Query 020422
Match_columns 326
No_of_seqs 141 out of 1637
Neff 9.1
Searched_HMMs 46136
Date Fri Mar 29 09:37:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020422.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020422hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3097 Predicted membrane pro 99.9 1.2E-26 2.6E-31 203.5 18.8 312 5-326 3-354 (390)
2 COG2814 AraJ Arabinose efflux 99.9 9.5E-24 2.1E-28 194.2 24.7 257 23-310 8-273 (394)
3 KOG3098 Uncharacterized conser 99.9 7E-24 1.5E-28 198.7 21.6 286 23-324 4-324 (461)
4 TIGR02332 HpaX 4-hydroxyphenyl 99.9 7.1E-23 1.5E-27 194.0 27.0 274 25-310 5-305 (412)
5 PRK10406 alpha-ketoglutarate t 99.9 1.6E-22 3.4E-27 192.7 25.3 231 66-319 70-316 (432)
6 PRK03545 putative arabinose tr 99.9 3.2E-22 7E-27 187.9 26.7 220 64-314 49-273 (390)
7 PRK10642 proline/glycine betai 99.9 8.5E-22 1.8E-26 190.7 25.0 276 27-320 15-324 (490)
8 PRK09705 cynX putative cyanate 99.9 5.6E-22 1.2E-26 186.7 22.7 243 49-321 34-279 (393)
9 PRK10213 nepI ribonucleoside t 99.9 3.4E-21 7.3E-26 181.5 27.8 220 64-314 60-283 (394)
10 PRK12307 putative sialic acid 99.9 2.3E-21 5E-26 183.9 25.1 280 27-322 17-306 (426)
11 KOG2533 Permease of the major 99.9 2.7E-22 5.9E-27 191.6 18.2 280 19-310 31-335 (495)
12 PRK15034 nitrate/nitrite trans 99.9 1.1E-20 2.4E-25 179.2 27.9 268 26-321 32-325 (462)
13 PRK09556 uhpT sugar phosphate 99.9 5.5E-22 1.2E-26 190.8 19.5 262 37-314 38-326 (467)
14 PRK11663 regulatory protein Uh 99.9 5.2E-21 1.1E-25 182.4 25.3 227 65-310 64-305 (434)
15 TIGR00890 2A0111 Oxalate/Forma 99.9 6E-21 1.3E-25 176.8 24.4 249 49-322 28-280 (377)
16 PLN00028 nitrate transmembrane 99.9 9.7E-21 2.1E-25 182.7 26.6 231 65-310 77-314 (476)
17 TIGR00710 efflux_Bcr_CflA drug 99.9 2.5E-20 5.5E-25 173.8 28.2 243 50-319 31-279 (385)
18 KOG1330 Sugar transporter/spin 99.9 9.4E-23 2E-27 187.6 11.3 290 4-310 8-309 (493)
19 PRK10133 L-fucose transporter; 99.9 1.1E-20 2.4E-25 180.3 25.6 291 11-319 9-332 (438)
20 PRK09952 shikimate transporter 99.9 1.3E-20 2.8E-25 180.0 25.8 237 67-320 72-324 (438)
21 PRK11551 putative 3-hydroxyphe 99.9 1.9E-20 4.1E-25 176.5 26.6 233 65-319 56-292 (406)
22 COG2271 UhpC Sugar phosphate p 99.9 2.7E-21 5.7E-26 176.5 19.2 266 33-317 34-325 (448)
23 PRK10091 MFS transport protein 99.9 2.8E-20 6.1E-25 174.4 26.5 261 28-319 3-272 (382)
24 PRK14995 methyl viologen resis 99.9 6.5E-20 1.4E-24 177.8 29.4 276 31-322 9-335 (495)
25 TIGR00900 2A0121 H+ Antiporter 99.9 4E-20 8.6E-25 170.7 26.3 235 65-319 40-284 (365)
26 TIGR00891 2A0112 putative sial 99.9 4.4E-20 9.4E-25 173.1 26.8 280 27-321 11-313 (405)
27 PRK15402 multidrug efflux syst 99.9 9.4E-20 2E-24 172.0 28.5 245 50-320 39-289 (406)
28 TIGR00886 2A0108 nitrite extru 99.9 3.5E-20 7.6E-25 171.9 24.4 276 29-316 2-295 (366)
29 PRK15075 citrate-proton sympor 99.9 2.8E-20 6E-25 177.4 24.0 270 29-319 16-311 (434)
30 PRK15403 multidrug efflux syst 99.9 1.7E-19 3.7E-24 171.0 29.1 236 49-310 41-280 (413)
31 PRK03633 putative MFS family t 99.9 6.3E-20 1.4E-24 171.9 25.5 264 25-321 3-274 (381)
32 PRK11102 bicyclomycin/multidru 99.9 8.5E-20 1.8E-24 170.3 24.5 248 49-320 16-268 (377)
33 TIGR00897 2A0118 polyol permea 99.9 1.8E-19 4E-24 170.0 26.2 237 50-310 39-283 (402)
34 PRK10077 xylE D-xylose transpo 99.9 1.2E-19 2.6E-24 174.8 25.2 249 64-323 60-347 (479)
35 TIGR00893 2A0114 d-galactonate 99.9 3.1E-20 6.8E-25 172.6 19.7 244 50-310 20-277 (399)
36 PRK09874 drug efflux system pr 99.9 2.9E-19 6.3E-24 168.3 26.4 274 18-322 7-298 (408)
37 TIGR00903 2A0129 major facilit 99.9 4E-19 8.8E-24 165.8 26.3 232 49-310 16-249 (368)
38 PRK10473 multidrug efflux syst 99.9 5.3E-19 1.1E-23 166.1 27.2 244 49-320 28-277 (392)
39 TIGR00879 SP MFS transporter, 99.9 4.6E-20 1E-24 176.0 20.3 138 64-217 76-220 (481)
40 PRK03699 putative transporter; 99.9 2.9E-19 6.2E-24 168.3 25.1 261 28-317 7-276 (394)
41 TIGR00711 efflux_EmrB drug res 99.9 5.3E-19 1.2E-23 170.3 27.2 254 51-321 29-330 (485)
42 TIGR00895 2A0115 benzoate tran 99.8 5E-19 1.1E-23 165.3 24.4 233 65-314 58-317 (398)
43 PRK11010 ampG muropeptide tran 99.8 1.3E-18 2.7E-23 168.5 27.9 276 19-318 4-295 (491)
44 PF07690 MFS_1: Major Facilita 99.8 2.3E-19 5E-24 164.9 21.2 227 64-310 37-269 (352)
45 PRK11273 glpT sn-glycerol-3-ph 99.8 7.3E-19 1.6E-23 168.5 24.7 227 65-310 69-315 (452)
46 PRK11195 lysophospholipid tran 99.8 1.4E-18 3.1E-23 163.6 25.7 229 65-319 44-278 (393)
47 TIGR00881 2A0104 phosphoglycer 99.8 1.3E-19 2.8E-24 167.9 17.9 244 50-310 21-278 (379)
48 PRK11043 putative transporter; 99.8 4E-18 8.8E-23 160.6 27.2 232 50-310 32-264 (401)
49 TIGR00894 2A0114euk Na(+)-depe 99.8 4.4E-19 9.6E-24 170.5 20.8 227 65-310 82-323 (465)
50 PRK11652 emrD multidrug resist 99.8 6.2E-18 1.3E-22 159.0 27.5 233 49-310 33-269 (394)
51 PRK12382 putative transporter; 99.8 3.9E-18 8.5E-23 160.2 26.1 154 25-193 12-179 (392)
52 PF05978 UNC-93: Ion channel r 99.8 2.7E-19 5.9E-24 145.3 15.3 141 33-183 1-151 (156)
53 TIGR00885 fucP L-fucose:H+ sym 99.8 7.5E-18 1.6E-22 159.5 27.3 259 30-310 5-295 (410)
54 PRK10504 putative transporter; 99.8 6E-18 1.3E-22 162.8 26.9 278 26-320 8-335 (471)
55 TIGR01299 synapt_SV2 synaptic 99.8 1.6E-18 3.4E-23 173.4 23.3 144 64-218 207-359 (742)
56 PRK10054 putative transporter; 99.8 3.1E-18 6.7E-23 161.4 24.0 267 25-320 4-282 (395)
57 TIGR00887 2A0109 phosphate:H+ 99.8 2.6E-18 5.7E-23 166.8 24.2 143 65-218 62-229 (502)
58 TIGR00712 glpT glycerol-3-phos 99.8 4.1E-18 8.9E-23 162.7 24.5 230 63-310 65-313 (438)
59 TIGR00892 2A0113 monocarboxyla 99.8 5E-18 1.1E-22 162.9 25.1 243 51-310 46-302 (455)
60 PRK10489 enterobactin exporter 99.8 2.5E-18 5.3E-23 163.0 21.5 230 65-320 58-297 (417)
61 PRK03893 putative sialic acid 99.8 9.1E-18 2E-22 162.4 25.9 154 26-194 18-176 (496)
62 PRK05122 major facilitator sup 99.8 6.9E-18 1.5E-22 158.8 24.2 154 25-193 12-179 (399)
63 TIGR00883 2A0106 metabolite-pr 99.8 1.4E-18 3E-23 161.9 18.9 225 71-316 47-289 (394)
64 TIGR00805 oat sodium-independe 99.8 2E-18 4.4E-23 171.4 20.6 250 49-310 58-393 (633)
65 TIGR00896 CynX cyanate transpo 99.8 5.3E-18 1.1E-22 157.2 22.1 241 50-319 26-270 (355)
66 PRK11646 multidrug resistance 99.8 6E-17 1.3E-21 152.9 28.6 249 31-310 14-269 (400)
67 TIGR00806 rfc RFC reduced fola 99.8 1.9E-16 4.2E-21 148.6 28.9 241 50-310 52-324 (511)
68 PRK08633 2-acyl-glycerophospho 99.8 3.7E-17 8E-22 173.2 25.9 243 65-320 53-307 (1146)
69 TIGR00898 2A0119 cation transp 99.8 1.1E-17 2.5E-22 162.2 20.1 238 63-322 131-395 (505)
70 PRK06814 acylglycerophosphoeth 99.8 6.7E-17 1.5E-21 171.3 27.1 226 64-310 57-287 (1140)
71 KOG2532 Permease of the major 99.8 8.9E-18 1.9E-22 160.2 17.8 223 65-310 79-320 (466)
72 TIGR00902 2A0127 phenyl propri 99.8 1.3E-16 2.9E-21 149.5 25.0 266 29-323 5-281 (382)
73 KOG0569 Permease of the major 99.8 6.8E-17 1.5E-21 153.1 22.3 247 65-325 66-348 (485)
74 TIGR00899 2A0120 sugar efflux 99.8 1.8E-16 4E-21 147.3 24.5 225 66-320 40-273 (375)
75 cd06174 MFS The Major Facilita 99.8 8.1E-17 1.8E-21 147.4 21.8 208 64-322 39-252 (352)
76 TIGR00901 2A0125 AmpG-related 99.8 4.1E-16 9E-21 144.5 25.1 227 76-321 38-284 (356)
77 COG2223 NarK Nitrate/nitrite t 99.8 8.5E-17 1.9E-21 147.2 19.5 261 22-310 8-280 (417)
78 PRK11902 ampG muropeptide tran 99.7 1.3E-15 2.9E-20 143.7 27.5 224 73-319 46-283 (402)
79 PRK11128 putative 3-phenylprop 99.7 4E-16 8.8E-21 146.2 23.3 263 33-323 9-281 (382)
80 TIGR00882 2A0105 oligosacchari 99.7 6.6E-16 1.4E-20 145.4 24.2 271 28-321 2-293 (396)
81 KOG3764 Vesicular amine transp 99.7 1E-17 2.2E-22 151.6 10.6 225 58-310 101-332 (464)
82 PRK09528 lacY galactoside perm 99.7 4.6E-16 1E-20 147.6 22.1 275 28-320 10-300 (420)
83 KOG0254 Predicted transporter 99.7 3.9E-16 8.5E-21 152.0 20.9 245 65-325 95-372 (513)
84 PRK10207 dipeptide/tripeptide 99.7 2.7E-15 5.8E-20 145.1 22.7 180 19-214 5-194 (489)
85 PRK15011 sugar efflux transpor 99.7 4.2E-14 9.2E-19 133.1 26.2 215 71-319 64-289 (393)
86 TIGR00889 2A0110 nucleoside tr 99.7 3E-14 6.6E-19 135.3 24.6 270 31-323 5-292 (418)
87 KOG2504 Monocarboxylate transp 99.7 1.3E-14 2.8E-19 140.1 21.5 263 30-310 45-359 (509)
88 COG0738 FucP Fucose permease [ 99.6 1.9E-13 4E-18 124.8 22.7 239 65-324 54-315 (422)
89 TIGR00792 gph sugar (Glycoside 99.6 2.1E-13 4.7E-18 129.7 21.3 239 65-322 41-297 (437)
90 KOG0255 Synaptic vesicle trans 99.6 1.2E-13 2.6E-18 134.8 19.2 145 55-218 114-259 (521)
91 KOG2615 Permease of the major 99.6 3.3E-14 7.2E-19 128.4 13.6 102 70-182 79-181 (451)
92 TIGR00924 yjdL_sub1_fam amino 99.6 1.4E-12 3E-17 125.9 24.2 138 65-215 54-193 (475)
93 PF05977 MFS_3: Transmembrane 99.6 1.7E-12 3.7E-17 126.0 24.7 231 67-322 53-294 (524)
94 PF06609 TRI12: Fungal trichot 99.6 1.9E-12 4E-17 126.0 24.5 174 17-208 30-211 (599)
95 PF00083 Sugar_tr: Sugar (and 99.5 8.4E-18 1.8E-22 160.8 -13.1 142 64-218 51-196 (451)
96 TIGR02718 sider_RhtX_FptX side 99.5 9.2E-12 2E-16 117.0 27.5 154 151-321 127-283 (390)
97 PRK09584 tppB putative tripept 99.5 4.3E-12 9.2E-17 123.3 25.3 113 74-200 72-187 (500)
98 COG2807 CynX Cyanate permease 99.5 6.9E-12 1.5E-16 113.1 24.1 247 46-321 30-283 (395)
99 PTZ00207 hypothetical protein; 99.5 6.7E-12 1.4E-16 122.7 23.2 129 70-217 72-209 (591)
100 TIGR00788 fbt folate/biopterin 99.4 7.4E-11 1.6E-15 113.7 25.7 243 66-323 68-329 (468)
101 PF05631 DUF791: Protein of un 99.4 1.1E-09 2.4E-14 99.4 28.5 232 58-310 64-304 (354)
102 KOG2563 Permease of the major 99.4 2.8E-10 6E-15 105.5 23.8 223 70-310 90-327 (480)
103 KOG0252 Inorganic phosphate tr 99.4 1.7E-12 3.8E-17 119.9 9.4 108 64-181 89-204 (538)
104 TIGR01301 GPH_sucrose GPH fami 99.4 2.1E-10 4.6E-15 109.9 23.3 144 27-180 3-175 (477)
105 PRK09669 putative symporter Ya 99.4 1E-10 2.2E-15 112.0 20.8 232 67-320 53-302 (444)
106 PRK05122 major facilitator sup 99.3 9.6E-11 2.1E-15 110.3 19.3 137 66-218 256-393 (399)
107 PRK10429 melibiose:sodium symp 99.3 3.3E-10 7.2E-15 109.4 22.8 234 70-320 53-304 (473)
108 TIGR01299 synapt_SV2 synaptic 99.3 7.3E-11 1.6E-15 118.7 18.7 132 70-218 606-738 (742)
109 TIGR00880 2_A_01_02 Multidrug 99.3 7.2E-11 1.6E-15 93.2 14.9 124 71-210 10-134 (141)
110 PRK15011 sugar efflux transpor 99.3 8.5E-10 1.8E-14 103.9 21.3 129 70-215 263-392 (393)
111 TIGR01272 gluP glucose/galacto 99.3 4.8E-10 1E-14 102.3 18.0 194 108-321 7-217 (310)
112 PF01306 LacY_symp: LacY proto 99.2 2.3E-09 5E-14 100.2 22.5 277 25-320 4-298 (412)
113 TIGR00889 2A0110 nucleoside tr 99.2 4E-10 8.7E-15 107.1 17.7 138 70-218 262-407 (418)
114 PRK15462 dipeptide/tripeptide 99.2 5.2E-09 1.1E-13 100.8 25.0 133 65-211 51-186 (493)
115 PRK11551 putative 3-hydroxyphe 99.2 8.1E-10 1.8E-14 104.1 18.9 135 65-214 261-396 (406)
116 PF13347 MFS_2: MFS/sugar tran 99.2 8.4E-11 1.8E-15 112.0 12.2 234 71-324 49-302 (428)
117 PRK12382 putative transporter; 99.2 1E-09 2.2E-14 103.1 18.4 126 70-211 260-386 (392)
118 PF03825 Nuc_H_symport: Nucleo 99.2 1.6E-08 3.5E-13 95.4 24.8 267 33-322 7-283 (400)
119 PRK10642 proline/glycine betai 99.2 3.3E-09 7.1E-14 102.9 20.4 138 66-218 293-434 (490)
120 PRK11462 putative transporter; 99.2 1.7E-08 3.6E-13 97.3 24.6 219 71-314 57-295 (460)
121 TIGR00899 2A0120 sugar efflux 99.2 5.4E-09 1.2E-13 97.1 20.5 127 72-215 248-375 (375)
122 TIGR00902 2A0127 phenyl propri 99.1 4.8E-09 1E-13 98.4 19.6 124 73-214 254-379 (382)
123 PRK09848 glucuronide transport 99.1 3E-08 6.5E-13 95.0 23.1 227 66-321 51-303 (448)
124 TIGR00890 2A0111 Oxalate/Forma 99.1 3E-09 6.4E-14 98.3 15.6 124 66-205 247-373 (377)
125 cd06174 MFS The Major Facilita 99.1 6.6E-09 1.4E-13 94.9 17.7 130 66-211 218-349 (352)
126 PRK09874 drug efflux system pr 99.1 4.1E-09 8.9E-14 99.2 16.7 125 72-212 271-396 (408)
127 PRK03699 putative transporter; 99.1 9.9E-09 2.1E-13 96.6 19.2 134 65-215 247-381 (394)
128 PF11700 ATG22: Vacuole efflux 99.1 1.2E-08 2.7E-13 98.1 19.3 178 25-217 278-471 (477)
129 PRK09528 lacY galactoside perm 99.0 9.1E-09 2E-13 97.7 16.8 135 67-217 270-407 (420)
130 PF11700 ATG22: Vacuole efflux 99.0 2.2E-07 4.8E-12 89.5 24.9 252 65-322 76-359 (477)
131 PRK10489 enterobactin exporter 99.0 3.2E-08 6.9E-13 93.8 18.8 133 70-218 270-404 (417)
132 PRK11010 ampG muropeptide tran 99.0 1.7E-07 3.8E-12 90.9 23.1 131 70-216 270-405 (491)
133 COG2211 MelB Na+/melibiose sym 99.0 2.7E-07 5.8E-12 87.5 22.6 281 24-322 8-312 (467)
134 TIGR00898 2A0119 cation transp 99.0 4.1E-08 8.9E-13 95.4 17.8 129 72-218 368-499 (505)
135 PRK10504 putative transporter; 98.9 4.3E-08 9.3E-13 94.4 17.7 100 73-182 311-414 (471)
136 TIGR00897 2A0118 polyol permea 98.9 5.4E-08 1.2E-12 91.9 18.0 131 66-214 264-401 (402)
137 PRK03633 putative MFS family t 98.9 9.8E-08 2.1E-12 89.4 19.3 123 66-206 242-364 (381)
138 PRK09556 uhpT sugar phosphate 98.9 4.5E-08 9.7E-13 94.4 17.3 174 29-213 259-448 (467)
139 KOG0253 Synaptic vesicle trans 98.9 6.2E-08 1.3E-12 87.9 16.5 136 65-218 119-255 (528)
140 COG2270 Permeases of the major 98.9 2.6E-08 5.6E-13 92.1 14.3 177 25-216 249-431 (438)
141 PRK09705 cynX putative cyanate 98.9 1.3E-07 2.8E-12 89.1 19.4 138 65-218 246-386 (393)
142 PF03209 PUCC: PUCC protein; 98.9 3.5E-07 7.6E-12 84.6 21.0 228 73-323 28-286 (403)
143 PRK03545 putative arabinose tr 98.9 1.6E-07 3.5E-12 88.1 19.5 126 68-211 250-377 (390)
144 KOG2325 Predicted transporter/ 98.9 1.9E-07 4.2E-12 88.7 19.4 191 19-220 24-236 (488)
145 PRK09952 shikimate transporter 98.9 1.5E-07 3.2E-12 90.1 18.8 130 72-215 299-434 (438)
146 TIGR00883 2A0106 metabolite-pr 98.9 6.7E-08 1.5E-12 89.8 14.7 109 65-183 261-375 (394)
147 TIGR00895 2A0115 benzoate tran 98.8 9.1E-08 2E-12 89.2 15.0 105 65-180 291-397 (398)
148 TIGR00893 2A0114 d-galactonate 98.8 3E-07 6.4E-12 85.2 18.3 127 66-209 258-394 (399)
149 PRK11128 putative 3-phenylprop 98.8 5.7E-07 1.2E-11 84.3 19.8 102 71-183 252-355 (382)
150 PF03137 OATP: Organic Anion T 98.8 6.7E-10 1.4E-14 108.4 -0.3 187 112-310 142-368 (539)
151 KOG4686 Predicted sugar transp 98.8 2.6E-07 5.7E-12 81.1 15.7 183 21-215 257-444 (459)
152 TIGR00900 2A0121 H+ Antiporter 98.8 1.5E-07 3.2E-12 86.7 14.4 105 68-182 256-362 (365)
153 TIGR00879 SP MFS transporter, 98.8 7.8E-08 1.7E-12 91.7 12.7 136 65-217 325-474 (481)
154 TIGR00892 2A0113 monocarboxyla 98.8 9.7E-08 2.1E-12 91.8 13.2 126 66-206 283-413 (455)
155 PRK11663 regulatory protein Uh 98.8 6E-07 1.3E-11 85.7 18.4 130 65-210 285-420 (434)
156 KOG2816 Predicted transporter 98.8 1.5E-06 3.2E-11 83.3 20.4 231 73-323 76-319 (463)
157 TIGR00792 gph sugar (Glycoside 98.8 2.8E-07 6.1E-12 87.6 15.7 111 69-182 267-379 (437)
158 KOG3626 Organic anion transpor 98.7 2.6E-07 5.7E-12 91.4 15.2 187 113-310 239-455 (735)
159 PRK11273 glpT sn-glycerol-3-ph 98.7 9.4E-07 2E-11 84.8 18.3 130 70-215 300-436 (452)
160 TIGR00882 2A0105 oligosacchari 98.7 1.2E-06 2.6E-11 82.5 18.3 124 70-209 265-390 (396)
161 TIGR00887 2A0109 phosphate:H+ 98.7 1.7E-07 3.8E-12 91.2 12.8 135 73-218 349-493 (502)
162 PRK09848 glucuronide transport 98.7 3.3E-07 7.2E-12 87.8 14.5 108 72-182 277-387 (448)
163 TIGR00901 2A0125 AmpG-related 98.7 1.6E-07 3.4E-12 87.0 11.8 85 73-167 259-355 (356)
164 TIGR00891 2A0112 putative sial 98.7 2.2E-07 4.7E-12 87.0 12.9 108 66-183 281-390 (405)
165 PRK03893 putative sialic acid 98.7 7E-07 1.5E-11 86.5 16.5 108 66-183 318-428 (496)
166 PF03825 Nuc_H_symport: Nucleo 98.7 2.4E-06 5.1E-11 80.7 19.5 129 77-216 261-398 (400)
167 PRK15402 multidrug efflux syst 98.7 2E-06 4.2E-11 81.2 18.8 102 70-182 262-369 (406)
168 TIGR00711 efflux_EmrB drug res 98.7 5.5E-07 1.2E-11 86.8 15.2 107 66-182 298-409 (485)
169 PRK10077 xylE D-xylose transpo 98.7 1.5E-06 3.3E-11 83.7 18.2 140 68-218 315-462 (479)
170 KOG4686 Predicted sugar transp 98.6 4.1E-09 9E-14 92.3 -0.5 132 41-182 57-197 (459)
171 PRK10054 putative transporter; 98.6 2.8E-06 6E-11 80.2 18.1 98 75-183 260-359 (395)
172 PRK11646 multidrug resistance 98.6 1.3E-06 2.9E-11 82.4 16.0 96 78-183 262-359 (400)
173 PF03092 BT1: BT1 family; Int 98.6 1E-05 2.2E-10 77.4 21.9 232 75-320 40-294 (433)
174 PF13347 MFS_2: MFS/sugar tran 98.6 1.7E-06 3.7E-11 82.4 16.3 152 28-182 225-383 (428)
175 TIGR02718 sider_RhtX_FptX side 98.6 3.7E-06 8E-11 79.0 18.0 120 73-207 258-384 (390)
176 PRK15075 citrate-proton sympor 98.6 4.7E-06 1E-10 79.6 18.8 104 70-183 285-394 (434)
177 COG3104 PTR2 Dipeptide/tripept 98.6 1.7E-06 3.7E-11 81.8 15.1 127 75-215 77-207 (498)
178 PRK12307 putative sialic acid 98.6 2.9E-06 6.4E-11 80.4 17.0 107 66-183 273-383 (426)
179 PRK10406 alpha-ketoglutarate t 98.6 6.2E-06 1.3E-10 78.7 19.3 132 69-216 289-426 (432)
180 PF05977 MFS_3: Transmembrane 98.6 2.7E-06 5.9E-11 83.0 16.8 116 58-183 249-369 (524)
181 TIGR01272 gluP glucose/galacto 98.6 7.8E-06 1.7E-10 74.6 18.6 108 62-182 181-289 (310)
182 TIGR00903 2A0129 major facilit 98.5 3.7E-06 8.1E-11 78.6 16.5 170 28-215 192-366 (368)
183 PRK14995 methyl viologen resis 98.5 2.2E-06 4.7E-11 83.3 15.4 103 70-182 306-412 (495)
184 TIGR00896 CynX cyanate transpo 98.5 4.5E-06 9.8E-11 77.2 16.8 109 65-183 238-348 (355)
185 PF01306 LacY_symp: LacY proto 98.5 1.2E-05 2.6E-10 75.5 19.3 177 26-218 218-405 (412)
186 TIGR00881 2A0104 phosphoglycer 98.5 4E-06 8.6E-11 77.4 16.1 109 65-183 258-372 (379)
187 PRK11102 bicyclomycin/multidru 98.5 8.7E-06 1.9E-10 75.7 17.8 100 67-177 238-343 (377)
188 PF07690 MFS_1: Major Facilita 98.5 2E-06 4.3E-11 78.8 13.3 100 65-174 249-352 (352)
189 PRK11902 ampG muropeptide tran 98.5 9.8E-06 2.1E-10 76.5 17.7 129 72-216 259-392 (402)
190 TIGR00710 efflux_Bcr_CflA drug 98.5 9.1E-06 2E-10 75.6 17.3 100 67-177 250-356 (385)
191 COG2814 AraJ Arabinose efflux 98.5 9.1E-06 2E-10 75.6 16.9 158 37-212 221-384 (394)
192 PRK08633 2-acyl-glycerophospho 98.5 5.5E-06 1.2E-10 88.5 17.4 106 66-181 276-382 (1146)
193 COG2270 Permeases of the major 98.5 2.5E-05 5.5E-10 72.6 18.8 240 66-321 65-327 (438)
194 TIGR00712 glpT glycerol-3-phos 98.4 1.3E-05 2.8E-10 76.6 17.3 135 66-216 294-436 (438)
195 PLN00028 nitrate transmembrane 98.4 4.5E-06 9.7E-11 80.8 14.2 135 65-217 294-436 (476)
196 PRK10091 MFS transport protein 98.4 1.9E-05 4E-10 74.1 17.7 107 66-183 242-350 (382)
197 PRK09669 putative symporter Ya 98.4 7.6E-06 1.6E-10 78.4 15.2 107 73-182 278-387 (444)
198 PRK11043 putative transporter; 98.4 3E-05 6.5E-10 73.0 18.7 100 71-181 250-355 (401)
199 KOG4332 Predicted sugar transp 98.3 7.6E-06 1.7E-10 71.5 11.8 210 75-310 88-308 (454)
200 TIGR00788 fbt folate/biopterin 98.3 1.1E-05 2.4E-10 77.9 14.1 135 71-215 300-447 (468)
201 PRK15034 nitrate/nitrite trans 98.3 3.3E-05 7.2E-10 74.0 16.4 172 27-207 251-447 (462)
202 PRK06814 acylglycerophosphoeth 98.3 1.7E-05 3.6E-10 84.8 15.9 107 65-181 267-394 (1140)
203 PRK11195 lysophospholipid tran 98.3 5.2E-05 1.1E-09 71.5 17.5 105 66-181 248-354 (393)
204 TIGR00769 AAA ADP/ATP carrier 98.3 0.0016 3.5E-08 62.6 27.3 148 24-181 3-189 (472)
205 PRK10429 melibiose:sodium symp 98.3 1.7E-05 3.8E-10 76.6 14.1 109 71-182 278-392 (473)
206 PF01770 Folate_carrier: Reduc 98.3 0.0011 2.3E-08 62.3 24.9 218 75-310 57-311 (412)
207 PRK10473 multidrug efflux syst 98.3 9.1E-05 2E-09 69.5 18.3 98 69-182 249-348 (392)
208 PRK10213 nepI ribonucleoside t 98.3 0.00018 3.9E-09 67.8 20.2 99 73-183 266-366 (394)
209 KOG3762 Predicted transporter 98.2 1.5E-05 3.2E-10 76.0 12.4 130 66-211 413-544 (618)
210 TIGR02332 HpaX 4-hydroxyphenyl 98.2 2.1E-05 4.5E-10 74.6 13.2 107 66-182 286-394 (412)
211 TIGR00894 2A0114euk Na(+)-depe 98.2 6.6E-05 1.4E-09 72.2 16.8 137 65-215 303-451 (465)
212 PRK11652 emrD multidrug resist 98.2 0.00013 2.7E-09 68.6 18.2 61 110-181 298-358 (394)
213 COG2211 MelB Na+/melibiose sym 98.2 0.0001 2.2E-09 70.2 16.8 150 26-182 234-395 (467)
214 COG2223 NarK Nitrate/nitrite t 98.2 3.9E-05 8.4E-10 71.2 13.0 166 25-210 215-397 (417)
215 KOG0253 Synaptic vesicle trans 98.2 2.7E-05 5.8E-10 71.2 11.7 121 73-215 395-520 (528)
216 PRK10133 L-fucose transporter; 98.1 0.00015 3.3E-09 69.4 17.2 105 65-182 301-406 (438)
217 COG0477 ProP Permeases of the 98.1 6.1E-05 1.3E-09 66.3 13.3 117 64-193 44-165 (338)
218 PRK11462 putative transporter; 98.1 9.3E-05 2E-09 71.3 14.9 109 71-182 275-386 (460)
219 KOG0569 Permease of the major 98.0 0.00018 3.9E-09 69.1 15.4 169 31-219 273-460 (485)
220 TIGR00885 fucP L-fucose:H+ sym 98.0 0.00049 1.1E-08 65.3 17.6 105 65-182 275-380 (410)
221 TIGR00924 yjdL_sub1_fam amino 98.0 0.0006 1.3E-08 66.0 18.2 62 109-180 379-440 (475)
222 PRK09584 tppB putative tripept 98.0 0.00013 2.8E-09 71.1 13.5 91 78-178 339-439 (500)
223 PF06813 Nodulin-like: Nodulin 97.9 0.00065 1.4E-08 59.8 16.1 95 76-181 53-155 (250)
224 COG2271 UhpC Sugar phosphate p 97.9 0.0003 6.4E-09 65.6 13.9 169 27-211 251-431 (448)
225 TIGR01301 GPH_sucrose GPH fami 97.9 0.00053 1.1E-08 66.2 16.0 185 22-218 252-476 (477)
226 KOG2504 Monocarboxylate transp 97.8 0.00038 8.1E-09 67.8 13.7 171 29-214 299-476 (509)
227 TIGR00886 2A0108 nitrite extru 97.6 0.0004 8.7E-09 64.1 9.9 87 68-169 270-365 (366)
228 PF03219 TLC: TLC ATP/ADP tran 97.6 0.087 1.9E-06 51.1 27.1 148 25-182 21-205 (491)
229 PRK10207 dipeptide/tripeptide 97.6 0.0013 2.8E-08 64.0 13.2 98 73-180 323-438 (489)
230 KOG3574 Acetyl-CoA transporter 97.5 0.0033 7.1E-08 58.0 14.1 69 25-94 28-103 (510)
231 KOG0255 Synaptic vesicle trans 97.5 0.0074 1.6E-07 59.0 17.3 129 74-219 365-498 (521)
232 KOG0252 Inorganic phosphate tr 97.4 0.00025 5.4E-09 66.7 5.9 134 75-219 364-503 (538)
233 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.036 7.8E-07 55.8 20.9 131 73-211 37-179 (654)
234 PF00083 Sugar_tr: Sugar (and 97.3 1.7E-06 3.6E-11 82.8 -10.5 132 72-220 299-443 (451)
235 COG2807 CynX Cyanate permease 97.3 0.031 6.7E-07 51.5 17.5 115 65-193 249-365 (395)
236 PRK15403 multidrug efflux syst 97.2 0.019 4.1E-07 54.5 16.4 63 110-183 311-373 (413)
237 KOG0254 Predicted transporter 97.0 0.0083 1.8E-07 58.7 12.0 43 62-104 332-374 (513)
238 PF06609 TRI12: Fungal trichot 97.0 0.019 4E-07 56.8 14.1 100 71-180 361-464 (599)
239 KOG2532 Permease of the major 96.9 0.022 4.7E-07 55.0 13.8 175 20-213 248-446 (466)
240 PF02487 CLN3: CLN3 protein; 96.9 0.038 8.1E-07 52.0 14.3 64 107-180 331-394 (402)
241 KOG3764 Vesicular amine transp 96.8 0.011 2.3E-07 55.1 10.0 109 70-183 317-429 (464)
242 PF00854 PTR2: POT family; In 96.3 0.024 5.2E-07 53.0 9.5 110 90-212 2-121 (372)
243 PF12832 MFS_1_like: MFS_1 lik 96.2 0.026 5.6E-07 40.1 6.9 42 278-319 29-72 (77)
244 KOG0637 Sucrose transporter an 96.2 0.14 3.1E-06 48.6 13.5 95 74-178 82-200 (498)
245 PF03209 PUCC: PUCC protein; 96.2 0.15 3.2E-06 47.9 13.6 94 78-181 263-361 (403)
246 PF12832 MFS_1_like: MFS_1 lik 95.7 0.097 2.1E-06 37.1 8.0 66 33-98 5-74 (77)
247 COG0738 FucP Fucose permease [ 95.5 0.58 1.2E-05 43.9 14.4 145 26-183 234-384 (422)
248 KOG2533 Permease of the major 95.5 0.2 4.3E-06 48.7 11.8 35 69-103 319-357 (495)
249 PRK03612 spermidine synthase; 95.1 2.6 5.7E-05 41.4 18.6 29 154-182 142-170 (521)
250 KOG3810 Micronutrient transpor 94.8 0.98 2.1E-05 41.6 13.3 227 80-324 63-315 (433)
251 PF06963 FPN1: Ferroportin1 (F 94.7 4.1 8.9E-05 39.0 19.8 36 275-310 284-319 (432)
252 PRK15462 dipeptide/tripeptide 94.1 3.5 7.6E-05 40.2 16.4 61 110-180 376-437 (493)
253 KOG2816 Predicted transporter 94.0 0.95 2.1E-05 43.7 12.2 100 70-180 288-389 (463)
254 PF02487 CLN3: CLN3 protein; 93.9 4.3 9.3E-05 38.4 16.0 92 75-181 75-167 (402)
255 KOG2615 Permease of the major 93.6 2.6 5.6E-05 39.5 13.6 101 73-183 311-414 (451)
256 PTZ00207 hypothetical protein; 93.1 2.9 6.3E-05 41.7 14.3 90 112-213 453-551 (591)
257 PF03092 BT1: BT1 family; Int 93.1 1.8 3.8E-05 41.5 12.5 129 80-218 276-417 (433)
258 PF05631 DUF791: Protein of un 92.9 0.61 1.3E-05 43.1 8.4 47 278-324 63-111 (354)
259 COG3104 PTR2 Dipeptide/tripept 92.6 3.3 7.2E-05 40.0 13.2 59 110-178 393-451 (498)
260 KOG1479 Nucleoside transporter 91.5 13 0.00027 35.2 15.8 29 286-314 284-314 (406)
261 KOG0637 Sucrose transporter an 91.3 0.85 1.9E-05 43.5 7.6 82 59-140 332-414 (498)
262 PF06779 DUF1228: Protein of u 90.9 1.4 3E-05 31.9 6.8 64 49-112 17-81 (85)
263 TIGR00939 2a57 Equilibrative N 90.6 3.3 7.2E-05 39.7 11.2 59 112-180 373-431 (437)
264 KOG1237 H+/oligopeptide sympor 90.5 10 0.00022 37.8 14.7 125 74-210 88-241 (571)
265 PF06963 FPN1: Ferroportin1 (F 89.7 12 0.00027 35.7 14.1 141 29-176 259-411 (432)
266 PF13000 Acatn: Acetyl-coenzym 89.1 9.5 0.00021 37.1 12.7 74 234-309 263-338 (544)
267 KOG3098 Uncharacterized conser 89.0 23 0.0005 34.2 15.5 76 82-168 305-399 (461)
268 COG3202 ATP/ADP translocase [E 86.0 35 0.00076 33.1 27.1 77 25-101 24-104 (509)
269 KOG2563 Permease of the major 84.0 4.6 9.9E-05 38.6 7.5 140 26-179 264-414 (480)
270 KOG1330 Sugar transporter/spin 84.0 0.66 1.4E-05 44.2 2.0 43 280-322 64-108 (493)
271 PF07672 MFS_Mycoplasma: Mycop 82.5 2.9 6.3E-05 36.9 5.3 28 289-316 146-176 (267)
272 COG4769 Predicted membrane pro 79.9 19 0.00042 29.3 8.6 50 73-127 87-136 (181)
273 TIGR00805 oat sodium-independe 79.5 1.4 3.1E-05 44.3 2.7 43 280-322 64-108 (633)
274 PF06779 DUF1228: Protein of u 76.2 5.9 0.00013 28.6 4.4 45 278-322 21-67 (85)
275 PF02990 EMP70: Endomembrane p 74.7 12 0.00025 36.9 7.5 33 232-267 244-276 (521)
276 KOG1237 H+/oligopeptide sympor 68.1 27 0.00059 34.8 8.4 62 111-182 458-519 (571)
277 KOG3762 Predicted transporter 67.7 5.9 0.00013 38.8 3.5 41 280-320 42-84 (618)
278 KOG2325 Predicted transporter/ 62.0 9.8 0.00021 36.9 3.9 45 279-323 66-113 (488)
279 PF07672 MFS_Mycoplasma: Mycop 59.6 1.1E+02 0.0024 27.2 9.7 59 111-177 204-262 (267)
280 PF01733 Nucleoside_tran: Nucl 59.0 3.5 7.7E-05 37.4 0.4 55 114-178 251-305 (309)
281 KOG3880 Predicted small molecu 52.9 43 0.00093 30.8 6.0 70 99-178 329-399 (409)
282 COG4721 ABC-type cobalt transp 52.9 29 0.00063 28.3 4.5 98 24-128 4-108 (192)
283 PF08035 Op_neuropeptide: Opio 52.5 6.1 0.00013 22.5 0.5 17 1-18 5-21 (31)
284 PF11947 DUF3464: Protein of u 52.0 55 0.0012 26.5 6.0 76 81-169 56-142 (153)
285 TIGR00939 2a57 Equilibrative N 51.7 2.3E+02 0.0049 27.2 17.4 52 110-176 105-156 (437)
286 PF06813 Nodulin-like: Nodulin 43.9 34 0.00075 30.1 4.1 55 267-323 19-77 (250)
287 KOG2887 Membrane protein invol 43.7 1.9E+02 0.004 23.9 10.8 45 81-125 101-148 (175)
288 KOG1582 UDP-galactose transpor 39.3 1.3E+02 0.0028 26.9 6.8 39 7-48 20-62 (367)
289 KOG1479 Nucleoside transporter 37.8 83 0.0018 29.9 5.8 58 110-177 342-399 (406)
290 PRK10692 hypothetical protein; 37.5 69 0.0015 23.1 4.0 46 110-155 37-85 (92)
291 KOG4332 Predicted sugar transp 34.9 23 0.0005 31.9 1.6 42 278-319 66-109 (454)
292 TIGR00926 2A1704 Peptide:H+ sy 34.1 2.9E+02 0.0062 28.2 9.4 76 113-205 567-642 (654)
293 COG2119 Predicted membrane pro 33.4 2.9E+02 0.0063 23.2 8.8 36 70-105 145-180 (190)
294 PF12273 RCR: Chitin synthesis 30.9 28 0.0006 27.2 1.3 13 192-204 1-13 (130)
295 PF10762 DUF2583: Protein of u 29.8 67 0.0014 23.0 2.9 46 110-155 37-85 (89)
296 PF09819 ABC_cobalt: ABC-type 26.3 3.2E+02 0.0069 21.4 9.2 62 63-127 38-99 (129)
297 COG0477 ProP Permeases of the 26.0 94 0.002 26.3 4.0 35 285-319 40-76 (338)
298 PF10797 YhfT: Protein of unkn 25.8 5.5E+02 0.012 24.3 8.8 35 3-40 205-240 (420)
299 PF04018 DUF368: Domain of unk 23.3 4E+02 0.0087 23.6 7.3 26 69-94 90-116 (257)
300 PF07330 DUF1467: Protein of u 22.6 2.1E+02 0.0046 20.6 4.4 33 4-36 26-60 (85)
301 PRK15015 carbon starvation pro 21.0 4.9E+02 0.011 26.6 8.0 36 142-178 73-109 (701)
302 TIGR00806 rfc RFC reduced fola 20.3 8.4E+02 0.018 24.1 10.6 74 66-139 305-381 (511)
303 PF03219 TLC: TLC ATP/ADP tran 20.2 8.2E+02 0.018 23.9 10.3 80 113-197 275-354 (491)
No 1
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.95 E-value=1.2e-26 Score=203.53 Aligned_cols=312 Identities=36% Similarity=0.487 Sum_probs=244.6
Q ss_pred CCCCCCCccccccc--cc-cCccccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHH
Q 020422 5 DSRDEEAPLVADSL--QV-LTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASL 81 (326)
Q Consensus 5 ~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~ 81 (326)
+-+++++|..-++. .+ ...+...||+.+++.++++.|.+|...+++|..++. +.+..+++..|.....++++.+.
