Query 020421
Match_columns 326
No_of_seqs 120 out of 1315
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 16:36:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.8 7.7E-17 2.6E-21 150.2 24.7 245 28-282 6-253 (445)
2 3gia_A Uncharacterized protein 99.7 6.5E-15 2.2E-19 137.2 22.0 239 28-280 4-248 (444)
3 4djk_A Probable glutamate/gamm 99.5 2.8E-11 9.6E-16 114.6 26.7 244 27-282 8-263 (511)
4 2jln_A MHP1; hydantoin, transp 98.8 1.4E-06 4.9E-11 81.9 24.1 250 30-290 25-289 (501)
5 3dh4_A Sodium/glucose cotransp 97.8 0.0063 2.2E-07 57.4 22.6 159 28-199 18-178 (530)
6 2xq2_A Sodium/glucose cotransp 97.4 0.05 1.7E-06 52.0 23.1 156 29-197 48-205 (593)
7 2a65_A Leutaa, Na(+):neurotran 93.0 5.8 0.0002 36.9 23.9 221 30-258 7-280 (519)
8 4ain_A Glycine betaine transpo 84.4 21 0.00071 33.3 13.5 121 28-149 92-228 (539)
9 2wsw_A BCCT family betaine/car 69.5 71 0.0024 29.5 16.9 157 28-185 87-268 (509)
10 3gia_A Uncharacterized protein 42.0 1.8E+02 0.0062 25.6 11.8 48 101-148 258-305 (444)
11 4hkr_A Calcium release-activat 32.6 1.9E+02 0.0064 23.0 8.0 52 72-132 33-84 (214)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.77 E-value=7.7e-17 Score=150.24 Aligned_cols=245 Identities=11% Similarity=0.059 Sum_probs=177.7
Q ss_pred CCCCCCHHHHHHHHHHhhhhhhcchhHHHHHhhcHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcCcchhhH
Q 020421 28 VTGTASAAQTLGNIIVSIVGTGVLGLPFAFRVAGWLAGCLGVMIAGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYGDLG 107 (326)
Q Consensus 28 ~~~~~s~~~~~~~l~~~~iG~GiL~LP~~~~~~G~~~g~i~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~l~ 107 (326)
.+++.+.++.++..+++++|+|++.+|....++|.. +++.+++.++........+.|...+.| +.....+..
T Consensus 6 ~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~-~~~~~li~~~~~~~~a~~~~el~~~~p-------~~Gg~y~~~ 77 (445)
T 3l1l_A 6 DAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGI-AIYGWLVTIIGALGLSMVYAKMSFLDP-------SPGGSYAYA 77 (445)
T ss_dssp -CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTH-HHHHHHHHHHHHHHHHHHHHHHHHHCC-------CTTTHHHHH
T ss_pred CCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHccCC-------CCCCchhhH
Confidence 567899999999999999999999999988888864 688899999999999999999999885 344566678
Q ss_pred HHhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhhccCCchhHHHH-HHHHHHHHHhhhhcCCchhhHHHHHHH
Q 020421 108 YKCMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKSYTSLTYRSFIF-LVVPVQILLSWINSLSALAPFSIFADI 186 (326)
Q Consensus 108 ~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~~~~~~~~~~~~-i~~~~~~pl~~~~~l~~l~~~s~~~~~ 186 (326)
++.+||+.+++..+..++........+....++++..+++.... ....+.+ +..++.+.....++.+...+++.....
