Query 020420
Match_columns 326
No_of_seqs 269 out of 2018
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 09:36:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020420.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020420hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0372 Serine/threonine speci 100.0 1.6E-80 3.5E-85 554.0 16.7 287 6-300 3-290 (303)
2 PTZ00480 serine/threonine-prot 100.0 3.7E-77 8E-82 566.1 30.3 297 4-300 9-306 (320)
3 KOG0374 Serine/threonine speci 100.0 1.6E-77 3.5E-82 570.4 26.8 294 2-295 5-303 (331)
4 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 7.8E-76 1.7E-80 553.5 29.5 290 6-295 2-292 (293)
5 PTZ00244 serine/threonine-prot 100.0 8.8E-76 1.9E-80 552.8 28.4 291 4-294 2-293 (294)
6 cd07420 MPP_RdgC Drosophila me 100.0 2.9E-75 6.3E-80 553.8 30.5 283 2-292 3-320 (321)
7 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 7.1E-75 1.5E-79 545.0 28.0 283 6-296 2-285 (285)
8 PTZ00239 serine/threonine prot 100.0 6.7E-74 1.4E-78 541.8 28.5 285 6-298 3-289 (303)
9 smart00156 PP2Ac Protein phosp 100.0 7.7E-73 1.7E-77 528.6 29.2 270 26-295 1-270 (271)
10 cd07417 MPP_PP5_C PP5, C-termi 100.0 1.6E-72 3.5E-77 535.4 28.2 289 2-298 12-307 (316)
11 cd07416 MPP_PP2B PP2B, metallo 100.0 3.8E-72 8.3E-77 531.4 30.0 284 6-297 3-299 (305)
12 KOG0373 Serine/threonine speci 100.0 9.2E-73 2E-77 497.5 17.0 289 2-298 2-292 (306)
13 cd07419 MPP_Bsu1_C Arabidopsis 100.0 3.1E-71 6.7E-76 526.9 27.5 286 9-294 1-311 (311)
14 cd07418 MPP_PP7 PP7, metalloph 100.0 1.7E-68 3.7E-73 514.9 30.7 298 2-300 8-374 (377)
15 KOG0375 Serine-threonine phosp 100.0 2.6E-65 5.7E-70 476.3 11.5 270 25-295 60-342 (517)
16 KOG0371 Serine/threonine prote 100.0 3E-64 6.4E-69 452.3 11.9 295 6-312 20-315 (319)
17 KOG0377 Protein serine/threoni 100.0 9E-58 1.9E-62 434.5 14.3 269 24-293 132-430 (631)
18 KOG0376 Serine-threonine phosp 100.0 5.1E-50 1.1E-54 388.5 13.6 275 24-299 181-462 (476)
19 cd00144 MPP_PPP_family phospho 100.0 1.3E-36 2.7E-41 275.1 19.4 214 56-280 1-224 (225)
20 cd07425 MPP_Shelphs Shewanella 99.9 3.7E-26 7.9E-31 206.2 16.9 176 56-266 1-197 (208)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 6.2E-26 1.4E-30 209.5 15.6 121 53-176 1-146 (245)
22 PRK00166 apaH diadenosine tetr 99.9 4.4E-24 9.6E-29 200.0 18.1 218 53-285 1-262 (275)
23 cd07413 MPP_PA3087 Pseudomonas 99.9 7.7E-24 1.7E-28 192.9 16.6 115 56-173 2-143 (222)
24 cd07423 MPP_PrpE Bacillus subt 99.9 9.4E-24 2E-28 193.5 16.7 121 53-176 1-143 (234)
25 cd07422 MPP_ApaH Escherichia c 99.9 5.8E-24 1.3E-28 197.4 12.1 119 55-177 1-126 (257)
26 TIGR00668 apaH bis(5'-nucleosy 99.9 1.4E-23 2.9E-28 195.8 11.9 121 53-177 1-128 (279)
27 PRK11439 pphA serine/threonine 99.9 1.1E-22 2.4E-27 184.7 11.5 115 53-173 17-146 (218)
28 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.8E-21 3.8E-26 182.2 15.4 188 54-270 3-283 (304)
29 cd07424 MPP_PrpA_PrpB PrpA and 99.9 4.5E-22 9.8E-27 179.0 10.7 182 53-268 1-197 (207)
30 PHA02239 putative protein phos 99.9 2E-21 4.2E-26 178.5 12.6 174 53-268 1-221 (235)
31 PRK09968 serine/threonine-spec 99.8 2.7E-20 5.8E-25 169.1 10.2 115 53-173 15-144 (218)
32 PF00149 Metallophos: Calcineu 99.4 1.7E-12 3.7E-17 107.6 11.0 159 53-247 1-199 (200)
33 cd00841 MPP_YfcE Escherichia c 99.2 9.5E-10 2.1E-14 93.8 15.6 83 54-173 1-86 (155)
34 PF12850 Metallophos_2: Calcin 99.2 3.4E-10 7.4E-15 95.7 12.0 137 53-265 1-137 (156)
35 PRK09453 phosphodiesterase; Pr 99.1 2.8E-10 6.1E-15 100.2 8.6 69 53-125 1-77 (182)
36 TIGR00040 yfcE phosphoesterase 99.0 4E-09 8.7E-14 90.6 13.4 63 53-124 1-64 (158)
37 COG0639 ApaH Diadenosine tetra 99.0 2.9E-10 6.2E-15 94.2 4.9 142 127-269 4-154 (155)
38 cd07379 MPP_239FB Homo sapiens 99.0 5.6E-09 1.2E-13 87.4 10.6 118 54-252 1-120 (135)
39 cd07388 MPP_Tt1561 Thermus the 98.8 3.4E-08 7.4E-13 90.2 12.2 71 53-124 5-75 (224)
40 cd07397 MPP_DevT Myxococcus xa 98.8 3.1E-08 6.7E-13 91.1 11.5 156 54-248 2-208 (238)
41 cd00838 MPP_superfamily metall 98.8 5.6E-08 1.2E-12 78.2 11.3 117 56-252 1-119 (131)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.6 5.1E-07 1.1E-11 78.6 11.6 65 55-125 1-66 (188)
43 cd07394 MPP_Vps29 Homo sapiens 98.6 4E-06 8.6E-11 73.9 16.5 59 54-124 1-65 (178)
44 PRK05340 UDP-2,3-diacylglucosa 98.5 1.7E-06 3.7E-11 79.6 13.6 204 53-285 1-232 (241)
45 cd07404 MPP_MS158 Microscilla 98.5 6.1E-07 1.3E-11 77.5 8.9 67 55-124 1-68 (166)
46 cd07403 MPP_TTHA0053 Thermus t 98.4 2.2E-06 4.8E-11 71.5 10.6 107 56-252 1-107 (129)
47 cd07400 MPP_YydB Bacillus subt 98.3 1.5E-05 3.2E-10 66.9 12.3 117 55-252 1-129 (144)
48 cd07399 MPP_YvnB Bacillus subt 98.3 5.4E-05 1.2E-09 68.5 16.5 194 54-294 2-213 (214)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.2 7.3E-06 1.6E-10 75.0 10.3 205 55-284 1-229 (231)
50 COG0622 Predicted phosphoester 98.2 9.5E-05 2.1E-09 65.0 15.0 158 53-294 2-165 (172)
51 cd07385 MPP_YkuE_C Bacillus su 98.2 3.1E-06 6.7E-11 76.1 5.7 71 53-125 2-77 (223)
52 PRK11340 phosphodiesterase Yae 98.1 6.9E-06 1.5E-10 77.0 6.8 70 53-124 50-125 (271)
53 cd07383 MPP_Dcr2 Saccharomyces 98.0 0.0003 6.4E-09 62.6 15.9 70 53-122 3-87 (199)
54 TIGR03729 acc_ester putative p 97.9 2E-05 4.4E-10 72.2 6.5 68 54-124 1-74 (239)
55 cd07395 MPP_CSTP1 Homo sapiens 97.9 0.00039 8.4E-09 64.4 13.9 71 54-124 6-99 (262)
56 cd07396 MPP_Nbla03831 Homo sap 97.8 5.8E-05 1.3E-09 70.5 7.5 73 54-126 2-88 (267)
57 TIGR00619 sbcd exonuclease Sbc 97.8 6E-05 1.3E-09 70.1 7.0 72 53-124 1-88 (253)
58 KOG0376 Serine-threonine phosp 97.7 2.7E-06 5.9E-11 84.1 -3.5 239 24-270 13-299 (476)
59 PHA02546 47 endonuclease subun 97.7 8.6E-05 1.9E-09 72.0 6.9 72 53-124 1-89 (340)
60 cd07391 MPP_PF1019 Pyrococcus 97.6 0.00015 3.2E-09 63.2 7.3 57 68-124 30-88 (172)
61 cd07402 MPP_GpdQ Enterobacter 97.6 0.00017 3.6E-09 65.5 7.7 69 54-124 1-83 (240)
62 PRK04036 DNA polymerase II sma 97.6 0.00014 3E-09 74.2 7.8 113 53-172 244-388 (504)
63 COG2129 Predicted phosphoester 97.6 0.011 2.5E-07 53.7 18.2 206 52-284 3-217 (226)
64 cd08165 MPP_MPPE1 human MPPE1 97.5 0.00086 1.9E-08 57.8 10.4 47 79-125 38-90 (156)
65 cd00840 MPP_Mre11_N Mre11 nucl 97.5 0.0002 4.3E-09 64.0 6.3 74 54-127 1-92 (223)
66 PRK11148 cyclic 3',5'-adenosin 97.5 0.00027 5.9E-09 66.2 7.1 70 53-124 15-98 (275)
67 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.5 0.00025 5.3E-09 66.4 6.5 70 55-124 1-86 (262)
68 PRK10966 exonuclease subunit S 97.4 0.00036 7.8E-09 69.3 7.1 71 53-124 1-87 (407)
69 TIGR00024 SbcD_rel_arch putati 97.4 0.00057 1.2E-08 62.6 7.4 69 53-125 15-103 (225)
70 cd07390 MPP_AQ1575 Aquifex aeo 97.3 0.00042 9.1E-09 60.2 5.6 67 55-126 1-84 (168)
71 TIGR00583 mre11 DNA repair pro 97.3 0.0008 1.7E-08 66.8 7.7 73 53-125 4-124 (405)
72 COG1409 Icc Predicted phosphoh 97.2 0.0012 2.6E-08 61.0 8.1 73 53-127 1-81 (301)
73 cd07398 MPP_YbbF-LpxH Escheric 97.1 0.00076 1.7E-08 60.2 5.5 28 224-251 177-204 (217)
74 cd07393 MPP_DR1119 Deinococcus 97.1 0.0011 2.5E-08 60.5 6.3 43 224-268 181-226 (232)
75 cd07401 MPP_TMEM62_N Homo sapi 97.0 0.0015 3.3E-08 60.7 6.5 28 228-255 190-217 (256)
76 cd00839 MPP_PAPs purple acid p 96.9 0.0022 4.7E-08 60.2 6.7 70 53-126 5-83 (294)
77 cd07386 MPP_DNA_pol_II_small_a 96.7 0.0028 6E-08 58.3 5.4 68 56-125 2-95 (243)
78 cd07380 MPP_CWF19_N Schizosacc 96.4 0.0058 1.3E-07 52.5 5.4 119 56-247 1-121 (150)
79 COG1408 Predicted phosphohydro 96.4 0.0063 1.4E-07 57.7 6.0 71 54-126 46-120 (284)
80 cd07384 MPP_Cdc1_like Saccharo 96.4 0.0067 1.4E-07 53.1 5.8 47 79-125 45-101 (171)
81 cd08166 MPP_Cdc1_like_1 unchar 96.2 0.0087 1.9E-07 53.6 5.6 46 79-124 42-93 (195)
82 PF14582 Metallophos_3: Metall 96.1 0.024 5.1E-07 51.9 7.6 185 53-256 6-226 (255)
83 cd08163 MPP_Cdc1 Saccharomyces 96.0 0.082 1.8E-06 49.3 11.4 24 223-246 203-226 (257)
84 cd00845 MPP_UshA_N_like Escher 96.0 0.011 2.4E-07 54.2 5.1 66 54-124 2-82 (252)
85 COG0420 SbcD DNA repair exonuc 95.9 0.023 4.9E-07 55.9 7.3 73 53-125 1-89 (390)
86 COG2908 Uncharacterized protei 95.8 0.034 7.3E-07 51.1 7.4 198 56-286 1-229 (237)
87 cd08164 MPP_Ted1 Saccharomyces 95.4 0.033 7.3E-07 49.8 5.8 65 60-124 24-111 (193)
88 PLN02533 probable purple acid 95.4 0.02 4.4E-07 57.3 4.8 71 52-125 139-212 (427)
89 COG4186 Predicted phosphoester 95.2 0.1 2.2E-06 45.1 7.7 70 54-127 5-89 (186)
90 COG1311 HYS2 Archaeal DNA poly 94.9 0.32 6.9E-06 49.0 11.6 208 54-284 227-461 (481)
91 KOG3325 Membrane coat complex 94.9 0.28 6.2E-06 42.0 9.5 115 55-252 3-123 (183)
92 cd07410 MPP_CpdB_N Escherichia 94.9 0.037 8.1E-07 51.8 4.7 66 54-124 2-95 (277)
93 COG1407 Predicted ICC-like pho 94.6 0.13 2.8E-06 47.3 7.3 101 52-175 19-141 (235)
94 cd07378 MPP_ACP5 Homo sapiens 94.3 0.096 2.1E-06 48.6 6.0 70 54-124 2-83 (277)
95 cd07408 MPP_SA0022_N Staphyloc 93.5 0.1 2.2E-06 48.4 4.6 66 54-124 2-82 (257)
96 cd07412 MPP_YhcR_N Bacillus su 92.8 0.12 2.7E-06 48.7 4.1 66 54-124 2-88 (288)
97 PF08321 PPP5: PPP5 TPR repeat 91.4 0.52 1.1E-05 37.4 5.5 43 2-51 53-95 (95)
98 PF06874 FBPase_2: Firmicute f 91.2 0.15 3.3E-06 52.7 2.8 65 224-290 507-581 (640)
99 cd07411 MPP_SoxB_N Thermus the 90.4 0.4 8.6E-06 44.6 4.6 65 54-124 2-95 (264)
100 COG1768 Predicted phosphohydro 90.1 0.57 1.2E-05 41.5 5.0 73 79-162 43-117 (230)
101 KOG3662 Cell division control 90.0 0.6 1.3E-05 46.4 5.7 56 68-123 81-143 (410)
102 cd00842 MPP_ASMase acid sphing 89.4 0.7 1.5E-05 43.4 5.6 72 55-127 40-125 (296)
103 cd07387 MPP_PolD2_C PolD2 (DNA 89.3 9.1 0.0002 35.8 12.7 48 237-289 204-254 (257)
104 PRK09419 bifunctional 2',3'-cy 88.6 0.52 1.1E-05 53.0 4.6 66 54-124 662-736 (1163)
105 KOG2863 RNA lariat debranching 88.0 1.4 3.1E-05 42.9 6.5 73 53-125 1-89 (456)
106 TIGR00282 metallophosphoestera 87.6 1 2.3E-05 42.3 5.3 67 53-124 1-71 (266)
107 KOG1432 Predicted DNA repair e 87.3 2.2 4.7E-05 41.5 7.3 71 54-125 55-148 (379)
108 KOG0918 Selenium-binding prote 87.3 0.016 3.5E-07 56.7 -7.1 193 80-284 48-250 (476)
109 cd07409 MPP_CD73_N CD73 ecto-5 87.2 0.91 2E-05 42.7 4.7 66 54-124 2-94 (281)
110 cd07406 MPP_CG11883_N Drosophi 86.3 1.3 2.8E-05 41.0 5.2 56 63-123 21-82 (257)
111 PF04042 DNA_pol_E_B: DNA poly 84.7 1.4 3.1E-05 39.1 4.5 72 55-126 1-93 (209)
112 KOG2476 Uncharacterized conser 83.9 2 4.3E-05 43.1 5.4 69 52-121 5-75 (528)
113 cd07405 MPP_UshA_N Escherichia 83.6 1.4 3.1E-05 41.5 4.2 66 54-124 2-87 (285)
114 KOG3339 Predicted glycosyltran 81.8 10 0.00022 33.8 8.4 87 81-172 40-143 (211)
115 cd07407 MPP_YHR202W_N Saccharo 81.7 1.7 3.8E-05 41.0 4.0 66 54-124 7-97 (282)
116 COG0737 UshA 5'-nucleotidase/2 81.7 1.8 4E-05 44.2 4.5 68 52-124 26-115 (517)
117 COG3855 Fbp Uncharacterized pr 81.4 1.7 3.7E-05 43.7 3.9 41 81-126 192-232 (648)
118 cd07382 MPP_DR1281 Deinococcus 79.1 4.7 0.0001 37.6 5.9 66 54-124 1-70 (255)
119 cd08162 MPP_PhoA_N Synechococc 79.0 3 6.4E-05 40.1 4.6 66 54-124 2-91 (313)
120 PRK09420 cpdB bifunctional 2', 76.9 3.2 7E-05 43.9 4.6 69 51-124 24-122 (649)
121 TIGR01390 CycNucDiestase 2',3' 76.9 3 6.6E-05 43.9 4.4 67 53-124 3-99 (626)
122 PRK09419 bifunctional 2',3'-cy 75.5 3.4 7.4E-05 46.6 4.6 67 53-124 42-139 (1163)
123 KOG3947 Phosphoesterases [Gene 71.7 4.9 0.00011 38.0 3.8 65 53-125 62-127 (305)
124 PRK11907 bifunctional 2',3'-cy 69.2 6.3 0.00014 42.8 4.6 68 52-124 115-213 (814)
125 PTZ00235 DNA polymerase epsilo 69.0 17 0.00036 34.7 6.8 73 53-125 28-123 (291)
126 PF14164 YqzH: YqzH-like prote 65.8 24 0.00052 25.9 5.6 47 1-47 1-47 (64)
127 PTZ00422 glideosome-associated 63.3 14 0.00029 36.9 5.3 72 53-124 27-109 (394)
128 TIGR01530 nadN NAD pyrophospha 63.2 12 0.00026 38.8 5.2 65 55-124 3-94 (550)
129 PRK09558 ushA bifunctional UDP 59.4 13 0.00029 38.3 4.7 68 52-124 34-121 (551)
130 PRK09418 bifunctional 2',3'-cy 54.4 16 0.00034 39.7 4.3 67 52-123 39-141 (780)
131 KOG2310 DNA repair exonuclease 49.4 52 0.0011 34.1 6.8 54 53-106 14-79 (646)
132 PF02875 Mur_ligase_C: Mur lig 46.0 58 0.0012 24.7 5.3 71 51-121 10-82 (91)
133 PF06874 FBPase_2: Firmicute f 44.7 17 0.00037 38.1 2.6 39 82-125 187-225 (640)
134 KOG1378 Purple acid phosphatas 42.8 40 0.00086 34.1 4.8 33 227-259 323-355 (452)
135 PHA02580 8 baseplate wedge sub 40.8 1.7E+02 0.0036 27.8 8.1 83 236-319 85-174 (331)
136 PF12641 Flavodoxin_3: Flavodo 40.6 1.2E+02 0.0025 26.2 6.9 102 56-176 2-116 (160)
137 PF15007 CEP44: Centrosomal sp 39.1 19 0.00041 30.3 1.6 85 60-158 1-87 (131)
138 PF13258 DUF4049: Domain of un 37.2 78 0.0017 29.5 5.4 58 111-175 127-187 (318)
139 PF09949 DUF2183: Uncharacteri 28.1 1.6E+02 0.0035 23.3 5.3 44 65-117 52-95 (100)
140 PRK10773 murF UDP-N-acetylmura 27.7 3.4E+02 0.0074 27.1 8.9 66 53-119 325-392 (453)
141 PF09637 Med18: Med18 protein; 27.2 1.2E+02 0.0026 28.1 5.0 39 224-265 139-177 (250)
142 cd07381 MPP_CapA CapA and rela 24.0 1.4E+02 0.003 26.9 4.8 39 228-268 199-237 (239)
143 COG3918 Predicted membrane pro 22.7 36 0.00078 28.2 0.6 22 304-325 59-80 (153)
144 PF09587 PGA_cap: Bacterial ca 21.7 1.7E+02 0.0037 26.6 5.0 40 228-269 208-247 (250)
145 PLN02965 Probable pheophorbida 20.9 1.2E+02 0.0026 27.1 3.8 21 226-246 59-81 (255)
146 smart00854 PGA_cap Bacterial c 20.3 1.7E+02 0.0038 26.4 4.7 39 229-269 198-236 (239)
No 1
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-80 Score=554.04 Aligned_cols=287 Identities=47% Similarity=0.955 Sum_probs=274.9
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceee
Q 020420 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLF 85 (326)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vf 85 (326)
++..|++|.+.+ .+.++++..||.+++++|.+|+++++++.|++|+||||||+.||..+|+..|-++.++|+|
T Consensus 3 ldr~ie~L~~~~-------li~E~eV~~LC~~~~eiL~~E~NV~~i~tPvtvcGDIHGQf~Dllelf~igG~~~~t~YLF 75 (303)
T KOG0372|consen 3 LDRQIEQLRRCE-------LIAESEVKALCAKVREILVEESNVQRIDTPVTVCGDIHGQFYDLLELFRIGGDVPETNYLF 75 (303)
T ss_pred HHHHHHHHHhcC-------CCcHHHHHHHHHHHHHHHhcCCCceecCCCcEEeecccchHHHHHHHHHhCCCCCCCceEe
Confidence 567888887654 6789999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhc-hhHHHHHHHHhccCCcEEEEcCc
Q 020420 86 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALIDEK 164 (326)
Q Consensus 86 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~ 164 (326)
||||||||-+|+|++.+|++||++||+++.+||||||++.++..|||++||.++|+ ..+|+.+.+.|++||++|+|+++
T Consensus 76 LGDyVDRG~~SvEt~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~~vWr~c~eiFdyL~l~aiid~k 155 (303)
T KOG0372|consen 76 LGDYVDRGYYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSANVWRYCTEIFDYLSLAAIIDGK 155 (303)
T ss_pred ecchhccccchHHHHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCChHHHHHHHHHHHhhhHhheecCc
Confidence 99999999999999999999999999999999999999999999999999999996 57999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEee
Q 020420 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (326)
Q Consensus 165 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH 244 (326)
+||||||+||.+.+++||+.+.|..++|..+.++|+|||||.+. .+|+-++||+|+.||.++++.|++.||+++|+|+|
T Consensus 156 ifCVHGGlSP~i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~-~g~~~SPRGaGylFG~dvv~~F~~~N~~~~I~RaH 234 (303)
T KOG0372|consen 156 IFCVHGGLSPSIQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEG-PGWGLSPRGAGYLFGEDVVESFLEANGLSLICRAH 234 (303)
T ss_pred EEEEcCCCCcchhhHHHHHHhhccccCCCCCcchheeccCcccC-CCcccCCCCccccccHHHHHHHHHhCChHHHHHHH
Confidence 99999999999999999999999999999999999999999864 79999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCCCC
Q 020420 245 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPK 300 (326)
Q Consensus 245 ~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 300 (326)
|.+.+||++.++++++|||||||||+..+|.||||.++++....|.+|+..+...+
T Consensus 235 QLv~eGyk~~F~~~v~TVWSAPNYCYrCGN~AsIl~lde~~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 235 QLVMEGYKWHFDEKVVTVWSAPNYCYRCGNVAAILELDEDLDKDFRVFEAAPQESR 290 (303)
T ss_pred HHHHhhHHHhcCCceEEEecCCchhhhcCChHHheeeccccCcceEeeecchhhhc
Confidence 99999999999999999999999999999999999999999999999987654443
No 2
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=3.7e-77 Score=566.13 Aligned_cols=297 Identities=75% Similarity=1.387 Sum_probs=283.6
Q ss_pred hHHHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCc
Q 020420 4 AVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSN 82 (326)
Q Consensus 4 ~~~~~~i~~l~~~~-~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~ 82 (326)
..++.+|+++++.+ ..++....|+++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.++
T Consensus 9 ~~~~~~i~~~~~~~~~~~~~~~~l~~~~i~~l~~~~~~il~~ep~ll~i~~~i~vvGDIHG~~~dL~~l~~~~g~~~~~~ 88 (320)
T PTZ00480 9 IDVDNIIERLLSVRGSKPGKNVNLTEAEVRGLCIKARDIFISQPILLELEAPLKICGDVHGQYFDLLRLFEYGGYPPESN 88 (320)
T ss_pred cCHHHHHHHHHhccccCccccCCCCHHHHHHHHHHHHHHHHhCCceEecCCCeEEEeecccCHHHHHHHHHhcCCCCcce
Confidence 45888999999876 33455668999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEc
Q 020420 83 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID 162 (326)
Q Consensus 83 ~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~ 162 (326)
|||||||||||++|+|++.+++++|+.+|.++++||||||...++..|||..|+..+|+..+|..+.++|++||+||+++
T Consensus 89 ylfLGDyVDRG~~s~evl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~~~l~~~~~~~F~~LPlaAiI~ 168 (320)
T PTZ00480 89 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLPVAALID 168 (320)
T ss_pred EEEeceecCCCCCcHHHHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcCHHHHHHHHHHHHhccHhheec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEE
Q 020420 163 EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICR 242 (326)
Q Consensus 163 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIR 242 (326)
+++|||||||+|.+.++++|++++||.+.++.+++.|+|||||.....+|.+|+||.|++||++++++||++|++++|||
T Consensus 169 ~~i~cvHGGI~p~~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR 248 (320)
T PTZ00480 169 EKILCMHGGLSPELSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICR 248 (320)
T ss_pred CcEEEEcCCcCcccCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEE
Confidence 99999999999999999999999999999999999999999999877899999999999999999999999999999999
Q ss_pred eeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCCCC
Q 020420 243 AHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPK 300 (326)
Q Consensus 243 gH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~ 300 (326)
|||++++||+++++++|+|||||||||+..+|+||+|.|++++.++|++++|.+....
T Consensus 249 ~Hq~v~~G~~~~~~~~~iTvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~~~ 306 (320)
T PTZ00480 249 AHQVVEDGYEFFSKRQLVTLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQGQG 306 (320)
T ss_pred cCccccCceEEeCCCcEEEEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccccc
Confidence 9999999999999999999999999999999999999999999999999998766543
No 3
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=1.6e-77 Score=570.42 Aligned_cols=294 Identities=70% Similarity=1.254 Sum_probs=281.4
Q ss_pred ChhHHHHHHHHHHhccC---CCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCC-C
Q 020420 2 DPAVLDGVIRRLLEVRG---KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGG-L 77 (326)
Q Consensus 2 ~~~~~~~~i~~l~~~~~---~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g-~ 77 (326)
....+.++|.+++.... .......++.+++.+||..+.++|..+|+++++++||.|+||||||+.||.++|...| +
T Consensus 5 ~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ei~~l~~~~~~if~~~~~l~e~~aPV~i~GDiHGq~~DLlrlf~~~g~~ 84 (331)
T KOG0374|consen 5 ASLDLDELIRKLLSVGNKKTEKKRQVPLSKSEIIKLCDKAREIFLSQPTLLELSAPVKIVGDIHGQFGDLLRLFDLLGSF 84 (331)
T ss_pred chhhHHHHHHHHhhccccCCCcccceeccHHHHHHHHHHHHHHhcCCCceeecCCCEEEEccCcCCHHHHHHHHHhcCCC
Confidence 34567788888888763 1122456999999999999999999999999999999999999999999999999999 9
Q ss_pred CCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhc-hhHHHHHHHHhccCC
Q 020420 78 PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLP 156 (326)
Q Consensus 78 ~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LP 156 (326)
|+.++|||||||||||++|+|++.+|+++|++||+++++||||||++.++..|||++||.++|+ ..+|..+++.|..||
T Consensus 85 pp~~~ylFLGDYVDRG~~slE~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~~~~w~~F~~~f~~mp 164 (331)
T KOG0374|consen 85 PPDQNYVFLGDYVDRGKQSLETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGEIKLWKAFNDAFNCLP 164 (331)
T ss_pred CCcccEEEecccccCCccceEEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcchHHHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred cEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCC
Q 020420 157 VAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD 236 (326)
Q Consensus 157 laa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~ 236 (326)
++|+|+++++|+|||++|.+.++++|+.|.||.+.++.++++|++||||.....+|.+|.||.++.||++++++||++++
T Consensus 165 ~~a~i~~kI~CmhGGlsp~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n~Rg~s~~fg~~~v~~f~~~~~ 244 (331)
T KOG0374|consen 165 LAALIDGKILCMHGGLSPHLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEENDRGVSFTFGPAVVEDFCKKLD 244 (331)
T ss_pred hhheecceEEEecCCCChhhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccCCCceeeEecHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred CceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020420 237 LELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (326)
Q Consensus 237 l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 295 (326)
+++||||||++++||+++.+++++||||||+|||.++|+||+|.|++++.++|++++|.
T Consensus 245 ldlivRaHqvv~dGyeffa~r~lvTIFSAP~Ycg~~~n~gavm~Vd~~l~~sf~~l~p~ 303 (331)
T KOG0374|consen 245 LDLIVRAHQVVEDGYEFFAGRKLVTIFSAPNYCGEFDNAGAVMRVDKNLKCSFVILRPE 303 (331)
T ss_pred cceEEEcCccccccceEecCceEEEEecCchhccccCCceEEEEECCCCeEEEEEeccc
Confidence 99999999999999999999999999999999999999999999999999999999995
No 4
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=7.8e-76 Score=553.50 Aligned_cols=290 Identities=81% Similarity=1.448 Sum_probs=278.5
Q ss_pred HHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCcee
Q 020420 6 LDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYL 84 (326)
Q Consensus 6 ~~~~i~~l~~~~-~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~v 84 (326)
++.+|+++++.+ ...+....|+++++.+||++|+++|++||++++++.+++||||||||+.+|.++|+..++++.+++|
T Consensus 2 ~~~~i~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~ep~~l~i~~~i~viGDIHG~~~~L~~l~~~~~~~~~~~~l 81 (293)
T cd07414 2 IDSIIERLLEVRGSRPGKNVQLTEAEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYL 81 (293)
T ss_pred HHHHHHHHHhccccCCcccCCCCHHHHHHHHHHHHHHHHhCCCeEecCCceEEEEecCCCHHHHHHHHHhcCCCCcceEE
Confidence 577899999866 3345667899999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCc
Q 020420 85 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEK 164 (326)
Q Consensus 85 fLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~ 164 (326)
|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+..+|..+.++|++||++|+++++
T Consensus 82 fLGDyVDRG~~s~e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaa~i~~~ 161 (293)
T cd07414 82 FLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPVAAIIDEK 161 (293)
T ss_pred EEeeEecCCCCcHHHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhhHHHHHHHHHHHHHhHHHHhhCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEee
Q 020420 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (326)
Q Consensus 165 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH 244 (326)
++|||||++|.+.++++|++++||.+.++.+++.|+|||||.....+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 162 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 241 (293)
T cd07414 162 IFCMHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGKDVVAKFLNKHDLDLICRAH 241 (293)
T ss_pred EEEEccCCCcccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCccCCCCcceecCHHHHHHHHHHcCCeEEEECC
Confidence 99999999999999999999999999999999999999999987889999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020420 245 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (326)
Q Consensus 245 ~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 295 (326)
|++++||+++++++||||||||||||..+|+||+|.|+++++++|++++|.