T Consensus 3 ~~~~~~~~~~s~~~~~~~~r~~~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~--~lg~~sl~~~y~~l~~s~m~~~~ 80 (390)
T KOG3097|consen 3 LVGAYPNYNESEEEERRYRRKRLGILKNVLILSIAFLLTFTAYLGLQNLQTSVNY--DLGTVSLGALYLSLIDSSMFMPL 80 (390)
T ss_pred ccccccCCCCCCcccchhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc--CcccchhhhhhHHHHHHHHHHHH
Confidence 44667777776644 11 233458999999999999999999999999999986 66667788899999999999999
Q ss_pred HHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC-CCcccchhhHHH
Q 020422 82 VVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK-LHEGTVIGSFNG 160 (326)
Q Consensus 82 l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~-~~~~~~rg~~~g 160 (326)
+.+++|.|++++++...|..+.+.++.|.+.+++++.+..|+|.++.|.+.++|++++.++|+.+++ +..+....+..|
T Consensus 81 ~Ir~~g~K~tm~lav~~Y~lyiA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg 160 (390)
T KOG3097|consen 81 LIRFLGTKWTMVLAVFPYALYIAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFG 160 (390)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhhcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehh
Confidence 9999999999999999999999999999999999999999999999999999999999999988773 444444578889
Q ss_pred HHHHHHHHhHHHHHHHHHHHhc----C---C-C-----C--------C--CCCchhH--------HHHHHHHHHHHHHHH
Q 020422 161 EFWGMFASHQFVGNLITLAVLK----D---D-K-----G--------G--STSGTTL--------LFIVFLGVITLGTIL 209 (326)
Q Consensus 161 i~~~~~~~g~~~G~li~~~l~~----~---~-~-----~--------~--~~~wr~~--------~f~~~~~~~~l~~il 209 (326)
.|+.+++.+...|++++..+.. . . + . + ..+.++. .=.++..+.+++.++
T Consensus 161 ~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~ 240 (390)
T KOG3097|consen 161 EFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLI 240 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHH
Confidence 9999998888888776644321 1 0 0 0 0 0111110 001334444444433
Q ss_pred HHhccCCcc---ccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchH
Q 020422 210 MCFLRKEED---KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGV 286 (326)
Q Consensus 210 ~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 286 (326)
..+.-.... +++. .+.+..+.++-.++.++|+++.++.|...+.|++++|..+.|+..+..|..|.+.+
T Consensus 241 ~~~~~~~l~r~~~~r~--------~~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~i 312 (390)
T KOG3097|consen 241 MLFFLGALKRYGEKRL--------ASVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSRI 312 (390)
T ss_pred HHHHHHHHhhhhhhhh--------hcccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHH
Confidence 333222211 1111 12233455666778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhhcCC
Q 020422 287 GGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHLSLL 326 (326)
Q Consensus 287 g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~~~~ 326 (326)
|.++..+++++++.+.+.|.++.+ |.+....|+++|++++
T Consensus 313 gf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~l~li 354 (390)
T KOG3097|consen 313 GFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVHLLLI 354 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHH
Confidence 999999999999999999999999 9999999999998753
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=9.5e-24 Score=194.16 Aligned_cols=257 Identities=12% Similarity=0.068 Sum_probs=187.2
Q ss_pred ccccchhHHHHHHH-HHHHHHHHHhHH---hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHH
Q 020422 23 PKNYTRDVHILSCA-FLLIFLAYGAAQ---NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (326)
Q Consensus 23 ~~~~~~~~~~l~l~-~~~~~~~~~~~~---~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~ 98 (326)
.++.++.++.++++ |....+.|...+ .++++++.+....-...+++-.+.++++++...+.||+.||++++....+
T Consensus 8 ~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~l 87 (394)
T COG2814 8 RKPMWLALLALALAAFAIGTTEFVPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLAL 87 (394)
T ss_pred cccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH
Confidence 34566777777777 455566666543 55666665533322335555567889999999999999999999999999
Q ss_pred HHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH
Q 020422 99 YWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (326)
Q Consensus 99 ~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~ 177 (326)
+.+..... ++|||..++++|++.|+..|.+|+...++.++.. ||++|+++.++...+.+++.++|..++
T Consensus 88 Fi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lv----------pp~~~~~Aiaiv~~G~tlA~v~GvPLG 157 (394)
T COG2814 88 FIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLV----------PPGKRGRALALVFTGLTLATVLGVPLG 157 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CccchhhHHHHHHHHHHHHHHHhccHH
Confidence 98888764 8999999999999999999999999999999987 999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCchhHHHHHHHHHHHHHHH-HHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHH
Q 020422 178 LAVLKDDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP 256 (326)
Q Consensus 178 ~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 256 (326)
.++-+. .|||.. |++..+++++..+ ++..+| |+..+ ++ ++.+. ++..+.+|+|+.+....
T Consensus 158 t~ig~~-----~GWR~~-F~~ia~l~ll~~~~~~~~lP-~~~~~-~~-------~~~~~----~~~~~~l~~p~v~~~l~ 218 (394)
T COG2814 158 TFLGQL-----FGWRAT-FLAIAVLALLALLLLWKLLP-PSEIS-GS-------LPGPL----RTLLRLLRRPGVLLGLL 218 (394)
T ss_pred HHHHHH-----hhHHHH-HHHHHHHHHHHHHHHHHhCC-CccCC-CC-------CCcch----hHHHHHhcCchHHHHHH
Confidence 888654 589985 5555566655443 345677 11111 11 11122 23347789999887544
Q ss_pred HH--HHhhHHHHHhhhccccccc-ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 257 LF--AYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 257 ~~--~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.. .+.|....| ++..|.+. ..+++.+.+++++..+|++..+|+.++|+++||
T Consensus 219 ~t~l~~~g~F~~f--tYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr 273 (394)
T COG2814 219 ATFLFMTGHFALY--TYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR 273 (394)
T ss_pred HHHHHHcchhhhH--HhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 32 223332222 12223332 235677789999999999999999999999999
No 3
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.92 E-value=7e-24 Score=198.70 Aligned_cols=286 Identities=28% Similarity=0.399 Sum_probs=220.5
Q ss_pred ccccchhHHHHHHHHHHHHHHHHhHHhhhhhhc----------CCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHH
Q 020422 23 PKNYTRDVHILSCAFLLIFLAYGAAQNLETTVN----------TEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNAL 92 (326)
Q Consensus 23 ~~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~----------~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l 92 (326)
.++.++++..++.++++++.++.....+++++. .+++.|..+.+++|..|+++++++|.+.|+.|+|+.+
T Consensus 4 ~~~~~~~v~~lg~g~~~~f~~~~s~~fi~esvi~sv~~~~~g~i~~~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~l 83 (461)
T KOG3098|consen 4 RRFELLNVLMLGFGFLFLFTAYDSQGFIAESVIHSVHERGPGGISAYAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWAL 83 (461)
T ss_pred ccchhheeeehhhhHHHHhHhhhhhHHHHHHHHHHHHhcCCCCcCCCccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHH
Confidence 567899999999999999999998877766652 2467888899999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHH
Q 020422 93 ILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (326)
Q Consensus 93 ~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~ 172 (326)
++|..+|..+..+++.+|-+.++.+.+++|+|.+.+|.+++.|+++++ .+++++++.+++|+.+..+.++
T Consensus 84 v~ga~~y~~f~~gfl~~N~y~~yfssallG~Gaallw~GqG~ylt~~s----------t~~tie~Nisi~Wai~~~~li~ 153 (461)
T KOG3098|consen 84 VIGATCYAAFPLGFLFPNSYYLYFSSALLGFGAALLWTGQGGYLTSNS----------TRETIERNISIFWAIGQSSLII 153 (461)
T ss_pred HHHhHHHHHHHHHHHhcchHHHHHHHHHhhhhHHheecccceehhhcC----------ChhhHHHHHHHHHHHHHHHHHh
Confidence 999999999999998888888889999999999999999999999997 7788999999999999999999
Q ss_pred HHHHHHHHhcCCC-C--CCCCchhH-------------HHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHH
Q 020422 173 GNLITLAVLKDDK-G--GSTSGTTL-------------LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLV 236 (326)
Q Consensus 173 G~li~~~l~~~~~-~--~~~~wr~~-------------~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~ 236 (326)
|+++...+....+ + ...+.+.. ++.++.....++++...++|.+....+++. . +.+.+
T Consensus 154 Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~~-----~-~~~~~ 227 (461)
T KOG3098|consen 154 GGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKSS-----S-ETSFS 227 (461)
T ss_pred hhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhhh-----c-cccHH
Confidence 9988777655432 1 11222211 111111112222222233333222211110 1 13567
Q ss_pred HHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc-ccCc---chHHHHHHHHHHHHHHHHHHhhhhhhh--
Q 020422 237 SLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGV---SGVGGAMAVYGAFDAISLLGFATFFSV-- 310 (326)
Q Consensus 237 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~---~~~g~~~~~~gi~~~~g~~~~G~l~Dr-- 310 (326)
++++...+.+++++++.+.|.++++|+..+|+.+.|+..+... ..+. ...++.+...|+++.++....+.+++|
T Consensus 228 ~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir 307 (461)
T KOG3098|consen 228 ELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIR 307 (461)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhh
Confidence 7788888999999999999999999999999988887665321 2222 245777888899999999999999998
Q ss_pred ---hhhHHhHHHHHhhc
Q 020422 311 ---HSLLVGLPLVFHLS 324 (326)
Q Consensus 311 ---R~~~~~~g~~~~~~ 324 (326)
|++.+..+.++|..
T Consensus 308 ~fg~~~~~~~~~~~~~~ 324 (461)
T KOG3098|consen 308 GFGRKPTVLIGIIIHLI 324 (461)
T ss_pred hcccCcchhHHHHHHHH
Confidence 57888888888764
No 4
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.92 E-value=7.1e-23 Score=194.01 Aligned_cols=274 Identities=12% Similarity=0.083 Sum_probs=181.6
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
..++..+++.+++.+.+..+...+...+.+.++.+.+. ...+..+.++++++++.|++.||+|||+++..+.++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~ 84 (412)
T TIGR02332 5 LFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWG 84 (412)
T ss_pred ehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHH
Confidence 35666777777777767777766655555544443333 23566777889999999999999999999999999988
Q ss_pred HHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHH
Q 020422 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (326)
Q Consensus 101 ~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~ 179 (326)
+..... +++|++.+++.|+++|++.+..+++...++.+++ |+++||+++|+++.+..+|..+|+++++.
T Consensus 85 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~ 154 (412)
T TIGR02332 85 IASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWF----------PAYFRARANALFMIAMPVTMALGLILSGY 154 (412)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877764 7889999999999999999999998888999987 78899999999999999999999999877
Q ss_pred HhcCCC-CCCCCchhHHHHHHHHHHHH-HHHHHHhccCCccccc---ccccc-c-----------cchhh--chHHHHHH
Q 020422 180 VLKDDK-GGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKGE---KETAD-A-----------SVNFY--SYLVSLSK 240 (326)
Q Consensus 180 l~~~~~-~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~~~~~---~~~~~-~-----------~~~~~--~~~~~~~~ 240 (326)
+..... .+..+||+. |.+..+..++ ..+..+++||++++++ +++++ . +++++ .......+
T Consensus 155 l~~~~~~~~~~gwr~~-f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T TIGR02332 155 ILALDGLMALKGWQWL-FLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQR 233 (412)
T ss_pred HHhCCCCCCccchhHH-HHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHH
Confidence 753211 123589974 5454444443 3344567788654321 00000 0 00000 00000011
Q ss_pred HHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc---ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 241 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP---ALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 241 ~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
...+.++++.++.....+++......... .+.|.+..+ +.+....+.......++..+|.++.|+++||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr 305 (412)
T TIGR02332 234 SMLREIFTPAIMLYTLAYFCLTNTLSAIN-IWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDR 305 (412)
T ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcc
Confidence 22333445666655444333332222222 233444332 2334567888888999999999999999999
No 5
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.91 E-value=1.6e-22 Score=192.72 Aligned_cols=231 Identities=10% Similarity=0.048 Sum_probs=146.4
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhh--------HHHHHHHHHhhhhhHHHHhhhhHHH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSW--------YTMVPASLYLGFAASIIWVGEGTYL 136 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~--------~~l~~~r~l~G~g~g~~~~~~~~~l 136 (326)
+..+.+..+++++.|+++||+|||+++..+.+++++.+... +++++ ..+++.|+++|++.|..++...+++
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH
Confidence 34444555889999999999999999999999998888764 56665 3588899999999999999999999
Q ss_pred HHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 020422 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFL 213 (326)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~il~~~l 213 (326)
+|+. |+++||++.++...+...|..+++++...+..... ....+||.. |++..+.+++...+...+
T Consensus 150 ~e~~----------p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~-F~i~~~~~ll~~~~~~~~ 218 (432)
T PRK10406 150 SEVA----------VEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIP-FALGAVLAVVALWLRRQL 218 (432)
T ss_pred HHhC----------CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHH-HHHHHHHHHHHHHHHhcC
Confidence 9997 88999999999888888888877766544432110 013689984 443333333332222334
Q ss_pred cCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHH
Q 020422 214 RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMA 291 (326)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~ 291 (326)
||+++.++++ .++ + ++..+.+|+++.+..............+....+.|.+.. .+.+.++.+....
T Consensus 219 ~e~~~~~~~~------~~~---~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~ 286 (432)
T PRK10406 219 DETSQQETRA------LKE---A---GSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMT 286 (432)
T ss_pred CCCchHHHhh------hcc---c---ccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 4433211100 000 0 112244566766654433222211111111223344332 2445556777777
Q ss_pred HHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 292 VYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 292 ~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
...++..++..+.|+++|| ||+.++.+.
T Consensus 287 i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~ 316 (432)
T PRK10406 287 AALFVFMLIQPLIGALSDKIGRRTSMLCFG 316 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHH
Confidence 7777888889999999999 665544443
No 6
>PRK03545 putative arabinose transporter; Provisional
Probab=99.91 E-value=3.2e-22 Score=187.94 Aligned_cols=220 Identities=13% Similarity=0.050 Sum_probs=154.6
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
..+.....+++++++.|+++||+|||+++..+.+++++.++.. +++|++.+++.|+++|++.+..++...+++.++.
T Consensus 49 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~-- 126 (390)
T PRK03545 49 MLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVA-- 126 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 3455566778889999999999999999999998888877664 7899999999999999999999998888888886
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGE 221 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~~ 221 (326)
|+++|++++|++..+.++|..+|+.++..+.+. .+||+. |++..++.++..++ ...+||+++++
T Consensus 127 --------~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~-----~gw~~~-f~~~~~~~~l~~~~~~~~~~~~~~~~- 191 (390)
T PRK03545 127 --------PAGKKAQALSLLATGTALAMVLGLPLGRVIGQY-----LGWRTT-FLAIGGGALITLLLLIKLLPLLPSEH- 191 (390)
T ss_pred --------ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHH-----hcHHHH-HHHHHHHHHHHHHHHHHhCCCCCCCC-
Confidence 889999999999999999999999998776543 479874 55555555444333 33455532211
Q ss_pred cccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-cccCcchHHHHHHHHHHHHHHH
Q 020422 222 KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAIS 300 (326)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~gi~~~~g 300 (326)
+ .+ .++..+.+|+|+++......+..........+..++.+.+ .+.+.+..+..+...++++.++
T Consensus 192 -~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g 257 (390)
T PRK03545 192 -S---------GS----LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIG 257 (390)
T ss_pred -c---------ch----HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHH
Confidence 1 01 1223356778877654332222111111111222232322 2455667888888899999999
Q ss_pred HHHhhhhhhh--hhhH
Q 020422 301 LLGFATFFSV--HSLL 314 (326)
Q Consensus 301 ~~~~G~l~Dr--R~~~ 314 (326)
+.+.|+++|| ||.+
T Consensus 258 ~~~~g~l~dr~~~~~~ 273 (390)
T PRK03545 258 SVLFSRLGNRHPSGFL 273 (390)
T ss_pred HHHHHHHhhccchhHH
Confidence 9999999999 5543
No 7
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.90 E-value=8.5e-22 Score=190.68 Aligned_cols=276 Identities=11% Similarity=0.023 Sum_probs=167.3
Q ss_pred chhHHHHHHHHHHHHHHHHhHHhh----hhhhcCCCCc--h---hHH-HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHh
Q 020422 27 TRDVHILSCAFLLIFLAYGAAQNL----ETTVNTEGNL--G---TIS-LGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (326)
Q Consensus 27 ~~~~~~l~l~~~~~~~~~~~~~~l----~~~l~~~~~~--g---~~~-~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~ 96 (326)
+|-++...++.++-+..+...+.. .+.+..+.+. . ... .++.++++++++++.|+++||+|||+++.++.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~ 94 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITI 94 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 444555556666655455444333 3333322211 1 111 36667788999999999999999999999999
Q ss_pred HHHHHHHHHh-hhhhhHH--------HHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHH
Q 020422 97 TGYWLFVAAN-LFPSWYT--------MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (326)
Q Consensus 97 ~~~~~~~~~~-~~~~~~~--------l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~ 167 (326)
++++++++.+ ++||+.. ++++|+++|++.|..+++..++++|++ |+++||+..++...+..
T Consensus 95 ~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~----------p~~~Rg~~~~~~~~~~~ 164 (490)
T PRK10642 95 VIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS----------PDRKRGFMGSWLDFGSI 164 (490)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC----------CCCCCcHHHHHHHHHHH
Confidence 9999988865 7888764 788999999999999999999999997 88999999999988888
Q ss_pred HhHHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccccc-cc-cc--cc---chhhchHHH
Q 020422 168 SHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK-ET-AD--AS---VNFYSYLVS 237 (326)
Q Consensus 168 ~g~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~-~~-~~--~~---~~~~~~~~~ 237 (326)
+|..+|+.+...+..... ....+||+. |++....++++.++...+||+++..+. +. ++ .+ +.++.++
T Consensus 165 ~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~-f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~-- 241 (490)
T PRK10642 165 AGFVLGAGVVVLISTIVGEANFLDWGWRIP-FFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSF-- 241 (490)
T ss_pred HHHHHHHHHHHHHHHhcCHHHhcCccHHHH-HHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCH--
Confidence 888888776544432110 113689984 444444444444444567776432110 00 00 00 0001112
Q ss_pred HHHHHHHhhhcchhHHHH-HHHHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hh
Q 020422 238 LSKSITTLLADVRMLLII-PLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HS 312 (326)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~-~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~ 312 (326)
++..+ ++++.+... ...+.......... .+.|.+..+ +.+.+..++......++..++.++.|+++|| ||
T Consensus 242 --~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr 316 (490)
T PRK10642 242 --KEIAT--KHWRSLLTCIGLVIATNVTYYMLL-TYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR 316 (490)
T ss_pred --HHHHH--HhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 22111 122222222 11111111111111 234444322 3444455666677778888999999999999 77
Q ss_pred hHHhHHHH
Q 020422 313 LLVGLPLV 320 (326)
Q Consensus 313 ~~~~~g~~ 320 (326)
+.++.+.+
T Consensus 317 ~~~~~~~~ 324 (490)
T PRK10642 317 PFVILGSV 324 (490)
T ss_pred HHHHHHHH
Confidence 76666553
No 8
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.90 E-value=5.6e-22 Score=186.70 Aligned_cols=243 Identities=11% Similarity=0.032 Sum_probs=162.5
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
.++++++.+..+.....+..+.++++++++.|++.||+|||+++..+..++++..+.. ++++++.++++|+++|++.+.
T Consensus 34 ~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~ 113 (393)
T PRK09705 34 QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGI 113 (393)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHH
Confidence 4455555444444445677778889999999999999999999999999999888765 889999999999999999999
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
.++....++.++. +++|++++|++..+...|..+|+.++..+.... .+||...+ .+....++..
T Consensus 114 ~~~~~~~~~~~~~-----------~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~----~~w~~~~~-~~~~~~~~~~ 177 (393)
T PRK09705 114 IQAVMPSVIKRRF-----------QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHS----ETWYQTLA-WWALPAVVAL 177 (393)
T ss_pred HhhhhhHHHHHHc-----------cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCHHHHHH-HHHHHHHHHH
Confidence 9888877777663 478999999999999999999998887765432 36887432 2333333332
Q ss_pred HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchHH
Q 020422 208 ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVG 287 (326)
Q Consensus 208 il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g 287 (326)
+..+...+++++++++ ++.+ ..+.+++++.+.+.....+..........+.++.+.+.+.+.++.+
T Consensus 178 ~~~~~~~~~~~~~~~~-------~~~~-------~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag 243 (393)
T PRK09705 178 FAWWWQSAREVASSHK-------TTTT-------PVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSG 243 (393)
T ss_pred HHHHHHhcCCCccccC-------CCcC-------CcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhh
Confidence 2222222211111110 0001 0133456666654443333322222222223333333455666788
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 288 GAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 288 ~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
.....++++..+|+++.|++.|| ||+.++.+..+
T Consensus 244 ~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l 279 (393)
T PRK09705 244 SLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVL 279 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHH
Confidence 99999999999999999999999 66655555433
No 9
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.90 E-value=3.4e-21 Score=181.50 Aligned_cols=220 Identities=11% Similarity=0.017 Sum_probs=154.6
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
..+.......+++++.|++.||+|||+++..+.++.++..... +.++++.+++.|+++|++.+..++...+++.++.
T Consensus 60 ~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~-- 137 (394)
T PRK10213 60 SVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLV-- 137 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHc--
Confidence 3455566778889999999999999999999999888766654 6789999999999999999999999888888886
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCccccc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGE 221 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~~~~~~ 221 (326)
|+++|+++.++++.+.++|..+|++++..+.+. .+||+. |.+..++.++..+.. ..+||+++++
T Consensus 138 --------~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~-----~gw~~~-f~~~~~l~~~~~l~~~~~~p~~~~~~- 202 (394)
T PRK10213 138 --------PPRTVPKALSVIFGAVSIALVIAAPLGSFLGEL-----IGWRNV-FNAAAVMGVLCIFWIIKSLPSLPGEP- 202 (394)
T ss_pred --------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cCHHHH-HHHHHHHHHHHHHHHHHHCCCCCccc-
Confidence 889999999999999999999999999888653 479874 444444333322222 2345432111
Q ss_pred cccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccc-ccccCcchHHHHHHHHHHHHHHH
Q 020422 222 KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAIS 300 (326)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~gi~~~~g 300 (326)
+ ++. ++.++.+|+|+++......+............++|.+. ..+.+.+..+..+..++++..++
T Consensus 203 -~------~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig 268 (394)
T PRK10213 203 -S------HQK-------QNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVG 268 (394)
T ss_pred -c------cch-------hHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHH
Confidence 0 000 11235677888876543322222111111222334333 23556667889899999999999
Q ss_pred HHHhhhhhhh-hhhH
Q 020422 301 LLGFATFFSV-HSLL 314 (326)
Q Consensus 301 ~~~~G~l~Dr-R~~~ 314 (326)
+.+.|++.|| +|+.
T Consensus 269 ~~~~~~l~~r~~~~~ 283 (394)
T PRK10213 269 TSLSSFILKRSVKLA 283 (394)
T ss_pred HHHHHHHHhccchhH
Confidence 9999999999 5444
No 10
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=183.93 Aligned_cols=280 Identities=9% Similarity=0.036 Sum_probs=169.7
Q ss_pred chhHHHHHHHHHHHHHHHHhHHhhh----hhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHH
Q 020422 27 TRDVHILSCAFLLIFLAYGAAQNLE----TTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (326)
Q Consensus 27 ~~~~~~l~l~~~~~~~~~~~~~~l~----~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~ 102 (326)
+++...+.++++.....+.....+. ++++.+........+...+.+.+++++.|+++||+|||+++..+.+.+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~ 96 (426)
T PRK12307 17 KNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVG 96 (426)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 3445555555544444443333333 344433333333456666778889999999999999999999999988887
Q ss_pred HHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 103 ~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.... ++++++.++++|++.|++.+..++....++.|+. |+++|+++.+++..+..+|..+++.+...+.
T Consensus 97 ~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~ 166 (426)
T PRK12307 97 TGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESW----------PKHLKSKASAFLVSGFGIGNIIAAYFMPSFA 166 (426)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhC----------CHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc
Confidence 7654 7889999999999999999999998888999986 8889999999999999999999887776654
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHh
Q 020422 182 KDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 261 (326)
Q Consensus 182 ~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 261 (326)
.. .+||+. |++.....++...+....||+++.++++.++...+++..+++...+..+.+++++++.........
T Consensus 167 ~~-----~~w~~~-f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (426)
T PRK12307 167 EA-----YGWRAA-FFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL 240 (426)
T ss_pred cc-----CCHHHH-HHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHH
Confidence 32 479874 332221111111111123333211110000000000111111111234556677665433221111
Q ss_pred hHHHH--H-hhhcccccccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 262 GLQQA--F-VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 262 g~~~~--~-~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
..... + ....+++.+...+.+.+..+......+++..+++++.|+++|| ||+.+..+.+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~ 306 (426)
T PRK12307 241 FSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMS 306 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 11111 1 1222232233334555677888888899999999999999999 777666665443
No 11
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.89 E-value=2.7e-22 Score=191.64 Aligned_cols=280 Identities=16% Similarity=0.121 Sum_probs=195.2
Q ss_pred cccCccccchhHHHHHHHHH--HHHHHHHh--------HHhhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhch
Q 020422 19 QVLTPKNYTRDVHILSCAFL--LIFLAYGA--------AQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGS 88 (326)
Q Consensus 19 ~~~~~~~~~~~~~~l~l~~~--~~~~~~~~--------~~~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Gr 88 (326)
+|+.+|+.++.+-+..+.++ ..+..+.. +.++.++.+...+.-+...++++++|++++++++.+.||++.
T Consensus 31 ~~~~~~~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~l 110 (495)
T KOG2533|consen 31 PPKEERKLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPL 110 (495)
T ss_pred cchHhhHHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCCh
Confidence 34556654444444444433 33333321 123445555444555556788999999999999999999999
Q ss_pred hhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHH
Q 020422 89 KNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (326)
Q Consensus 89 r~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~ 167 (326)
.+.+....++++++++.. ..+|++.+++.|+++|+.++..||+...+++.++ .++|||+.+|++++..+
T Consensus 111 s~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy----------~~~e~g~r~~~~~a~~~ 180 (495)
T KOG2533|consen 111 SKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWY----------GKSERGLRMGIWYASAS 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhc----------ChhhhhhhHHHHHHhcc
Confidence 999999999999888664 6889999999999999999999999999999998 77999999999999999
Q ss_pred HhHHHHHHHHHHHhcCCC-CCCCCchhHHHHHHHHHHH-HHHHHHHhccCCcccc---cccc-----ccccch--hhchH
Q 020422 168 SHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDKG---EKET-----ADASVN--FYSYL 235 (326)
Q Consensus 168 ~g~~~G~li~~~l~~~~~-~~~~~wr~~~f~~~~~~~~-l~~il~~~l~~~~~~~---~~~~-----~~~~~~--~~~~~ 235 (326)
+|+++|+++++.+.+..+ ....+||+ .|++-+++++ .++++++++|+.+.+. ++++ ++.++. +..+.
T Consensus 181 ~g~i~ggliA~g~~~~~~~~~~~gW~~-~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~ 259 (495)
T KOG2533|consen 181 LGNIFGGLIAYGVFKLNGSGGLAGWRW-LFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIEN 259 (495)
T ss_pred hhhHHHHHHHHHhhhhcCCCCcCCcee-ehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCccc
Confidence 999999999988765222 23578998 4666666665 4556677888755421 1110 011100 00000
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccc--cCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 236 VSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPA--LGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
+.+.+.+.+.++||++|......+++......+. .+.|.+..+. .+..+...+...+.++++++.+++|.++||
T Consensus 260 ~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~-~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr 335 (495)
T KOG2533|consen 260 KFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFS-YWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDR 335 (495)
T ss_pred ccCHHHHHHHHhchhHHHHHHHHHHHhhccccHH-HHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHH
Confidence 0123456789999999998776665544322222 3344443332 444467788888999999999999999999
No 12
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.89 E-value=1.1e-20 Score=179.24 Aligned_cols=268 Identities=13% Similarity=0.040 Sum_probs=169.3
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHhhhhhhcC-CCCchh----HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~-~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
.+|++++..+++...|......+.+...+.. +.+.+. ...++...++++..++.|++.||+|+|+++.++.++++
T Consensus 32 a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~ 111 (462)
T PRK15034 32 ARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILI 111 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHH
Confidence 3578888888888878777766665555432 333322 23456667888889999999999999999999998887
Q ss_pred HHHHHh-hh-----hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHH
Q 020422 101 LFVAAN-LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (326)
Q Consensus 101 ~~~~~~-~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~ 174 (326)
+.+... ++ ++++.+++.|++.|++ +..+++....+++++ |+++||++.|++....++|..+++
T Consensus 112 i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wf----------p~~~rG~A~Gi~~g~G~~G~~l~~ 180 (462)
T PRK15034 112 IPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFF----------PKAKQGSALGINGGLGNLGVSVMQ 180 (462)
T ss_pred HHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHC----------CHhHhHHHHHHHHHHHhhHHHHHH
Confidence 777654 44 7899999999999998 668888888888886 888999999999877778877766
Q ss_pred HHHHHHh-----cCCC--------CCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHH
Q 020422 175 LITLAVL-----KDDK--------GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKS 241 (326)
Q Consensus 175 li~~~l~-----~~~~--------~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (326)
++...+. .... .+..+||.. .++...+.++..++.+++.++.++++ .+ +++
T Consensus 181 ~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~-~~~~~~~~iv~~i~~~~~~~~~~~~~-----------~~----~~~ 244 (462)
T PRK15034 181 LVAPLVIFVPVFAFLGVNGVPQADGSVMSLANA-AWIWVPLLAIATIAAWSGMNDIASSR-----------AS----IAD 244 (462)
T ss_pred HHHHHHHHHHHHHHhccccccccccchHHHHHH-HHHHHHHHHHHHHHHHHhCCCccccc-----------cC----HHH
Confidence 6554322 1110 012346653 33444444444444444333222110 11 233
Q ss_pred HHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 242 ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 242 ~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
..+.+|+|+.|++....+.+.....- .+.+.|.+..+..+............+...++.+++|+++|| |++++..+.
T Consensus 245 ~~~vlk~~~~Wllslly~~tFG~fvg-~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~ 323 (462)
T PRK15034 245 QLPVLQRLHLWLLSLLYLATFGSFIG-FSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINF 323 (462)
T ss_pred HHHHhCCCchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHH
Confidence 45688999999877655433211111 122333333333322222222333456677888999999999 666655555
Q ss_pred HH
Q 020422 320 VF 321 (326)
Q Consensus 320 ~~ 321 (326)
+.
T Consensus 324 i~ 325 (462)
T PRK15034 324 IF 325 (462)
T ss_pred HH
Confidence 43
No 13
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.89 E-value=5.5e-22 Score=190.84 Aligned_cols=262 Identities=9% Similarity=-0.084 Sum_probs=165.1
Q ss_pred HHHHHHHHHhHHhhhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh------
Q 020422 37 FLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN------ 106 (326)
Q Consensus 37 ~~~~~~~~~~~~~l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~------ 106 (326)
+++.+..+...+...+++.++.+.+. +..+..+.++++++++.|+++||+|||+++..+.+++++.+...
T Consensus 38 ~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (467)
T PRK09556 38 YLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS 117 (467)
T ss_pred HHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 44444444444444444443333322 23456677889999999999999999999998888776655432
Q ss_pred hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCC
Q 020422 107 LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG 186 (326)
Q Consensus 107 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~ 186 (326)
.+++++.+++.|+++|++++..+++..+++++++ |+++||+++|++..+.++|.++|+++...+.....
T Consensus 118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~----------~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~- 186 (467)
T PRK09556 118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWT----------PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF- 186 (467)
T ss_pred ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHc----------CccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-
Confidence 2578999999999999999999999889999987 88999999999999999999999888765543211
Q ss_pred CCCCchhHHHHHHHHHHHH-HHHHHHhccCCccccc-cccc-----c--ccc----hhhchHHHHHHHHHHhhhcchhHH
Q 020422 187 GSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKGE-KETA-----D--ASV----NFYSYLVSLSKSITTLLADVRMLL 253 (326)
Q Consensus 187 ~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~~~~~-~~~~-----~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 253 (326)
..+||. .|.+.+++.++ +++.+++.++++++.. .+.+ + .++ +++.+.++.++ .+.+|+|.++.
T Consensus 187 -~~~~~~-~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~ 262 (467)
T PRK09556 187 -DGHVIG-MFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFV--EYVLKNPVIWL 262 (467)
T ss_pred -cCcchh-HHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHH--HHHHcChHHHH
Confidence 125776 34444444443 3333344555432110 0000 0 000 00111111111 13678888887
Q ss_pred HHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhH
Q 020422 254 IIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLL 314 (326)
Q Consensus 254 l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~ 314 (326)
.....++......... .+.|.+.. .+++..+.+.......++..+++++.|+++|| ||+.
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~ 326 (467)
T PRK09556 263 LCFANIFLYIVRIGID-NWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA 326 (467)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch
Confidence 6655443332221112 23343332 34556677888888889999999999999999 4443
No 14
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.89 E-value=5.2e-21 Score=182.41 Aligned_cols=227 Identities=11% Similarity=0.017 Sum_probs=155.4
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+...+++++++++.|++.||+|||+++.++.+++++..... ..++++.+++.|++.|++.|..++...+++.+++
T Consensus 64 ~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~--- 140 (434)
T PRK11663 64 ATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWY--- 140 (434)
T ss_pred HHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhC---
Confidence 455666778889999999999999999999999888777664 7889999989999999999998888888888886
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCccccc-
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKGE- 221 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~~~~~- 221 (326)
|+++||+++|+++.+.++|..+|+++.+.+... .+||+. |.+.+++.++ ..+..++++|++++..