T Consensus 78 ~~~~G~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~ 156 (445)
T 3l1l_A 78 RRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD-PWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATV 156 (445)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGS-HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HhHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccccc-cHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 99999999999999999988888888888888888776664211 1112222 333333344555677777777776666
Q ss_pred HHHHHHHHHHHhhhhhhhcCCCCCcccc-cccccccchhhHHHHHHHhhccccchhchHhhhhccc-chHHHHHHHHHHH
Q 020421 187 CNVLAMTLVVKEDVQKILGGEFSFSDRK-AVSSNIRGLPFAGGMAVFCFEGFGMTFALESSMRERG-RFSKLLAQAFTGI 264 (326)
Q Consensus 187 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~-~~~~~~~~~~~~~ 264 (326)
..+..++.++...+.....+ ...+..+ ....++.++..++...+|+|.|.+......+|+|||+ +.+|++..+..++
T Consensus 157 ~~i~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~ 235 (445)
T 3l1l_A 157 LALIPIVGIAVFGWFWFRGE-TYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIA 235 (445)
T ss_dssp HHHHHHHHHHHTTSTTCCCC-CCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChh-hcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHH
Confidence 65555554444443321111 0001111 1011366788999999999999999999999999985 5999999999999
Q ss_pred HHHHHHHHhHhhhhcCCC
Q 020421 265 TLVYVMFGFFGFMAYGDD 282 (326)
Q Consensus 265 ~~~y~~~~~~gy~~fG~~ 282 (326)
+++|+...+......+.+
T Consensus 236 ~~~y~~~~~~~~~~~~~~ 253 (445)
T 3l1l_A 236 AVCYVLSTTAIMGMIPNA 253 (445)
T ss_dssp HHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhcCCHH
Confidence 999999998877776543
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.67 E-value=6.5e-15 Score=137.20 Aligned_cols=239 Identities=11% Similarity=0.102 Sum_probs=173.7
Q ss_pred CCCCCCHHHHHHHHHHhhhhhhcchhHH-HHHhhcHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcCcchhh
Q 020421 28 VTGTASAAQTLGNIIVSIVGTGVLGLPF-AFRVAGWLAGCLGVMIAGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYGDL 106 (326)
Q Consensus 28 ~~~~~s~~~~~~~l~~~~iG~GiL~LP~-~~~~~G~~~g~i~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~l 106 (326)
++++.+.++.++..+++++|+|++.+|. +...+|. ..++.+++.+++.......+.|...++| +.....+.
T Consensus 4 ~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~-~~~~~~li~~~~~~~~~~~~~el~~~~P-------~~Gg~y~~ 75 (444)
T 3gia_A 4 KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGR-NLPETFILSGIYALLVAYSYTKLGAKIV-------SNAGPIAF 75 (444)
T ss_dssp CCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHHHHHHTTCC-------CTTTHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhhCC-------CCCcHHHh
Confidence 4678999999999999999999998875 4555666 6788899999999999999999999885 33445567
Q ss_pred HHHhhhhhh-HHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhhccCCchhHHH---HHHHHHHHHHhhhhcCCchhhHHH
Q 020421 107 GYKCMGKAG-RFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKSYTSLTYRSFI---FLVVPVQILLSWINSLSALAPFSI 182 (326)
Q Consensus 107 ~~~~~G~~~-~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~~~~~~~~~~~---~i~~~~~~pl~~~~~l~~l~~~s~ 182 (326)
.++.+||+. .....+..++........+....++++..+++.. ....+. .+...+++.....++.+...+++.
T Consensus 76 ~~~~~G~~~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~~~ 152 (444)
T 3gia_A 76 IHKAIGDNIITGALSILLWMSYVISIALFAKGFAGYFLPLINAP---INTFNIAITEIGIVAFFTALNFFGSKAVGRAEF 152 (444)
T ss_dssp HHHHHCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC---CCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CchHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 899999962 3344567777777778888888999998887652 222221 133333334455567777777777
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhcCCCCCcccccccccccchhhHHHHHHHhhccccchhchHhhhhcccc-hHHHHHHHH
Q 020421 183 FADICNVLAMTLVVKEDVQKILGGEFSFSDRKAVSSNIRGLPFAGGMAVFCFEGFGMTFALESSMRERGR-FSKLLAQAF 261 (326)
Q Consensus 183 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~~-~~~~~~~~~ 261 (326)
......+..++.++...+... + ..+.. ....+.++.++..++...+|+|.|.+......+|+|||+| .+|++..+.