T Consensus 242 e~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~~~~~~~~ 292 (293)
T cd07414 242 QVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 292 (293)
T ss_pred ccccCeEEEeCCCcEEEEecCCcccCCCCceEEEEEECCCCcEEEEEecCC
Confidence 999999999999999999999999999999999999999999999999875
No 5
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=8.8e-76 Score=552.80 Aligned_cols=291 Identities=57% Similarity=1.124 Sum_probs=277.5
Q ss_pred hHHHHHHHHHHhcc-CCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCc
Q 020420 4 AVLDGVIRRLLEVR-GKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSN 82 (326)
Q Consensus 4 ~~~~~~i~~l~~~~-~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~ 82 (326)
.-++.+|+++++.. ...+....++.+++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.++
T Consensus 2 ~~~~~~i~~~~~~~~~~~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~p~~ViGDIHG~~~~L~~l~~~~~~~~~~~ 81 (294)
T PTZ00244 2 SLVQTLIEKMLTVKGNRTQRQILIREEDIRAVLTEVREIFMSQPMLLEIRPPVRVCGDTHGQYYDLLRIFEKCGFPPYSN 81 (294)
T ss_pred chHHHHHHHHHhcccCCCccccCCCHHHHHHHHHHHHHHHHhCCCeEeccCCceeeccCCCCHHHHHHHHHHcCCCCccc
Confidence 45688999999866 33345667999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEc
Q 020420 83 YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALID 162 (326)
Q Consensus 83 ~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~ 162 (326)
++|||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+++..+|+..+|..+.++|+.||++|+++
T Consensus 82 ~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~~~l~~~~~~~f~~lPlaaii~ 161 (294)
T PTZ00244 82 YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYNIKLFKAFTDVFNTMPVCCVIS 161 (294)
T ss_pred EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhhHHHHHHHHHHHHhCchheEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEE
Q 020420 163 EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICR 242 (326)
Q Consensus 163 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIR 242 (326)
++++|||||++|.+.+++++++++||.+.++.+++.|+|||||.....+|.+++||.|+.||++++++||++||+++|||
T Consensus 162 ~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR 241 (294)
T PTZ00244 162 EKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLESDRGVSYLFGEDIVNDFLDMVDMDLIVR 241 (294)
T ss_pred CeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCcCCCCCccccCHHHHHHHHHHcCCcEEEE
Confidence 99999999999999999999999999999999999999999999877899999999999999999999999999999999
Q ss_pred eeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEecc
Q 020420 243 AHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 294 (326)
Q Consensus 243 gH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~ 294 (326)
|||++++||+++++++|+||||||||||..+|+||+|.|++++.++|.+++.
T Consensus 242 ~Hq~~~~G~~~~~~~~~iTvfSa~~Y~~~~~N~~a~l~i~~~~~~~f~~~~~ 293 (294)
T PTZ00244 242 AHQVMERGYGFFASRQLVTVFSAPNYCGEFDNDAAVMNIDDKLQCSFLIIPA 293 (294)
T ss_pred cCccccCceEEcCCCeEEEEeCCccccCCCCceEEEEEECCCCcEeEEEeec
Confidence 9999999999999999999999999999999999999999999999988753
No 6
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=2.9e-75 Score=553.79 Aligned_cols=283 Identities=35% Similarity=0.627 Sum_probs=259.7
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEeCCCCCHHHHHHHHHhCCC
Q 020420 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKICGDIHGQYSDLLRLFEYGGL 77 (326)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~----~i~ViGDIHG~~~~L~~ll~~~g~ 77 (326)
+.+.++.+|+++++.. .|+++++.+||++|+++|++||++++++. |++||||||||+.+|.++|+..|+
T Consensus 3 ~~~~~~~~i~~~~~~~-------~l~~~~i~~L~~~a~~il~~ep~vl~i~~~~~~~~~vvGDiHG~~~dL~~il~~~g~ 75 (321)
T cd07420 3 TKDHIDALIEAFKEKQ-------LLHAKYVLLILREARKVLKQLPNISRVSTSISKQVTICGDLHGKLDDLFLIFYKNGL 75 (321)
T ss_pred CHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCeEEEEeCCCCHHHHHHHHHHcCC
Confidence 5678999999998643 68899999999999999999999999976 899999999999999999999999
Q ss_pred CC-CCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhc---hhHHHHHHHHhc
Q 020420 78 PP-RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN---VRLWKIFTDCFN 153 (326)
Q Consensus 78 ~~-~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~---~~~~~~~~~~f~ 153 (326)
++ .++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+ ..+|+.+.++|+
T Consensus 76 ~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~~~~F~ 155 (321)
T cd07420 76 PSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLLEDVFS 155 (321)
T ss_pred CCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHHHHHHH
Confidence 85 46799999999999999999999999999999999999999999999999999999999997 689999999999
Q ss_pred cCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCC-----CCC----------------------chhHHHHhhcCCC
Q 020420 154 CLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTD-----VPE----------------------SGLLCDLLWSDPS 206 (326)
Q Consensus 154 ~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~-----~~~----------------------~~~~~dlLWsDP~ 206 (326)
.||+||++++++|||||||+| ..++++|++|+|+.. .|. .+++.|+|||||.
T Consensus 156 ~LPlaaii~~~i~cvHGGi~~-~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLWSDP~ 234 (321)
T cd07420 156 WLPLATIIDNKILVVHGGISD-STDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILWSDPK 234 (321)
T ss_pred hCCceEEEcCCEEEEeCCCCC-ccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeeecCCc
Confidence 999999999999999999996 578999999887421 011 1478899999999
Q ss_pred CCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcc
Q 020420 207 NDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLM 286 (326)
Q Consensus 207 ~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~ 286 (326)
.....|.+++||.|+.||++++++||++|++++||||||++++||++.++++|+|||||||||+..+|+||+|.|++++.
T Consensus 235 ~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~v~~G~~~~~~~~~iTvFSa~nY~~~~~N~gavl~i~~~~~ 314 (321)
T cd07420 235 AQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHECKPEGYEFCHNNKVITIFSASNYYEEGSNRGAYIKLGPDLT 314 (321)
T ss_pred cCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChhhhcceEEecCCeEEEEecCCccCCCCCccEEEEEECCCCc
Confidence 65555777789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEe
Q 020420 287 CSFQIL 292 (326)
Q Consensus 287 ~~~~~~ 292 (326)
++|+++
T Consensus 315 ~~f~~~ 320 (321)
T cd07420 315 PHFVQY 320 (321)
T ss_pred eeEEEe
Confidence 888765
No 7
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=7.1e-75 Score=545.04 Aligned_cols=283 Identities=50% Similarity=0.982 Sum_probs=271.1
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceee
Q 020420 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLF 85 (326)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vf 85 (326)
++++|+++++.. .++++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..++++.+++||
T Consensus 2 ~~~~~~~~~~~~-------~l~~~~~~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lf 74 (285)
T cd07415 2 LDKWIEQLKKCE-------LLPESEVKSLCEKAKEILVKESNVQRVRSPVTVCGDIHGQFYDLLELFRVGGDPPDTNYLF 74 (285)
T ss_pred HHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCEEecCCCEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEE
Confidence 577888887543 6899999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhch-hHHHHHHHHhccCCcEEEEcCc
Q 020420 86 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALIDEK 164 (326)
Q Consensus 86 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaa~i~~~ 164 (326)
||||||||++|+|++.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|..+.++|++||++|+++++
T Consensus 75 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~~~l~~~~~~~f~~lPlaaii~~~ 154 (285)
T cd07415 75 LGDYVDRGYYSVETFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGNANVWKYCTDLFDYLPLAALIDNQ 154 (285)
T ss_pred EeEECCCCcCHHHHHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCchHHHHHHHHHHHHhHHHhEeCCe
Confidence 999999999999999999999999999999999999999999999999999999974 8999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEee
Q 020420 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (326)
Q Consensus 165 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH 244 (326)
++||||||+|.+.++++|++++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 155 i~cvHgGi~p~~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 233 (285)
T cd07415 155 IFCVHGGLSPSIDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDI-EGWGISPRGAGYLFGQDVVEEFNHNNGLTLICRAH 233 (285)
T ss_pred EEEEcCCCCCCcccHHHhhcccCCCCCCCCCCccceEecCCCcc-CCCCcCCCCCccccCHHHHHHHHHHCCCeEEEEcC
Confidence 99999999999999999999999999999999999999999964 78999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCC
Q 020420 245 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPAD 296 (326)
Q Consensus 245 ~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~ 296 (326)
|++++||++.++++|+|||||||||+..+|+||+|.|+++++++|.+++|.+
T Consensus 234 e~~~~G~~~~~~~~~~TvfSa~~y~~~~~n~~a~l~i~~~~~~~~~~~~~~~ 285 (285)
T cd07415 234 QLVMEGYQWMFDDKLVTVWSAPNYCYRCGNVASIMELDEHLKRSFKVFEAAP 285 (285)
T ss_pred ccccceEEEecCCcEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeccCC
Confidence 9999999999999999999999999999999999999999999999998753
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=6.7e-74 Score=541.76 Aligned_cols=285 Identities=46% Similarity=0.931 Sum_probs=270.6
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceee
Q 020420 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLF 85 (326)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vf 85 (326)
++.+|+++.+.. .|+++++.+||++|+++|++||++++++.|++|+||||||+.+|.++|+..+.++.++++|
T Consensus 3 ~~~~~~~~~~~~-------~l~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDIHG~~~~L~~l~~~~~~~~~~~~lf 75 (303)
T PTZ00239 3 IDRHIATLLNGG-------CLPERDLKLICERAKEIFLEESNVQPVRAPVNVCGDIHGQFYDLQALFKEGGDIPNANYIF 75 (303)
T ss_pred HHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCCeEecCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEE
Confidence 677888887543 6889999999999999999999999999999999999999999999999999988999999
Q ss_pred ecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhch-hHHHHHHHHhccCCcEEEEcCc
Q 020420 86 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV-RLWKIFTDCFNCLPVAALIDEK 164 (326)
Q Consensus 86 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~-~~~~~~~~~f~~LPlaa~i~~~ 164 (326)
||||||||++|+|++.+|+++|+.+|.++++||||||.+.++..|||.+|+..+|+. .+|+.+.++|++||++|+++++
T Consensus 76 LGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~~~~~~~~~~f~~LPlaaii~~~ 155 (303)
T PTZ00239 76 IGDFVDRGYNSVETMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNSNPWRLFMDVFDCLPLAALIEGQ 155 (303)
T ss_pred eeeEcCCCCCHHHHHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcChhHHHHHHHHHHhCchheEEcCe
Confidence 999999999999999999999999999999999999999999999999999999974 7899999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEee
Q 020420 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (326)
Q Consensus 165 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH 244 (326)
++|||||++|.+.++++|++++||.+.|..+.++|+|||||.. ..+|.+|+||.|+.||++++++||++||+++|||||
T Consensus 156 i~cvHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~-~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~H 234 (303)
T PTZ00239 156 ILCVHGGLSPDMRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEE-VEYWAVNSRGAGYLFGAKVTKEFCRLNDLTLICRAH 234 (303)
T ss_pred EEEEcCccCcccccHhhhccccCCCCCCCCCCceeeEecCccc-cCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcC
Confidence 9999999999999999999999999999999999999999984 578999999999999999999999999999999999
Q ss_pred eeeccceEEecC-CeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020420 245 QVVEDGYEFFAN-RRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 298 (326)
Q Consensus 245 ~~~~~G~~~~~~-~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 298 (326)
|++++||++.++ ++|+|||||||||+..+|+||+|.+++++++.|.+++|.+.+
T Consensus 235 e~~~~G~~~~~~~~~~iTvfSa~~Y~~~~~N~~ail~i~~~~~~~~~~~~~~~~~ 289 (303)
T PTZ00239 235 QLVMEGYKYWFPDQNLVTVWSAPNYCYRCGNIASILCLDENLQQTWKTFKEVPES 289 (303)
T ss_pred hhhccceEEEeCCCeEEEEECCCcccCCCCceEEEEEECCCCcEeeEEeeCCCcc
Confidence 999999998765 459999999999999999999999999999999999997765
No 9
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=7.7e-73 Score=528.61 Aligned_cols=270 Identities=58% Similarity=1.072 Sum_probs=262.1
Q ss_pred CCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHH
Q 020420 26 LSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLA 105 (326)
Q Consensus 26 l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~ 105 (326)
++++++.+||++|+++|++||+++++++|++||||||||+.+|.++|+..+.++.+++||||||||||++|+|++.++++
T Consensus 1 ~~~~~i~~l~~~~~~il~~e~~~~~i~~~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s~e~l~~l~~ 80 (271)
T smart00156 1 LYAEEILELLREVKEIFRQEPNLVEVSAPVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFSIEVILLLFA 80 (271)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCeEEeCCCEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCChHHHHHHHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccC
Q 020420 106 YKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSL 185 (326)
Q Consensus 106 lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i 185 (326)
+|+.+|.++++||||||.+.++..|||.+|+..+|+.++|+.+.++|++||++|+++++++|||||++|.+.++++|+++
T Consensus 81 lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~~l~~i~~i 160 (271)
T smart00156 81 LKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYGEEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLTTLDDIRKL 160 (271)
T ss_pred HHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcCHHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccCCHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecC
Q 020420 186 PRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (326)
Q Consensus 186 ~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 265 (326)
+||.+.+..++++|+|||||.....+|.+|+||.|+.||++++++||++||+++||||||++++||+++++++|+|||||
T Consensus 161 ~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~~~~G~~~~~~~~~~TvfSa 240 (271)
T smart00156 161 KRPQEPPDEGLLIDLLWSDPDQPVDGFQPSIRGASYYFGPDAVDEFLKKNNLKLIIRAHQVVDDGYEFFHDRKLVTIFSA 240 (271)
T ss_pred cCCCCCCchhhhhheeecCCCcccCCCccCCCCCccccCHHHHHHHHHHCCCeEEEecCcccCCcEEEecCCcEEEEECC
Confidence 99999999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020420 266 PNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (326)
Q Consensus 266 ~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 295 (326)
||||+..+|+||++.|+++.+++|.+++|.
T Consensus 241 ~~y~~~~~n~~a~~~i~~~~~~~~~~~~~~ 270 (271)
T smart00156 241 PNYCGRFGNKAAVLKVDKDLKLSFEQFKPG 270 (271)
T ss_pred cccccCCCceEEEEEECCCCcEEEEEecCC
Confidence 999998899999999999999999998874
No 10
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=1.6e-72 Score=535.44 Aligned_cols=289 Identities=41% Similarity=0.784 Sum_probs=270.0
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCc----EEEEeCCCCCHHHHHHHHHhCCC
Q 020420 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAP----IKICGDIHGQYSDLLRLFEYGGL 77 (326)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~----i~ViGDIHG~~~~L~~ll~~~g~ 77 (326)
+.+.++++++++.... .|+++++.+||.+|+++|++||++++++.| ++||||||||+.+|.++|+..++
T Consensus 12 ~~~~~~~~~~~~~~~~-------~l~~~~~~~l~~~~~~il~~ep~l~~i~~p~~~~~~VvGDIHG~~~dL~~ll~~~g~ 84 (316)
T cd07417 12 TLEFVKEMIEWFKDQK-------KLHKKYAYQILLQVKELLKKLPSLVEITIPEGEKITVCGDTHGQFYDLLNIFELNGL 84 (316)
T ss_pred CHHHHHHHHHHHHccC-------CCCHHHHHHHHHHHHHHHHhCCcceeccCCCCceeEEeecccCCHHHHHHHHHhcCC
Confidence 4567888888887543 688999999999999999999999999865 99999999999999999999998
Q ss_pred CCC-CceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCC
Q 020420 78 PPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP 156 (326)
Q Consensus 78 ~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP 156 (326)
++. +++||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|++||
T Consensus 85 ~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~~~~l~~~~~~~f~~LP 164 (316)
T cd07417 85 PSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKYNEQMFDLFSEVFNWLP 164 (316)
T ss_pred CCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcccHHHHHHHHHHHHhch
Confidence 765 4699999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEcCcEEEecCCC-CCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhC
Q 020420 157 VAALIDEKILCMHGGL-SPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKH 235 (326)
Q Consensus 157 laa~i~~~il~vHgGi-~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~ 235 (326)
++++++++++|||||+ ++...+++++++++||.+.+..+++.|+|||||... .+|.+|+||.|+.||++++++||++|
T Consensus 165 laaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~-~~~~~s~Rg~g~~fg~~~~~~Fl~~n 243 (316)
T cd07417 165 LAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQ-PGRSPSKRGVGCQFGPDVTKRFLEEN 243 (316)
T ss_pred HhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCC-CCCCccCCCCceEeCHHHHHHHHHHc
Confidence 9999999999999999 567889999999999988888999999999999864 68999999999999999999999999
Q ss_pred CCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcC-CcceEEEEeccCCCC
Q 020420 236 DLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDE-TLMCSFQILKPADKK 298 (326)
Q Consensus 236 ~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~-~~~~~~~~~~~~~~~ 298 (326)
|+++||||||++++||++.++++|+|||||||||+..+|+||+|.|++ +++++|+++++.+..
T Consensus 244 ~l~~iiR~He~~~~G~~~~~~~~~~TvfSa~~Y~~~~~N~ga~~~i~~~~~~~~~~~~~~~~~~ 307 (316)
T cd07417 244 NLEYIIRSHEVKDEGYEVEHDGKCITVFSAPNYCDQMGNKGAFIRITGSDLKPKFTQFEAVPHP 307 (316)
T ss_pred CCcEEEECCcccceeEEEecCCeEEEEeCCccccCCCCcceEEEEEeCCCceeeeEeccCCCCC
Confidence 999999999999999999999999999999999999999999999999 899999999876444
No 11
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=3.8e-72 Score=531.37 Aligned_cols=284 Identities=44% Similarity=0.835 Sum_probs=265.1
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceee
Q 020420 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLF 85 (326)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vf 85 (326)
++-+++.+.+.. .|+++++.+||++|+++|++||++++++.|++||||||||+.+|.++|+..+.++.++|||
T Consensus 3 ~~~~~~~~~~~~-------~l~~~~i~~l~~~~~~il~~e~~l~~i~~~i~ViGDIHG~~~dL~~l~~~~g~~~~~~ylF 75 (305)
T cd07416 3 IDVLKAHFMREG-------RLSEEDALRIITEGAEILRQEPNLLRIEAPVTVCGDIHGQFYDLLKLFEVGGSPANTRYLF 75 (305)
T ss_pred HHHHHHHHHcCC-------CCCHHHHHHHHHHHHHHHHhCCCeEccCCCEEEEEeCCCCHHHHHHHHHhcCCCCCceEEE
Confidence 556677776433 5889999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcE
Q 020420 86 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKI 165 (326)
Q Consensus 86 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~i 165 (326)
||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..++..+|+..+|..+.++|++||++|++++++
T Consensus 76 LGDyVDRG~~s~Evi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~~~l~~~~~~~f~~LPlaaii~~~i 155 (305)
T cd07416 76 LGDYVDRGYFSIECVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMEAFDCLPLAALMNQQF 155 (305)
T ss_pred ECCccCCCCChHHHHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhccHHHHHHHHHHHhhccceeEEcCCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCC------CcccC-CCCceeecChHHHHHHHHhCCCc
Q 020420 166 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIK------GWEAN-DRGVSYVFGADRVTEFLQKHDLE 238 (326)
Q Consensus 166 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~------~~~~n-~rg~g~~fg~~~~~~fl~~~~l~ 238 (326)
+|||||++|.+.++++|++++||.+.+..++++|+|||||..... +|.+| +||.|+.||++++++||++||++
T Consensus 156 ~~vHGGi~p~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~ 235 (305)
T cd07416 156 LCVHGGLSPELKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLL 235 (305)
T ss_pred EEEcCCCCcccccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCe
Confidence 999999999999999999999999988899999999999975432 47665 89999999999999999999999
Q ss_pred eEEEeeeeeccceEEecCC------eEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCC
Q 020420 239 LICRAHQVVEDGYEFFANR------RLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADK 297 (326)
Q Consensus 239 ~iIRgH~~~~~G~~~~~~~------~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~ 297 (326)
+||||||++++||++++++ +||||||||||||..+|+||+|.|+++. ..|+++.+.+.
T Consensus 236 ~iiR~He~~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~~~~~N~~a~l~i~~~~-~~~~~~~~~~~ 299 (305)
T cd07416 236 SIIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNV-MNIRQFNCSPH 299 (305)
T ss_pred EEEEeccccccceEEecCCCcCCCCcEEEEeCCccccCCCCceEEEEEEcCCc-ceEEEecCCCC
Confidence 9999999999999998876 8999999999999999999999999986 68888887654
No 12
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-73 Score=497.49 Aligned_cols=289 Identities=44% Similarity=0.906 Sum_probs=274.8
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCC
Q 020420 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRS 81 (326)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~ 81 (326)
.+-.+++-|+..-..+ .|+++++..||+-++++|..|.++..++.|+.|+|||||++.||.++|+..|--|++
T Consensus 2 ~~~d~d~wi~~vk~ck-------yLpE~elk~LCe~v~d~L~eEsNvqPV~tPVTvCGDIHGQFyDL~eLFrtgG~vP~t 74 (306)
T KOG0373|consen 2 RKMDLDQWIETVKKCK-------YLPENELKRLCEMVKDILMEESNVQPVSTPVTVCGDIHGQFYDLLELFRTGGQVPDT 74 (306)
T ss_pred CcCCHHHHHHHHHHcC-------CCCHHHHHHHHHHHHHHHhhhcCccccCCCeeEeeccchhHHHHHHHHHhcCCCCCc
Confidence 3445667777775554 789999999999999999999999999999999999999999999999999998999
Q ss_pred ceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhc-hhHHHHHHHHhccCCcEEE
Q 020420 82 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAAL 160 (326)
Q Consensus 82 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~ 160 (326)
.|||+|||||||-+|+|+..+|+.||.+||.++.+||||||++.+...|||++||..+|+ ...|+...++|+.|+++|+
T Consensus 75 nYiFmGDfVDRGyySLEtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGnan~wkycckVFD~LtlaAi 154 (306)
T KOG0373|consen 75 NYIFMGDFVDRGYYSLETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNANVWKYCCKVFDFLTLAAI 154 (306)
T ss_pred ceEEeccccccccccHHHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCchHHHHHHHHHhhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999996 5799999999999999999
Q ss_pred EcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceE
Q 020420 161 IDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELI 240 (326)
Q Consensus 161 i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~i 240 (326)
|+++++|||||+||++.+++||+-|.|..++|..+.++|++||||+. ++.|.-++||+|++||.+++++|..-|++++|
T Consensus 155 ID~~vLCVHGGLSPdirtlDqir~i~R~qEiPh~G~fcDlmWSDPed-ve~W~vSpRGAGwlFGskVt~eF~~iN~L~Li 233 (306)
T KOG0373|consen 155 IDEKVLCVHGGLSPDIRTLDQIRLIERNQEIPHEGPFCDLMWSDPED-VETWAVSPRGAGWLFGSKVTTEFNHINNLNLI 233 (306)
T ss_pred hcCcEEEEcCCCCccceeHHHHHhHHhhccCCCCCCccceeccChhh-hhhheeCCCCcceeechhhhHHHHhccchHHH
Confidence 99999999999999999999999999999999999999999999985 78999999999999999999999999999999
Q ss_pred EEeeeeeccceEEecCCe-EEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCC
Q 020420 241 CRAHQVVEDGYEFFANRR-LITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKK 298 (326)
Q Consensus 241 IRgH~~~~~G~~~~~~~~-~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~ 298 (326)
+|+||.+.+||++.+++| ++|||||||||...+|.|+||.++++++.++++|...+..
T Consensus 234 cRaHQLV~EG~KymF~eK~lvTVWSAPNYCYRCGNvAsi~~~d~~~~r~~k~F~avpd~ 292 (306)
T KOG0373|consen 234 CRAHQLVQEGFKYMFDEKGLVTVWSAPNYCYRCGNVASIMSFDDNLERETKIFSAVPDN 292 (306)
T ss_pred HhHHHHHHhhHHhccCCCCEEEEecCCchhhhccCeeeEEEecccCCccceeeeecCCc
Confidence 999999999999999988 9999999999999999999999999999999999876544
No 13
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=3.1e-71 Score=526.90 Aligned_cols=286 Identities=47% Similarity=0.880 Sum_probs=264.9
Q ss_pred HHHHHHhcc-CCC--CccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCC-----
Q 020420 9 VIRRLLEVR-GKP--GKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPR----- 80 (326)
Q Consensus 9 ~i~~l~~~~-~~~--~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~----- 80 (326)
+|.+++.+. +.+ ..+..|+++++.+||++|+++|++||++++++++++||||||||+.+|.++|+..++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~ 80 (311)
T cd07419 1 IITHLLKPRIWKPPTDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRAPIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGD 80 (311)
T ss_pred ChHHhcCcccccCccccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCCCEEEEEeccCCHHHHHHHHHHcCCCcccccCC
Confidence 477888887 333 457889999999999999999999999999999999999999999999999999998754
Q ss_pred ---CceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhch------hHHHHHHHH
Q 020420 81 ---SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV------RLWKIFTDC 151 (326)
Q Consensus 81 ---~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~------~~~~~~~~~ 151 (326)
.++||||||||||++|+||+.+|+++++.+|.++++||||||.+.++..+||..++..+++. .+|..+.++
T Consensus 81 ~~~~~~vfLGDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~ 160 (311)
T cd07419 81 IEYIDYLFLGDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRL 160 (311)
T ss_pred CcCceEEEECCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999999988864 689999999
Q ss_pred hccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCC-CCCCchhHHHHhhcCCCCC--CCCcccCC---CCce--eec
Q 020420 152 FNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPT-DVPESGLLCDLLWSDPSND--IKGWEAND---RGVS--YVF 223 (326)
Q Consensus 152 f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~-~~~~~~~~~dlLWsDP~~~--~~~~~~n~---rg~g--~~f 223 (326)
|+.||++++++++++|||||++|.+.++++|+.+.||. ..+..+++.|+|||||... ..++.+++ ||.| +.|
T Consensus 161 f~~LPl~avi~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~f 240 (311)
T cd07419 161 FEWLPLAAIIEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKF 240 (311)
T ss_pred HHhCchhheecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeE
Confidence 99999999999999999999999999999999999997 4456788999999999864 35677776 9988 799
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEecc
Q 020420 224 GADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKP 294 (326)
Q Consensus 224 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~ 294 (326)
|++++++||++||+++||||||++++||++.++++|+|||||||||+..+|+||++.|++++++++.+++|
T Consensus 241 g~~~~~~Fl~~n~l~~iiRgHe~~~~G~~~~~~~~~iTvfSa~~y~~~~~n~~ai~~i~~~~~~~~~~~~~ 311 (311)
T cd07419 241 GPDRVHRFLEENDLQMIIRAHECVMDGFERFAQGKLITLFSATNYCGTAGNAGAILVLGRDLTIIPKLIHP 311 (311)
T ss_pred CHHHHHHHHHHCCCeEEEEechhhhCCeEEeCCCeEEEEecCCcccCCCCceEEEEEECCCCcEeEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987
No 14
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.7e-68 Score=514.90 Aligned_cols=298 Identities=34% Similarity=0.622 Sum_probs=259.4
Q ss_pred ChhHHHHHHHHHHhccC---CCCccccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEeCCCCCHHHHHHHHHh
Q 020420 2 DPAVLDGVIRRLLEVRG---KPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIE----APIKICGDIHGQYSDLLRLFEY 74 (326)
Q Consensus 2 ~~~~~~~~i~~l~~~~~---~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~----~~i~ViGDIHG~~~~L~~ll~~ 74 (326)
+.+.++++|.++..... .......++.+++.+||++|+++|++||++++++ .+++|||||||++.+|.++|+.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~~~~~~i~VvGDIHG~~~dL~~ll~~ 87 (377)
T cd07418 8 TNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDVEDVCEVVVVGDVHGQLHDVLFLLED 87 (377)
T ss_pred CHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCEEEEEecCCCHHHHHHHHHH
Confidence 56778889998866531 1222355889999999999999999999999998 7999999999999999999999
Q ss_pred CCCCCC-CceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhch---hHHHHHHH
Q 020420 75 GGLPPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV---RLWKIFTD 150 (326)
Q Consensus 75 ~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~ 150 (326)
.|+++. +.|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||.+++..+|+. .+|+.+.+
T Consensus 88 ~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~~l~~~~~~ 167 (377)
T cd07418 88 AGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGKHVYRKCLG 167 (377)
T ss_pred hCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHHHHHHHHHH
Confidence 999875 45999999999999999999999999999999999999999999999999999999999964 69999999
Q ss_pred HhccCCcEEEEcCcEEEecCCC---------------------------CCCCCChhhhccCCCCC-CCCCch---hHHH
Q 020420 151 CFNCLPVAALIDEKILCMHGGL---------------------------SPDLHNLNQIRSLPRPT-DVPESG---LLCD 199 (326)
Q Consensus 151 ~f~~LPlaa~i~~~il~vHgGi---------------------------~p~~~~l~~i~~i~rp~-~~~~~~---~~~d 199 (326)
+|++||++++++++++|||||| +|.+.++++|++++||. +.+..+ +++|
T Consensus 168 ~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~~~~~i~~d 247 (377)
T cd07418 168 CFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGEGSNLIPGD 247 (377)
T ss_pred HHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCCCcccccee
Confidence 9999999999999999999999 34567899999999974 555443 5789
Q ss_pred HhhcCCCCCCCCcccC-CCCceeecChHHHHHHHHhCCCceEEEeeee------------eccceEEecC---CeEEEEe
Q 020420 200 LLWSDPSNDIKGWEAN-DRGVSYVFGADRVTEFLQKHDLELICRAHQV------------VEDGYEFFAN---RRLITIF 263 (326)
Q Consensus 200 lLWsDP~~~~~~~~~n-~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~------------~~~G~~~~~~---~~~iTif 263 (326)
+|||||... .+|.+| +||.|+.||++++++||++|++++||||||+ +++||++.++ ++|+|||
T Consensus 248 lLWSDP~~~-~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~~~liTvF 326 (377)
T cd07418 248 VLWSDPSLT-PGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVESGKLITLF 326 (377)
T ss_pred eEeeCCccC-CCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCCCcEEEEe
Confidence 999999864 566666 7999999999999999999999999999996 6799999887 8999999
Q ss_pred cCCCCC------CCCCCeEEEEEEcCCc--ceEEEEe---ccCCCCCC
Q 020420 264 SAPNYC------GEFDNAGAMMSVDETL--MCSFQIL---KPADKKPK 300 (326)
Q Consensus 264 Sa~~Y~------~~~~n~ga~l~i~~~~--~~~~~~~---~~~~~~~~ 300 (326)
|||||| +..+|+||++.++.+- ..+|.++ +|.++-.|
T Consensus 327 Sa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (377)
T cd07418 327 SAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANP 374 (377)
T ss_pred cCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCc
Confidence 999999 5789999999996543 3455544 55555554
No 15
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=2.6e-65 Score=476.35 Aligned_cols=270 Identities=43% Similarity=0.870 Sum_probs=254.3
Q ss_pred cCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHH
Q 020420 25 QLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLL 104 (326)
Q Consensus 25 ~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~ 104 (326)
.++++..+.|+.++..+|++|+++++++.||.|+|||||||.||.++|+..|-|.+++|+|||||||||-+|+||+.+|.
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~APiTVCGDIHGQf~DLmKLFEVGG~PA~t~YLFLGDYVDRGyFSiECvlYLw 139 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEAPITVCGDIHGQFFDLMKLFEVGGSPANTRYLFLGDYVDRGYFSIECVLYLW 139 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccCCeeEecccchHHHHHHHHHHccCCcccceeEeeccccccceeeeehHHHHH
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhcc
Q 020420 105 AYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRS 184 (326)
Q Consensus 105 ~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~ 184 (326)
+||+.||..+++||||||++.+...+.|..||..+|+.++|++..+.|+.||+||+.+++++|||||+||++.+++||++
T Consensus 140 sLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYse~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPEi~tl~DIr~ 219 (517)
T KOG0375|consen 140 SLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDACMESFDCLPLAALMNQQFLCVHGGLSPEIHTLDDIRK 219 (517)
T ss_pred HHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhccHHHHHHHHHHhccchHHHHhcCceEEecCCCCcccccHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHhhcCCCCCC------CCcccC-CCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCC
Q 020420 185 LPRPTDVPESGLLCDLLWSDPSNDI------KGWEAN-DRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANR 257 (326)
Q Consensus 185 i~rp~~~~~~~~~~dlLWsDP~~~~------~~~~~n-~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~ 257 (326)
+.|..+.|..+..||+|||||.++. +.|..| -||++|.|...|+.+||+.||+--|||+||.++.||+.+.+.