T Consensus 141 -------~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~gw~~~-f~~~~i~~~~~~~~~~~~~~~~p~~~~~ 207 (434)
T PRK11663 141 -------SRTERGGWWAIWNTAHNVGGALIPLVVGAIALH-----YGWRYG-MMIAGIIAIVVGLFLCWRLRDKPQAMGL 207 (434)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----ccHHHH-HHHHHHHHHHHHHHHHHHcCCCHhhcCC
Confidence 778999999999999999999999988777643 479874 4444444333 3334456676543210
Q ss_pred -c------ccccc-cch--hhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHH
Q 020422 222 -K------ETADA-SVN--FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGA 289 (326)
Q Consensus 222 -~------~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~ 289 (326)
+ +.++. .+. ++.+.++.++ .+.+++++++.....++........... +.|.+.. .+.+..+.+..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~l~~~~g~s~~~a~~~ 284 (434)
T PRK11663 208 PSVGEWRHDALELAQQQEGAGLSRKEILT--KYVLLNPYIWLLSFSYVLVYVVRAAIND-WGNLYMSETLGVDLVTANSA 284 (434)
T ss_pred CCcccccccccccchhccccCCChhhhHH--HHHhcChHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhccCCCHHHHHHH
Confidence 0 00000 000 0112222111 1256778877755443333222222222 3333332 35566677888
Q ss_pred HHHHHHHHHHHHHHhhhhhhh
Q 020422 290 MAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 290 ~~~~gi~~~~g~~~~G~l~Dr 310 (326)
...++++..+++++.|+++||
T Consensus 285 ~~~~~~~~~~g~~~~g~l~dr 305 (434)
T PRK11663 285 VSMFELGGFIGALVAGWGSDK 305 (434)
T ss_pred HHHHHHHHHHHHHHHhhhHHH
Confidence 888999999999999999998
No 15
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.89 E-value=6e-21 Score=176.76 Aligned_cols=249 Identities=11% Similarity=0.022 Sum_probs=159.5
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
.++++++.+...-....+....++++++++.|+++||+|||+++..+.++.++..+.. +++|++.++++|.+.|++.+.
T Consensus 28 ~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 107 (377)
T TIGR00890 28 PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGI 107 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3344444333322334567777888999999999999999999999998887777654 788999999999999999998
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
.++....++.++. +++|+++.+++..+..+|..+++.+...+.. ..+||+. |.+.++..++..
T Consensus 108 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~-f~~~~~~~~~~~ 170 (377)
T TIGR00890 108 AYGIALNTAVKWF-----------PDKRGLASGIIIGGYGLGSFILSPLITSVIN-----LEGVPAA-FIYMGIIFLLVI 170 (377)
T ss_pred HHHhHHHHHHHHc-----------CcccHHHHHHHHHhcchhHhHHHHHHHHHHh-----cccHHHH-HHHHHHHHHHHH
Confidence 8877766666663 4689999999999988888776555444432 2479874 544455444433
Q ss_pred -HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchH
Q 020422 208 -ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGV 286 (326)
Q Consensus 208 -il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 286 (326)
+..+++++++++++++.++ ... + .++..+.+|+++++.+....+...+........+++...+.+.+.++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~-----~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (377)
T TIGR00890 171 VLGAFLIGYPPGQLIKTNIE-----VSV-K--DYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGFL 242 (377)
T ss_pred HHHHHheecCchhccccCcc-----cch-h--hhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHHH
Confidence 3344555544322111000 000 0 112335667888776554433333322222222222222223444567
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 287 GGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 287 g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
+......+++..+++++.|+++|| ||+.+..+.+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~ 280 (377)
T TIGR00890 243 VLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGIS 280 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Confidence 888888999999999999999999 666655554433
No 16
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.89 E-value=9.7e-21 Score=182.65 Aligned_cols=231 Identities=14% Similarity=0.065 Sum_probs=145.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+..+.++.+++++.|+++||+|||+++..+.+++++..+.. +.+++..++++|+++|++.+...+ ...+++++.
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~--- 152 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFVS-CQYWMSTMF--- 152 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhHH-HHHHHHHhc---
Confidence 445556777888999999999999999999888887776654 678888888999999999986543 445677775
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC---C-CCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD---D-KGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~---~-~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~ 219 (326)
|+++||++.|+.....++|..+|+.+...+... . .....+||+. |++.+++.++..++.++++++.++
T Consensus 153 -------~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~-f~i~g~l~l~~~l~~~~~~~~~p~ 224 (476)
T PLN00028 153 -------NGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA-FFVPGLLHIIMGILVLTLGQDLPD 224 (476)
T ss_pred -------ChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH-HHHHHHHHHHHHHHHHHHcCcCCC
Confidence 888999999999888888888877665444221 1 0112479984 555555555444444444432221
Q ss_pred cc-cccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-cccCcchHHHHHHHHHHHH
Q 020422 220 GE-KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFD 297 (326)
Q Consensus 220 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~gi~~ 297 (326)
.+ ++..+....++.+.. +.+.+.+++++.+.+...++..........+..++.+.. .+.+.+..+.....+++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~ 301 (476)
T PLN00028 225 GNYRELKKSGTMPKDSFS---KVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMN 301 (476)
T ss_pred CchhhHHhcCccccccHH---HHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 11 100000000111111 223456788887765544332211111112122222222 2556667888888999999
Q ss_pred HHHHHHhhhhhhh
Q 020422 298 AISLLGFATFFSV 310 (326)
Q Consensus 298 ~~g~~~~G~l~Dr 310 (326)
.++++++|+++||
T Consensus 302 ~ig~~~~G~lsDr 314 (476)
T PLN00028 302 LFARPAGGYLSDV 314 (476)
T ss_pred HHHHhhhHHHHHH
Confidence 9999999999998
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.88 E-value=2.5e-20 Score=173.82 Aligned_cols=243 Identities=14% Similarity=0.043 Sum_probs=164.1
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHH
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~ 128 (326)
++++++.+........+.......+++++.|++.||+|||+++..+.++.++..... ..++++.+++.|++.|++.+..
T Consensus 31 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 110 (385)
T TIGR00710 31 IAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAG 110 (385)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHH
Confidence 444454443333334566667778889999999999999999999988877766654 6788888899999999999999
Q ss_pred HhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 020422 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (326)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i 208 (326)
.+...+++.|+. |+++|++..|+......+|..+|+.+++.+... .+||.. |.+..+..++..+
T Consensus 111 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~~~~~-~~~~~~~~~~~~~ 174 (385)
T TIGR00710 111 SVISQALVRDIY----------PGEELSRIYSILMPVLALAPAVAPLLGGYILVW-----LSWHAI-FAFLSLAGILLSA 174 (385)
T ss_pred HHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHHH-HHHHHHHHHHHHH
Confidence 998888888886 888999999999999999999999998877543 468874 4444444444333
Q ss_pred H-HHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcch
Q 020422 209 L-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSG 285 (326)
Q Consensus 209 l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 285 (326)
+ .+..||++++++++ +. ++..++..+.+|+|+++............ .+....+.|.+.. .+.+.++
T Consensus 175 ~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 175 LIFFILPETLPYEARI-------QI---STYFETFLLLLKSKMFWGYALIYGASFGG-FFAFFSGAPFVYIDIMGVSPSV 243 (385)
T ss_pred HHHHhCCCCCCCcccC-------CH---HHHHHHHHHHHcCchhHHHHHHHHHHHHH-HHHHHHcChHHHHHHcCCCHHH
Confidence 3 34456543322111 01 11123344567788877654332221111 1111122333322 3455667
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 286 VGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 286 ~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
.+......+++..++.++.|+++|| ||+.+..+.
T Consensus 244 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~ 279 (385)
T TIGR00710 244 FGLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGL 279 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 8888888999999999999999999 555444443
No 18
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=9.4e-23 Score=187.59 Aligned_cols=290 Identities=13% Similarity=0.047 Sum_probs=194.4
Q ss_pred CCCCCCCCccccccccc-cCccccchhHHHHHHHHHHHHHHHHhHH----hhhhhhcCC-CCchhHHHHHHHHHHhhhhh
Q 020422 4 VDSRDEEAPLVADSLQV-LTPKNYTRDVHILSCAFLLIFLAYGAAQ----NLETTVNTE-GNLGTISLGILYTSFTCFSL 77 (326)
Q Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~l~~~~~~~~~~~~~----~l~~~l~~~-~~~g~~~~~~~~~~~~~~~l 77 (326)
.+..+..+|++..+..| .++++.++.+.++.+.-++.+.....+. .+|+.+|.+ ..+|.++ .....++.++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~fni~~s~~Gll~-~vf~v~~~i~sP 86 (493)
T KOG1330|consen 8 RTTTSSGNPLIELEGLDHLSMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYFNISDSELGLLQ-TVFIVVFMIASP 86 (493)
T ss_pred CCCccCCCcccccccccccccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhcCCCchhccchh-HHHHHHHHHHHH
Confidence 34456788888753322 6888999999999998888888776654 556666654 5566654 455578899999
Q ss_pred hHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchh
Q 020422 78 VASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIG 156 (326)
Q Consensus 78 ~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg 156 (326)
+.|.++||+.||+++.+|..+|.+.+++. +...+|++.++|.+.|+|++...+.+++.++|.+ |+++|+
T Consensus 87 l~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f----------~~~~Rs 156 (493)
T KOG1330|consen 87 LFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSF----------PDDKRS 156 (493)
T ss_pred HHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcC----------cchhhh
Confidence 99999999999999999999999988764 7788999999999999999999999999999987 889999
Q ss_pred hHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCccccccccccccchhhchH
Q 020422 157 SFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDKGEKETADASVNFYSYL 235 (326)
Q Consensus 157 ~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~~~~~~~~~~~~~~~~~~~ 235 (326)
+.+++|+.+...|..+|.+.+..+.... ..||+. |+..++++++ +++.+++.+||+++.+++..+.. +..++.
T Consensus 157 ~~~~ify~~ipvGsglG~vvgs~va~~~----~~Wr~a-f~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~-~~~~~~ 230 (493)
T KOG1330|consen 157 RVLGIFYFAIPVGSGLGYVVGSVVASLT----FWWRWA-FRGSAVLGVIVGLLVFLFVREPERGARDEVDGEN-KMVKPF 230 (493)
T ss_pred HHHHHhhhhcccccceeEEeeeeeccCc----cceEEE-EEeehHHHHHHHHHHHhhccCcccccccccccCC-cCCCCc
Confidence 9999999999999988887776654432 248874 6566666655 44556778887763222111100 000111
Q ss_pred HHHHHHHHHhhhcchhHHHHHHHH-HhhHHHHH--hhhccccccc-ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 236 VSLSKSITTLLADVRMLLIIPLFA-YSGLQQAF--VWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~--~~~~~~~~~~-~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
....++++...|++.+......+. ..+...++ +...+.++.. -.+.+.+...+...+...++.+|.+++|.++||
T Consensus 231 ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 231 TSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred cchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 122344445555555544332221 12221122 1111212211 112222333444556667788999999999998
No 19
>PRK10133 L-fucose transporter; Provisional
Probab=99.88 E-value=1.1e-20 Score=180.29 Aligned_cols=291 Identities=11% Similarity=0.081 Sum_probs=180.7
Q ss_pred CccccccccccCccccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHh
Q 020422 11 APLVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVL 86 (326)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~ 86 (326)
|..=+-||.|.+.++....++++.+.++..-........+.+.+.++.+.+. ...+..+.++.+++++.|++.||+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~ 88 (438)
T PRK10133 9 QSYRAVDKDAGQSRSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL 88 (438)
T ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344557777777778888888888777665555555544444443333332 335666678889999999999999
Q ss_pred chhhHHHHHhHHHHHHHHHh----hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHH
Q 020422 87 GSKNALILGTTGYWLFVAAN----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF 162 (326)
Q Consensus 87 Grr~~l~~g~~~~~~~~~~~----~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~ 162 (326)
|||+++..+..++++....+ .++++..++++|+++|+|.|..+++...++.++. ++++|++.++++
T Consensus 89 G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~----------~~~~~~~~~s~~ 158 (438)
T PRK10133 89 SYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLG----------PESSGHFRLNLA 158 (438)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC----------ChhhHHHHHHHH
Confidence 99999999999988877542 4689999999999999999999999888888764 666677789999
Q ss_pred HHHHHHhHHHHHHHHHHHhc-CCC------------CCCCCchhH-------HHHHHHHHHHHHHHHHHhccCCcccccc
Q 020422 163 WGMFASHQFVGNLITLAVLK-DDK------------GGSTSGTTL-------LFIVFLGVITLGTILMCFLRKEEDKGEK 222 (326)
Q Consensus 163 ~~~~~~g~~~G~li~~~l~~-~~~------------~~~~~wr~~-------~f~~~~~~~~l~~il~~~l~~~~~~~~~ 222 (326)
...+.+|..+|++++..+.. ... ....+||.. .|.....+..+..++..+.+.|+.++++
T Consensus 159 ~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~ 238 (438)
T PRK10133 159 QTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN 238 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc
Confidence 99999999999988765431 100 000134321 1222122221111222222222111111
Q ss_pred ccccccchhhchHHHHHHHHHHhhhcchhHHHHHH-HHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHH
Q 020422 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAI 299 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~ 299 (326)
+ + +++..+. .++..+.+++|+++..... +++.+.+.+. ..+.++.+.+ .+.+....++.+..+.++..+
T Consensus 239 ~-~---~~~~~~~---~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~v 310 (438)
T PRK10133 239 H-S---DAKQGSF---SASLSRLARIRHWRWAVLAQFCYVGAQTAC-WSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFI 310 (438)
T ss_pred c-c---cccccch---hhhHHHHHhCchHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 0 0 0011111 1223356778887654332 2223333222 2222222222 356677889999999999999
Q ss_pred HHHHhhhhhhh--hhhHHhHHH
Q 020422 300 SLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 300 g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
|+.++|++.|| ||+++..+.
T Consensus 311 G~~~~g~l~~r~g~~~~l~~~~ 332 (438)
T PRK10133 311 GRFTGTWLISRFAPHKVLAAYA 332 (438)
T ss_pred HHHHHHHHHHHcCHHHHHHHHH
Confidence 99999999999 555544444
No 20
>PRK09952 shikimate transporter; Provisional
Probab=99.88 E-value=1.3e-20 Score=179.95 Aligned_cols=237 Identities=14% Similarity=0.076 Sum_probs=143.1
Q ss_pred HHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhH--------HHHHHHHHhhhhhHHHHhhhhHHHH
Q 020422 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLT 137 (326)
Q Consensus 67 ~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~l~ 137 (326)
+.++...+++++.|+++||+|||+++..+.+++++.++.. +++++. .+++.|.++|++.|..+++...++.
T Consensus 72 ~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 72 VGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 4445567888899999999999999999999999888765 777765 5778999999999999999899999
Q ss_pred HHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
|+. |+++||+..+....+..+|..++..+...+..... ....+||.. |.+..+..++...+...+|
T Consensus 152 e~~----------p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~-f~~~~~~~l~~~~l~~~~~ 220 (438)
T PRK09952 152 ESA----------PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIP-FLFSIVLVLIALWVRNGME 220 (438)
T ss_pred HhC----------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHH-HHHHHHHHHHHHHHHHhCC
Confidence 987 88899999998888888888887766554432211 113689974 4433333332222222344
Q ss_pred CCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccC--cchHHHHHHH
Q 020422 215 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG--VSGVGGAMAV 292 (326)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~ 292 (326)
|+++..++..++.+.+++.+.. ....++|+.+........+.....+....+.+.+..+..+ .+........
T Consensus 221 es~~~~~~~~~~~~~~~~~~~~------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~ 294 (438)
T PRK09952 221 ESAEFEQQQHEQAAAKKRIPVI------EALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLL 294 (438)
T ss_pred CChhHHHHHhhcccccccCCHH------HHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 4432111100000000011111 1234566655543322211111111111233333322233 3333344455
Q ss_pred HHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 293 YGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 293 ~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
.++...++..+.|+++|| ||+.+..+.+
T Consensus 295 ~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~ 324 (438)
T PRK09952 295 VGGLSCLTIPCFAWLADRFGRRRVYITGAL 324 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 677778889999999999 6666655543
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.88 E-value=1.9e-20 Score=176.53 Aligned_cols=233 Identities=14% Similarity=0.062 Sum_probs=150.1
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+...++..+++++.|+++||+|||+++..+.++.++..+.. +.++++.+++.|++.|++.+..++...+++.|+.
T Consensus 56 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~--- 132 (406)
T PRK11551 56 FSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAV--- 132 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc---
Confidence 455556677888999999999999999999988777766554 6788998999999999999999988888999986
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH-HHHHhccCCcccccc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDKGEK 222 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~-il~~~l~~~~~~~~~ 222 (326)
|+++|++++++++.+..+|..+++.++..+.. ..+||.. |.+..++.++.. +..+++||+++++++
T Consensus 133 -------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 199 (406)
T PRK11551 133 -------GPRLRGTAVSLMYCGVPFGGALASVIGVLAAG-----DAAWRHI-FYVGGVGPLLLVPLLMRWLPESRAFAQA 199 (406)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-----ccCHHHH-HHHHHHHHHHHHHHHHHhCCCChhHHhc
Confidence 78899999999999999999999888766543 2478874 444444333332 334567876542211
Q ss_pred ccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchHHHHHHHHHHHHHHHHH
Q 020422 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLL 302 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~ 302 (326)
+.++ +++.+.. +...+..++++.+.+....+.............++...+.+.+....+......+++..++++
T Consensus 200 ~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~ 273 (406)
T PRK11551 200 AGAG---KQRAPVL---RALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAGLVQIAFNIGGALGSL 273 (406)
T ss_pred cCcc---hhhhhhH---HHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhhHHHHHHHHHHHHHHH
Confidence 1000 0111111 111111112222222222221111111112222222333455666788888899999999999
Q ss_pred Hhhhhhhh--hhhHHhHHH
Q 020422 303 GFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 303 ~~G~l~Dr--R~~~~~~g~ 319 (326)
+.|+++|| ||+.+..+.
T Consensus 274 ~~g~l~dr~g~~~~~~~~~ 292 (406)
T PRK11551 274 LIGALMDRLRPRRVVLLIY 292 (406)
T ss_pred HHHHHHHHHhHHHHHHHHH
Confidence 99999999 555544443
No 22
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.7e-21 Score=176.50 Aligned_cols=266 Identities=8% Similarity=0.020 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhcCCCCchhH----HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h
Q 020422 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L 107 (326)
Q Consensus 33 l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~----~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~ 107 (326)
.-++++.+|..+...+..++++.++.+.+-. ..+.++++|+++.++.|.++||.++|..+..|+++.++..+.+ +
T Consensus 34 ~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gf 113 (448)
T COG2271 34 IFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGF 113 (448)
T ss_pred HHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhh
Confidence 3444666666666666666666655433222 2577788999999999999999999999999999998888776 7
Q ss_pred hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH--HHHhcCCC
Q 020422 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT--LAVLKDDK 185 (326)
Q Consensus 108 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~--~~l~~~~~ 185 (326)
.++...+.+.-.++|+.+|.-||++...+++++ +.+|||+..+++++..++|..+-+++. +.+..+
T Consensus 114 s~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wf----------sr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~-- 181 (448)
T COG2271 114 SPSLFLFAVLWVLNGWFQGMGWPPCARTITHWF----------SRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFH-- 181 (448)
T ss_pred hhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHc----------CccccCceEEEehhhhhcccchHHHHHHHHHHHhc--
Confidence 889999888999999999999999999999997 889999999999999999998888877 555432
Q ss_pred CCCCCchhHHHHHHHHHHH-HHHHHHHhccCCcccc--------cccccc--ccchhh--chHHHHHHHHHHhhhcchhH
Q 020422 186 GGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDKG--------EKETAD--ASVNFY--SYLVSLSKSITTLLADVRML 252 (326)
Q Consensus 186 ~~~~~wr~~~f~~~~~~~~-l~~il~~~l~~~~~~~--------~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~ 252 (326)
.+||.. |+..+++++ +++++.+.++|++++. ++|..+ .+++++ .+.++.+. ..+++||.+|
T Consensus 182 ---~~w~~~-f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~--~YVL~Nk~iW 255 (448)
T COG2271 182 ---GGWRAA-FYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFV--KYVLKNKLIW 255 (448)
T ss_pred ---cchhHH-HHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHH--HHHHcChHHH
Confidence 479875 545555554 4555666778766531 111111 111111 33444443 2578999999
Q ss_pred HHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh----hhhHHhH
Q 020422 253 LIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV----HSLLVGL 317 (326)
Q Consensus 253 ~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr----R~~~~~~ 317 (326)
.+....++.-..-.- ..++.|.+.. ++.+.....+....+-.++..|++++|++||| ||-+..+
T Consensus 256 ~la~a~vfvYivR~g-i~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~ 325 (448)
T COG2271 256 LLALANVFVYVVRYG-INDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMAL 325 (448)
T ss_pred HHHHHHHHHHHHHHH-HhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHH
Confidence 887665444332211 2244555443 46667788999999999999999999999999 5544333
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.88 E-value=2.8e-20 Score=174.39 Aligned_cols=261 Identities=10% Similarity=-0.011 Sum_probs=171.2
Q ss_pred hhHHHHHHHHHHHHHHHHhHH----hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH
Q 020422 28 RDVHILSCAFLLIFLAYGAAQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (326)
Q Consensus 28 ~~~~~l~l~~~~~~~~~~~~~----~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~ 103 (326)
|.++.+..+.+.......... .++++++.+........+....++.+++++.|++.||+|||+++..+.++.++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 82 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGN 82 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHH
Confidence 445555555444433333333 3444444443333334667778888999999999999999999999998888777
Q ss_pred HHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 104 ~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+.. +++|++.+++.|++.|++.+...+....++.++. |+++|+++.+++..+..+|..+|+.++..+..
T Consensus 83 ~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~ 152 (382)
T PRK10091 83 AMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKII----------KPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ 152 (382)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhC----------ChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh
Confidence 654 7889999999999999999998887777777775 77889999999999999999999988877654
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHH-HHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHh
Q 020422 183 DDKGGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 261 (326)
Q Consensus 183 ~~~~~~~~wr~~~f~~~~~~~~l~~i-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 261 (326)
. .+||+. |.+..+..++..+ ..+.+||++++++. +.++. .+.+|+++.+......+..
T Consensus 153 ~-----~gwr~~-f~~~~~~~~~~~~~~~~~lp~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~~ 211 (382)
T PRK10091 153 E-----FSWRYT-FLLIAVFNIAVLASIYFWVPDIRDEAKG-----------GLREQ----FHFLRSPAPWLIFAATMFG 211 (382)
T ss_pred h-----ccHHHH-HHHHHHHHHHHHHHHHHhCCCCCccccc-----------CHHHH----HHHhcChHHHHHHHHHHHH
Confidence 3 479874 5444444443332 33456664321110 11111 2445677666544332222
Q ss_pred hHHHHHhhhcccccccc-cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 262 GLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 262 g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
......+.+..++.+.. .+.+.++.++.....+++..+++++.|++.|| ||+.+..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~ 272 (382)
T PRK10091 212 NAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTD 272 (382)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHH
Confidence 11111111222333322 35566788888999999999999999999999 555544443
No 24
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.88 E-value=6.5e-20 Score=177.76 Aligned_cols=276 Identities=13% Similarity=0.066 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHhHH----hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh
Q 020422 31 HILSCAFLLIFLAYGAAQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (326)
Q Consensus 31 ~~l~l~~~~~~~~~~~~~----~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~ 106 (326)
..+.++.++........+ .+..+++.+.+...+..+...++++.++++.|+++||+|||++++.+.+++++..+.+
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~ 88 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAA 88 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 333444444444443343 3344444444333444556666778888999999999999999999999988877654
Q ss_pred -hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC
Q 020422 107 -LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 185 (326)
Q Consensus 107 -~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~ 185 (326)
.++|++.++++|+++|+|.+...+.....+.+.. .|+++|++++|++.....+|..+||.+++.+.+.
T Consensus 89 ~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~---------~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~-- 157 (495)
T PRK14995 89 AFSPTASWLIATRALLAIGAAMIVPATLAGIRATF---------TEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEH-- 157 (495)
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--
Confidence 7899999999999999999998887666665553 2678999999999999999999999999888654
Q ss_pred CCCCCchhHHHHHHHHHHHHHHH-HHHhccCCcccccc--ccccc--------------c--chhh-chH----------
Q 020422 186 GGSTSGTTLLFIVFLGVITLGTI-LMCFLRKEEDKGEK--ETADA--------------S--VNFY-SYL---------- 235 (326)
Q Consensus 186 ~~~~~wr~~~f~~~~~~~~l~~i-l~~~l~~~~~~~~~--~~~~~--------------~--~~~~-~~~---------- 235 (326)
.+||+. |++...+.++..+ ..+++|++++++++ |.... . .... .++
T Consensus 158 ---~gwr~~-f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (495)
T PRK14995 158 ---FYWGSV-FLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGA 233 (495)
T ss_pred ---CChHHH-HHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHH
Confidence 479984 5454544444433 34556664332111 10000 0 0000 000
Q ss_pred -------HHHHHH-----HHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHH
Q 020422 236 -------VSLSKS-----ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISL 301 (326)
Q Consensus 236 -------~~~~~~-----~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~ 301 (326)
..+.+. ..+.+|++.+.......+..++...... .+.|.+.+ .+.++.+.|+.+...+++..+++
T Consensus 234 ~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~ 312 (495)
T PRK14995 234 LLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFE-LLMAQELQFVHGLSPLEAGMFMLPVMVASGFSG 312 (495)
T ss_pred HHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000000 0245666666554433333322211111 22233322 45667789999999999999999
Q ss_pred HHhhhhhhh--hhhHHhHHHHHh
Q 020422 302 LGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 302 ~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
.+.|++.|| ||+++..|.++.
T Consensus 313 ~~~g~l~~r~g~~~~~~~g~~~~ 335 (495)
T PRK14995 313 PIAGILVSRLGLRLVATGGMALS 335 (495)
T ss_pred HHHHHHHHHcCchHHHHHHHHHH
Confidence 999999999 677766666543
No 25
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.88 E-value=4e-20 Score=170.70 Aligned_cols=235 Identities=13% Similarity=0.016 Sum_probs=156.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhh-----hhHHHHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP-----SWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~-----~~~~l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
.++..+...+++++.|+++||+|||+++..+.++.++..... +.+ +++.+++.|++.|++.+..+++..+++.|
T Consensus 40 ~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 119 (365)
T TIGR00900 40 ALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPD 119 (365)
T ss_pred HHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455556777889999999999999999999888766655443 444 88888899999999999999998999999
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
+. |+++|++..|+...+.++|..+|+++++.+... .+||+. |++..+..++..++.+.++++++
T Consensus 120 ~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 120 LV----------PEEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT-----LGIKWA-IWVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred cC----------CHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHH-HHHHHHHHHHHHHHHHhcccccC
Confidence 87 788999999999999999999999998887653 468874 44434434444333344433222
Q ss_pred ccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHH
Q 020422 219 KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAF 296 (326)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~ 296 (326)
+++++.+ . ++...++..+...+.+|+|+++......+............+.|.+..+ +.+..+.+......+++
T Consensus 184 ~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (365)
T TIGR00900 184 AASEIQA-L---SNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLG 259 (365)
T ss_pred CCccccc-c---chhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHH
Confidence 1111100 0 0011111112233456778777655443333322221221233444332 45566788889999999
Q ss_pred HHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 297 DAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 297 ~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
..+++.+.+++.|| ||+.+..+.
T Consensus 260 ~~~~~~~~~~l~~~~~~~~~~~~~~ 284 (365)
T TIGR00900 260 ALLGALLLGLLGRYFKRMALMTGAI 284 (365)
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHH
Confidence 99999999999999 555555443
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.88 E-value=4.4e-20 Score=173.12 Aligned_cols=280 Identities=11% Similarity=0.021 Sum_probs=169.5
Q ss_pred chhHHHHHHHHHHHHHHHHhHHhhhhhh----cCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHH
Q 020422 27 TRDVHILSCAFLLIFLAYGAAQNLETTV----NTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (326)
Q Consensus 27 ~~~~~~l~l~~~~~~~~~~~~~~l~~~l----~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~ 102 (326)
++.+..+.++++.....+...+.+.+++ +.+........++......+++++.|.++||+|||+++..+.++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 90 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAG 90 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 3444555555555555555444444444 333333333356667788899999999999999999999998888776
Q ss_pred HHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 103 ~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.+.. +.++++.++..|++.|++.+..++...+++.|+. |+++|+++.+++..+..+|..+|+.++..+.
T Consensus 91 ~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~ 160 (405)
T TIGR00891 91 TLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESW----------PKHLRNKASGLLISGYAVGAVVAAQVYSLVV 160 (405)
T ss_pred HHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654 6789999999999999999999999889999986 8899999999999999999999999887765
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccc-cccccc-cch------hhchHHHHHH----HHHHhhh-c
Q 020422 182 KDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGE-KETADA-SVN------FYSYLVSLSK----SITTLLA-D 248 (326)
Q Consensus 182 ~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~-~~~~~~-~~~------~~~~~~~~~~----~~~~~~~-~ 248 (326)
... ..+||.. |.+..+..++..+....+||+++.++ ++.++. .+. ++...++..+ ..++..+ +
T Consensus 161 ~~~---~~~w~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (405)
T TIGR00891 161 PVW---GDGWRAL-FFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKR 236 (405)
T ss_pred Hhc---CccHHHH-HHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhh
Confidence 432 1358874 43333333333334455676543111 110000 000 0000000001 1111111 1
Q ss_pred ch-hHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 249 VR-MLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 249 ~~-~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
+. +..+.......+....... .+.|.+.. .+.+.++.+......+++..+++++.|+++|| ||+.+..+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~ 313 (405)
T TIGR00891 237 WPTFVYLVVLVLFANLYSHPIQ-DLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLA 313 (405)
T ss_pred hHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHH
Confidence 11 1111111111111111111 12233322 24556678888888999999999999999999 66665555443
No 27
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.87 E-value=9.4e-20 Score=172.05 Aligned_cols=245 Identities=12% Similarity=0.055 Sum_probs=162.0
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHH
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~ 128 (326)
++++++.+........+..+.++.+++++.|+++||+|||+++..+...+++..+.. .+++++.++..|+++|++.+..
T Consensus 39 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 118 (406)
T PRK15402 39 VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFI 118 (406)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhH
Confidence 334444443333344566777788889999999999999999999988877766654 6788888899999999999988
Q ss_pred HhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 020422 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (326)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i 208 (326)
++...+++.|.. |+++|++..++.......+..+|+.++..+.+. .+||+. |++..++.++..+
T Consensus 119 ~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~~w~~~-~~~~~~~~~~~~~ 182 (406)
T PRK15402 119 GAVGYAAIQESF----------EEADAIKITALMANVALLAPLLGPLVGAALIHV-----LPWRGM-FVLFAALAALSFF 182 (406)
T ss_pred HHHHHHHHHHHh----------ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCccHH-HHHHHHHHHHHHH
Confidence 887778888776 778899999998888888899999988776543 478874 4444555444433
Q ss_pred H-HHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcch
Q 020422 209 L-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSG 285 (326)
Q Consensus 209 l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 285 (326)
. .+..||++++++++ .+.++..++..+.++||+++...............+. .+.|.+.. .+.+..+
T Consensus 183 ~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~g~~~~~ 252 (406)
T PRK15402 183 GLWRAMPETAGRVGEK---------LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWI-ALSPVILISGEQLSSYE 252 (406)
T ss_pred HHHHhCCCCCcccccc---------ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHhCCCHHH
Confidence 3 34456543321111 0111122233467788888775544333322211111 12233322 2445556
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 286 VGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 286 ~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
.++......++..+++++.|+++|| ||+.+..+.+
T Consensus 253 ~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~ 289 (406)
T PRK15402 253 YGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLW 289 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 7777777777888999999999999 5555555543
No 28
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.87 E-value=3.5e-20 Score=171.93 Aligned_cols=276 Identities=9% Similarity=0.012 Sum_probs=166.9
Q ss_pred hHHHHHHHHHHHHHHHHhHHh-----hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH
Q 020422 29 DVHILSCAFLLIFLAYGAAQN-----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (326)
Q Consensus 29 ~~~~l~l~~~~~~~~~~~~~~-----l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~ 103 (326)
+.+...++++..+..+..... ++++++.+........+...++..+++++.|++.||+|||+++..+.++.++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 345556666665555554443 334444443333334566667788999999999999999999999998888776
Q ss_pred HHh-hhh-hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 104 AAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 104 ~~~-~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
+.. +.+ +++.+++.|+++|++.+. ++....+++++. |+++|+++.+++....++|..+|+.++..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFF----------PKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhc----------CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 654 677 899999999999999765 455567777776 7889999999998888888888877765554
Q ss_pred cCC-----CCCCCCchhHHHHHHHHHHH-HHHHHHHhccCCccccccccc-cccchhhchHHHHHHHHHHhhhcchhHHH
Q 020422 182 KDD-----KGGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDKGEKETA-DASVNFYSYLVSLSKSITTLLADVRMLLI 254 (326)
Q Consensus 182 ~~~-----~~~~~~wr~~~f~~~~~~~~-l~~il~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 254 (326)
... +....+||+..++...++.. +..+...+.+|.+++++++.+ +.........++..++..+.+++|+++..
T Consensus 151 ~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (366)
T TIGR00886 151 GSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWIL 230 (366)
T ss_pred HHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhH
Confidence 321 01124788753233333332 333334445553332111110 00000000001112234567788887765
Q ss_pred HHHHHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHh
Q 020422 255 IPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVG 316 (326)
Q Consensus 255 ~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~ 316 (326)
....+.......... .+.+.+..+ +.+..+.+.......++..++.++.|+++|| ||+...
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~ 295 (366)
T TIGR00886 231 ALLYSVTFGSFLGVS-SIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKLL 295 (366)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhHH
Confidence 443332211111111 222333322 3455677888888888999999999999999 544433
No 29
>PRK15075 citrate-proton symporter; Provisional
Probab=99.87 E-value=2.8e-20 Score=177.42 Aligned_cols=270 Identities=12% Similarity=0.051 Sum_probs=158.8
Q ss_pred hHHHHHHHHHHHHHHHHhHHhhhhhhcCC-----CCchhHHHH--H---HHHHHhhhhhhHHHHHHHhchhhHHHHHhHH
Q 020422 29 DVHILSCAFLLIFLAYGAAQNLETTVNTE-----GNLGTISLG--I---LYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (326)
Q Consensus 29 ~~~~l~l~~~~~~~~~~~~~~l~~~l~~~-----~~~g~~~~~--~---~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~ 98 (326)
....+.++.++.+..+...+...+.+..+ .+.+....+ . .++...+++++.|+++||+|||++++.+.++
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 44445555566666666555444444322 222322211 1 1222346789999999999999999999998
Q ss_pred HHHHHHHh-hhhhhH--------HHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHh
Q 020422 99 YWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (326)
Q Consensus 99 ~~~~~~~~-~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g 169 (326)
+++.++.. +++++. .+++.|+++|++.|..+++...+++|++ |+++||++++++..+.+.|
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~----------p~~~rg~~~~~~~~~~~~g 165 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA----------TPGRKGFYTSWQSASQQVA 165 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC----------CcccchHHHHHHHHHHHHH
Confidence 88877765 677765 4678999999999999998889999987 8899999999999888888
Q ss_pred HHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhh
Q 020422 170 QFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLL 246 (326)
Q Consensus 170 ~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (326)
..+|+.++..+..... ....+||.. |++.. ... ++.+++++..++.++...+ +++.+.++.++ +..
T Consensus 166 ~~~g~~~g~~l~~~~~~~~~~~~gWr~~-f~~~~---~~~-~~~~~~~~~~~e~~~~~~~---~~~~~~~~~~~---~~~ 234 (434)
T PRK15075 166 VVFAALLGYLLNQWLSPAQMAEWGWRIP-FLIGC---LIV-PFIFLIRRSLEETEEFLAR---KHRPSMREIFR---SLA 234 (434)
T ss_pred HHHHHHHHHHHHHhCCHHHHhccchHHH-HHHHH---HHH-HHHHHHHHhcCCCHHHHHh---hhccccccHHH---HHH
Confidence 8888888766543211 124689974 33211 111 2222233222211110000 00111111111 223
Q ss_pred hcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 247 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 247 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
++++.+..............+....+.|.+.. .+.+.++.++....+++++.+++++.|+++|| ||+..+.+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~ 311 (434)
T PRK15075 235 ANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFT 311 (434)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 44444432222111111111111223444433 24555667788888889999999999999999 666555443
No 30
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.87 E-value=1.7e-19 Score=170.98 Aligned_cols=236 Identities=13% Similarity=0.081 Sum_probs=164.9
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
.+.++++.+.+......++.++++++++++.|+++||+|||++++.+..++++..+.. .++|++.++++|+++|++.+.
T Consensus 41 ~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~ 120 (413)
T PRK15403 41 NVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICF 120 (413)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 3455566555556666888889999999999999999999999999998888777664 788999999999999999986
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
..+....++.|.. |+++|+++++++..+..+|..+|+++++.+.+. .+||+. |++..+..+++.
T Consensus 121 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~-----~gw~~~-f~~~~~~~~i~~ 184 (413)
T PRK15403 121 IATVGYVTVQEAF----------GQTKGIKLMAIITSIVLVAPIIGPLSGAALMHF-----VHWKVL-FAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCHHHH-HHHHHHHHHHHH
Confidence 6555556666665 778899999999999999999999998877643 479874 555555555554
Q ss_pred HH-HHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcc
Q 020422 208 IL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVS 284 (326)
Q Consensus 208 il-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~ 284 (326)
++ .+.+||++++++++ .+.++..++..+.+|||+++............. +.+..+.|.+..+ +.+..
T Consensus 185 ~~~~~~lp~~~~~~~~~---------~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~-~~~~~~~P~~l~~~~g~s~~ 254 (413)
T PRK15403 185 VGLLLAMPETVKRGAVP---------FSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM-MSWVAVSPVILIDAGGMTTS 254 (413)
T ss_pred HHHHHhCCCCccccCCC---------CChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHhChHHHHHhcCCCHH
Confidence 43 34577754321111 011222344557789999987655443332221 1121234444332 45566
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
+.++.......+..+++.+.+++.+|
T Consensus 255 ~~gl~~~~~~~~~~i~~~l~~~~~~~ 280 (413)
T PRK15403 255 QFAWTQVPVFGAVIVANAIVARFVKD 280 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 78888877788888888888876643
No 31
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.87 E-value=6.3e-20 Score=171.89 Aligned_cols=264 Identities=16% Similarity=0.205 Sum_probs=164.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
+.+|+++.+.++.++.-.++.....+.+.+.++.+.+. ...+...++..+++++.|+++||+|||+++..+.++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~ 82 (381)
T PRK03633 3 TYTRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888876665555555444444433333322 23556666778889999999999999999999998888
Q ss_pred HHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHH
Q 020422 101 LFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (326)
Q Consensus 101 ~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~ 179 (326)
+..... ..+|++.++++|+++|++.+..++...+.+.+.. ++++|+++++++..+.++|..+|+.++..