T Consensus 153 ~~~~~~i~~~~~~ii~~~~~~-~-~~~~~-~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~ 229 (444)
T 3gia_A 153 FIVLVKLLILGLFIFAGLITI-H-PSYVI-PDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISI 229 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-C-GGGTS-CCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHc-C-hhhcC-CCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHH
Confidence 766665555554444444332 1 11111 1112224667888899999999999999999999999966 999999999
Q ss_pred HHHHHHHHHHHhHhhhhcC
Q 020421 262 TGITLVYVMFGFFGFMAYG 280 (326)
Q Consensus 262 ~~~~~~y~~~~~~gy~~fG 280 (326)
.+++++|+...+......+
T Consensus 230 ~~~~~~y~~~~~~~~~~~~ 248 (444)
T 3gia_A 230 LIVMFVYVGVAISAIGNLP 248 (444)
T ss_dssp HHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHhCCC
Confidence 9999999998887666654
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.47 E-value=2.8e-11 Score=114.56 Aligned_cols=244 Identities=11% Similarity=0.066 Sum_probs=153.0
Q ss_pred CCCCCCCHHHHHHHHHHhhhhhhcchhHHHHHhhcHhhHHHHHHHHHHHHH-HHHHHHHHHHH--HhccccCCCCCcCcc
Q 020421 27 RVTGTASAAQTLGNIIVSIVGTGVLGLPFAFRVAGWLAGCLGVMIAGLSTY-YCMLLLIQCRD--KLVSEDTSSTETKTY 103 (326)
Q Consensus 27 ~~~~~~s~~~~~~~l~~~~iG~GiL~LP~~~~~~G~~~g~i~~i~~~~~~~-~~~~~l~~~~~--~~~~~~~~~~~~~~y 103 (326)
+.+++.+.++.++..++.++| +..+|. ....|... ++..++.+.+.. .....+.|... ..| ....
T Consensus 8 ~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~-~~~~~i~~~~~~l~~al~~ael~s~~~~P--------~GG~ 75 (511)
T 4djk_A 8 GKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSL-VFFLLLGGILWFIPVGLCAAEMATVDGWE--------EGGV 75 (511)
T ss_dssp ----CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHH-HHHHHHHHHHTHHHHHHHHHHHHTTSCC-----------CH
T ss_pred ccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHH-HHHHHHHHHHHHHHHHHHHHHHcccccCC--------CCCh
Confidence 356789999999999999986 567775 45666533 444444444433 36777788887 763 3455
Q ss_pred hhhHHHhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHh--hhccCCchhHHHH-HHHHHHHHHhhhhcCCchhhH
Q 020421 104 GDLGYKCMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIF--KSYTSLTYRSFIF-LVVPVQILLSWINSLSALAPF 180 (326)
Q Consensus 104 ~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~--~~~~~~~~~~~~~-i~~~~~~pl~~~~~l~~l~~~ 180 (326)
...+++.+||+.+++..+..++........+....++.+..++ +.........+.+ +..++++.....+..+...++
T Consensus 76 y~~~~~~~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~in~~g~~~~~~~ 155 (511)
T 4djk_A 76 FAWVSNTLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARI 155 (511)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCGGGTSCSSHHHHHHHHHHHHHHHHHHTCSSSHHHH
T ss_pred hhhHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCcHHHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 5668999999999999999999888888888888888776553 3321111112222 333333445556677777777
Q ss_pred HHHHHHH-HHHHHHHHHHhhhhhhhcCCCC---Ccccccccc-cccchhhHHHHHHHhhccccchhchHhhhhcccc-hH
Q 020421 181 SIFADIC-NVLAMTLVVKEDVQKILGGEFS---FSDRKAVSS-NIRGLPFAGGMAVFCFEGFGMTFALESSMRERGR-FS 254 (326)
Q Consensus 181 s~~~~~~-~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~faf~~~~~i~~i~~~m~~p~~-~~ 254 (326)
+...... .+..+++++..++.....+.+. .+..+.++. ...+...++...+|+|.|.+......+|+|||+| .+
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip 235 (511)
T 4djk_A 156 AKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYP 235 (511)
T ss_dssp THHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchh
Confidence 7665443 2222222222222211111110 010111111 1224556678899999999999999999999865 99
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhcCCC
Q 020421 255 KLLAQAFTGITLVYVMFGFFGFMAYGDD 282 (326)
Q Consensus 255 ~~~~~~~~~~~~~y~~~~~~gy~~fG~~ 282 (326)
|++..++.+++++|+...+......+++
T Consensus 236 ~ai~~~~~~~~~~y~~~~~~~~~~~~~~ 263 (511)
T 4djk_A 236 LAMLLLMVAAICLSSVGGLSIAMVIPGN 263 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeecCHh
Confidence 9999999999999999998777766543
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=98.82 E-value=1.4e-06 Score=81.91 Aligned_cols=250 Identities=6% Similarity=-0.073 Sum_probs=146.9
Q ss_pred CCCCHHHHHHHHHHhhhhhhcchhHHHHHh-hcHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcCcchhhHH
Q 020421 30 GTASAAQTLGNIIVSIVGTGVLGLPFAFRV-AGWLAGCLGVMIAGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYGDLGY 108 (326)
Q Consensus 30 ~~~s~~~~~~~l~~~~iG~GiL~LP~~~~~-~G~~~g~i~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~l~~ 108 (326)
|+.++++-+..-++..++.+-+.+...+.. .++..+++..++..++......+......+. ..++.++.|
T Consensus 25 R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~---------Gl~~~v~~R 95 (501)
T 2jln_A 25 RSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRW---------GINFTVAAR 95 (501)
T ss_dssp CCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHH---------CCCHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhc---------CCChhhhhH
Confidence 446888888777887777777766654443 4456666666666665555554444444443 336899999
Q ss_pred HhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhhccCCch-hHHHHHHHHHHHHHhhhhcCCchhhHHHHHHHH
Q 020421 109 KCMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKSYTSLTY-RSFIFLVVPVQILLSWINSLSALAPFSIFADIC 187 (326)
Q Consensus 109 ~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~~~~~~~-~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~~~ 187 (326)
..||+++..+..+...+..+|-........++.+..++....+.+. ....+++.++.++.. ....+.+++++......
T Consensus 96 ~~FG~~Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~g~~~~~v~~~i~~~l~~~~~-~~G~~~i~~~~~~~~p~ 174 (501)
T 2jln_A 96 MPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTT-FYGITFIRWMNVFASPV 174 (501)
T ss_dssp TTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHHHH
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHH
Confidence 9999999999999999999998888888889998887754322332 223334555555555 45677777777777666
Q ss_pred HHHHHHHHHHhhhhhhhcCCCCCcccccccccccchhhHHHHH-HHhhccccchhchHhhhhcccc------------hH
Q 020421 188 NVLAMTLVVKEDVQKILGGEFSFSDRKAVSSNIRGLPFAGGMA-VFCFEGFGMTFALESSMRERGR------------FS 254 (326)
Q Consensus 188 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~faf~~~~~i~~i~~~m~~p~~------------~~ 254 (326)
.++..+.+.+..+.+......+..+.+. +.....+..++... .+.-....+.+.+.+.+|++++ ..
T Consensus 175 ~~i~~i~~~~~~l~~~g~~~~~~~~~~~-~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~~ 253 (501)
T 2jln_A 175 LLAMGVYMVYLMLDGADVSLGEVMSMGG-ENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYA 253 (501)
T ss_dssp HHHHHHHHHHHHHHHHTCCHHHHTTCCC-SSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcchhhhccCC-ccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchHH
Confidence 5555554444443331000000001111 01233444444332 2222334667888999988766 33
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhhhcCCCchhhHhhc
Q 020421 255 KLLAQAFTGITLVYVMFGFFGFMAYGDDTKDIVTLN 290 (326)
Q Consensus 255 ~~~~~~~~~~~~~y~~~~~~gy~~fG~~~~~~il~n 290 (326)
+....+..+...+...+|...-...+.+....++..
