSWGDYDRNQLKEDAFRAGVDVLLDPAR 159
Query: 243 MEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLA 300
INLK F+ + R A G+ +++ + G+HH IDD +N+ R+ Q +L+
Sbjct: 160 H--INLKKCFWKIFACR---ALGLKCAVESMGLLWEGAHHRAIDDARNLARLAQLLLS 212
>gi|254417569|ref|ZP_05031307.1| exonuclease superfamily [Coleofasciculus chthonoplastes PCC 7420]
gi|196175667|gb|EDX70693.1| exonuclease superfamily [Coleofasciculus chthonoplastes PCC 7420]
Length = 191
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 33/205 (16%)
Query: 111 SQDLDFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
S+ +D LV+D+E + EI+E V ++D + + V V+P + +
Sbjct: 2 SRKIDQILVIDVEATCWQGKPPPGQESEIIEIGVCLLDCHSHSAVKTESMLVKPERST-- 59
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
++++ + ++V D + F + ++ + + H + +A+ G
Sbjct: 60 -VSEFCT-ELTTLTQEQV--DQGMSFAQACERLQKRYLSH------------QRVWASYG 103
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
+D K + QC+ ++ P + IN+K F Y +K GM+ + ++ + G
Sbjct: 104 EYD-KNQFQKQCQSFGVEYP-FDSRHINVKTWFALAYSLQKE--VGMLKALFLLKLSLQG 159
Query: 280 SHHLGIDDTKNITRVLQRMLADGAR 304
+HH G+DD NI R+L ++L + R
Sbjct: 160 THHRGVDDAANIGRILSQLLWNQDR 184
>gi|291002083|ref|XP_002683608.1| exonuclease family protein [Naegleria gruberi]
gi|284097237|gb|EFC50864.1| exonuclease family protein [Naegleria gruberi]
Length = 366
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 77/208 (37%), Gaps = 26/208 (12%)
Query: 108 HKCSQDLDFFLVLDLEGKI-------------EILEFPVLMIDAKTMAFVDLFHRFVRPS 154
H D+ +++D E E++EFP ++ D +M + +V+P+
Sbjct: 126 HNGRHRYDYLVIIDFEATCDNGVNPVITRDNQEMIEFPFVVFDLASMEVIHKERYYVKPT 185
Query: 155 KMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAA 214
+ + + G D + + IQ F H + K K
Sbjct: 186 WSDK--LTPFCTQLTGI--TDEILEKEGISLSNAIQNF-------HNYVKKTFTDGKTFC 234
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
T WD+K + + I YF + +L+ + Y + G+ M+
Sbjct: 235 ILTDSEWDIKGLLIKEATTKGISFDSYFRTFYDLRKEYSKCYP--YAFVRGLKSMVDQSG 292
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADG 302
+ G HH G+ D I+ +++RM+ DG
Sbjct: 293 LSFVGQHHSGLCDCLTISEIVKRMIYDG 320
>gi|386011207|ref|YP_005929484.1| Exonuclease [Pseudomonas putida BIRD-1]
gi|313497913|gb|ADR59279.1| Exonuclease [Pseudomonas putida BIRD-1]
Length = 183
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 34/195 (17%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKY 164
+ +LV+DLE G + E V+ I A + VD F RFV+P + + + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVTEMEVIEIGASLVTREGREVDHFQRFVKPRRRPQ--LTPF 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD-- 222
D D+A PF+EV FE WL H G L+ A+ + G++D
Sbjct: 59 CRELTHISQADV---DSAAPFREVWASFERWLGHHR-------GQLQ--AWVSWGDYDRQ 106
Query: 223 -LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGS 280
L + S ++ P+ INLK F K R TG+ G ++ + G
Sbjct: 107 QLHQEWQQHSLDSLLRTLPH----INLKQ---RFAKARHLQRPTGLNGALQLAGMHFCGQ 159
Query: 281 HHLGIDDTKNITRVL 295
H ++D +N R+L
Sbjct: 160 QHRALEDARNTARLL 174
>gi|104780960|ref|YP_607458.1| exonuclease [Pseudomonas entomophila L48]
gi|95109947|emb|CAK14652.1| putative exonuclease [Pseudomonas entomophila L48]
Length = 183
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 28/197 (14%)
Query: 117 FLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKYIEG 167
+LV+DLE G + E ++ I A + VD F RFVRP + + + +
Sbjct: 4 WLVIDLEATTDDGGWPVTEMEIIEIGASLVTREGREVDHFQRFVRPRRRPQ--LTPFCRE 61
Query: 168 KYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV 227
D D A PF EV QFE WL+ H + A+ + G++D K ++
Sbjct: 62 LTHISQADV---DNATPFSEVWGQFERWLVNH---------QAQLQAWVSWGDYDRK-QL 108
Query: 228 PDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGSHHLGID 286
+ +V + + INLK F K R G+ ++ + G H ++
Sbjct: 109 LQEWQVHHVDSLLLKLPHINLKQ---RFAKARHLQRPAGLNSALQLAGLQFSGQQHRALE 165
Query: 287 DTKNITRVLQRMLADGA 303
D +N R+L L G
Sbjct: 166 DARNTARLLPLSLPVGG 182
>gi|389681036|ref|ZP_10172381.1| exonuclease family protein [Pseudomonas chlororaphis O6]
gi|388554572|gb|EIM17820.1| exonuclease family protein [Pseudomonas chlororaphis O6]
Length = 180
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 87/194 (44%), Gaps = 30/194 (15%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIE 166
+LV+DLE +EI+E +++ + +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTDMEIIEIGATLVNREGRE-LDHFQRFVRP--LRRPMLTPFCR 60
Query: 167 GKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTK 226
+ + ++ D A P EV FE WL QH H + +A+ G++D K +
Sbjct: 61 -ELTRISQAQI--DGAQPLSEVWPLFERWLGQH---------HARLEGWASWGDYDRK-Q 107
Query: 227 VPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFGSHHLGI 285
+ + + SQ+ + +NLK F K R+ E G+ G ++ + G H +
Sbjct: 108 LLQEWQRSQLHSALAQLPHMNLKQ---RFAKARRLERPLGLNGALQLAGLQFTGQQHRAL 164
Query: 286 DDTKNITRVLQRML 299
+D +N R+L +L
Sbjct: 165 EDARNTARLLPLIL 178
>gi|325275518|ref|ZP_08141430.1| exonuclease [Pseudomonas sp. TJI-51]
gi|324099350|gb|EGB97284.1| exonuclease [Pseudomonas sp. TJI-51]
Length = 183
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 84/200 (42%), Gaps = 29/200 (14%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKY 164
+ +LV+DLE G + E V+ I A + VD F RFVRP + + + +
Sbjct: 1 MGHWLVIDLEATTDEGGWPVTEMEVIEIGASLVTREGREVDHFQRFVRPRRRPQ--LTPF 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
D D A PF+EV FE WL QH + A+ + G++D +
Sbjct: 59 CRELTHISQADV---DAAAPFREVWASFEHWLGQH---------REQLQAWVSWGDYD-R 105
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGSHHL 283
++ + + + + INLK F K R G+ G ++ + G H
Sbjct: 106 QQLHQEWHLHGVDSLLRTLAHINLKQ---RFAKARHLQRPAGLNGALQLAGMHFCGQQHR 162
Query: 284 GIDDTKNITRVLQRML-ADG 302
++D +N R+L L ADG
Sbjct: 163 ALEDARNTARLLPLSLPADG 182
>gi|242078555|ref|XP_002444046.1| hypothetical protein SORBIDRAFT_07g006350 [Sorghum bicolor]
gi|241940396|gb|EES13541.1| hypothetical protein SORBIDRAFT_07g006350 [Sorghum bicolor]
Length = 122
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 114 LDFFLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKY 164
DFF+V+D E EI+EF +++D T + F +VRP +H
Sbjct: 2 FDFFVVIDFEATCQEGSVIYPQEIIEFTSVLVDGATGRTLSTFRTYVRP-----RHHPCL 56
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ G+ + D + E ++ + WL +H G L + A T G+WD +
Sbjct: 57 TDFYRDLTGITQDDVDAGVSLAEALEMHDRWLEEH-------GAKLGKLAVVTWGDWDCR 109
Query: 225 TKVPDQCK 232
T +C+
Sbjct: 110 TMPEGECR 117
>gi|2920819|gb|AAC04618.1| similar to C. elegans hypothetical protein; similar to AF038615
(PID:g2736329), partial [Homo sapiens]
Length = 89
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKF-----GVDRVWHDT 181
EI+EFP+L ++ +TM FH +V+P + + F G+ + D
Sbjct: 1 EIIEFPILKLNGRTMEIESTFHMYVQP----------VVHPQLTPFCTELTGIIQAMVDG 50
Query: 182 ALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
++V+++ + W+ + L + ++ F TCG+WDLK
Sbjct: 51 QPSLQQVLERVDEWMAKEGLLDPN-----VKSIFVTCGDWDLK 88
>gi|366165230|ref|ZP_09464985.1| 3-5 exonuclease eri-1 [Acetivibrio cellulolyticus CD2]
Length = 182
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 37/193 (19%)
Query: 117 FLVLDLEGKI---------EILEFPVLMIDAKTMAFVDLFHRFVRPS---KMSEQHINKY 164
+++ DLE EI+E + ++ + + VD F +F++P+ +S+ I
Sbjct: 3 YIIFDLEATCWENDKSKTSEIIEIGAVKLNDR-LEVVDTFSKFIKPAIYPVLSDFCIRLT 61
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+++ DTA FK V+ +FE W+ A + G +D K
Sbjct: 62 --------SIEQKDVDTADIFKNVMVEFENWITSSD----------TEVALCSWGFYD-K 102
Query: 225 TKVPDQCKVSQI--KLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
++ +C+V ++ + I++K + F + + GM + +P+ G+HH
Sbjct: 103 KQIYKECEVKNYSGRIHSLLDKHISIK---HQFAEIKGISPCGMSRALDLLGLPLEGTHH 159
Query: 283 LGIDDTKNITRVL 295
GIDD KNIT++
Sbjct: 160 RGIDDAKNITKIF 172
>gi|26990938|ref|NP_746363.1| exonuclease [Pseudomonas putida KT2440]
gi|24985960|gb|AAN69827.1|AE016622_4 exonuclease [Pseudomonas putida KT2440]
Length = 183
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 83/195 (42%), Gaps = 34/195 (17%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKY 164
+ +LV+DLE G + E V+ I A + VD F RFV+P + + + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVTEMEVIEIGASLVTREGREVDHFQRFVKPRRRPQ--LTPF 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD-- 222
D D+A PF+EV FE WL H G L+ A+ + G++D
Sbjct: 59 CRELTHISQADV---DSAAPFREVWASFERWLGHHR-------GQLQ--AWVSWGDYDRQ 106
Query: 223 -LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGS 280
L + S ++ P+ INLK F K R TG+ G ++ + G
Sbjct: 107 QLHQEWQQYSLDSLLRTLPH----INLKQ---RFAKARHLQRPTGLNGALQLAGMHFCGQ 159
Query: 281 HHLGIDDTKNITRVL 295
H ++D +N R+L
Sbjct: 160 QHRALEDARNTARLL 174
>gi|359463339|ref|ZP_09251902.1| exonuclease [Acaryochloris sp. CCMEE 5410]
Length = 183
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 57/210 (27%)
Query: 116 FFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRP----------- 153
++L++DLE ++E++E ++++++T+ + F++P
Sbjct: 7 YYLIVDLEATCADDNSIPRRRMEMIEIGAVLLNSQTLQIESEYQTFIKPILHPVLTEFCK 66
Query: 154 --SKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLK 211
+ +S+Q I + A F ++ F++W +
Sbjct: 67 SLTSISQQDIEE------------------APLFPVALKDFQSWFYPCGSYR-------- 100
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
F + G++D V D C++ + P + + +NLK F +K GM G +
Sbjct: 101 ---FCSWGDYDRHQFVQD-CQLHGVGYP-FPGDHLNLKQAFSIEINSKKK--FGMAGALA 153
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
+ + G HH GIDD +NI R++Q ++
Sbjct: 154 KLGLELEGVHHRGIDDARNIARIVQTAFSE 183
>gi|425900662|ref|ZP_18877253.1| exonuclease family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397883470|gb|EJK99956.1| exonuclease family protein [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 180
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 40/199 (20%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E +++ + +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTDMEIIEIGATLVNREGRE-LDHFQRFVRPLRRPMLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + D A P EV FE WL QH H + +A+ G++
Sbjct: 63 THITQAQI----------DGAQPLSEVWPLFERWLGQH---------HTRLEGWASWGDY 103
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFGS 280