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 83 AGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSG----------TSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 766654 6889999999999999999998887666666654 77899999999999999999999998877
Q ss_pred HhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHH
Q 020422 180 VLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA 259 (326)
Q Consensus 180 l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 259 (326)
+.... .| ...+. ...... ..+...+.+.++++++++ +..+. .+.+++|.++......+
T Consensus 153 l~~~~-----~~-~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~~~~~~~ 210 (381)
T PRK03633 153 VSTEL-----MS-VLPWV-TGLVLA-AILPLLFTRILNQQAENH-------DSTSI-------WPMLKLRQARLGVNGCI 210 (381)
T ss_pred ccccc-----cc-hHHHH-HHHHHH-HHHHHHHhcccCCCCCCC-------CCCCH-------HHHHHhcchHHHHHHHH
Confidence 64321 11 11121 111111 112122222221111100 01111 23456666554333222
Q ss_pred HhhHHHHHhhhccccccc-ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 260 YSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 260 ~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
..+......+. +.|.+. ..+.+.+..+.......++..+++.+.|+++|| ||+.+..+..+
T Consensus 211 ~~~~~~~~~~~-~lp~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~ 274 (381)
T PRK03633 211 ISGIVLGSLYG-LMPLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFV 274 (381)
T ss_pred HHHHHHHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHH
Confidence 22222222222 223332 334555677888888889999999999999999 55555444433
No 32
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.86 E-value=8.5e-20 Score=170.25 Aligned_cols=248 Identities=13% Similarity=0.052 Sum_probs=166.9
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
.+.++++.+........+.......+++++.|+++||+|||+++..+.++.++..... ..++++.++..|++.|++.+.
T Consensus 16 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~ 95 (377)
T PRK11102 16 VIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAA 95 (377)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 3344554443333333566667778889999999999999999999998887776654 678888889999999999999
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
.++...+++.++. |+++|+++.++.+....+|..+|+.+++.+... .+||.. |.+...+.++..
T Consensus 96 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~-~~~~~~~~~~~~ 159 (377)
T PRK11102 96 ASVVINALMRDMF----------PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVW-----FSWHAI-FWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cChHHH-HHHHHHHHHHHH
Confidence 9888888888886 788999999999999999999999998777543 468773 444444444433
Q ss_pred H-HHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-cccCcch
Q 020422 208 I-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSG 285 (326)
Q Consensus 208 i-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 285 (326)
+ ..+++||++++++++ +.+.++..++..+.+++++.+...............+....+..+.. .+.+.++
T Consensus 160 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 160 ALVFFFIPETLPKERRQ--------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred HHHHHhCCccCcccccC--------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 3 345667654322111 11112223344466778877654433222211111111111222222 3556678
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 286 VGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 286 ~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
.+......+++..++..+.|++.|| ||+.+..+.+
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~ 268 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLW 268 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 8999999999999999999999999 6665555443
No 33
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.86 E-value=1.8e-19 Score=170.03 Aligned_cols=237 Identities=11% Similarity=0.100 Sum_probs=146.2
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh----h-hhhhHHHHHHHHHhhhh
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----L-FPSWYTMVPASLYLGFA 124 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~----~-~~~~~~l~~~r~l~G~g 124 (326)
+.++.+.+.+......+....++.+++++.|++.||+|||+++..+..++++..+.. . .++++.++..|.+.|++
T Consensus 39 ~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g 118 (402)
T TIGR00897 39 FLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLG 118 (402)
T ss_pred HHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcc
Confidence 334444333222223455666778889999999999999999999988877655432 2 35788888899999999
Q ss_pred hHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhH-HHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHH
Q 020422 125 ASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ-FVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVI 203 (326)
Q Consensus 125 ~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~-~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~ 203 (326)
.+...+....++.++. |+++||+++|++..+.+.|. .+|++++..+... .+|+...+ ......
T Consensus 119 ~~~~~~~~~~~~~~~~----------~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~-----~g~~~~~~-~~~~~~ 182 (402)
T TIGR00897 119 YPLFAYSFLVWVVYNT----------KQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA-----FGEMNTLW-SALAFV 182 (402)
T ss_pred hHHHHhHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----cchHHHHH-HHHHHH
Confidence 9887777666777765 78899999999999999986 5788887665433 34433222 222222
Q ss_pred HHHHHHH-HhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-ccc
Q 020422 204 TLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PAL 281 (326)
Q Consensus 204 ~l~~il~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~ 281 (326)
.++.++. ++.++++++++++ + +.+..+..+...+.+|+|+++......+...... +....+.|.+.+ .+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~g~ 254 (402)
T TIGR00897 183 LTGGVIALFSNKDIFTPQHMQ-T------REKFSELGKAATILFTNPNVLLGGMVRIINTIGL-FGFAVFLPMFVAELGF 254 (402)
T ss_pred HHHHHHHHhccCCCCCccccc-C------CcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCC
Confidence 2223333 3344432211111 0 0011111122335678888876554433222221 111123344432 345
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 282 GVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 282 ~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
+.++.+......+++..+++++.|+++||
T Consensus 255 s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 283 (402)
T TIGR00897 255 STSEWLQIWGTFFFTNIVFNVIFGIVGDK 283 (402)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55567777788889999999999999999
No 34
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.86 E-value=1.2e-19 Score=174.77 Aligned_cols=249 Identities=11% Similarity=0.011 Sum_probs=151.6
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h------------hhhhHHHHHHHHHhhhhhHHHHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L------------FPSWYTMVPASLYLGFAASIIWV 130 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~------------~~~~~~l~~~r~l~G~g~g~~~~ 130 (326)
..+..+++..+++++.|+++||+|||++++.+.+++.+..+.. + .+++..++++|+++|++.|..++
T Consensus 60 ~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~ 139 (479)
T PRK10077 60 CVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASM 139 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhh
Confidence 4566777888999999999999999999999988876655432 2 12356778999999999999999
Q ss_pred hhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHH
Q 020422 131 GEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 131 ~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
...++++|++ |+++||+++++...+..+|..++++++..+..... ....+||+. |++.++..++..
T Consensus 140 ~~~~~i~e~~----------~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~-f~~~~~~~~~~~ 208 (479)
T PRK10077 140 LSPMYIAEIA----------PAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYM-FASEAIPALLFL 208 (479)
T ss_pred HHHHHHHhhC----------ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHH-HHHHHHHHHHHH
Confidence 9999999997 88999999999998888998888777665543211 124689874 545555555555
Q ss_pred HHHHhccCCccc----ccccccc-ccch--hhchHHHHHHHHHHhhh-----cchhHHHHHHHHHh-----hHHHHH---
Q 020422 208 ILMCFLRKEEDK----GEKETAD-ASVN--FYSYLVSLSKSITTLLA-----DVRMLLIIPLFAYS-----GLQQAF--- 267 (326)
Q Consensus 208 il~~~l~~~~~~----~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~~~~-----g~~~~~--- 267 (326)
+..+++||+++. .++++.+ ..++ +....++..++..+..+ .++.+......+.. .+....
T Consensus 209 ~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (479)
T PRK10077 209 MLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGIN 288 (479)
T ss_pred HHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChh
Confidence 556778886542 1111000 0000 00000111111111111 11111111111111 111110
Q ss_pred hhhccccccc-ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhh
Q 020422 268 VWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHL 323 (326)
Q Consensus 268 ~~~~~~~~~~-~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~ 323 (326)
....+.|.+. ..+.+.+...+.....+++..+++++.|+++|| ||++++.+.++..
T Consensus 289 ~~~~~~p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~ 347 (479)
T PRK10077 289 VVLYYAPEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMA 347 (479)
T ss_pred HHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHH
Confidence 0111223332 223333445666677888899999999999999 7877777765544
No 35
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.86 E-value=3.1e-20 Score=172.58 Aligned_cols=244 Identities=11% Similarity=0.050 Sum_probs=161.6
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHH
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~ 128 (326)
++++++.+........+...+...+++++.|+++||+|||+++..+.+++++..... +.++++.++++|++.|++.+..
T Consensus 20 ~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 99 (399)
T TIGR00893 20 LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPF 99 (399)
T ss_pred HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhh
Confidence 344444333332334566667778889999999999999999999998887776664 6789999999999999999999
Q ss_pred HhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 020422 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (326)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i 208 (326)
++....++.|+. |+++|++++++.....++|..+|+.+++.+... .+||+. |....+..++..+
T Consensus 100 ~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~~~~~-~~~~~~~~~~~~~ 163 (399)
T TIGR00893 100 FPGIILIVASWF----------PASERATAVSIFNSAQGLGGIIGGPLVGWILIH-----FSWQWA-FIIEGVLGIIWGV 163 (399)
T ss_pred hhHHHHHHHHhC----------CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh-----CCchHH-HHHHHHHHHHHHH
Confidence 999999999987 888999999999999999999999998876553 368873 4444444444333
Q ss_pred H-HHhccCCcccccccc--cc-c-cch------hhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccc
Q 020422 209 L-MCFLRKEEDKGEKET--AD-A-SVN------FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (326)
Q Consensus 209 l-~~~l~~~~~~~~~~~--~~-~-~~~------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 277 (326)
+ .++.||++++++... ++ . ... ++.+.++...+..+.+++|+++......+.......... .+.+.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 242 (399)
T TIGR00893 164 LWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFL-TWFPTYL 242 (399)
T ss_pred HhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 3 344555443211100 00 0 000 000000011223456778887766554443333322222 2233332
Q ss_pred cc--ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 278 TP--ALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 278 ~~--~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.+ +.+..+.++.....++++.++.++.|+++||
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 277 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDL 277 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 3445577888888899999999999999999
No 36
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.86 E-value=2.9e-19 Score=168.30 Aligned_cols=274 Identities=13% Similarity=0.070 Sum_probs=162.4
Q ss_pred ccccCccccchhHHHHHHHHHHHHHHHHhHH----hhhhhhcCCCCch-----hHHHHHHHHHHhhhhhhHHHHHHHhch
Q 020422 18 LQVLTPKNYTRDVHILSCAFLLIFLAYGAAQ----NLETTVNTEGNLG-----TISLGILYTSFTCFSLVASLVVRVLGS 88 (326)
Q Consensus 18 ~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~----~l~~~l~~~~~~g-----~~~~~~~~~~~~~~~l~~g~l~d~~Gr 88 (326)
++|.||++ +...+.++.++...++.... .+.++++.+.+.. ....++.++...+++++.|+++||+||
T Consensus 7 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 83 (408)
T PRK09874 7 DTPINWKR---NLTVAWLGCFLTGAAFSLVMPFLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGR 83 (408)
T ss_pred CCCCcHHH---HHHHHHHHHHHHHHHHHHhhhhHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence 56677755 44444444444433333222 2333443332211 122455566778889999999999999
Q ss_pred hhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHH
Q 020422 89 KNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (326)
Q Consensus 89 r~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~ 167 (326)
|+++..+.+..++..... ..++++.+++.|++.|++.+ ..+....++.+.. |+++|+++.|+...+..
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~ 152 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQV----------PRNKSGWALGTLSTGGV 152 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhc----------CHhhhhHHHHHHHHHHH
Confidence 999999888777665554 67788889999999999865 4455556666654 78899999999999999
Q ss_pred HhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccccccccccchhhchHHHHHHHHHHhh
Q 020422 168 SHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLL 246 (326)
Q Consensus 168 ~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (326)
.|..+|+.+++.+... .+||.. |++..++.++..++ .+++||+.++.+++ +..+ .++..+.+
T Consensus 153 ~g~~~~~~~~~~l~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~----~~~~~~~~ 215 (408)
T PRK09874 153 SGALLGPLAGGLLADS-----YGLRPV-FFITASVLFLCFLVTLFCIRENFQPVSKK-------EMLH----MREVVTSL 215 (408)
T ss_pred HHHHHHHHHHHHHHHH-----hCHHHH-HHHHHHHHHHHHHHHHHHhccCcccccch-------hhhH----HHHHHHhC
Confidence 9999999998877543 368763 54555544444333 34566643211110 0111 12334566
Q ss_pred hcchhHHHH-HHHHHhhHHHHHhhhcccccccccccCcc----hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 247 ADVRMLLII-PLFAYSGLQQAFVWAEFTKEIVTPALGVS----GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 247 ~~~~~~~l~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
++++.+... ...+............++.+..+...+.+ ..+......+++..++....|+++|| ||+.+..+.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~ 295 (408)
T PRK09874 216 KNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITAL 295 (408)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHH
Confidence 777765422 21111111111111112211111111112 23555566788888899999999999 666665555
Q ss_pred HHh
Q 020422 320 VFH 322 (326)
Q Consensus 320 ~~~ 322 (326)
++.
T Consensus 296 ~~~ 298 (408)
T PRK09874 296 IFS 298 (408)
T ss_pred HHH
Confidence 443
No 37
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.85 E-value=4e-19 Score=165.81 Aligned_cols=232 Identities=9% Similarity=-0.012 Sum_probs=145.5
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhh-hhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-FPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~-~~~~~~l~~~r~l~G~g~g~ 127 (326)
.++++++.+.+.-....+..+.++++++++.|+++||+|||+++..+............ .+++..++..|+++|+|++.
T Consensus 16 ~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~ 95 (368)
T TIGR00903 16 LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF 95 (368)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH
Confidence 55566665533322335677788899999999999999999887655444433333233 37899999999999999996
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
. ......++++. |+++|++++++...+..+|..++++++..+.+. .+||.. |.+.++++++..
T Consensus 96 ~-~~~~~~~~~~~----------~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~-----~gWr~~-f~~~~~l~~~~~ 158 (368)
T TIGR00903 96 L-LNAFAPAASQI----------REERRDLVISLLSFAMYLGIIFALAAGLKIYTA-----GGLQLL-IIPIAAVAAAGI 158 (368)
T ss_pred H-HHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cchHHH-HHHHHHHHHHHH
Confidence 4 44445567765 889999999999999999999999998887653 589974 544455554433
Q ss_pred -HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchH
Q 020422 208 -ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGV 286 (326)
Q Consensus 208 -il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 286 (326)
+..+++||+++++++.. +.. +..++.++.+|||.++.+....++.........++.++.+.+.+.+.+ .
T Consensus 159 ~~~~~~lp~~p~~~~~~~------~~~---~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~-~ 228 (368)
T TIGR00903 159 ILVLAALPALPFQAAEGF------GFK---DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI-A 228 (368)
T ss_pred HHHHHHcCCCCCCCCCCc------chH---HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH-H
Confidence 34467788654321110 000 111234567888888876655443322222223333333322234433 4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 287 GGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 287 g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
+.......+++.++ .++++||
T Consensus 229 ~~~~~l~~~~g~~g---~~~~~d~ 249 (368)
T TIGR00903 229 GDAVALAILAGLIG---VAVIPDR 249 (368)
T ss_pred HHHHHHHHHHHHHH---HHHhhHH
Confidence 54455545544554 4677776
No 38
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=5.3e-19 Score=166.10 Aligned_cols=244 Identities=11% Similarity=0.055 Sum_probs=161.4
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
.+.++++.+........+.....+.+++++.|+++||+|||++++.+.+++++..... ..+++..+++.|+++|++.+.
T Consensus 28 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~ 107 (392)
T PRK10473 28 RIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGC 107 (392)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhH
Confidence 3344444333222233555666778889999999999999999999988887766654 677888888899999999999
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
.++...+++.+.. |+++|+++.++.+....++..+|++++..+... .+||.. |.+..++.++..
T Consensus 108 ~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~-----~g~~~~-~~~~~~~~~i~~ 171 (392)
T PRK10473 108 CYVVAFAILRDTL----------DDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLK-----FPWQSL-FYTMAAMGILVL 171 (392)
T ss_pred HHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----cChHHH-HHHHHHHHHHHH
Confidence 9988888888886 788999999999999999999999888776543 468863 444444444433
Q ss_pred H-HHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcc
Q 020422 208 I-LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVS 284 (326)
Q Consensus 208 i-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~ 284 (326)
+ ..+++||++++++++ +.+. .++..+.+++++++...............+. .+.+.+.. .+.+..
T Consensus 172 ~~~~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~ 239 (392)
T PRK10473 172 LLSLFILKETRPARAPA--------ASSK---PRENSESLLNRFFLSRLVITTLSVTVILTFV-NTSPVLLMEQMGFSRG 239 (392)
T ss_pred HHHHHHcCCCCCcccCC--------ccch---HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-HhCHHHHHHHcCCCHH
Confidence 3 345567654322111 0011 1222355677776653332221111111111 22232222 245556
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
+.+..+...+++..++..+.|++.|| ||+.+..+.+
T Consensus 240 ~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~ 277 (392)
T PRK10473 240 EYAIIMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQV 277 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 77888888999999999999999999 6666665554
No 39
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.85 E-value=4.6e-20 Score=176.04 Aligned_cols=138 Identities=14% Similarity=0.065 Sum_probs=106.8
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh---hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
..+..+++..+++++.|+++||+|||++++.+.+++++..+.. .. .+++.+++.|++.|++.+..++....+++++
T Consensus 76 ~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~ 155 (481)
T TIGR00879 76 VVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEI 155 (481)
T ss_pred HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHcc
Confidence 4567777888999999999999999999999998887766543 32 2445788899999999999999888889888
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH---HHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT---LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~---~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
. |+++|+++.+++..+..+|..+|++++ .... ...+||+. |++.....++..+..+++||+
T Consensus 156 ~----------~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~-----~~~~w~~~-f~~~~~~~~~~~~~~~~l~~~ 219 (481)
T TIGR00879 156 A----------PKALRGALTSLYQLAITFGILVAYGFGSGKVSLN-----NTLGWRIP-LGLQLIPAGLLFLGLFFLPES 219 (481)
T ss_pred C----------ChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCC-----CCccHHHH-HHHHHHHHHHHHHHHhcCCCC
Confidence 6 889999999999999999999999887 2221 13589874 444444444444555677775
Q ss_pred c
Q 020422 217 E 217 (326)
Q Consensus 217 ~ 217 (326)
+
T Consensus 220 ~ 220 (481)
T TIGR00879 220 P 220 (481)
T ss_pred h
Confidence 4
No 40
>PRK03699 putative transporter; Provisional
Probab=99.85 E-value=2.9e-19 Score=168.26 Aligned_cols=261 Identities=14% Similarity=0.021 Sum_probs=160.8
Q ss_pred hhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCch----hHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH
Q 020422 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLG----TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (326)
Q Consensus 28 ~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g----~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~ 103 (326)
|-.+...+++++........+.+.+++.++.+.+ ....+...+++.+++++.|++.||+|||+++..+.++.++..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 86 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAV 86 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4444554554444333344444334443332222 223455667788889999999999999999999988877766
Q ss_pred HHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 104 ~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
... +.++++.++++|.++|++.|..++....++.+.. |+++|+++.+.......+|..+++.+...+..
T Consensus 87 ~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 156 (394)
T PRK03699 87 AGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVY----------EGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLA 156 (394)
T ss_pred HHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhc----------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 654 6788988999999999999988887778888875 77889999998888888888888888766543
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhh
Q 020422 183 DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 262 (326)
Q Consensus 183 ~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 262 (326)
. ..+||+. |.+..++.++..++.++.+.|+.+++++ + +++.. . +...+++++......+...
T Consensus 157 ~----~~gw~~~-f~~~~~~~~~~~~~~~~~~~p~~~~~~~-~----~~~~~----~----~~~~~~~~~~~~~~~~~~~ 218 (394)
T PRK03699 157 R----SIEWYWV-YACIGLVYVAIFILTLFSEFPALGKHAP-K----ADKPV----A----KEKWGIGVLFLAIAALLYI 218 (394)
T ss_pred c----cccHHHH-HHHHHHHHHHHHHHHHhcCCccccccCc-c----ccCcc----c----cccCChHHHHHHHHHHHHH
Confidence 2 2479874 4444444433333333322222111111 0 00000 0 1112344444333322222
Q ss_pred HHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhH
Q 020422 263 LQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGL 317 (326)
Q Consensus 263 ~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~ 317 (326)
....... .+.|.+.. .+++.++.+.....+.++..+|.++.|+++|| ||+.+..
T Consensus 219 ~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~ 276 (394)
T PRK03699 219 LAQLTFI-SWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTV 276 (394)
T ss_pred HHHHHHH-HHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHH
Confidence 2111112 23344432 25566678888888889999999999999999 5444443
No 41
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.85 E-value=5.3e-19 Score=170.34 Aligned_cols=254 Identities=9% Similarity=-0.037 Sum_probs=166.0
Q ss_pred hhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHH
Q 020422 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIW 129 (326)
Q Consensus 51 ~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~ 129 (326)
.++++.+.+...+..+....+..++.++.|++.||+|||+++..+.+++++..... ..+|+..+++.|+++|++.+..+
T Consensus 29 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~ 108 (485)
T TIGR00711 29 AGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLI 108 (485)
T ss_pred HHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHH
Confidence 33444333322333556666778888999999999999999999999888877654 78899999999999999999999
Q ss_pred hhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH-
Q 020422 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI- 208 (326)
Q Consensus 130 ~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i- 208 (326)
+...+++.++. |+++|+++.+++.....+|..+|+.+++.+... .+||+. |++...+.++..+
T Consensus 109 ~~~~~~i~~~~----------~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~-----~~w~~~-f~~~~~~~~~~~~~ 172 (485)
T TIGR00711 109 PLSFSTLLNIY----------PPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN-----YHWRWI-FLINVPIGIIVVVV 172 (485)
T ss_pred HHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC-----cCceeh-hhhhhHHHHHHHHH
Confidence 99899999987 888999999999999999999999998877543 479874 4444444444333
Q ss_pred HHHhccCCccccccccccc----------------cchhhchHH---------------------HHHH-----HHHHhh
Q 020422 209 LMCFLRKEEDKGEKETADA----------------SVNFYSYLV---------------------SLSK-----SITTLL 246 (326)
Q Consensus 209 l~~~l~~~~~~~~~~~~~~----------------~~~~~~~~~---------------------~~~~-----~~~~~~ 246 (326)
..+++||++++++++.+.. ...++..+. .+.+ ...+.+
T Consensus 173 ~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (485)
T TIGR00711 173 AFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLF 252 (485)
T ss_pred HHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHH
Confidence 3345665433211110000 000000000 0000 012456
Q ss_pred hcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 247 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 247 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
|+++++......+..++.... ...+.|.+..+ +.+..+.++.+...+++..+++++.|++.|| ||+++..|.++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~ 330 (485)
T TIGR00711 253 KYRNFTIGCVYMSLLGLGLYG-SFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLIL 330 (485)
T ss_pred cCCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Confidence 677766654433333322111 11233433332 4556678999999999999999999999999 66666666543
No 42
>TIGR00895 2A0115 benzoate transport.
Probab=99.84 E-value=5e-19 Score=165.26 Aligned_cols=233 Identities=14% Similarity=0.081 Sum_probs=146.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+....+..+++++.|+++||+|||+++..+.++.++..... ..++++.+++.|++.|++.+..++...+++.++.
T Consensus 58 ~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 134 (398)
T TIGR00895 58 FSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYA--- 134 (398)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHc---
Confidence 345556667888999999999999999999988777766554 6788888889999999999999999899999986
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHH-HHHHHHHhccCCccc---
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVIT-LGTILMCFLRKEEDK--- 219 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~-l~~il~~~l~~~~~~--- 219 (326)
|+++|+++.++...+..+|..+|+.+++.+... .+|+.. |.+.+++.. ...+...++||+++.
T Consensus 135 -------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T TIGR00895 135 -------PKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV-----FGWRSL-FYVGGIAPLLLLLLLMRFLPESIDFLVS 201 (398)
T ss_pred -------CHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc-----ccceee-hhhhhhHHHHHHHHHHHhCCCCChHHHh
Confidence 778999999999999999999999988777543 468763 433333333 333445567765421
Q ss_pred cccccc---------------cccchhhchHHHHHHHHHHhhhc----chhHHHHHHHHHhhHHHHHhhhccccccc-cc
Q 020422 220 GEKETA---------------DASVNFYSYLVSLSKSITTLLAD----VRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TP 279 (326)
Q Consensus 220 ~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~ 279 (326)
++++.. +...++.....+..++..+.+++ ++.+.+....+.......... .+.|.+. ..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 280 (398)
T TIGR00895 202 KRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLT-NWLPKLMVEL 280 (398)
T ss_pred cCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHc
Confidence 100000 00000000000011122222222 222222111111111111111 2233322 23
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhH
Q 020422 280 ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLL 314 (326)
Q Consensus 280 ~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~ 314 (326)
+.+.++.+......+++..++.++.|+++|| ||+.
T Consensus 281 g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (398)
T TIGR00895 281 GFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT 317 (398)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 4556678888888999999999999999999 5533
No 43
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.84 E-value=1.3e-18 Score=168.51 Aligned_cols=276 Identities=11% Similarity=0.037 Sum_probs=169.7
Q ss_pred cccCccccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHH-HHHH-hhhhhhHHHHHHHh-----chhhH
Q 020422 19 QVLTPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGIL-YTSF-TCFSLVASLVVRVL-----GSKNA 91 (326)
Q Consensus 19 ~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~-~~~~-~~~~l~~g~l~d~~-----Grr~~ 91 (326)
+|+||.+.+|...++.+++............+...+. +.+.+....+.. .... .+++++.++++||+ |||+.
T Consensus 4 ~~l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~-~~g~~~~~ig~~~~~~~~~~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 4 QYLRIFQQPNSAILLILGFASGLPLALTSGTLQAWMT-VENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred hHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCCCchH
Confidence 4889999889888888876555444433333333332 323333222222 1122 25789999999999 99986
Q ss_pred -HHHHhHHHHHHHHHh-h---hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHH
Q 020422 92 -LILGTTGYWLFVAAN-L---FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF 166 (326)
Q Consensus 92 -l~~g~~~~~~~~~~~-~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~ 166 (326)
++.+.+..++..... + .++++.+.+.+++.|++.+...+...++..|+. |++|||++.++...+.
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~----------~~~~rg~~~~i~~~g~ 152 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVL----------PAEERGAGAAISVLGY 152 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------ChhhhHHHHHHHHHHH
Confidence 556666555544332 3 246777888899999999998888888999986 7899999999999999
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhh
Q 020422 167 ASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLL 246 (326)
Q Consensus 167 ~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (326)
.+|..+|+.++..+... ..+||.. |++.++..++..+..+++||++++++++ + +.+.+.. ++..+.+
T Consensus 153 ~lG~llg~~l~~~l~~~----~~GWr~~-f~i~a~l~ll~~l~~~~~~e~~~~~~~~-~----~~~~~~~---~~l~~~~ 219 (491)
T PRK11010 153 RLAMLVSGGLALWLADR----YLGWQGM-YWLMAALLIPCIIATLLAPEPTDTIPVP-K----TLEQAVV---APLRDFF 219 (491)
T ss_pred HHHHHHHHHHHHHHHhc----ccCHHHH-HHHHHHHHHHHHHHHHhcCCCccccccc-c----chhhhHH---HHHHHHH
Confidence 99999998888777542 1479874 5555555555555555677764321111 0 0011111 2233455
Q ss_pred hcchhHHHHHHHHHhhHHHHHhhhccccccc-ccccCcchHHHHHHHH-HHHHHHHHHHhhhhhhh--hhhHHhHH
Q 020422 247 ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV-TPALGVSGVGGAMAVY-GAFDAISLLGFATFFSV--HSLLVGLP 318 (326)
Q Consensus 247 ~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~-gi~~~~g~~~~G~l~Dr--R~~~~~~g 318 (326)
++++.+......+.......+.....++.+. ..+.+.++.++..... .++.++|.+++|+++|| ||+.++.+
T Consensus 220 ~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~ 295 (491)
T PRK11010 220 GRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIF 295 (491)
T ss_pred cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 6666654433322222222222222333332 2355667788877544 46888999999999999 54444433
No 44
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.84 E-value=2.3e-19 Score=164.91 Aligned_cols=227 Identities=15% Similarity=0.143 Sum_probs=147.0
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
..+.......+++++.|+++||+|||+++..+.++.++.... .++++.+.++++|++.|++.+..+++...++.++.
T Consensus 37 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~-- 114 (352)
T PF07690_consen 37 LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWF-- 114 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccc--
Confidence 355566677888999999999999999999999888777433 34477778899999999999999999999999986
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGE 221 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~~ 221 (326)
|+++|+++.++.....++|..+|+.+++.+.+. .+||+. |++.+++.++..++ .+++++++++++
T Consensus 115 --------~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~-----~~~~~~-~~~~~~~~~~~~il~~~~~~~~~~~~~ 180 (352)
T PF07690_consen 115 --------PPEERGRAFGILSAGFSLGSILGPLLGGFLISY-----FGWRWA-FLISAILSLIAAILFILFLPEPPPPRE 180 (352)
T ss_dssp --------CTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH-----CHHCCH-HHHHHHHHHHHHHHHHCCC---STTTT
T ss_pred --------hhhhhhhccccccchhhhhhhcccchhhhhhhc-----cccccc-cccccchhhhhhhhHhhhhhhcccccc
Confidence 778999999999999999999999998887633 468874 55555555555443 244555443322
Q ss_pred cccccccchhhchHHHHHHH-HHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccC-cchHHHHHHHHHHHH
Q 020422 222 KETADASVNFYSYLVSLSKS-ITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALG-VSGVGGAMAVYGAFD 297 (326)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~-~~~~g~~~~~~gi~~ 297 (326)
++.++.++ ...++.+++ ..+..+++.++......+..++...... .+.+.+.. .+.+ ..+.+..+...++..
T Consensus 181 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (352)
T PF07690_consen 181 RESPKESE---SKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFS-FFLPLYLQEVLGFSGPSQAGLLFSIFGIVG 256 (352)
T ss_dssp --SSTTTT-----HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHH-HHHHHHCCHHHHCCTHHHHHHHHHHHHHHH
T ss_pred cccccccc---cccccccccccccccccchhhhhhhhhhHHHHHHHHhh-cccchhhhhccCCCHHHHHHHHHHHHHHHH
Confidence 21111000 000111111 2233445555422222222222211111 22233222 2344 456788888889999
Q ss_pred HHHHHHhhhhhhh
Q 020422 298 AISLLGFATFFSV 310 (326)
Q Consensus 298 ~~g~~~~G~l~Dr 310 (326)
.+++.+.|+++||
T Consensus 257 ~~~~~~~~~l~~~ 269 (352)
T PF07690_consen 257 IIGSLLAGRLSDR 269 (352)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999999
No 45
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.84 E-value=7.3e-19 Score=168.52 Aligned_cols=227 Identities=10% Similarity=-0.033 Sum_probs=145.9
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh----hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF----PSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~----~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
.+...+.+++++++.|+++||+|||++++.+.+++++..... +. ++++.++..|++.|++.|..++.....+.++
T Consensus 69 ~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~ 148 (452)
T PRK11273 69 LSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHW 148 (452)
T ss_pred HHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHh
Confidence 566667778899999999999999999999998877766543 32 3677788899999999998888777777776
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHhHH-HHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCc
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQF-VGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEE 217 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~-~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~ 217 (326)
+ |+++||+++|+++.+.++|.. .+++++..+... .+||+. |++..++.++ ..+..+++||++
T Consensus 149 ~----------~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-----~gw~~~-f~i~~~~~~~~~~l~~~~~~~~~ 212 (452)
T PRK11273 149 W----------SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWF-----NDWHAA-LYMPAFAAILVALFAFAMMRDTP 212 (452)
T ss_pred C----------ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHh-----ccHHHH-HHHHHHHHHHHHHHHHHHccCCH
Confidence 5 788999999999888888864 455544333221 378874 5444444444 334456677754
Q ss_pred ccc---cc-c-ccccc----c--hhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcc
Q 020422 218 DKG---EK-E-TADAS----V--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVS 284 (326)
Q Consensus 218 ~~~---~~-~-~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~ 284 (326)
++. ++ + .++.+ . .++.+.++.+. ...+|++.++......++......... .+.|.+.. .+++.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~P~~l~~~~g~s~~ 289 (452)
T PRK11273 213 QSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFM--QYVLPNKLLWYIAIANVFVYLLRYGIL-DWSPTYLKEVKHFALD 289 (452)
T ss_pred hhcCCCChhhhhhccccccccccCCCccHHHHHH--HHHHcChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCHH
Confidence 421 00 0 00000 0 00111222111 135678888775544333332222222 23444433 245566
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
..+.....++++..++.++.|+++||
T Consensus 290 ~~~~~~~~~~~~~~~g~~~~G~l~dr 315 (452)
T PRK11273 290 KSSWAYFLYEYAGIPGTLLCGWMSDK 315 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888889999999999999998
No 46
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.84 E-value=1.4e-18 Score=163.60 Aligned_cols=229 Identities=10% Similarity=0.013 Sum_probs=149.5
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+...+.+++.+++.|+++||+|||++++.+.+++++..+.. ..++. +..|+++|++.+..+|+..+++.|+.
T Consensus 44 ~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~--- 117 (393)
T PRK11195 44 QMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELL--- 117 (393)
T ss_pred HHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 455567788899999999999999999999998887766543 44443 56899999999999999999999997
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKE 223 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~ 223 (326)
|+++|+++.|+.....+.|..+||.+++.+... .|+.. +.+...+..++.+..+.+||+++++++.
T Consensus 118 -------~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~------~~~~~-~~i~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (393)
T PRK11195 118 -------PGEKLVKANGWMEGSTIAAILLGTVLGGALADP------HAEAA-LAVCALIYLLAALFNLFIPRLGARRPGQ 183 (393)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHH-HHHHHHHHHHHHHHHhcCCCCccccccc
Confidence 889999999999999999999999999888642 24442 3333333333444446677754322111
Q ss_pred cccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHh-hHHHHH--hhhcccccccccccCcchHHHHHHHHHHHHHHH
Q 020422 224 TADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAF--VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAIS 300 (326)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-g~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g 300 (326)
+. +.....++...+..+.+++|.+.......... +..... ....|.+.. .+.+..+.|+.+...+++..++
T Consensus 184 ~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--lg~s~~~~G~~~~~~~~g~i~g 257 (393)
T PRK11195 184 SW----NPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVA--LGITLNQPAYLQAVVAIGIAVG 257 (393)
T ss_pred CC----CHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCChhHHHHHHHHHHHHHHHH
Confidence 00 00001111112223456777765433222111 111111 111122221 2455668899999999999999
Q ss_pred HHHhhhhhhh--hhhHHhHHH
Q 020422 301 LLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 301 ~~~~G~l~Dr--R~~~~~~g~ 319 (326)
+++.+++.|| +++.+..|.
T Consensus 258 ~~~~~~l~~~~~~~~~~~~g~ 278 (393)
T PRK11195 258 AGAAARLVTLETVLRVLPAGI 278 (393)
T ss_pred HHHHHHHhcCCcccchHHHHH
Confidence 9999999998 444444443
No 47
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.84 E-value=1.3e-19 Score=167.92 Aligned_cols=244 Identities=12% Similarity=0.027 Sum_probs=157.2
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHH
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~ 128 (326)
++++++.+........+...+...+++++.|+++||+|||+++..+.++.++..+.. +.++++.+++.|++.|++.+..
T Consensus 21 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 100 (379)
T TIGR00881 21 LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMG 100 (379)
T ss_pred HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcccc
Confidence 334444333333333566667778889999999999999999999998887776654 6789999999999999999999
Q ss_pred HhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHH-HHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-H
Q 020422 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKGGSTSGTTLLFIVFLGVITL-G 206 (326)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~-li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~ 206 (326)
++...+++.++. |+++|+++.++...+..+|..+|+ +++..+... .+||.. |.+..++.++ +
T Consensus 101 ~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~ 164 (379)
T TIGR00881 101 WPPCGRTVTKWF----------SRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL-----YSWHWV-FIVPGIIAIIVS 164 (379)
T ss_pred CCchHHHHHHhc----------CHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----CCchhH-HHHHHHHHHHHH
Confidence 999888999987 788999999999999999999998 455554332 478874 4444444433 3
Q ss_pred HHHHHhccCCccccc---ccc--ccc----cchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccc
Q 020422 207 TILMCFLRKEEDKGE---KET--ADA----SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (326)
Q Consensus 207 ~il~~~l~~~~~~~~---~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 277 (326)
++..++.+|++++++ .+. .+. .++++.+.........+.+++|.++.+....+.......... .+.+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 243 (379)
T TIGR00881 165 LICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGIL-DWSPLYL 243 (379)
T ss_pred HHHheeeCCCccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 333445565433211 000 000 000000000000112345677887765544333322222222 2223332
Q ss_pred c--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 278 T--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 278 ~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
. .+.+..+.+......+++..++.++.|+++||
T Consensus 244 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r 278 (379)
T TIGR00881 244 TQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDK 278 (379)
T ss_pred HHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHH
Confidence 2 24555678888889999999999999999997
No 48
>PRK11043 putative transporter; Provisional
Probab=99.83 E-value=4e-18 Score=160.57 Aligned_cols=232 Identities=11% Similarity=0.029 Sum_probs=151.7
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHH
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASII 128 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~ 128 (326)
++++++.+........++....+.+++++.|+++||+|||+++..+.++.++..... +.++++.+++.|+++|++.+..
T Consensus 32 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~ 111 (401)
T PRK11043 32 IQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSA 111 (401)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHH
Confidence 344444433333334566677788999999999999999999999888777665544 6788888899999999999887
Q ss_pred HhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 020422 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (326)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i 208 (326)
.+...+++.+.. |++++++..+.......++..+|+.+++.+... .+||.. |.+..+..++..+
T Consensus 112 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g~~~~-~~~~~~~~~~~~~ 175 (401)
T PRK11043 112 AVIWQALVIDRY----------PAQKANRVFATIMPLVALSPALAPLLGAWLLNH-----FGWQAI-FATLFAITLLLIL 175 (401)
T ss_pred HHHHHHHHHHhc----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----CChHHH-HHHHHHHHHHHHH
Confidence 776666676665 778888999988888889999999998777543 478874 4444444544444
Q ss_pred HHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchHHH
Q 020422 209 LMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGG 288 (326)
Q Consensus 209 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 288 (326)
+.++++|++++++++ ++ + ++.++.+|+++++.....+.........+....+..+...+.+.++.++
T Consensus 176 ~~~~~~~~~~~~~~~------~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~ 242 (401)
T PRK11043 176 PTLRLKPSKKARKQS------QD----A---LTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIGL 242 (401)
T ss_pred HHHHcCCCCCccccc------hH----H---HHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHHH
Confidence 445555533221110 01 1 1233556777766543322222111111111222222223455567788
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh
Q 020422 289 AMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 289 ~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.+....++..+|+.+.+++.||
T Consensus 243 ~~~~~~~~~~~g~~~~~~l~~r 264 (401)
T PRK11043 243 SYVPQTIAFLVGGYGCRAALQK 264 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888888999999999999
No 49
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.83 E-value=4.4e-19 Score=170.50 Aligned_cols=227 Identities=9% Similarity=-0.080 Sum_probs=153.1
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
.+..+.++.+++++.|+++||+|||+++..+.+++++..+.. . .+++..+++.|+++|++.+..++....++.++.