T Consensus 220 l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQDaGYRMYrks 299 (517)
T KOG0375|consen 220 LDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQDAGYRMYRKS 299 (517)
T ss_pred hhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhhhhhhhhhhcc
Confidence 9999999999999999999997642 345555 699999999999999999999999999999999999877655
Q ss_pred e------EEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccC
Q 020420 258 R------LITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 295 (326)
Q Consensus 258 ~------~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~ 295 (326)
+ +|||||||||.+.++|+||||+.+++.+ .+.+|.-+
T Consensus 300 qttGFPSLiTiFSAPNYLDvYnNKAAvLKYEnNVM-NIRQFncS 342 (517)
T KOG0375|consen 300 QTTGFPSLITIFSAPNYLDVYNNKAAVLKYENNVM-NIRQFNCS 342 (517)
T ss_pred cccCCchheeeecCCchhhhhccHHHHhhhhcccc-eeeccCCC
Confidence 4 8999999999999999999999988874 56666543
No 16
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=3e-64 Score=452.32 Aligned_cols=295 Identities=46% Similarity=0.906 Sum_probs=274.5
Q ss_pred HHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeeecCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceee
Q 020420 6 LDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEIEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLF 85 (326)
Q Consensus 6 ~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vf 85 (326)
++.-|++|...+ .+++.++..+|+.|+++|.+|.++..+..|++|+||+||||++|.++++..|..++..|+|
T Consensus 20 vd~~ie~L~~ck-------~lse~~v~~lc~~a~~~L~~e~nV~~v~~pvtvcGDvHGqf~dl~ELfkiGG~~pdtnylf 92 (319)
T KOG0371|consen 20 VDPWIEQLYKCK-------PLSEVDVSSLCLLAKEILDKEENVQPVNCPVTVCGDVHGQFHDLIELFKIGGLAPDTNYLF 92 (319)
T ss_pred cccchHHHHhcC-------CCccccchhHHHHHHHHHhccccccccccceEEecCcchhHHHHHHHHHccCCCCCcceee
Confidence 344566666554 7888999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhc-hhHHHHHHHHhccCCcEEEEcCc
Q 020420 86 LGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFN-VRLWKIFTDCFNCLPVAALIDEK 164 (326)
Q Consensus 86 LGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~ 164 (326)
+|||||||++|+|++.+|.++|++||++|.+||||||.+.+...|||++||.++|+ ..+|..|.+.|+++|++|.|+++
T Consensus 93 mGDyvdrGy~SvetVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~anvw~~Ftdlfdy~P~tali~~~ 172 (319)
T KOG0371|consen 93 MGDYVDRGYYSVETVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESK 172 (319)
T ss_pred eeeecccccchHHHHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccccchHHhhhhhhccchHhhhccc
Confidence 99999999999999999999999999999999999999999999999999999995 57999999999999999999999
Q ss_pred EEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEee
Q 020420 165 ILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAH 244 (326)
Q Consensus 165 il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH 244 (326)
++|+|||++|.+.+++.++.+.|-.++|.++-++|+|||||.. .-+|+.++||+|+.||.+..++|-.+||+++|-|+|
T Consensus 173 ifc~HGgLspsi~tld~~r~~dr~~evphegpmcDlLwsdpdd-r~gwg~sprgag~tfg~di~~~fn~~n~lslisRah 251 (319)
T KOG0371|consen 173 IFCLHGGLSPSIDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDD-RCGWGISPRGAGYTFGQDISEQFNHKNGLSLISRAH 251 (319)
T ss_pred eeeccCCcCcccchHHHHHHHHHhhcccCCCChhheeccCccc-CCCCCCCCCCCCcccchhhHHHhhccCCchHhHHHH
Confidence 9999999999999999999999988999999999999999984 578999999999999999999999999999999999
Q ss_pred eeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEeccCCCCCCCccCccccCCCC
Q 020420 245 QVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKPKFSFGSTTTVKSG 312 (326)
Q Consensus 245 ~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (326)
|-+.+||.+.+...++|||||||||...+|.+|++.++++....|.+++|++ ...+...++|.|
T Consensus 252 qlvm~g~nW~~~~~~vtiFSapnycYrcgn~a~i~e~d~~~~~~f~q~~psp----~k~e~~vtr~tp 315 (319)
T KOG0371|consen 252 QLVMEGYNWYHLWNVVTIFSAPNYCYRCGNQAAIMERDDTKNYDFLQFDPSP----RKVEPDVTRKTP 315 (319)
T ss_pred HHHhcccceeeecceeEEccCCchhhccccHHHHhhhhhccCcceEEecCCc----cccccccccCCC
Confidence 9999999999999999999999999999999999999999999999999944 344445555443
No 17
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=9e-58 Score=434.50 Aligned_cols=269 Identities=35% Similarity=0.652 Sum_probs=244.4
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeec----CcEEEEeCCCCCHHHHHHHHHhCCCCCCC-ceeeecCccCCCCCcHH
Q 020420 24 VQLSESEIRQLCVVSKGIFLRQPNLLEIE----APIKICGDIHGQYSDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQSLE 98 (326)
Q Consensus 24 ~~l~~~~~~~l~~~a~~il~~ep~ll~l~----~~i~ViGDIHG~~~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s~e 98 (326)
..|++..++.|+.+|+++|++.|++-+++ ..+.|+||+||.++||.-+|-+.|+|+.+ .|||.||+||||.+|+|
T Consensus 132 q~LH~kYVl~iL~EakK~lkqmPnis~isTs~S~qVTiCGDLHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siE 211 (631)
T KOG0377|consen 132 QRLHPKYVLLILREAKKSLKQMPNISRISTSVSQQVTICGDLHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIE 211 (631)
T ss_pred hhccHHHHHHHHHHHHHHHHhCCCCCccccccccceEEeccccccccceEEEEecCCCCCCCCCeeecCchhhccccchh
Confidence 37899999999999999999999998885 46999999999999999999999999865 59999999999999999
Q ss_pred HHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHh---chhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCC
Q 020420 99 TICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF---NVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPD 175 (326)
Q Consensus 99 vl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~---~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~ 175 (326)
||..|+++-+.||..+++-|||||+..+|..|||..|+..+| +.++.+.+.++|++||++.++++++++||||+| +
T Consensus 212 vLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~KYk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiS-d 290 (631)
T KOG0377|consen 212 VLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESKYKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGIS-D 290 (631)
T ss_pred hHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHHhhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcc-c
Confidence 999999999999999999999999999999999999999998 578999999999999999999999999999998 4
Q ss_pred CCChhhhccCCC--------CCC--------------CCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHH
Q 020420 176 LHNLNQIRSLPR--------PTD--------------VPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQ 233 (326)
Q Consensus 176 ~~~l~~i~~i~r--------p~~--------------~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~ 233 (326)
.++++-+.+|+| |.. ..++..+.|+|||||.....+|.+.-||.|++||+|++..||+
T Consensus 291 ~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lq 370 (631)
T KOG0377|consen 291 STDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQQIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQ 370 (631)
T ss_pred chhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHHHHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHH
Confidence 456666666654 211 0134688999999999876777777899999999999999999
Q ss_pred hCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCcceEEEEec
Q 020420 234 KHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETLMCSFQILK 293 (326)
Q Consensus 234 ~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~~~~~~~~~ 293 (326)
+++++++||+|||.++||++.++++|+|||||+||....+|+||++++...++..|.+..
T Consensus 371 k~~l~~liRSHECKpeGyEf~Hd~kvlTiFSASNYYe~GSNrGAYikl~~~~~PhfvQY~ 430 (631)
T KOG0377|consen 371 KHRLSYLIRSHECKPEGYEFCHDNKVLTIFSASNYYEIGSNRGAYIKLGNQLTPHFVQYQ 430 (631)
T ss_pred HhCceeeeeecccCCCcceeeeCCeEEEEEeccchheecCCCceEEEeCCCCCchHHHHH
Confidence 999999999999999999999999999999999999999999999999999987776654
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=5.1e-50 Score=388.50 Aligned_cols=275 Identities=43% Similarity=0.817 Sum_probs=256.5
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEeCCCCCHHHHHHHHHhCCCCCC-CceeeecCccCCCCCcHH
Q 020420 24 VQLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKICGDIHGQYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLE 98 (326)
Q Consensus 24 ~~l~~~~~~~l~~~a~~il~~ep~ll~l~~----~i~ViGDIHG~~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG~~s~e 98 (326)
..++..-+-.|+..++.+++++|++++++. .+.|+||+||++.++.+++...|.|+. ..++|.||+||||..|.|
T Consensus 181 ~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylfngdfv~rgs~s~e 260 (476)
T KOG0376|consen 181 KKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSWSVE 260 (476)
T ss_pred cccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccccCceeeeccccee
Confidence 356667778999999999999999999864 589999999999999999999999876 469999999999999999
Q ss_pred HHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCC-CCC
Q 020420 99 TICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSP-DLH 177 (326)
Q Consensus 99 vl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p-~~~ 177 (326)
+...++..|+.+|+++|++|||||+..++..|||.+++..+|..+.+..+.++|..||++..|+++++.+|||+.. .-.
T Consensus 261 ~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v 340 (476)
T KOG0376|consen 261 VILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKVLVMHGGLFSPDGV 340 (476)
T ss_pred eeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCceEEEecCcCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999964 446
Q ss_pred ChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCC
Q 020420 178 NLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANR 257 (326)
Q Consensus 178 ~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~ 257 (326)
+++++++|.|+...++.+..+++|||||... .|..++.||.|..||++++++||+.|+++.|||||++.+.||++.++|
T Consensus 341 ~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~-~g~s~S~r~~g~~fG~d~t~~f~~~n~l~~i~rshe~~d~gy~~eh~g 419 (476)
T KOG0376|consen 341 TLEDFRNIDRFEQPPEEGLMCELLWSDPQPA-NGRSPSKRGVGLQFGPDVTERFLQDNNLDKIIRSHEVKDEGYEVEHSG 419 (476)
T ss_pred cHHHHHhhhhccCCcccccccccccCCCccc-cCCCccccCceeeeCCCchhhHHhhcchHHHhhccccCCCceeeecCC
Confidence 8999999999988888999999999999864 899999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCCCCCCCCCCeEEEEEEc-CCcceEEEEeccCCCCC
Q 020420 258 RLITIFSAPNYCGEFDNAGAMMSVD-ETLMCSFQILKPADKKP 299 (326)
Q Consensus 258 ~~iTifSa~~Y~~~~~n~ga~l~i~-~~~~~~~~~~~~~~~~~ 299 (326)
+|+|||||||||+.++|.||++.++ .+++..+..|++++..+
T Consensus 420 ~l~tvfsapnycd~~~n~ga~i~~~~~~~~p~~~~~e~vp~~~ 462 (476)
T KOG0376|consen 420 KLITVFSAPNYCDQMGNKGAFIHLEPDDLTPNFYTFEAVPHPD 462 (476)
T ss_pred cEEEEecCcchhhhcCCcceEEEecCCCCccceeecccCCCCC
Confidence 9999999999999999999999998 77888899998766553
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=100.00 E-value=1.3e-36 Score=275.10 Aligned_cols=214 Identities=52% Similarity=0.839 Sum_probs=176.7
Q ss_pred EEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHH
Q 020420 56 KICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDE 135 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e 135 (326)
+|||||||++++|.++++..+..+.+.+||||||||||+.+.+++.+++.++.. |.++++|+||||.+.+....++..+
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~~ 79 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDKLIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYDE 79 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCEEEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcch
Confidence 589999999999999999999888899999999999999999999999998876 8899999999999887766555433
Q ss_pred H---------HHHhchhHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCC
Q 020420 136 C---------KRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDP 205 (326)
Q Consensus 136 ~---------~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP 205 (326)
. .......++..+.+++..||+++.++. +++|||||++|.....++.. ..+......+++|++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~------~~~~~~~~~~~lw~r~ 153 (225)
T cd00144 80 DEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIK------EEPEDQLPEDLLWSDP 153 (225)
T ss_pred hhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhh------cCcccccceeeeecCC
Confidence 2 222345678888999999999999987 99999999999876555443 2233455688999999
Q ss_pred CCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEE
Q 020420 206 SNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMS 280 (326)
Q Consensus 206 ~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~ 280 (326)
.........+.++. |+++++.|++.++.+.|||||+++..|+.....++++||+|++.|++..+|..+++.
T Consensus 154 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ii~GHt~~~~~~~~~~~~~~i~IDtg~~~~~~~~~~l~~~~ 224 (225)
T cd00144 154 LELPGGFGSSRRGG----GPDAVEWFLKKNGLKLIVRGHTPVEEGYEFGHDGNLITIDSGCNYCGGGGNKLAALV 224 (225)
T ss_pred CCCCCCCcCCCCCC----CHHHHHHHHHHCCCeEEEEcCccccCccEEcCCCCEEEEecCCcccCCCCccEEEEe
Confidence 85433333344444 999999999999999999999999999876678899999999999877677776653
No 20
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.94 E-value=3.7e-26 Score=206.19 Aligned_cols=176 Identities=22% Similarity=0.348 Sum_probs=129.9
Q ss_pred EEEeCCCCCHHHHHHHHHhCCC--------CCCCceeeecCccCCCCCcHHHHHHHHHHHhh---CCCcEEEeCCccccc
Q 020420 56 KICGDIHGQYSDLLRLFEYGGL--------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIK---YPENFFLLRGNHECA 124 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll~~~g~--------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~---~p~~v~lLrGNHE~~ 124 (326)
+||||||||+++|.++|+.+++ .+.+.+||+||+||||+++.+++.+|+.++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 5899999999999999999875 34678999999999999999999999998754 467899999999999
Q ss_pred ccccccCCh--HHHHHHhc-----hhH---HHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCc
Q 020420 125 SVNRVYGFY--DECKRRFN-----VRL---WKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPES 194 (326)
Q Consensus 125 ~~~~~~gf~--~e~~~~~~-----~~~---~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~ 194 (326)
.++..+.+. ........ ..+ -..+.+|++.+|+...++ ++++||||++|
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~-~~~fvHag~~~-------------------- 139 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVN-DTLFVHGGLGP-------------------- 139 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEEC-CEEEEeCCcHH--------------------
Confidence 887543322 11111000 111 234578999999998776 79999999932
Q ss_pred hhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCC
Q 020420 195 GLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAP 266 (326)
Q Consensus 195 ~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~ 266 (326)
+|++.-.... .+.+ =++..++++++.++.+.||+||++++.|....+++++|+|.++.
T Consensus 140 ------~w~r~y~~~~---~~~~-----~~~~~~~~~l~~~~~~~iv~GHTh~~~~~~~~~~g~~i~ID~g~ 197 (208)
T cd07425 140 ------LWYRGYSKET---SDKE-----CAAAHLDKVLERLGAKRMVVGHTPQEGGIVTFCGGKVIRIDVGM 197 (208)
T ss_pred ------HHhhHhhhhh---hhcc-----chHHHHHHHHHHcCCCeEEEcCeeeecCceEEECCEEEEEeCCc
Confidence 3322110000 0000 01256888999999999999999999887668899999998843
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.94 E-value=6.2e-26 Score=209.49 Aligned_cols=121 Identities=24% Similarity=0.410 Sum_probs=96.7
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC---------CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP---------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHEC 123 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~---------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~ 123 (326)
++++||||||||++.|.++|+.+++. ..+++|||||||||||+|.||+.+++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57899999999999999999998873 45789999999999999999999998874 56689999999998
Q ss_pred ccccccc--------CChHHHHHHh-------chhHHHHHHHHhccCCcEEEEc-CcEEEecCCCCCCC
Q 020420 124 ASVNRVY--------GFYDECKRRF-------NVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDL 176 (326)
Q Consensus 124 ~~~~~~~--------gf~~e~~~~~-------~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p~~ 176 (326)
+.++... |.. +....| ...+.+.+.+||++||++..++ ++++|||||+.|..
T Consensus 79 ~~l~~~~~~~~~~~~gg~-~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~ 146 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLE-TTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDY 146 (245)
T ss_pred HHHHHHhCCCccccchhH-hHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHh
Confidence 7665322 111 112222 1246678899999999997764 57999999998763
No 22
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.92 E-value=4.4e-24 Score=200.04 Aligned_cols=218 Identities=17% Similarity=0.292 Sum_probs=142.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
|+++||||||||+++|.++|+.+++. ..+.++|+||+|||||+|.||+.++..+ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 57899999999999999999999874 5678999999999999999999999876 357999999999987765555
Q ss_pred Ch-----HHHHHHhchhHHHHHHHHhccCCcEEEE-cCcEEEecCCCCCCCCChhhhc----cCCCCCCCCC-chhHHHH
Q 020420 132 FY-----DECKRRFNVRLWKIFTDCFNCLPVAALI-DEKILCMHGGLSPDLHNLNQIR----SLPRPTDVPE-SGLLCDL 200 (326)
Q Consensus 132 f~-----~e~~~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~p~~~~l~~i~----~i~rp~~~~~-~~~~~dl 200 (326)
.. +...........+.+.+|++.+|+...+ ++++++||||++|.+. +++.. +++..+.-++ ...+..+
T Consensus 77 ~~~~~~~~~l~~~l~~~~~~~~~~~L~~lPl~~~~~~~~~l~vHAGi~p~~~-~~~~~~~a~eve~~l~~~~~~~~~~~m 155 (275)
T PRK00166 77 IKRNKKKDTLDPILEAPDRDELLDWLRHQPLLHVDEELGLVMVHAGIPPQWD-LATALALAREVEAVLRSDDYRDFLANM 155 (275)
T ss_pred CccccchhHHHHHHccccHHHHHHHHHCCCcEEEECCCCEEEEccCCCCCCC-HHHHHHHHHHHHHHhcCCcHHHHHHHh
Confidence 32 1222222334456788999999998765 5689999999999863 22211 1111111222 2355555
Q ss_pred hhcCCCCCCCCcccCCCCc-eeecChHHHH--HHHHhCC-----------------------------CceEEEeeeeec
Q 020420 201 LWSDPSNDIKGWEANDRGV-SYVFGADRVT--EFLQKHD-----------------------------LELICRAHQVVE 248 (326)
Q Consensus 201 LWsDP~~~~~~~~~n~rg~-g~~fg~~~~~--~fl~~~~-----------------------------l~~iIRgH~~~~ 248 (326)
.|+.|.. |.++-.|. ...|--.++. +||...| -..||-||.+..
T Consensus 156 y~~~p~~----W~~~l~~~~r~r~~~n~~trmR~~~~~g~l~~~~k~~~~~~~~~~~pWf~~~~~~~~~~~i~fGHwa~l 231 (275)
T PRK00166 156 YGNEPDR----WSPDLTGLERLRYIINAFTRMRFCTPDGRLDFKCKGPPDEAPAGLKPWFEVPGRKTRDYTIVFGHWAAL 231 (275)
T ss_pred cCCCcCc----cCcccCchHHHHHHHHHHhhhhcccCCCceeecccCCcccCCcCCCCCccCcCccCCCCeEEEecCccc
Confidence 5555532 33332222 1122222221 1233222 347999999987
Q ss_pred cceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCCc
Q 020420 249 DGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDETL 285 (326)
Q Consensus 249 ~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~~ 285 (326)
.|... ...++.+=|.--+. +.=..+.++..-
T Consensus 232 ~G~~~--~~~~~~LDtGcvwg----g~Lta~~l~~~~ 262 (275)
T PRK00166 232 EGLTT--PPNIIALDTGCVWG----GKLTALRLEDKQ 262 (275)
T ss_pred CCccC--CCCeEEeecccccC----CeEEEEEeCCCc
Confidence 78765 45678888876552 333456676544
No 23
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.91 E-value=7.7e-24 Score=192.88 Aligned_cols=115 Identities=23% Similarity=0.361 Sum_probs=90.7
Q ss_pred EEEeCCCCCHHHHHHHHHhCCCC--------CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccc
Q 020420 56 KICGDIHGQYSDLLRLFEYGGLP--------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVN 127 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll~~~g~~--------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~ 127 (326)
+||||||||++.|.++|+.+++. +.+.+|||||||||||+|.||+.+|+.+. .+.++++|+||||.+.+.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~--~~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMV--DAGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhh--cCCCEEEEEccCcHHHHH
Confidence 68999999999999999998775 46789999999999999999999999885 345899999999987664
Q ss_pred cccC------------Ch-----HHHHHHhc--hhHHHHHHHHhccCCcEEEEcCcEEEecCCCC
Q 020420 128 RVYG------------FY-----DECKRRFN--VRLWKIFTDCFNCLPVAALIDEKILCMHGGLS 173 (326)
Q Consensus 128 ~~~g------------f~-----~e~~~~~~--~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~ 173 (326)
...+ .. .+..+.+. .+..+.+.+||++||+.... ++++|||||+.
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~lP~~~~~-~~~~~VHAg~~ 143 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFREHSEEHKDWLEWFKTLPLFLDL-GGVRVVHACWD 143 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhccchhHHHHHHHHhcCCcEEEE-CCEEEEECCcC
Confidence 2111 00 11122221 34567889999999999765 58999999986
No 24
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.91 E-value=9.4e-24 Score=193.53 Aligned_cols=121 Identities=26% Similarity=0.493 Sum_probs=96.6
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCC----------CCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPP----------RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 122 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~----------~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE 122 (326)
+|+.||||||||+.+|.++|+.+++.+ .+++||||||||||++|.||+.+|++++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 589999999999999999999998753 35899999999999999999999998863 457999999999
Q ss_pred ccccccc--------cCChHHHHHHh---chhHHHHHHHHhccCCcEEEEc-CcEEEecCCCCCCC
Q 020420 123 CASVNRV--------YGFYDECKRRF---NVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDL 176 (326)
Q Consensus 123 ~~~~~~~--------~gf~~e~~~~~---~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p~~ 176 (326)
.+.++.. .|+.. ....+ ...+.+.+.+||+.||+...++ ++++|||||+++..
T Consensus 79 ~~l~~~~~~~~~~~~~~~~~-t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~ 143 (234)
T cd07423 79 NKLYRKLQGRNVKITHGLEE-TVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEM 143 (234)
T ss_pred HHHHHHhcCCCccccCcccc-hHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHh
Confidence 8766532 22222 12222 2456778899999999987765 47999999988643
No 25
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.91 E-value=5.8e-24 Score=197.38 Aligned_cols=119 Identities=27% Similarity=0.395 Sum_probs=97.9
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCCh
Q 020420 55 IKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (326)
Q Consensus 55 i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 133 (326)
++||||||||+++|+++|+.+++. +.+.++|+||||||||+|+||+.++++++ .++++|+||||.+.++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 489999999999999999999885 56889999999999999999999999875 5799999999998876555532
Q ss_pred -----HHHHHHhchhHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCCCC
Q 020420 134 -----DECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLH 177 (326)
Q Consensus 134 -----~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~ 177 (326)
+.....+.....+.+.+|++++|+...+++ ++++||||++|.+.
T Consensus 77 ~~~~~~t~~~~l~~~~~~~~~~wLr~lPl~~~~~~~~~l~vHAGi~p~w~ 126 (257)
T cd07422 77 KPKKKDTLDDILNAPDRDELLDWLRHQPLLHRDPELGILMVHAGIPPQWS 126 (257)
T ss_pred ccccHhHHHHHHhccchHHHHHHHHhCCCEEEECCccEEEEccCCCCCCC
Confidence 122222233445678899999999988765 79999999999873
No 26
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.90 E-value=1.4e-23 Score=195.82 Aligned_cols=121 Identities=22% Similarity=0.354 Sum_probs=100.5
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
|+++||||||||+++|.++|+++++. ..+.++|+||+|||||+|+||+.++.++. .++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 56899999999999999999999875 46789999999999999999999998764 56889999999988876666
Q ss_pred C-----hHHHHHHhchhHHHHHHHHhccCCcEEEEc-CcEEEecCCCCCCCC
Q 020420 132 F-----YDECKRRFNVRLWKIFTDCFNCLPVAALID-EKILCMHGGLSPDLH 177 (326)
Q Consensus 132 f-----~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~-~~il~vHgGi~p~~~ 177 (326)
+ .+.....+.....+.+.+|++++|+....+ .++++||||++|.+.
T Consensus 77 ~~~~~~~d~l~~~l~a~~~~ell~wLr~lPl~i~~~~~~~~lVHAGi~P~w~ 128 (279)
T TIGR00668 77 ISRNKPKDRLDPLLEAPDADELLNWLRRQPLLQHDEEKKLVMAHAGITPQWD 128 (279)
T ss_pred CCccCchHHHHHHHHccCHHHHHHHHHcCCcEEEeCCCCEEEEecCCCCCCc
Confidence 4 233333345566788899999999986654 369999999999873
No 27
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.88 E-value=1.1e-22 Score=184.69 Aligned_cols=115 Identities=25% Similarity=0.321 Sum_probs=88.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
++++||||||||+++|.++|+.+++. ..++++||||+|||||+|.||+.+|.. .+++.|+||||.+.++...+
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNHE~~~l~~~~~ 90 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNHEQMALDALAS 90 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCchHHHHHHHHHC
Confidence 48999999999999999999999886 567899999999999999999999854 25889999999887753211
Q ss_pred ChH--------HHHHHh---chhHHHHHHHHhccCCcEEEEc---CcEEEecCCCC
Q 020420 132 FYD--------ECKRRF---NVRLWKIFTDCFNCLPVAALID---EKILCMHGGLS 173 (326)
Q Consensus 132 f~~--------e~~~~~---~~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~ 173 (326)
-.. +....+ ..+.+..+.+|+++||+...+. +++++||||++
T Consensus 91 ~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p 146 (218)
T PRK11439 91 QQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYP 146 (218)
T ss_pred CccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCC
Confidence 100 000111 1234556678999999986553 46999999984
No 28
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.87 E-value=1.8e-21 Score=182.19 Aligned_cols=188 Identities=20% Similarity=0.256 Sum_probs=124.3
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCC------CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCC-cEEEeCCccccccc
Q 020420 54 PIKICGDIHGQYSDLLRLFEYGGLP------PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPE-NFFLLRGNHECASV 126 (326)
Q Consensus 54 ~i~ViGDIHG~~~~L~~ll~~~g~~------~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~-~v~lLrGNHE~~~~ 126 (326)
++++||||||+++.|.++|+.+... ..+.+|||||||||||+|.+|+.+|++++..+|. ++++|+||||.+.+
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 6899999999999999999865421 2456999999999999999999999999888876 68999999996543
Q ss_pred ccccC---------C------------------------------------------------------hHHHHHHhc--
Q 020420 127 NRVYG---------F------------------------------------------------------YDECKRRFN-- 141 (326)
Q Consensus 127 ~~~~g---------f------------------------------------------------------~~e~~~~~~-- 141 (326)
..... | -.+....|+
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 21100 0 011223332
Q ss_pred -------hhHHHHHHHHhccCCcEEEEcCcE-------------EEecCCCCCCCCChhhhccCC-CCCCCCCchhHHHH
Q 020420 142 -------VRLWKIFTDCFNCLPVAALIDEKI-------------LCMHGGLSPDLHNLNQIRSLP-RPTDVPESGLLCDL 200 (326)
Q Consensus 142 -------~~~~~~~~~~f~~LPlaa~i~~~i-------------l~vHgGi~p~~~~l~~i~~i~-rp~~~~~~~~~~dl 200 (326)
..+-+...+|++.||.....+ .+ +|||||+.|...--+|.+.+. +-...|. .++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~-~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~----~~~ 237 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEED-DVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPK----IAP 237 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeC-cccccccccccccceEEEEcccCCCCChHHhhhhhhcccccccc----ccc
Confidence 133456789999999986544 55 999999999987666766543 2222222 267
Q ss_pred hhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCC
Q 020420 201 LWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCG 270 (326)
Q Consensus 201 LWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~ 270 (326)
||....- -..++.. ...=.+||-||+. +....+.-|.|=+...|.+
T Consensus 238 l~~R~~f-----~~~~~~~--------------~~~~~~VVhGHt~-----~~~~~~~Ri~iDtGa~~~~ 283 (304)
T cd07421 238 LSGRKNV-----WNIPQEL--------------ADKKTIVVSGHHG-----KLHIDGLRLIIDEGGGFDD 283 (304)
T ss_pred cccchhh-----hcCcccc--------------cCCCeEEEECCCC-----CceecCCEEEEECCCCcCC
Confidence 7766541 0111110 0012577889982 2344444566777776654
No 29
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.87 E-value=4.5e-22 Score=179.04 Aligned_cols=182 Identities=22% Similarity=0.320 Sum_probs=119.2
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
++++|||||||++.+|.++++..++. ..+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 47999999999999999999998875 467788999999999999999988854 36899999999988765433
Q ss_pred --ChHHHHHHhc---------hhHHHHHHHHhccCCcEEEEc---CcEEEecCCCCCCCCChhhhccCCCCCCCCCchhH
Q 020420 132 --FYDECKRRFN---------VRLWKIFTDCFNCLPVAALID---EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLL 197 (326)
Q Consensus 132 --f~~e~~~~~~---------~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~ 197 (326)
...+.....+ .++++.+.+||+.||+...++ .++++||||+++... ...+.. +.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~-~~~~~~-----~~~~~~~~ 148 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDW-SDGVGA-----VTLRPEDI 148 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchh-hhhhhc-----cccCcccc
Confidence 2222222211 124566888999999998765 369999999865431 111000 01112234
Q ss_pred HHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCC
Q 020420 198 CDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNY 268 (326)
Q Consensus 198 ~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y 268 (326)
.+++|+++...... +...-+.+.||-||++.+..+.. ++ .+-|-..+-|
T Consensus 149 ~~~~w~~~~~~~~~-------------------~~~~~~~~~iV~GHTh~~~~~~~--~~-~i~ID~Gsv~ 197 (207)
T cd07424 149 EELLWSRTRIQKAQ-------------------TQPIKGVDAVVHGHTPVKRPLRL--GN-VLYIDTGAVF 197 (207)
T ss_pred eeeeeccchhhhcC-------------------ccccCCCCEEEECCCCCCcceEE--CC-EEEEECCCCC
Confidence 56788766421000 00011456789999988654432 33 3445555433
No 30
>PHA02239 putative protein phosphatase
Probab=99.86 E-value=2e-21 Score=178.47 Aligned_cols=174 Identities=21% Similarity=0.284 Sum_probs=118.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC--CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccccccccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP--PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVY 130 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~ 130 (326)
|++++||||||++..|.++++.+... +.+.+||+|||||||++|.+++..++.+. ..+.++++|+||||.+.+....