D K ++ + + SQ+ + +NLK F K R+ E G+ G ++ + G
Sbjct: 104 DRK-QLLQEWQRSQLHSALAQLPHMNLKQ---RFAKARRLERPLGLNGALQLAGLQFTGQ 159
Query: 281 HHLGIDDTKNITRVLQRML 299
H ++D +N R+L +L
Sbjct: 160 QHRALEDARNTARLLPLIL 178
>gi|398911049|ref|ZP_10655333.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM49]
gi|398184779|gb|EJM72213.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM49]
Length = 180
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRE-LDYFQRFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH H + + + G++
Sbjct: 63 THITQANI----------DAAQPLGEVWPAFERWLGQH---------HTRLEGWVSWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLGLASALANVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLVL 178
>gi|429213820|ref|ZP_19204984.1| putative exonuclease [Pseudomonas sp. M1]
gi|428155415|gb|EKX01964.1| putative exonuclease [Pseudomonas sp. M1]
Length = 179
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 33/192 (17%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIE 166
+LV+DLE ++EI+E ++ A +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTEEGGWPVEEMEIIEIGASLVAAADGRELDHFQRFVRPQRRPL--LTSFCR 61
Query: 167 GKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD---L 223
D D A P EV QFE WL QH + A +A+ G++D L
Sbjct: 62 ELTHISQADV---DGAAPLTEVWPQFERWLAQH---------SPRLAGWASWGDYDRRQL 109
Query: 224 KTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHL 283
+ + Q S + P+ +NLK F + ++ G+ ++ + G H
Sbjct: 110 ELEWRQQHIDSHLSQVPH----LNLKQRFAQARQLKRP--VGLNTALQLAGLHFQGQQHR 163
Query: 284 GIDDTKNITRVL 295
++D +N R+L
Sbjct: 164 ALEDARNTARLL 175
>gi|399009452|ref|ZP_10711886.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
gi|398112186|gb|EJM02052.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM17]
Length = 180
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 40/199 (20%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E +++ + +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPLTDMEIIEIGATLVNREGRE-LDHFQRFVRPLRRPMLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + D A P EV FE WL QH H + +A+ G++
Sbjct: 63 THITQAQI----------DGAQPLSEVWPLFERWLGQH---------HTRLEGWASWGDY 103
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFGS 280
D K ++ + + SQ+ + +NLK F K R+ E G+ G ++ + G
Sbjct: 104 DRK-QLLQEWQRSQLHSALAQLPHMNLKQ---RFAKARRLERPLGLNGALQLAGLQFTGQ 159
Query: 281 HHLGIDDTKNITRVLQRML 299
H ++D +N R+L +L
Sbjct: 160 QHRALEDARNTARLLPLIL 178
>gi|399031628|ref|ZP_10731531.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Flavobacterium sp. CF136]
gi|398070046|gb|EJL61365.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Flavobacterium sp. CF136]
Length = 181
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFM--EWINLKDVFYNFYKPRKSEATGMMGMMK 271
+A+ G +DL + Q K I PY M E IN+K F + KS TGM G +
Sbjct: 98 TWASYGQYDLNM-LKKQSKSFGI---PYPMGDEHINVKVTFAEKFGLLKS--TGMNGALH 151
Query: 272 NRQVPMFGSHHLGIDDTKNITRVL 295
+P+ G+HH GIDD KNI ++L
Sbjct: 152 LLDIPLEGTHHRGIDDAKNIAKIL 175
>gi|402699837|ref|ZP_10847816.1| exonuclease [Pseudomonas fragi A22]
Length = 180
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 44/201 (21%)
Query: 117 FLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSE-----QHIN 162
+LV+DLE G I E V+ I A + VD F RF+RP + +H+
Sbjct: 4 WLVIDLEATTDDGGWPIEEMEVIEIGASVVTRAGREVDHFQRFIRPQRRPLLTPFCRHLT 63
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ + D P +V +QFE WL QH K +A+ G++D
Sbjct: 64 RITQANI----------DAGAPLPQVWEQFERWLGQH---------LPKLEGWASWGDYD 104
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK----PRKSEATGMMGMMKNRQVPMF 278
K ++ + + ++ + +NLK F + P + A + GM N
Sbjct: 105 RK-QLEQEWQQKKLDSALARLPHMNLKQQFAQARQLKSAPGLNSALQLAGMQFN------ 157
Query: 279 GSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 158 GQQHRALEDARNTARLLPLIL 178
>gi|170722729|ref|YP_001750417.1| exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
gi|169760732|gb|ACA74048.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
Length = 181
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 44/200 (22%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSE------ 158
+ +LV+DLE G + E ++ I A + VD F RFVRP + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVTEMEIIEIGASLVTREGREVDHFQRFVRPRRRPQLTPFCR 60
Query: 159 --QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
HI++ D+A PF EV +FE WL H G L+ A+
Sbjct: 61 ELTHISQANV-------------DSAAPFPEVWARFERWLGHHR-------GQLQ--AWV 98
Query: 217 TCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQV 275
+ G++D + ++ + + ++ + INLK F K R TG+ G ++ +
Sbjct: 99 SWGDYD-RQQLLQEWQQHELDSLLRNLPHINLKQ---RFAKARHLQRPTGLNGALQLAGM 154
Query: 276 PMFGSHHLGIDDTKNITRVL 295
G H ++D +N R+L
Sbjct: 155 HFCGQQHRALEDARNTARLL 174
>gi|148546859|ref|YP_001266961.1| exonuclease [Pseudomonas putida F1]
gi|397693483|ref|YP_006531363.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
DOT-T1E]
gi|421525362|ref|ZP_15971977.1| exonuclease [Pseudomonas putida LS46]
gi|148510917|gb|ABQ77777.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas putida F1]
gi|397330213|gb|AFO46572.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
DOT-T1E]
gi|402750835|gb|EJX11354.1| exonuclease [Pseudomonas putida LS46]
Length = 183
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKY 164
+ +LV+DLE G + E ++ I A + VD F RFV+P + + + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVTEMEIIEIGASLVTREGREVDHFQRFVKPRRRPQ--LTPF 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD-- 222
D D A PF+EV FE WL H G L+ A+ + G++D
Sbjct: 59 CRELTHISQADV---DNAAPFREVWASFERWLGHHR-------GQLQ--AWVSWGDYDRQ 106
Query: 223 -LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGS 280
L + S ++ P+ INLK F K R TG+ G ++ + G
Sbjct: 107 QLHQEWQQHGLDSLLRTLPH----INLKQ---RFAKARHLQRPTGLNGALQLAGMHFCGQ 159
Query: 281 HHLGIDDTKNITRVL 295
H ++D +N R+L
Sbjct: 160 QHRALEDARNTARLL 174
>gi|269126134|ref|YP_003299504.1| Exonuclease RNase T and DNA polymerase III [Thermomonospora curvata
DSM 43183]
gi|268311092|gb|ACY97466.1| Exonuclease RNase T and DNA polymerase III [Thermomonospora curvata
DSM 43183]
Length = 196
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
+A+ G++D K + QC Q P + IN K VF Y R+ GM ++
Sbjct: 102 WASWGDYDRK-QFERQCAAGQADYP-FGARHINAKAVFTEVYGLRRR--PGMAQALQIAG 157
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLADGA 303
+P+ G HH G+DD NI ++ + A GA
Sbjct: 158 LPLEGRHHRGVDDAWNIAALVLDIAARGA 186
>gi|398935809|ref|ZP_10666681.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM41(2012)]
gi|398169104|gb|EJM57098.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM41(2012)]
Length = 180
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D K +D F FVRP++ + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGRE-LDSFQCFVRPTRRPLLTPFCRQL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH H + + + G++
Sbjct: 63 THITQANI----------DAAQPLNEVWASFEHWLGQH---------HSRLEGWVSWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K V + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLVQEWERLQLDSALSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 NGQQHRALEDARNTARLLPLVL 178
>gi|167034808|ref|YP_001670039.1| exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
gi|166861296|gb|ABY99703.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
Length = 183
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 34/195 (17%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKY 164
+ +LV+DLE G + E ++ I A + VD F RFVRP + + + +
Sbjct: 1 MGHWLVIDLEATTDEGGWPVTEMEIIEIGASLVTREGREVDHFQRFVRPRRRPQ--LTPF 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD-- 222
D D+A PF+EV E WL H G L+ A+ + G++D
Sbjct: 59 CRELTHISQADV---DSAAPFREVWANVERWLGHHR-------GQLQ--AWVSWGDYDRQ 106
Query: 223 -LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGS 280
L + S ++ P+ INLK F K R TG+ G ++ + G
Sbjct: 107 QLHQEWQQHGLDSLLRTLPH----INLKQ---RFAKARHLQRPTGLNGALQLAGMHFCGQ 159
Query: 281 HHLGIDDTKNITRVL 295
H ++D +N R+L
Sbjct: 160 QHRALEDARNTARLL 174
>gi|398930885|ref|ZP_10664851.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
gi|398164575|gb|EJM52708.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM48]
Length = 180
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRE-LDHFQRFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH H + + + G++
Sbjct: 63 THITQANI----------DAAQPLGEVWPAFERWLGQH---------HTRLEGWVSWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLGLTSALANVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLVL 178
>gi|395448144|ref|YP_006388397.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
ND6]
gi|388562141|gb|AFK71282.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
ND6]
Length = 183
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 28/192 (14%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSEQHINKY 164
+ +LV+DLE G + E ++ I A + VD F RFV+P + + + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVTEMEIIEIGASLVTREGREVDHFQRFVKPRRRPQ--LTPF 58
Query: 165 IEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
D D A PF+EV FE WL H G L+ A+ + G++D +
Sbjct: 59 CRELTHISQADV---DNAAPFREVWASFERWLGHHR-------GQLQ--AWVSWGDYD-R 105
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFGSHHL 283
++ + + + + INLK F K R TG+ G ++ + G H
Sbjct: 106 QQLHQEWQQHDLDSLLRTLPHINLKQ---RFAKARHLQRPTGLNGALQLAGMHFCGQQHR 162
Query: 284 GIDDTKNITRVL 295
++D +N R+L
Sbjct: 163 ALEDARNTARLL 174
>gi|428215737|ref|YP_007088881.1| exonuclease [Oscillatoria acuminata PCC 6304]
gi|428004118|gb|AFY84961.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Oscillatoria acuminata PCC 6304]
Length = 188
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 215 FATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQ 274
+A+ G +D K + +C+ ++ P + +N+K +F Y K GM G +++
Sbjct: 99 WASYGEFD-KRQFQVECEKKGVRYP-FSNRHLNVKTLFSVMYALEKE--VGMAGALEHLN 154
Query: 275 VPMFGSHHLGIDDTKNITRVLQRMLA 300
+P+ G+HH G DD NI R+L +++
Sbjct: 155 LPLEGTHHRGHDDAWNIARILSQLIT 180