T Consensus 82 ~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~- 160 (465)
T TIGR00894 82 LSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWA- 160 (465)
T ss_pred HHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcC-
Confidence 455666778889999999999999999999998887776553 2 345777888999999999999999999999986
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH-hccCCcccc
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKG 220 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~-~l~~~~~~~ 220 (326)
|+++|+++.|++..+.++|..+|+++.+.+.... .+||.. |.+.++..++..++++ +.+|++++.
T Consensus 161 ---------~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~----~gw~~~-f~i~~~~~~~~~~~~~~~~~~~p~~~ 226 (465)
T TIGR00894 161 ---------PPKERSRLLGMSTSGFQLGTFIFLPISGWLCESW----GGWPMI-FYVFGIVGCAWSLLWFVFPADDPSIH 226 (465)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----CCCCee-hhhhhHHHHHHHHHHHHHhcCCcccC
Confidence 8899999999999999999999999987775431 279874 5455555544433333 344433211
Q ss_pred c-cccccc-------cchh-hchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcchHHHH
Q 020422 221 E-KETADA-------SVNF-YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGA 289 (326)
Q Consensus 221 ~-~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~ 289 (326)
+ .++++. ++++ +.+.+ ....+.++++.++......+.......... .+.|.+..+ +.+..+.++.
T Consensus 227 ~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~l~~~~g~s~~~~g~~ 302 (465)
T TIGR00894 227 PCISKFEKKYINSSLQGQKGSTRQS---LPIKAIPKSLPVWAIWFAIFGHFWLYTILP-TYLPTFISWVLRVSGKENGLL 302 (465)
T ss_pred CCCCHHHHHHHHhhcccccCCCCCC---CCHHHHhcCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCcChHHhHHH
Confidence 1 100000 0000 00000 113356777887766554433322222222 233444322 4556678888
Q ss_pred HHHHHHHHHHHHHHhhhhhhh
Q 020422 290 MAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 290 ~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.....++..++.+++|+++||
T Consensus 303 ~~~~~~~~~i~~~~~g~l~d~ 323 (465)
T TIGR00894 303 SSLPYLFAWLCSIFAGYLADF 323 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 888899999999999999997
No 50
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.83 E-value=6.2e-18 Score=158.96 Aligned_cols=233 Identities=11% Similarity=0.026 Sum_probs=150.7
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
.+.++++.+........+.....+.+++++.|+++||+|||+++..+.++..+..... ..++++.+++.|++.|++.+.
T Consensus 33 ~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 112 (394)
T PRK11652 33 DMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGV 112 (394)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhH
Confidence 3444555444444444566677888899999999999999999999988877766654 678888899999999999988
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-H
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-G 206 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~ 206 (326)
..+....+..+.. ++++++++.+++..+..++..+|+.+++.+.+. .+||.. |.+..+..++ .
T Consensus 113 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-----~g~~~~-f~~~~~~~~~~~ 176 (394)
T PRK11652 113 GGVMARTLPRDLY----------EGTQLRHANSLLNMGILVSPLLAPLIGGLLTTL-----FGWRAC-YLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChHHH-HHHHHHHHHHHH
Confidence 7766666666654 678899999999888899999999888777543 478874 4444443333 2
Q ss_pred HHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcc
Q 020422 207 TILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVS 284 (326)
Q Consensus 207 ~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~ 284 (326)
.+..+++||+++++++ +.+.+ +...+.+++|+++......+.......... .+.+.+..+ +.+..
T Consensus 177 ~~~~~~~~~~~~~~~~---------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~ 243 (394)
T PRK11652 177 FSMARWMPETRPADAR---------RTRVL---ASYRTLLSNRRFNCYLLMLIGTLAGIAVFE-ACSGVLMGAVLGLSSM 243 (394)
T ss_pred HHHHHhCCccCccccc---------hhHHH---HHHHHHHcChHHHHHHHHHHHHHHHHHHHH-HhChHHHHHHcCCCHH
Confidence 2334556664332111 01111 223355677776643322221111111111 112222222 34455
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
+.++......++..+++.+.+++.||
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~l~~~ 269 (394)
T PRK11652 244 TVSILFILPIPAAFFGAWFAGRPNKR 269 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67877778888888899999999998
No 51
>PRK12382 putative transporter; Provisional
Probab=99.83 E-value=3.9e-18 Score=160.20 Aligned_cols=154 Identities=15% Similarity=0.095 Sum_probs=110.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHh-----hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQN-----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~-----l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~ 99 (326)
+..+.++.+.++.++.+........ ++++++.+...-....+.......+++++.|+++||+|||+++..+.+..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (392)
T PRK12382 12 SANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLAC 91 (392)
T ss_pred cccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHH
Confidence 3444444444444444443332222 34455544333333466777788889999999999999999999988766
Q ss_pred HHHHHHh---------hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhH
Q 020422 100 WLFVAAN---------LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (326)
Q Consensus 100 ~~~~~~~---------~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~ 170 (326)
.+..+.+ ..++++.+++.|+++|++.+..+++..+++.+.. |+++|++++++...+...|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~a~~~~~~~~~~g~ 161 (392)
T PRK12382 92 GLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV----------GPKHSGKVMSWNGMAMYGAL 161 (392)
T ss_pred HHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC----------CccccchhhhHHHHHHHHHH
Confidence 5433221 1357788889999999999998888878887775 88999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCchh
Q 020422 171 FVGNLITLAVLKDDKGGSTSGTT 193 (326)
Q Consensus 171 ~~G~li~~~l~~~~~~~~~~wr~ 193 (326)
.+|++++..+... .+||.
T Consensus 162 ~~g~~~~~~l~~~-----~g~~~ 179 (392)
T PRK12382 162 AAGAPLGLLLHSH-----FGFAA 179 (392)
T ss_pred HHHHHHHHHHHhc-----cChHH
Confidence 9999998777543 46875
No 52
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.83 E-value=2.7e-19 Score=145.29 Aligned_cols=141 Identities=37% Similarity=0.704 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhc----------CCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHH
Q 020422 33 LSCAFLLIFLAYGAAQNLETTVN----------TEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (326)
Q Consensus 33 l~l~~~~~~~~~~~~~~l~~~l~----------~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~ 102 (326)
++++++++|++|++.+.+++++. .+++.|..++++.|..++++++++|.+.+++|+|+.+++|.++|.++
T Consensus 1 Lg~~f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y 80 (156)
T PF05978_consen 1 LGIGFMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIY 80 (156)
T ss_pred CchHHHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46889999999999987777662 24678999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 103 VAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 103 ~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
.++++.|+++.++.+.++.|+|.+++|++++.|+++++ ++++|+|..|++|...+.+.++|+++..++.+
T Consensus 81 ~~~~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s----------~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 81 IASFFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYS----------TEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcC----------CHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999987 67899999999999999999999999888765
Q ss_pred C
Q 020422 183 D 183 (326)
Q Consensus 183 ~ 183 (326)
.
T Consensus 151 ~ 151 (156)
T PF05978_consen 151 G 151 (156)
T ss_pred C
Confidence 4
No 53
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.82 E-value=7.5e-18 Score=159.55 Aligned_cols=259 Identities=12% Similarity=0.071 Sum_probs=159.6
Q ss_pred HHHHHHHHHHHHHHHHhHHhhhhhhcCCCCch----hHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH
Q 020422 30 VHILSCAFLLIFLAYGAAQNLETTVNTEGNLG----TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA 105 (326)
Q Consensus 30 ~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g----~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~ 105 (326)
.+++.+.++..-........+.+.++++.+.+ ....+..+.++.+++++.|++.||+|||+++..+.+++++....
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 34444444444333333333334443332322 23356667788889999999999999999999999888776654
Q ss_pred h----hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 106 N----LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 106 ~----~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
. ..++++.++..|++.|+|.|..+++...++.+.. |+++|++..++.+..+++|..+|++++..+.
T Consensus 85 ~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 85 FWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMG----------PESTATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHC----------CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 2357888889999999999999999888998886 7788999999999999999999999987665
Q ss_pred cCCCC---------------------CCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHH
Q 020422 182 KDDKG---------------------GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSK 240 (326)
Q Consensus 182 ~~~~~---------------------~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (326)
..... ...+||.. |.+.+++.++..++..+.+.|+.+++++ ++.+.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~-fl~~a~~~~~~~~~~~~~~~p~~~~~~~-------~~~~~~~~-- 224 (410)
T TIGR00885 155 LSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTP-YMIIGAVVLAVALLIMLTKMPALNHSDA-------KQISFSAS-- 224 (410)
T ss_pred hcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCCCCcccc-------ccccchhh--
Confidence 32100 01358763 5444444443333333333332111111 01111111
Q ss_pred HHHHhhhcchhHHHH-HHHHHhhHHHHHhhhcccccccccccCc--chHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 241 SITTLLADVRMLLII-PLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 241 ~~~~~~~~~~~~~l~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
..+.+|+|+++... ..+++.+.+... ++.++++......+. +..+.....+..+..+|+++++++.||
T Consensus 225 -~~~~~~~~~~~~~~l~~f~yvg~e~~~-~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r 295 (410)
T TIGR00885 225 -LSRLARIRHYREGVIAQFFYVGVQIMC-WTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISY 295 (410)
T ss_pred -HHHHHhChhHHHHHHHHHHHHHHHHHH-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22456777777643 445566666444 223333222111222 223334445556778999999999999
No 54
>PRK10504 putative transporter; Provisional
Probab=99.82 E-value=6e-18 Score=162.81 Aligned_cols=278 Identities=8% Similarity=-0.065 Sum_probs=173.6
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCch----hHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLG----TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g----~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~ 101 (326)
..++++.+.+++++............+.+.++.+.+ ....+...++.++++++.|+++||+|||++++.+.+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 87 (471)
T PRK10504 8 VRWQLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTL 87 (471)
T ss_pred hHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 345677777776665555444443333333332222 2234555566678889999999999999999998887776
Q ss_pred HHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 102 ~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
..+.. +.++++.+++.|+++|++.+..++...+++.+.. |+++|+++.|+.....++|..+|+.+++.+
T Consensus 88 ~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 88 GSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIV----------PREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 66553 6788888899999999999999988888888876 788999999999999999999999998877
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCcccc-ccccccc--------------cchhhchH---------
Q 020422 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEEDKG-EKETADA--------------SVNFYSYL--------- 235 (326)
Q Consensus 181 ~~~~~~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~~~~~-~~~~~~~--------------~~~~~~~~--------- 235 (326)
.+. .+||+. |.+......++.++. ...|+++.++ +.|.... ...+...+
T Consensus 158 ~~~-----~gw~~~-f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (471)
T PRK10504 158 VEY-----ASWHWI-FLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLV 231 (471)
T ss_pred Hhh-----ccHHHH-HHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHH
Confidence 653 478874 444444444443333 3344432211 1110000 00000000
Q ss_pred ------------HHHH----HHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHH
Q 020422 236 ------------VSLS----KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFD 297 (326)
Q Consensus 236 ------------~~~~----~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~ 297 (326)
++.. ....+.+|||+++......++....... ...+.|.+.+ .+.+....++.+....++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~ 310 (471)
T PRK10504 232 AVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGM-LPFMTPVFLQIGLGFSPFHAGLMMIPMVLGS 310 (471)
T ss_pred HHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 0000 0012456778777655444433332221 1123333332 2444557788888888888
Q ss_pred HHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 298 AISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 298 ~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
.++..+.|+++|| ||+++..+.+
T Consensus 311 ~~~~~~~~~l~~r~g~~~~~~~~~~ 335 (471)
T PRK10504 311 MGMKRIVVQVVNRFGYRRVLVATTL 335 (471)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHH
Confidence 8888999999999 6666655554
No 55
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.82 E-value=1.6e-18 Score=173.44 Aligned_cols=144 Identities=12% Similarity=0.028 Sum_probs=115.6
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
..++.+++..++++++|+++||+|||++++++.++++++.+.. ++++++.++++|++.|++.|...+...+++++++
T Consensus 207 l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~-- 284 (742)
T TIGR01299 207 LGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFL-- 284 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
Confidence 3566778889999999999999999999999998888777654 7889999999999999999999999999999997
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--------CCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--------GGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--------~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
|+++||+.++++.....+|.++++.++..+....+ ....+||+. +++.++..++.+++.+++|
T Consensus 285 --------p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l-~~i~~lp~ll~ll~~~~lP 355 (742)
T TIGR01299 285 --------AQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVF-VIVCAFPCVFAIGALTFMP 355 (742)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHH-HHHHHHHHHHHHHHHHHcC
Confidence 88999999999999999999999888766553211 012468873 4444444555556667889
Q ss_pred CCcc
Q 020422 215 KEED 218 (326)
Q Consensus 215 ~~~~ 218 (326)
|+++
T Consensus 356 ESPr 359 (742)
T TIGR01299 356 ESPR 359 (742)
T ss_pred CCHH
Confidence 9764
No 56
>PRK10054 putative transporter; Provisional
Probab=99.82 E-value=3.1e-18 Score=161.43 Aligned_cols=267 Identities=14% Similarity=0.072 Sum_probs=166.0
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHh-hhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQN-LETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~-l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~ 99 (326)
+.+|+.+.+.++.++...++..... +...+.++.+.+. ...+.......+++++.|+++||+|||++++++.++.
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHH
Confidence 4566677777776666555544332 2223322323222 2244445566778899999999999999999988877
Q ss_pred HHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHH
Q 020422 100 WLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (326)
Q Consensus 100 ~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~ 178 (326)
++..+.. +.++++.+++.|.+.|.+.+...+...++..|.. |+++|+++.|+.+...++|..+|+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~~~~g~~~~~~~lg~~igp~l~~ 153 (395)
T PRK10054 84 ASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNL----------SSTSKTKIFSLNYTMLNIGWTVGPPLGT 153 (395)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655544 6788888888898988888877777777777765 7889999999999999999999999988
Q ss_pred HHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHH
Q 020422 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL 257 (326)
Q Consensus 179 ~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 257 (326)
.+.. .+|+.. |....++.+++.++ .+++||++++++++ ++.. .+..+.+|||+++.....
T Consensus 154 ~l~~------~g~~~~-f~~~~~~~~i~~i~~~~~~~~~~~~~~~~-------~~~~-----~~~~~~~~~~~~~~~~~~ 214 (395)
T PRK10054 154 LLVM------QSINLP-FWLAAICSAFPLVFIQIWVQRSEKAIATE-------TGSV-----WSPSVLLQDKALLWFTCS 214 (395)
T ss_pred HHHH------hccCcH-HHHHHHHHHHHHHHHHHHHhccccccccc-------hhhh-----hhhhhhccCceehHHHHH
Confidence 7753 257763 54545555554333 34455543321111 0101 112356788888765544
Q ss_pred HHHhhHHHHHh---hhcccccccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 258 FAYSGLQQAFV---WAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 258 ~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
.+...+..... ...|.+.....+.+.+..+......++.........|++.|| ||+.+..+.+
T Consensus 215 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~ 282 (395)
T PRK10054 215 GFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTL 282 (395)
T ss_pred HHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHHHHHHH
Confidence 33322221111 112222221122333456667777776666677888999998 5665555543
No 57
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.82 E-value=2.6e-18 Score=166.83 Aligned_cols=143 Identities=15% Similarity=0.031 Sum_probs=110.1
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhh------hHHHHHHHHHhhhhhHHHHhhhhHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYLT 137 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~l~ 137 (326)
.+...++..+++++.|+++||+|||+++.++.+++.+..+.. ++++ +..+++.|+++|++.|..++....|++
T Consensus 62 ~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~ 141 (502)
T TIGR00887 62 NGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITS 141 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 455566778889999999999999999999988887766543 4443 678889999999999999999999999
Q ss_pred HHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC------------------CCCCCchhHHHHHH
Q 020422 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK------------------GGSTSGTTLLFIVF 199 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~------------------~~~~~wr~~~f~~~ 199 (326)
|++ |+++||++.++.+....+|..+|+.++..+..... ...++||.. +.+.
T Consensus 142 e~~----------p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~-~~~~ 210 (502)
T TIGR00887 142 EFA----------TKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRIL-IGFG 210 (502)
T ss_pred Hhc----------ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHH-HHHH
Confidence 997 88999999999999999999999988766543110 012479874 4333
Q ss_pred HHHHHHHHHHHHhccCCcc
Q 020422 200 LGVITLGTILMCFLRKEED 218 (326)
Q Consensus 200 ~~~~~l~~il~~~l~~~~~ 218 (326)
.+..++..+..+++||+++
T Consensus 211 ~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 211 AVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHhCCCCHH
Confidence 4444444455577899765
No 58
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.82 E-value=4.1e-18 Score=162.68 Aligned_cols=230 Identities=10% Similarity=-0.014 Sum_probs=150.5
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh----hhhHHHHHHHHHhhhhhHHHHhhhhHHHH
Q 020422 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF----PSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (326)
Q Consensus 63 ~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~----~~~~~l~~~r~l~G~g~g~~~~~~~~~l~ 137 (326)
...+....++.+++++.|+++||+|||+++..+.+++++..... .. +++..+++.|.+.|++.|..++....++.
T Consensus 65 ~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~ 144 (438)
T TIGR00712 65 FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMV 144 (438)
T ss_pred HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHH
Confidence 34566667788889999999999999999999888777665543 22 45677778899999999998888778888
Q ss_pred HHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCC
Q 020422 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKE 216 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~ 216 (326)
++. |+++||+++|+++.+.++|..+++.+....... ..+||.. |++.+++.++ .++..+++||+
T Consensus 145 ~~~----------~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~----~~~w~~~-f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 145 HWW----------SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW----FNDWHAA-LYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred Hhc----------CcccchhHHHHHHHHHHhHhHHHHHHHHHHHHH----hhhhHHH-HHHHHHHHHHHHHHHHHhccCC
Confidence 876 889999999999999999999988776543322 1479874 5554555444 33445667775
Q ss_pred ccccc--c-c--cccc----cch--hhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCc
Q 020422 217 EDKGE--K-E--TADA----SVN--FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGV 283 (326)
Q Consensus 217 ~~~~~--~-~--~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~ 283 (326)
+++.+ + + ..+. ..+ ++.+.++.+. .+.+|+++++......+.......... .+.|.+.. .+.+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~ 286 (438)
T TIGR00712 210 PQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFM--QYVLPNKLLWYIAIANVFVYLLRYGVL-DWSPTYLKEVKHFAL 286 (438)
T ss_pred HHhcCCCCchhcccccccccccccccccchHHHHH--HHHccCchHHHHHHHHHHHHHHHHHHH-HhHHHHHHHccCCCh
Confidence 43210 0 0 0000 000 0011111111 135688888776544333222111112 23344333 34566
Q ss_pred chHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 284 SGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 284 ~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
...++....+++++.++++++|+++||
T Consensus 287 ~~~~~~~~~~~~~~~ig~~~~g~l~dr 313 (438)
T TIGR00712 287 DKSSWAYFLYEYAGIPGTLLCGWMSDK 313 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 678888888999999999999999999
No 59
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.82 E-value=5e-18 Score=162.90 Aligned_cols=243 Identities=10% Similarity=-0.022 Sum_probs=150.5
Q ss_pred hhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHH-HHHHhhhhhHHH
Q 020422 51 ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVP-ASLYLGFAASII 128 (326)
Q Consensus 51 ~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~-~r~l~G~g~g~~ 128 (326)
+++++.+.+......+..+....++.++.|+++||+|||++++.+.++.++..+.. ++++++.++. .|++.|++.+..
T Consensus 46 ~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~ 125 (455)
T TIGR00892 46 QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFN 125 (455)
T ss_pred HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhh
Confidence 33444333333333455556677888999999999999999999988777766554 6777777654 579999999987
Q ss_pred HhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 020422 129 WVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (326)
Q Consensus 129 ~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i 208 (326)
++...+++.++. +++|+++.|+...+..+|..+++.+++.+... .+||+. |++.+++.++..+
T Consensus 126 ~~~~~~~~~~~~-----------~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~-----~gwr~~-f~~~~~~~~~~~v 188 (455)
T TIGR00892 126 FQPSLTMLGKYF-----------YRRRPLANGLAMAGSPVFLSTLAPLNQYLFES-----FGWRGS-FLILGGLLLHCCV 188 (455)
T ss_pred hhHHHHHHHHHH-----------HhhHHHHHHHHHhcccHHHHHHHHHHHHHHHH-----hChHHH-HHHHHHHHHHHHH
Confidence 666666777764 46899999999999999999999888776543 479874 5555555554444
Q ss_pred HHHhccCCccc----ccc--cccc-c-cchh--hchHHHHHHHH--HHhhhcchhHHHHHHHHHhhHHHHHhhhcccccc
Q 020422 209 LMCFLRKEEDK----GEK--ETAD-A-SVNF--YSYLVSLSKSI--TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI 276 (326)
Q Consensus 209 l~~~l~~~~~~----~~~--~~~~-~-~~~~--~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~ 276 (326)
..+++++++++ +++ +..+ . ..++ ..+..++.++. .+.+++|+++......+..++........++++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~ 268 (455)
T TIGR00892 189 CGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYA 268 (455)
T ss_pred HHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHH
Confidence 33333322111 000 0000 0 0000 00111111111 2567888887655443333222111111222222
Q ss_pred cccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 277 VTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 277 ~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
...+.+....+......+++..+++++.|+++||
T Consensus 269 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~ 302 (455)
T TIGR00892 269 KDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGL 302 (455)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2234556678888899999999999999999996
No 60
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.81 E-value=2.5e-18 Score=163.00 Aligned_cols=230 Identities=12% Similarity=-0.020 Sum_probs=148.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh------hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN------LFPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~------~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
.+...+...+++++.|+++||+|||+++..+.++.++..... ..++++.+++.|++.|++.+...++..+++.+
T Consensus 58 ~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~ 137 (417)
T PRK10489 58 VTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPA 137 (417)
T ss_pred HHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 455556677888999999999999999988776655433221 14577888889999999999887877777777
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
+. |+++|+++.++.....++|..+|+.+++.+... .+|++. |.+..+..++..++.+.+|++++
T Consensus 138 ~~----------~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~-----~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 201 (417)
T PRK10489 138 LV----------GRENLMQAGAITMLTVRLGSVISPALGGLLIAA-----GGVAWN-YGLAAAGTFITLLPLLRLPALPP 201 (417)
T ss_pred cc----------CHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH-----HhhHHH-HHHHHHHHHHHHHHHHhCCCCCC
Confidence 75 778999999999999999999999998877543 357663 44444444444445556666433
Q ss_pred ccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHH
Q 020422 219 KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAF 296 (326)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~ 296 (326)
+++++. +...+.+ +.....+++|.++......+....... .. .+.|.+.. .+.+.+..++.....+++
T Consensus 202 ~~~~~~-----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~p~~~~~~~g~~~~~~g~~~~~~~~g 271 (417)
T PRK10489 202 PPQPRE-----HPLRSLL---AGFRFLLASPVVGGIALLGGLLTMASA-VR-VLYPALADEVWQMGAAQIGLLYAAVPLG 271 (417)
T ss_pred CCcccc-----cchHHHH---HHHHHHHcChHHHHHHHHHHHHHHHHh-HH-HhhHHHHHhccCCChhHhHHHHHHHHHH
Confidence 211110 0111111 122345567776554332222111111 11 22333333 245566788888999999
Q ss_pred HHHHHHHhhhhhhh-h-hhHHhHHHH
Q 020422 297 DAISLLGFATFFSV-H-SLLVGLPLV 320 (326)
Q Consensus 297 ~~~g~~~~G~l~Dr-R-~~~~~~g~~ 320 (326)
..++.++.+++.|| | ++.+..+.+
T Consensus 272 ~~ig~~~~~~l~~~~~~~~~l~~~~~ 297 (417)
T PRK10489 272 AALGALTSGWLAHSARPGLLMLLSTL 297 (417)
T ss_pred HHHHHHHHHHhhhccCcchHHHHHHH
Confidence 99999999999998 3 444444443
No 61
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.81 E-value=9.1e-18 Score=162.45 Aligned_cols=154 Identities=15% Similarity=0.095 Sum_probs=116.5
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCc----hhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNL----GTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL 101 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~----g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~ 101 (326)
.++.+..+.+++++....+.....+.+.+..+.+. .....+..+++..+++++.|+++||+|||++++.+.++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 97 (496)
T PRK03893 18 QWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSV 97 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 34455566666555554554444444444333322 22335566677788899999999999999999999888777
Q ss_pred HHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 102 FVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 102 ~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
..+.. +.++++.+++.|++.|++.+..++....++.+.. |+++|+++.+++..+..+|..+|+.+...+
T Consensus 98 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 98 GTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESW----------PKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66654 6789999999999999999999998888888886 888999999999999999999999888776
Q ss_pred hcCCCCCCCCchhH
Q 020422 181 LKDDKGGSTSGTTL 194 (326)
Q Consensus 181 ~~~~~~~~~~wr~~ 194 (326)
... .+||+.
T Consensus 168 ~~~-----~~w~~~ 176 (496)
T PRK03893 168 VPV-----WGWRAL 176 (496)
T ss_pred hcc-----CCHHHH
Confidence 543 479874
No 62
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.81 E-value=6.9e-18 Score=158.83 Aligned_cols=154 Identities=14% Similarity=0.089 Sum_probs=110.8
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHh-----hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQN-----LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~-----l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~ 99 (326)
+..+++..+.+..+..+.+...... ++++++.+...-....+..+..+.+++++.|+++||+|||+++..+.+++
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 4556666666665555444333322 22333323222223356666778899999999999999999999998877
Q ss_pred HHHHHHh----hh-----hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhH
Q 020422 100 WLFVAAN----LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ 170 (326)
Q Consensus 100 ~~~~~~~----~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~ 170 (326)
++..+.. .. .++..+++.|+++|++.+..+++..+++.++. |+++|+++.++.......|.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~----------~~~~r~~~~~~~~~~~~~g~ 161 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV----------GALHTGRVISWNGIATYGAL 161 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc----------ChhhhccchhhhhhhhhHHH
Confidence 6544322 12 24667888999999999999988888888776 88999999999988889999
Q ss_pred HHHHHHHHHHhcCCCCCCCCchh
Q 020422 171 FVGNLITLAVLKDDKGGSTSGTT 193 (326)
Q Consensus 171 ~~G~li~~~l~~~~~~~~~~wr~ 193 (326)
.+|+.++..+.+. .+|+.
T Consensus 162 ~~g~~l~~~l~~~-----~g~~~ 179 (399)
T PRK05122 162 AIGAPLGVLLYHW-----GGLAG 179 (399)
T ss_pred HHHHHHHHHHHHc-----ccHHH
Confidence 9999998777653 46876
No 63
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.81 E-value=1.4e-18 Score=161.89 Aligned_cols=225 Identities=14% Similarity=0.031 Sum_probs=142.8
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhH--------HHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY--------TMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~--------~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
...+++++.|+++||+|||+++..+.+++++..... +.+++. .+++.|+++|++.+..+++..++++|+.
T Consensus 47 ~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~- 125 (394)
T TIGR00883 47 ARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA- 125 (394)
T ss_pred HhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC-
Confidence 334678999999999999999999998887766654 556543 4778999999999999998888998886
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|+++|++..++...+..+|..+|++++..+..... ....+||.. |.+..++.+++.++...++|+++
T Consensus 126 ---------~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~ 195 (394)
T TIGR00883 126 ---------PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIP-FLVSAVLVLIGLYLRRNLEETPV 195 (394)
T ss_pred ---------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHH-HHHHHHHHHHHHHHHHhcCCChh
Confidence 88999999999999999999999887765543111 123578863 44444444444333344565443
Q ss_pred ccccccccccchhhchHHHHHHHHHHhhhcch--hHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHH
Q 020422 219 KGEKETADASVNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYG 294 (326)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~g 294 (326)
.++++.++ ++...+. .+.+++++ ++......+.......... .+.+.+.. .+.+.++.+......+
T Consensus 196 ~~~~~~~~--~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~ 265 (394)
T TIGR00883 196 FEKAQEKH--KKKRGPI-------RETLTKHRKPFLLGLGLVIATTTTFYLIT-TYLPTYLTQTLGLSANSALLVLMLSL 265 (394)
T ss_pred HHHHHhcc--ccccCCH-------HHHHHhchHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCChhHHHHHHHHHH
Confidence 21111000 0011111 23333433 3333332222222211111 23333332 2345567788888888
Q ss_pred HHHHHHHHHhhhhhhh--hhhHHh
Q 020422 295 AFDAISLLGFATFFSV--HSLLVG 316 (326)
Q Consensus 295 i~~~~g~~~~G~l~Dr--R~~~~~ 316 (326)
++..++..+.|+++|| ||+.+.
T Consensus 266 ~~~~~~~~~~g~l~dr~g~~~~~~ 289 (394)
T TIGR00883 266 ILFFITIPLSGALSDRIGRRPVLI 289 (394)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHH
Confidence 9999999999999999 555444
No 64
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.81 E-value=2e-18 Score=171.39 Aligned_cols=250 Identities=16% Similarity=0.081 Sum_probs=159.1
Q ss_pred hhhhhhcCC-CCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhh-----------------
Q 020422 49 NLETTVNTE-GNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP----------------- 109 (326)
Q Consensus 49 ~l~~~l~~~-~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~----------------- 109 (326)
.+++.++.+ .+.|.+ .+...++++++.++.+++.||+|||+.+.+|.+++++..+.+ +.+
T Consensus 58 ~iek~F~lss~~~G~i-~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~ 136 (633)
T TIGR00805 58 TIERRFKLSTSSSGLI-NGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGN 136 (633)
T ss_pred hhhhhhCCCCCcceee-eehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccccccccc
Confidence 344444433 233333 456667788889999999999999999999999888877654 321
Q ss_pred ----------------------------------hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccch
Q 020422 110 ----------------------------------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI 155 (326)
Q Consensus 110 ----------------------------------~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~r 155 (326)
.+..++++|+++|+|.++.++...+|+.|+. |+++|
T Consensus 137 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~----------~~~~~ 206 (633)
T TIGR00805 137 LSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFA----------KSKNS 206 (633)
T ss_pred ccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccC----------Ccccc
Confidence 2456778999999999999999999999997 88999
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHhcCCC-----------CCCCCchh-----HHHHHHHHHHHHHHHHHHhccCCccc
Q 020422 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDK-----------GGSTSGTT-----LLFIVFLGVITLGTILMCFLRKEEDK 219 (326)
Q Consensus 156 g~~~gi~~~~~~~g~~~G~li~~~l~~~~~-----------~~~~~wr~-----~~f~~~~~~~~l~~il~~~l~~~~~~ 219 (326)
+++.|+++.+..+|..+|+++++.+..... ....+||| ..|.+.+++.++..+.++++|++.++
T Consensus 207 ~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~ 286 (633)
T TIGR00805 207 PLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPK 286 (633)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC
Confidence 999999999999999999999887764321 00112222 23444444554444445566654321
Q ss_pred c----ccc-ccccc----chh--h---chHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCc
Q 020422 220 G----EKE-TADAS----VNF--Y---SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGV 283 (326)
Q Consensus 220 ~----~~~-~~~~~----~~~--~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~ 283 (326)
+ +.+ .++.. ..+ . ...++..+..++.+++|.++......+........+. .+.|.+.. .+++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~-~~lP~yl~~~~g~s~ 365 (633)
T TIGR00805 287 EGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYI-TFLPKYLENQYGISS 365 (633)
T ss_pred cccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHcCCcH
Confidence 1 000 00000 000 0 0112223445678899988876554333322222122 23344333 34556
Q ss_pred chHHHHHHHHHH-HHHHHHHHhhhhhhh
Q 020422 284 SGVGGAMAVYGA-FDAISLLGFATFFSV 310 (326)
Q Consensus 284 ~~~g~~~~~~gi-~~~~g~~~~G~l~Dr 310 (326)
++.++++....+ +.++|.+++|+++||
T Consensus 366 ~~ag~l~~~~~i~~~~vG~~l~G~l~~r 393 (633)
T TIGR00805 366 AEANFLIGVVNLPAAGLGYLIGGFIMKK 393 (633)
T ss_pred HHHHHHhhhhhhhHHHHHHhhhhheeee
Confidence 677877776665 567899999999998
No 65
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.81 E-value=5.3e-18 Score=157.20 Aligned_cols=241 Identities=10% Similarity=0.072 Sum_probs=151.9
Q ss_pred hhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHH
Q 020422 50 LETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIW 129 (326)
Q Consensus 50 l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~ 129 (326)
++++++.+........+..++.+.+++++.|++.||+|||+++.++.++.++..+....++++.++..|++.|++.+...
T Consensus 26 l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~g~~~~~ 105 (355)
T TIGR00896 26 IRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIRSAPGTALLFAGTALIGVGIAIIN 105 (355)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 34444433333233456777788899999999999999999999988776665544456788888899999999999887
Q ss_pred hhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 020422 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (326)
Q Consensus 130 ~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il 209 (326)
+....++.+. .+++|+++.+++..+..+|..+|+.+...+.+.. ..+||.. |....+..++. +
T Consensus 106 ~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~---~~~w~~~-f~~~~~~~~~~--~ 168 (355)
T TIGR00896 106 VLLPSLIKRD-----------FPQRVGLMTGLYSMALMGGAALAAAATVPLAQHS---GGHWQQA-LAWWALPALLA--L 168 (355)
T ss_pred ccchHHHHHh-----------CcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhhHHHH-HHHHHHHHHHH--H
Confidence 7766666665 3468999999999999999999998877665432 1248763 33333322222 2
Q ss_pred HHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccc-cccccCcchHHH
Q 020422 210 MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VTPALGVSGVGG 288 (326)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~ 288 (326)
..++|+.+++++++.+ .+..+ .++.+|+|+++.....+........... .+.|.+ .+.+.+.++.+.
T Consensus 169 ~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lp~~~~~~g~~~~~~g~ 236 (355)
T TIGR00896 169 LAWIPQVRRRVAANQT----TTRLT-------PVRIWRSPLAWQVTVFFGLQSGLYYSLI-GWLPAILISHGASAATAGS 236 (355)
T ss_pred HHHhhhhccccCCCCC----CCCCC-------CchhhcCHhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHH
Confidence 2334443221111100 00001 1245567777654433222222111112 223333 234556667889
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh---hhhHHhHHH
Q 020422 289 AMAVYGAFDAISLLGFATFFSV---HSLLVGLPL 319 (326)
Q Consensus 289 ~~~~~gi~~~~g~~~~G~l~Dr---R~~~~~~g~ 319 (326)
.....+++..+++++.|+++|| ||..+..+.
T Consensus 237 ~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~ 270 (355)
T TIGR00896 237 LLALMQLAQAASALLIPALARRVKDQRGIVAVLA 270 (355)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHH
Confidence 9999999999999999999999 454444443
No 66
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.80 E-value=6e-17 Score=152.91 Aligned_cols=249 Identities=11% Similarity=0.041 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHH----HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh
Q 020422 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILY----TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (326)
Q Consensus 31 ~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~----~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~ 106 (326)
+++...++.....+.....+...+..+.+.+....+... ....+.+++.|+++||+|||+++..+.++.++..+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~ 93 (400)
T PRK11646 14 FLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATM 93 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333344333343333333333 3345557889999999999999999999887776654
Q ss_pred -hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC
Q 020422 107 -LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 185 (326)
Q Consensus 107 -~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~ 185 (326)
..++++.+++.|+++|++.+..+++..+++.+.. |+++|+++.|+.....++|..+|+.+++.+..
T Consensus 94 ~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~----------~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~--- 160 (400)
T PRK11646 94 AIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLI----------RPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--- 160 (400)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 6778888889999999999998888888888876 78899999999999999999999999888762
Q ss_pred CCCCCchhHHHHHHHHHHHHHH-HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHH
Q 020422 186 GGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ 264 (326)
Q Consensus 186 ~~~~~wr~~~f~~~~~~~~l~~-il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 264 (326)
.+||+. |++.....++.. +..+++||+++++ + +.+.++ +..+.++|++++......+.....
T Consensus 161 ---~g~~~~-f~~~~~~~~~~~i~~~~~~~~~~~~~--~--------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 223 (400)
T PRK11646 161 ---YDFRLV-CATGAVLFVLAAAFNAWLLPAYKLST--V--------RTPVRE---GMTRVLRDKRFVTYVLTLTGYYML 223 (400)
T ss_pred ---hhHHHH-HHHHHHHHHHHHHHHHHhCCcccccc--c--------chhhHH---HHHHHHcCchHHHHHHHHHHHHHH
Confidence 368763 444344333333 2234455422111 0 001111 233566788776543332221111
Q ss_pred HHHhhhccccccccc-ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 265 QAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 265 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.... ..+.|.+..+ ..+.+..++.....++....+....+++.||
T Consensus 224 ~~~~-~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~ 269 (400)
T PRK11646 224 AVQV-MLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEK 269 (400)
T ss_pred HHHH-HHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 1233443332 2345567877777777776666666777775
No 67
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.79 E-value=1.9e-16 Score=148.60 Aligned_cols=241 Identities=14% Similarity=0.085 Sum_probs=162.6
Q ss_pred hhhhhcCCCCc-hhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHH
Q 020422 50 LETTVNTEGNL-GTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 50 l~~~l~~~~~~-g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~ 127 (326)
+.++++.+.+. -....+.++.+|+++++++|.++||+|.|+++.++.+.+++.++.. ++++...+.+.|++.|+++|+
T Consensus 52 L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~ 131 (511)
T TIGR00806 52 LLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAA 131 (511)
T ss_pred HHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444333 3334677778899999999999999999999999999999988876 778999999999999999999
Q ss_pred HHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHH--HHHHHHHHHH
Q 020422 128 IWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL--FIVFLGVITL 205 (326)
Q Consensus 128 ~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~--f~~~~~~~~l 205 (326)
.+ +...|+..+. |+++|+++.|++.++..+|.+++++++..+. . .+||... ..+..+...+
T Consensus 132 ~~-A~~syI~~Wf----------P~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s-----~gWr~y~~Ln~Isl~s~~~ 194 (511)
T TIGR00806 132 RI-AYSSYIFSLV----------PPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-T-----LGWISYSTLNIISLVFMTF 194 (511)
T ss_pred HH-HHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-----cCchhHHHHHHHHHHHHHH
Confidence 99 8899999997 8899999999999999999999999987743 2 4788622 1233344456
Q ss_pred HHHHHHhccCCccc----ccc--------c--c--cccc--chh-hc-----hHHHHHHHHHHhhhcchhHHHHHH--HH
Q 020422 206 GTILMCFLRKEEDK----GEK--------E--T--ADAS--VNF-YS-----YLVSLSKSITTLLADVRMLLIIPL--FA 259 (326)
Q Consensus 206 ~~il~~~l~~~~~~----~~~--------~--~--~~~~--~~~-~~-----~~~~~~~~~~~~~~~~~~~~l~~~--~~ 259 (326)
+.++.+++|.+++. +++ + . .+.. ..+ .+ ..+...+++.+..+|++++..... +.