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~s~~v~~~l~~~~-~~~~~~~~l~GNHE~~~l~~~~ 79 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKRSKDVVNYIFDLM-SNDDNVVTLLGNHDDEFYNIME 79 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCChHHHHHHHHHHh-hcCCCeEEEECCcHHHHHHHHh
Confidence 57899999999999999999987533 45789999999999999999999998875 3566899999999987543210
Q ss_pred C-----C---------hHHHHHHhc-------------------------------hhHHHHHHHHhccCCcEEEEcCcE
Q 020420 131 G-----F---------YDECKRRFN-------------------------------VRLWKIFTDCFNCLPVAALIDEKI 165 (326)
Q Consensus 131 g-----f---------~~e~~~~~~-------------------------------~~~~~~~~~~f~~LPlaa~i~~~i 165 (326)
+ . ..+....|+ ...+..+..|+++||+.... +++
T Consensus 80 ~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~-~~~ 158 (235)
T PHA02239 80 NVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKE-DKY 158 (235)
T ss_pred CchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEE-CCE
Confidence 0 0 011112221 11334556799999999664 589
Q ss_pred EEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeee
Q 020420 166 LCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQ 245 (326)
Q Consensus 166 l~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~ 245 (326)
+|||||+.|... +++ ....+++|.+. . .+.. .=+.||-||+
T Consensus 159 ifVHAGi~p~~~-~~~-------------q~~~~llWiR~-f-----~~~~-------------------~g~~vV~GHT 199 (235)
T PHA02239 159 IFSHSGGVSWKP-VEE-------------QTIDQLIWSRD-F-----QPRK-------------------DGFTYVCGHT 199 (235)
T ss_pred EEEeCCCCCCCC-hhh-------------CCHhHeEEecc-c-----CCCC-------------------CCcEEEECCC
Confidence 999999988643 222 12368899775 1 1111 1236788999
Q ss_pred eeccceEEecCCeEEEEecCCCC
Q 020420 246 VVEDGYEFFANRRLITIFSAPNY 268 (326)
Q Consensus 246 ~~~~G~~~~~~~~~iTifSa~~Y 268 (326)
++.++..... ++.|.|-...-|
T Consensus 200 p~~~~~~~~~-~~~I~IDtGa~~ 221 (235)
T PHA02239 200 PTDSGEVEIN-GDMLMCDVGAVF 221 (235)
T ss_pred CCCCCccccc-CCEEEeecCccc
Confidence 8866543222 345666665433
No 31
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.82 E-value=2.7e-20 Score=169.13 Aligned_cols=115 Identities=25% Similarity=0.294 Sum_probs=85.4
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
++++||||||||+++|+++|+.+.+. ..+.++|+||||||||+|.||+.+|.. .+++.||||||.+.+....+
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GNHE~~~~~~~~~ 88 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGNHEAMALDAFET 88 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECchHHHHHHHHhc
Confidence 48999999999999999999998764 457889999999999999999998753 36899999999877653211
Q ss_pred Ch-H-------HHHHHhc---hhHHHHHHHHhccCCcEEEEc---CcEEEecCCCC
Q 020420 132 FY-D-------ECKRRFN---VRLWKIFTDCFNCLPVAALID---EKILCMHGGLS 173 (326)
Q Consensus 132 f~-~-------e~~~~~~---~~~~~~~~~~f~~LPlaa~i~---~~il~vHgGi~ 173 (326)
-. . +....+. .........|+++||+...+. .++++||||++
T Consensus 89 ~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p 144 (218)
T PRK09968 89 GDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYP 144 (218)
T ss_pred CChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCC
Confidence 00 0 0011111 123344566899999987653 36899999984
No 32
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.41 E-value=1.7e-12 Score=107.58 Aligned_cols=159 Identities=24% Similarity=0.275 Sum_probs=102.0
Q ss_pred CcEEEEeCCCCCHHHH----HHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHH--HHHHhhCCCcEEEeCCccccccc
Q 020420 53 APIKICGDIHGQYSDL----LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLL--LAYKIKYPENFFLLRGNHECASV 126 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L----~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll--~~lk~~~p~~v~lLrGNHE~~~~ 126 (326)
++|+++||+|+..... ..+.......+.+.+|++||++|++..+.+..... .......+..+++++||||....
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~~ 80 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYSG 80 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccccccchhhhccchhhhhcccccccccccccccee
Confidence 4799999999999987 33333333355677889999999999988876654 45556677889999999997764
Q ss_pred ccccCChHHHH----------------------------------HHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCC
Q 020420 127 NRVYGFYDECK----------------------------------RRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGL 172 (326)
Q Consensus 127 ~~~~gf~~e~~----------------------------------~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi 172 (326)
...+....... .............+.............++++|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~H~p~ 160 (200)
T PF00149_consen 81 NSFYGFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVIVFTHHPP 160 (200)
T ss_dssp HHHHHHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEEEEESSSS
T ss_pred ccccccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccccccccccccceeEEEecCC
Confidence 43211111110 00011112222233333334444556899999999
Q ss_pred CCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeee
Q 020420 173 SPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVV 247 (326)
Q Consensus 173 ~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~ 247 (326)
.+......+. .....+.+.+..++++.++++++.||+..
T Consensus 161 ~~~~~~~~~~------------------------------------~~~~~~~~~~~~~~~~~~v~~~~~GH~H~ 199 (200)
T PF00149_consen 161 YSSSSDSSSY------------------------------------GNESKGREALEELLKKYNVDLVLSGHTHR 199 (200)
T ss_dssp STTSSSTHHH------------------------------------SSEEEHHHHHHHHHHHTTCSEEEEESSSS
T ss_pred CCcccccccc------------------------------------chhhccHHHHHHHHhhCCCCEEEeCceec
Confidence 8653222111 12356678899999999999999999854
No 33
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.19 E-value=9.5e-10 Score=93.81 Aligned_cols=83 Identities=25% Similarity=0.347 Sum_probs=63.3
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCCh
Q 020420 54 PIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (326)
Q Consensus 54 ~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 133 (326)
++.++||+||+...+.++++.+.. .+.++++||++++++.+. + .....++.++||||....
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d~ii~~GD~~~~~~~~~--------~--~~~~~~~~V~GNhD~~~~------- 61 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VDLIIHAGDVLYPGPLNE--------L--ELKAPVIAVRGNCDGEVD------- 61 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CCEEEECCccccccccch--------h--hcCCcEEEEeCCCCCcCC-------
Confidence 578999999999999999998643 678899999999998655 1 223469999999997632
Q ss_pred HHHHHHhchhHHHHHHHHhccCCcEEEEc--C-cEEEecCCCC
Q 020420 134 DECKRRFNVRLWKIFTDCFNCLPVAALID--E-KILCMHGGLS 173 (326)
Q Consensus 134 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i~--~-~il~vHgGi~ 173 (326)
+..+|....+. + +++++||...
T Consensus 62 ------------------~~~~p~~~~~~~~g~~i~v~Hg~~~ 86 (155)
T cd00841 62 ------------------FPILPEEAVLEIGGKRIFLTHGHLY 86 (155)
T ss_pred ------------------cccCCceEEEEECCEEEEEECCccc
Confidence 34566554432 2 6999998764
No 34
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.17 E-value=3.4e-10 Score=95.73 Aligned_cols=137 Identities=22% Similarity=0.313 Sum_probs=85.2
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF 132 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf 132 (326)
|+++++||+|++..++.++++.+ ...+.++++||++|+ .+++..+... .++.++||||..........
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~~~~~~~~ 68 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWAFPNENDE 68 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTHHHSEECT
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH----HHHHHHHhcC------CEEEEeCCcccccchhhhhc
Confidence 68999999999999999999987 345678889999993 6666666443 59999999996543322111
Q ss_pred hHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCc
Q 020420 133 YDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGW 212 (326)
Q Consensus 133 ~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~ 212 (326)
. . +.+..... ....+++++||....
T Consensus 69 ~----------~------~~~~~~~~-~~~~~i~~~H~~~~~-------------------------------------- 93 (156)
T PF12850_consen 69 E----------Y------LLDALRLT-IDGFKILLSHGHPYD-------------------------------------- 93 (156)
T ss_dssp C----------S------SHSEEEEE-ETTEEEEEESSTSSS--------------------------------------
T ss_pred c----------c------cccceeee-ecCCeEEEECCCCcc--------------------------------------
Confidence 0 0 11111111 123479999997653
Q ss_pred ccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecC
Q 020420 213 EANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (326)
Q Consensus 213 ~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 265 (326)
...+.+.+.+.+...+.++++-||.-.+.-.+ ..+..+++.=|.
T Consensus 94 --------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-~~~~~~~~~Gs~ 137 (156)
T PF12850_consen 94 --------VQWDPAELREILSRENVDLVLHGHTHRPQVFK-IGGIHVINPGSI 137 (156)
T ss_dssp --------STTTHHHHHHHHHHTTSSEEEESSSSSEEEEE-ETTEEEEEE-GS
T ss_pred --------cccChhhhhhhhcccCCCEEEcCCcccceEEE-ECCEEEEECCcC
Confidence 01334456677789999999999988643333 334345544443
No 35
>PRK09453 phosphodiesterase; Provisional
Probab=99.10 E-value=2.8e-10 Score=100.24 Aligned_cols=69 Identities=22% Similarity=0.324 Sum_probs=54.7
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCC--------cHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQ--------SLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~--------s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
|++.++||+||++.++.++++.+...+.+.++++||++|+|++ ..+++..|..+ +..+++++||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~----~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY----ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc----CCceEEEccCCcch
Confidence 5799999999999999999988654566789999999999874 35566555432 34699999999975
Q ss_pred c
Q 020420 125 S 125 (326)
Q Consensus 125 ~ 125 (326)
.
T Consensus 77 ~ 77 (182)
T PRK09453 77 V 77 (182)
T ss_pred h
Confidence 3
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=99.05 E-value=4e-09 Score=90.63 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=48.3
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCC-CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
|++.++||+||++.++..+++..... ..+.++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 57999999999998877766655444 567788999999 467776665432 3599999999973
No 37
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=99.02 E-value=2.9e-10 Score=94.23 Aligned_cols=142 Identities=41% Similarity=0.673 Sum_probs=115.3
Q ss_pred ccccCChHHHHHHhchh-HHHH---HHHHhccCCcEEEEcC-cEEEecCCCCCCC-CChhhhccCCCCC--CCCCchhHH
Q 020420 127 NRVYGFYDECKRRFNVR-LWKI---FTDCFNCLPVAALIDE-KILCMHGGLSPDL-HNLNQIRSLPRPT--DVPESGLLC 198 (326)
Q Consensus 127 ~~~~gf~~e~~~~~~~~-~~~~---~~~~f~~LPlaa~i~~-~il~vHgGi~p~~-~~l~~i~~i~rp~--~~~~~~~~~ 198 (326)
...+++..++...++.. .|.. ..++|+.+|+.++++. ..+|.||++++.+ ..+++++.+.|.. .....+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~w~~~~g~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~ 83 (155)
T COG0639 4 TALYGFYDEKLRKYGEELEWLRAAGGLETFDSLPLAAVAEGGKLLCHHGGLSPGLDRLLDIIEVLDRLRACEVPHAGHTH 83 (155)
T ss_pred hhhhchhHHhhhhcCCceeeeeccchhhHHHhhhHHHHhcCCceeeecCCCCcchhhhHHHHHHHhhhhcccCCCccccc
Confidence 44567777766666544 5655 8999999999999988 8999999999976 6677777776654 555666677
Q ss_pred HHhhcCCCCC-CCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCC
Q 020420 199 DLLWSDPSND-IKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYC 269 (326)
Q Consensus 199 dlLWsDP~~~-~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~ 269 (326)
+.+|+++... ...|.++++|.+..| ++....|+..+..+.+.++|+.+..++...+.+..+|.||+++|+
T Consensus 84 ~~~~~~~~~~~~~~w~~~~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~d~~~~~~~~~lt~~~~~~~~ 154 (155)
T COG0639 84 DLLWSDPDGGDRRIWNPGPRGVPRDG-GDVTAVFGIVHTPKLIERAHVLYDIDTGAVFGGGLLTAFSAPNYC 154 (155)
T ss_pred cccCCCCCCCcccccccCCCCCCccc-cchhhHHhhhcccceEEEEeEEEecCceEEeCCCeeeEEeccccc
Confidence 7799999863 678888899998877 788888998888888999999999999887776899999999986
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.96 E-value=5.6e-09 Score=87.41 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=78.6
Q ss_pred cEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcH--HHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 54 PIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL--ETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 54 ~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
++.++||+||++. .....+.+.+|++||+++++..+- +.+.++..++ . ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~-------~~~~~~~D~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~----- 65 (135)
T cd07379 1 RFVCISDTHSRHR-------TISIPDGDVLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD----- 65 (135)
T ss_pred CEEEEeCCCCCCC-------cCcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC-----
Confidence 4789999999977 112344577889999999986432 2333333321 2 236789999996421
Q ss_pred ChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCC
Q 020420 132 FYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKG 211 (326)
Q Consensus 132 f~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~ 211 (326)
.-+.+++++||.+.+.... .+ +
T Consensus 66 ----------------------------~~~~~ilv~H~~p~~~~~~----------------------~~--~------ 87 (135)
T cd07379 66 ----------------------------PEDTDILVTHGPPYGHLDL----------------------VS--S------ 87 (135)
T ss_pred ----------------------------CCCCEEEEECCCCCcCccc----------------------cc--c------
Confidence 1244799999965321100 00 0
Q ss_pred cccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020420 212 WEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (326)
Q Consensus 212 ~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 252 (326)
....|...+.+++++.+.+++|-||.-.+.|++
T Consensus 88 --------~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~~~~ 120 (135)
T cd07379 88 --------GQRVGCEELLNRVQRVRPKLHVFGHIHEGYGAE 120 (135)
T ss_pred --------CcccCCHHHHHHHHHHCCcEEEEcCcCCcCcee
Confidence 123567889999999999999999999988876
No 39
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.85 E-value=3.4e-08 Score=90.24 Aligned_cols=71 Identities=10% Similarity=0.169 Sum_probs=56.6
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
+++.+++|+||++..+.++++.+.-...+.+|++||++++|+..-++..++..+. ..+..+++++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~-~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILG-EAHLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHH-hcCCceEEEcCCCChH
Confidence 5799999999999999999987644456788999999999976666666665553 2334699999999974
No 40
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.83 E-value=3.1e-08 Score=91.12 Aligned_cols=156 Identities=19% Similarity=0.252 Sum_probs=93.8
Q ss_pred cEEEEeCCCCCHHHHH-HHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccccccc----
Q 020420 54 PIKICGDIHGQYSDLL-RLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNR---- 128 (326)
Q Consensus 54 ~i~ViGDIHG~~~~L~-~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~---- 128 (326)
+++++|||||++.... +.++.. ..+.++++||+++. +.+++..|..+ +..++.++||||.+....
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~---~pD~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~~~~~~~k 71 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLL---QPDLVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWYDATFRKK 71 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhcc---CCCEEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccccccccch
Confidence 6899999999987642 344433 34678899999864 56666665443 345999999999754320
Q ss_pred ----------------ccC------------------------C-hHHHHHHhc-hhHHHHHHHHhccCCcEEEEcCcEE
Q 020420 129 ----------------VYG------------------------F-YDECKRRFN-VRLWKIFTDCFNCLPVAALIDEKIL 166 (326)
Q Consensus 129 ----------------~~g------------------------f-~~e~~~~~~-~~~~~~~~~~f~~LPlaa~i~~~il 166 (326)
.++ + ..++...|+ ....+.+...++.++.+......++
T Consensus 72 ~~~l~~~L~~lg~~~l~~~~~~~~~~~~~vvG~R~~~~~g~~~~~~~~vr~~fgi~s~~eA~~~ive~~~~~~~~~~~Vl 151 (238)
T cd07397 72 GDRVQEQLELLGDLHCGWGRLDFPPLPLSVVGGRPFSAGGGFWLSKKAVKAVYGVISLEESAQRIIAAAKKAPPDLPLIL 151 (238)
T ss_pred HHHHHHHHHHhCCcEEeecccccCCCCeEEEeeCCccCCCccccCHHHHHHHhCCCCHHHHHHHHHHHhhhcCCCCCeEE
Confidence 000 0 124555553 2455666777787864434345799
Q ss_pred EecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCC----CceEEE
Q 020420 167 CMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHD----LELICR 242 (326)
Q Consensus 167 ~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~----l~~iIR 242 (326)
+.|++++-.. ++.++ |+. ..|.+. +..+|...+.+-+++.. .++++-
T Consensus 152 iaH~~~~G~g---~~~~~--------------------~cg--~d~~~~----~~~~G~~~l~~ai~~~~~~~~~~l~~f 202 (238)
T cd07397 152 LAHNGPSGLG---SDAED--------------------PCG--RDWKPP----GGDWGDPDLALAISQIQQGRQVPLVVF 202 (238)
T ss_pred EeCcCCcCCC---ccccc--------------------ccc--cccCCc----CCCCCCHHHHHHHHHHhccCCCCEEEe
Confidence 9999986432 22111 111 122221 12466666666555544 799999
Q ss_pred eeeeec
Q 020420 243 AHQVVE 248 (326)
Q Consensus 243 gH~~~~ 248 (326)
||---.
T Consensus 203 GH~H~~ 208 (238)
T cd07397 203 GHMHHR 208 (238)
T ss_pred CCccCc
Confidence 986543
No 41
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.82 E-value=5.6e-08 Score=78.19 Aligned_cols=117 Identities=26% Similarity=0.372 Sum_probs=84.4
Q ss_pred EEEeCCCCCHHHHHHHH--HhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCCh
Q 020420 56 KICGDIHGQYSDLLRLF--EYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll--~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 133 (326)
+++||+|+......... ........+.+|++||+++.+....+...............++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD----------- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD----------- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce-----------
Confidence 47899999999988765 33333455678899999999998877655433334456678999999999
Q ss_pred HHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcc
Q 020420 134 DECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWE 213 (326)
Q Consensus 134 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~ 213 (326)
++++|+.+.+........
T Consensus 70 -------------------------------i~~~H~~~~~~~~~~~~~------------------------------- 87 (131)
T cd00838 70 -------------------------------ILLTHGPPYDPLDELSPD------------------------------- 87 (131)
T ss_pred -------------------------------EEEeccCCCCCchhhccc-------------------------------
Confidence 889999886542111000
Q ss_pred cCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020420 214 ANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (326)
Q Consensus 214 ~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 252 (326)
.......+...+.+.+.+.+|.||......+.
T Consensus 88 -------~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 88 -------EDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred -------chhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 00055678888899999999999998866554
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.60 E-value=5.1e-07 Score=78.55 Aligned_cols=65 Identities=23% Similarity=0.247 Sum_probs=45.7
Q ss_pred EEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCc-HHHHHHHHHHHhhCCCcEEEeCCcccccc
Q 020420 55 IKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS-LETICLLLAYKIKYPENFFLLRGNHECAS 125 (326)
Q Consensus 55 i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s-~evl~ll~~lk~~~p~~v~lLrGNHE~~~ 125 (326)
|+++||+||++..+.+ ......+.+.+|+.||++++|... .+.+..+. ..+..++.++||||...
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~l~----~~~~p~~~v~GNHD~~~ 66 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEADAVIVAGDITNFGGKEAAVEINLLL----AIGVPVLAVPGNCDTPE 66 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCCEEEECCCccCcCCHHHHHHHHHHH----hcCCCEEEEcCCCCCHH
Confidence 5789999999999877 222233457788999999998763 33332222 23456999999999743
No 43
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.57 E-value=4e-06 Score=73.93 Aligned_cols=59 Identities=19% Similarity=0.291 Sum_probs=42.2
Q ss_pred cEEEEeCCC-CCHH-----HHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 54 PIKICGDIH-GQYS-----DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 54 ~i~ViGDIH-G~~~-----~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
.|.||||.| |.-. .+.++++. .+.+.++++||+++ .+++.++..+. ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQHVLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCEEEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 5533 35555544 34577889999986 77777665542 2599999999964
No 44
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.53 E-value=1.7e-06 Score=79.60 Aligned_cols=204 Identities=17% Similarity=0.223 Sum_probs=103.1
Q ss_pred CcEEEEeCCCCC------HHHHHHHHHhCCCCCCCceeeecCccCC--C-----CCcHHHHHHHHHHHhhCCCcEEEeCC
Q 020420 53 APIKICGDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDR--G-----KQSLETICLLLAYKIKYPENFFLLRG 119 (326)
Q Consensus 53 ~~i~ViGDIHG~------~~~L~~ll~~~g~~~~~~~vfLGD~VDR--G-----~~s~evl~ll~~lk~~~p~~v~lLrG 119 (326)
|++++++|+|.. ...+.+.|+.. ....+.++++||++|. | +...+++.+|..++ ..+..+++++|
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~-~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~-~~g~~v~~v~G 78 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGE-ARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALS-DSGVPCYFMHG 78 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhh-hccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHH-HcCCeEEEEeC
Confidence 579999999954 23455555432 1345678889999985 2 23456666666665 23357999999
Q ss_pred cccccccccccCChHHHHHHhchhHHHHHHHHhccCC--cEEEEcC-cEEEecCCCCCCCC-ChhhhccCCC-CC-----
Q 020420 120 NHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP--VAALIDE-KILCMHGGLSPDLH-NLNQIRSLPR-PT----- 189 (326)
Q Consensus 120 NHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP--laa~i~~-~il~vHgGi~p~~~-~l~~i~~i~r-p~----- 189 (326)
|||..... ...+..+. ..+| ....+++ +++++||-..+.-. .-..++++-| |.
T Consensus 79 NHD~~~~~-------~~~~~~g~----------~~l~~~~~~~~~g~~i~l~HGd~~~~~d~~y~~~r~~~r~~~~~~~~ 141 (241)
T PRK05340 79 NRDFLLGK-------RFAKAAGM----------TLLPDPSVIDLYGQRVLLLHGDTLCTDDKAYQRFRRKVRNPWLQWLF 141 (241)
T ss_pred CCchhhhH-------HHHHhCCC----------EEeCCcEEEEECCEEEEEECCcccccCCHHHHHHHHHHhCHHHHHHH
Confidence 99974311 11111111 2222 2223344 69999998764211 1111222211 10
Q ss_pred -CCCCchhHHHHhh--cCCCCCCCCcccCCCCce--eecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEec
Q 020420 190 -DVPESGLLCDLLW--SDPSNDIKGWEANDRGVS--YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFS 264 (326)
Q Consensus 190 -~~~~~~~~~dlLW--sDP~~~~~~~~~n~rg~g--~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifS 264 (326)
..| .....++-+ +.-+ ...+.+... ....++++.+.+++.+.+.+|-||.-.+.=.....++.-++-.+
T Consensus 142 ~~~p-~~~~~~ia~~~~~~s-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~~~~~~~~~~~~~~ 215 (241)
T PRK05340 142 LALP-LSIRLRIAAKMRAKS-----KAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAIHQLQAGGQPATRIV 215 (241)
T ss_pred HhCC-HHHHHHHHHHHHHHH-----HHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcceeeccCCCcceEEEE
Confidence 000 000011100 0000 000011111 22355778889999999999999998754333323321122222
Q ss_pred CCCCCCCCCCeEEEEEEcCCc
Q 020420 265 APNYCGEFDNAGAMMSVDETL 285 (326)
Q Consensus 265 a~~Y~~~~~n~ga~l~i~~~~ 285 (326)
-++. ...+.++.++++.
T Consensus 216 lgdw----~~~~~~~~~~~~~ 232 (241)
T PRK05340 216 LGDW----HEQGSVLKVDADG 232 (241)
T ss_pred eCCC----CCCCeEEEEECCc
Confidence 2222 1237778887764
No 45
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.49 E-value=6.1e-07 Score=77.45 Aligned_cols=67 Identities=25% Similarity=0.249 Sum_probs=47.1
Q ss_pred EEEEeCCCCCHHHHHHHHH-hCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 55 IKICGDIHGQYSDLLRLFE-YGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 55 i~ViGDIHG~~~~L~~ll~-~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
+.++||+|++...+...+. .......+.++++||+++++.....+. ++. ....+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~~~~~~~-~~~--~~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTDAPRFAP-LLL--ALKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcchHHHHH-HHH--hhcCCccEEEeCCCcceE
Confidence 4689999999887766552 223344566888999999987665543 222 223456799999999975
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.43 E-value=2.2e-06 Score=71.50 Aligned_cols=107 Identities=19% Similarity=0.201 Sum_probs=73.9
Q ss_pred EEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHH
Q 020420 56 KICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDE 135 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e 135 (326)
.|+||.||..+.+.++... ..+.+.++++||+. .+++..+..+ .+..++.++||||
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~ii~~GD~~------~~~~~~~~~~---~~~~~~~V~GN~D------------- 56 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDLILSAGDLP------KEYLEYLVTM---LNVPVYYVHGNHD------------- 56 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCEEEECCCCC------hHHHHHHHHH---cCCCEEEEeCCCc-------------
Confidence 4899999998888777665 35567899999973 3445555444 1334899999999
Q ss_pred HHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcccC
Q 020420 136 CKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEAN 215 (326)
Q Consensus 136 ~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n 215 (326)
-+++++|+-+.+. .... +
T Consensus 57 ---------------------------~~Ilv~H~pp~~~-~~~~------------------~---------------- 74 (129)
T cd07403 57 ---------------------------VDILLTHAPPAGI-GDGE------------------D---------------- 74 (129)
T ss_pred ---------------------------cCEEEECCCCCcC-cCcc------------------c----------------
Confidence 4789999743210 0000 0
Q ss_pred CCCceeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020420 216 DRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (326)
Q Consensus 216 ~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 252 (326)
...-|.+++.+++++.+.+.++-||.-.+..+.
T Consensus 75 ----~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 75 ----FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred ----ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 011355678889999999999999998876665
No 47
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.28 E-value=1.5e-05 Score=66.91 Aligned_cols=117 Identities=22% Similarity=0.242 Sum_probs=72.4
Q ss_pred EEEEeCCCCCHH------H----HHHHHHhCCCCCCCceeeecCccCCCCCc-H-HHHHHHHHHHhhCCCcEEEeCCccc
Q 020420 55 IKICGDIHGQYS------D----LLRLFEYGGLPPRSNYLFLGDYVDRGKQS-L-ETICLLLAYKIKYPENFFLLRGNHE 122 (326)
Q Consensus 55 i~ViGDIHG~~~------~----L~~ll~~~g~~~~~~~vfLGD~VDRG~~s-~-evl~ll~~lk~~~p~~v~lLrGNHE 122 (326)
++.++|+|=... . |.++++...-...+.++++||+++.|... . +...++-.+.... ..+++++||||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNHD 79 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNHD 79 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCCe
Confidence 467899993211 1 22234444334457788999999998742 1 2223333332111 36999999999
Q ss_pred ccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhh
Q 020420 123 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLW 202 (326)
Q Consensus 123 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLW 202 (326)
. ++++|..+.+.-...
T Consensus 80 ~-----------------------------------------iv~~Hhp~~~~~~~~----------------------- 95 (144)
T cd07400 80 V-----------------------------------------IVVLHHPLVPPPGSG----------------------- 95 (144)
T ss_pred E-----------------------------------------EEEecCCCCCCCccc-----------------------
Confidence 7 888997765321000
Q ss_pred cCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020420 203 SDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (326)
Q Consensus 203 sDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 252 (326)
. .. .. +.+.+.+++++.++++++-||.-.+..+.
T Consensus 96 ---~-------~~-----~~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~~ 129 (144)
T cd07400 96 ---R-------ER-----LL-DAGDALKLLAEAGVDLVLHGHKHVPYVGN 129 (144)
T ss_pred ---c-------cc-----CC-CHHHHHHHHHHcCCCEEEECCCCCcCeee
Confidence 0 00 00 55678889999999999999998865554
No 48
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.27 E-value=5.4e-05 Score=68.52 Aligned_cols=194 Identities=15% Similarity=0.129 Sum_probs=96.4
Q ss_pred cEEEEeCCCCC----HHHH----HHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhh--CCCcEEEeCCcccc
Q 020420 54 PIKICGDIHGQ----YSDL----LRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIK--YPENFFLLRGNHEC 123 (326)
Q Consensus 54 ~i~ViGDIHG~----~~~L----~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~--~p~~v~lLrGNHE~ 123 (326)
+++++||+|-- ...+ ..+.+...-...+.+|++||++|.+....+--.+.-.++.. .+-.++.++||||.
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~GNHD~ 81 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYSVLAGNHDL 81 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEEEECCCCcc
Confidence 57899999952 2223 23334332233466889999999998433221122222221 23458999999994
Q ss_pred cccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhc
Q 020420 124 ASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWS 203 (326)
Q Consensus 124 ~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWs 203 (326)
.. ...+.. ..+-++-+.+.++.-|- ..-++++|-=+.+.-...+ ...|.
T Consensus 82 ~~-~ld~~~--------~~~ql~WL~~~L~~~~~----~~~iv~~H~p~~~~~~~~~------------------~~~~~ 130 (214)
T cd07399 82 VL-ALEFGP--------RDEVLQWANEVLKKHPD----RPAILTTHAYLNCDDSRPD------------------SIDYD 130 (214)
T ss_pred hh-hCCCCC--------CHHHHHHHHHHHHHCCC----CCEEEEecccccCCCCcCc------------------ccccc
Confidence 32 111111 12233334444443331 1247788864432110000 00010
Q ss_pred CCCCCCCCcccCCCCceeecChHHHHHHHHhC-CCceEEEeeeeeccceEEe-----cCCeEEEEecCCCCCCCCCCeE-
Q 020420 204 DPSNDIKGWEANDRGVSYVFGADRVTEFLQKH-DLELICRAHQVVEDGYEFF-----ANRRLITIFSAPNYCGEFDNAG- 276 (326)
Q Consensus 204 DP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~-~l~~iIRgH~~~~~G~~~~-----~~~~~iTifSa~~Y~~~~~n~g- 276 (326)
+ ...-+.+.+.+.++++ ++++++-||.-.. +.... .++.+..+.+........+|..
T Consensus 131 ~---------------~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~-~~~~~~~~~~~g~~v~~~~~~~q~~~~~g~~~~ 194 (214)
T cd07399 131 S---------------DVNDGQQIWDKLVKKNDNVFMVLSGHVHGA-GRTTLVSVGDAGRTVHQMLADYQGEPNGGNGFL 194 (214)
T ss_pred c---------------ccccHHHHHHHHHhCCCCEEEEEccccCCC-ceEEEcccCCCCCEeeEEeecccCCCCCCcceE
Confidence 0 1123445677888888 7999999997653 33322 1334555544322111112211
Q ss_pred EEEEEcCCc-ceEEEEecc
Q 020420 277 AMMSVDETL-MCSFQILKP 294 (326)
Q Consensus 277 a~l~i~~~~-~~~~~~~~~ 294 (326)
.++.++++. ++.+..+.|
T Consensus 195 r~~~f~~~~~~i~~~tysp 213 (214)
T cd07399 195 RLLEFDPDNNKIDVRTYSP 213 (214)
T ss_pred EEEEEecCCCEEEEEeCCC
Confidence 355666663 666666654
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.25 E-value=7.3e-06 Score=74.95 Aligned_cols=205 Identities=14% Similarity=0.156 Sum_probs=99.3
Q ss_pred EEEEeCCCCCH------HHHHHHHHhCCCCCCCceeeecCccCCC--C---C--cHHHHHHHHHHHhhCCCcEEEeCCcc
Q 020420 55 IKICGDIHGQY------SDLLRLFEYGGLPPRSNYLFLGDYVDRG--K---Q--SLETICLLLAYKIKYPENFFLLRGNH 121 (326)
Q Consensus 55 i~ViGDIHG~~------~~L~~ll~~~g~~~~~~~vfLGD~VDRG--~---~--s~evl~ll~~lk~~~p~~v~lLrGNH 121 (326)
+++++|+|... ..+.+.+.... ...+.++++||++|.. . . ..++...+..|+. .+..++.+.|||
T Consensus 1 ~~~iSDlHl~~~~~~~~~~~l~~l~~~~-~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~-~~~~v~~v~GNH 78 (231)
T TIGR01854 1 TLFISDLHLSPERPDITALFLDFLREEA-RKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSD-QGVPCYFMHGNR 78 (231)
T ss_pred CeEEEecCCCCCChhHHHHHHHHHHhhh-ccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHH-CCCeEEEEcCCC
Confidence 36899999542 23445554432 1456788899999952 1 1 1344555555542 345799999999
Q ss_pred cccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEE-cCcEEEecCCCCCC-CCChhhhccC-CCCC------CCC
Q 020420 122 ECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI-DEKILCMHGGLSPD-LHNLNQIRSL-PRPT------DVP 192 (326)
Q Consensus 122 E~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i-~~~il~vHgGi~p~-~~~l~~i~~i-~rp~------~~~ 192 (326)
|...-. ...+..+. .++.. |....+ +.+++++||-.-.. -....-.+++ ..|. ..|
T Consensus 79 D~~~~~-------~~~~~~gi-------~~l~~-~~~~~~~g~~ill~HGd~~~~~d~~y~~~r~~~r~~~~~~~~~~l~ 143 (231)
T TIGR01854 79 DFLIGK-------RFAREAGM-------TLLPD-PSVIDLYGQKVLLMHGDTLCTDDTAYQAFRAKVHQPWLQRLFLHLP 143 (231)
T ss_pred chhhhH-------HHHHHCCC-------EEECC-CEEEEECCEEEEEEcCccccCCCHHHHHHHHHHhCHHHHHHHHhCC
Confidence 974210 00010110 11111 112222 34799999975421 0111111111 1110 001
Q ss_pred --CchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCC
Q 020420 193 --ESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCG 270 (326)
Q Consensus 193 --~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~ 270 (326)
....+...+|+..... . ......-....+..+.+++++.+.+++|-||.-.+.-+.+..++.-.+-.+-++..