>gi|158341366|ref|YP_001522531.1| exonuclease [Acaryochloris marina MBIC11017]
gi|158311607|gb|ABW33217.1| exonuclease [Acaryochloris marina MBIC11017]
Length = 194
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 35/199 (17%)
Query: 115 DFFLVLDLEG-----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
D++L++DLE + E +E +++++ + +D F F++P + K
Sbjct: 9 DYYLIVDLEATCCNTFSIPHKETETIEIGAVIVESVGLEIIDEFTVFIKPIRHP-----K 63
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ + + + A F + + F+ W Q+ + + F + G++D
Sbjct: 64 LTDFCTELTTIKQTDLEDAPTFPQAVGTFKRWFEQY-----------ENSVFCSWGDYD- 111
Query: 224 KTKVPDQCKVSQIKLPPYFM--EWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSH 281
K ++ + K +I PY M E NLK F + +K GM + + + G+H
Sbjct: 112 KNQLERESKYHKI---PYPMGEEHFNLKKQFSLALRTKKH--YGMAKALMTVGLSLDGTH 166
Query: 282 HLGIDDTKNITRVLQRMLA 300
H GIDD +N+ +++ ++
Sbjct: 167 HRGIDDARNLAKLMPFIIG 185
>gi|428181691|gb|EKX50554.1| hypothetical protein GUITHDRAFT_103781 [Guillardia theta CCMP2712]
Length = 656
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 50/214 (23%)
Query: 111 SQDLDFFLVLDLE---------GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHI 161
++ D+ +VLD E +EI+EFP +++ R P K+ +
Sbjct: 23 ARPFDYLVVLDFEWTCDNKKKLEPLEIIEFPSVLV------------RTSFPPKI----V 66
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+++ E D + ++ I+ WL QH L G F T +
Sbjct: 67 SEFQE-----------MVDAGVHLEDAIEMHRQWLEQHGLL-PAEGAASSTFTFVTWSDA 114
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNF-----------YKP--RKSEATGMMG 268
D+ + + +I P YF WINLK + YK +K G+
Sbjct: 115 DIMFALHSEFSRLKIARPSYFNNWINLKVSLPSLPHSLLSRQQLLYKSHFKKDAVGGLQA 174
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
++ + G H G+ D++N ++ +ML +G
Sbjct: 175 CVERLGISFQGRAHSGLVDSRNTAAIVMKMLNEG 208
>gi|398871585|ref|ZP_10626899.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM74]
gi|398206141|gb|EJM92914.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM74]
Length = 180
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTDMEIIEIGATLVDRKGRE-LDHFQRFVRPVRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH H + + + G++
Sbjct: 63 THITQANI----------DAAQPLGEVWPAFERWLGQH---------HTRLEGWVSWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLELASVLANVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLVL 178
>gi|398880744|ref|ZP_10635767.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM67]
gi|398884650|ref|ZP_10639578.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM60]
gi|398191514|gb|EJM78703.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM67]
gi|398193862|gb|EJM80954.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM60]
Length = 180
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D + D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVDRQGRE-QDHFQRFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ + D+A EV FE WL QHH +G +A+ G++
Sbjct: 63 TRITQANI----------DSAQALTEVWPVFERWLGQHHSRLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D + + + ++ SQ+ P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRRQLLQEWERLQLDSQLSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLIL 178
>gi|398989514|ref|ZP_10692753.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM24]
gi|399011217|ref|ZP_10713550.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM16]
gi|398118555|gb|EJM08286.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM16]
gi|398147409|gb|EJM36118.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM24]
Length = 180
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D + D F RFV+P++ + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ DTA P EV FE WL QH + +A+ G++
Sbjct: 63 THITQANI----------DTAQPLTEVWPAFERWLAQH---------QTRLEGWASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLQIDSGLSKVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 SGQQHRALEDARNTARLLPLVL 178
>gi|398845736|ref|ZP_10602756.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM84]
gi|398253249|gb|EJN38386.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM84]
Length = 181
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 83/197 (42%), Gaps = 38/197 (19%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSE-----Q 159
+ +LV+DLE G + E V+ I A + VD F RFVRP + + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVTEMEVIEIGASLVTREGREVDHFQRFVRPRRRPQLTPFCR 60
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
+ K + D+A F EV +FE WL H G L+ A+ + G
Sbjct: 61 QLTKISQANV----------DSAAAFPEVWARFERWLGHHR-------GQLQ--AWVSWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMF 278
++D + ++ + + ++ + INLK F K R TG+ G + +
Sbjct: 102 DYD-RQQLLQEWQQHELDSLLRNLPHINLKQ---RFAKARHLQRPTGLNGALHLAGMHFS 157
Query: 279 GSHHLGIDDTKNITRVL 295
G H ++D +N R+L
Sbjct: 158 GQQHRALEDARNTARLL 174
>gi|398894018|ref|ZP_10646448.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM55]
gi|398183150|gb|EJM70645.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM55]
Length = 180
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 83/202 (41%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE +EI+E ++D K +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPIKDMEIIEIGATLVDRKGRE-LDHFQRFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH H + + + G++
Sbjct: 63 THITQANI----------DAAQPLGEVWPAFERWLGQH---------HTRLEGWVSWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQQLGLASALANVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLVL 178
>gi|268578587|ref|XP_002644276.1| Hypothetical protein CBG14047 [Caenorhabditis briggsae]
Length = 292
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 20/188 (10%)
Query: 127 EILEFPVLMIDAKTMAFVD--LFHRFVRPSKMSEQHINKYIEGKYGKF-GVDRVWHDTAL 183
E+++F V+ D K ++ F++FVRP +N + +F G+ + + A
Sbjct: 24 EVIQFSVVPYDVKAKTILEGHAFNKFVRPV------VNPVLSKHCTEFTGIKQESLNAAD 77
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
F V +QF WL + G + A + D+ Q ++ Q +P F
Sbjct: 78 TFLVVYKQFLKWL-------QKNGFQERHFAIVSDSRQDMWRIAQYQFRLVQETMPSMFR 130
Query: 244 EWINLKDVFYN-FYKPRKSEATG---MMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRML 299
+WIN+K F + +K++ G M M+ + G H + D + + Q++L
Sbjct: 131 QWINIKRTFDDGLEDGQKNKLVGRSNMEKMLNYLGIEFSGRAHDALSDCLTLAAITQKIL 190
Query: 300 ADGARVQI 307
G V I
Sbjct: 191 EMGCPVTI 198
>gi|153875688|ref|ZP_02003377.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067847|gb|EDN66622.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 187
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMM 270
K+ A+A+ G +D K + +C+ I+ P + + IN+K +K GM+G +
Sbjct: 94 KQHAWASYGAYDRK-QFERECRTKGIEYP-FHQKHINVKQWIMETLNLKKR--VGMVGAL 149
Query: 271 KNRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
P+ G+HH G+DD NI ++L +L +
Sbjct: 150 NILDFPLEGTHHRGVDDAWNIAKILAWLLEN 180
>gi|443243600|ref|YP_007376825.1| exonuclease, RNase T and DNA polymerase III [Nonlabens dokdonensis
DSW-6]
gi|442800999|gb|AGC76804.1| exonuclease, RNase T and DNA polymerase III [Nonlabens dokdonensis
DSW-6]
Length = 182
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 42/197 (21%)
Query: 115 DFFLVLDLE-----GKI------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ---- 159
D +++DLE GK+ EI+E + +++ T ++P + +
Sbjct: 4 DQIIIIDLEATCWNGKVPTGQVNEIIEIGICVLNTNTSVITRQKGILIQPERSTVSTFCT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQF-EAWLIQHHLWEKGRGGHLKRAAFATC 218
+ + K GV FKE Q E + H+ W A+
Sbjct: 64 ELTTITQELLDKEGV---------SFKEACTQLREEYHAHHYTW-------------ASY 101
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
G +DL + QCK+ ++ P IN+K +F K K + GM G + P+
Sbjct: 102 GAYDLNM-MKKQCKMRGMEYP-LAQNHINVKTLFSEV-KGLKGKV-GMKGALGILNFPLE 157
Query: 279 GSHHLGIDDTKNITRVL 295
G+HH G+DD NI ++L
Sbjct: 158 GTHHRGVDDANNIAKIL 174
>gi|328863733|gb|EGG12832.1| hypothetical protein MELLADRAFT_114944 [Melampsora larici-populina
98AG31]
Length = 321
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 127 EILEFPVLMIDAK------TMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHD 180
EI+E+PV+++ + + VD + FV+P+ E I+++ G D D
Sbjct: 100 EIIEWPVILMQWRHCSGRWELYEVDRYRSFVKPTWRPE--ISEFCTQLTGITQQDT---D 154
Query: 181 TALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIK--- 237
A +++ F+ I+ H + H R+ + T G WDL+ +S++K
Sbjct: 155 NAPTLPAMLKDFQINFIERH---QLFTVH-NRSVWVTDGPWDLRDHWIKSIFLSKLKRYQ 210
Query: 238 LPPYFMEWINLKDVFY-------NFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKN 290
+P Y I++ D+ Y Y R + + +K + G H GIDD N
Sbjct: 211 IPSYLQSPIHMIDMRYLLQAFIPKVYCIRPPTSLSLNESLKIFGLEFEGQEHSGIDDAAN 270
Query: 291 ITRVLQRM 298
++R+L ++
Sbjct: 271 LSRLLSKL 278
>gi|332878806|ref|ZP_08446521.1| exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683157|gb|EGJ56039.1| exonuclease [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 183
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLP-PYFMEWINLKDVFYNFYK-PRKSEATGMMGMMK 271
+A+ GN+D K + QC + KLP P E IN+K++F + P++ GM +
Sbjct: 96 TWASYGNYD-KNMLQKQCALR--KLPYPMRNEHINVKELFQEVTQHPKR---LGMHQALN 149
Query: 272 NRQVPMFGSHHLGIDDTKNITRVL 295
++P+ G+HH G DD NI +++
Sbjct: 150 YLKIPLVGTHHRGKDDAYNIAKIM 173
>gi|228472478|ref|ZP_04057240.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
gingivalis ATCC 33624]
gi|228276163|gb|EEK14910.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
gingivalis ATCC 33624]
Length = 184
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLP-PYFMEWINLKDVFYNFYK-PRKSEATGMMGMMK 271
+A+ GN+D + + QC + KLP P E IN+K+ F + P++ GM +
Sbjct: 96 TWASYGNYD-RNMLQKQCALR--KLPYPMRNEHINVKERFQEVTQHPKR---LGMHQALN 149
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
++P+ G+HH G DD NI +++ +++ +
Sbjct: 150 YLKIPLVGTHHRGKDDAYNIAKIMYKLITN 179
>gi|152986809|ref|YP_001349107.1| hypothetical protein PSPA7_3753 [Pseudomonas aeruginosa PA7]
gi|452879067|ref|ZP_21956213.1| hypothetical protein G039_21500 [Pseudomonas aeruginosa VRFPA01]
gi|150961967|gb|ABR83992.1| hypothetical protein PSPA7_3753 [Pseudomonas aeruginosa PA7]
gi|452184333|gb|EME11351.1| hypothetical protein G039_21500 [Pseudomonas aeruginosa VRFPA01]