T Consensus 195 a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a 274 (511)
T TIGR00806 195 SVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFN 274 (511)
T ss_pred HHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHH
Confidence 77778899965541 110 0 0 0000 000 00 112223455566788887764432 33
Q ss_pred HhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 260 YSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 260 ~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.+|..+.. .|.+.+-. +.-..+..|.+-++..+.++++++..|++-.+
T Consensus 275 ~~g~~qv~---~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~ 324 (511)
T TIGR00806 275 SAGYYLIT---YYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIR 324 (511)
T ss_pred hhHHHHHH---HHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 34444332 22222211 11111256777777777788889999998665
No 68
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.78 E-value=3.7e-17 Score=173.25 Aligned_cols=243 Identities=14% Similarity=0.060 Sum_probs=154.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH----hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~----~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
.++..+.+.++++++|+++||+|||++++++.++..++.+. ...++++.+++.|+++|++.+..+++..+++.++.
T Consensus 53 ~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 132 (1146)
T PRK08633 53 NALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELV 132 (1146)
T ss_pred HHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhc
Confidence 45566677888999999999999999999887665444432 23567889999999999999999999999999987
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCC---C-CCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD---K-GGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~---~-~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
|+++|++++|++..+.++|.++|+++++.+.... . ....+|++..+++.....++++++.+.+|+.
T Consensus 133 ----------~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (1146)
T PRK08633 133 ----------GKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKV 202 (1146)
T ss_pred ----------CcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCC
Confidence 8899999999999999999999999988876431 0 0011233322222223333444445566665
Q ss_pred ccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-cccCcc-hHHHHHHHHH
Q 020422 217 EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVS-GVGGAMAVYG 294 (326)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~-~~g~~~~~~g 294 (326)
++......++ .+....++....+...++++.++......+............++.++.. .+.+.. ..++.+...+
T Consensus 203 ~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ 279 (1146)
T PRK08633 203 PAAAPEVFDK---KKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASA 279 (1146)
T ss_pred CCCCcccccc---cccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHH
Confidence 4322111000 0111111212233345677776665443332222222222223222221 244555 6788899999
Q ss_pred HHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 295 AFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 295 i~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
++..+++++.|+++|| |+.++..+.+
T Consensus 280 ig~~~g~~~~g~l~~r~~~~~~~~~~~~ 307 (1146)
T PRK08633 280 IGIGIGSLLAGRLSGRHIELGLVPLGAL 307 (1146)
T ss_pred HHHHHHHHHHHHHhCCceEccchhHHHH
Confidence 9999999999999999 4444444443
No 69
>TIGR00898 2A0119 cation transport protein.
Probab=99.78 E-value=1.1e-17 Score=162.24 Aligned_cols=238 Identities=14% Similarity=0.072 Sum_probs=154.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 63 ~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
...++.++++.+++++.|+++||+|||+++.++.++.++..+.. ++++++.+++.|++.|++.+..++...+++.|+.
T Consensus 131 ~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~- 209 (505)
T TIGR00898 131 LTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFL- 209 (505)
T ss_pred HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheec-
Confidence 34677778889999999999999999999999998887777654 7899999999999999999999999899999987
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc--
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK-- 219 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~-- 219 (326)
|+++|++..+++..+...|.+++++++..+. +||+. |++..+..++..+..+++||+++.
T Consensus 210 ---------~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--------~wr~~-~~~~~i~~~~~~~~~~~~~esp~~l~ 271 (505)
T TIGR00898 210 ---------PKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP--------DWRWL-QLAVSLPTFLFFLLSWFVPESPRWLI 271 (505)
T ss_pred ---------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh--------HHHHH-HHHHHHHHHHHHHHHHhcCCChHHHH
Confidence 8899999999998888899888888875542 38874 545555555555556778886531
Q ss_pred --cccccc-----------cc--cchh-hch-HH---HHH--HHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccc
Q 020422 220 --GEKETA-----------DA--SVNF-YSY-LV---SLS--KSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 277 (326)
Q Consensus 220 --~~~~~~-----------~~--~~~~-~~~-~~---~~~--~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~ 277 (326)
.+.++. +. ..+. ... .+ +.. ....+.+++|+++..........+...+.. +...+.
T Consensus 272 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 349 (505)
T TIGR00898 272 SQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSY--YGLVLD 349 (505)
T ss_pred HCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHH--HHHhcc
Confidence 110000 00 0000 000 00 000 123456677777665443322222211111 111111
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 278 TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 278 ~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
....+.+ ........++....+.++.++++|| ||..+..+.++.
T Consensus 350 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~ 395 (505)
T TIGR00898 350 LGNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLA 395 (505)
T ss_pred ccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 1122222 2334455677888899999999999 776666655443
No 70
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.78 E-value=6.7e-17 Score=171.33 Aligned_cols=226 Identities=13% Similarity=0.039 Sum_probs=151.3
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHH---HhHHHHHHHH-HhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALIL---GTTGYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~---g~~~~~~~~~-~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
..++..+.+.++++++|+++||+|||+++.. ..+.+..... +...++++.++++|+++|++.+..+++..+++.++
T Consensus 57 ~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~ 136 (1140)
T PRK06814 57 AGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDH 136 (1140)
T ss_pred HHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhh
Confidence 3455667788999999999999999998643 2222222222 23457899999999999999999999999999998
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~ 219 (326)
. |+++|++++|+...+.++|.++|+++++.+... .+|+.. |+......+++.++.++++++++.
T Consensus 137 ~----------~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 200 (1140)
T PRK06814 137 L----------NKDELLGANALVEAGTFIAILLGTIIGGLATIS-----GNFVIL-VALLMGIAVLGWLASLFIPKTGNA 200 (1140)
T ss_pred c----------CccccchhhHHHHHHHHHHHHHHHHHHHHHHhc-----cccHHH-HHHHHHHHHHHHHHHhhCCCCCCC
Confidence 7 889999999999999999999999999988754 368763 333333334444455666665432
Q ss_pred cccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-cccCcchHHHHHHHHHHHHH
Q 020422 220 GEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGAFDA 298 (326)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~gi~~~ 298 (326)
...... +.....+....+....+++.++.....+++..+........++.++.. .+.+....|+.+..++++.+
T Consensus 201 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ 275 (1140)
T PRK06814 201 APDLKI-----DRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVA 275 (1140)
T ss_pred CCCCee-----ccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHH
Confidence 111100 001111111223345677887776655444433332223333332221 23455678999999999999
Q ss_pred HHHHHhhhhhhh
Q 020422 299 ISLLGFATFFSV 310 (326)
Q Consensus 299 ~g~~~~G~l~Dr 310 (326)
+|+++.|+++|+
T Consensus 276 ig~~~~g~l~~~ 287 (1140)
T PRK06814 276 VGSFLASKLSEG 287 (1140)
T ss_pred HHHHHHHHHhCC
Confidence 999999999986
No 71
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.78 E-value=8.9e-18 Score=160.17 Aligned_cols=223 Identities=12% Similarity=0.048 Sum_probs=163.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
.+..+.++.++++++|++.||+|.|+++..+.++.++.++.. + ..+++.+++.|+++|+++|..+++.....+.|+
T Consensus 79 ~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~- 157 (466)
T KOG2532|consen 79 FSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWA- 157 (466)
T ss_pred HHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeEC-
Confidence 566677778889999999999999999999999988888764 3 235567788999999999999999999999997
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH-hccCCcccc
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKG 220 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~-~l~~~~~~~ 220 (326)
|++||++..++..++.++|.+++.++++.+.+. +.||+.. |.++++++++-.++++ +..|++.+.
T Consensus 158 ---------P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----~~GW~si-fY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 158 ---------PPNERSTFIAILTAGSQLGTIITMPVSGLLCES----SLGWPSI-FYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred ---------CHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----CCCCchH-HHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 999999999999999999999999888888654 3689874 5567777666555543 344433321
Q ss_pred c----cccccccc-------h--hhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcch
Q 020422 221 E----KETADASV-------N--FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSG 285 (326)
Q Consensus 221 ~----~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~ 285 (326)
+ +|.+..+. + .+.+ .+++++++.+|......+.-.+....+. .|.|.|.. .+++.+.
T Consensus 224 ~~is~~El~~I~~~k~~~~~~~~~~vP-------~~~i~ts~~vwai~~~~f~~~~~~~~l~-~y~PtY~~~VL~f~v~~ 295 (466)
T KOG2532|consen 224 PNISEKELKYIEKGKSEAHVKKKPPVP-------YKAILTSPPVWAIWISAFGGNWGFYLLL-TYLPTYLKEVLGFDVRE 295 (466)
T ss_pred CCCCHHHHHHHHhcccccccCCCCCCC-------HHHHHcCHHHHHHHHHHHHHHHHHHHHH-HHhhHHHHHHhCCChhh
Confidence 1 01000000 0 0112 2367788998876655443333322222 45566654 3567778
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 286 VGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 286 ~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.|+..++..+...+..+++|.++||
T Consensus 296 ~G~~salP~l~~~~~k~~~g~lsD~ 320 (466)
T KOG2532|consen 296 TGFLSALPFLAMAIVKFVAGQLSDR 320 (466)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998
No 72
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.77 E-value=1.3e-16 Score=149.51 Aligned_cols=266 Identities=10% Similarity=-0.009 Sum_probs=162.5
Q ss_pred hHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhH----HHHHHHHHHhhhhhhHHHHHHHhchhhHH----HHHhHHHH
Q 020422 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSKNAL----ILGTTGYW 100 (326)
Q Consensus 29 ~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~----~~~~~~~~~~~~~l~~g~l~d~~Grr~~l----~~g~~~~~ 100 (326)
....+++.++..+.++.......+.+.++.+.+.. ..+.......+++++.++++||+||+... ..+..++.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~ 84 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFA 84 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 44557777777776665554444444333333332 24455566678889999999999985433 23222222
Q ss_pred HHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 101 LFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 101 ~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
+. ....+++++.+++.|.++|.+.+...+...++..+ ++++|+++.|......++|.++|+++++.+
T Consensus 85 ~~-~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~------------~~~~~~~~~g~~~~~~slG~~~g~~l~g~l 151 (382)
T TIGR00902 85 AA-FSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT------------WQKQFGLDYGKVRLIGSAAFIIGSALFGGL 151 (382)
T ss_pred HH-HHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH------------HHHHcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 21 11246788888889999999998877776665443 246789999999999999999999998888
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC-ccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHH
Q 020422 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE-EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA 259 (326)
Q Consensus 181 ~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 259 (326)
.+. .+||.. |.+......+. ++.+.++++ +++++++ + ++..+ .++..+.+|||+++......+
T Consensus 152 ~~~-----~g~~~~-f~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~----~~~~~----~~~~~~~l~~~~~~~~l~~~~ 215 (382)
T TIGR00902 152 IGM-----FDEQNI-LAILTAGLAFM-LIGFLIKPTIPPKDAIP-E----DESQG----DSAFIALLKNPMNLRFLAAVC 215 (382)
T ss_pred HHH-----cChhHH-HHHHHHHHHHH-HHHHHcCCCCCCCcccc-c----ccccc----chhHHHHHcChHHHHHHHHHH
Confidence 654 479874 43333322222 222333432 2211111 0 00111 122346778898887655443
Q ss_pred HhhHHHHHhhhcccccccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhh
Q 020422 260 YSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHL 323 (326)
Q Consensus 260 ~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~ 323 (326)
........+.+.+++.+.+.+.+.+++|.......+++.++..+.+++.|| +|+++..+.+...
T Consensus 216 l~~~~~~~~~~~~~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~ 281 (382)
T TIGR00902 216 LIQGAHAAYYGFSAIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACV 281 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHH
Confidence 332222223333333333345566678888888888899999999999999 5666667766554
No 73
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.77 E-value=6.8e-17 Score=153.10 Aligned_cols=247 Identities=17% Similarity=0.124 Sum_probs=165.5
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH----hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA----NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~----~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
.++.+++..++++++++++||+|||..++++.+...+...+ ...+++.+++.+|++.|+..|.......-|+.|.+
T Consensus 66 vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~s 145 (485)
T KOG0569|consen 66 VSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEIS 145 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcC
Confidence 56677777888999999999999999999888765444433 24678999999999999999999999999999998
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc-
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK- 219 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~- 219 (326)
|++.||....+...+..+|..+|..++..-.-+. ...|+. ++....+.+++..++..++||+++-
T Consensus 146 ----------P~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt---~~~W~~-l~~~~~i~~~~~l~~l~~~PESPk~L 211 (485)
T KOG0569|consen 146 ----------PKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGT---EDLWPY-LLAFPLIPALLQLALLPFLPESPKYL 211 (485)
T ss_pred ----------hhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCC---CcchHH-HHHHHHHHHHHHHHHHhcCCCCcchH
Confidence 8899999988888788888777766653222111 245765 3444455556666677889997751
Q ss_pred ---cc-ccccc----------c-cchhh---chHHH------HHHHHHHhhhcchhHHHHHHHHHhhHHHHH--hhh--c
Q 020422 220 ---GE-KETAD----------A-SVNFY---SYLVS------LSKSITTLLADVRMLLIIPLFAYSGLQQAF--VWA--E 271 (326)
Q Consensus 220 ---~~-~~~~~----------~-~~~~~---~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~--~~~--~ 271 (326)
+. +++++ . +...+ ...++ +..++++.++++..+.-....+...+.+.+ ... .
T Consensus 212 l~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~ 291 (485)
T KOG0569|consen 212 LIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFF 291 (485)
T ss_pred HHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHH
Confidence 11 11100 0 00000 00000 111355777887777643322222222222 111 1
Q ss_pred cccc-ccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhhcC
Q 020422 272 FTKE-IVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHLSL 325 (326)
Q Consensus 272 ~~~~-~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~~~ 325 (326)
|... +.+.++..+..-++....++.+.+.++++..+.|| ||++++.+...+.++
T Consensus 292 Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~ 348 (485)
T KOG0569|consen 292 YSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVA 348 (485)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 2222 23446666778889999999999999999999999 999999998877654
No 74
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.77 E-value=1.8e-16 Score=147.35 Aligned_cols=225 Identities=12% Similarity=-0.019 Sum_probs=135.2
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHH-HhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALIL-GTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~-g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
+.......+.+++.|.++||+|||+.++. +.+..++.... ..+++++.+++.|.++|.+.+...+...++..++.
T Consensus 40 ~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~--- 116 (375)
T TIGR00899 40 TGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHA--- 116 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHh---
Confidence 33334456678889999999999887665 44444444443 36788888888899998888877777666666664
Q ss_pred hhhcCCCcccchhhH--HHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCcccc
Q 020422 144 ASNHKLHEGTVIGSF--NGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKG 220 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~--~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~ 220 (326)
|+++|++. .++...+.++|..+|+.+++.+.+. .+||+. |++.+.+.++..++ .+++||+++++
T Consensus 117 -------~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~-----~~~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (375)
T TIGR00899 117 -------DRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALG-----FGFTVM-FLTAALAFVLCGVLVWLFLPSYPRGA 183 (375)
T ss_pred -------hhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHh-----cccHHH-HHHHHHHHHHHHHHHHHhCCCcccCc
Confidence 44555543 6777778889999999988877643 479873 55555554444333 35577754322
Q ss_pred ccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHH
Q 020422 221 EKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDA 298 (326)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~ 298 (326)
+++. ++.+ . .+.+++++++.+....+............+ +.+.. .+.+.++.+.......+...
T Consensus 184 ~~~~------~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~ 249 (375)
T TIGR00899 184 PGAL------TRLE----V---RGLLASRDTRLLFVACTLMWGCNILYIINM-PLLIIHELGLPDKLAGLMMGTAAGLEI 249 (375)
T ss_pred cccc------Ccch----h---hhhhcCcchHHHHHHHHHHHHHHHHHHhhh-HHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence 1110 0111 1 123456665543332221111111111122 22222 24555667777766666777
Q ss_pred HHHHHhhhhhhh--hhhHHhHHHH
Q 020422 299 ISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 299 ~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
++..+.|+++|| ||+.+..+.+
T Consensus 250 ~~~~~~g~l~~r~g~~~~~~~~~~ 273 (375)
T TIGR00899 250 PFMLLAGYLIKRFGKRRLMLLAAL 273 (375)
T ss_pred HHHHhHHHHHHHhcchhHHHHHHH
Confidence 788999999999 6665555443
No 75
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.77 E-value=8.1e-17 Score=147.36 Aligned_cols=208 Identities=15% Similarity=0.166 Sum_probs=148.4
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
..+.......+++++.|+++||+|||+.+..+.++..+..... ..++++.++++|++.|++.+..++...+++.|+.
T Consensus 39 ~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-- 116 (352)
T cd06174 39 IVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWF-- 116 (352)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhC--
Confidence 3555666778889999999999999999999998887776654 5688899999999999999999999999999986
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccccc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK 222 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~ 222 (326)
|+|+|++..++.....++|..+|+.++..+.+. .+||.. +.+..+..+++.++..+++
T Consensus 117 --------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~-------- 174 (352)
T cd06174 117 --------PPKERGRALGLFSAGFGLGALLGPLLGGLLAES-----LGWRWL-FLILAILGLLLALLLLFLL-------- 174 (352)
T ss_pred --------CccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH-----hhHHHH-HHHHHHHHHHHHHHHHHHH--------
Confidence 778999999999999999999999998887653 357763 4444444444444443333
Q ss_pred ccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHHHHH
Q 020422 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAIS 300 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~~~g 300 (326)
|+++......+.......... .+.+.+..+ +.+..+.+......+++..++
T Consensus 175 --------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 227 (352)
T cd06174 175 --------------------------RLLLLLALAFFLLSFGYYGLL-TYLPLYLQEVLGLSAAEAGLLLSLFGLGGILG 227 (352)
T ss_pred --------------------------HHHHHHHHHHHHHHhHHHHHH-HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 111222111111111111111 122222222 455667889999999999999
Q ss_pred HHHhhhhhhh--hhh-HHhHHHHHh
Q 020422 301 LLGFATFFSV--HSL-LVGLPLVFH 322 (326)
Q Consensus 301 ~~~~G~l~Dr--R~~-~~~~g~~~~ 322 (326)
..+.|+++|| ||+ .+..+.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (352)
T cd06174 228 ALLGGLLSDRLGRRRLLLLIGLLLA 252 (352)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 9999999999 666 666555544
No 76
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.76 E-value=4.1e-16 Score=144.50 Aligned_cols=227 Identities=9% Similarity=0.042 Sum_probs=137.6
Q ss_pred hhhHHHHHHHh-----chhhHH-HHHhHHHHHHHHHh-hh---hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 76 SLVASLVVRVL-----GSKNAL-ILGTTGYWLFVAAN-LF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 76 ~l~~g~l~d~~-----Grr~~l-~~g~~~~~~~~~~~-~~---~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
.++.|+++||+ |||+.+ +.+.+..++..... +. .+.+.+...+++.|++.+...++..+++.|+.
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~----- 112 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEIL----- 112 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 88999999998 899975 55666555554332 33 34555666677888888888888888898886
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC---CCCCCchhHHHHHHHHHHHHHHHHHH-hccCCccccc
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSGTTLLFIVFLGVITLGTILMC-FLRKEEDKGE 221 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~---~~~~~wr~~~f~~~~~~~~l~~il~~-~l~~~~~~~~ 221 (326)
|+++|+++.|+...+..+|..+|+.++..+..... ...++||.. |++.++..++..++.+ ..||+.++++
T Consensus 113 -----~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~-f~i~ai~~l~~~~~~~~~~~e~~~~~~ 186 (356)
T TIGR00901 113 -----SDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI-FFWTALLILPGLLVTLFLAKEPQEDAS 186 (356)
T ss_pred -----CHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH-HHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 88999999999999999999999998877654321 112349874 5555554444444433 3466433211
Q ss_pred cccccccchhhchHHHHHHHHHHhhhcch---hHHHHHHHHHhhHHHHHhhhcccccccccccCcchHHHHHHHHH-HHH
Q 020422 222 KETADASVNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYG-AFD 297 (326)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g-i~~ 297 (326)
+++ ++..+.++.+ .+.++++. .+.+....+............+++.....+.+.++.+......+ ++.
T Consensus 187 -~~~----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~g~~~~~~~~~~~ 258 (356)
T TIGR00901 187 -VPK----PLTQAVLKPI---REFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEEIALVAKINGLLGA 258 (356)
T ss_pred -cch----hHHHHHHHHH---HHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhHHHHHHHH
Confidence 100 0111222222 23445554 44433332222222222222233333223455667787777666 467
Q ss_pred HHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 298 AISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 298 ~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
.++.+++|+++|| ||+.++.+.++
T Consensus 259 ~~g~~~~g~l~~r~g~~~~l~~~~~~ 284 (356)
T TIGR00901 259 ILGGLIGGIIMQPLNILYALLLFGIV 284 (356)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 7899999999999 66665555544
No 77
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.75 E-value=8.5e-17 Score=147.20 Aligned_cols=261 Identities=12% Similarity=0.064 Sum_probs=168.2
Q ss_pred CccccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHH----HHHhhhhhhHHHHHHHhchhhHHHHHhH
Q 020422 22 TPKNYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILY----TSFTCFSLVASLVVRVLGSKNALILGTT 97 (326)
Q Consensus 22 ~~~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~----~~~~~~~l~~g~l~d~~Grr~~l~~g~~ 97 (326)
+++...||.++-.+.+...|......+.+...++.+.+++....+.+. ++-++.-++.|.+.||||.|++...+.+
T Consensus 8 ~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~ 87 (417)
T COG2223 8 GKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSML 87 (417)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHH
Confidence 455677788877777777777777777777777766655554433333 3445556789999999999999999988
Q ss_pred HHHHHHHHh-h---hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHH
Q 020422 98 GYWLFVAAN-L---FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (326)
Q Consensus 98 ~~~~~~~~~-~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G 173 (326)
+..+-+... + .++++.+++.+++.|++.|-+-.+ ..+++.++ |||++|.+.|++. ..++|..+.
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~-m~~~s~~f----------P~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVG-MPNASFFF----------PKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcc-cccccccC----------ChhhhhHHHHHhc-cccccHHHH
Confidence 766644432 2 456679999999999999865444 45777776 8999999999998 777888777
Q ss_pred HHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH-HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhH
Q 020422 174 NLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML 252 (326)
Q Consensus 174 ~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~-il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (326)
..++..+..... ...|+.. -.++....++.. ..++.+.|.++.+. ..+ +..+ . +++...++++.|
T Consensus 156 q~~~P~v~~~~g--~~~w~~~-~~i~~~~l~v~~v~~~~~~~d~p~~r~-~~~-----~~~~--~---~~~~v~~~~~~W 221 (417)
T COG2223 156 QLVAPLVAVAFG--FLAWRNV-AGIYVVALAIAAVLAWLGMNDVPEHRA-SVK-----PQLP--A---QLKAVFSNKDTW 221 (417)
T ss_pred HHHHHHHHHHHh--hHHHHHH-HHHHHHHHHHHHHHHHHHhCCChhhhc-ccc-----ccch--h---HHHHHhcCcchH
Confidence 777665544320 0027663 333444444433 34455666444211 100 0000 2 223556788888
Q ss_pred HHHHHHHHh-hHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 253 LIIPLFAYS-GLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 253 ~l~~~~~~~-g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
.+....+.+ |-...+ . .+.+++..+ +.+....|.....+.+.+.+...++|+++||
T Consensus 222 ~lsllY~~tFG~Fvgf-s-~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR 280 (417)
T COG2223 222 LLSLLYFATFGGFVGF-S-AYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDR 280 (417)
T ss_pred HHHHHHHHHHHHHHHH-H-HHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhh
Confidence 877654433 222222 2 233343333 3445566777888888888999999999999
No 78
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.75 E-value=1.3e-15 Score=143.68 Aligned_cols=224 Identities=12% Similarity=0.090 Sum_probs=141.1
Q ss_pred hhhhhhHHHHHHHh-----chhh-HHHHHhHHHHHHHHH-hhh---hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 73 TCFSLVASLVVRVL-----GSKN-ALILGTTGYWLFVAA-NLF---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 73 ~~~~l~~g~l~d~~-----Grr~-~l~~g~~~~~~~~~~-~~~---~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
.+.+++.|+++||+ |||+ .+.++.++.++.... .+. ++++.++...++.++..+...++..+++.++.
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~-- 123 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVL-- 123 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 46788999999999 8876 677766666554443 233 35666777777888888888888888899886
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccccc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK 222 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~ 222 (326)
|++||+++.++...+.++|..+|+.++..+.... .+||.. |++.++..++..+..+++||+++++++
T Consensus 124 --------~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~----~gw~~~-f~i~a~~~l~~~l~~~~~~e~~~~~~~ 190 (402)
T PRK11902 124 --------HPEERGAGAAVKVLGYRLAMLVSGGLALWLADRV----LGWGNT-YLLMAGLMLAGALTTLWAPEPEVPARP 190 (402)
T ss_pred --------ChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcc----cCHHHH-HHHHHHHHHHHHHHHHhcCCCcccccc
Confidence 8889999999999999999999988877765421 379874 545455444444444566765432211
Q ss_pred ccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc-cccCcchHHHHHHHHHH-HHHHH
Q 020422 223 ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT-PALGVSGVGGAMAVYGA-FDAIS 300 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~gi-~~~~g 300 (326)
++ +.+.+. .++..+.+|+|.++.+....+.......+.....++.+.. .+.+.++.++.+...+. +..++
T Consensus 191 ~~-----~~~~~~---~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g 262 (402)
T PRK11902 191 PR-----SLGEAV---VGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVG 262 (402)
T ss_pred cc-----hhHHHH---HHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHH
Confidence 10 001111 2234466788887765443332222211111122222222 34556677887766554 57889
Q ss_pred HHHhhhhhhh--hhhHHhHHH
Q 020422 301 LLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 301 ~~~~G~l~Dr--R~~~~~~g~ 319 (326)
..++|++.|| ||+.+..+.
T Consensus 263 ~~~~g~l~~r~g~~~~l~~~~ 283 (402)
T PRK11902 263 ALAGGTLMVRLGLYRSLMLFG 283 (402)
T ss_pred HHHHHHHHHHHhHHHHHHHHH
Confidence 9999999999 455444433
No 79
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.75 E-value=4e-16 Score=146.24 Aligned_cols=263 Identities=12% Similarity=-0.025 Sum_probs=153.3
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhcCCCCchhH----HHHHHHHHHhhhhhhHHHHHHHhchh----hHHHHHhHHHHHHHH
Q 020422 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGSK----NALILGTTGYWLFVA 104 (326)
Q Consensus 33 l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~----~~~~~~~~~~~~~l~~g~l~d~~Grr----~~l~~g~~~~~~~~~ 104 (326)
....+++.+.++.......+....+.+.+.. ..+...+...+++++.|++.||+||| +.+.++..+..+ ..
T Consensus 9 ~~~~~~~~~~~~g~~~p~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~ 87 (382)
T PRK11128 9 LALSYFGYFFAYGVFLPFWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV-AF 87 (382)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-HH
Confidence 3444555555544443332223223232222 24555556677789999999999983 333333222211 11
Q ss_pred HhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCC
Q 020422 105 ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 184 (326)
Q Consensus 105 ~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~ 184 (326)
....++++.++..|.+.|++.+..++...++..++ +++|+++.+......++|..+||++++.+...
T Consensus 88 ~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~------------~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~- 154 (382)
T PRK11128 88 WFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW------------QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSW- 154 (382)
T ss_pred HHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH------------HhhccCCcchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 22457888888899999999998888766666554 24577878888888899999999999888654
Q ss_pred CCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHH
Q 020422 185 KGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ 264 (326)
Q Consensus 185 ~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~ 264 (326)
.+||.. |++..+..++..+..++.||++++++++ ++.++. .++..+.+|||+++......+..+..
T Consensus 155 ----~g~~~~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---~~~~~~i~~~~~~~~~~~~~~l~~~~ 220 (382)
T PRK11128 155 ----FGEQAI-LWILTAGVASMLLGQLLRPTIMPQGESR------QQESAG---WPAWKALLKEPTVWRFLLCVSLLQGS 220 (382)
T ss_pred ----cChhHH-HHHHHHHHHHHHHHHHccCCCCCccccc------cccccc---cchHHHHHcChhHHHHHHHHHHHHHH
Confidence 479874 4444433333333333444432211111 000000 12234677888888655443333322
Q ss_pred HHHhhhcccccccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhh
Q 020422 265 QAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHL 323 (326)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~ 323 (326)
.......++++..+.+.+.+..|.......++..++..+.|++.|| +|+.+..+.+...
T Consensus 221 ~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~ 281 (382)
T PRK11128 221 HAAYYGFSAIYWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGV 281 (382)
T ss_pred hHhHHHHHHHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 2222222333332234555577888888888888889999999999 5665665655443
No 80
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.74 E-value=6.6e-16 Score=145.39 Aligned_cols=271 Identities=14% Similarity=0.092 Sum_probs=150.9
Q ss_pred hhHHHHHHHHHHHHHHHHhHHhh-----hhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHH
Q 020422 28 RDVHILSCAFLLIFLAYGAAQNL-----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (326)
Q Consensus 28 ~~~~~l~l~~~~~~~~~~~~~~l-----~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~ 102 (326)
++.+.+....++++.++...... .++++.+...-....++..++..+++++.|+++||+|||+.++.+.+++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~ 81 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVL 81 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 35566666666665555443322 2223333222223356666777888999999999999999998877665443
Q ss_pred HHHh----hhh-----hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHH
Q 020422 103 VAAN----LFP-----SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVG 173 (326)
Q Consensus 103 ~~~~----~~~-----~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G 173 (326)
.... ..+ .+...++.|++.|++.+...+....+..+.. +++++..|......++|..+|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~------------~~~~~~~g~~~~~~~~g~~~g 149 (396)
T TIGR00882 82 FAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS------------RNSNFEYGKARMFGCVGWALC 149 (396)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh------------hhcccccchhhhhcccHHHHH
Confidence 3221 111 2334455677888887776666555554432 234556666677778999999
Q ss_pred HHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh-ccCCccccccccccccchhhchHHHHHHHHHHhhhcchhH
Q 020422 174 NLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML 252 (326)
Q Consensus 174 ~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (326)
+++++.+.. .+|+. .|++.+.+.++..++.++ .+|++++++.+.+...++++ ++.++..+.+|||+++
T Consensus 150 ~~~~g~l~~------~~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~ 218 (396)
T TIGR00882 150 ASIAGILFS------IDPQI-VFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASA----FSLKLALELFRQRKFW 218 (396)
T ss_pred HHHHhhhhc------cCchH-HHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCC----CCHHHHHHHHcCCcHH
Confidence 999876642 36876 354545555544433333 33332211111000000011 1123345677888876
Q ss_pred HHHHHHHHhhHHHHH---hhhccccccc-ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 253 LIIPLFAYSGLQQAF---VWAEFTKEIV-TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 253 ~l~~~~~~~g~~~~~---~~~~~~~~~~-~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
......+........ ....|.+.+. .++.+.+..|.......+...++....|++.|| ||+.++.+.++
T Consensus 219 ~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l 293 (396)
T TIGR00882 219 MFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTI 293 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHH
Confidence 554432222111111 1112222221 123344567888888888889999999999999 66666665543
No 81
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.74 E-value=1e-17 Score=151.64 Aligned_cols=225 Identities=17% Similarity=0.119 Sum_probs=167.2
Q ss_pred CCchhHHHHHHHHHHhhhh----hhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhh
Q 020422 58 GNLGTISLGILYTSFTCFS----LVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGE 132 (326)
Q Consensus 58 ~~~g~~~~~~~~~~~~~~~----l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~ 132 (326)
.+..+...++++..+++.| ++.|.+.||+|+|..+++|.+.....++.+ +..+++.++++|.+||+|.+..+++.
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 4455556778888887776 567899999999999999999988888876 78899999999999999999999999
Q ss_pred hHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 020422 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (326)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~ 212 (326)
.+.+++.++ +++|||+++|+...+.++|-.+||.+++++.+.. | ....|++.+.+.++...+-++
T Consensus 181 lamlAd~f~---------~d~er~~vmGialgfislG~lvgPpfGGilYe~~-----G-k~aPFlVL~~v~Lld~~L~l~ 245 (464)
T KOG3764|consen 181 LAMLADVFP---------EDNERGSVMGIALGFISLGVLVGPPFGGILYEFA-----G-KSAPFLVLAIVLLLDGALQLL 245 (464)
T ss_pred HHHHHHHcc---------cchhhhHHHHHHHHHHhccceecCCcccchHhhc-----C-CcCcHHHHHHHHHHHHHHHHh
Confidence 999988863 6778999999999999999999999999987653 2 344688888888776666666
Q ss_pred ccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccC-cc-hHHHHH
Q 020422 213 LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VS-GVGGAM 290 (326)
Q Consensus 213 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~ 290 (326)
+-|+.+.++++. .+.++ +++.++||..+........+++..++.-..+ +.+..+.+. +. ++|.+.
T Consensus 246 vi~p~~~~~~~~-----~~~~~-------~~~Ll~dP~I~~~agai~~~n~~lafLePtl-slwm~e~m~~p~w~~G~~f 312 (464)
T KOG3764|consen 246 VIEPTEMDPDST-----EQGTP-------MWSLLMDPYILLIAGAITFSNSSLAFLEPTL-SLWMLETMFTPGWEVGLAF 312 (464)
T ss_pred eeCccccCcccc-----ccCcc-------HHHHHhCchHhhhhcchhhccchHHHhCccc-HHHHHHhccCCCcceeeee
Confidence 555433222110 11222 3467788998886655556666666643222 222223332 33 567777
Q ss_pred HHHHHHHHHHHHHhhhhhhh
Q 020422 291 AVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 291 ~~~gi~~~~g~~~~G~l~Dr 310 (326)
....+.-.+++.+.|.++||
T Consensus 313 Lp~~~~y~ig~~lfg~la~k 332 (464)
T KOG3764|consen 313 LPASLSYAIGTNLFGKLADK 332 (464)
T ss_pred cccccchhccCchHHHHHHh
Confidence 77788888999999999999
No 82
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.73 E-value=4.6e-16 Score=147.63 Aligned_cols=275 Identities=13% Similarity=0.060 Sum_probs=145.1
Q ss_pred hhHHHHHHHHHHHHHHHHhHH-hhhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHH
Q 020422 28 RDVHILSCAFLLIFLAYGAAQ-NLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (326)
Q Consensus 28 ~~~~~l~l~~~~~~~~~~~~~-~l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~ 102 (326)
++.+.+.+.+++.+.++.... .+...+..+.+.+. ...++......+++++.|+++||+|||++++++..+.++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~ 89 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVL 89 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHH
Confidence 456666666666655544332 22222222222222 2356666777888999999999999999998876655443
Q ss_pred HHHhh----hhhhH-HHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH
Q 020422 103 VAANL----FPSWY-TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (326)
Q Consensus 103 ~~~~~----~~~~~-~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~ 177 (326)
..... .+.+. .......+.|+..+..+.+....+.++.++ .++++|+.+|......++|..+|+.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~g~~~g~~~~~~~~g~~i~~~~~ 161 (420)
T PRK09528 90 FGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER--------VSRRSGFEYGRARMWGSLGWALCAFIA 161 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH--------HHhhccccchhhHHhhhHHHHHHHHHH
Confidence 32111 11111 011122333433333333322223333322 134567788888888899999999998
Q ss_pred HHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHH
Q 020422 178 LAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL 257 (326)
Q Consensus 178 ~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 257 (326)
+.+.. .+|+. .|.+..+..++..++.+++++++++++++.++.+.+++ +...++..+.+|||+++.+...
T Consensus 162 g~l~~------~~~~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~l~l~ 231 (420)
T PRK09528 162 GILFN------INPQI-NFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS---AVSLKDALALLKLPKFWFLVLY 231 (420)
T ss_pred HHHHh------cCchH-hHHHHHHHHHHHHHHHhcccccccchhhhccchhcccc---cccHHHHHHHccCCCeEeehHH
Confidence 77753 25765 35554555555444444444333222111000000011 1123444567788887654433
Q ss_pred HHHhhHHHHHhhhccccc----ccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 258 FAYSGLQQAFVWAEFTKE----IVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 258 ~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
..............++.. +.+.+.+.+..+.+.....++..++.++.|+++|| ||+.+..+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~ 300 (420)
T PRK09528 232 VIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGT 300 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHH
Confidence 222221111111112211 11223444567888888888999999999999999 6665555444
No 83
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=3.9e-16 Score=152.02 Aligned_cols=245 Identities=16% Similarity=0.080 Sum_probs=154.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+..+++-+++++++|+++|++|||++++++.+.+.+..+.. .++|+..++++|++.|+|.|........|++|++
T Consensus 95 ~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEia--- 171 (513)
T KOG0254|consen 95 TSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIA--- 171 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcC---
Confidence 456666778889999999999999999999999998887765 8899999999999999999999999999999997
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccc---
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG--- 220 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~--- 220 (326)
|++.||...+.++....+|..+|..++...-.. ..+||.. +.+..+.+++-.+..+++||+++..