T Consensus 254 ~g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~ 289 (501)
T 2jln_A 254 TAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITE 289 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHH
Confidence 344455555555555666544333443333444444
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=97.78 E-value=0.0063 Score=57.44 Aligned_cols=159 Identities=11% Similarity=0.009 Sum_probs=92.8
Q ss_pred CCCCCCHHHHHHHHHHhhhhhh-cchhHHHHHhhcHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcCcchhh
Q 020421 28 VTGTASAAQTLGNIIVSIVGTG-VLGLPFAFRVAGWLAGCLGVMIAGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYGDL 106 (326)
Q Consensus 28 ~~~~~s~~~~~~~l~~~~iG~G-iL~LP~~~~~~G~~~g~i~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~l 106 (326)
..|+.+++...+.+..+.+++. .+.+|...+..|+......... ++........+.....+ .+..|..|+
T Consensus 18 aGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~~-~~~~~i~~~~~~p~~~~--------~~~~T~~e~ 88 (530)
T 3dh4_A 18 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIE--------KGIYTIPEF 88 (530)
T ss_dssp CCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHHH-HHHHHHHHHHTHHHHHH--------TTCCSHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH-HHHHHHHHHHHHHHHHH--------cCCccHHHH
Confidence 3567899999999998888877 5579998888887543211111 11111122222222333 477899999
Q ss_pred HHHhhhhhhHHHHHHHHHH-HHhhhHHHHHHHHHHhHHHHhhhccCCchhHHHHHHHHHHHHHhhhhcCCchhhHHHHHH
Q 020421 107 GYKCMGKAGRFLTEFLIFT-SQCGGSVAYLVFIGQNLFSIFKSYTSLTYRSFIFLVVPVQILLSWINSLSALAPFSIFAD 185 (326)
Q Consensus 107 ~~~~~G~~~~~~~~~~~~~-~~~g~~~~y~i~~~~~l~~l~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~ 185 (326)
-++-||++.+.+..+...+ +.+..+.+.+...+..++.+++ .+...-.++..++.........++...+...+-.
T Consensus 89 l~~Rfg~~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G----i~~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~ 164 (530)
T 3dh4_A 89 VEKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG----IPLMYSILGLALFALVYSIYGGLSAVVWTDVIQV 164 (530)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHTTC------CCSHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9999999988777665443 2333333333344545555543 4555445566666666677789999988888887
Q ss_pred HHHHHHHHHHHHhh
Q 020421 186 ICNVLAMTLVVKED 199 (326)
Q Consensus 186 ~~~~~~~~~i~~~~ 199 (326)
+.+++..+++.+..
T Consensus 165 ~im~~g~~~v~~~~ 178 (530)
T 3dh4_A 165 FFLVLGGFMTTYMA 178 (530)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77666554444333
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.39 E-value=0.05 Score=52.02 Aligned_cols=156 Identities=12% Similarity=0.011 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHHhhhhhhc-chhHHHHHhhcHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCcCcchhhH
Q 020421 29 TGTASAAQTLGNIIVSIVGTGV-LGLPFAFRVAGWLAGCLGVMIAGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYGDLG 107 (326)
Q Consensus 29 ~~~~s~~~~~~~l~~~~iG~Gi-L~LP~~~~~~G~~~g~i~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~l~ 107 (326)
.|+.+++.....+..+.+++.. +..|...++.|+......+.. ++........+..-..+ .+..|..|.-
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~~-~~~~~~~~~~~~p~~~r--------~~~~T~~e~l 118 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWMS-AITLIIVGKYFLPIFIE--------KGIYTIPEFV 118 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHHH-HHHHHHHHHTHHHHHHH--------TTCCSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHHH-HHHHHHHHHHHHHHHHh--------CCCCCcHHHH
Confidence 4567899888888888887774 578988888887532221111 11111112222222222 4778999999
Q ss_pred HHhhhhhhHHHHHHHHHH-HHhhhHHHHHHHHHHhHHHHhhhccCCchhHHHHHHHHHHHHHhhhhcCCchhhHHHHHHH
Q 020421 108 YKCMGKAGRFLTEFLIFT-SQCGGSVAYLVFIGQNLFSIFKSYTSLTYRSFIFLVVPVQILLSWINSLSALAPFSIFADI 186 (326)