Length = 183
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 37/198 (18%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMS-EQHINKYI 165
+LV+DLE ++EI+E ++ A +D F RFVRP + H + +
Sbjct: 4 WLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPLRRPLLTHFCRDL 63
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD--- 222
+ + D A F V + FE WL QH + A +A+ G++D
Sbjct: 64 T------HISQASVDGAAQFDAVWEAFERWLAQH---------RPRLAGWASWGDYDRRQ 108
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSH 281
L+ + SQ+ P+ +NLK F + PR G+ ++ + G
Sbjct: 109 LEQEWRQHRLSSQLSEVPH----VNLKQRFGEVRQLPRP---VGLNAALQLAGMSFQGQQ 161
Query: 282 HLGIDDTKNITRVLQRML 299
H ++D +N R+L +L
Sbjct: 162 HRALEDARNTARLLPLVL 179
>gi|28869227|ref|NP_791846.1| exonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967497|ref|ZP_03395645.1| exonuclease [Pseudomonas syringae pv. tomato T1]
gi|301386461|ref|ZP_07234879.1| exonuclease, putative [Pseudomonas syringae pv. tomato Max13]
gi|302059344|ref|ZP_07250885.1| exonuclease, putative [Pseudomonas syringae pv. tomato K40]
gi|302131217|ref|ZP_07257207.1| exonuclease, putative [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422658314|ref|ZP_16720749.1| exonuclease, putative [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|28852468|gb|AAO55541.1| exonuclease, putative [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927798|gb|EEB61345.1| exonuclease [Pseudomonas syringae pv. tomato T1]
gi|331016942|gb|EGH96998.1| exonuclease, putative [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 180
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 81/194 (41%), Gaps = 26/194 (13%)
Query: 117 FLVLDLEGKIEILEFPVLMIDAKTMAF---------VDLFHRFVRPSKMSEQHINKYIEG 167
+LV+DLE E +PV ++ + +D F RFVRP++ + +
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRP---LLTHFCK 60
Query: 168 KYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV 227
+ + D+A P V QFE WL H + +A+ G++D + ++
Sbjct: 61 ELTHISQSNI--DSAAPLTTVWPQFERWLSHH---------RARVVGWASWGDYD-RQQL 108
Query: 228 PDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDD 287
++ + Q+ M +NLK F + +K G+ ++ + G H + D
Sbjct: 109 EEEWRRHQLGSALSSMPHVNLKQRFAQARQLQKP--VGLNSALQLAGMQFSGQQHRALVD 166
Query: 288 TKNITRVLQRMLAD 301
+N R+L +L +
Sbjct: 167 ARNTARLLPLILPN 180
>gi|116049519|ref|YP_791677.1| hypothetical protein PA14_44130 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390052|ref|ZP_06879527.1| hypothetical protein PaerPAb_17961 [Pseudomonas aeruginosa PAb1]
gi|313106587|ref|ZP_07792814.1| putative exonuclease [Pseudomonas aeruginosa 39016]
gi|355644666|ref|ZP_09053861.1| hypothetical protein HMPREF1030_02947 [Pseudomonas sp. 2_1_26]
gi|386065404|ref|YP_005980708.1| hypothetical protein NCGM2_2465 [Pseudomonas aeruginosa NCGM2.S1]
gi|416879532|ref|ZP_11920861.1| hypothetical protein PA15_22330 [Pseudomonas aeruginosa 152504]
gi|421168770|ref|ZP_15626836.1| hypothetical protein PABE177_3626 [Pseudomonas aeruginosa ATCC
700888]
gi|421175341|ref|ZP_15633030.1| hypothetical protein PACI27_3557 [Pseudomonas aeruginosa CI27]
gi|115584740|gb|ABJ10755.1| putative exonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|310879316|gb|EFQ37910.1| putative exonuclease [Pseudomonas aeruginosa 39016]
gi|334837330|gb|EGM16096.1| hypothetical protein PA15_22330 [Pseudomonas aeruginosa 152504]
gi|348033963|dbj|BAK89323.1| hypothetical protein NCGM2_2465 [Pseudomonas aeruginosa NCGM2.S1]
gi|354829121|gb|EHF13208.1| hypothetical protein HMPREF1030_02947 [Pseudomonas sp. 2_1_26]
gi|404528564|gb|EKA38642.1| hypothetical protein PABE177_3626 [Pseudomonas aeruginosa ATCC
700888]
gi|404532491|gb|EKA42374.1| hypothetical protein PACI27_3557 [Pseudomonas aeruginosa CI27]
Length = 183
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 83/205 (40%), Gaps = 51/205 (24%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSK--------MSE 158
+LV+DLE ++EI+E ++ A +D F RFVRP +
Sbjct: 4 WLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRDL 63
Query: 159 QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
HI++ G +D VW + FE WL QH + A +A+
Sbjct: 64 THISQA--NVDGAAHLDTVW-----------EAFERWLAQH---------RPRLAGWASW 101
Query: 219 GNWD---LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQ 274
G++D L+ + SQ+ P+ +NLK F + PR G+ ++
Sbjct: 102 GDYDRRQLEQEWRQHGLTSQLSEVPH----VNLKQRFGEVRQLPRP---VGLNAALQLAG 154
Query: 275 VPMFGSHHLGIDDTKNITRVLQRML 299
+ G H ++D +N R+L +L
Sbjct: 155 MSFQGQQHRALEDARNTARLLPLVL 179
>gi|404400243|ref|ZP_10991827.1| exonuclease [Pseudomonas fuscovaginae UPB0736]
Length = 178
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 32/195 (16%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIE 166
+LV+DLE ++EI+E +++ + +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTDDGGWPLAEMEIIEIGATLVNREGRE-LDHFQRFVRP-------LRRPLL 55
Query: 167 GKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ + + + DTA P EV FE WL QH + +A+ G++D +
Sbjct: 56 TPFCRELTHISQANIDTAAPLIEVWGAFERWLGQH---------QARLEGWASWGDYDRR 106
Query: 225 TKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLG 284
D K+ L NLK F K +K G+ G ++ + G H
Sbjct: 107 QLEQDWQKLQLTSLLSQVPH-ANLKQRFAKARKLQKP--LGLNGALQLAGLQFSGQQHRA 163
Query: 285 IDDTKNITRVLQRML 299
++D +N R+L +L
Sbjct: 164 LEDARNTARLLPLIL 178
>gi|401880970|gb|EJT45278.1| hypothetical protein A1Q1_06347 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697081|gb|EKD00349.1| hypothetical protein A1Q2_05318 [Trichosporon asahii var. asahii
CBS 8904]
Length = 396
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQI-KL 238
D A F +V+ +FE WL L + G G L+ A + T G WDL+ VP Q ++
Sbjct: 204 DAAPTFPQVLVRFEHWLDSWGLRDDG--GGLRGAMWVTDGPWDLRDFVPKQLHITPTPSY 261
Query: 239 PPYFM-EWINLKDVFYNFYKPR 259
P YF ++N+K+ + R
Sbjct: 262 PAYFQGRYLNVKNAVATYLADR 283
>gi|422589316|ref|ZP_16663979.1| exonuclease [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|422651554|ref|ZP_16714348.1| exonuclease [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330876090|gb|EGH10239.1| exonuclease [Pseudomonas syringae pv. morsprunorum str. M302280]
gi|330964631|gb|EGH64891.1| exonuclease [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 180
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 28/195 (14%)
Query: 117 FLVLDLEGKIEILEFPVLMIDAKTMAF---------VDLFHRFVRPSKMSE-QHINKYIE 166
+LV+DLE E +PV ++ + +D F RFVRP++ H K +
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCKELT 63
Query: 167 GKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTK 226
+++ D+A P V QFE WL H + +A+ G++D + +
Sbjct: 64 H------INQSNIDSAAPLTTVWPQFERWLSHH---------RARVVGWASWGDYD-RQQ 107
Query: 227 VPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGID 286
+ ++ + Q+ M +NLK F + +K G+ ++ + G H +
Sbjct: 108 LEEEWRHHQLGSALSSMPHVNLKQRFAQARQLQKP--VGLNSALQLAGMQFSGQQHRALV 165
Query: 287 DTKNITRVLQRMLAD 301
D +N R+L +L +
Sbjct: 166 DARNTARLLPLILPN 180
>gi|162452505|ref|YP_001614872.1| exonuclease [Sorangium cellulosum So ce56]
gi|161163087|emb|CAN94392.1| putative exonuclease [Sorangium cellulosum So ce56]
Length = 184
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 76/193 (39%), Gaps = 35/193 (18%)
Query: 111 SQDLDFFLVLDLEGKI-----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
++ LD LV+D+E EI+E V ++ + + VRP +
Sbjct: 2 AKRLDLILVIDVEATCWDGDPPPGEENEIIEIGVCPLEVASCRRRERRSILVRPER---S 58
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWL-IQHHLWEKGRGGHLKRAAFATC 218
++ + D D + F+E + L Q LW A+
Sbjct: 59 RVSPFCTALTTLTQAD---VDAGVSFREACATLRSELKAQDRLW-------------ASY 102
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMF 278
G++D + QC+ + LP + +N+K +F + S GM ++ +P+
Sbjct: 103 GDYD-RRMFERQCQSRGVPLP-FGPSHLNVKSLFAVTHA--LSREVGMAEALERAGLPLA 158
Query: 279 GSHHLGIDDTKNI 291
G+HH G+DD NI
Sbjct: 159 GTHHRGVDDAHNI 171
>gi|291232399|ref|XP_002736133.1| PREDICTED: fusilli-like [Saccoglossus kowalevskii]
Length = 636
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 134 LMIDAKTMAFVDLFHRFVRP--SKMSEQHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQ 191
++ID +T V + FV+ +++SE++ ++ G+ A P + VIQQ
Sbjct: 36 MVIDVETNKVVSVKQSFVKADHTEVSEEYCSE--------LGIKEEAIKNAEPLESVIQQ 87
Query: 192 FEAWLIQHHLWEKGRGGHLKRAAFATC--GNWDLKTKVPDQCKVSQIKLPPYFMEWINLK 249
+ + +G A F C G+ L+ + QC I+LP ++ ++ +++
Sbjct: 88 LDTHIRNELNSTEG-------ATFCFCIDGSLHLRQCLHPQCANKGIELPEHYYQFFDIR 140
Query: 250 DVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
F FY + + M + ++ + + D + I ++QR+++DG
Sbjct: 141 KEFRRFYT-LAPQVNSLKEMADHLKIDITPNTRHATGDVRAIGLLVQRLISDG 192
>gi|77460172|ref|YP_349679.1| exonuclease [Pseudomonas fluorescens Pf0-1]
gi|77384175|gb|ABA75688.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 180
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D + D F RFV+P++ + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH +G +A+ G++
Sbjct: 63 THITQANI----------DAAQPLSEVWPAFERWLGQHQTRLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLQLDSALSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLVL 178
>gi|49081684|gb|AAT50242.1| PA1575, partial [synthetic construct]
Length = 184
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMS-EQHINKYI 165
+LV+DLE ++EI+E ++ A +D F RFVRP + H + +
Sbjct: 4 WLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRDL 63
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD--- 222
+ VD H V + FE WL QH + A +A+ G++D
Sbjct: 64 T-HISQANVDGAAH-----LNTVWEAFERWLAQH---------RPRLAGWASWGDYDRRQ 108
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSH 281
L+ + SQ+ P+ +NLK F + PR G+ ++ + G
Sbjct: 109 LEQEWRQHGLTSQLSEVPH----VNLKQRFGEVRQLPRP---VGLNAALQLAGMSFQGQQ 161
Query: 282 HLGIDDTKNITRVLQRML 299
H ++D +N R+L +L
Sbjct: 162 HRALEDARNTARLLPLVL 179
>gi|15596772|ref|NP_250266.1| hypothetical protein PA1575 [Pseudomonas aeruginosa PAO1]
gi|107101007|ref|ZP_01364925.1| hypothetical protein PaerPA_01002037 [Pseudomonas aeruginosa PACS2]
gi|218892469|ref|YP_002441336.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