T Consensus 172 -------p~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~----~~~Wr~~-~~~~~i~~~~~~~~~~~~pesp~~L~~~ 239 (513)
T KOG0254|consen 172 -------PAHIRGTLVSLYQLFITIGILLGYCINYGTSKV----YAGWRIP-LGLALIPAVILALGMLFLPESPRWLIEK 239 (513)
T ss_pred -------ChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccC----CccHHHH-HHHHHHHHHHHHHHHHhCCCChHHHHHc
Confidence 889999999999888888888885555444211 1479864 4343444444334477888876521
Q ss_pred -cccccc-------c--cchhh---chHHHH-HHH--------HHHhhhcchhHH-HHHHHHHhhHHHHH---hhhcccc
Q 020422 221 -EKETAD-------A--SVNFY---SYLVSL-SKS--------ITTLLADVRMLL-IIPLFAYSGLQQAF---VWAEFTK 274 (326)
Q Consensus 221 -~~~~~~-------~--~~~~~---~~~~~~-~~~--------~~~~~~~~~~~~-l~~~~~~~g~~~~~---~~~~~~~ 274 (326)
+.+..+ . +.+.. ...+.+ ..+ .++.+..|+.+. .........+++.. ....|.+
T Consensus 240 g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~ 319 (513)
T KOG0254|consen 240 GRLEEAKRSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYST 319 (513)
T ss_pred CChHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehH
Confidence 100000 0 00000 000100 000 011111122222 22222222222211 1112333
Q ss_pred cccccccCcchH-HHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhhcC
Q 020422 275 EIVTPALGVSGV-GGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHLSL 325 (326)
Q Consensus 275 ~~~~~~~~~~~~-g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~~~ 325 (326)
.+.. ..+.+.. .......++...++..++..+.|| ||++++.|...+..|
T Consensus 320 ~if~-~~g~~~~~~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~ 372 (513)
T KOG0254|consen 320 TIFK-SAGLKSDTFLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSIC 372 (513)
T ss_pred HHHH-hcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHH
Confidence 3322 2222211 555667788888899999999999 999999888776654
No 84
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.70 E-value=2.7e-15 Score=145.07 Aligned_cols=180 Identities=8% Similarity=0.017 Sum_probs=122.3
Q ss_pred cccCccccchhHHHHHHHHHHHHHHHH-hHH----hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHH-hchhhHH
Q 020422 19 QVLTPKNYTRDVHILSCAFLLIFLAYG-AAQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRV-LGSKNAL 92 (326)
Q Consensus 19 ~~~~~~~~~~~~~~l~l~~~~~~~~~~-~~~----~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~-~Grr~~l 92 (326)
.|.|.++.+|.++.+....+..-.+|. ... .++++++.+.+...+..+.......+..+++|+++|| +|||+++
T Consensus 5 ~~~~~~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~ 84 (489)
T PRK10207 5 APMGLLQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTI 84 (489)
T ss_pred CCcchhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHH
Confidence 567777777888877766555533333 222 3334444332222222333333445556789999999 9999999
Q ss_pred HHHhHHHHHHHHHh-hhhh-hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCccc--chhhHHHHHHHHHHH
Q 020422 93 ILGTTGYWLFVAAN-LFPS-WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT--VIGSFNGEFWGMFAS 168 (326)
Q Consensus 93 ~~g~~~~~~~~~~~-~~~~-~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~--~rg~~~gi~~~~~~~ 168 (326)
++|.+++++..... +.++ ...++++|+++|+|.|...++..+.+++.+ |++ +|++++++++.+.++
T Consensus 85 ~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~----------p~~~~~~~~~~~~~~~~~ni 154 (489)
T PRK10207 85 VLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCY----------PPKDPRLDGAFTLFYMSINI 154 (489)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhc----------CCCchhhhcchhHHHHHHHH
Confidence 99999998877654 5544 334557899999999999998888999887 444 568899999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 169 g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
|..+|+.+++.+.+. .|||+. |++..+..+++++...+.+
T Consensus 155 g~~~g~~l~g~l~~~-----~gw~~~-F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 155 GSLISLSLAPVIADK-----FGYSVT-YNLCGAGLIIALLVYFACR 194 (489)
T ss_pred HHHHHHHHHHHHHHh-----hChHHH-HHHHHHHHHHHHHHHHHcc
Confidence 999999999888664 479874 4443322233333333444
No 85
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.67 E-value=4.2e-14 Score=133.11 Aligned_cols=215 Identities=13% Similarity=0.052 Sum_probs=117.6
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHH-HhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 71 SFTCFSLVASLVVRVLGSKNALIL-GTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~-g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
.+.++++++++ .||+|||+.++. +.+..++..... ++++++.+++.+.+.|...+..++....+..+..
T Consensus 64 ~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 134 (393)
T PRK15011 64 GILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHA-------- 134 (393)
T ss_pred HHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh--------
Confidence 44455555666 999999987654 444444444333 5677777665555555445566666666666553
Q ss_pred CCcccch--hhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccccccc
Q 020422 149 LHEGTVI--GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETA 225 (326)
Q Consensus 149 ~~~~~~r--g~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~~~~~~ 225 (326)
++++| +...++...+.++|..+|+++++.+.+. .|||. .|.+.++..++..++ .+++||++++++++.
T Consensus 135 --~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~-----~gw~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (393)
T PRK15011 135 --DKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG-----FSFTV-MYLSAAVAFIVCGVMVWLFLPSMRKELPLAT- 205 (393)
T ss_pred --hhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-----cChHH-HHHHHHHHHHHHHHHHHhhcCccCCCCcccc-
Confidence 33333 4455778888899999999999887653 47986 455555544443333 445676543221110
Q ss_pred cccchhhchHHHHHHHHHHhhhcch-hHHHHHH-HHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHHHHHH
Q 020422 226 DASVNFYSYLVSLSKSITTLLADVR-MLLIIPL-FAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFDAISL 301 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~-~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~~~g~ 301 (326)
+ + .+..+ ++++ .+..... ....+.... +. .+.|.+..+ +.+..+.+.......++..++.
T Consensus 206 -----~--~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~-~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~ 269 (393)
T PRK15011 206 -----G--T-LEAPR------RNRRDTLLLFVICTLMWGTNSL-YI-INMPLFIINELHLPEKLAGVMMGTAAGLEIPTM 269 (393)
T ss_pred -----c--c-ccccc------cccccHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 00000 1222 1111111 111111111 11 222333222 3455567777766667778889
Q ss_pred HHhhhhhhh--hhhHHhHHH
Q 020422 302 LGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 302 ~~~G~l~Dr--R~~~~~~g~ 319 (326)
++.|+++|| ||+.+..+.
T Consensus 270 ~~~G~l~dr~g~~~~~~~~~ 289 (393)
T PRK15011 270 LIAGYFAKRLGKRFLMRVAA 289 (393)
T ss_pred HHHHHHHHHhChHHHHHHHH
Confidence 999999999 665555544
No 86
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.67 E-value=3e-14 Score=135.30 Aligned_cols=270 Identities=10% Similarity=-0.033 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHhH-HhhhhhhcCCCCchh----HHHHHHHHHHhhhhhhHHHHHHHhch-hhHHHHHhHHHHHHHH
Q 020422 31 HILSCAFLLIFLAYGAA-QNLETTVNTEGNLGT----ISLGILYTSFTCFSLVASLVVRVLGS-KNALILGTTGYWLFVA 104 (326)
Q Consensus 31 ~~l~l~~~~~~~~~~~~-~~l~~~l~~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~Gr-r~~l~~g~~~~~~~~~ 104 (326)
.-+++.+++.+..+... ..+...+.++.+.+. +-.++...+..+++++.|.++||+|| |+++.++.++.++...
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 5 AKLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 34566666666655543 233333322222222 22466667778889999999999965 7788877776655554
Q ss_pred Hh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 105 AN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 105 ~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
.. +.++++.+.+.|++.|++.++..+...+.......++. +|......|.|..| .+|..+|+++++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g--~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~ 156 (418)
T TIGR00889 85 FAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAG--LDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIE 156 (418)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcC--CCchhcCCCeeeeh------hHHHHHHHHHHHHhccc
Confidence 43 56788888889999999887776655443333322111 01113334566666 36778888877665221
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHH-HHHHHhhhcchhHHHHHHHHHhh
Q 020422 184 DKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLS-KSITTLLADVRMLLIIPLFAYSG 262 (326)
Q Consensus 184 ~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~g 262 (326)
..|+. |.+..+..++..++.+++||++++++++ + .+.+++. .+..+.+|+|+++.+....+..+
T Consensus 157 -----~~~~~--f~~~~~~~~~~~~~~~~~~e~~~~~~~~--~------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 221 (418)
T TIGR00889 157 -----LSNIQ--LYITAGSSALLGVFALTLPDIPVAKSTA--K------MSIKVMLGLDAFILFKNKRMAIFFFFSMLLG 221 (418)
T ss_pred -----chhHH--HHHHHHHHHHHHHHHhcCCCCCCCcccc--c------cCHHHHhhhhHHHHhcCCCeeeHHHHHHHHH
Confidence 23443 4444444444444556677753221111 0 0111110 12235678888776555544443
Q ss_pred HHHHHhhhcccccccccc--------cCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhh
Q 020422 263 LQQAFVWAEFTKEIVTPA--------LGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHL 323 (326)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~--------~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~ 323 (326)
.........+++...+.+ ...+..+..+....+...++..+.|+++|| ||+++..+.++..
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~ 292 (418)
T TIGR00889 222 APLQITNIFGNGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWA 292 (418)
T ss_pred hHHHHHHHhHHHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 322222222222221111 234567888888899999999999999999 7777766665543
No 87
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.3e-14 Score=140.08 Aligned_cols=263 Identities=13% Similarity=0.035 Sum_probs=163.0
Q ss_pred HHHHHHHHHHHHHHHHh---HH----hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHH
Q 020422 30 VHILSCAFLLIFLAYGA---AQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLF 102 (326)
Q Consensus 30 ~~~l~l~~~~~~~~~~~---~~----~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~ 102 (326)
|+++..+|+.....+.. .+ .++++++.+.+...+..++...+..++.++.+.+.||+|.|.+.++|.++.++.
T Consensus 45 WvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g 124 (509)
T KOG2504|consen 45 WVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALG 124 (509)
T ss_pred eeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHH
Confidence 44444445444433332 22 344444444444444567777788888999999999999999999999988876
Q ss_pred HHH-hhhhhhHH-HHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 103 VAA-NLFPSWYT-MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 103 ~~~-~~~~~~~~-l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
.+. .++++.+. ++...++.|+|.|+.+..+...+..+ .+++|+.+.|+-..+..+|.++=+.+...+
T Consensus 125 ~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~Y-----------F~kkR~lA~Gia~~GsG~G~~~~~~l~~~l 193 (509)
T KOG2504|consen 125 LLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTY-----------FEKKRALATGIAVSGTGVGTVVFPPLLKYL 193 (509)
T ss_pred HHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhH-----------hHHHHHHHHhhhhccCCcceeeHHHHHHHH
Confidence 665 47777654 44568999999999999888888766 678999999999888888877766666565
Q ss_pred hcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc-ccc----------------------ccccccccc-h------
Q 020422 181 LKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE-DKG----------------------EKETADASV-N------ 230 (326)
Q Consensus 181 ~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~-~~~----------------------~~~~~~~~~-~------ 230 (326)
... .|||.. ++++..+.+-.++..+.+++.. +.+ +...++... .
T Consensus 194 ~~~-----~G~r~~-~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (509)
T KOG2504|consen 194 LSK-----YGWRGA-LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSN 267 (509)
T ss_pred HHH-----hCcHHH-HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccc
Confidence 543 479885 3344554443444444444311 100 000000000 0
Q ss_pred ------hhchH---HHHHHHH---HHhhhcchhHHHHHHHHHhhHHHHHhhhcccccc-cccccCcchHHHHHHHHHHHH
Q 020422 231 ------FYSYL---VSLSKSI---TTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI-VTPALGVSGVGGAMAVYGAFD 297 (326)
Q Consensus 231 ------~~~~~---~~~~~~~---~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~gi~~ 297 (326)
.+..+ .++.... .+.++|+.++.+.....+.-+..... ..+.+.+ .+.+.+.++...++...++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p-~~~l~~~~~~~g~~~~~aa~l~Siigi~~ 346 (509)
T KOG2504|consen 268 LATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVP-FVYLPSYAKSLGLSSNDAAFLLSIIGVSD 346 (509)
T ss_pred hhhhhhCCccccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHH-HHHHHHHHhhcCCChhhhHHHHHHHHHhh
Confidence 00000 1111111 36788888877654433222111111 1222332 244566668899999999999
Q ss_pred HHHHHHhhhhhhh
Q 020422 298 AISLLGFATFFSV 310 (326)
Q Consensus 298 ~~g~~~~G~l~Dr 310 (326)
.+|.++.|.++|+
T Consensus 347 i~gRi~~G~laD~ 359 (509)
T KOG2504|consen 347 IIGRIILGLLADK 359 (509)
T ss_pred hhhhhhhhhhcCc
Confidence 9999999999999
No 88
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.61 E-value=1.9e-13 Score=124.79 Aligned_cols=239 Identities=14% Similarity=0.122 Sum_probs=161.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhh----hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~----~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
...+|.+|.+++++++.+.+|+|+|+.+++|..++++....+. ..+|..++++-++.|.|.+.+-++.+.|++...
T Consensus 54 qfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg 133 (422)
T COG0738 54 QFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLG 133 (422)
T ss_pred HHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC
Confidence 4667788999999999999999999999999999988877653 346778778889999999999999999999997
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCC-----C-C--------CCCCchhHHHHHHHHHHHHH
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-----K-G--------GSTSGTTLLFIVFLGVITLG 206 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~-----~-~--------~~~~wr~~~f~~~~~~~~l~ 206 (326)
++++-.+.+++.+..+.+|.++||+++..+.... + . .-..|+. +|.......++-
T Consensus 134 ----------~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~-pYl~~~~~lvll 202 (422)
T COG0738 134 ----------KPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQF-PYLILAGLLVLL 202 (422)
T ss_pred ----------CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhh-HHHHHHHHHHHH
Confidence 6667788899999999999999999986655420 0 0 0012333 354444444433
Q ss_pred HHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHH-HHHHHHhhHHHHHhhhcccccccc-cccCcc
Q 020422 207 TILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI-IPLFAYSGLQQAFVWAEFTKEIVT-PALGVS 284 (326)
Q Consensus 207 ~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~ 284 (326)
.++....|.|+.++.++ ++ .+..+. ...+.+++|..++- ...++|.|.+.+... .+..+... .+.+.+
T Consensus 203 ~v~~~~~k~p~~~~~~~-~~---~~~~~~-----~~~~l~~~~~~~~gvl~~FlYVG~Eva~gs-fl~~y~~~~~g~~~~ 272 (422)
T COG0738 203 AVLILLSKLPDLQVAAP-SL---GASGSA-----GLSSLFQNKHLRLGVLAIFLYVGAEVAIGS-FLVSYLEELLGLNEQ 272 (422)
T ss_pred HHHHHhccCCcCCcccc-cc---cccccc-----hHHHHHhChHHHHHHHHHHHHHhHHHHHHH-HHHHHHHhcCCccHH
Confidence 33444444443322111 00 011110 12356677777763 456788999877632 33333322 344455
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh---hhhHHhHHHHHhhc
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV---HSLLVGLPLVFHLS 324 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr---R~~~~~~g~~~~~~ 324 (326)
+....+..+..+.++|+.++-++..| +|.+.....+..++
T Consensus 273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill 315 (422)
T COG0738 273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILL 315 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 77888888889999999888888888 56555544443333
No 89
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.59 E-value=2.1e-13 Score=129.67 Aligned_cols=239 Identities=11% Similarity=0.017 Sum_probs=136.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHH----hchhh-HHHHHhHHHHHHHHHh-hhhh------hHHHHHHHHHhhhhhHHHHhhh
Q 020422 65 LGILYTSFTCFSLVASLVVRV----LGSKN-ALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGE 132 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~----~Grr~-~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~g~~~~~~ 132 (326)
.++..+..++.+++.|+++|| +|||+ .++.+.+.+++..+.. ..|+ ...+++.+++.+++.+...+..
T Consensus 41 ~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (437)
T TIGR00792 41 FLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPY 120 (437)
T ss_pred HHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccH
Confidence 344445668889999999998 67744 5666776666555443 3332 2344556778888887765555
Q ss_pred hHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHH-
Q 020422 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTIL- 209 (326)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--~~~~~wr~~~f~~~~~~~~l~~il- 209 (326)
.++..+.. .+++||++..++...+..+|..+++.+...+..... ....+||.. +.+..++.++..++
T Consensus 121 ~al~~~~~---------~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~-~~i~~~l~~~~~~~~ 190 (437)
T TIGR00792 121 WSLVPAIT---------LDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMF-ALVLALIGVVSLIIC 190 (437)
T ss_pred hhCccccc---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHH-HHHHHHHHHHHHHHH
Confidence 55666654 156889999998888888887777665444432111 113578763 44444444443333
Q ss_pred HHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccC-cchHHH
Q 020422 210 MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGG 288 (326)
Q Consensus 210 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~ 288 (326)
.++.||++++.+++ + +++.+.++.+ ++.+++|+++......+.......... .+.+.+.++..+ ....+.
T Consensus 191 ~~~~~e~~~~~~~~-~----~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 261 (437)
T TIGR00792 191 FFGTKERYSEIPKN-I----EKKLSLKQIF---KALFKNDQLLILCLAYLFYNLAFNIKN-GVQVYYFTYVLGDPELFSY 261 (437)
T ss_pred HcCCEecCCCCCcc-c----ccCCCHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHc-chhheeEeeecCChHHHHH
Confidence 34556643221111 0 1112333332 355678887765544333322222111 122333222233 334566
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 289 AMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 289 ~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
......++..++.++.++++|| ||+.+..+.++.
T Consensus 262 ~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~ 297 (437)
T TIGR00792 262 MGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLM 297 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 6667788899999999999999 666666665443
No 90
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.58 E-value=1.2e-13 Score=134.78 Aligned_cols=145 Identities=12% Similarity=0.067 Sum_probs=116.8
Q ss_pred cCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhh
Q 020422 55 NTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEG 133 (326)
Q Consensus 55 ~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~ 133 (326)
..+........++++++..+++++.|+++||+|||++++++.++..++.+.. +++|++.+++.|++.|++.+.......
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~ 193 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGF 193 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhH
Confidence 3344555566889999999999999999999999999999999998888765 899999999999999999999999999
Q ss_pred HHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 020422 134 TYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (326)
Q Consensus 134 ~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l 213 (326)
.+++|+. ++++|+.+..+ ......++.++++.++.+.. +||+. +++.....++.+++.++.
T Consensus 194 ~~~~E~~----------~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------~Wr~~-~~~~~~~~~~~~~~~~l~ 254 (521)
T KOG0255|consen 194 GLVAEIV----------SPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------DWRWL-FWIISIPSGLFLLLWFLP 254 (521)
T ss_pred hhheeec----------CcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------hHHHH-HHHHHHHHHHHHHHHHcc
Confidence 9999986 88999999998 66777777777777766654 69984 444444455444444555
Q ss_pred cCCcc
Q 020422 214 RKEED 218 (326)
Q Consensus 214 ~~~~~ 218 (326)
+|+++
T Consensus 255 ~Es~r 259 (521)
T KOG0255|consen 255 PESPR 259 (521)
T ss_pred CcChH
Confidence 57664
No 91
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=3.3e-14 Score=128.36 Aligned_cols=102 Identities=14% Similarity=-0.030 Sum_probs=87.2
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
+...++++..|.++||+|||++++++.+..+++.... .+.|+..++++|++.|+.-|.+-. .-++++|+.
T Consensus 79 ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v-~rAiisdV~-------- 149 (451)
T KOG2615|consen 79 ILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSV-IRAIISDVV-------- 149 (451)
T ss_pred HHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHH-HHHHHHhhc--------
Confidence 3456677788999999999999999999888866654 677887777889999999997644 457888887
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+||+|++.++.+...+++|.++||.+++.+.+
T Consensus 150 --sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 150 --SEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred --ChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 88999999999999999999999999988876
No 92
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.56 E-value=1.4e-12 Score=125.91 Aligned_cols=138 Identities=9% Similarity=-0.021 Sum_probs=103.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHH-hchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 65 LGILYTSFTCFSLVASLVVRV-LGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~-~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
.+.......++++++|+++|| +|||++++++.+++++..+.. +.++++.++.+|.+.|+|.|...++..+++++..++
T Consensus 54 ~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~ 133 (475)
T TIGR00924 54 FGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYER 133 (475)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCC
Confidence 444445667778899999999 899999999999888766654 566777788899999999999999888899888631
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
. ++++|++++++++.+.++|..+|+++++.+... .+|+.. |.+..+..+++.+.+++.++
T Consensus 134 ~-------~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~-----~g~~~~-f~~~~~~~~~~~l~~~~~~~ 193 (475)
T TIGR00924 134 G-------DMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN-----YGYHVG-FNLAAVGMVIGLLTFFAGRH 193 (475)
T ss_pred C-------CcccccceehhHHHHHHHHHHHHHHHHHHHHHh-----cChHHH-HHHHHHHHHHHHHHHHHccc
Confidence 0 113588999999999999999999998887643 468864 44444434444444444443
No 93
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.55 E-value=1.7e-12 Score=125.96 Aligned_cols=231 Identities=13% Similarity=0.061 Sum_probs=145.9
Q ss_pred HHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH--hh----hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA--NL----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 67 ~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~--~~----~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
...+-..+.++++|.++||+.||++++.+-++.++..+. .+ ..+.+.+++.-++.|++.+...|+..+++.+..
T Consensus 53 a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV 132 (524)
T PF05977_consen 53 ASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELV 132 (524)
T ss_pred HHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334455677889999999999999999888765443222 11 236777888889999999999999999999987
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccc
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKG 220 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~ 220 (326)
|+++...+.++.....+++.++||.+++.+.... |-.. .|.+-++..++.++.....+++.+++
T Consensus 133 ----------~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~-----G~~~-~f~inalsfl~~i~~l~~~~~~~~~~ 196 (524)
T PF05977_consen 133 ----------PKEDLPAANALNSISFNIARIIGPALGGILVAFF-----GAAA-AFLINALSFLISILALLRWKPPPPPS 196 (524)
T ss_pred ----------cHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHH-----HHHH-HHHHHHHHHHHHHHHHHHcccccccc
Confidence 7889999999999999999999999998876532 2222 23332222222222223333322211
Q ss_pred ccccccccchhhchHHHHHHHHHHhh-hcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcchHHHHHHHHHHHH
Q 020422 221 EKETADASVNFYSYLVSLSKSITTLL-ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVSGVGGAMAVYGAFD 297 (326)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~gi~~ 297 (326)
+ . .+++..+.+++-.+.. ++|.++......+..++....++.. .|.+..+ +.+....|+.+..+|+|+
T Consensus 197 ~-~-------~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aL-lPl~a~~~l~~~a~~yGll~a~~gvGa 267 (524)
T PF05977_consen 197 S-L-------PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWAL-LPLFARDVLGGGASGYGLLLAAFGVGA 267 (524)
T ss_pred c-c-------chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHh-hhHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 1 1 1112233344433433 4555554433333333332222322 3444333 345567899999999999
Q ss_pred HHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 298 AISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 298 ~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
.+|+++.+++.+| +++++..+.+..
T Consensus 268 i~Gal~~~~l~~~~~~~~lv~~~~~~~ 294 (524)
T PF05977_consen 268 ILGALLLPRLRRRLSSRRLVLLASLLF 294 (524)
T ss_pred HHHHHHHHHhhcccCcchhhHHHHHHH
Confidence 9999999999998 445555554443
No 94
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.55 E-value=1.9e-12 Score=126.04 Aligned_cols=174 Identities=9% Similarity=0.000 Sum_probs=109.4
Q ss_pred cccccCccccchhHHHHHHHHHHHHH---HHHhH----HhhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchh
Q 020422 17 SLQVLTPKNYTRDVHILSCAFLLIFL---AYGAA----QNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSK 89 (326)
Q Consensus 17 ~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~----~~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr 89 (326)
++.|..+.+.++-+..+....+.+.. ..... ..+..++..+.+....+.+ ..+..++.+++.|.++|.||||
T Consensus 30 ~~~p~g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~diG~~~~~~w~~~~-~~l~~av~~~~~G~LSDlfGRr 108 (599)
T PF06609_consen 30 DELPDGYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINADIGGSDNWSWFSTA-WTLASAVSFPFVGRLSDLFGRR 108 (599)
T ss_pred hhCCCCceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHhcCCCccchHHHHH-HHHHHHHHHHhhHHHHHHhcch
Confidence 44566666665555444333332222 22211 2344455444444554433 3346678889999999999999
Q ss_pred hHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHH
Q 020422 90 NALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (326)
Q Consensus 90 ~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~ 168 (326)
+.++.+.++..+..+.. .++|..+++++-++.|+|.|..... ...++|.. |.+.|+...++.....-.
T Consensus 109 ~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~~~isEl~----------p~k~R~~~~~~~~~~~i~ 177 (599)
T PF06609_consen 109 YFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-ALAISELV----------PNKWRGLGLAIASIPFII 177 (599)
T ss_pred HHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-HHHHHHhc----------ccchhhhHhHHHHHHHHh
Confidence 99999999888877754 7899999999999999998876544 33467775 777887766655444333
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHH
Q 020422 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI 208 (326)
Q Consensus 169 g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~i 208 (326)
....|+.++..+.. ..+|||. |+..++...++.+
T Consensus 178 ~~~~~~~ia~~~~~-----~~~WRw~-~~~~~i~~~i~~v 211 (599)
T PF06609_consen 178 TTWISPLIAQLFAA-----HSGWRWI-FYIFIIWSGIALV 211 (599)
T ss_pred hhcccHHHHHHhcc-----CCCcchH-HHHHHHHHHHHHH
Confidence 33456666544432 2479985 4445555444443
No 95
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.54 E-value=8.4e-18 Score=160.76 Aligned_cols=142 Identities=17% Similarity=0.156 Sum_probs=109.9
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhh---hhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP---SWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~---~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
..+..+++..+++++.|.++||+|||+++..+.++..+..+.. +++ |++.+.++|++.|++.|..++....|+.|.
T Consensus 51 ~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~ 130 (451)
T PF00083_consen 51 LTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEI 130 (451)
T ss_pred HHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3566777788899999999999999999999999888777764 677 899999999999999999999999999999
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
+ |+++||+..++......+|..++.+++....... +..+||.. +....+.+++..+..+++||+++
T Consensus 131 ~----------~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~--~~~~Wr~~-~~~~~~~~l~~~~~~~~~pESP~ 196 (451)
T PF00083_consen 131 A----------PPKHRGFLSSLFQLFWALGILLASLIGYIVSYYS--DNWGWRIL-LIFGAIPSLLVLLLRFFLPESPR 196 (451)
T ss_pred c----------cccccccccccccccccccccccccccccccccc--cccccccc-ccccccccccccccccccccccc
Confidence 7 8899999999988888888887777665442211 13568873 22233333333444577898764
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.54 E-value=9.2e-12 Score=116.97 Aligned_cols=154 Identities=12% Similarity=0.008 Sum_probs=87.5
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccch
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 230 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~ 230 (326)
++++++...+....+..+|..+|+.....+.+. .+||. .|++.+++.++..+..++++|++++++++
T Consensus 127 ~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~-----~gw~~-~f~~~a~l~~~~~~~~~~~~~~~~~~~~~------- 193 (390)
T TIGR02718 127 NGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGK-----FGQRP-AFLLVACVPLASLVCVLWLKDRAVASPEA------- 193 (390)
T ss_pred CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCHHH-HHHHHHHHHHHHHHHHHHcCCCCcCcccc-------
Confidence 555566666767667677777777666565543 47987 35555555555444445555433211110
Q ss_pred hhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcchHHHHHHHHHH-HHHHHHHHhhhhhh
Q 020422 231 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAISLLGFATFFS 309 (326)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gi-~~~~g~~~~G~l~D 309 (326)
++ . ..++..+.+|+|.++......+..........+..++++.+.+.+.+++|......++ ...++..+.|++.|
T Consensus 194 ~~-~---~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~ 269 (390)
T TIGR02718 194 PL-A---RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVR 269 (390)
T ss_pred ch-h---hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 00 0 1123446778888766554433333322222333334443445667788888887775 55567899999999
Q ss_pred h--hhhHHhHHHHH
Q 020422 310 V--HSLLVGLPLVF 321 (326)
Q Consensus 310 r--R~~~~~~g~~~ 321 (326)
| ||+.+..+.++
T Consensus 270 r~g~~~~l~~~~~~ 283 (390)
T TIGR02718 270 RAGLWRTFILGVGL 283 (390)
T ss_pred HhhHHHHHHHHHHH
Confidence 9 55555555443
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.53 E-value=4.3e-12 Score=123.28 Aligned_cols=113 Identities=10% Similarity=0.040 Sum_probs=86.3
Q ss_pred hhhhhHHHHHHH-hchhhHHHHHhHHHHHHHHHh-hh-hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCC
Q 020422 74 CFSLVASLVVRV-LGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 74 ~~~l~~g~l~d~-~Grr~~l~~g~~~~~~~~~~~-~~-~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
...+++|+++|| +|||+++..+.+++++..... ++ +++..++++|++.|+|.|...+...+++++.+++
T Consensus 72 ~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~-------- 143 (500)
T PRK09584 72 GLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK-------- 143 (500)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC--------
Confidence 334689999999 599999999998887665543 44 3456667789999999999888888888888632
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHH
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFL 200 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~ 200 (326)
++++|++++++++.+.++|..+||.+++.+.+. .|||+. |.+..
T Consensus 144 ~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~-----~g~~~~-F~i~~ 187 (500)
T PRK09584 144 DDPRLDGAFTMYYMSINIGSFFSMLATPWLAAK-----YGWSVA-FALSV 187 (500)
T ss_pred CchhhhhcchHHHHHHHHHHHHHHHHHHHHHHh-----hCHHHH-HHHHH
Confidence 223456788999999999999999999888653 478874 44433
No 98
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.53 E-value=6.9e-12 Score=113.10 Aligned_cols=247 Identities=12% Similarity=0.088 Sum_probs=165.9
Q ss_pred hHHhhhhhhcCCCCchhHH----HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHh
Q 020422 46 AAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYL 121 (326)
Q Consensus 46 ~~~~l~~~l~~~~~~g~~~----~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~ 121 (326)
....+.+++..|.++++.. .++-.++++..+++++++.+|+|.++.+..++++.++.++.=...+.+.++..-.+.
T Consensus 30 svgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~~~~~L~~gt~l~ 109 (395)
T COG2807 30 SVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLGGLPLLFLGTLLA 109 (395)
T ss_pred hhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 3445556666666655543 355567889999999999999999999999998877776653333666777788899
Q ss_pred hhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHH
Q 020422 122 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLG 201 (326)
Q Consensus 122 G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~ 201 (326)
|.|.+..-.--.+.+-+. .|++-+..+|+|......|..+++.+...+.++. .+||..+. .-+.
T Consensus 110 G~gIav~nVLLPslIK~~-----------Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~----~gW~~aL~-~WAl 173 (395)
T COG2807 110 GAGIAVINVLLPSLIKRD-----------FPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS----GGWRGALG-FWAL 173 (395)
T ss_pred HhhHHHHHHhhhHHHHhh-----------cccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh----ccHHHHHH-HHHH
Confidence 999987655555555554 5778999999999999999999988887776553 47987422 2344
Q ss_pred HHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccccc
Q 020422 202 VITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL 281 (326)
Q Consensus 202 ~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~ 281 (326)
.++++.+ .++|...+++..+.+ .+. ++-.+.+|+|.-|.+...+=.+.+......+++++++.++++
T Consensus 174 ~allAl~--~WlPq~~r~~~~~~~----~~~-------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~ 240 (395)
T COG2807 174 LALLALL--IWLPQALREQAASIA----TKL-------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGL 240 (395)
T ss_pred HHHHHHH--HHhhhcccccccccc----ccc-------ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC
Confidence 4444433 344553222111100 000 111257788888876554323322222234567777778888
Q ss_pred CcchHHHHHHHHHHHHHHHHHHhhhhhhh---hhhHHhHHHHH
Q 020422 282 GVSGVGGAMAVYGAFDAISLLGFATFFSV---HSLLVGLPLVF 321 (326)
Q Consensus 282 ~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr---R~~~~~~g~~~ 321 (326)
+.++.|.......+.....+++.-.+.+| ||++.+...+.
T Consensus 241 sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~ 283 (395)
T COG2807 241 SAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLL 283 (395)
T ss_pred CHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 88899999999999999999999999987 55555444433
No 99
>PTZ00207 hypothetical protein; Provisional
Probab=99.49 E-value=6.7e-12 Score=122.71 Aligned_cols=129 Identities=13% Similarity=0.129 Sum_probs=94.6
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh------hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~------~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
..+++++++.|++.||+|||+++.++.+++++..+.. ++ ++++.+.+.|++.|+|.+..++++...+.++
T Consensus 72 ~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~--- 148 (591)
T PTZ00207 72 IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSV--- 148 (591)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 3456677889999999999999999999888776653 43 5888999999999999999988887777777
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHH-HHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVG-NLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEE 217 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G-~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~ 217 (326)
.|++||++.|+...+..+|.++. ++....+ .. +|+.. |+..+++.++ +++...++++++
T Consensus 149 --------Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~-~~------~~~~~-fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 149 --------FPSNRGAVVAIMKTFTGLGSAILGSIQLAFF-SD------NTSAY-FFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred --------ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH------hHHHH-HHHHHHHHHHHHHHHHhheeCCc
Confidence 35789999999999999998764 4444433 21 46553 3334444443 344445666654
No 100
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.44 E-value=7.4e-11 Score=113.69 Aligned_cols=243 Identities=12% Similarity=0.058 Sum_probs=144.5
Q ss_pred HHHHHHHhhhhhhHHHHHHHhc-----hhhHHHHHhHHHH-HHHHHh-hhhhhHHHH-HHHHHhhhhhHHHHhhhhHHHH
Q 020422 66 GILYTSFTCFSLVASLVVRVLG-----SKNALILGTTGYW-LFVAAN-LFPSWYTMV-PASLYLGFAASIIWVGEGTYLT 137 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~G-----rr~~l~~g~~~~~-~~~~~~-~~~~~~~l~-~~r~l~G~g~g~~~~~~~~~l~ 137 (326)
+...+.+.+ .++.|+++||++ ||+.++++.++.+ +..... ..++..... ....+.+++.+..-++..++..
T Consensus 68 sl~~lpw~~-K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~ 146 (468)
T TIGR00788 68 GLSSLGWAL-KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYS 146 (468)
T ss_pred HHHHHHHHH-HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 444555555 445999999998 8888888776553 221111 234433333 3678999999998888888888
Q ss_pred HHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 020422 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~ 217 (326)
|..++ +++.++...++.|.....|..+|+.+++.+.+. .+|+.. |.+.+++.++..+..++++|++
T Consensus 147 e~~~~--------~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~-----~~~~~~-f~~~a~l~ll~~~~~~~~~E~~ 212 (468)
T TIGR00788 147 ERIRE--------SPSAGPSLVSWMWGASATGGLISSLLGGPLLDK-----TLTRIL-FLITAALLLLQLFVSNLSKERR 212 (468)
T ss_pred hhhhc--------CCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh-----cCcchH-HHHHHHHHHHHHHHHHhccccc
Confidence 87631 334445566677777778999999998877653 368874 5455555555444556778854
Q ss_pred c-cccccccc-------ccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHH-HHHhhhcccccccccccCcchHHH
Q 020422 218 D-KGEKETAD-------ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-QAFVWAEFTKEIVTPALGVSGVGG 288 (326)
Q Consensus 218 ~-~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~g~ 288 (326)
. ..++..++ .........++++++.++.+++|.++......+..... .......|......-+.+++..|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~ 292 (468)
T TIGR00788 213 AFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGM 292 (468)
T ss_pred ccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhh
Confidence 1 11110000 00000112344456667778888877643332221111 111111111000123566778999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhh
Q 020422 289 AMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHL 323 (326)
Q Consensus 289 ~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~ 323 (326)
.....+++++++..+.+++.+| .|+++..+.++..
T Consensus 293 ~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~ 329 (468)
T TIGR00788 293 SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYT 329 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 9999999999999999999888 5666666665544
No 101
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.39 E-value=1.1e-09 Score=99.42 Aligned_cols=232 Identities=12% Similarity=0.083 Sum_probs=133.1
Q ss_pred CCchhHHHHHHHHH----HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhh
Q 020422 58 GNLGTISLGILYTS----FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEG 133 (326)
Q Consensus 58 ~~~g~~~~~~~~~~----~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~ 133 (326)
.+...-.++.+|.+ .++...+.|.++||+|||+.-+.-.++|++..+.-..++++.++++|++.|++.++++++--
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~~~~L~~GRvlgGiaTSLLfS~FE 143 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSNYPVLLLGRVLGGIATSLLFSAFE 143 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443344445543 24455678899999999999999888888777665678999999999999999999999854
Q ss_pred HH-HHHHhHhhhhhcCCCcccchhhHHHHHH-HHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 134 TY-LTAAALSHASNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 134 ~~-l~~~~~~~~~~~~~~~~~~rg~~~gi~~-~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
++ +.|+ .+ +|+ |++..+..++... ..+.+-.+..++++-.+....+ .+ +..+|..-.++..++.++..
T Consensus 144 sW~V~Eh-~~----~g~-~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~---~g-~vaPF~~a~~~l~~~~~~I~ 213 (354)
T PF05631_consen 144 SWMVHEH-NK----RGF-PQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG---FG-PVAPFDAAIVLLAVAAVLIL 213 (354)
T ss_pred HHHHHHH-HH----cCC-ChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC---CC-CcchHHHHHHHHHHHHHHHH
Confidence 44 4444 33 232 4444555444332 2233333444555544443221 12 23356555555555444333
Q ss_pred hc-cCCccccccccccccchhhchHHHHHHHHH-HhhhcchhHHHHHHHH-HhhHHHHHhhhcccccccccccCcchHHH
Q 020422 212 FL-RKEEDKGEKETADASVNFYSYLVSLSKSIT-TLLADVRMLLIIPLFA-YSGLQQAFVWAEFTKEIVTPALGVSGVGG 288 (326)
Q Consensus 212 ~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~ 288 (326)
.. +|...+.. + +.+..+.+++-. .+.+||+++.+...-. +=+..+.|.. .++|.+..++- .---|+
T Consensus 214 ~~W~ENyg~~~-~--------~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVf-lWtPaL~~~~~-~~P~Gl 282 (354)
T PF05631_consen 214 KTWPENYGDTS-S--------SSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVF-LWTPALDPDDE-ELPLGL 282 (354)
T ss_pred hcccccCCCcc-c--------ccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHhee-eeeceecCCCC-CCCchH
Confidence 22 23221111 1 112222333322 3557899887654422 2233333322 45666642211 113689
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh
Q 020422 289 AMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 289 ~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
++..+-++.++|+.+..++..+
T Consensus 283 IFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 283 IFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999876665
No 102
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.38 E-value=2.8e-10 Score=105.45 Aligned_cols=223 Identities=13% Similarity=0.025 Sum_probs=127.8
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-h--hh----hhhH--HHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-N--LF----PSWY--TMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~--~~----~~~~--~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
.++....+.+-|+.||+|-|..++++...-++.... . .. +.++ ..+.+..+.+.++-.+.......-+.|
T Consensus 90 ~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~W- 168 (480)
T KOG2563|consen 90 VVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVW- 168 (480)
T ss_pred HHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhh-
Confidence 455666777889999999999999999877666543 2 22 2333 455566666666654443333444444
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCC-CCCCCCchhH-HHHHHHHHHHHHHHHHHh-ccCCc
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-KGGSTSGTTL-LFIVFLGVITLGTILMCF-LRKEE 217 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~-~~~~~~wr~~-~f~~~~~~~~l~~il~~~-l~~~~ 217 (326)
++++||..+..+=..++.+|.++|.+++..+..+. +..+.+|-.- +|....+++.+..++..+ .++++
T Consensus 169 ---------F~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P 239 (480)
T KOG2563|consen 169 ---------FPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKP 239 (480)
T ss_pred ---------CCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 49999999999888889999999999988887665 2223445321 122222222222222222 23322
Q ss_pred cccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhc---ccccccccccCcchHHHHHHHHH
Q 020422 218 DKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE---FTKEIVTPALGVSGVGGAMAVYG 294 (326)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~g 294 (326)
+.+....++ . .+..++ .+++++.++++++..+...+ |...+.+++. ..+.+...+.+....|+.....-
T Consensus 240 ~tPps~s~~-~-~~~~~f---~~si~~~~~n~~F~il~~~y---gi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~i 311 (480)
T KOG2563|consen 240 PTPPSASQA-A-LQDASF---PKSIKSCFKNRQFIILAICY---GIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMI 311 (480)
T ss_pred CCCCchhHh-h-hhcCcH---HHHHHHHHcCccHHHHHHHH---hhhHHHHHHHHHHhhhccccccCCccccchhHHHHH
Confidence 211111000 0 011122 34566889999988765432 2211111212 11122111222235677777777
Q ss_pred HHHHHHHHHhhhhhhh
Q 020422 295 AFDAISLLGFATFFSV 310 (326)
Q Consensus 295 i~~~~g~~~~G~l~Dr 310 (326)
+++++++++.|.+.||
T Consensus 312 v~Gmlga~~~gii~Dk 327 (480)
T KOG2563|consen 312 VAGMLGALASGIIADK 327 (480)
T ss_pred HHHHHHHHHHHhhhhh
Confidence 8889999999999999
No 103
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.37 E-value=1.7e-12 Score=119.92 Aligned_cols=108 Identities=16% Similarity=0.093 Sum_probs=87.3
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh---hh----hHHHHHHHHHhhhhhHHHHhhhhHH
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF---PS----WYTMVPASLYLGFAASIIWVGEGTY 135 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~---~~----~~~l~~~r~l~G~g~g~~~~~~~~~ 135 (326)
..++.+++-.++|++.|++.||+|||+++...+++..+.+++. +. ++ ...+...|.++|+|.|+-+|.+.+.