T Consensus 144 ~~~r~~l~~~~~~~s~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GHtH~~~~~~~~~~~~~~~~~~lgdW~- 218 (231)
T TIGR01854 144 LAVRVKLARKIRAESRAD-K---QMKSQDIMDVNPAEVAAVMRRYGVDRLIHGHTHRPAIHPLQADGQPATRIVLGDWY- 218 (231)
T ss_pred HHHHHHHHHHHHHHHHHh-c---CCCcchhhCCCHHHHHHHHHHcCCCEEEECCccCcceeecccCCCccEEEEECCCc-
Confidence 0112223333322110 0 00000112335677889999999999999999875544433333223444444432
Q ss_pred CCCCeEEEEEEcCC
Q 020420 271 EFDNAGAMMSVDET 284 (326)
Q Consensus 271 ~~~n~ga~l~i~~~ 284 (326)
..+.++.++++
T Consensus 219 ---~~~~~~~~~~~ 229 (231)
T TIGR01854 219 ---RQGSILRVDAD 229 (231)
T ss_pred ---cCCeEEEEcCC
Confidence 23566666654
No 50
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.16 E-value=9.5e-05 Score=64.96 Aligned_cols=158 Identities=16% Similarity=0.134 Sum_probs=95.1
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCC
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGF 132 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf 132 (326)
+++.|+||.||...+..+..+.......+.+|.+||++..... ..+-. ....+++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~~~----- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEVDQ----- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcccc-----
Confidence 6799999999999765666665555566778899999976542 11111 0246799999999986433
Q ss_pred hHHHHHHhchhHHHHHHHHhccCCcE--EEEc-CcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCC
Q 020420 133 YDECKRRFNVRLWKIFTDCFNCLPVA--ALID-EKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDI 209 (326)
Q Consensus 133 ~~e~~~~~~~~~~~~~~~~f~~LPla--a~i~-~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~ 209 (326)
..+|-. ..++ -+++++||.....
T Consensus 69 --------------------~~~p~~~~~~~~g~ki~l~HGh~~~~---------------------------------- 94 (172)
T COG0622 69 --------------------EELPEELVLEVGGVKIFLTHGHLYFV---------------------------------- 94 (172)
T ss_pred --------------------ccCChhHeEEECCEEEEEECCCcccc----------------------------------
Confidence 122322 2334 4899999965421
Q ss_pred CCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEE--ecCCCCCCCCCCeEEEEEEcCC-cc
Q 020420 210 KGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITI--FSAPNYCGEFDNAGAMMSVDET-LM 286 (326)
Q Consensus 210 ~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTi--fSa~~Y~~~~~n~ga~l~i~~~-~~ 286 (326)
......++.+-+..+.+.+|.||+-.+.=+ .. ++ ++-| =|.+.+-+ ++..+++.++.+ .+
T Consensus 95 ------------~~~~~~l~~la~~~~~Dvli~GHTH~p~~~-~~-~~-i~~vNPGS~s~pr~--~~~~sy~il~~~~~~ 157 (172)
T COG0622 95 ------------KTDLSLLEYLAKELGADVLIFGHTHKPVAE-KV-GG-ILLVNPGSVSGPRG--GNPASYAILDVDNLE 157 (172)
T ss_pred ------------ccCHHHHHHHHHhcCCCEEEECCCCcccEE-EE-CC-EEEEcCCCcCCCCC--CCCcEEEEEEcCCCE
Confidence 012235666777888999999999875332 22 22 2211 23444433 244455555444 45
Q ss_pred eEEEEecc
Q 020420 287 CSFQILKP 294 (326)
Q Consensus 287 ~~~~~~~~ 294 (326)
+....+..
T Consensus 158 ~~~~~~~~ 165 (172)
T COG0622 158 VEVLFLER 165 (172)
T ss_pred EEEEEeec
Confidence 55555543
No 51
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.15 E-value=3.1e-06 Score=76.12 Aligned_cols=71 Identities=28% Similarity=0.246 Sum_probs=51.1
Q ss_pred CcEEEEeCCCCCHH----HHHHHHHhCCCCCCCceeeecCccCCCCCcH-HHHHHHHHHHhhCCCcEEEeCCcccccc
Q 020420 53 APIKICGDIHGQYS----DLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL-ETICLLLAYKIKYPENFFLLRGNHECAS 125 (326)
Q Consensus 53 ~~i~ViGDIHG~~~----~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll~~lk~~~p~~v~lLrGNHE~~~ 125 (326)
+++++++|+|+... .+.++++.+.-...+.+++.||++|.+.... ++..++..+. .+..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~~~~~~~l~~l~--~~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVDVLELLLELLKKLK--APLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcchhhHHHHHHHhccC--CCCCEEEECCCccccc
Confidence 57999999998743 5667776654444567888999999988765 4444444332 3456999999999753
No 52
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.09 E-value=6.9e-06 Score=77.04 Aligned_cols=70 Identities=21% Similarity=0.096 Sum_probs=49.7
Q ss_pred CcEEEEeCCCCC----HHHHHHHHHhCCCCCCCceeeecCccCCC-C-CcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 53 APIKICGDIHGQ----YSDLLRLFEYGGLPPRSNYLFLGDYVDRG-K-QSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 53 ~~i~ViGDIHG~----~~~L~~ll~~~g~~~~~~~vfLGD~VDRG-~-~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
.++++++|+|.. ...+.++++...-...+-++++||++|++ + ...++...|..|+.. ..++.+.||||..
T Consensus 50 ~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~~~~~~~~~~~L~~L~~~--~pv~~V~GNHD~~ 125 (271)
T PRK11340 50 FKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFSDVLSPLAEC--APTFACFGNHDRP 125 (271)
T ss_pred cEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCccccHHHHHHHHHHHhhc--CCEEEecCCCCcc
Confidence 579999999976 55577777665444556788899999954 2 223455556666543 3599999999974
No 53
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=98.03 E-value=0.0003 Score=62.60 Aligned_cols=70 Identities=13% Similarity=0.052 Sum_probs=43.6
Q ss_pred CcEEEEeCCCCCHH------------HHHHHHHhCCCCCCCceeeecCccCCCCCc---HHHHHHHHHHHhhCCCcEEEe
Q 020420 53 APIKICGDIHGQYS------------DLLRLFEYGGLPPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKYPENFFLL 117 (326)
Q Consensus 53 ~~i~ViGDIHG~~~------------~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~~v~lL 117 (326)
.++++++|+|-... .+..+.+.+.....+.+|++||+++.+... .+.+..++.......-.++++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~ 82 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAAT 82 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 46899999996221 111222222223446788999999977653 455555444333344569999
Q ss_pred CCccc
Q 020420 118 RGNHE 122 (326)
Q Consensus 118 rGNHE 122 (326)
.||||
T Consensus 83 ~GNHD 87 (199)
T cd07383 83 FGNHD 87 (199)
T ss_pred CccCC
Confidence 99999
No 54
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.92 E-value=2e-05 Score=72.24 Aligned_cols=68 Identities=22% Similarity=0.171 Sum_probs=47.7
Q ss_pred cEEEEeCCCCCH------HHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 54 PIKICGDIHGQY------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 54 ~i~ViGDIHG~~------~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
++.+++|+|+++ ..+.++++.+.-...+-+|+.||++++.+.+.+++..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 578999999763 22555666554344567888999999876666655554442 345699999999975
No 55
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.85 E-value=0.00039 Score=64.42 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=43.1
Q ss_pred cEEEEeCCCCCH----------------HHHHHHHHhCCC--CCCCceeeecCccCCCCCcH---HHHHHHHH-HHh-hC
Q 020420 54 PIKICGDIHGQY----------------SDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL---ETICLLLA-YKI-KY 110 (326)
Q Consensus 54 ~i~ViGDIHG~~----------------~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~---evl~ll~~-lk~-~~ 110 (326)
+++++||+|-.. ..|.++++.+.- +..+-+|++||+++.|...- +....+.. ++. ..
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 578889998763 234555555432 24456778999999887541 11122211 121 12
Q ss_pred CCcEEEeCCccccc
Q 020420 111 PENFFLLRGNHECA 124 (326)
Q Consensus 111 p~~v~lLrGNHE~~ 124 (326)
+-.++.++||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 34699999999974
No 56
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.80 E-value=5.8e-05 Score=70.48 Aligned_cols=73 Identities=21% Similarity=0.181 Sum_probs=48.6
Q ss_pred cEEEEeCCC--C-----------CHHHHHHHHHhCCCCCCCceeeecCccCCCCC-cHHHHHHHHHHHhhCCCcEEEeCC
Q 020420 54 PIKICGDIH--G-----------QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQ-SLETICLLLAYKIKYPENFFLLRG 119 (326)
Q Consensus 54 ~i~ViGDIH--G-----------~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~-s~evl~ll~~lk~~~p~~v~lLrG 119 (326)
++.+++|+| . ....|.++++.+.....+-+|++||+++.|.. +.+-+..+.+.-...+-.++.+.|
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~G 81 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVLG 81 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEecC
Confidence 688999999 2 24566777766643445678899999998873 223333333332233456999999
Q ss_pred ccccccc
Q 020420 120 NHECASV 126 (326)
Q Consensus 120 NHE~~~~ 126 (326)
|||....
T Consensus 82 NHD~~~~ 88 (267)
T cd07396 82 NHDLYNP 88 (267)
T ss_pred ccccccc
Confidence 9998643
No 57
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.77 E-value=6e-05 Score=70.07 Aligned_cols=72 Identities=22% Similarity=0.245 Sum_probs=47.6
Q ss_pred CcEEEEeCCCC-C-----------HHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHH----HHHHHHhhCCCcEEE
Q 020420 53 APIKICGDIHG-Q-----------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETIC----LLLAYKIKYPENFFL 116 (326)
Q Consensus 53 ~~i~ViGDIHG-~-----------~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~----ll~~lk~~~p~~v~l 116 (326)
|+++.++|+|- . ...|.++++.+.-...+.+++.||++|+...+.+... ++..|+-..|-.+++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~~ 80 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIVV 80 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEEE
Confidence 57899999993 2 2345555554433445678899999999866654432 333333222357999
Q ss_pred eCCccccc
Q 020420 117 LRGNHECA 124 (326)
Q Consensus 117 LrGNHE~~ 124 (326)
+.||||..
T Consensus 81 i~GNHD~~ 88 (253)
T TIGR00619 81 ISGNHDSA 88 (253)
T ss_pred EccCCCCh
Confidence 99999975
No 58
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=97.69 E-value=2.7e-06 Score=84.14 Aligned_cols=239 Identities=13% Similarity=0.023 Sum_probs=159.9
Q ss_pred ccCCHHHHHHHHHHHHHHHhhCCCeeeecC----cEEEEeCCCCCHHHHHHHHHhCCCCCCC-ceeeecCccCCCCCcHH
Q 020420 24 VQLSESEIRQLCVVSKGIFLRQPNLLEIEA----PIKICGDIHGQYSDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQSLE 98 (326)
Q Consensus 24 ~~l~~~~~~~l~~~a~~il~~ep~ll~l~~----~i~ViGDIHG~~~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s~e 98 (326)
..|...++..++.-+.++++.+|+...+.. -.+.++|.||.+.|+.++++.- |... -|++-|++++++....+
T Consensus 13 ~~l~~~~fd~avdlysKaI~ldpnca~~~anRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~~~~ 90 (476)
T KOG0376|consen 13 EALKDKVFDVAVDLYSKAIELDPNCAIYFANRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGEFKK 90 (476)
T ss_pred hhcccchHHHHHHHHHHHHhcCCcceeeechhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHHHHH
Confidence 456778899999999999999998888743 4889999999999999998863 4433 48999999999999999
Q ss_pred HHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhch---hHHHHHHHHhccCC-cEEEEcCcEEEecCCCCC
Q 020420 99 TICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNV---RLWKIFTDCFNCLP-VAALIDEKILCMHGGLSP 174 (326)
Q Consensus 99 vl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~---~~~~~~~~~f~~LP-laa~i~~~il~vHgGi~p 174 (326)
.+..+...+...|+...+.|++||+..+...++|..+....++. .+...+... .++ ++....+.+ .-|.-+.-
T Consensus 91 A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~--~~~~i~~~y~g~~-le~~kvt~ 167 (476)
T KOG0376|consen 91 ALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEE--DMDLIESDYSGPV-LEDHKVTL 167 (476)
T ss_pred HHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccccc--cccccccccCCcc-cccchhhH
Confidence 99999999999999999999999999888888887666555521 122212211 111 333333221 11111110
Q ss_pred C--------------C-----CC-hhh----hccCCCCCCCCCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHH
Q 020420 175 D--------------L-----HN-LNQ----IRSLPRPTDVPESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTE 230 (326)
Q Consensus 175 ~--------------~-----~~-l~~----i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~ 230 (326)
. + .+ +++ .+.+..+.+.. .-.+..|+++......+....++.+...++..+..
T Consensus 168 e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~---~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ 244 (476)
T KOG0376|consen 168 EFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEIS---VPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNP 244 (476)
T ss_pred HHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEee---cCCCceEEecCCccccccchhhhHhhcCCCCCccc
Confidence 0 0 00 011 11111121111 33567888887554445555677777888888999
Q ss_pred HHHhCCCceEEEeeeee------------ccceEEecC---CeEEEEecCCCCCC
Q 020420 231 FLQKHDLELICRAHQVV------------EDGYEFFAN---RRLITIFSAPNYCG 270 (326)
Q Consensus 231 fl~~~~l~~iIRgH~~~------------~~G~~~~~~---~~~iTifSa~~Y~~ 270 (326)
|+.+.++.-+++.|.-+ ..+|...++ +.++++|+.+.++.
T Consensus 245 ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~ 299 (476)
T KOG0376|consen 245 YLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVK 299 (476)
T ss_pred ccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchh
Confidence 99999999988888543 223322222 24889999998874
No 59
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.68 E-value=8.6e-05 Score=71.95 Aligned_cols=72 Identities=24% Similarity=0.345 Sum_probs=48.3
Q ss_pred CcEEEEeCCC-C-----------CHHHHHHHHHhCCCCCCCceeeecCccCCC-CCcHHHHHHHHH--HH--hhCCCcEE
Q 020420 53 APIKICGDIH-G-----------QYSDLLRLFEYGGLPPRSNYLFLGDYVDRG-KQSLETICLLLA--YK--IKYPENFF 115 (326)
Q Consensus 53 ~~i~ViGDIH-G-----------~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG-~~s~evl~ll~~--lk--~~~p~~v~ 115 (326)
|+++.+||+| | ....|.++++.+.-...+.+|+.||++|+. +.+.+++.++.. ++ ...+-.++
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v~ 80 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITLH 80 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 5789999999 3 234455565555444557788999999985 455555444433 21 12355799
Q ss_pred EeCCccccc
Q 020420 116 LLRGNHECA 124 (326)
Q Consensus 116 lLrGNHE~~ 124 (326)
++.||||..
T Consensus 81 ~I~GNHD~~ 89 (340)
T PHA02546 81 VLVGNHDMY 89 (340)
T ss_pred EEccCCCcc
Confidence 999999974
No 60
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.65 E-value=0.00015 Score=63.24 Aligned_cols=57 Identities=19% Similarity=0.144 Sum_probs=33.4
Q ss_pred HHHHHHhCCCCCCCceeeecCccCCCCCcH-HHHHHH-HHHHhhCCCcEEEeCCccccc
Q 020420 68 LLRLFEYGGLPPRSNYLFLGDYVDRGKQSL-ETICLL-LAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 68 L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~-evl~ll-~~lk~~~p~~v~lLrGNHE~~ 124 (326)
+.++.+.+...+.+.+|++||++|...... +....+ +......+..+++++||||..
T Consensus 30 ~~~l~~~~~~~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 30 LERLDRLIEEYGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHHHhcCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 344444433344578999999998754332 211111 111223455799999999975
No 61
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.64 E-value=0.00017 Score=65.54 Aligned_cols=69 Identities=22% Similarity=0.232 Sum_probs=45.0
Q ss_pred cEEEEeCCCCC------------HHHHHHHHHhCCCC--CCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCC
Q 020420 54 PIKICGDIHGQ------------YSDLLRLFEYGGLP--PRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRG 119 (326)
Q Consensus 54 ~i~ViGDIHG~------------~~~L~~ll~~~g~~--~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrG 119 (326)
++++++|+|=. ...|.++++.+.-. ..+-+|++||+++.|... ....+.......+-.++.++|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~~~--~~~~~~~~l~~~~~p~~~v~G 78 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGSPE--SYERLRELLAALPIPVYLLPG 78 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCCHH--HHHHHHHHHhhcCCCEEEeCC
Confidence 57899999944 34567777754332 456788999999987532 222222222223556999999
Q ss_pred ccccc
Q 020420 120 NHECA 124 (326)
Q Consensus 120 NHE~~ 124 (326)
|||..
T Consensus 79 NHD~~ 83 (240)
T cd07402 79 NHDDR 83 (240)
T ss_pred CCCCH
Confidence 99974
No 62
>PRK04036 DNA polymerase II small subunit; Validated
Probab=97.63 E-value=0.00014 Score=74.17 Aligned_cols=113 Identities=17% Similarity=0.218 Sum_probs=59.6
Q ss_pred CcEEEEeCCC-CCH----HHHHHHHHhCC-C--------CCCCceeeecCccCC-CCCc---------------HHHHHH
Q 020420 53 APIKICGDIH-GQY----SDLLRLFEYGG-L--------PPRSNYLFLGDYVDR-GKQS---------------LETICL 102 (326)
Q Consensus 53 ~~i~ViGDIH-G~~----~~L~~ll~~~g-~--------~~~~~~vfLGD~VDR-G~~s---------------~evl~l 102 (326)
..+++++|+| |.- ..+..+++.+. . ...+.+|++||++|. |.+. .++..+
T Consensus 244 ~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~~~ 323 (504)
T PRK04036 244 VYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAAEY 323 (504)
T ss_pred cEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHHHH
Confidence 5689999999 652 22344433322 1 223578899999995 3211 123344
Q ss_pred HHHHHhhCCCcEEEeCCccccccccccc-CChHHHHHHhchhHHHHHHHHhccCCcEEEEcC-cEEEecCCC
Q 020420 103 LLAYKIKYPENFFLLRGNHECASVNRVY-GFYDECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGL 172 (326)
Q Consensus 103 l~~lk~~~p~~v~lLrGNHE~~~~~~~~-gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi 172 (326)
|..+. ..-.+++++||||........ .+...+...+.. .-..++.. |....+++ +++++||-.
T Consensus 324 L~~L~--~~i~V~~ipGNHD~~~~~lPQ~~l~~~l~~~l~~----~~v~~lsN-P~~i~l~G~~iLl~HG~~ 388 (504)
T PRK04036 324 LKQIP--EDIKIIISPGNHDAVRQAEPQPAFPEEIRSLFPE----HNVTFVSN-PALVNLHGVDVLIYHGRS 388 (504)
T ss_pred HHhhh--cCCeEEEecCCCcchhhccCCCCccHHHHHhcCc----CCeEEecC-CeEEEECCEEEEEECCCC
Confidence 44432 334699999999975432211 122221111110 11233334 65444454 688999865
No 63
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=97.56 E-value=0.011 Score=53.69 Aligned_cols=206 Identities=18% Similarity=0.179 Sum_probs=114.6
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCcc--CCCCCcHHHHHH-HHHHHhhCCCcEEEeCCccccccccc
Q 020420 52 EAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYV--DRGKQSLETICL-LLAYKIKYPENFFLLRGNHECASVNR 128 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~V--DRG~~s~evl~l-l~~lk~~~p~~v~lLrGNHE~~~~~~ 128 (326)
.+++..+.|+||.++.+.++++.+.....+-+|+.||+. +.|+.-.-.-.. +-.++ .....++.++||.|...+-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~~~~~~~~~e~l~-~~~~~v~avpGNcD~~~v~~ 81 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKEVAEELNKLEALK-ELGIPVLAVPGNCDPPEVID 81 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchHHHHhhhHHHHHH-hcCCeEEEEcCCCChHHHHH
Confidence 478999999999999999999987766667788899999 888743222110 23332 34567999999988764332
Q ss_pred ccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCC-C-----ChhhhccCCCCCCCCCchhHHHHhh
Q 020420 129 VYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL-H-----NLNQIRSLPRPTDVPESGLLCDLLW 202 (326)
Q Consensus 129 ~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~-~-----~l~~i~~i~rp~~~~~~~~~~dlLW 202 (326)
.....+..+. +-...+++-.+|-=||..|.. . +.++|.+..+...........=++.
T Consensus 82 -------~l~~~~~~v~----------~~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~~~~Il~~ 144 (226)
T COG2129 82 -------VLKNAGVNVH----------GRVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADNPVNILLT 144 (226)
T ss_pred -------HHHhcccccc----------cceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccCcceEEEe
Confidence 1111111111 122234433445457776542 1 1223322111000000000000011
Q ss_pred cCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEc
Q 020420 203 SDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVD 282 (326)
Q Consensus 203 sDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~ 282 (326)
--|+... ...++-| -.--|..+++++.++.+-.+.|.||=-...|++.-.+ ||+-.|.=.+ .-+.|++.++
T Consensus 145 HaPP~gt--~~d~~~g-~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d~iG~----TivVNPG~~~--~g~yA~i~l~ 215 (226)
T COG2129 145 HAPPYGT--LLDTPSG-YVHVGSKAVRKLIEEFQPLLGLHGHIHESRGIDKIGN----TIVVNPGPLG--EGRYALIELE 215 (226)
T ss_pred cCCCCCc--cccCCCC-ccccchHHHHHHHHHhCCceEEEeeecccccccccCC----eEEECCCCcc--CceEEEEEec
Confidence 1111100 0001122 1345899999999999999999999777778775433 5566654332 3467788887
Q ss_pred CC
Q 020420 283 ET 284 (326)
Q Consensus 283 ~~ 284 (326)
++
T Consensus 216 ~~ 217 (226)
T COG2129 216 KE 217 (226)
T ss_pred Cc
Confidence 76
No 64
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.54 E-value=0.00086 Score=57.77 Aligned_cols=47 Identities=26% Similarity=0.286 Sum_probs=29.3
Q ss_pred CCCceeeecCccCCCCCcH-HHH-HHHHHHHhh---C-CCcEEEeCCcccccc
Q 020420 79 PRSNYLFLGDYVDRGKQSL-ETI-CLLLAYKIK---Y-PENFFLLRGNHECAS 125 (326)
Q Consensus 79 ~~~~~vfLGD~VDRG~~s~-evl-~ll~~lk~~---~-p~~v~lLrGNHE~~~ 125 (326)
..+.+|++||++|.+...- +.. ..+..++.. . +..++++.||||...
T Consensus 38 ~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 38 QPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred CCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4567899999999876432 222 222222221 1 346999999999753
No 65
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.52 E-value=0.0002 Score=63.99 Aligned_cols=74 Identities=23% Similarity=0.296 Sum_probs=48.8
Q ss_pred cEEEEeCCC-CC--------------HHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhC---CCcEE
Q 020420 54 PIKICGDIH-GQ--------------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFF 115 (326)
Q Consensus 54 ~i~ViGDIH-G~--------------~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~---p~~v~ 115 (326)
+++.++|+| |. +..|.++++.+.....+.+|+.||++|....+.+.+..+...-... .-.++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 578999999 32 1236666665544455678899999998876655444433332222 45699
Q ss_pred EeCCcccccccc
Q 020420 116 LLRGNHECASVN 127 (326)
Q Consensus 116 lLrGNHE~~~~~ 127 (326)
++.||||.....
T Consensus 81 ~~~GNHD~~~~~ 92 (223)
T cd00840 81 IIAGNHDSPSRL 92 (223)
T ss_pred EecCCCCCcccc
Confidence 999999976543
No 66
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.48 E-value=0.00027 Score=66.16 Aligned_cols=70 Identities=16% Similarity=0.067 Sum_probs=46.9
Q ss_pred CcEEEEeCCC-C-----------CHHHHHHHHHhCCC--CCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeC
Q 020420 53 APIKICGDIH-G-----------QYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 118 (326)
Q Consensus 53 ~~i~ViGDIH-G-----------~~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLr 118 (326)
.+++.++|+| . ....|.++++.+.- +..+-+|+.||++|.|. .+-+..+...-...+..++++.
T Consensus 15 ~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~~v~ 92 (275)
T PRK11148 15 VRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS--SEAYQHFAEGIAPLRKPCVWLP 92 (275)
T ss_pred EEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC--HHHHHHHHHHHhhcCCcEEEeC
Confidence 5799999999 1 24567777776532 23466888999999874 2333333333223456799999
Q ss_pred Cccccc
Q 020420 119 GNHECA 124 (326)
Q Consensus 119 GNHE~~ 124 (326)
||||..
T Consensus 93 GNHD~~ 98 (275)
T PRK11148 93 GNHDFQ 98 (275)
T ss_pred CCCCCh
Confidence 999973
No 67
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.47 E-value=0.00025 Score=66.44 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=44.6
Q ss_pred EEEEeCCCCCHHHHHHHHHhC---CCCCCCceeeecCccCCCCC-cHHHHH------HHH---HH---HhhCCCcEEEeC
Q 020420 55 IKICGDIHGQYSDLLRLFEYG---GLPPRSNYLFLGDYVDRGKQ-SLETIC------LLL---AY---KIKYPENFFLLR 118 (326)
Q Consensus 55 i~ViGDIHG~~~~L~~ll~~~---g~~~~~~~vfLGD~VDRG~~-s~evl~------ll~---~l---k~~~p~~v~lLr 118 (326)
|+|+||+||+++.+.+.++.. ...+.+-+|++||+-..+.. ..+.+. -+. .+ ....|-.++++.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 589999999999987754432 23456778899999754432 232221 111 11 223566689999
Q ss_pred Cccccc
Q 020420 119 GNHECA 124 (326)
Q Consensus 119 GNHE~~ 124 (326)
||||..
T Consensus 81 GNHE~~ 86 (262)
T cd00844 81 GNHEAS 86 (262)
T ss_pred CCCCCH
Confidence 999964
No 68
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.40 E-value=0.00036 Score=69.31 Aligned_cols=71 Identities=23% Similarity=0.305 Sum_probs=45.3
Q ss_pred CcEEEEeCCC-CC-H------HH----HHHHHHhCCCCCCCceeeecCccCCCCCcHHHH----HHHHHHHhhCCCcEEE
Q 020420 53 APIKICGDIH-GQ-Y------SD----LLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETI----CLLLAYKIKYPENFFL 116 (326)
Q Consensus 53 ~~i~ViGDIH-G~-~------~~----L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl----~ll~~lk~~~p~~v~l 116 (326)
++++.++|+| |. + .+ |..+.+.+.-...+.+|+.||++|++..+.+.. .++..|+ ..+-.+++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~-~~~~~v~~ 79 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQ-QTGCQLVV 79 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHH-hcCCcEEE
Confidence 5789999999 32 1 11 233444433345677889999999986554432 2233333 23456999
Q ss_pred eCCccccc
Q 020420 117 LRGNHECA 124 (326)
Q Consensus 117 LrGNHE~~ 124 (326)
+.||||..
T Consensus 80 I~GNHD~~ 87 (407)
T PRK10966 80 LAGNHDSV 87 (407)
T ss_pred EcCCCCCh
Confidence 99999975
No 69
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.36 E-value=0.00057 Score=62.57 Aligned_cols=69 Identities=17% Similarity=0.196 Sum_probs=43.1
Q ss_pred CcEEEEeCCC-CCHHH----------------HHHHHHhCCCCCCCceeeecCccCCCCCc---HHHHHHHHHHHhhCCC
Q 020420 53 APIKICGDIH-GQYSD----------------LLRLFEYGGLPPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKYPE 112 (326)
Q Consensus 53 ~~i~ViGDIH-G~~~~----------------L~~ll~~~g~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~p~ 112 (326)
.++.||+|+| |--.. |.++.+.......+.+|++||+++..... .++..++..+ ..
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~----~~ 90 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT----FR 90 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc----CC
Confidence 6799999999 54222 22333333333457899999999765542 2222333222 24
Q ss_pred cEEEeCCcccccc
Q 020420 113 NFFLLRGNHECAS 125 (326)
Q Consensus 113 ~v~lLrGNHE~~~ 125 (326)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 70
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.31 E-value=0.00042 Score=60.21 Aligned_cols=67 Identities=25% Similarity=0.336 Sum_probs=43.1
Q ss_pred EEEEeCCCCCHHHH---------------HHHHHhCC--CCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEe
Q 020420 55 IKICGDIHGQYSDL---------------LRLFEYGG--LPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 117 (326)
Q Consensus 55 i~ViGDIHG~~~~L---------------~~ll~~~g--~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lL 117 (326)
+++++|+|=..... .++++.+. ..+.+.++++||++++|..+.. +.++.. .+..++++
T Consensus 1 ~~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~~~~~-~~~l~~----~~~~~~~v 75 (168)
T cd07390 1 IYFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGKAGTE-LELLSR----LNGRKHLI 75 (168)
T ss_pred CeEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCChHHH-HHHHHh----CCCCeEEE
Confidence 36889998655432 22233221 2345789999999999986543 333333 34569999
Q ss_pred CCccccccc
Q 020420 118 RGNHECASV 126 (326)
Q Consensus 118 rGNHE~~~~ 126 (326)
+||||....
T Consensus 76 ~GNHD~~~~ 84 (168)
T cd07390 76 KGNHDSSLE 84 (168)
T ss_pred eCCCCchhh
Confidence 999997643
No 71
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.26 E-value=0.0008 Score=66.78 Aligned_cols=73 Identities=19% Similarity=0.213 Sum_probs=55.6
Q ss_pred CcEEEEeCCCCC------------HHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhh-----------
Q 020420 53 APIKICGDIHGQ------------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIK----------- 109 (326)
Q Consensus 53 ~~i~ViGDIHG~------------~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~----------- 109 (326)
+++++++|+|-- +..|.++++.+.-...+-+|+.||++|++.-|.+++..++.+-.+
T Consensus 4 mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p~~~~ 83 (405)
T TIGR00583 4 IRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKPCELE 83 (405)
T ss_pred eEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCccchh
Confidence 689999999942 557788888775555677888999999999998887665443222
Q ss_pred -------------------------CCCcEEEeCCcccccc
Q 020420 110 -------------------------YPENFFLLRGNHECAS 125 (326)
Q Consensus 110 -------------------------~p~~v~lLrGNHE~~~ 125 (326)
..-.|+++-||||...