gi|254234675|ref|ZP_04927998.1| hypothetical protein PACG_00543 [Pseudomonas aeruginosa C3719]
gi|254239923|ref|ZP_04933245.1| hypothetical protein PA2G_00554 [Pseudomonas aeruginosa 2192]
gi|386059536|ref|YP_005976058.1| putative exonuclease [Pseudomonas aeruginosa M18]
gi|392984961|ref|YP_006483548.1| exonuclease [Pseudomonas aeruginosa DK2]
gi|416861264|ref|ZP_11914566.1| putative exonuclease [Pseudomonas aeruginosa 138244]
gi|418587051|ref|ZP_13151087.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|418592488|ref|ZP_13156358.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|419755563|ref|ZP_14281918.1| putative exonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|420140571|ref|ZP_14648324.1| hypothetical protein PACIG1_3844 [Pseudomonas aeruginosa CIG1]
gi|421154740|ref|ZP_15614242.1| hypothetical protein PABE171_3604 [Pseudomonas aeruginosa ATCC
14886]
gi|421161644|ref|ZP_15620582.1| hypothetical protein PABE173_4159 [Pseudomonas aeruginosa ATCC
25324]
gi|421181335|ref|ZP_15638848.1| hypothetical protein PAE2_3312 [Pseudomonas aeruginosa E2]
gi|421516209|ref|ZP_15962895.1| putative exonuclease [Pseudomonas aeruginosa PAO579]
gi|424940793|ref|ZP_18356556.1| putative exonuclease [Pseudomonas aeruginosa NCMG1179]
gi|451986062|ref|ZP_21934255.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudomonas aeruginosa 18A]
gi|9947538|gb|AAG04964.1|AE004586_2 hypothetical protein PA1575 [Pseudomonas aeruginosa PAO1]
gi|126166606|gb|EAZ52117.1| hypothetical protein PACG_00543 [Pseudomonas aeruginosa C3719]
gi|126193301|gb|EAZ57364.1| hypothetical protein PA2G_00554 [Pseudomonas aeruginosa 2192]
gi|218772695|emb|CAW28480.1| putative exonuclease [Pseudomonas aeruginosa LESB58]
gi|334836920|gb|EGM15705.1| putative exonuclease [Pseudomonas aeruginosa 138244]
gi|346057239|dbj|GAA17122.1| putative exonuclease [Pseudomonas aeruginosa NCMG1179]
gi|347305842|gb|AEO75956.1| putative exonuclease [Pseudomonas aeruginosa M18]
gi|375042398|gb|EHS35052.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|375048663|gb|EHS41180.1| putative exonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|384398260|gb|EIE44668.1| putative exonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|392320466|gb|AFM65846.1| putative exonuclease [Pseudomonas aeruginosa DK2]
gi|403246670|gb|EJY60373.1| hypothetical protein PACIG1_3844 [Pseudomonas aeruginosa CIG1]
gi|404349937|gb|EJZ76274.1| putative exonuclease [Pseudomonas aeruginosa PAO579]
gi|404521648|gb|EKA32219.1| hypothetical protein PABE171_3604 [Pseudomonas aeruginosa ATCC
14886]
gi|404539370|gb|EKA48856.1| hypothetical protein PABE173_4159 [Pseudomonas aeruginosa ATCC
25324]
gi|404543967|gb|EKA53181.1| hypothetical protein PAE2_3312 [Pseudomonas aeruginosa E2]
gi|451756242|emb|CCQ86778.1| Inhibitor of the KinA pathway to sporulation,predicted exonuclease
[Pseudomonas aeruginosa 18A]
gi|453046930|gb|EME94645.1| exonuclease [Pseudomonas aeruginosa PA21_ST175]
Length = 183
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMS-EQHINKYI 165
+LV+DLE ++EI+E ++ A +D F RFVRP + H + +
Sbjct: 4 WLVIDLEATTAEGGWPLEEMEIIEIGATLVAAADARELDHFQRFVRPVRRPLLTHFCRDL 63
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD--- 222
+ VD H V + FE WL QH + A +A+ G++D
Sbjct: 64 T-HISQANVDGAAH-----LNTVWEAFERWLAQH---------RPRLAGWASWGDYDRRQ 108
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSH 281
L+ + SQ+ P+ +NLK F + PR G+ ++ + G
Sbjct: 109 LEQEWRQHGLTSQLSEVPH----VNLKQRFGEVRQLPRP---VGLNAALQLAGMSFQGQQ 161
Query: 282 HLGIDDTKNITRVLQRML 299
H ++D +N R+L +L
Sbjct: 162 HRALEDARNTARLLPLVL 179
>gi|339488533|ref|YP_004703061.1| exonuclease [Pseudomonas putida S16]
gi|338839376|gb|AEJ14181.1| exonuclease, RNase T and DNA polymerase III [Pseudomonas putida
S16]
Length = 183
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 50/203 (24%)
Query: 114 LDFFLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSE------ 158
+ +LV+DLE G ++E V+ I A + VD F RFV+P + +
Sbjct: 1 MGHWLVIDLEATTDDGGWPVIEMEVIEIGASLVTRDGREVDHFQRFVKPRRRPQLTPFCR 60
Query: 159 --QHINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFA 216
HI++ D+A F+EV FE WL H G L+ A+
Sbjct: 61 ELTHISQASV-------------DSAASFREVWASFERWLGHHR-------GQLQ--AWV 98
Query: 217 TCGNWD---LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKN 272
+ G++D L + S ++ P+ INLK F K R G+ G ++
Sbjct: 99 SWGDYDRQQLHQEWQQHGLDSLLRTLPH----INLKQ---RFAKARHLQRPAGLNGALQL 151
Query: 273 RQVPMFGSHHLGIDDTKNITRVL 295
+ G H ++D +N R+L
Sbjct: 152 AGMHFCGQQHRALEDARNTARLL 174
>gi|213962982|ref|ZP_03391241.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
sputigena Capno]
gi|213954323|gb|EEB65646.1| exonuclease, RNase T and DNA polymerase III [Capnocytophaga
sputigena Capno]
Length = 183
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLP-PYFMEWINLKDVFYNFYKPRKSEATGMMGMMKN 272
+A+ GN+D + + QC + KLP P E IN+K++F + K GM +
Sbjct: 96 TWASYGNYD-RNMLQKQCALR--KLPYPMRNEHINVKELFQEVTQHPKR--LGMHQALNY 150
Query: 273 RQVPMFGSHHLGIDDTKNITRVL 295
++P+ G+HH G DD NI +++
Sbjct: 151 LKIPLVGTHHRGKDDAYNIAKIM 173
>gi|26340948|dbj|BAC34136.1| unnamed protein product [Mus musculus]
Length = 88
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 254 NFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
NFYK +S+ T + M++ + G H G+DD+KNI R+ RML DG ++I +
Sbjct: 5 NFYKVPRSQ-TKLTIMLEKLGMDYDGRPHSGLDDSKNIARIAIRMLQDGCELRINEK 60
>gi|398861884|ref|ZP_10617498.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM79]
gi|398231498|gb|EJN17485.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM79]
Length = 182
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 46/198 (23%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D K +D F FVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGQE-LDHFQCFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D + P +V FE WL QHH +G +A+ G++
Sbjct: 63 THITQANI----------DASQPLTDVWPLFERWLGQHHARLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + D ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQDWQRLQLDSALSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVL 295
G H ++D +N R+L
Sbjct: 157 NGQQHRALEDARNTARLL 174
>gi|325302616|tpg|DAA34168.1| TPA_inf: hypothetical secreted protein 1605 [Amblyomma variegatum]
Length = 151
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 17/107 (15%)
Query: 62 GASTRWRPMCLYFTQGKCTMMDDVMHLEKFNHDISRDLQVDAAAFQHKCSQDLDFFLVLD 121
A T RP + + +++ ++ + S + AA K QD D+FLVLD
Sbjct: 20 AARTSGRPASFLWATSR-----NLLQEQRMSRMASSPAYLSAATVPPK--QDFDYFLVLD 72
Query: 122 LEGKI----------EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE 158
E EI+EFPVL ++ T FH +V P E
Sbjct: 73 FEATCSQQKGVPSPQEIIEFPVLKVNGSTFETEATFHTYVEPQAHPE 119
>gi|398837808|ref|ZP_10595096.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM102]
gi|398117960|gb|EJM07702.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM102]
Length = 182
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 46/198 (23%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D K +D F FVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGQE-LDHFQCFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D + P +V FE WL QHH +G +A+ G++
Sbjct: 63 THITQANI----------DASQPLTDVWPLFERWLGQHHASLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + D ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQDWQRLQLDSALSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVL 295
G H ++D +N R+L
Sbjct: 157 NGQQHRALEDARNTARLL 174
>gi|424924148|ref|ZP_18347509.1| Inhibitor of the KinA pathway to sporulation [Pseudomonas
fluorescens R124]
gi|404305308|gb|EJZ59270.1| Inhibitor of the KinA pathway to sporulation [Pseudomonas
fluorescens R124]
Length = 180
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D + D F RFV+P++ + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH +G +A+ G++
Sbjct: 63 THITQANI----------DAAQPLSEVWPAFERWLGQHQTRLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFGS 280
D K + + ++ Q+ ++ +NLK F K R+ E G+ G ++ + G
Sbjct: 104 DRKQLLQEWQRL-QLDSVLSRVQHMNLKQ---RFAKARRLERPLGLNGALQLAGMQFSGQ 159
Query: 281 HHLGIDDTKNITRVL 295
H ++D +N R+L
Sbjct: 160 QHRALEDARNTARLL 174
>gi|423096447|ref|ZP_17084243.1| exonuclease family protein [Pseudomonas fluorescens Q2-87]
gi|397886810|gb|EJL03293.1| exonuclease family protein [Pseudomonas fluorescens Q2-87]
Length = 180
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 42/200 (21%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIE 166
+LV+DLE ++EI+E +++ + VD F RFVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVN-RDGREVDHFQRFVRP-------LRRPLL 55
Query: 167 GKYGK--FGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLK 224
+ + + + D+A P EV FE WL +H +G + + G++D K
Sbjct: 56 TPFCRELTHITQASIDSAAPLTEVWPAFERWLAPYHANLEG---------WVSWGDYDRK 106
Query: 225 TKVPD----QCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFG 279
+ + Q ++LP +NLK F K R+ E TG+ G ++ + G
Sbjct: 107 QLLQEWQHQQLHSVLVQLPH-----MNLKQ---RFAKARRLERPTGLNGALQLAGLQFNG 158
Query: 280 SHHLGIDDTKNITRVLQRML 299
H ++D +N R+L +L
Sbjct: 159 QQHRALEDARNTARLLPLVL 178
>gi|452841585|gb|EME43522.1| hypothetical protein DOTSEDRAFT_45420 [Dothistroma septosporum
NZE10]
Length = 720
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 185 FKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME 244
F++ I F+A+ +H + + G G AF T WDL+ ++P + + + LPPY
Sbjct: 148 FRDAIGTFDAFAREHLVPKDGDSGAQPTFAFVTLTPWDLRVQLPREARDKNVVLPPYLQH 207
Query: 245 WI--NLKDVFYNF 255
I L+ + F
Sbjct: 208 PILFGLRGEYQTF 220
>gi|422298001|ref|ZP_16385624.1| exonuclease [Pseudomonas avellanae BPIC 631]
gi|407990435|gb|EKG32522.1| exonuclease [Pseudomonas avellanae BPIC 631]
Length = 181
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 84/195 (43%), Gaps = 28/195 (14%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKMSE-QHINKYIE 166
+LV+DLE E + E V+ I A + +D F RFVRP++ H K +