Q Consensus 108 ~~~~G~~~~~~~~~~~~~-~~~g~~~~y~i~~~~~l~~l~~~~~~~~~~~~~~i~~~~~~pl~~~~~l~~l~~~s~~~~~ 186 (326)
++-||++.+.+..+...+ ..+......+...+..++.+++ .+.....++..++.........++...+...+-.+
T Consensus 119 ~~Rfg~~~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~G----i~~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~i 194 (593)
T 2xq2_A 119 EKRFNKKLKTILAVFWISLYIFVNLTSVLYLGGLALETILG----IPLMYSILGLALFALVYSIYGGLSAVVWTDVIQVF 194 (593)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHHHTTC---CCHHHHHHHH
T ss_pred HHHccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----ccHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 999999887777655443 3333333444445555666554 45544444555555666777889988888887776
Q ss_pred HHHHHHHHHHH
Q 020421 187 CNVLAMTLVVK 197 (326)
Q Consensus 187 ~~~~~~~~i~~ 197 (326)
.++...+++.+
T Consensus 195 iml~~~l~v~~ 205 (593)
T 2xq2_A 195 FLVLGGFMTTY 205 (593)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 66555444433
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=92.99 E-value=5.8 Score=36.95 Aligned_cols=221 Identities=13% Similarity=0.025 Sum_probs=108.0
Q ss_pred CCCCHHHHHHHHHHhhhhhh-cchhHHHHHhhcHhhHHHHHH----HHHHHHHHHHHHHHHHHHHhccccCCCCCcCcch
Q 020421 30 GTASAAQTLGNIIVSIVGTG-VLGLPFAFRVAGWLAGCLGVM----IAGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYG 104 (326)
Q Consensus 30 ~~~s~~~~~~~l~~~~iG~G-iL~LP~~~~~~G~~~g~i~~i----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~ 104 (326)
+=.|...-....+++.+|.| +.-.||...+-|...-++..+ +.++-..+.-..+.|-..+. .+.+....|.
T Consensus 7 ~W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~----~r~~~i~a~~ 82 (519)
T 2a65_A 7 HWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQ----GHGTTPAIFY 82 (519)
T ss_dssp CCSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT----TCCSHHHHHH
T ss_pred cCCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhc----cCCCHHHHHH
Confidence 34678888999999999999 778999888877544344333 33333333333333321111 1002233343
Q ss_pred hhHHHhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhhc----------------------------cCCc---
Q 020421 105 DLGYKCMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKSY----------------------------TSLT--- 153 (326)
Q Consensus 105 ~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~~----------------------------~~~~--- 153 (326)
+++++ +....+.+...+..+..++-|.+..+-.+..++... .+.+
T Consensus 83 ~l~~~----~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~ 158 (519)
T 2a65_A 83 LLWRN----RFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGD 158 (519)
T ss_dssp HHSCS----HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSS
T ss_pred HhcCC----cCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCc
Confidence 33321 111112222222223233333333332222221111 0000
Q ss_pred -----hhHHHH---HHHHHHHHHhhhhcC-CchhhHHHHHHHHHHHHHHHHHHhhhhhhhcCCCCCc-----ccccccc-
Q 020421 154 -----YRSFIF---LVVPVQILLSWINSL-SALAPFSIFADICNVLAMTLVVKEDVQKILGGEFSFS-----DRKAVSS- 218 (326)
Q Consensus 154 -----~~~~~~---i~~~~~~pl~~~~~l-~~l~~~s~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~- 218 (326)
.++-.+ ....++.-++..|.+ +...+++.+...+..+.+++++++++.-.-+.....+ -.|.+..
T Consensus 159 ~~~g~~~~~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L 238 (519)
T 2a65_A 159 EPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKL 238 (519)
T ss_dssp SCBCCCCHHHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTST
T ss_pred ccccCccHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHh
Confidence 011112 222223345677888 5577888777666666666666666553210000000 0111110
Q ss_pred -cccchhhHHHHHHHhhc-cccchhchHhhhhcccchHHHHH
Q 020421 219 -NIRGLPFAGGMAVFCFE-GFGMTFALESSMRERGRFSKLLA 258 (326)
Q Consensus 219 -~~~~~~~~~~~~~faf~-~~~~i~~i~~~m~~p~~~~~~~~ 258 (326)
+..-...|.+-++|+.. |...+..+.+.+|++++..+...