T Consensus 84 ~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p~ 124 (405)
T TIGR00583 84 FLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDPS 124 (405)
T ss_pred hccchhhhcccccccccccccccccCCCCEEEEcCCCCCcc
Confidence 1336999999999864
No 72
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=97.22 E-value=0.0012 Score=61.03 Aligned_cols=73 Identities=22% Similarity=0.226 Sum_probs=51.8
Q ss_pred CcEEEEeCCCCC------HHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHH--hhCCCcEEEeCCccccc
Q 020420 53 APIKICGDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYK--IKYPENFFLLRGNHECA 124 (326)
Q Consensus 53 ~~i~ViGDIHG~------~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk--~~~p~~v~lLrGNHE~~ 124 (326)
++++.|+|+|-- ...+.++++.+.....+.+|+.||+.+.|. .+-...+..+- ...+..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~~~--~~~~~~~~~~l~~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTNDGE--PEEYRRLKELLARLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCCCC--HHHHHHHHHHHhhccCCCceEeeCCCCcCC
Confidence 468899999977 345666677777666688999999999963 22222332222 35678899999999987
Q ss_pred ccc
Q 020420 125 SVN 127 (326)
Q Consensus 125 ~~~ 127 (326)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 73
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=97.12 E-value=0.00076 Score=60.24 Aligned_cols=28 Identities=7% Similarity=0.026 Sum_probs=21.8
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccce
Q 020420 224 GADRVTEFLQKHDLELICRAHQVVEDGY 251 (326)
Q Consensus 224 g~~~~~~fl~~~~l~~iIRgH~~~~~G~ 251 (326)
.+..+.+.++..+.+.+|-||.-.+.-.
T Consensus 177 ~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 177 FEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 4456777788999999999999875443
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=97.08 E-value=0.0011 Score=60.53 Aligned_cols=43 Identities=5% Similarity=-0.035 Sum_probs=29.0
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceE---EecCCeEEEEecCCCC
Q 020420 224 GADRVTEFLQKHDLELICRAHQVVEDGYE---FFANRRLITIFSAPNY 268 (326)
Q Consensus 224 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~---~~~~~~~iTifSa~~Y 268 (326)
+...+.+.+++.++++++-||.-...-.. ...+| |+.+++|+=
T Consensus 181 ~~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~~~g--i~~~~~~~~ 226 (232)
T cd07393 181 DDSPISKLIEEYGVDICVYGHLHGVGRDRAINGERGG--IRYQLVSAD 226 (232)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcccccccceECC--EEEEEEcch
Confidence 45667888889999999999987643322 12344 566666643
No 75
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.00 E-value=0.0015 Score=60.67 Aligned_cols=28 Identities=18% Similarity=0.166 Sum_probs=23.0
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEEec
Q 020420 228 VTEFLQKHDLELICRAHQVVEDGYEFFA 255 (326)
Q Consensus 228 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~ 255 (326)
+.+.+++.++++++-||.-...+.+..+
T Consensus 190 ~~~ll~~~~v~~vl~GH~H~~~~~~p~h 217 (256)
T cd07401 190 FKDLLKKYNVTAYLCGHLHPLGGLEPVH 217 (256)
T ss_pred HHHHHHhcCCcEEEeCCccCCCcceeee
Confidence 7778899999999999999877745543
No 76
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.91 E-value=0.0022 Score=60.19 Aligned_cols=70 Identities=17% Similarity=0.163 Sum_probs=40.9
Q ss_pred CcEEEEeCCCC----CHHHHHHHHHhCCCCCCCceeeecCccCCCCCc----HH-HHHHHHHHHhhCCCcEEEeCCcccc
Q 020420 53 APIKICGDIHG----QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS----LE-TICLLLAYKIKYPENFFLLRGNHEC 123 (326)
Q Consensus 53 ~~i~ViGDIHG----~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s----~e-vl~ll~~lk~~~p~~v~lLrGNHE~ 123 (326)
-+++|+||.|. +...+.++.+. ....+-+|++||+++.+... -+ .+..+-.+. ..-.++.++||||.
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 80 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLA--SYVPYMVTPGNHEA 80 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHH--hcCCcEEcCccccc
Confidence 47899999995 33334444443 23345677899999644322 11 222222222 22349999999997
Q ss_pred ccc
Q 020420 124 ASV 126 (326)
Q Consensus 124 ~~~ 126 (326)
...
T Consensus 81 ~~~ 83 (294)
T cd00839 81 DYN 83 (294)
T ss_pred ccC
Confidence 643
No 77
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.68 E-value=0.0028 Score=58.27 Aligned_cols=68 Identities=18% Similarity=0.243 Sum_probs=38.0
Q ss_pred EEEeCCC--CCH---HHHHHHHHhC-CCC----CCCceeeecCccCCCCC------------cHH----HHHHHHHHHhh
Q 020420 56 KICGDIH--GQY---SDLLRLFEYG-GLP----PRSNYLFLGDYVDRGKQ------------SLE----TICLLLAYKIK 109 (326)
Q Consensus 56 ~ViGDIH--G~~---~~L~~ll~~~-g~~----~~~~~vfLGD~VDRG~~------------s~e----vl~ll~~lk~~ 109 (326)
++|+|+| +.. ..+..+++.+ +.. ..+.+|++||++|+... ..+ +..++-.|.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~-- 79 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVP-- 79 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcc--
Confidence 6899999 331 2223333322 221 23678889999997310 011 222222222
Q ss_pred CCCcEEEeCCcccccc
Q 020420 110 YPENFFLLRGNHECAS 125 (326)
Q Consensus 110 ~p~~v~lLrGNHE~~~ 125 (326)
..-.|+++.||||...
T Consensus 80 ~~~~v~~ipGNHD~~~ 95 (243)
T cd07386 80 SHIKIIIIPGNHDAVR 95 (243)
T ss_pred cCCeEEEeCCCCCccc
Confidence 3456999999999753
No 78
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=96.43 E-value=0.0058 Score=52.52 Aligned_cols=119 Identities=19% Similarity=0.286 Sum_probs=79.0
Q ss_pred EEEeCCCCCHHHHHHHHHhCCC--CCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCCh
Q 020420 56 KICGDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY 133 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~ 133 (326)
+|+||+||+++.+.+-++...- .+-+-++++||+..-...+-+ +.-++.=....|--.+++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~-~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDDEE-LEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccchhh-HHHHhcCCccCCCCEEEECCCCC-----------
Confidence 4899999999999877765321 234668889999976555433 33333445567888999999997
Q ss_pred HHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCCCCCcc
Q 020420 134 DECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSNDIKGWE 213 (326)
Q Consensus 134 ~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~~~~~~ 213 (326)
+-.||++|.=+. .+...+++. .+
T Consensus 69 ----------------------------~~DILlTh~wP~-gi~~~~~~~-------------------~~--------- 91 (150)
T cd07380 69 ----------------------------GVDILLTSEWPK-GISKLSKVP-------------------FE--------- 91 (150)
T ss_pred ----------------------------CCCEEECCCCch-hhhhhCCCc-------------------cc---------
Confidence 447888886442 111111110 00
Q ss_pred cCCCCceeecChHHHHHHHHhCCCceEEEeeeee
Q 020420 214 ANDRGVSYVFGADRVTEFLQKHDLELICRAHQVV 247 (326)
Q Consensus 214 ~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~ 247 (326)
..+..-|...+++++++..=++.+-||..+
T Consensus 92 ----~~~~~~GS~~i~~l~~~lkPrYhf~gh~~~ 121 (150)
T cd07380 92 ----ETLLICGSDLIAELAKKLKPRYHFAGLEGV 121 (150)
T ss_pred ----ccccCCCCHHHHHHHHHcCCCeEeecCCCc
Confidence 012234778899999999999999999653
No 79
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.41 E-value=0.0063 Score=57.65 Aligned_cols=71 Identities=24% Similarity=0.237 Sum_probs=47.2
Q ss_pred cEEEEeCCCCCHHH--HHHHHHhCCCCCCCceeeecCccCC-CCCcH-HHHHHHHHHHhhCCCcEEEeCCccccccc
Q 020420 54 PIKICGDIHGQYSD--LLRLFEYGGLPPRSNYLFLGDYVDR-GKQSL-ETICLLLAYKIKYPENFFLLRGNHECASV 126 (326)
Q Consensus 54 ~i~ViGDIHG~~~~--L~~ll~~~g~~~~~~~vfLGD~VDR-G~~s~-evl~ll~~lk~~~p~~v~lLrGNHE~~~~ 126 (326)
+++-++|+|-.... ..+.+........+-+++.|||+|+ .+.+. .+...|..|+ .|-.++.+.||||...-
T Consensus 46 ~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~~~~~~~~~~~L~~L~--~~~gv~av~GNHd~~~~ 120 (284)
T COG1408 46 KIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDRPPGVAALALFLAKLK--APLGVFAVLGNHDYGVD 120 (284)
T ss_pred EEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCCCCCHHHHHHHHHhhh--ccCCEEEEecccccccc
Confidence 58999999987554 2233333322333778889999996 55444 4445555554 66679999999987644
No 80
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=96.41 E-value=0.0067 Score=53.06 Aligned_cols=47 Identities=26% Similarity=0.316 Sum_probs=29.9
Q ss_pred CCCceeeecCccCCCCCcH--HHHHHHHHHHhh----C----CCcEEEeCCcccccc
Q 020420 79 PRSNYLFLGDYVDRGKQSL--ETICLLLAYKIK----Y----PENFFLLRGNHECAS 125 (326)
Q Consensus 79 ~~~~~vfLGD~VDRG~~s~--evl~ll~~lk~~----~----p~~v~lLrGNHE~~~ 125 (326)
..+.+|++||++|.+.... +....+..++.. . +-.++++.||||...
T Consensus 45 ~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred CCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4567899999999987542 222222222211 1 456999999999864
No 81
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.24 E-value=0.0087 Score=53.63 Aligned_cols=46 Identities=20% Similarity=0.367 Sum_probs=32.8
Q ss_pred CCCceeeecCccCCCCCc--HHHHHHHHHHHhhCC----CcEEEeCCccccc
Q 020420 79 PRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYP----ENFFLLRGNHECA 124 (326)
Q Consensus 79 ~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p----~~v~lLrGNHE~~ 124 (326)
..+-+|||||++|.|+.+ .|....+..++-.++ ..++.+.||||.-
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred CCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 456788999999999964 335555555543322 4688999999965
No 82
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=96.09 E-value=0.024 Score=51.91 Aligned_cols=185 Identities=14% Similarity=0.133 Sum_probs=82.0
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHH--------------------------HHHHHH
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETI--------------------------CLLLAY 106 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl--------------------------~ll~~l 106 (326)
.+++.++|.||+++.|.++...+.-.+.+-++|+||++-....+.|-. .++..|
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~L 85 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRIL 85 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHHH
Confidence 468999999999999999988765455678999999986554443332 222233
Q ss_pred HhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecC-----CCCCCCCChhh
Q 020420 107 KIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHG-----GLSPDLHNLNQ 181 (326)
Q Consensus 107 k~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHg-----Gi~p~~~~l~~ 181 (326)
-..+-.+++++||||....-. . ++..+.=---|....+.+.++.--| |..-.+..-..
T Consensus 86 -~~~~~p~~~vPG~~Dap~~~~----l------------r~a~~~e~v~p~~~~vH~sf~~~~g~y~v~G~GGeI~~~~~ 148 (255)
T PF14582_consen 86 -GELGVPVFVVPGNMDAPERFF----L------------REAYNAEIVTPHIHNVHESFFFWKGEYLVAGMGGEITDDQR 148 (255)
T ss_dssp -HCC-SEEEEE--TTS-SHHHH----H------------HHHHHCCCC-TTEEE-CTCEEEETTTEEEEEE-SEEESSS-
T ss_pred -HhcCCcEEEecCCCCchHHHH----H------------HHHhccceeccceeeeeeeecccCCcEEEEecCccccCCCc
Confidence 245567999999999853210 1 1110000012333333333222221 11111111111
Q ss_pred hccCCCCCCCCCc--hhHHHHhhcC-CCCCCCCcccCC-CCce-eecChHHHHHHHHhCCCceEEEeeeeeccceEEecC
Q 020420 182 IRSLPRPTDVPES--GLLCDLLWSD-PSNDIKGWEAND-RGVS-YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFAN 256 (326)
Q Consensus 182 i~~i~rp~~~~~~--~~~~dlLWsD-P~~~~~~~~~n~-rg~g-~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~ 256 (326)
.. ..++..|.+ .....++|-= +...+--+...+ -+.+ ..-|..++.+|.++.+=...+.||-....|-+.-.+
T Consensus 149 ~~--~~~LrYP~weaey~lk~l~elk~~r~IlLfhtpPd~~kg~~h~GS~~V~dlIk~~~P~ivl~Ghihe~~~~e~lG~ 226 (255)
T PF14582_consen 149 EE--EFKLRYPAWEAEYSLKFLRELKDYRKILLFHTPPDLHKGLIHVGSAAVRDLIKTYNPDIVLCGHIHESHGKESLGK 226 (255)
T ss_dssp BC--SSS-EEEHHHHHHHHGGGGGCTSSEEEEEESS-BTBCTCTBTTSBHHHHHHHHHH--SEEEE-SSS-EE--EEETT
T ss_pred cc--cccccchHHHHHHHHHHHHhcccccEEEEEecCCccCCCcccccHHHHHHHHHhcCCcEEEecccccchhhHHhCC
Confidence 10 111222221 1222334431 111111111111 2223 346889999999999999999999876666555443
No 83
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=96.04 E-value=0.082 Score=49.33 Aligned_cols=24 Identities=4% Similarity=-0.020 Sum_probs=21.1
Q ss_pred cChHHHHHHHHhCCCceEEEeeee
Q 020420 223 FGADRVTEFLQKHDLELICRAHQV 246 (326)
Q Consensus 223 fg~~~~~~fl~~~~l~~iIRgH~~ 246 (326)
-.+++.++.|++.+-.+|.-||+.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH 226 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH 226 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC
Confidence 477889999999999999999975
No 84
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=95.95 E-value=0.011 Score=54.21 Aligned_cols=66 Identities=27% Similarity=0.308 Sum_probs=41.8
Q ss_pred cEEEEeCCCCCH---------HHHHHHHHhCCCC-CCCceeeecCccCCCCCcH-----HHHHHHHHHHhhCCCcEEEeC
Q 020420 54 PIKICGDIHGQY---------SDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQSL-----ETICLLLAYKIKYPENFFLLR 118 (326)
Q Consensus 54 ~i~ViGDIHG~~---------~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~-----evl~ll~~lk~~~p~~v~lLr 118 (326)
+++.++|+||.+ ..+.++++...-. +..-++..||+++.++.+- .++..+..+ +-.+ +..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~----g~d~-~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNAL----GYDA-VTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhc----CCCE-Eee
Confidence 578999999886 5566666664433 2334567899999887643 344444333 2233 445
Q ss_pred Cccccc
Q 020420 119 GNHECA 124 (326)
Q Consensus 119 GNHE~~ 124 (326)
||||..
T Consensus 77 GNHe~d 82 (252)
T cd00845 77 GNHEFD 82 (252)
T ss_pred cccccc
Confidence 999963
No 85
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=95.90 E-value=0.023 Score=55.92 Aligned_cols=73 Identities=22% Similarity=0.207 Sum_probs=50.5
Q ss_pred CcEEEEeCCCCC-------------HHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhC---CCcEEE
Q 020420 53 APIKICGDIHGQ-------------YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKY---PENFFL 116 (326)
Q Consensus 53 ~~i~ViGDIHG~-------------~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~---p~~v~l 116 (326)
++++.++|.|=- +.+|..+++.+.-...+-+|.-||+.|++.-|.+++..+...-.+. .-.|++
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~~ 80 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVVV 80 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEEE
Confidence 578888999844 3344455555433344667789999999998888877665443322 236999
Q ss_pred eCCcccccc
Q 020420 117 LRGNHECAS 125 (326)
Q Consensus 117 LrGNHE~~~ 125 (326)
|.||||...
T Consensus 81 I~GNHD~~~ 89 (390)
T COG0420 81 IAGNHDSPS 89 (390)
T ss_pred ecCCCCchh
Confidence 999999764
No 86
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.79 E-value=0.034 Score=51.10 Aligned_cols=198 Identities=16% Similarity=0.207 Sum_probs=102.3
Q ss_pred EEEeCCCCC------HHHHHHHHHhCCCCCCCceeeecCccCC--CCC-----cHHHHHHHHHHHhhCCCcEEEeCCccc
Q 020420 56 KICGDIHGQ------YSDLLRLFEYGGLPPRSNYLFLGDYVDR--GKQ-----SLETICLLLAYKIKYPENFFLLRGNHE 122 (326)
Q Consensus 56 ~ViGDIHG~------~~~L~~ll~~~g~~~~~~~vfLGD~VDR--G~~-----s~evl~ll~~lk~~~p~~v~lLrGNHE 122 (326)
+.|+|+|=. -+.|.+.|+... +..+.+.++||++|- |.+ --+|...|..+ ...+.+++.+.||||
T Consensus 1 lFISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 1 LFISDLHLGPKRPALTAFFLDFLREEA-AQADALYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred CeeeccccCCCCcHHHHHHHHHHHhcc-ccCcEEEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 368999954 334566666543 344667889999972 332 13444444433 346789999999999
Q ss_pred ccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEE---cCcEEEecCCCCCCC-CChhhhc-----------cCCC
Q 020420 123 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALI---DEKILCMHGGLSPDL-HNLNQIR-----------SLPR 187 (326)
Q Consensus 123 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i---~~~il~vHgGi~p~~-~~l~~i~-----------~i~r 187 (326)
...-+ .+ ..-..-+.-+|-...+ +.+++.+||-.--.. ..-...+ -+..
T Consensus 79 fll~~-~f---------------~~~~g~~~l~~~~~~~~l~g~~~Ll~HGD~f~t~~~~y~~~r~~~~~~~~~~lflnl 142 (237)
T COG2908 79 FLLGK-RF---------------AQEAGGMTLLPDPIVLDLYGKRILLAHGDTFCTDDRAYQWFRYKVHWAWLQLLFLNL 142 (237)
T ss_pred HHHHH-HH---------------HhhcCceEEcCcceeeeecCcEEEEEeCCcccchHHHHHHHHHHcccHHHHHHHHHh
Confidence 43211 11 0001112334444333 458999999653211 0000011 0111
Q ss_pred CCCCCCchhHHHHhhcCCCCCCCCcccCCCCce---eecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEec
Q 020420 188 PTDVPESGLLCDLLWSDPSNDIKGWEANDRGVS---YVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFS 264 (326)
Q Consensus 188 p~~~~~~~~~~dlLWsDP~~~~~~~~~n~rg~g---~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifS 264 (326)
|+. -..-+..-+|+.-+ |........ .-..+.++.+-+++++++.+|.||.-.+.......-.+|.
T Consensus 143 ~l~--~R~ri~~k~r~~s~-----~~k~~~~~~~~i~d~~~~~v~~~~~~~~vd~vI~GH~Hr~ai~~i~~~~yi~---- 211 (237)
T COG2908 143 PLR--VRRRIAYKIRSLSS-----WAKKKVKKAVNIMDVNPAAVADEARRHGVDGVIHGHTHRPAIHNIPGITYIN---- 211 (237)
T ss_pred HHH--HHHHHHHHHHHhhH-----HhHHhhhhHHHHHHhhHHHHHHHHHHcCCCEEEecCcccHhhccCCCceEEe----
Confidence 111 00111222444431 111111111 1346677888899999999999999887665443211111
Q ss_pred CCCCCCCCCCeEEEEEEcCCcc
Q 020420 265 APNYCGEFDNAGAMMSVDETLM 286 (326)
Q Consensus 265 a~~Y~~~~~n~ga~l~i~~~~~ 286 (326)
+|.-...|++++++.+..
T Consensus 212 ----lGdW~~~~s~~~v~~~~~ 229 (237)
T COG2908 212 ----LGDWVSEGSILEVDDGGL 229 (237)
T ss_pred ----cCcchhcceEEEEecCcE
Confidence 111225678898887764
No 87
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.40 E-value=0.033 Score=49.82 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=41.5
Q ss_pred CCCCCHHHHHHHHHhCCC-CCCCceeeecCccCCCCCcHHH-HHHHHHHHhhC---------------------CCcEEE
Q 020420 60 DIHGQYSDLLRLFEYGGL-PPRSNYLFLGDYVDRGKQSLET-ICLLLAYKIKY---------------------PENFFL 116 (326)
Q Consensus 60 DIHG~~~~L~~ll~~~g~-~~~~~~vfLGD~VDRG~~s~ev-l~ll~~lk~~~---------------------p~~v~l 116 (326)
|++|+=.-|.++++.+-+ -..+.++||||++|.|--+-+- .......+-.+ .-.+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 667777777777776543 3456788999999987533322 23333332222 135789
Q ss_pred eCCccccc
Q 020420 117 LRGNHECA 124 (326)
Q Consensus 117 LrGNHE~~ 124 (326)
|.||||.-
T Consensus 104 V~GNHDIG 111 (193)
T cd08164 104 IAGNHDVG 111 (193)
T ss_pred ECCcccCC
Confidence 99999974
No 88
>PLN02533 probable purple acid phosphatase
Probab=95.37 E-value=0.02 Score=57.27 Aligned_cols=71 Identities=14% Similarity=0.099 Sum_probs=39.8
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcH--H-HHHHHHHHHhhCCCcEEEeCCcccccc
Q 020420 52 EAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSL--E-TICLLLAYKIKYPENFFLLRGNHECAS 125 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~--e-vl~ll~~lk~~~p~~v~lLrGNHE~~~ 125 (326)
.-+++++||+|-. ......++.+.....+-++++||+++-+.+.- + ...++-.+.... .++.+.||||...
T Consensus 139 ~~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~--P~m~~~GNHE~~~ 212 (427)
T PLN02533 139 PIKFAVSGDLGTS-EWTKSTLEHVSKWDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQR--PWMVTHGNHELEK 212 (427)
T ss_pred CeEEEEEEeCCCC-cccHHHHHHHHhcCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcC--ceEEeCccccccc
Confidence 3469999999632 11123333332234456778999998654321 1 112222222223 4899999999764
No 89
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=95.17 E-value=0.1 Score=45.08 Aligned_cols=70 Identities=16% Similarity=0.130 Sum_probs=41.8
Q ss_pred cEEEEeCCCCC------------HHHHHHHH-HhC--CCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeC
Q 020420 54 PIKICGDIHGQ------------YSDLLRLF-EYG--GLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 118 (326)
Q Consensus 54 ~i~ViGDIHG~------------~~~L~~ll-~~~--g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLr 118 (326)
-++.+||.|=. .+....++ ... -..|++.+.+|||+.-.-.+..+....+- +-++++++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~~a~~Ile----rLnGrkhlv~ 80 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRERAAGLILE----RLNGRKHLVP 80 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhhHHHHHHH----HcCCcEEEee
Confidence 37788898843 33332221 111 12456778899999865444333333332 2478899999
Q ss_pred Ccccccccc
Q 020420 119 GNHECASVN 127 (326)
Q Consensus 119 GNHE~~~~~ 127 (326)
||||.-...
T Consensus 81 GNhDk~~~~ 89 (186)
T COG4186 81 GNHDKCHPM 89 (186)
T ss_pred CCCCCCccc
Confidence 999975433
No 90
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=94.94 E-value=0.32 Score=48.98 Aligned_cols=208 Identities=18% Similarity=0.209 Sum_probs=104.7
Q ss_pred cEEEEeCCCC-CHH----HHHHHHHhCCCC----CCCcee-eecCccCCC------------CCcHHHHHHHHHHHhhCC
Q 020420 54 PIKICGDIHG-QYS----DLLRLFEYGGLP----PRSNYL-FLGDYVDRG------------KQSLETICLLLAYKIKYP 111 (326)
Q Consensus 54 ~i~ViGDIHG-~~~----~L~~ll~~~g~~----~~~~~v-fLGD~VDRG------------~~s~evl~ll~~lk~~~p 111 (326)
.+++++|+|= ... .+.+.++.++-+ +..+|+ .-||.||.. .+..|-+..+-.+--.-|
T Consensus 227 ~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~vp 306 (481)
T COG1311 227 YVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQVP 306 (481)
T ss_pred EEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhhCC
Confidence 3789999995 322 223333332222 233555 579999942 111222333333322344
Q ss_pred C--cEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCCCCChhhhccCCCC
Q 020420 112 E--NFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPDLHNLNQIRSLPRP 188 (326)
Q Consensus 112 ~--~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~~~~l~~i~~i~rp 188 (326)
+ .|++.+||||........-...+.. ..++...+-.|=.=|...-+++ .++..|| .+++||...-..
T Consensus 307 ~~I~v~i~PGnhDa~r~a~PQp~~~~~~----kslf~~~n~~~v~NP~~~~l~G~~vL~~hG------~sidDii~~vP~ 376 (481)
T COG1311 307 EHIKVFIMPGNHDAVRQALPQPHFPELI----KSLFSLNNLLFVSNPALVSLHGVDVLIYHG------RSIDDIIKLVPG 376 (481)
T ss_pred CCceEEEecCCCCccccccCCCCcchhh----cccccccceEecCCCcEEEECCEEEEEecC------CCHHHHHhhCCC
Confidence 4 5888999999765543222222221 1222222222333355555555 5778886 356776544332
Q ss_pred CCC--CCchhHHHHhhcCCCCCCCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCC
Q 020420 189 TDV--PESGLLCDLLWSDPSNDIKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAP 266 (326)
Q Consensus 189 ~~~--~~~~~~~dlLWsDP~~~~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~ 266 (326)
.+. +..-+.+-+.|.-=.+...+..+ -+-| .-+.|.=.---+.++.||+.. .|+....+.+++..+|.+
T Consensus 377 ~~~~~~~~ame~lLk~rHlaPtygg~~p-----~aP~---~kD~lVIeevPDv~~~Ghvh~-~g~~~y~gv~~vns~T~q 447 (481)
T COG1311 377 ADYDSPLKAMEELLKRRHLAPTYGGTLP-----IAPE---TKDYLVIEEVPDVFHTGHVHK-FGTGVYEGVNLVNSGTWQ 447 (481)
T ss_pred CCccchHHHHHHHHHhcccCCCCCCccc-----cccC---CcCceeeccCCcEEEEccccc-cceeEEeccceEEeeeec
Confidence 222 11223334455432221111100 0111 111122222367889999998 799888888899888888
Q ss_pred CCCCCCCCeEEEEEEcCC
Q 020420 267 NYCGEFDNAGAMMSVDET 284 (326)
Q Consensus 267 ~Y~~~~~n~ga~l~i~~~ 284 (326)
.+.. .+-++.|+..
T Consensus 448 ~qTe----fqk~vni~p~ 461 (481)
T COG1311 448 EQTE----FQKMVNINPT 461 (481)
T ss_pred chhc----cceEEEecCc
Confidence 6543 4556666554
No 91
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.89 E-value=0.28 Score=42.03 Aligned_cols=115 Identities=23% Similarity=0.392 Sum_probs=79.4
Q ss_pred EEEEeCCCC--CHHHHHHHHHhCCCCCC-CceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccC
Q 020420 55 IKICGDIHG--QYSDLLRLFEYGGLPPR-SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYG 131 (326)
Q Consensus 55 i~ViGDIHG--~~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~g 131 (326)
+.++||+|= ...+|-.-|+++-.|.. ++++++|++. |.|++++|..+. ..++++||--|...
T Consensus 3 vL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~~~------ 67 (183)
T KOG3325|consen 3 VLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDENL------ 67 (183)
T ss_pred EEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCccc------
Confidence 678999994 34455555666556665 5688999976 889999997774 68999999776541
Q ss_pred ChHHHHHHhchhHHHHHHHHhccCCcEEEE--cC-cEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCC
Q 020420 132 FYDECKRRFNVRLWKIFTDCFNCLPVAALI--DE-KILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSND 208 (326)
Q Consensus 132 f~~e~~~~~~~~~~~~~~~~f~~LPlaa~i--~~-~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~ 208 (326)
.-|-.-++ +. ++-|+||-.- +=|.||.
T Consensus 68 ----------------------~yP~~kvvtvGqfkIG~chGhqV--------------------------iP~gd~~-- 97 (183)
T KOG3325|consen 68 ----------------------KYPENKVVTVGQFKIGLCHGHQV--------------------------IPWGDPE-- 97 (183)
T ss_pred ----------------------cCCccceEEeccEEEEeecCcEe--------------------------ecCCCHH--
Confidence 12322222 22 6889998532 2255553
Q ss_pred CCCcccCCCCceeecChHHHHHHHHhCCCceEEEeeeeeccceE
Q 020420 209 IKGWEANDRGVSYVFGADRVTEFLQKHDLELICRAHQVVEDGYE 252 (326)
Q Consensus 209 ~~~~~~n~rg~g~~fg~~~~~~fl~~~~l~~iIRgH~~~~~G~~ 252 (326)
++.-.-++.+++.++-||+..-+.|+
T Consensus 98 ------------------sL~~LaRqldvDILl~G~Th~f~Aye 123 (183)
T KOG3325|consen 98 ------------------SLALLARQLDVDILLTGHTHKFEAYE 123 (183)
T ss_pred ------------------HHHHHHHhcCCcEEEeCCceeEEEEE
Confidence 46666778899999999998877776
No 92
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=94.86 E-value=0.037 Score=51.75 Aligned_cols=66 Identities=21% Similarity=0.203 Sum_probs=38.0
Q ss_pred cEEEEeCCCCCH----------------HHHHHHHHhCCCCCCCceee-ecCccCCCCCc-----------HHHHHHHHH
Q 020420 54 PIKICGDIHGQY----------------SDLLRLFEYGGLPPRSNYLF-LGDYVDRGKQS-----------LETICLLLA 105 (326)
Q Consensus 54 ~i~ViGDIHG~~----------------~~L~~ll~~~g~~~~~~~vf-LGD~VDRG~~s-----------~evl~ll~~ 105 (326)
+|+.++|+||.+ ..+..+++...-...+.+++ .||+++..+.+ ..++..+..
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 478899999996 33555555543222233333 69999876522 224444444
Q ss_pred HHhhCCCcEEEeCCccccc
Q 020420 106 YKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 106 lk~~~p~~v~lLrGNHE~~ 124 (326)
+. . -++..||||..
T Consensus 82 ~g---~--d~~~lGNHe~d 95 (277)
T cd07410 82 LG---Y--DAGTLGNHEFN 95 (277)
T ss_pred cC---C--CEEeecccCcc
Confidence 32 2 24455999953
No 93
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.57 E-value=0.13 Score=47.34 Aligned_cols=101 Identities=20% Similarity=0.234 Sum_probs=59.7
Q ss_pred cCcEEEEeCCCCCHHHHH----------------HHHH-hCCCCCCCceeeecCccCCCCCc-----HHHHHHHHHHHhh
Q 020420 52 EAPIKICGDIHGQYSDLL----------------RLFE-YGGLPPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIK 109 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~~L~----------------~ll~-~~g~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~ 109 (326)
..+..||+|+|=-+.... +.++ ....-..+++|.+||+-.-.+.+ .|+-.++-.++ .
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~-~ 97 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLD-E 97 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccccccHHHHHHHHHHhc-c
Confidence 578999999996544332 2222 11122356899999999654432 34433333333 2
Q ss_pred CCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCC
Q 020420 110 YPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPD 175 (326)
Q Consensus 110 ~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~ 175 (326)
. .+++++||||...-....++.- ..++.. . .++++++||=-.+.