Sbjct: 5 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCKELT 64
Query: 167 GKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTK 226
+++ D+A P V QFE WL H + +A+ G++D + +
Sbjct: 65 H------INQSNIDSAAPLTTVWPQFERWLSHH---------RARVVGWASWGDYD-RQQ 108
Query: 227 VPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGID 286
+ ++ + Q+ M +NLK F + +K G+ ++ + G H +
Sbjct: 109 LEEEWRHHQLGSVLSSMPHVNLKQRFAQARQLQKP--VGLNSALQLAGMQFSGQQHRALV 166
Query: 287 DTKNITRVLQRMLAD 301
D +N R+L +L +
Sbjct: 167 DARNTARLLPLILPN 181
>gi|357013126|ref|ZP_09078125.1| 3-5 exonuclease eri-1 [Paenibacillus elgii B69]
Length = 177
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 117 FLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEG 167
++V DLE + EI+E + I+ + + VD F FV+P +N ++
Sbjct: 3 YIVFDLEATCWEHDRTKQNEIIEIGAVKINEQ-LEIVDEFQTFVKPI------LNPWLSD 55
Query: 168 KYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTK 226
K + + + A F + IQQF+ W+ G+ + + G +D K++
Sbjct: 56 FCKKLTSITQEDVNQADYFPQAIQQFQDWI--------GKEDYF----LCSWGLYD-KSQ 102
Query: 227 VPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGID 286
+ C+++++ + I++K K GM + ++P+ G+HH GID
Sbjct: 103 LTKDCELNRLG-TEWLANHISIKHQHGKLIG--KERGVGMARALDMLKLPLEGTHHRGID 159
Query: 287 DTKNITRVLQRML 299
D +NI ++ R+
Sbjct: 160 DARNIAKIFVRIF 172
>gi|398855281|ref|ZP_10611778.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM80]
gi|398232129|gb|EJN18105.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM80]
Length = 180
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D + D F RFV+P++ + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D+A P EV FE WL QH + +A+ G++
Sbjct: 63 THITQANI----------DSAQPLTEVWPAFERWLAQH---------QPRLEGWASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLNIDSGLSKVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 NGQQHRALEDARNTARLLPLVL 178
>gi|398977520|ref|ZP_10687191.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM25]
gi|398137953|gb|EJM26988.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM25]
Length = 180
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 85/202 (42%), Gaps = 46/202 (22%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D + D F RFV+P++ + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVD-RAGREQDHFQRFVKPTRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D A P EV FE WL QH +G +A+ G++
Sbjct: 63 THITQANI----------DAAQPLSEVWPAFERWLGQHQTRLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + + ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQEWQRLQLDSVLSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGMQF 156
Query: 278 FGSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 157 TGQQHRALEDARNTARLLPLVL 178
>gi|229591814|ref|YP_002873933.1| hypothetical protein PFLU4398 [Pseudomonas fluorescens SBW25]
gi|229363680|emb|CAY51043.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 180
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 44/201 (21%)
Query: 117 FLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSKMSE-----QHIN 162
+L++DLE G + E V+ I A + +D F RFVRP + + +
Sbjct: 4 WLIIDLEATTDEGGWPVTEMEVIEIGASLVNRQGRELDHFQRFVRPLRRPLLTPFCRQLT 63
Query: 163 KYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD 222
+ D A P EV FE WL QHH +G +A+ G++D
Sbjct: 64 HITQANM----------DGAAPITEVWPLFERWLGQHHARLEG---------WASWGDYD 104
Query: 223 ---LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMF 278
L+ + S + P+ +NLK F K R+ + G+ G ++ +
Sbjct: 105 RAQLELEWQRHGLASALAHTPH----VNLKQ---RFAKARRLDKPLGLNGALQLAGMQFH 157
Query: 279 GSHHLGIDDTKNITRVLQRML 299
G H ++D +N R+L +L
Sbjct: 158 GQQHRALEDARNTARLLPLIL 178
>gi|398902099|ref|ZP_10650787.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM50]
gi|398178946|gb|EJM66575.1| inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas sp. GM50]
Length = 182
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 46/198 (23%)
Query: 117 FLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE-----QHI 161
+LV+DLE ++EI+E ++D K +D F FVRP + + +
Sbjct: 4 WLVIDLEATTDEGGWPVTEMEIIEIGATLVDRKGQE-LDHFQCFVRPLRRPLLTPFCREL 62
Query: 162 NKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW 221
+ D + P ++ FE WL QHH +G +A+ G++
Sbjct: 63 THITQANI----------DASQPLTDIWPLFERWLGQHHASLEG---------WASWGDY 103
Query: 222 DLKTKVPDQCKV---SQIKLPPYFMEWINLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPM 277
D K + D ++ S + P+ +NLK F K R+ E G+ G ++ +
Sbjct: 104 DRKQLLQDWQRLQLDSALSRVPH----MNLKQ---RFAKARRLERPLGLNGALQLAGLQF 156
Query: 278 FGSHHLGIDDTKNITRVL 295
G H ++D +N R+L
Sbjct: 157 NGQQHRALEDARNTARLL 174
>gi|326426891|gb|EGD72461.1| hypothetical protein PTSG_11592 [Salpingoeca sp. ATCC 50818]
Length = 978
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 21/154 (13%)
Query: 109 KCSQDLDFFLVLDLEGKIE---------ILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQ 159
K +D F V+D E E I+EFP+++ID V+ + RP
Sbjct: 27 KHGKDATFICVVDFEATCEEDDANFPHEIIEFPLVIIDVHRKEIVEKQQFYCRPV----- 81
Query: 160 HINKYIEGKYGKF-GVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATC 218
N + + G+ + D+A F V+ Q A L ++ + G + A+
Sbjct: 82 -FNPILSPFCTQLTGIKQESVDSAAEFPHVLDQVMAILDKYRSHDAGH-----KLLLASD 135
Query: 219 GNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVF 252
G WD + QC+ S + P +W++++ F
Sbjct: 136 GPWDFRNFFQWQCRASSVPAPALMHQWLDIRKAF 169
>gi|328779875|ref|XP_397080.4| PREDICTED: epithelial splicing regulatory protein 2 [Apis
mellifera]
Length = 1215
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 175 DRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV-PDQCKV 233
+R + +P ++ IQQFEAW G F G ++ + P+ C
Sbjct: 605 ERTVREHGIPLEQAIQQFEAWWSSMSCMTSGSA-----PRFVVDGQAPMRQCLHPEACN- 658
Query: 234 SQIKLPPYFMEWINLKDVFYNFYKPRKSEAT-GMMGMMKNRQVPMFGSHHLGIDDTKNIT 292
I +P ++ + +L+ F Y +T G+ M++ +P+ + + + +++
Sbjct: 659 KDIDVPEHYTLFHDLRKEFVACYSTHGELSTFGIQEMLEYFGLPLDTENDYHVKEIQDMI 718
Query: 293 RVLQRMLADGARVQITARRNPDSRNV 318
V+QRM+ DG Q NP++ N+
Sbjct: 719 CVIQRMIKDGHIFQ-----NPEAVNI 739
>gi|289626405|ref|ZP_06459359.1| exonuclease [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289649559|ref|ZP_06480902.1| exonuclease [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581480|ref|ZP_16656622.1| exonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422606238|ref|ZP_16678248.1| exonuclease [Pseudomonas syringae pv. mori str. 301020]
gi|298159084|gb|EFI00143.1| Inhibitor of the KinA pathway to sporulation, predicted exonuclease
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330866329|gb|EGH01038.1| exonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330889890|gb|EGH22551.1| exonuclease [Pseudomonas syringae pv. mori str. 301020]
Length = 180
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPVLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTAVWPQFERWLSHH---------RARVLGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + ++ M +NLK F + +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRYHRLDSALSSMPHVNLKQRFAQARQLQKP--MGLNSALQLAGMQFTG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILPN 180
>gi|134111855|ref|XP_775463.1| hypothetical protein CNBE1780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258122|gb|EAL20816.1| hypothetical protein CNBE1780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 612
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 130 EFPVLMI--------DAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGK--FGVDRVWH 179
EFPV+++ + + +D F +VRP+ + I + K G+ +
Sbjct: 210 EFPVVLVRWGEPNEEGKRVLEKIDSFRSYVRPTW-------RPILTDFCKSLTGIQQETV 262
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIK-L 238
D + F EV++Q E WL + L +G G LK A + T G WDL+ VP Q ++
Sbjct: 263 DKSPIFPEVLKQLEGWLDKWDL--RGDKG-LKDALWVTDGPWDLRDFVPKQLHITPPNPF 319
Query: 239 PPYF-MEWINLK 249
P YF ++N+K
Sbjct: 320 PNYFHGPYLNIK 331
>gi|257484494|ref|ZP_05638535.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|422595885|ref|ZP_16670170.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422683913|ref|ZP_16742168.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330986187|gb|EGH84290.1| exonuclease [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331013242|gb|EGH93298.1| exonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 180
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPVLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARVLGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + ++ M +NLK F + +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRYHRLDSALSSMPHVNLKQRFAQARQLQKP--MGLNSALQLAGMQFTG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILPN 180
>gi|71736737|ref|YP_274026.1| exonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|416017607|ref|ZP_11564687.1| exonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|416026040|ref|ZP_11569614.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|71557290|gb|AAZ36501.1| exonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320323478|gb|EFW79563.1| exonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|320329479|gb|EFW85471.1| exonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 180
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 82/202 (40%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPVLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARVLGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + ++ M +NLK F + +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRYHRLDSALSSMPHVNLKQRFAQARQLQKP--MGLNSALQLAGMQFAG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILLN 180
>gi|302185096|ref|ZP_07261769.1| exonuclease [Pseudomonas syringae pv. syringae 642]
Length = 180
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 80/202 (39%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIEILEFPVLMIDAKTMAF---------VDLFHRFVRPSKM--------SEQ 159
+LV+DLE E +PV ++ + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARIVGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + + M INLK F + +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRHHHLDSALSGMPHINLKQRFAQARQLQKP--MGLNSALQLAGMQFSG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILPN 180