T Consensus 239 ~~~~vw~~A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~ 280 (519)
T 2a65_A 239 KDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGL 280 (519)
T ss_dssp TCHHHHHHHHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHH
T ss_pred CCHHHHHHHHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHH
Confidence 12346788888999984 56777777778887777665433
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=84.42 E-value=21 Score=33.27 Aligned_cols=121 Identities=11% Similarity=0.045 Sum_probs=67.0
Q ss_pred CCCCCCHHHHHHHHHHhhhhhhcchh----HHHHHh--------hcHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 020421 28 VTGTASAAQTLGNIIVSIVGTGVLGL----PFAFRV--------AGWLAGCLGVMIAGLSTYYCMLLLIQCRDKLVS-ED 94 (326)
Q Consensus 28 ~~~~~s~~~~~~~l~~~~iG~GiL~L----P~~~~~--------~G~~~g~i~~i~~~~~~~~~~~~l~~~~~~~~~-~~ 94 (326)
.+++.|.++-+..++.+-+|+|++.- |..-.+ ...-.+....++-+.+.-++.+.+.-..-.+-. ++
T Consensus 92 ~kPefS~~sW~aMlF~AGmGiGl~FwgvaEPl~h~~~pP~~~~~eAa~~Am~~t~fHWG~~~WAiYav~glalaY~~yrk 171 (539)
T 4ain_A 92 EAPEFRTVSWISMMFAAGMGIGLMFYGTTEPLTFYRNGVPGHDEHNVGVAMSTTMFHWTLHPWAIYAIVGLAIAYSTFRV 171 (539)
T ss_dssp CCCSSCHHHHHHHHHTTSCCTHHHHHHHHHHHHHHHTCCTTSCSSCHHHHHHHHHHHHSHHHHHHHHHHHHHHHCCCCCT
T ss_pred CCCCCcchHHHHHHHHHhhcchheeehhhhhHHHhcCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhcC
Confidence 46778999999999999999998854 322111 112234555556555555555555444433322 11
Q ss_pred CCC--CCcCcchhhHHH-hhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhhc
Q 020421 95 TSS--TETKTYGDLGYK-CMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKSY 149 (326)
Q Consensus 95 ~~~--~~~~~y~~l~~~-~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~~ 149 (326)
+.+ -+..-|+=++++ ..|+.| .++|+.-.+.......+-+-+....++.-+++.
T Consensus 172 ~~pl~iss~l~PllG~r~~~G~~G-~~IDilav~atv~GvatSLGlg~~Qi~~Gl~~l 228 (539)
T 4ain_A 172 GRKQLLSSAFVPLIGEKGAEGWLG-KLIDILAIIATVFGTACSLGLGALQIGAGLSAA 228 (539)
T ss_dssp CCCSCTTGGGHHHHHHHHTTSHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHhHhhcCCCccCCcch-hhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHh
Confidence 111 122223444555 555554 577777776655555555555555555544444
No 9
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=69.53 E-value=71 Score=29.52 Aligned_cols=157 Identities=8% Similarity=-0.085 Sum_probs=74.7
Q ss_pred CCCCCCHHHHHHHHHHhhhhhhcchh----HHH-HHh------hc----HhhHHHHHHHHHHHHHHHHHHHH---HHHHH
Q 020421 28 VTGTASAAQTLGNIIVSIVGTGVLGL----PFA-FRV------AG----WLAGCLGVMIAGLSTYYCMLLLI---QCRDK 89 (326)
Q Consensus 28 ~~~~~s~~~~~~~l~~~~iG~GiL~L----P~~-~~~------~G----~~~g~i~~i~~~~~~~~~~~~l~---~~~~~ 89 (326)
.+++.|.++-+..++.+-+|.|++.- |.. +.+ .+ .-.+....++-+.+..++.+.+. -+.-.