T Consensus 98 ~--evi~i~GNHD~~i~~~~~~~~v------------------~v~~~~-~-i~~~~~~HGh~~~~ 141 (235)
T COG1407 98 R--EVIIIRGNHDNGIEEILPGFNV------------------EVVDEL-E-IGGLLFRHGHKEPE 141 (235)
T ss_pred C--cEEEEeccCCCccccccccCCc------------------eeeeeE-E-ecCEEEEeCCCCCc
Confidence 2 4999999999875544444311 123333 2 35899999876554
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=94.27 E-value=0.096 Score=48.59 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=39.4
Q ss_pred cEEEEeCCCCC--H--HHHHHHHHh-CCCCCCCceeeecCcc-CCCCCcH------HHHHHHHHHHhhCCCcEEEeCCcc
Q 020420 54 PIKICGDIHGQ--Y--SDLLRLFEY-GGLPPRSNYLFLGDYV-DRGKQSL------ETICLLLAYKIKYPENFFLLRGNH 121 (326)
Q Consensus 54 ~i~ViGDIHG~--~--~~L~~ll~~-~g~~~~~~~vfLGD~V-DRG~~s~------evl~ll~~lk~~~p~~v~lLrGNH 121 (326)
+++++||.-.. . .++.+.+.. +.....+-+|++||++ +-|..+. +.+..++.. ....-.++.+.|||
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~-~~~~~P~~~v~GNH 80 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSA-PSLQVPWYLVLGNH 80 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccc-hhhcCCeEEecCCc
Confidence 57899998764 1 234333332 2223446688999997 5553221 222222221 11234599999999
Q ss_pred ccc
Q 020420 122 ECA 124 (326)
Q Consensus 122 E~~ 124 (326)
|..
T Consensus 81 D~~ 83 (277)
T cd07378 81 DYS 83 (277)
T ss_pred ccC
Confidence 976
No 95
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.53 E-value=0.1 Score=48.43 Aligned_cols=66 Identities=23% Similarity=0.154 Sum_probs=39.1
Q ss_pred cEEEEeCCCCCH----------HHHHHHHHhCCCCCCCceeeecCccCCCCCc-----HHHHHHHHHHHhhCCCcEEEeC
Q 020420 54 PIKICGDIHGQY----------SDLLRLFEYGGLPPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLR 118 (326)
Q Consensus 54 ~i~ViGDIHG~~----------~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~lLr 118 (326)
+++-++|+||++ ..+..+++...-.+..-++..||+++..+.+ ..++..+-.+ +-.+ +..
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~----g~d~-~~~ 76 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPISDLDKGETIIKIMNAV----GYDA-VTP 76 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhc----CCcE-Ecc
Confidence 477899999984 4455666654332344455689999876543 2223333222 2234 456
Q ss_pred Cccccc
Q 020420 119 GNHECA 124 (326)
Q Consensus 119 GNHE~~ 124 (326)
||||..
T Consensus 77 GNHefd 82 (257)
T cd07408 77 GNHEFD 82 (257)
T ss_pred cccccc
Confidence 999953
No 96
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=92.80 E-value=0.12 Score=48.75 Aligned_cols=66 Identities=27% Similarity=0.293 Sum_probs=40.7
Q ss_pred cEEEEeCCCCCHHH--------------HHHHHHhCCCC-CCCceeeecCccCCCCC-c-----HHHHHHHHHHHhhCCC
Q 020420 54 PIKICGDIHGQYSD--------------LLRLFEYGGLP-PRSNYLFLGDYVDRGKQ-S-----LETICLLLAYKIKYPE 112 (326)
Q Consensus 54 ~i~ViGDIHG~~~~--------------L~~ll~~~g~~-~~~~~vfLGD~VDRG~~-s-----~evl~ll~~lk~~~p~ 112 (326)
+++.+.|+||++.. +..+++..... +..-++..||+++..+. + ..++..+.++. -
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g----~ 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMG----V 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhC----C
Confidence 47889999998543 55666654332 23345568999987664 2 23455554443 2
Q ss_pred cEEEeCCccccc
Q 020420 113 NFFLLRGNHECA 124 (326)
Q Consensus 113 ~v~lLrGNHE~~ 124 (326)
.+ +..||||.-
T Consensus 78 Da-~t~GNHefd 88 (288)
T cd07412 78 DA-SAVGNHEFD 88 (288)
T ss_pred ee-eeecccccc
Confidence 23 455999964
No 97
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=91.38 E-value=0.52 Score=37.36 Aligned_cols=43 Identities=19% Similarity=0.307 Sum_probs=30.7
Q ss_pred ChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCCeeee
Q 020420 2 DPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPNLLEI 51 (326)
Q Consensus 2 ~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ll~l 51 (326)
+.+.++.+++.+-.. -.|+...+..|+.++.++|+++|++++|
T Consensus 53 t~efv~~mie~FK~~-------K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 53 TLEFVKAMIEWFKNQ-------KKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp -HHHHHHHHHHHHCT-----------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CHHHHHHHHHHHHhC-------CCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 456677777776433 2678999999999999999999999986
No 98
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=91.16 E-value=0.15 Score=52.69 Aligned_cols=65 Identities=25% Similarity=0.302 Sum_probs=45.7
Q ss_pred ChHHHHHHHHhCCCc----eEEEeeeeec--cceEE-ecCCeEEEE---ecCCCCCCCCCCeEEEEEEcCCcceEEE
Q 020420 224 GADRVTEFLQKHDLE----LICRAHQVVE--DGYEF-FANRRLITI---FSAPNYCGEFDNAGAMMSVDETLMCSFQ 290 (326)
Q Consensus 224 g~~~~~~fl~~~~l~----~iIRgH~~~~--~G~~~-~~~~~~iTi---fSa~~Y~~~~~n~ga~l~i~~~~~~~~~ 290 (326)
.++..+..|+..|++ .||-||.||. +|=.. -++||++.| ||.+ |...++=+|--| |.+.......
T Consensus 507 ~e~~c~~IL~EFgl~~~~~hIINGHvPVk~k~GEsPIKa~Gkl~VIDGGfskA-Yqk~TGIAGYTL-iyNS~gl~L~ 581 (640)
T PF06874_consen 507 DEEICDKILEEFGLDPERGHIINGHVPVKVKKGESPIKANGKLIVIDGGFSKA-YQKTTGIAGYTL-IYNSYGLQLV 581 (640)
T ss_pred CHHHHHHHHHHhCCCCCCCeEECCccccccCCCCCCccCCCEEEEEcChhhhh-hccccCccceEE-EecCCcceec
Confidence 456677889999999 9999999987 66543 478999999 7766 776655556544 4343333333
No 99
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=90.38 E-value=0.4 Score=44.60 Aligned_cols=65 Identities=20% Similarity=0.187 Sum_probs=35.9
Q ss_pred cEEEEeCCCCCHHH----------------------HHHHHHhCCCC-CCCce-eeecCccCCCCCcH-----HHHHHHH
Q 020420 54 PIKICGDIHGQYSD----------------------LLRLFEYGGLP-PRSNY-LFLGDYVDRGKQSL-----ETICLLL 104 (326)
Q Consensus 54 ~i~ViGDIHG~~~~----------------------L~~ll~~~g~~-~~~~~-vfLGD~VDRG~~s~-----evl~ll~ 104 (326)
.++.++|+||++.. +..+++...-. ..+.+ +..||+++..+.+. .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 36778899997533 34445543222 23333 45899998876432 3333333
Q ss_pred HHHhhCCCcEEEeCCccccc
Q 020420 105 AYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 105 ~lk~~~p~~v~lLrGNHE~~ 124 (326)
.+ +-.+. . ||||..
T Consensus 82 ~~----g~da~-~-GNHefd 95 (264)
T cd07411 82 AL----GVDAM-V-GHWEFT 95 (264)
T ss_pred hh----CCeEE-e-cccccc
Confidence 32 22333 3 999964
No 100
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=90.07 E-value=0.57 Score=41.54 Aligned_cols=73 Identities=19% Similarity=0.291 Sum_probs=41.0
Q ss_pred CCCceeeecCcc--CCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHhchhHHHHHHHHhccCC
Q 020420 79 PRSNYLFLGDYV--DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLP 156 (326)
Q Consensus 79 ~~~~~vfLGD~V--DRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LP 156 (326)
+++.++.-||+- =|=++..+-+.++=+ -|+.=+++|||||.+.-. ...+...+... .-..++.|+.+-
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~~Dl~~i~~----LPG~K~m~rGNHDYWw~s-----~skl~n~lp~~-l~~~n~~f~l~n 112 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAEEDLRFIGD----LPGTKYMIRGNHDYWWSS-----ISKLNNALPPI-LFYLNNGFELLN 112 (230)
T ss_pred hhhEEEecccchhheechhhhhhhhhhhc----CCCcEEEEecCCccccch-----HHHHHhhcCch-HhhhccceeEee
Confidence 344455569975 233444444444433 588999999999987542 12222233222 344566676666
Q ss_pred cEEEEc
Q 020420 157 VAALID 162 (326)
Q Consensus 157 laa~i~ 162 (326)
+| +++
T Consensus 113 ~a-I~G 117 (230)
T COG1768 113 YA-IVG 117 (230)
T ss_pred EE-EEE
Confidence 43 444
No 101
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=90.02 E-value=0.6 Score=46.36 Aligned_cols=56 Identities=25% Similarity=0.368 Sum_probs=36.2
Q ss_pred HHHHHHhCCCC-CCCceeeecCccCCCCCc--HHHHHHHHHHHhhCCC----cEEEeCCcccc
Q 020420 68 LLRLFEYGGLP-PRSNYLFLGDYVDRGKQS--LETICLLLAYKIKYPE----NFFLLRGNHEC 123 (326)
Q Consensus 68 L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s--~evl~ll~~lk~~~p~----~v~lLrGNHE~ 123 (326)
|.+.+...-+. ..+-++||||++|-|... -|--.....++..++. .+..+.||||-
T Consensus 81 lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 81 LRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIFGRKGNIKVIYIAGNHDI 143 (410)
T ss_pred HHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhhCCCCCCeeEEeCCcccc
Confidence 33444443333 345677899999988754 3444455556655554 78899999995
No 102
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=89.45 E-value=0.7 Score=43.44 Aligned_cols=72 Identities=24% Similarity=0.242 Sum_probs=41.3
Q ss_pred EEEEeCCCCC---HHHHHHHHHhCCC--CCCCceeeecCccCCCCCcH--H------HHHHHHHHHhhCC-CcEEEeCCc
Q 020420 55 IKICGDIHGQ---YSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSL--E------TICLLLAYKIKYP-ENFFLLRGN 120 (326)
Q Consensus 55 i~ViGDIHG~---~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~--e------vl~ll~~lk~~~p-~~v~lLrGN 120 (326)
.--.|+-. | ...+.++++.+.- ++.+-+|+.||+++.+.... + .-.+...++..+| -.|+.+.||
T Consensus 40 ~~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 40 AGPWGDYG-CDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 33455554 3 3445555554322 35566889999998876431 1 1112222333333 369999999
Q ss_pred ccccccc
Q 020420 121 HECASVN 127 (326)
Q Consensus 121 HE~~~~~ 127 (326)
||....+
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9986543
No 103
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=89.27 E-value=9.1 Score=35.82 Aligned_cols=48 Identities=17% Similarity=0.306 Sum_probs=29.8
Q ss_pred CceEEEeeeeeccceEEec--CCeEEEEecCCCCCCCCCCeEEEEEEc-CCcceEE
Q 020420 237 LELICRAHQVVEDGYEFFA--NRRLITIFSAPNYCGEFDNAGAMMSVD-ETLMCSF 289 (326)
Q Consensus 237 l~~iIRgH~~~~~G~~~~~--~~~~iTifSa~~Y~~~~~n~ga~l~i~-~~~~~~~ 289 (326)
=+.++-|||.. -|.+... +++-+.+.|.|.|.. .|.++.+| +++++..
T Consensus 204 PhVyf~Gnq~~-f~t~~~~~~~~~~v~lv~vP~Fs~----t~~~vlvdl~tLe~~~ 254 (257)
T cd07387 204 PHVYFAGNQPK-FGTKLVEGEEGQRVLLVCVPSFSK----TGTAVLVNLRTLECEP 254 (257)
T ss_pred CCEEEeCCCcc-eeeeEEEcCCCCeEEEEEeCCcCc----CCEEEEEECCcCcEEE
Confidence 46677899886 4555443 256677888898753 45555554 4555543
No 104
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=88.56 E-value=0.52 Score=53.04 Aligned_cols=66 Identities=20% Similarity=0.127 Sum_probs=39.8
Q ss_pred cEEEEeCCCCCH---HHHHHHHHhCCCCCCCcee-eecCccCCCCCc-----HHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 54 PIKICGDIHGQY---SDLLRLFEYGGLPPRSNYL-FLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 54 ~i~ViGDIHG~~---~~L~~ll~~~g~~~~~~~v-fLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
.++.++|+||.+ ..+..+++...-...+.++ ..||++++.+.+ ..++..+-.+. --+...||||..
T Consensus 662 ~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~lg-----~d~~~~GNHEfd 736 (1163)
T PRK09419 662 TILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEMG-----YDASTFGNHEFD 736 (1163)
T ss_pred EEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCcC-----CCEEEecccccc
Confidence 588899999885 4444455543222223333 379999987654 23444443332 235589999963
No 105
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=88.01 E-value=1.4 Score=42.94 Aligned_cols=73 Identities=27% Similarity=0.423 Sum_probs=46.5
Q ss_pred CcEEEEeCCCCCHHHHHHHH---HhCCCCCCCceeeecCccC-CCCCcHHHH------HHH------HHHHhhCCCcEEE
Q 020420 53 APIKICGDIHGQYSDLLRLF---EYGGLPPRSNYLFLGDYVD-RGKQSLETI------CLL------LAYKIKYPENFFL 116 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll---~~~g~~~~~~~vfLGD~VD-RG~~s~evl------~ll------~~lk~~~p~~v~l 116 (326)
|+|.|-|=-||.++.+-+-+ ++.|-.+-+-++++||+=. |....+..+ ..+ +.=..+.|---++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 58899999999999998544 4445456677889999852 222111111 111 1112346666788
Q ss_pred eCCcccccc
Q 020420 117 LRGNHECAS 125 (326)
Q Consensus 117 LrGNHE~~~ 125 (326)
+-||||.+.
T Consensus 81 IGGNHEAsn 89 (456)
T KOG2863|consen 81 IGGNHEASN 89 (456)
T ss_pred ecCchHHHH
Confidence 999999864
No 106
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=87.63 E-value=1 Score=42.29 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=47.2
Q ss_pred CcEEEEeCCCCC--HHHHHHHHHhCCCCCC-CceeeecCccCCC-CCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 53 APIKICGDIHGQ--YSDLLRLFEYGGLPPR-SNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 53 ~~i~ViGDIHG~--~~~L~~ll~~~g~~~~-~~~vfLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
|+++++|||=|. ...+...|..+..... +-+|..||....| .-+-++...|+.+- -.++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~G----vDviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSG----VNYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcC----CCEEEc-cchhcc
Confidence 579999999999 5666777766543333 4455589999766 45677777776654 356666 999875
No 107
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=87.29 E-value=2.2 Score=41.46 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=42.1
Q ss_pred cEEEEeCCCCCHH-----------------HHH--HHHH-hCCCCCCCceeeecCccCCCCCc---HHHHHHHHHHHhhC
Q 020420 54 PIKICGDIHGQYS-----------------DLL--RLFE-YGGLPPRSNYLFLGDYVDRGKQS---LETICLLLAYKIKY 110 (326)
Q Consensus 54 ~i~ViGDIHG~~~-----------------~L~--~ll~-~~g~~~~~~~vfLGD~VDRG~~s---~evl~ll~~lk~~~ 110 (326)
+|+.+.|+|=.+. |+. .+++ .+.....+-+||+||.|+. ... ..++.-..+=.+.+
T Consensus 55 KIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~ 133 (379)
T KOG1432|consen 55 KILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFG-HSTQDAATSLMKAVAPAIDR 133 (379)
T ss_pred EEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCcccc-cccHhHHHHHHHHhhhHhhc
Confidence 5889999996555 111 1111 1122445778999999987 333 23333333333344
Q ss_pred CCcEEEeCCcccccc
Q 020420 111 PENFFLLRGNHECAS 125 (326)
Q Consensus 111 p~~v~lLrGNHE~~~ 125 (326)
.-....+.||||...
T Consensus 134 ~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 134 KIPWAAVLGNHDDES 148 (379)
T ss_pred CCCeEEEeccccccc
Confidence 456788999999864
No 108
>KOG0918 consensus Selenium-binding protein [Inorganic ion transport and metabolism]
Probab=87.25 E-value=0.016 Score=56.69 Aligned_cols=193 Identities=9% Similarity=-0.145 Sum_probs=116.9
Q ss_pred CCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHHHHh----chhHHHHHHHHhccC
Q 020420 80 RSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECKRRF----NVRLWKIFTDCFNCL 155 (326)
Q Consensus 80 ~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~~~~----~~~~~~~~~~~f~~L 155 (326)
.-..|+++++.+++.+.++.+.+-+..+..+..+....++||+.. ++++.++.-.. ...+++..++-++.+
T Consensus 48 ~latVdvdp~s~t~c~vI~r~~~~~~gdelhhsgwn~~ssc~~~~-----~~~R~~LVlp~l~S~riyvid~~~ep~~~~ 122 (476)
T KOG0918|consen 48 YLATVDVDPSSPTYCQVIHRLPMPYLGDELHHSGWNSCSSCHGDS-----SFKRRYLVLPSLNSGRIYVIDVKTEPRKPS 122 (476)
T ss_pred ceeEEecCCCCCcceeeEEEeccCcccchhcccchhhhhhhccCc-----chhhhheeecccccCceEEEEeccCcCccc
Confidence 345889999999999999999998888888888999999999543 23332222111 124566777888888
Q ss_pred CcEEEEcCcEEEecCCCCCCCCChhhhccCCCCCCCCCchhHHHHhhcCCCCC----CCCcccCCCCceeecChHH--HH
Q 020420 156 PVAALIDEKILCMHGGLSPDLHNLNQIRSLPRPTDVPESGLLCDLLWSDPSND----IKGWEANDRGVSYVFGADR--VT 229 (326)
Q Consensus 156 Plaa~i~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dlLWsDP~~~----~~~~~~n~rg~g~~fg~~~--~~ 229 (326)
+..++.+ ++++.||+..|.......+..+.-. .+-+..- ..-.|-++-.. ...|. .++....||.+- .-
T Consensus 123 l~k~i~~-~il~~~~l~~Pht~hcla~g~v~vs-~lGd~~g-n~kg~f~llD~~~~~k~tw~--~~~~~p~~gyDfwyqp 197 (476)
T KOG0918|consen 123 LEKTIDP-DILEKTGLACPHTSHCLASGNVMVS-CLGDAEG-NAKGGFLLLDSDFNEKGTWE--KPGHSPLFGYDFWYQP 197 (476)
T ss_pred eeeeech-hhHhhcCCcCCcccccccCCCeeEE-eeccccc-CCcCCeEEecCccceecccc--cCCCccccccceeecc
Confidence 8886655 9999999999976543333222110 0000000 00002222110 01111 122223333332 33
Q ss_pred HHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCCCCCCCeEEEEEEcCC
Q 020420 230 EFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYCGEFDNAGAMMSVDET 284 (326)
Q Consensus 230 ~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~~~~~n~ga~l~i~~~ 284 (326)
++....+.+...+.|.-...+.....++ .+.++.+-|.-...+.++.+.+..+
T Consensus 198 r~~~mIstewgap~~~~~gf~~~~v~d~--lyg~~lhvy~w~~~~~~QtidL~~~ 250 (476)
T KOG0918|consen 198 RHNVMISTEWGAPNALRKGFNPADVEDG--LYGSHLHVYQWSPGELKQTIDLGDT 250 (476)
T ss_pred ccceEEeecccCchhhhcCCChhHhhcc--ceeeeeEEEecCCccceeEEecCCC
Confidence 4556667777778887654444444454 7788888888777888888888775
No 109
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=87.21 E-value=0.91 Score=42.69 Aligned_cols=66 Identities=18% Similarity=0.148 Sum_probs=36.7
Q ss_pred cEEEEeCCCCCH---------------------HHHHHHHHhCCCC-CCCceeeecCccCCCCCc-----HHHHHHHHHH
Q 020420 54 PIKICGDIHGQY---------------------SDLLRLFEYGGLP-PRSNYLFLGDYVDRGKQS-----LETICLLLAY 106 (326)
Q Consensus 54 ~i~ViGDIHG~~---------------------~~L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s-----~evl~ll~~l 106 (326)
.++-++|+||++ ..+..+++...-. ++.-++..||+++..+.+ ...+..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 467789999875 3444555544322 222344479999876543 2233333332
Q ss_pred HhhCCCcEEEeCCccccc
Q 020420 107 KIKYPENFFLLRGNHECA 124 (326)
Q Consensus 107 k~~~p~~v~lLrGNHE~~ 124 (326)
. -.+.. .||||..
T Consensus 82 g----~D~~~-lGNHefd 94 (281)
T cd07409 82 G----YDAMT-LGNHEFD 94 (281)
T ss_pred C----CCEEE-ecccccc
Confidence 2 23444 4999964
No 110
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=86.25 E-value=1.3 Score=41.03 Aligned_cols=56 Identities=23% Similarity=0.140 Sum_probs=34.1
Q ss_pred CCHHHHHHHHHhCCCCCCC-ceeeecCccCCCCCc-----HHHHHHHHHHHhhCCCcEEEeCCcccc
Q 020420 63 GQYSDLLRLFEYGGLPPRS-NYLFLGDYVDRGKQS-----LETICLLLAYKIKYPENFFLLRGNHEC 123 (326)
Q Consensus 63 G~~~~L~~ll~~~g~~~~~-~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~v~lLrGNHE~ 123 (326)
|.+.-+..+++...-...+ -++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 4466777777765433333 455689999887532 34555554443 23557899996
No 111
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=84.70 E-value=1.4 Score=39.07 Aligned_cols=72 Identities=13% Similarity=0.099 Sum_probs=40.5
Q ss_pred EEEEeCCCCC-----HHHHHHHHHhCC-CCCCCceeeecCccCCCCCcH----------HHHHHHHHHHh-----hCCCc
Q 020420 55 IKICGDIHGQ-----YSDLLRLFEYGG-LPPRSNYLFLGDYVDRGKQSL----------ETICLLLAYKI-----KYPEN 113 (326)
Q Consensus 55 i~ViGDIHG~-----~~~L~~ll~~~g-~~~~~~~vfLGD~VDRG~~s~----------evl~ll~~lk~-----~~p~~ 113 (326)
|++++|+|=. ++.|.++|+.+. -...+.+|++|+++|.-.... .....+..+.. ..--+
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5677887765 667788888776 555567999999999632221 11111212211 12358
Q ss_pred EEEeCCccccccc
Q 020420 114 FFLLRGNHECASV 126 (326)
Q Consensus 114 v~lLrGNHE~~~~ 126 (326)
|+++.|+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999997654
No 112
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.92 E-value=2 Score=43.14 Aligned_cols=69 Identities=22% Similarity=0.403 Sum_probs=53.1
Q ss_pred cCcEEEEeCCCCCHHHHHHHHHhCCC--CCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcc
Q 020420 52 EAPIKICGDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 121 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNH 121 (326)
+.+|.|+||+-|+++.|.+-.+.+.- .+-+-++++|++.+-..++-|++.+...- ...|-.++++-+|-
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 46899999999999999877766533 23467889999999877888887765443 35777788888776
No 113
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=83.60 E-value=1.4 Score=41.47 Aligned_cols=66 Identities=20% Similarity=0.036 Sum_probs=35.1
Q ss_pred cEEEEeCCCCCHHH----------HHHHHHhCCC-----CCCCceeeecCccCCCCCc-----HHHHHHHHHHHhhCCCc
Q 020420 54 PIKICGDIHGQYSD----------LLRLFEYGGL-----PPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYPEN 113 (326)
Q Consensus 54 ~i~ViGDIHG~~~~----------L~~ll~~~g~-----~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p~~ 113 (326)
.|+-+.|+||++.. +..+++...- .++.-++-.||.+...+.+ .-++.++-++. -.
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g----~D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVG----YD 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhC----Cc
Confidence 46788999998533 3444443321 2223344479998543322 22334444433 23
Q ss_pred EEEeCCccccc
Q 020420 114 FFLLRGNHECA 124 (326)
Q Consensus 114 v~lLrGNHE~~ 124 (326)
+.. .||||.-
T Consensus 78 a~~-~GNHEfD 87 (285)
T cd07405 78 AMA-VGNHEFD 87 (285)
T ss_pred EEe-ecccccc
Confidence 444 4999964
No 114
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=81.78 E-value=10 Score=33.83 Aligned_cols=87 Identities=17% Similarity=0.269 Sum_probs=66.2
Q ss_pred CceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCCh----------------HHHHHHhchhH
Q 020420 81 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFY----------------DECKRRFNVRL 144 (326)
Q Consensus 81 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~----------------~e~~~~~~~~~ 144 (326)
..+||+| .|-+.-|.+.++-+++-+|..+-++ -|+-|.+..++...|. .|..+.+-..+
T Consensus 40 ~~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~ltSv 114 (211)
T KOG3339|consen 40 STLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSWLTSV 114 (211)
T ss_pred eEEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhhhhhH
Confidence 4588999 6889999999999998888877766 8999988776544432 23334444567
Q ss_pred HHHHHHHhccCCcEEEEcCcEEEecC-CC
Q 020420 145 WKIFTDCFNCLPVAALIDEKILCMHG-GL 172 (326)
Q Consensus 145 ~~~~~~~f~~LPlaa~i~~~il~vHg-Gi 172 (326)
|..+...+.++++...+..+++.+-| |-
T Consensus 115 ~Tti~all~s~~lv~RirPdlil~NGPGT 143 (211)
T KOG3339|consen 115 FTTIWALLQSFVLVWRIRPDLILCNGPGT 143 (211)
T ss_pred HHHHHHHHHHheEEEecCCCEEEECCCCc
Confidence 88888888889998888888888877 54
No 115
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=81.68 E-value=1.7 Score=41.02 Aligned_cols=66 Identities=20% Similarity=0.065 Sum_probs=36.7
Q ss_pred cEEEEeCCCCCHHH-------------HHHHHHhC----CC-CCCCceeeecCccCCCCCc-------HHHHHHHHHHHh
Q 020420 54 PIKICGDIHGQYSD-------------LLRLFEYG----GL-PPRSNYLFLGDYVDRGKQS-------LETICLLLAYKI 108 (326)
Q Consensus 54 ~i~ViGDIHG~~~~-------------L~~ll~~~----g~-~~~~~~vfLGD~VDRG~~s-------~evl~ll~~lk~ 108 (326)
.|+-..|+||++.. +.++.+.. .. .++.-++..||.++.-+.+ .-++.++-.+.
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~mg- 85 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMMP- 85 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhcC-
Confidence 57888999998631 22222221 11 1222344589999865433 12334443332
Q ss_pred hCCCcEEEeCCccccc
Q 020420 109 KYPENFFLLRGNHECA 124 (326)
Q Consensus 109 ~~p~~v~lLrGNHE~~ 124 (326)
--.+..||||..
T Consensus 86 ----yDa~tlGNHEFd 97 (282)
T cd07407 86 ----YDLLTIGNHELY 97 (282)
T ss_pred ----CcEEeecccccC
Confidence 356788999984
No 116
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=81.67 E-value=1.8 Score=44.21 Aligned_cols=68 Identities=26% Similarity=0.258 Sum_probs=40.9
Q ss_pred cCcEEEEeCCCCCHH------------HHHH---HHHhCCCCCCCc-eeeecCccCCCCC------cHHHHHHHHHHHhh
Q 020420 52 EAPIKICGDIHGQYS------------DLLR---LFEYGGLPPRSN-YLFLGDYVDRGKQ------SLETICLLLAYKIK 109 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~------------~L~~---ll~~~g~~~~~~-~vfLGD~VDRG~~------s~evl~ll~~lk~~ 109 (326)
+-.++-..|+||++. -+.+ +++...-..... +|=.||++++.+- ....+.+|-.++
T Consensus 26 ~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~-- 103 (517)
T COG0737 26 KLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG-- 103 (517)
T ss_pred eEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC--
Confidence 347888999999998 3323 333322222222 3347999998432 334556665554
Q ss_pred CCCcEEEeCCccccc
Q 020420 110 YPENFFLLRGNHECA 124 (326)
Q Consensus 110 ~p~~v~lLrGNHE~~ 124 (326)
-=.+..||||.-
T Consensus 104 ---yDa~tiGNHEFd 115 (517)
T COG0737 104 ---YDAMTLGNHEFD 115 (517)
T ss_pred ---CcEEeecccccc
Confidence 245677999975
No 117
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=81.45 E-value=1.7 Score=43.70 Aligned_cols=41 Identities=24% Similarity=0.382 Sum_probs=33.3
Q ss_pred CceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccccccc
Q 020420 81 SNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASV 126 (326)
Q Consensus 81 ~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~ 126 (326)
+++-.+||+-||||++-.+++-|..+- .+=+-.||||.-++
T Consensus 192 DhLHiVGDIyDRGP~pd~Imd~L~~yh-----svDiQWGNHDilWm 232 (648)
T COG3855 192 DHLHIVGDIYDRGPYPDKIMDTLINYH-----SVDIQWGNHDILWM 232 (648)
T ss_pred hheeeecccccCCCCchHHHHHHhhcc-----cccccccCcceEEe
Confidence 456678999999999999999886652 57788999996544
No 118
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=79.07 E-value=4.7 Score=37.65 Aligned_cols=66 Identities=18% Similarity=0.127 Sum_probs=42.7
Q ss_pred cEEEEeCCCCCHH--HHHHHHHhCCCCC-CCceeeecCccCCC-CCcHHHHHHHHHHHhhCCCcEEEeCCccccc
Q 020420 54 PIKICGDIHGQYS--DLLRLFEYGGLPP-RSNYLFLGDYVDRG-KQSLETICLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 54 ~i~ViGDIHG~~~--~L~~ll~~~g~~~-~~~~vfLGD~VDRG-~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
++.+||||=|.-. .+.+.|....-.. .+-+|-.||-.-.| .-+-++...|..+. -.+..+ ||||..