>gi|198472654|ref|XP_002133092.1| GA28991 [Drosophila pseudoobscura pseudoobscura]
gi|198139107|gb|EDY70494.1| GA28991 [Drosophila pseudoobscura pseudoobscura]
Length = 83
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 242 FMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLAD 301
F +WI+ +D++ +YK R +++ + G H GIDD KN+ ++ +M D
Sbjct: 5 FNQWIDARDIYKKWYKYR---PFSFDNALEHVMLTFQGRAHSGIDDAKNLGSLICKMFRD 61
Query: 302 GARVQITARRNP 313
GA IT P
Sbjct: 62 GAPFSITKDLTP 73
>gi|422647744|ref|ZP_16710871.1| exonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330961285|gb|EGH61545.1| exonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 180
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 26/194 (13%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKMSEQHINKYIEG 167
+LV+DLE E + E V+ I A + +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPVRRP---LLTHFCR 60
Query: 168 KYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV 227
+ + D+A P V QFE WL H + +A+ G++D + ++
Sbjct: 61 ELTHITQSNI--DSAAPLTAVWPQFERWLAHH---------RARVVGWASWGDYD-RQQL 108
Query: 228 PDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDD 287
++ + Q+ M +NLK F +K G+ ++ + G H + D
Sbjct: 109 EEEWRNHQLDSALSSMPHVNLKQRFAQARHLQKP--LGLNSALQLAGMQFSGQQHRALVD 166
Query: 288 TKNITRVLQRMLAD 301
+N R+L +L +
Sbjct: 167 ARNTARLLPLILTN 180
>gi|333900627|ref|YP_004474500.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas fulva 12-X]
gi|333115892|gb|AEF22406.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas fulva 12-X]
Length = 187
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 36/196 (18%)
Query: 114 LDFFLVLDLEGK----------IEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINK 163
+ ++LV+DLE +EI+E ++DA +D F RFVRP + + +
Sbjct: 1 MAYWLVIDLEATTEEGGWPVEHMEIIEIGASLVDASGHE-IDHFQRFVRP--LRRPILTR 57
Query: 164 YIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDL 223
+ D D A + QFE WL H H + + + G++D
Sbjct: 58 FCRQLTHIAQADV---DAAATLPTLWPQFERWLEPH---------HARLGGWCSWGDYDR 105
Query: 224 KTKVPDQCK---VSQIKLPPYFMEWINLKDVFYNFYKPRK-SEATGMMGMMKNRQVPMFG 279
+ D + S ++ P+ +NLK F K R+ + G+ ++ + G
Sbjct: 106 QQLEQDWHQHGLTSHLQTLPH----LNLKQ---RFAKARQLARPVGLNAALQLAGISFSG 158
Query: 280 SHHLGIDDTKNITRVL 295
H ++D +N R+L
Sbjct: 159 QQHRALNDARNTARLL 174
>gi|402818180|ref|ZP_10867765.1| hypothetical protein PAV_11c01420 [Paenibacillus alvei DSM 29]
gi|402504271|gb|EJW14801.1| hypothetical protein PAV_11c01420 [Paenibacillus alvei DSM 29]
Length = 224
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 39/183 (21%)
Query: 127 EILEFPVLMIDAKTMAFV--DLFHRFVRPS---KMSEQHINKYIEGKYGKFGVDRVWHDT 181
EI+E + + FV D F FV+P+ K++E +N G+ +
Sbjct: 21 EIIEIGAVKVTESDDKFVIADTFQAFVKPTLSPKLTEDTVNFT--------GITQEDITN 72
Query: 182 ALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNW--DLKTKVPDQCKVSQIKLP 239
A ++V+ QF AW+ +A C W D KT+ +C+ Q K+P
Sbjct: 73 ASTLQDVLDQFIAWI--------------DTDDYALCS-WGPDDKTQFLKECR--QKKIP 115
Query: 240 PYFMEWI----NLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVL 295
+ W+ NL+ K ++ G+ ++ VP G+ H +DD N +
Sbjct: 116 ---LHWLRNHNNLQKQVSTAMKREHNQQIGLKSALEALDVPFVGNQHRALDDAYNTALIY 172
Query: 296 QRM 298
RM
Sbjct: 173 IRM 175
>gi|328716236|ref|XP_001946855.2| PREDICTED: RNA-binding protein fusilli-like [Acyrthosiphon pisum]
Length = 858
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 30/178 (16%), Positives = 81/178 (45%), Gaps = 8/178 (4%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGV-DRVWHDTALPF 185
EI+ +++D T V + V+P+++ +Q+ N + G+ +++ + +P
Sbjct: 67 EIVLLIYVVVDMTTNTVVGIQQYLVKPTEV-DQNENMLSDQVTSDIGITEKMVKTSGIPL 125
Query: 186 KEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEW 245
++ I +F+ ++ ++ + T G ++ + + + I+LP Y+ +
Sbjct: 126 QDAIDKFDTYVKSLNIEPQ-----TPMFRIVTDGQLPIRQCLHRESSIKDIELPEYYNVF 180
Query: 246 INLKDVFYNFYK-PRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+L+ F FY P+ + ++ ++ + + K++ ++QR++ADG
Sbjct: 181 HDLRKDFSKFYNAPQDQTFNSITDLVNYLEITHEIDSQFYVAEVKDMVNIVQRLIADG 238
>gi|353240743|emb|CCA72597.1| related to exonuclease, RNase T and DNA polymerase
III-Flavobacterium johnsoniae [Piriformospora indica DSM
11827]
Length = 221
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 211 KRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMM 270
K ++++ G +D + + QCKV ++ P + + N+KD+F Y P + GM
Sbjct: 124 KEYSWSSWGAYD-RNMIKRQCKVFGLESPFSPIHY-NIKDLFKELY-PNLNGGYGMTNAF 180
Query: 271 KNR-QVPMFGSHHLGIDDTKNITRVLQRML 299
P+ G+HH G DD KNI +L +++
Sbjct: 181 AAVCDGPIEGTHHRGGDDAKNIGTILGKLI 210
>gi|237797629|ref|ZP_04586090.1| exonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331020479|gb|EGI00536.1| exonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 180
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 26/188 (13%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKMSEQHINKYIEG 167
+LV+DLE E + E V+ I A + +D F RFVRP + + +
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPVRRP---LLTHFCR 60
Query: 168 KYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV 227
+ + D+A P V QFE WL H + +A+ G++D + ++
Sbjct: 61 QLTHISQSNI--DSAAPLTTVWPQFERWLSHH---------RARVLGWASWGDYD-RQQL 108
Query: 228 PDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDD 287
++ + Q+ M +NLK F + +K G+ ++ + G H + D
Sbjct: 109 EEEWRHHQLDSALSSMPHVNLKQRFAQARQLQKP--LGLNSALQLAGMQFTGQQHRALVD 166
Query: 288 TKNITRVL 295
+N R+L
Sbjct: 167 ARNTARLL 174
>gi|120554172|ref|YP_958523.1| exonuclease [Marinobacter aquaeolei VT8]
gi|120324021|gb|ABM18336.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
Length = 279
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 23/174 (13%)
Query: 124 GKIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTAL 183
G +EI+EF + +T +D VRP + + ++ + G + + + A
Sbjct: 37 GNMEIIEFGCALA-TRTGELLDSRSFLVRPVRNPD--LSAFCRSLTG---ISQAMVNAAP 90
Query: 184 PFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFM 243
P+ EV++ + WL G + + + GN+D + Q + + P F+
Sbjct: 91 PYPEVVRALDEWL----------GQPAESLIWCSWGNYD---RHHIQAESEAHGIAPRFL 137
Query: 244 EW--INLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVL 295
+NLK ++ +K TG+ + + G H G+DD +NI R+L
Sbjct: 138 SCPHLNLKRIWRRSTGQKKK--TGLASALAFHNLAFEGRPHRGVDDARNIVRLL 189
>gi|422642046|ref|ZP_16705466.1| exonuclease [Pseudomonas syringae Cit 7]
gi|440746649|ref|ZP_20925929.1| exonuclease [Pseudomonas syringae BRIP39023]
gi|330954430|gb|EGH54690.1| exonuclease [Pseudomonas syringae Cit 7]
gi|440370909|gb|ELQ07774.1| exonuclease [Pseudomonas syringae BRIP39023]
Length = 180
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARIVGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + + M +NLK F +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRQHHLDSALSSMPHVNLKQRFAQARHLQKP--MGLNSALQLAGMQFSG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILPN 180
>gi|422675576|ref|ZP_16734919.1| exonuclease [Pseudomonas syringae pv. aceris str. M302273]
gi|330973293|gb|EGH73359.1| exonuclease [Pseudomonas syringae pv. aceris str. M302273]
Length = 180
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARIVGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + + M +NLK F +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRHHHLDSALSSMPHVNLKQRFAQARHLQKP--IGLNSALQLAGMQFSG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILPN 180
>gi|289679622|ref|ZP_06500512.1| exonuclease [Pseudomonas syringae pv. syringae FF5]
gi|422617306|ref|ZP_16686009.1| exonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|422669598|ref|ZP_16729442.1| exonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440721500|ref|ZP_20901897.1| exonuclease [Pseudomonas syringae BRIP34876]
gi|440724547|ref|ZP_20904827.1| exonuclease [Pseudomonas syringae BRIP34881]
gi|330897689|gb|EGH29108.1| exonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|330981951|gb|EGH80054.1| exonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440363363|gb|ELQ00531.1| exonuclease [Pseudomonas syringae BRIP34876]
gi|440369840|gb|ELQ06794.1| exonuclease [Pseudomonas syringae BRIP34881]
Length = 180
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 4 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCRELT 63
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 64 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARIVGWASWG 101
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + + M +NLK F +K G+ ++ + G
Sbjct: 102 DYD-RQQLEEEWRHHHLDSALSSMPHVNLKQRFAQARHLQKP--MGLNSALQLAGMQFSG 158
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 159 QQHRALVDARNTARLLPLILPN 180
>gi|196018082|ref|XP_002118730.1| hypothetical protein TRIADDRAFT_34627 [Trichoplax adhaerens]
gi|190578360|gb|EDV18784.1| hypothetical protein TRIADDRAFT_34627 [Trichoplax adhaerens]
Length = 87
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 10/49 (20%)
Query: 115 DFFLVLDLEG----------KIEILEFPVLMIDAKTMAFVDLFHRFVRP 153
D++ V+D E K EI+EFP LM++A+T+A FH + RP
Sbjct: 19 DYYCVIDFEATCEEVNPRKYKHEIIEFPALMVNARTLAVESQFHFYCRP 67
>gi|66045076|ref|YP_234917.1| exonuclease [Pseudomonas syringae pv. syringae B728a]
gi|63255783|gb|AAY36879.1| Exonuclease [Pseudomonas syringae pv. syringae B728a]
Length = 181
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 5 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCRELT 64
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 65 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARIVGWASWG 102
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + + M +NLK F +K G+ ++ + G
Sbjct: 103 DYD-RQQLEEEWRHHHLDSALSSMPHVNLKQRFAQARHLQKP--IGLNSALQLAGMQFSG 159
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 160 QQHRALVDARNTARLLPLILPN 181
>gi|424071559|ref|ZP_17808982.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|443644642|ref|ZP_21128492.1| DEDDh 3'-5' exonuclease domain protein [Pseudomonas syringae pv.