T Consensus 87 ~kPefs~~sW~aMlF~aGmGiGl~fwgvaEP~~h~~~pP~~~~~~s~eAa~~Am~~tffHWG~~~WaiYal~~lalayf~ 166 (509)
T 2wsw_A 87 EKPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISSPPFGMEGYSAPAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFF 166 (509)
T ss_dssp SCCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHSCSTTCCTTCHHHHHHHHHHHHHHTSHHHHHTTHHHHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHhhhhHHhhhhhhhhHHHccCCCCCCCCCcHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 46678999999999999999998865 322 221 11 11223333343333333333333 23333
Q ss_pred hccc-cCCCCCcCcchhhH-HHhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhhccCCc--hhHHH-H-HHHH
Q 020421 90 LVSE-DTSSTETKTYGDLG-YKCMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKSYTSLT--YRSFI-F-LVVP 163 (326)
Q Consensus 90 ~~~~-~~~~~~~~~y~~l~-~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~~~~~~--~~~~~-~-i~~~ 163 (326)
++++ ++-.-+..-|+-++ ++..|+.|+ ++|+.-.+........-+-+....++.-+++..+.. ..... + +...
T Consensus 167 y~r~~~pl~iss~l~PllG~~r~~G~~G~-~IDilav~at~~G~atsLGlg~~qi~~Gl~~lfGi~~~~~~qi~ii~vit 245 (509)
T 2wsw_A 167 FVRKMEVIRPSSTLVPLVGEKHVNGLFGT-VVDNFYLVALILAMGTSLGLATPLVTECIQYLFGIPHTLQLDAIIISCWI 245 (509)
T ss_dssp HTSCCCCCSGGGGCHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_pred HHcCCCCcchHHHhHhhcCCcccCCchhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccHHHHHHHHHHH
Confidence 3222 11112333344456 566666555 666665555444444444444444444333332222 22222 2 2222
Q ss_pred HHHHHhhhhcC-CchhhHHHHHH
Q 020421 164 VQILLSWINSL-SALAPFSIFAD 185 (326)
Q Consensus 164 ~~~pl~~~~~l-~~l~~~s~~~~ 185 (326)
++...+....+ |..+++|.+-.
T Consensus 246 ~~~~~Sa~sGl~kGIk~LS~~N~ 268 (509)
T 2wsw_A 246 LLNAICVAFGLQKGVKIASDVRT 268 (509)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHH
Confidence 33345555555 33555555443
No 10
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=41.99 E-value=1.8e+02 Score=25.60 Aligned_cols=48 Identities=15% Similarity=0.057 Sum_probs=37.7
Q ss_pred CcchhhHHHhhhhhhHHHHHHHHHHHHhhhHHHHHHHHHHhHHHHhhh
Q 020421 101 KTYGDLGYKCMGKAGRFLTEFLIFTSQCGGSVAYLVFIGQNLFSIFKS 148 (326)
Q Consensus 101 ~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~i~~~~~l~~l~~~ 148 (326)
....++.+..+|+++..+..+...+..++...+.....++.+..+..+
T Consensus 258 ~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~d 305 (444)
T 3gia_A 258 NALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKD 305 (444)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH
T ss_pred hhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 345677888889998888888888888888888887777777766554
No 11
>4hkr_A Calcium release-activated calcium channel protein; ORAI1, eukaryotic membrane protein, membran protein, ION channel, STIM, membrane; 3.35A {Drosophila melanogaster} PDB: 4hks_A
Probab=32.64 E-value=1.9e+02 Score=23.03 Aligned_cols=52 Identities=6% Similarity=0.064 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHHHhccccCCCCCcCcchhhHHHhhhhhhHHHHHHHHHHHHhhhHH
Q 020421 72 AGLSTYYCMLLLIQCRDKLVSEDTSSTETKTYGDLGYKCMGKAGRFLTEFLIFTSQCGGSV 132 (326)
Q Consensus 72 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~y~~l~~~~~G~~~~~~~~~~~~~~~~g~~~ 132 (326)
.++++.|++..++|..-.. ..+|++-.-.+||-.....+...+.-...++|+
T Consensus 33 SALLaGFAMVAmVE~ql~~---------~~~~p~~LLi~fav~Ttllv~vml~AlMIsTcI 84 (214)
T 4hkr_A 33 SALLSGFAMVAMVEVQLDH---------DTNVPPGMLIAFAICTTLLVAVHMLALMISTCI 84 (214)
T ss_dssp HHHHHHHHHHHHHHHC-------------------CHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccceeeEEEEeccC---------CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677888888888876332 124544444455555555555555444555444
Done!