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G----~D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAG----VDVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcC----CCEEEe-cccccC
Confidence 5789999999843 3455555442222 23344579998776 46777777777664 245555 999864
No 119
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=79.03 E-value=3 Score=40.06 Aligned_cols=66 Identities=20% Similarity=0.047 Sum_probs=38.5
Q ss_pred cEEEEeCCCCCHH------HHHHHHHhCCC-----CCCCceeeecCccCCCCC-------------cHHHHHHHHHHHhh
Q 020420 54 PIKICGDIHGQYS------DLLRLFEYGGL-----PPRSNYLFLGDYVDRGKQ-------------SLETICLLLAYKIK 109 (326)
Q Consensus 54 ~i~ViGDIHG~~~------~L~~ll~~~g~-----~~~~~~vfLGD~VDRG~~-------------s~evl~ll~~lk~~ 109 (326)
.++-+.|+||++. .+..+++...- .++.-++..||.+..++. ..-++.++-++.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 3667899999953 34334443211 223345567999976543 334455555554
Q ss_pred CCCcEEEeCCccccc
Q 020420 110 YPENFFLLRGNHECA 124 (326)
Q Consensus 110 ~p~~v~lLrGNHE~~ 124 (326)
-=.+..||||.-
T Consensus 80 ---~Da~tlGNHEFD 91 (313)
T cd08162 80 ---VQAIALGNHEFD 91 (313)
T ss_pred ---CcEEeccccccc
Confidence 245678999953
No 120
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=76.90 E-value=3.2 Score=43.88 Aligned_cols=69 Identities=17% Similarity=0.103 Sum_probs=42.1
Q ss_pred ecCcEEEEeCCCCCHHH----------------HHHHHHhCCCC-CCCceeeecCccCCCCCcH-------------HHH
Q 020420 51 IEAPIKICGDIHGQYSD----------------LLRLFEYGGLP-PRSNYLFLGDYVDRGKQSL-------------ETI 100 (326)
Q Consensus 51 l~~~i~ViGDIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s~-------------evl 100 (326)
+..+|+-..|+||++.. +..+++...-. ++.-+|-.||.+...+.+- -++
T Consensus 24 ~~L~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i 103 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVY 103 (649)
T ss_pred ceEEEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHH
Confidence 34578889999999743 33344433211 2334556899998766431 245
Q ss_pred HHHHHHHhhCCCcEEEeCCccccc
Q 020420 101 CLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 101 ~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
..+-.|. --....||||.-
T Consensus 104 ~amN~lg-----yDa~tlGNHEFd 122 (649)
T PRK09420 104 KAMNTLD-----YDVGNLGNHEFN 122 (649)
T ss_pred HHHHhcC-----CcEEeccchhhh
Confidence 5555554 346678999964
No 121
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=76.89 E-value=3 Score=43.88 Aligned_cols=67 Identities=19% Similarity=0.087 Sum_probs=39.6
Q ss_pred CcEEEEeCCCCCHHH----------------HHHHHHhCCCC-CCCceeeecCccCCCCCc-------------HHHHHH
Q 020420 53 APIKICGDIHGQYSD----------------LLRLFEYGGLP-PRSNYLFLGDYVDRGKQS-------------LETICL 102 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~----------------L~~ll~~~g~~-~~~~~vfLGD~VDRG~~s-------------~evl~l 102 (326)
-+|+-..|+||++.. +..+++...-. ++.-+|-.||.+...+.+ .-++.+
T Consensus 3 l~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~ 82 (626)
T TIGR01390 3 LRIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKA 82 (626)
T ss_pred EEEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHH
Confidence 367888999999643 33344443211 233455589999865543 224444
Q ss_pred HHHHHhhCCCcEEEeCCccccc
Q 020420 103 LLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 103 l~~lk~~~p~~v~lLrGNHE~~ 124 (326)
+-.|. -=....||||.-
T Consensus 83 mN~lg-----yDa~tlGNHEFd 99 (626)
T TIGR01390 83 MNLLK-----YDVGNLGNHEFN 99 (626)
T ss_pred HhhcC-----ccEEeccccccc
Confidence 44443 245678999954
No 122
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=75.45 E-value=3.4 Score=46.62 Aligned_cols=67 Identities=22% Similarity=0.186 Sum_probs=38.4
Q ss_pred CcEEEEeCCCCCHHH----------------HHHHHHhCCCCCCCcee-eecCccCCCCC--------------cHHHHH
Q 020420 53 APIKICGDIHGQYSD----------------LLRLFEYGGLPPRSNYL-FLGDYVDRGKQ--------------SLETIC 101 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~----------------L~~ll~~~g~~~~~~~v-fLGD~VDRG~~--------------s~evl~ 101 (326)
-+|+-.+|+||++.. +..+++...-.....++ -.||.+...+. ..-++.
T Consensus 42 l~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~ 121 (1163)
T PRK09419 42 IQILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIK 121 (1163)
T ss_pred EEEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHH
Confidence 468999999998633 33444443221222333 47999987652 123344
Q ss_pred HHHHHHhhCCCcEEEeCCccccc
Q 020420 102 LLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 102 ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
.+-.+. --....||||.-
T Consensus 122 ~mN~lg-----yDa~~lGNHEFd 139 (1163)
T PRK09419 122 AMNALG-----YDAGTLGNHEFN 139 (1163)
T ss_pred HHhhcC-----ccEEeecccccc
Confidence 443332 245668999963
No 123
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=71.65 E-value=4.9 Score=37.95 Aligned_cols=65 Identities=25% Similarity=0.298 Sum_probs=41.9
Q ss_pred CcEEEEeCCCCCHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCC-CcEEEeCCcccccc
Q 020420 53 APIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYP-ENFFLLRGNHECAS 125 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p-~~v~lLrGNHE~~~ 125 (326)
.+++.|+|.|+...+.. ..|+.+-++-+||+..-|. +-||..+=-.+- ..| ..=++|+||||...
T Consensus 62 ~r~VcisdtH~~~~~i~------~~p~gDvlihagdfT~~g~-~~ev~~fn~~~g-slph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 62 ARFVCISDTHELTFDIN------DIPDGDVLIHAGDFTNLGL-PEEVIKFNEWLG-SLPHEYKIVIAGNHELTF 127 (305)
T ss_pred eEEEEecCcccccCccc------cCCCCceEEeccCCccccC-HHHHHhhhHHhc-cCcceeeEEEeeccceee
Confidence 36899999998655443 3566677788999987664 445544322221 223 34567999999754
No 124
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=69.20 E-value=6.3 Score=42.81 Aligned_cols=68 Identities=21% Similarity=0.101 Sum_probs=40.0
Q ss_pred cCcEEEEeCCCCCHHH----------------HHHHHHhCCC-CCCCceeeecCccCCCCCc--------------HHHH
Q 020420 52 EAPIKICGDIHGQYSD----------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQS--------------LETI 100 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~~----------------L~~ll~~~g~-~~~~~~vfLGD~VDRG~~s--------------~evl 100 (326)
+-+|+-..|+||++.. +..+++...- .++.-+|..||.+..-+.+ .-++
T Consensus 115 ~LtIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i 194 (814)
T PRK11907 115 DVRILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMY 194 (814)
T ss_pred EEEEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHH
Confidence 3468889999999643 2223333221 1233455689999765432 1245
Q ss_pred HHHHHHHhhCCCcEEEeCCccccc
Q 020420 101 CLLLAYKIKYPENFFLLRGNHECA 124 (326)
Q Consensus 101 ~ll~~lk~~~p~~v~lLrGNHE~~ 124 (326)
.++-.|. --....||||.-
T Consensus 195 ~amN~LG-----yDA~tLGNHEFD 213 (814)
T PRK11907 195 AALEALG-----FDAGTLGNHEFN 213 (814)
T ss_pred HHHhccC-----CCEEEechhhcc
Confidence 5555544 246778999964
No 125
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=68.95 E-value=17 Score=34.70 Aligned_cols=73 Identities=14% Similarity=0.212 Sum_probs=47.8
Q ss_pred CcEEEEeCCCCC----HHHHHHHHHhCC-CCC----CCceeeecCccCCC----CCcH----HHHHHHHHH-HhhCC---
Q 020420 53 APIKICGDIHGQ----YSDLLRLFEYGG-LPP----RSNYLFLGDYVDRG----KQSL----ETICLLLAY-KIKYP--- 111 (326)
Q Consensus 53 ~~i~ViGDIHG~----~~~L~~ll~~~g-~~~----~~~~vfLGD~VDRG----~~s~----evl~ll~~l-k~~~p--- 111 (326)
..++|+||+|=+ ++.|.++|+... .-+ ..-+||+|+++.+. ..+. |-.+-|..+ ...+|
T Consensus 28 ~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp~L~ 107 (291)
T PTZ00235 28 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFKLIL 107 (291)
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhChHHH
Confidence 468999999954 778888888762 212 34588999999763 2222 333344332 22344
Q ss_pred --CcEEEeCCcccccc
Q 020420 112 --ENFFLLRGNHECAS 125 (326)
Q Consensus 112 --~~v~lLrGNHE~~~ 125 (326)
.++++++|-.|-+.
T Consensus 108 ~~s~fVFVPGpnDPw~ 123 (291)
T PTZ00235 108 EHCYLIFIPGINDPCA 123 (291)
T ss_pred hcCeEEEECCCCCCCc
Confidence 68999999999753
No 126
>PF14164 YqzH: YqzH-like protein
Probab=65.81 E-value=24 Score=25.89 Aligned_cols=47 Identities=21% Similarity=0.303 Sum_probs=39.3
Q ss_pred CChhHHHHHHHHHHhccCCCCccccCCHHHHHHHHHHHHHHHhhCCC
Q 020420 1 MDPAVLDGVIRRLLEVRGKPGKQVQLSESEIRQLCVVSKGIFLRQPN 47 (326)
Q Consensus 1 ~~~~~~~~~i~~l~~~~~~~~~~~~l~~~~~~~l~~~a~~il~~ep~ 47 (326)
||..-|+.+|.+-+..-.......+|++.|...|+......-.++|.
T Consensus 1 M~ek~I~Kmi~~~l~QYg~d~~~~pls~~E~~~L~~~i~~~~~~~~~ 47 (64)
T PF14164_consen 1 MNEKLIEKMIINCLRQYGYDVECMPLSDEEWEELCKHIQERKNEEPD 47 (64)
T ss_pred CcHHHHHHHHHHHHHHhCCcccCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 77778888888888776455566799999999999999999999886
No 127
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=63.28 E-value=14 Score=36.85 Aligned_cols=72 Identities=10% Similarity=0.044 Sum_probs=39.2
Q ss_pred CcEEEEeCCCCCHHHH---HHHHHhCCC-CCCCceeeecCccCCCCCcHHH------HHHHHHHHh-hCCCcEEEeCCcc
Q 020420 53 APIKICGDIHGQYSDL---LRLFEYGGL-PPRSNYLFLGDYVDRGKQSLET------ICLLLAYKI-KYPENFFLLRGNH 121 (326)
Q Consensus 53 ~~i~ViGDIHG~~~~L---~~ll~~~g~-~~~~~~vfLGD~VDRG~~s~ev------l~ll~~lk~-~~p~~v~lLrGNH 121 (326)
-+++++||-=+-...- .+.+....- .+.+-+|-+||-++.|..|+.- .+-++.-.. ...-..+++.|||
T Consensus 27 l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~vLGNH 106 (394)
T PTZ00422 27 LRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQIPFFTVLGQA 106 (394)
T ss_pred EEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccccCCCCCccchhHHhhHhhhccCcchhhCCCeEEeCCcc
Confidence 3699999954322221 222332222 2334566799998888776432 233321110 0112699999999
Q ss_pred ccc
Q 020420 122 ECA 124 (326)
Q Consensus 122 E~~ 124 (326)
|.+
T Consensus 107 Dy~ 109 (394)
T PTZ00422 107 DWD 109 (394)
T ss_pred ccc
Confidence 964
No 128
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=63.19 E-value=12 Score=38.75 Aligned_cols=65 Identities=22% Similarity=0.085 Sum_probs=36.6
Q ss_pred EEEEeCCCCCHHH---------------------HHHHHHhCCC-CCCCceeeecCccCCCCCc-----HHHHHHHHHHH
Q 020420 55 IKICGDIHGQYSD---------------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQS-----LETICLLLAYK 107 (326)
Q Consensus 55 i~ViGDIHG~~~~---------------------L~~ll~~~g~-~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk 107 (326)
++-+.|+||++.. +..+++...- .++.-++..||.+...+.+ ...+.++-++.
T Consensus 3 ILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~g 82 (550)
T TIGR01530 3 IIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAAG 82 (550)
T ss_pred EEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhccC
Confidence 5667888887543 3333333221 1234455689999765433 22344443433
Q ss_pred hhCCCcEEEeCCccccc
Q 020420 108 IKYPENFFLLRGNHECA 124 (326)
Q Consensus 108 ~~~p~~v~lLrGNHE~~ 124 (326)
--....||||.-
T Consensus 83 -----~Da~~lGNHEFd 94 (550)
T TIGR01530 83 -----FDFFTLGNHEFD 94 (550)
T ss_pred -----CCEEEecccccc
Confidence 356788999964
No 129
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=59.36 E-value=13 Score=38.32 Aligned_cols=68 Identities=19% Similarity=0.051 Sum_probs=36.4
Q ss_pred cCcEEEEeCCCCCHH----------HHHHHHHhCC-----CCCCCceeeecCccCCCCCc-----HHHHHHHHHHHhhCC
Q 020420 52 EAPIKICGDIHGQYS----------DLLRLFEYGG-----LPPRSNYLFLGDYVDRGKQS-----LETICLLLAYKIKYP 111 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~----------~L~~ll~~~g-----~~~~~~~vfLGD~VDRG~~s-----~evl~ll~~lk~~~p 111 (326)
+-.++-+.|+||++. .+..+++... -.++.-++..||.+...+.+ .-++.++-.+.
T Consensus 34 ~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g---- 109 (551)
T PRK09558 34 KITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG---- 109 (551)
T ss_pred EEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----
Confidence 346888999999874 1233343321 12233455579998643322 12233333332
Q ss_pred CcEEEeCCccccc
Q 020420 112 ENFFLLRGNHECA 124 (326)
Q Consensus 112 ~~v~lLrGNHE~~ 124 (326)
-.+.. .||||.-
T Consensus 110 ~Da~t-lGNHEFD 121 (551)
T PRK09558 110 YDAMA-VGNHEFD 121 (551)
T ss_pred CCEEc-ccccccC
Confidence 23444 4999964
No 130
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=54.40 E-value=16 Score=39.66 Aligned_cols=67 Identities=21% Similarity=0.102 Sum_probs=38.8
Q ss_pred cCcEEEEeCCCCCHHH----------------HHHHHHhCCC-CCCCceeeecCccCCCCCc------------------
Q 020420 52 EAPIKICGDIHGQYSD----------------LLRLFEYGGL-PPRSNYLFLGDYVDRGKQS------------------ 96 (326)
Q Consensus 52 ~~~i~ViGDIHG~~~~----------------L~~ll~~~g~-~~~~~~vfLGD~VDRG~~s------------------ 96 (326)
.-+|+-..|+||++.. +..+++...- .++.-+|-.||++-..+.+
T Consensus 39 ~L~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~ 118 (780)
T PRK09418 39 NLRILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSY 118 (780)
T ss_pred EEEEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhccccccccccccc
Confidence 4478999999999632 2333433321 1233455689988544322
Q ss_pred -HHHHHHHHHHHhhCCCcEEEeCCcccc
Q 020420 97 -LETICLLLAYKIKYPENFFLLRGNHEC 123 (326)
Q Consensus 97 -~evl~ll~~lk~~~p~~v~lLrGNHE~ 123 (326)
.-++.++-.|. -=....||||.
T Consensus 119 ~~p~i~~mN~lg-----yDa~tlGNHEF 141 (780)
T PRK09418 119 THPLYRLMNLMK-----YDVISLGNHEF 141 (780)
T ss_pred chHHHHHHhccC-----CCEEecccccc
Confidence 23445554443 24567899995
No 131
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=49.36 E-value=52 Score=34.11 Aligned_cols=54 Identities=20% Similarity=0.194 Sum_probs=38.1
Q ss_pred CcEEEEeCCCC------------CHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHH
Q 020420 53 APIKICGDIHG------------QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAY 106 (326)
Q Consensus 53 ~~i~ViGDIHG------------~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~l 106 (326)
.+|.|-.|.|= .|..|..+|..+.-..-+-++.=||+++-..-|.++|.-.+.+
T Consensus 14 irILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNkPSr~~L~~~i~l 79 (646)
T KOG2310|consen 14 IRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENKPSRKTLHRCLEL 79 (646)
T ss_pred eEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCCccHHHHHHHHHH
Confidence 57889999983 4778888888765444444555699999888887776554443
No 132
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=46.02 E-value=58 Score=24.65 Aligned_cols=71 Identities=13% Similarity=0.034 Sum_probs=46.1
Q ss_pred ecCcEEEEeCCCCCHHHHHHHHHhCCC--CCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcc
Q 020420 51 IEAPIKICGDIHGQYSDLLRLFEYGGL--PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNH 121 (326)
Q Consensus 51 l~~~i~ViGDIHG~~~~L~~ll~~~g~--~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNH 121 (326)
....+.|+=|---|.+.+..+++.+.- +....++.+|+.-|+|..+.+....+-.+...+...+++...|+
T Consensus 10 ~~~~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 10 EPNGPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp EETTEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred eCCCcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 334577777877788888888776532 34455677999999888887766666666555566666655554
No 133
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=44.71 E-value=17 Score=38.12 Aligned_cols=39 Identities=26% Similarity=0.402 Sum_probs=32.7
Q ss_pred ceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccc
Q 020420 82 NYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECAS 125 (326)
Q Consensus 82 ~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~ 125 (326)
++-.+||+.||||.+-.+++.|+.. .+|=+-.||||--+
T Consensus 187 hLHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 187 HLHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILW 225 (640)
T ss_pred heeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHH
Confidence 4567899999999999999999865 36888999999433
No 134
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=42.81 E-value=40 Score=34.14 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCceEEEeeeeeccceEEecCCeE
Q 020420 227 RVTEFLQKHDLELICRAHQVVEDGYEFFANRRL 259 (326)
Q Consensus 227 ~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~ 259 (326)
.++..+-++++++++-||.-.-+....-.|.++
T Consensus 323 ~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 323 GLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 689999999999999999987666655556544
No 135
>PHA02580 8 baseplate wedge subunit; Provisional
Probab=40.80 E-value=1.7e+02 Score=27.79 Aligned_cols=83 Identities=24% Similarity=0.239 Sum_probs=49.6
Q ss_pred CCceEEEeeeeeccce---EEecCCeEEEEecCCCCCCCCCCeEEEEE----EcCCcceEEEEeccCCCCCCCccCcccc
Q 020420 236 DLELICRAHQVVEDGY---EFFANRRLITIFSAPNYCGEFDNAGAMMS----VDETLMCSFQILKPADKKPKFSFGSTTT 308 (326)
Q Consensus 236 ~l~~iIRgH~~~~~G~---~~~~~~~~iTifSa~~Y~~~~~n~ga~l~----i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (326)
.++.+|+--+-.+..| ..|+=+-++++-||| |.-...-+|=++. |-+...|++..+.-...-.+.-..|+-+
T Consensus 85 ~ld~VvpRkDWgd~ry~np~~f~i~dIVvvNsap-yNrt~~g~GwmvYRcvDvP~~G~CSI~si~~K~eC~~iGGkWtp~ 163 (331)
T PHA02580 85 MLDAVIPRKDWGDTRYPNPKTFFINDIVVVNSAP-YNRTDSGAGWMVYRCVDVPDTGSCSISSITNKVECIKLGGKWTPT 163 (331)
T ss_pred hhhheecccccCCCCCCCCeEEEecCEEEEcccc-cccCCCCCceEEEEEeccCCCceeeeeeccCccceeeeCCEECCC
Confidence 3667777666554444 133345688899999 4332233443332 3355667766665443334445577888
Q ss_pred CCCCCCCcccc
Q 020420 309 VKSGAPPSRMK 319 (326)
Q Consensus 309 ~~~~~~~~~~~ 319 (326)
.++.+||++.-
T Consensus 164 ~~s~~pP~G~~ 174 (331)
T PHA02580 164 HESVEPPRGTG 174 (331)
T ss_pred cccCCCCCCcC
Confidence 89999998753
No 136
>PF12641 Flavodoxin_3: Flavodoxin domain
Probab=40.64 E-value=1.2e+02 Score=26.24 Aligned_cols=102 Identities=15% Similarity=0.204 Sum_probs=61.2
Q ss_pred EEEeCCCCCHHHHHHHHHh-CCC------------CCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCccc
Q 020420 56 KICGDIHGQYSDLLRLFEY-GGL------------PPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHE 122 (326)
Q Consensus 56 ~ViGDIHG~~~~L~~ll~~-~g~------------~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE 122 (326)
++.+-.+||-..+.+.+.. ++- ....++||+|=.+|+|.-+-++..+|-.|+ +.+|++.
T Consensus 2 IvYsS~TGNTkkvA~aI~~~l~~~~~~~~~~~~~~~~~yD~i~lG~w~d~G~~d~~~~~fl~~l~---~KkV~lF----- 73 (160)
T PF12641_consen 2 IVYSSRTGNTKKVAEAIAEALGAKDIVSVEEPPEDLEDYDLIFLGFWIDKGTPDKDMKEFLKKLK---GKKVALF----- 73 (160)
T ss_pred EEEECCCChHHHHHHHHHHHCCCceeEeccccccCCCCCCEEEEEcCccCCCCCHHHHHHHHHcc---CCeEEEE-----
Confidence 5666678887777665543 222 133579999999999999999999987764 4555543
Q ss_pred ccccccccCChHHHHHHhchhHHHHHHHHhccCCcEEEEcCcEEEecCCCCCCC
Q 020420 123 CASVNRVYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPDL 176 (326)
Q Consensus 123 ~~~~~~~~gf~~e~~~~~~~~~~~~~~~~f~~LPlaa~i~~~il~vHgGi~p~~ 176 (326)
...|+.. ...|...+.+....++.. ...+- ..|+|+|-++|.+
T Consensus 74 -----~T~G~~~--~s~~~~~~~~~~~~~~~~---~~~~l-g~f~CqGk~~~~~ 116 (160)
T PF12641_consen 74 -----GTAGAGP--DSEYAKKILKNVEALLPK---GNEIL-GTFMCQGKMDPKV 116 (160)
T ss_pred -----EecCCCC--chHHHHHHHHHHHHhhcc---CCeec-ceEEeCCcCCHHH
Confidence 2223321 122233344444444332 22333 4678899998764
No 137
>PF15007 CEP44: Centrosomal spindle body, CEP44
Probab=39.10 E-value=19 Score=30.26 Aligned_cols=85 Identities=26% Similarity=0.418 Sum_probs=47.2
Q ss_pred CCCCCHHHHHHHHHhCCCCCCCce--eeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEeCCcccccccccccCChHHHH
Q 020420 60 DIHGQYSDLLRLFEYGGLPPRSNY--LFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASVNRVYGFYDECK 137 (326)
Q Consensus 60 DIHG~~~~L~~ll~~~g~~~~~~~--vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lLrGNHE~~~~~~~~gf~~e~~ 137 (326)
|+.|++..|++.|+.+++|..-.+ +-.|| +-..+.++-.+-+.|+..|.-.. +...+.....--
T Consensus 1 Dl~~~l~~L~~~Lr~~~yp~~vd~~~l~~G~-------p~afLpil~~~L~~yS~~va~~l-------~~~g~eL~~k~D 66 (131)
T PF15007_consen 1 DLKGNLRRLEQELRSLKYPDEVDYQGLYKGD-------PSAFLPILHYALLSYSTHVARLL-------VDRGYELYGKND 66 (131)
T ss_pred ChhhHHHHHHHHHHHCCCCCccCHHHHhcCC-------HHHHHHHHHHHHHcCCHHHHHHH-------HHcCchhhcCCh
Confidence 899999999999999999844332 23454 32333333222333443332211 111111122222
Q ss_pred HHhchhHHHHHHHHhccCCcE
Q 020420 138 RRFNVRLWKIFTDCFNCLPVA 158 (326)
Q Consensus 138 ~~~~~~~~~~~~~~f~~LPla 158 (326)
.++-+.+|+.+.+.|.+-|.-
T Consensus 67 ~RF~E~vyk~LRdef~YkP~l 87 (131)
T PF15007_consen 67 LRFVESVYKLLRDEFNYKPSL 87 (131)
T ss_pred HHHHHHHHHHHHHHhCCCCCC
Confidence 345567888888888888864
No 138
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=37.25 E-value=78 Score=29.48 Aligned_cols=58 Identities=28% Similarity=0.367 Sum_probs=32.3
Q ss_pred CCcEEEeCCcccccccccccCChHHHH-HHh-chhHHHHHHHHhccCCcEEEEcC-cEEEecCCCCCC
Q 020420 111 PENFFLLRGNHECASVNRVYGFYDECK-RRF-NVRLWKIFTDCFNCLPVAALIDE-KILCMHGGLSPD 175 (326)
Q Consensus 111 p~~v~lLrGNHE~~~~~~~~gf~~e~~-~~~-~~~~~~~~~~~f~~LPlaa~i~~-~il~vHgGi~p~ 175 (326)
.++|++|-||||... +..|. ..+. .+. ....|. ....+|.+-.-.+ +++..|-||-.+
T Consensus 127 nknvvvlagnhein~-ngny~--arlanhkls~gDTYn----lIKtldVC~YD~erkvltsHHGIird 187 (318)
T PF13258_consen 127 NKNVVVLAGNHEINF-NGNYM--ARLANHKLSAGDTYN----LIKTLDVCNYDPERKVLTSHHGIIRD 187 (318)
T ss_pred ccceEEEecCceecc-CchHH--HHHhhCCCCccchhh----ccccccccccCcchhhhhcccCceec
Confidence 368999999999752 22221 1111 111 123333 3466787644322 688899998653
No 139
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=28.07 E-value=1.6e+02 Score=23.32 Aligned_cols=44 Identities=16% Similarity=0.483 Sum_probs=30.2
Q ss_pred HHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhCCCcEEEe
Q 020420 65 YSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLL 117 (326)
Q Consensus 65 ~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~p~~v~lL 117 (326)
...+.++++. -|+.++|++|| -|..-.|+..-+ ...+|++|..+
T Consensus 52 ~~~i~~i~~~---fP~~kfiLIGD---sgq~DpeiY~~i---a~~~P~~i~ai 95 (100)
T PF09949_consen 52 RDNIERILRD---FPERKFILIGD---SGQHDPEIYAEI---ARRFPGRILAI 95 (100)
T ss_pred HHHHHHHHHH---CCCCcEEEEee---CCCcCHHHHHHH---HHHCCCCEEEE
Confidence 4455666654 45778999998 677778887654 34589887654
No 140
>PRK10773 murF UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; Reviewed
Probab=27.65 E-value=3.4e+02 Score=27.09 Aligned_cols=66 Identities=11% Similarity=0.037 Sum_probs=45.9
Q ss_pred CcEEEEeCCCC-CHHHHHHHHHhCCCCCCCceeeecCccCCCCCcHHHHHHHHHHHhhC-CCcEEEeCC
Q 020420 53 APIKICGDIHG-QYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKY-PENFFLLRG 119 (326)
Q Consensus 53 ~~i~ViGDIHG-~~~~L~~ll~~~g~~~~~~~vfLGD~VDRG~~s~evl~ll~~lk~~~-p~~v~lLrG 119 (326)
..++||=|-|. +.+.+.+.|+.+.-.+..+++.+||+.+.|+++.+.-.-+-.+-... .+.++++ |
T Consensus 325 ~g~~iIDDsYn~nP~s~~aaL~~l~~~~~r~i~VlG~m~elG~~~~~~h~~~~~~~~~~~~d~v~~~-G 392 (453)
T PRK10773 325 EGQLLLDDSYNANVGSMTAAAQVLAEMPGYRVMVVGDMAELGAESEACHRQVGEAAKAAGIDKVLSV-G 392 (453)
T ss_pred CCeEEEEcCCCCCHHHHHHHHHHHHhCCCCEEEEECChhhcchHHHHHHHHHHHHHHHcCCCEEEEE-C
Confidence 45788889555 57888888776643334568889999999999988776665544333 3555544 5
No 141
>PF09637 Med18: Med18 protein; InterPro: IPR019095 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Med18 is one subunit of the Mediator complex and a component of the head module that is involved in stimulating basal RNA polymerase II (PolII) transcription. Med18 consists of an eight-stranded beta-barrel with a central pore and three flanking helices. It complexes with Med8 and Med20 proteins by forming a heterodimer of two-fold symmetry with Med20 and binding the C-terminal alpha-helix region of Med8 across the top of its barrel. This complex creates a multipartite TBP-binding site that can be modulated by transcriptional activators []. ; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 2HZM_F 2HZS_H 3RJ1_E 3C0T_A.
Probab=27.25 E-value=1.2e+02 Score=28.08 Aligned_cols=39 Identities=23% Similarity=0.444 Sum_probs=32.1
Q ss_pred ChHHHHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecC
Q 020420 224 GADRVTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSA 265 (326)
Q Consensus 224 g~~~~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa 265 (326)
....+-.||+.+|.. .-+|++.+||.|++++-+|+||--
T Consensus 139 ~~~~~~~fl~~lGy~---~~~Eyv~~G~~F~~g~i~I~l~ri 177 (250)
T PF09637_consen 139 TSGSLLSFLNELGYR---FDYEYVVEGYRFFKGDIVIELFRI 177 (250)
T ss_dssp SSSSHHHHHHHTTEE---EEEEEEEEEEEEEECCEEEEEEEE
T ss_pred CCCCHHHHHHHcCCc---eEEEEEEEEEEEEECCEEEEEEEE
Confidence 456688999999965 478999999999998878887654
No 142
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=24.04 E-value=1.4e+02 Score=26.93 Aligned_cols=39 Identities=26% Similarity=0.462 Sum_probs=28.1
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCC
Q 020420 228 VTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNY 268 (326)
Q Consensus 228 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y 268 (326)
+.+.+-..|+++||-+|..+..+++.. ++++| +||-=|+
T Consensus 199 la~~l~~~G~D~IiG~H~Hv~q~~E~~-~~~~I-~YSlGNf 237 (239)
T cd07381 199 LARALIDAGADLVIGHHPHVLQGIEIY-KGKLI-FYSLGNF 237 (239)
T ss_pred HHHHHHHCCCCEEEcCCCCcCCCeEEE-CCEEE-EEcCCCc
Confidence 333444569999999999999999985 44544 6776554
No 143
>COG3918 Predicted membrane protein [Function unknown]
Probab=22.72 E-value=36 Score=28.24 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=17.1
Q ss_pred CccccCCCCCCCcccccccccC
Q 020420 304 GSTTTVKSGAPPSRMKSFLGAK 325 (326)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~ 325 (326)
|-.+-|+|.||+|.+|+-.|++
T Consensus 59 ELvtDqlPsTPsRkVp~qFgaR 80 (153)
T COG3918 59 ELVTDQLPSTPSRKVPPQFGAR 80 (153)
T ss_pred HHHhccCCCCCCCcCChhHhhh
Confidence 3347789999999988777765
No 144
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=21.73 E-value=1.7e+02 Score=26.61 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=30.0
Q ss_pred HHHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCC
Q 020420 228 VTEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYC 269 (326)
Q Consensus 228 ~~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~ 269 (326)
+.+.|-..|.++||-+|..+..|++.. ++++| +||-=|+.
T Consensus 208 ~a~~lidaGaDiIiG~HpHv~q~~E~y-~~~~I-~YSLGNfi 247 (250)
T PF09587_consen 208 LARALIDAGADIIIGHHPHVIQPVEIY-KGKPI-FYSLGNFI 247 (250)
T ss_pred HHHHHHHcCCCEEEeCCCCcccceEEE-CCEEE-EEeCcccc
Confidence 344444589999999999999999987 45544 68876654
No 145
>PLN02965 Probable pheophorbidase
Probab=20.94 E-value=1.2e+02 Score=27.15 Aligned_cols=21 Identities=14% Similarity=0.216 Sum_probs=16.8
Q ss_pred HHHHHHHHhCCC--ceEEEeeee
Q 020420 226 DRVTEFLQKHDL--ELICRAHQV 246 (326)
Q Consensus 226 ~~~~~fl~~~~l--~~iIRgH~~ 246 (326)
+.+.++++..+. +.++-||+.
T Consensus 59 ~dl~~~l~~l~~~~~~~lvGhSm 81 (255)
T PLN02965 59 RPLFALLSDLPPDHKVILVGHSI 81 (255)
T ss_pred HHHHHHHHhcCCCCCEEEEecCc
Confidence 347788998875 799999986
No 146
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=20.31 E-value=1.7e+02 Score=26.37 Aligned_cols=39 Identities=21% Similarity=0.333 Sum_probs=28.6
Q ss_pred HHHHHhCCCceEEEeeeeeccceEEecCCeEEEEecCCCCC
Q 020420 229 TEFLQKHDLELICRAHQVVEDGYEFFANRRLITIFSAPNYC 269 (326)
Q Consensus 229 ~~fl~~~~l~~iIRgH~~~~~G~~~~~~~~~iTifSa~~Y~ 269 (326)
.+.+-..|+++||-||..+..+++.. ++++| +||-=|+.
T Consensus 198 A~~l~~~G~DvIiG~H~H~~~~~e~~-~~~~I-~YslGNfi 236 (239)
T smart00854 198 AHALIDAGADVVIGHHPHVLQPIEIY-KGKLI-AYSLGNFI 236 (239)
T ss_pred HHHHHHcCCCEEEcCCCCcCCceEEE-CCEEE-EEcccccc
Confidence 33443479999999999998999875 45665 67766553
Done!