syringae B64]
gi|407998647|gb|EKG39048.1| exonuclease [Pseudomonas syringae pv. avellanae str. ISPaVe037]
gi|443284659|gb|ELS43664.1| DEDDh 3'-5' exonuclease domain protein [Pseudomonas syringae pv.
syringae B64]
Length = 181
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 42/202 (20%)
Query: 117 FLVLDLEGKIE-----ILEFPVLMIDAKTMA----FVDLFHRFVRPSKM--------SEQ 159
+LV+DLE E + E V+ I A + +D F RFVRP++
Sbjct: 5 WLVIDLEATTEEGGWPVAEMEVIEIGATLVNQDGRELDHFERFVRPARRPLLTHFCRELT 64
Query: 160 HINKYIEGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCG 219
HIN+ D+A P V QFE WL H + +A+ G
Sbjct: 65 HINQSSI-------------DSAAPLTTVWPQFERWLSHH---------RARIVGWASWG 102
Query: 220 NWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFG 279
++D + ++ ++ + + M +NLK F +K G+ ++ + G
Sbjct: 103 DYD-RQQLEEEWRHHHLDSALSSMPHVNLKQRFAQARHLQKP--MGLNSALQLAGMQFSG 159
Query: 280 SHHLGIDDTKNITRVLQRMLAD 301
H + D +N R+L +L +
Sbjct: 160 QQHRALVDARNTARLLPLILPN 181
>gi|390456686|ref|ZP_10242214.1| exonuclease domain-containing protein 1 [Paenibacillus peoriae KCTC
3763]
Length = 177
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 117 FLVLDLEG---------KIEILEFPVLMIDAKTMAFVDLFHRFVRPSKMSEQHINKYIEG 167
+++ DLE + EI+E + ++A + + F F++P K++ Q ++ + +
Sbjct: 3 YIIFDLEATCWENDRTRQNEIIEIGAVKVNA-NLEIISEFQAFIKP-KLNPQ-LSDFCKS 59
Query: 168 KYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKV 227
+ + D A F VI +F+ W+ + + + G +D K+++
Sbjct: 60 LTS---ISQQEIDMATYFPLVIYKFQEWIGKEPYY------------LCSWGFYD-KSQL 103
Query: 228 PDQCKVSQIKLPPYFMEWI-NLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFGSHHLGI 285
C++ +I+ EWI N + + K ++ GM +K +P+ G+HH GI
Sbjct: 104 KKDCELHKIR-----TEWIRNHISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGI 158
Query: 286 DDTKNITRVLQRML 299
DD KNI+++ ++
Sbjct: 159 DDAKNISKIFVKIF 172
>gi|395651059|ref|ZP_10438909.1| exonuclease family protein [Pseudomonas extremaustralis 14-3
substr. 14-3b]
Length = 180
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 79/197 (40%), Gaps = 36/197 (18%)
Query: 117 FLVLDLE-----GKIEILEFPVLMIDAKTMAF----VDLFHRFVRPSK--MSEQHINKYI 165
+L++DLE G + E V+ I A + +D F RFVRP + + K
Sbjct: 4 WLIIDLEATTDDGGWPVTEMEVIEIGASLVNREGRELDHFQRFVRPLRRPLLTPFCRKLT 63
Query: 166 EGKYGKFGVDRVWHDTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWD--- 222
D+A P EV FE WL QH +G +A+ G++D
Sbjct: 64 HITQANM-------DSAAPITEVWPLFERWLGQHQPRLEG---------WASWGDYDRHQ 107
Query: 223 LKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNRQVPMFGSHH 282
L+ + S + P+ +NLK F R + G+ G ++ + G H
Sbjct: 108 LELEWQRHALASALAHTPH----VNLKQRFAKAR--RLDKPLGLNGALQLAGMQFQGQQH 161
Query: 283 LGIDDTKNITRVLQRML 299
++D +N R+L +L
Sbjct: 162 RALEDARNTARLLPLIL 178
>gi|310641105|ref|YP_003945863.1| 3'-5' exonuclease [Paenibacillus polymyxa SC2]
gi|386040175|ref|YP_005959129.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
gi|309246055|gb|ADO55622.1| 3-5 exonuclease eri-1 [Paenibacillus polymyxa SC2]
gi|343096213|emb|CCC84422.1| exonuclease domain-containing protein 1 [Paenibacillus polymyxa M1]
Length = 177
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 20/122 (16%)
Query: 180 DTALPFKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLP 239
D A F + I +F+ W+ + + + G +D K+++ C++ +I+
Sbjct: 69 DMATYFPQAIYKFQEWIGKEPYY------------LCSWGFYD-KSQLKKDCELHKIR-- 113
Query: 240 PYFMEWI-NLKDVFYNFYKPRKSE-ATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQR 297
EWI N + + K ++ GM +K +P+ G+HH GIDD KNI+R+ +
Sbjct: 114 ---TEWIRNHISIKHQHGKLIGNDRGVGMERALKMLNLPLEGTHHRGIDDAKNISRIFVK 170
Query: 298 ML 299
+
Sbjct: 171 IF 172
>gi|313218688|emb|CBY43136.1| unnamed protein product [Oikopleura dioica]
Length = 181
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 25/131 (19%)
Query: 127 EILEFPVLMIDAKTMAFVDLFHRFVRPSKMSE--QHINKYIEGKYGKFGVDRVWHDTALP 184
EI EFP ++++ T + FH FV P + E K + ++
Sbjct: 56 EITEFPAVLVNLSTEEIISEFHEFVCPKESPELSDFCKKLTHLEKKDLSKEKT------- 108
Query: 185 FKEVIQQFEAWL----IQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPP 240
+EV+ FE W +H L+ F T +WD+ +++ + K +I++P
Sbjct: 109 LEEVMIDFELWTKDVQKEHDLY------------FYTPKDWDISSQLLSETKRKKIEIPE 156
Query: 241 YFMEWINLKDV 251
W++L+ V
Sbjct: 157 MLKSWVDLRAV 167
>gi|149603424|ref|XP_001513729.1| PREDICTED: ERI1 exoribonuclease 3-like, partial [Ornithorhynchus
anatinus]
Length = 85
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 96 SRDLQVDAAAFQHKCSQDLDFFLVLDLEGKI--------EILEFPVLMIDAKTMAFVDLF 147
S AA Q +FLVLD E EI+EFP+L ++ +TM F
Sbjct: 4 SHSFGAPMAAMSSFPPQRYHYFLVLDFEATCDKPQIHPQEIIEFPILKLNGRTMEIESTF 63
Query: 148 HRFVRP 153
H +V+P
Sbjct: 64 HMYVQP 69
>gi|156395505|ref|XP_001637151.1| predicted protein [Nematostella vectensis]
gi|156224261|gb|EDO45088.1| predicted protein [Nematostella vectensis]
Length = 151
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 260 KSEATGMMGMMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
K GM GM+ + + G HH GIDD +NIT++L + + T +
Sbjct: 100 KQSKIGMPGMLHGLGLELVGRHHSGIDDARNITKILVALARKHPNISATGK 150
>gi|449512637|ref|XP_004176175.1| PREDICTED: 3'-5' exoribonuclease 1-like [Taeniopygia guttata]
Length = 70
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 269 MMKNRQVPMFGSHHLGIDDTKNITRVLQRMLADGARVQITAR 310
M++N + G H G+DD+KNI R+ RML DG +++ R
Sbjct: 1 MLENLGMNYDGRPHSGLDDSKNIARIAIRMLQDGCDLRVNER 42
>gi|332707583|ref|ZP_08427616.1| putative exonuclease [Moorea producens 3L]
gi|332353646|gb|EGJ33153.1| putative exonuclease [Moorea producens 3L]
Length = 186
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 212 RAAFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMK 271
R +A+ G++D + + QC S+ P+ IN+K +F GM +
Sbjct: 96 RRVWASYGDYD-RNQFQKQC-TSRFLRYPFGTRHINIKTLFA--ISQALPHEVGMAQALD 151
Query: 272 NRQVPMFGSHHLGIDDTKNITRVLQRML 299
+P+ G+HH G DD NI R+ R+L
Sbjct: 152 LLNLPLEGTHHRGGDDAWNIARIFSRLL 179
>gi|268577631|ref|XP_002643798.1| Hypothetical protein CBG02010 [Caenorhabditis briggsae]
Length = 334
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 14/129 (10%)
Query: 127 EILEFPVLMIDAKTMAFVD--LFHRFVRPSKMSEQHINKYIEGKYGKFGVDRVWHDTALP 184
E+++ +++D K A + +F+ +V P S K E GV + + A
Sbjct: 65 EVIQISAVVVDVKNNAIRENMMFNEYVMPVINS-----KLTENCVKTTGVTQENVNNARS 119
Query: 185 FKEVIQQFEAWLIQHHLWEKGRGGHLKRAAFATCGNWDLKTKVPDQCKVSQIKLPPYFME 244
F+ V ++F WL + L ++AF D+ ++ QC + +++P F +
Sbjct: 120 FRIVNEKFSNWLESNQLVGV-------KSAFVMDSRVDIWQRLQYQCALIGVRMPARFRQ 172
Query: 245 WINLKDVFY 253
WINL V +
Sbjct: 173 WINLWTVCF 181
>gi|51091307|dbj|BAD36013.1| unknown protein [Oryza sativa Japonica Group]
gi|215700977|dbj|BAG92401.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 108
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 67 WRPMCLYFTQGKCTMMDDVMHLEKFN 92
W+P CLY+TQGKCTM+ +F
Sbjct: 78 WKPTCLYYTQGKCTMVGFSFPFSRFT 103
>gi|228982489|ref|ZP_04142748.1| Exonuclease [Bacillus thuringiensis Bt407]
gi|410678565|ref|YP_006930936.1| exonuclease [Bacillus thuringiensis Bt407]
gi|228776672|gb|EEM24980.1| Exonuclease [Bacillus thuringiensis Bt407]
gi|409177695|gb|AFV21999.1| exonuclease [Bacillus thuringiensis Bt407]
Length = 186
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 5/89 (5%)
Query: 214 AFATCGNWDLKTKVPDQCKVSQIKLPPYFMEWINLKDVFYNFYKPRKSEATGMMGMMKNR 273
FA+ G +D K + C+ + P + I+LK + + R GM +K
Sbjct: 96 VFASWGFYD-KKQFKQVCERFGVNYPFGHLH-ISLKHQHGTWTRQR---PMGMERALKMH 150
Query: 274 QVPMFGSHHLGIDDTKNITRVLQRMLADG 302
+P+ G HH GIDD +NI+++ M+ G
Sbjct: 151 HLPLEGIHHRGIDDARNISKIASHMIHSG 179
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,098,754,789
Number of Sequences: 23463169
Number of extensions: 201964698
Number of successful extensions: 767591
Number of sequences better than 100.0: 618
Number of HSP's better than 100.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 766130
Number of HSP's gapped (non-prelim): 711
length of query: 326
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 184
effective length of database: 9,027,425,369
effective search space: 1661046267896
effective search space used: 1661046267896
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)