T Consensus 89 Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI 168 (538)
T KOG0252|consen 89 VNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATI 168 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHH
Confidence 3566677778999999999999999999999998888877643 31 12 3466788999999999999999999
Q ss_pred HHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 136 LTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 136 l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.+|.+ .+++||...+...+....|...|.+++..+.
T Consensus 169 ~SE~a----------n~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~ 204 (538)
T KOG0252|consen 169 MSESA----------NKKTRGAFIAAVFAMQGFGILAGGIVALIVS 204 (538)
T ss_pred hhhhh----------hhccccceeEEEEEecchhHhhccHHHHHHH
Confidence 99987 6789999888887777777777776665543
No 104
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.36 E-value=2.1e-10 Score=109.88 Aligned_cols=144 Identities=10% Similarity=-0.004 Sum_probs=82.0
Q ss_pred chhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhH----HHHHHHHHHhhhhhhHHHHHH----HhchhhHHHHHhHH
Q 020422 27 TRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTI----SLGILYTSFTCFSLVASLVVR----VLGSKNALILGTTG 98 (326)
Q Consensus 27 ~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~----~~~~~~~~~~~~~l~~g~l~d----~~Grr~~l~~g~~~ 98 (326)
.+.++.++..++.+..++.......+++..+.+.... ...+.-+...+.+++.|.++| |+|||+.++++..+
T Consensus 3 ~~~li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~ 82 (477)
T TIGR01301 3 LRKLLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHH
Confidence 3455556666655555555443333333222222222 223333455677889999999 59999999876443
Q ss_pred HHHHH-HHh-hhhhhHHHH------------HHHHHh-----hhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccch--hh
Q 020422 99 YWLFV-AAN-LFPSWYTMV------------PASLYL-----GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI--GS 157 (326)
Q Consensus 99 ~~~~~-~~~-~~~~~~~l~------------~~r~l~-----G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~r--g~ 157 (326)
..... ... ..++...++ ..+.+. .++.....+...++++|.. |+++| ++
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~----------p~~~~~~~~ 152 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLT----------GGDARRTRI 152 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----------CchhHHHHH
Confidence 33222 222 333322111 122233 3355555555556666655 66654 68
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHH
Q 020422 158 FNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 158 ~~gi~~~~~~~g~~~G~li~~~l 180 (326)
+.+++....++|..+|+.+++..
T Consensus 153 a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 153 ANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988764
No 105
>PRK09669 putative symporter YagG; Provisional
Probab=99.36 E-value=1e-10 Score=111.99 Aligned_cols=232 Identities=9% Similarity=-0.093 Sum_probs=124.4
Q ss_pred HHHHHHhhhhhhHHHHHHH----hchh-hHHHHHhHHHHHHHHH-hhhhh------hHHHHHHHHHhhhhhHHHHhhhhH
Q 020422 67 ILYTSFTCFSLVASLVVRV----LGSK-NALILGTTGYWLFVAA-NLFPS------WYTMVPASLYLGFAASIIWVGEGT 134 (326)
Q Consensus 67 ~~~~~~~~~~l~~g~l~d~----~Grr-~~l~~g~~~~~~~~~~-~~~~~------~~~l~~~r~l~G~g~g~~~~~~~~ 134 (326)
+.-+..++..++.|.++|| +||| +.++.+.+..++.... +..|+ ...+++...+.+++.+.....-.+
T Consensus 53 i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~a 132 (444)
T PRK09669 53 VVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCA 132 (444)
T ss_pred HHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHH
Confidence 3334557888999999999 7774 4555676666655543 33332 223334455556665555555566
Q ss_pred HHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHH-H
Q 020422 135 YLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILM-C 211 (326)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--~~~~~wr~~~f~~~~~~~~l~~il~-~ 211 (326)
..+|+.+ +++||++..++...+..+|..+++.+...+..... ....+|+.. +.+++++..+..++. +
T Consensus 133 l~~~~t~---------~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~-~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 133 MPGAITN---------DPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYA-MMVMGLLGVVLFFCCFF 202 (444)
T ss_pred hHHHhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHH-HHHHHHHHHHHHHHHhC
Confidence 7777652 56789998898888888888888766544332221 112456542 333344333333222 2
Q ss_pred hccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcc-hHHHHH
Q 020422 212 FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GVGGAM 290 (326)
Q Consensus 212 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~g~~~ 290 (326)
..+|+.++++ + ++.+.++ ++++.+||+.++.+....+.......... .+..++.++.++.. ..+...
T Consensus 203 ~~~e~~~~~~-~-------~~~~~~~---~~~~~~~n~~~~~l~~~~~~~~~~~~~~~-~~~~y~~~~~~~~~~~~~~~~ 270 (444)
T PRK09669 203 MTKERYTPEV-D-------NSSSVWK---DLKLLLGNSQWRIMFIFNVVLLTAVVTRG-GATLYYVNYVLLRPDLATLFL 270 (444)
T ss_pred CeEEecCCCC-c-------CCCCHHH---HHHHHhCCchHHHHHHHHHHHHHHHHHHh-hhhheeeeeecCCHHHHHHHH
Confidence 3344322111 0 1112222 33456788887776544333322222211 12222222223322 334444
Q ss_pred HHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 291 AVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 291 ~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
....+...++..+.++++|| ||+.+..+.+
T Consensus 271 ~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~ 302 (444)
T PRK09669 271 VTGMIAGLFGALLSERLLGKFDRVRAFKWTIV 302 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 55567777888899999999 5555544443
No 106
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.34 E-value=9.6e-11 Score=110.25 Aligned_cols=137 Identities=15% Similarity=0.103 Sum_probs=100.2
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
+...++..++.++.+++.||+|||+.+..+.++.++..... ..++.+.++...++.|++.+..++.......+..
T Consensus 256 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~---- 331 (399)
T PRK05122 256 TLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRV---- 331 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhC----
Confidence 34445556778899999999999999988877666554443 4567777777889999999988877666665554
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|+++||++.|++.....+|..+++.+.+.+... .+|+. .|.+..++.+++.++..+++++++
T Consensus 332 ------~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 332 ------PPQNRGAALGAYSVFLDLSLGITGPLAGLVASW-----FGYPS-IFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCHHH-HHHHHHHHHHHHHHHHHHhccccc
Confidence 789999999999999999999988887776543 35665 355555556666655555655433
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.33 E-value=3.3e-10 Score=109.37 Aligned_cols=234 Identities=10% Similarity=0.052 Sum_probs=122.1
Q ss_pred HHHhhhhhhHHHHHH----Hhch-hhHHHHHhHHHHHHHHHh-hhhh------hHHHHHHHHHhhhhhHHHHhhhhHHHH
Q 020422 70 TSFTCFSLVASLVVR----VLGS-KNALILGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYLT 137 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d----~~Gr-r~~l~~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~l~ 137 (326)
+.-++..++.|.++| |+|| |+.++++.+..++..... ..|+ +..+++..++.+++.....+.-.+...
T Consensus 53 i~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~ 132 (473)
T PRK10429 53 IWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVP 132 (473)
T ss_pred HHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhH
Confidence 344777889999999 6698 555566776666654433 3231 122334455667777776666677777
Q ss_pred HHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHH-Hhcc
Q 020422 138 AAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILM-CFLR 214 (326)
Q Consensus 138 ~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--~~~~~wr~~~f~~~~~~~~l~~il~-~~l~ 214 (326)
|..+ +++||.+..++-....++|..+++.+...+..... +...+|+. ...+..++..+..++. +..|
T Consensus 133 ~lt~---------~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~-~~~i~~~~~~~~~~~~~~~~~ 202 (473)
T PRK10429 133 TLTL---------DKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQM-FTLVLIAFFIVSTIITLRNVH 202 (473)
T ss_pred HhCC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHH-HHHHHHHHHHHHHHHHHcCce
Confidence 7762 57899998887666667776665544333222111 11123443 1222233323322222 2355
Q ss_pred CCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccC-cchHHHHHHHH
Q 020422 215 KEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VSGVGGAMAVY 293 (326)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~ 293 (326)
|+...++++. +++++.+.++.++ ..++|+.++.++...+......... ..+.+++..+..+ .+..+......
T Consensus 203 e~~~~~~~~~---~~~~~~~~~~~~~---~~~~n~~~~~ll~~~~~~~~~~~~~-~~~~~y~~~y~~~~~~~~~~~~~~~ 275 (473)
T PRK10429 203 EVYSSDNQVS---AEGSHLTLKDIVA---LIYKNDQLSCLLGMALAYNIASNII-NGFAIYYFTYVIGDADLFPYYLSYA 275 (473)
T ss_pred ecCCcccccc---ccccCCCHHHHHH---HHhcCHHHHHHHHHHHHHHHHHHHH-hhheeeEEEEECCCHHHHHHHHHHH
Confidence 5422111010 0011223444332 3457777766544433332222221 1222333332222 23455666666
Q ss_pred HHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 294 GAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 294 gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
+++..++.++.++++|| ||+.++.+.+
T Consensus 276 ~i~~ii~~~~~~~l~~r~gkk~~~~~~~~ 304 (473)
T PRK10429 276 GAANLVTLILFPRLVKSLSRRILWAGASI 304 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 78888999999999999 5555554443
No 108
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.33 E-value=7.3e-11 Score=118.68 Aligned_cols=132 Identities=11% Similarity=0.017 Sum_probs=104.4
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
++..++++++++++||+|||++++.+.++.++..+.. +.++...+++.+++.|+..++.|+....+++|++
T Consensus 606 l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~-------- 677 (742)
T TIGR01299 606 LAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY-------- 677 (742)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------
Confidence 4446677899999999999999999988887766553 5666666777888999999999999889999987
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|.++||+++|+......+|.++||.+++.+... +...+|.+++++.+++.++.+++||+..
T Consensus 678 --Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-------~~~~pf~i~a~~lll~~ll~~~LPET~~ 738 (742)
T TIGR01299 678 --PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-------TKAAPILFASAALACGGLLALKLPDTRG 738 (742)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 889999999999999999999999998766532 1233455566666666666777887543
No 109
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.33 E-value=7.2e-11 Score=93.25 Aligned_cols=124 Identities=17% Similarity=0.151 Sum_probs=96.9
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCC
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~ 149 (326)
+..+++++.|++.||+|||+.+..+.....+..... ..++.+.+...+++.|++.+..++....++.|..
T Consensus 10 ~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------- 80 (141)
T TIGR00880 10 GQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY--------- 80 (141)
T ss_pred HHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC---------
Confidence 445667889999999999999998887766655543 5677888888999999999999888888888886
Q ss_pred CcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 020422 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (326)
Q Consensus 150 ~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~ 210 (326)
|+++|++..++......+|..+|+.+.+.+.+. .+|+.. |.+......++.+..
T Consensus 81 -~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 81 -PPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-----LGWRAP-FLFLAILALAAFILL 134 (141)
T ss_pred -ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----cchHHH-HHHHHHHHHHHHHHH
Confidence 788999999999999999999999998877543 367663 444455545444433
No 110
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.27 E-value=8.5e-10 Score=103.86 Aligned_cols=129 Identities=12% Similarity=-0.004 Sum_probs=92.3
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
....++.++.|+++||+|||+.+..+.+...+..... ..++++.++..+++.+++.|...+....+..|..
T Consensus 263 ~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~-------- 334 (393)
T PRK15011 263 GLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLM-------- 334 (393)
T ss_pred HHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 4445567899999999999998887665444333222 3556666667888888888877666666666663
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
| ++||++.+++....++|..+|+.+++.+... .+|+. .|.+..++.+++.+..+++||
T Consensus 335 --p-~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~-----~g~~~-~~~~~~~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 335 --P-GQAGSATTLYTNTSRVGWIIAGSLAGIVAEI-----WNYHA-VFWFALVMIIATLFCLLRIKD 392 (393)
T ss_pred --C-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhhHH-HHHHHHHHHHHHHHHHHhhcC
Confidence 4 5799999999999999999999999887653 35765 344455555666666666665
No 111
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.25 E-value=4.8e-10 Score=102.32 Aligned_cols=194 Identities=12% Similarity=0.077 Sum_probs=122.1
Q ss_pred hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCC
Q 020422 108 FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG 187 (326)
Q Consensus 108 ~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~ 187 (326)
..++..++++-++.|.|.+...++.+.|+++.. ++|++++.+++....+.+|..+||+++..+......+
T Consensus 7 ~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~----------~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~ 76 (310)
T TIGR01272 7 QRYYVLFLGALFVLASGLTILQVAANPYVSILG----------PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGD 76 (310)
T ss_pred hhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHC----------CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcc
Confidence 357888888999999999999999999999986 7788999999999999999999999987765321100
Q ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHH-H
Q 020422 188 -----------STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI-I 255 (326)
Q Consensus 188 -----------~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ 255 (326)
..+|+. +|.+.+++..+..+++.+.+.|+.+++++ ++...++. . +..+.+++|.+++. .
T Consensus 77 ~~~~~~~~~~~~~~~~~-~yl~ia~~~~~~~i~~~~~~~p~~~~~~~-~~~~~~~~-~------~~~~~~~~~~~~l~~~ 147 (310)
T TIGR01272 77 LSMQVATANAEAAKVHT-PYLLLAGALAVLAIIFAFLPLPELQEADV-ARVSSGDT-T------QKTSAFQFTHLVLGAL 147 (310)
T ss_pred hhhhhhhhhHHHHHHHH-HHHHHHHHHHHHHHHHHHccCCCCCcccc-cccccccc-c------chhhHHhhHHHHHHHH
Confidence 124655 45544444333333344443322211111 10000000 0 00134456666654 3
Q ss_pred HHHHHhhHHHHHhhhcccccccc---cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 256 PLFAYSGLQQAFVWAEFTKEIVT---PALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 256 ~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
..+++.|.+.+.. ++++.++.+ .+++.++.+.....+..+.++|++++++++|| +|+++..+.++
T Consensus 148 ~~f~yvg~e~~~~-~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l 217 (310)
T TIGR01272 148 GIFVYVGAEVSAG-SFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFL 217 (310)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 4456677776542 233222221 24566788888999999999999999999999 44444444433
No 112
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.25 E-value=2.3e-09 Score=100.25 Aligned_cols=277 Identities=12% Similarity=0.083 Sum_probs=136.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcC-CCCchhHHHHHHHHHH----hhhhhhHHHHHHHhchhhHHHHHhHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISLGILYTSF----TCFSLVASLVVRVLGSKNALILGTTGY 99 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~-~~~~g~~~~~~~~~~~----~~~~l~~g~l~d~~Grr~~l~~g~~~~ 99 (326)
++.++.+.+++.++++|..+......-+.... ..+++....++.+.+. .+.+++.|.++||+|.|+-++....+.
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 45578888999888887777655433333222 2344444455555544 345677889999999777766544333
Q ss_pred HHHHHH----hhhhhh-HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHH
Q 020422 100 WLFVAA----NLFPSW-YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (326)
Q Consensus 100 ~~~~~~----~~~~~~-~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~ 174 (326)
.+.... .+.|-. ....+.-++.|+..+..+.+.........+|.+...+ .|--|.|. ..++|.+++.
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~--feYG~~R~------wGSig~ai~s 155 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNG--FEYGRARM------WGSIGFAIAS 155 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHS--S-HHHHHH------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhc--CCcchHHH------HhhHHHHHHH
Confidence 222211 122211 0112233444555444444433333333333332222 22233343 3477788888
Q ss_pred HHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC-ccccccccccccchhhchHHHHHHHHHHhhhcchhHH
Q 020422 175 LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE-EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL 253 (326)
Q Consensus 175 li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (326)
.+++.+... +. ...|++..+.+++..++.++.+.+ +++.+.++.+ ..++.+ -..++..+.+|+|++|.
T Consensus 156 ~~~G~L~~i------~p-~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~l~k~~~fw~ 224 (412)
T PF01306_consen 156 LLAGILFNI------NP-NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADAL--GAKKDK--VSLKDVLSLFKMRNFWF 224 (412)
T ss_dssp HHHHHHHHH------HH-HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS--SS--------HHHHHHHTTSHHHHH
T ss_pred HHhheeeee------Cc-cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc--ccCCCC--CcHHHHHHHhcchhHHH
Confidence 777776532 11 223444444444333333444322 1111111000 011111 12456678899999998
Q ss_pred HHHHHHHh-hHHHHH--hhhcccc-cccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh---hhhHHhHHHH
Q 020422 254 IIPLFAYS-GLQQAF--VWAEFTK-EIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV---HSLLVGLPLV 320 (326)
Q Consensus 254 l~~~~~~~-g~~~~~--~~~~~~~-~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr---R~~~~~~g~~ 320 (326)
+....... .....+ ....|.. .+.+.+.+.+..|+....--+.+++.-.+..++.+| |+.+++.|.+
T Consensus 225 ~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i 298 (412)
T PF01306_consen 225 FVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVI 298 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHH
Confidence 65543222 111222 1112222 222334455567888888888888888999999999 6666665554
No 113
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.24 E-value=4e-10 Score=107.09 Aligned_cols=138 Identities=15% Similarity=0.232 Sum_probs=101.1
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h-hh---hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-FP---SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~-~~---~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
+.-.++.++.|++.||+|||+++..+.++.++..... . .+ +++.+++.+++.|++.+...+....++++..
T Consensus 262 i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~---- 337 (418)
T TIGR00889 262 FSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEV---- 337 (418)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 3445667889999999999999999988776654332 2 22 2456677899999999988888888888886
Q ss_pred hhcCCCcccchhhHHHHHH-HHHHHhHHHHHHHHHHHhcCCC-CCCCCchhHHHHHHHHHHHHHH-HHHHhccCCcc
Q 020422 145 SNHKLHEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEED 218 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~-~~~~~g~~~G~li~~~l~~~~~-~~~~~wr~~~f~~~~~~~~l~~-il~~~l~~~~~ 218 (326)
|+++||+.+|+.+ ....+|.++||++++.+.+..+ ....||+. .|.+.+++.+++. +..++++|+..
T Consensus 338 ------p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~-~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 338 ------PVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQT-MWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred ------CHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHH-HHHHHHHHHHHHHHHHHHHhCCccc
Confidence 8899999999997 5678999999999988876432 11146876 3555555555444 44567777644
No 114
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.24 E-value=5.2e-09 Score=100.79 Aligned_cols=133 Identities=6% Similarity=-0.066 Sum_probs=89.5
Q ss_pred HHHHHHHHhhhhhhHHHHHHHh-chhhHHHHHhHHHHHHHHHh-hhh-hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 65 LGILYTSFTCFSLVASLVVRVL-GSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~-Grr~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
.+.......++++++|+++||+ |||+++++|.++.++..... ..+ +...++.+-.+.++|.|...+...++++|.++
T Consensus 51 ~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp 130 (493)
T PRK15462 51 FSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYE 130 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCC
Confidence 3444445567788999999999 99999999998876655432 222 22223333345556677766777788888862
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
+ ++++|++++++++.+.++|..++|.+.+.+.+. .+|+.. |.+.++..+++.+.++
T Consensus 131 ~--------~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~-----~Gw~~~-F~iaaigm~l~li~~~ 186 (493)
T PRK15462 131 P--------TDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE-----YSWAMG-FGLAAVGMIAGLVIFL 186 (493)
T ss_pred C--------CCccccceehHHHHHHHHHHHHHHHHHHHHHhh-----hChHHH-HHHHHHHHHHHHHHHH
Confidence 1 223799999999999999999999999888653 478874 4443332334444433
No 115
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.23 E-value=8.1e-10 Score=104.12 Aligned_cols=135 Identities=16% Similarity=0.028 Sum_probs=92.8
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+...++..++.++.|++.||+|||+.+..+.+..++.... ...++.+.++...++.|++.+...+...++..+..
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 337 (406)
T PRK11551 261 QIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFY--- 337 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc---
Confidence 34444556777889999999999999988766554443333 24556555666677888887776676667777765
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
|+++||+..|+......+|..+|+.+.+.+.+.. .+|.. .+.....+.+++.++.+.+.
T Consensus 338 -------p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 338 -------PTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALG----RSTVG-VIGASIPVILVAALAALLLV 396 (406)
T ss_pred -------chhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccC----CchHH-HHHHHHHHHHHHHHHHHHHh
Confidence 8899999999999999999999999988876532 13333 34444444444444444443
No 116
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.23 E-value=8.4e-11 Score=112.00 Aligned_cols=234 Identities=9% Similarity=0.024 Sum_probs=133.2
Q ss_pred HHhhhhhhHHHHHH----HhchhhHHH-HHhHHHHHHHHHhh-h-h-hh------HHHHHHHHHhhhhhHHHHhhhhHHH
Q 020422 71 SFTCFSLVASLVVR----VLGSKNALI-LGTTGYWLFVAANL-F-P-SW------YTMVPASLYLGFAASIIWVGEGTYL 136 (326)
Q Consensus 71 ~~~~~~l~~g~l~d----~~Grr~~l~-~g~~~~~~~~~~~~-~-~-~~------~~l~~~r~l~G~g~g~~~~~~~~~l 136 (326)
.-++..++.|.++| |+|||+..+ +|.+..++.....+ . | ++ ..+.+..++..++.........++.
T Consensus 49 ~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~ 128 (428)
T PF13347_consen 49 WDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALI 128 (428)
T ss_pred hhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcC
Confidence 34667788999999 899777665 46666666554433 3 3 11 1224455566777777666666677
Q ss_pred HHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCC--CCchhHHHHHHHHHHHHHHHH-HHhc
Q 020422 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS--TSGTTLLFIVFLGVITLGTIL-MCFL 213 (326)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~--~~wr~~~f~~~~~~~~l~~il-~~~l 213 (326)
.|..+ +++||.+..+.-..+..+|..+...+...+......+. .+|+.. ..+.+++..+..++ .+..
T Consensus 129 ~~lt~---------~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~-~~v~~iv~~v~~~i~~~~~ 198 (428)
T PF13347_consen 129 PELTP---------DPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWM-ALVLAIVGLVFFLITFFFV 198 (428)
T ss_pred ccccc---------cHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHH-HHHHHHHHHHHhhhhhhee
Confidence 77652 46789999988777777777655555544443332211 257663 33344444443333 3445
Q ss_pred cCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCc-chHHHHHHH
Q 020422 214 RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-SGVGGAMAV 292 (326)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 292 (326)
||++++.+++ +++.+.++. .++.++||.++.+....++..+......+ +.+++.++.++. +..+.....
T Consensus 199 ke~~~~~~~~------~~~~~~~~~---~~~~~~nr~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~vl~~~~~~~~~~~~ 268 (428)
T PF13347_consen 199 KERSVEVTEQ------EKKISLRDS---LRSLFRNRPFRILLLAFFLQWLAFALMNT-FLPYYFTYVLGNEGLISIFMLI 268 (428)
T ss_pred eecccccccc------ccccccccc---hhhhcccchHHHHHHHHHHHHhhhhhhhh-HHHHHHHHHhcCchhhHHHHHH
Confidence 6622111111 112233332 33566788877665554444333222221 222232222332 345666677
Q ss_pred HHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhhc
Q 020422 293 YGAFDAISLLGFATFFSV--HSLLVGLPLVFHLS 324 (326)
Q Consensus 293 ~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~~ 324 (326)
..++..++.++.++++|| ||+.+..+.++.++
T Consensus 269 ~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~ 302 (428)
T PF13347_consen 269 FFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAAL 302 (428)
T ss_pred HHHHHHHHHHHHHHHHHHccceeehhhhHHHHHH
Confidence 788889999999999999 67777776665543
No 117
>PRK12382 putative transporter; Provisional
Probab=99.21 E-value=1e-09 Score=103.05 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=95.3
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
.+..+++++.|++.||+|||+.+..+..+.++..... ..++.+.++...++.|++.+..++...+.+.+..
T Consensus 260 ~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-------- 331 (392)
T PRK12382 260 GAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRV-------- 331 (392)
T ss_pred HHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc--------
Confidence 3456677899999999999999988877665554443 4567766777889999999987777666666664
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
|+++||+..|+++....+|..+|+.+.+.+.+. .+|+. .|....++.+++.++.+
T Consensus 332 --~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-----~g~~~-~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 332 --PSQVRGTALGGYAAFQDIAYGVSGPLAGMLATS-----FGYPS-VFLAGAISAVLGIIVTI 386 (392)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCchH-HHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999998887653 36766 35555555555555443
No 118
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.18 E-value=1.6e-08 Score=95.41 Aligned_cols=267 Identities=18% Similarity=0.066 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHH----HHHHHHHhhhhhhHHHHHHHhc-hhhHHHHHhHHHHHHHHH-h
Q 020422 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTISL----GILYTSFTCFSLVASLVVRVLG-SKNALILGTTGYWLFVAA-N 106 (326)
Q Consensus 33 l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~----~~~~~~~~~~~l~~g~l~d~~G-rr~~l~~g~~~~~~~~~~-~ 106 (326)
++.-+++.|..+.......+..-++.+.+.... ++......+++++.|.++||++ +|+.+.+..++.++.... .
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 444455555554443322222222333333333 3334444566788899999986 566665555444332222 2
Q ss_pred hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHH-HHHHhcCCC
Q 020422 107 LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI-TLAVLKDDK 185 (326)
Q Consensus 107 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li-~~~l~~~~~ 185 (326)
..++++.++..-++..+...+..+-..++..++. +++++..|-.-...++|.+++.+. ...+....+
T Consensus 87 ~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~------------~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~ 154 (400)
T PF03825_consen 87 FSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYL------------GDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLG 154 (400)
T ss_pred HhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHc------------ccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhc
Confidence 3456665555555555555544443333333332 122222333333346666666443 222222111
Q ss_pred CCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHH
Q 020422 186 GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ 265 (326)
Q Consensus 186 ~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~ 265 (326)
.+.....+.+..+...+.....+.+|+.+++++.+.+ .++ ...++..+.+|||+++......+..+...
T Consensus 155 ---~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~~~~~~----~~~----~~~~~~~~llk~~~~~~Fll~~~l~~~~~ 223 (400)
T PF03825_consen 155 ---ISGTSLIFYIAAILSLLLAGFALFLPKTPPKRSAKES----VKK----LLGLDALKLLKNPRFLVFLLAAFLIGISH 223 (400)
T ss_pred ---cccccHHHHHHHHHHHHHHHHHHhCCCCccccccCCC----ccc----ccchHHHHHhcCccHHHHHHHHHHHHHHH
Confidence 1111112333333333333334567776532221110 011 11123457889999887665555556555
Q ss_pred HHhhhcccccccccc-cCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 266 AFVWAEFTKEIVTPA-LGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 266 ~~~~~~~~~~~~~~~-~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
..+++.+..++.+.+ ...+..+.......++++..-.+.+++..| .+.+++.+.+..
T Consensus 224 ~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~ 283 (400)
T PF03825_consen 224 AAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAY 283 (400)
T ss_pred HHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 554433333332212 223456666666667777777888888888 456666666554
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.17 E-value=3.3e-09 Score=102.90 Aligned_cols=138 Identities=10% Similarity=0.025 Sum_probs=90.7
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH---h-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA---N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~---~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
....++..+++++.|+++||+|||+++..+.++..+.... . ..++...+++++++.|++.+..+.....++.+.+
T Consensus 293 ~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~- 371 (490)
T PRK10642 293 IAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMF- 371 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 3344455667788999999999999988877644332221 1 2345666777889988887776666667777765
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|++.||+..|+.+.....+..++|.+.+.+.... .+|+.. ++...+.++++.+..+++||+++
T Consensus 372 ---------p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~----~~~~~~-~~~~~~~~~i~~~~~~~~pes~~ 434 (490)
T PRK10642 372 ---------PTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST----QNLMMP-AYYLMVVAVIGLITGVTMKETAN 434 (490)
T ss_pred ---------CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCchHH-HHHHHHHHHHHHHHHHHhccccC
Confidence 8999999999755545555667776665554321 245543 33344455555555667788765
No 120
>PRK11462 putative transporter; Provisional
Probab=99.16 E-value=1.7e-08 Score=97.26 Aligned_cols=219 Identities=7% Similarity=-0.051 Sum_probs=120.4
Q ss_pred HHhhhhhhHHHHHHH----hchhhHHH-HHhHHHHHHHHHh-hhhh------hHHHHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 71 SFTCFSLVASLVVRV----LGSKNALI-LGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~----~Grr~~l~-~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
.-++..++.|.++|| +|||+..+ +|.+.+++..... ..|+ ..-+.+..++..++....-..-.+..++
T Consensus 57 ~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~ 136 (460)
T PRK11462 57 LDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGV 136 (460)
T ss_pred HHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 347888999999996 68876655 5666666655543 3332 1223334556677777666666677777
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHH-hccC
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMC-FLRK 215 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--~~~~~wr~~~f~~~~~~~~l~~il~~-~l~~ 215 (326)
.++ +++||++..++...+.++|..+++.+...+..... +...+|+.. ..++.++.++...+.+ ..+|
T Consensus 137 lt~---------d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~-~~i~~ii~~i~~~i~~~~~kE 206 (460)
T PRK11462 137 ITN---------DPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGG-IAVLSVVAFMMLAFCFFTTKE 206 (460)
T ss_pred hcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHH-HHHHHHHHHHHHHHHHhccee
Confidence 763 67899999999998888888888777544433221 111345542 2233333333332222 2344
Q ss_pred CccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhh--hcccccccccccCc-chHHHHHHH
Q 020422 216 EEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW--AEFTKEIVTPALGV-SGVGGAMAV 292 (326)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~-~~~g~~~~~ 292 (326)
+.+++ + ++.+.++.+ ...++|+.++.+....+.......... ..|...+ ..+. +..+..+..
T Consensus 207 ~~~~~-~--------~~~~~~~~l---~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y---~~g~~~~~~~~l~~ 271 (460)
T PRK11462 207 RVEAP-P--------TTTSMREDL---RDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTW---ILGTPEVFVAFLTT 271 (460)
T ss_pred ccCCC-c--------cCCCHHHHH---HHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhh---hcCChHHHHHHHHH
Confidence 32211 1 111233333 345667776655433222222111111 1122111 1222 234456677
Q ss_pred HHHHHHHHHHHhhhhhhh--hhhH
Q 020422 293 YGAFDAISLLGFATFFSV--HSLL 314 (326)
Q Consensus 293 ~gi~~~~g~~~~G~l~Dr--R~~~ 314 (326)
+++++.++..++++++|| ||..
T Consensus 272 ~~i~~iig~~l~~~l~~r~gkk~~ 295 (460)
T PRK11462 272 YCVGNLIGSALAKPLTDWKCKVTI 295 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhChHHH
Confidence 788889999999999999 4444
No 121
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.16 E-value=5.4e-09 Score=97.11 Aligned_cols=127 Identities=9% Similarity=0.070 Sum_probs=92.1
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCC
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
..++.++.|++.||+|||+++..+.++..+..... ..++.+.++..+++.|++.+..++....+..+..
T Consensus 248 ~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~---------- 317 (375)
T TIGR00899 248 EIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLM---------- 317 (375)
T ss_pred HHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------
Confidence 34456788999999999999888766544433332 4567777777889999999888777667776663
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
|++++++.+++....++|..+|+.+.+.+.+. .+|+. .|...+++.+++.++..+++|
T Consensus 318 -~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~-----~g~~~-~~~~~~~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 318 -PGRAGAATTLYTNTGRVGWIIAGSVGGILAER-----WSYHA-VYWFAIVMLIVALFCLLLIKD 375 (375)
T ss_pred -cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccchh-HHHHHHHHHHHHHHHHheecC
Confidence 45678999999999999999999998877653 35665 355555556666655555543
No 122
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.15 E-value=4.8e-09 Score=98.40 Aligned_cols=124 Identities=6% Similarity=-0.006 Sum_probs=94.8
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCc
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHE 151 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~ 151 (326)
.++.++.+++.||+|+|+.+.++.++.++..... +.++++.+++..++.|+..+..+++...|+.+. |
T Consensus 254 i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-----------~ 322 (382)
T TIGR00902 254 IIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-----------P 322 (382)
T ss_pred HHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------C
Confidence 3445677899999999999999988877655544 678888888899999999999999988777754 6
Q ss_pred ccchhhHHHHHH-HHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 152 GTVIGSFNGEFW-GMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 152 ~~~rg~~~gi~~-~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
+++|++.++++. ....+|..+|+.+++.+.+.. ++. .|...+++++++.++....+
T Consensus 323 ~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~-----g~~--~~~~~~~~~~~~~~~~~~~~ 379 (382)
T TIGR00902 323 GSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL-----GAG--TFVFMAIIAAAAFFLIPKKL 379 (382)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cHH--HHHHHHHHHHHHHHHHHhcc
Confidence 778899999986 467789999999999987643 332 35566666666655544433
No 123
>PRK09848 glucuronide transporter; Provisional
Probab=99.10 E-value=3e-08 Score=94.98 Aligned_cols=227 Identities=12% Similarity=-0.024 Sum_probs=110.2
Q ss_pred HHHHHHHhhhhhhHHHHHHHh----chhhHH-HHHhHHHHHHHHH-hhhh-----h--hHHHHHHHHHhhhhhHHHHhhh
Q 020422 66 GILYTSFTCFSLVASLVVRVL----GSKNAL-ILGTTGYWLFVAA-NLFP-----S--WYTMVPASLYLGFAASIIWVGE 132 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~----Grr~~l-~~g~~~~~~~~~~-~~~~-----~--~~~l~~~r~l~G~g~g~~~~~~ 132 (326)
+..-+..++..++.|.++||. |||+.. +.+.+...+.... +..+ + ....+..-.+.+++.+...++.
T Consensus 51 ~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (448)
T PRK09848 51 LLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPY 130 (448)
T ss_pred HHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccH
Confidence 334455678889999999997 666655 4555444333222 2111 1 1122334467788888877766
Q ss_pred hHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHH-----HhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA-----SHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~-----~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
.+...+..+ +++||.+..++-..+.+ .+..++|+++....... ..+|.. + ..++++++.
T Consensus 131 ~al~~~~~~---------~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~---~~~~~~--~--~~~~~v~~~ 194 (448)
T PRK09848 131 GSLATAMTQ---------QPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEM---VSVYHF--W--TIVLAIAGM 194 (448)
T ss_pred hhhhhhhcC---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCch---hhhHHH--H--HHHHHHHHH
Confidence 666666542 55678887665543333 33444454443211000 011111 1 122222332
Q ss_pred HHH----HhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCc
Q 020422 208 ILM----CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV 283 (326)
Q Consensus 208 il~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 283 (326)
++. ...||+.++++ ++.+.++. .++.+|||.++......+.......... ...+.+..+.++.
T Consensus 195 ~~~~~~~~~~~e~~~~~~---------~~~~~~~~---~~~l~~n~~f~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~ 261 (448)
T PRK09848 195 VLYFICFKSTRENVVRIV---------AQPSLKIS---LQTLKRNRPLFMLCIGALCVLISTFAVS-ASSLFYVRYVLND 261 (448)
T ss_pred HHHHHHHcCcEeccCCCc---------cCCCHHHH---HHHHhCCchHHHHHHHHHHHHHHHHHHh-hhheeeEeeecCC
Confidence 222 22344322111 11122222 3356788888775544333222211111 2233333333333
Q ss_pred c--hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 284 S--GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 284 ~--~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
+ ..++......++..++..+.++++|| +|+.+..|.++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~ 303 (448)
T PRK09848 262 TGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALL 303 (448)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 2 23333333356677889999999999 56666666544
No 124
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.09 E-value=3e-09 Score=98.34 Aligned_cols=124 Identities=12% Similarity=-0.051 Sum_probs=88.4
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhh--hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS--WYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~--~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
+.......+++++.|++.||+|||+.+..+.++.++..... ..++ ...++....+.|++.+..++....++.|..
T Consensus 247 ~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~-- 324 (377)
T TIGR00890 247 SISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIF-- 324 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHh--
Confidence 34444556778899999999999999988877666554433 3332 223345567888888877766666777775
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL 205 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l 205 (326)
|+++||++.|++.....+|..+|+.+.+.+.+. .+|+. .|.+..++.++
T Consensus 325 --------~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~-----~g~~~-~f~~~~~~~~~ 373 (377)
T TIGR00890 325 --------GPANSAANYGFLYTAKAVAGIFGGLIASHALTE-----IGFEY-TFIVTGAFALT 373 (377)
T ss_pred --------hhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhh-----hchhh-HHHHHHHHHHH
Confidence 788999999999999999999999998877643 35765 34444443333
No 125
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.09 E-value=6.6e-09 Score=94.87 Aligned_cols=130 Identities=20% Similarity=0.198 Sum_probs=101.1
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhh-HHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKN-ALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~-~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
+.......++.++.+++.||+|||+ .+..+.++..+..... ..++++.++....+.|++.+..++...+++.+..
T Consensus 218 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 294 (352)
T cd06174 218 SLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELA--- 294 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhc---
Confidence 3344455667788899999999999 8888887776665554 5666777778899999999999999888888886
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
|+++|++.+|+.....+.|..+++.+.+.+.+. .+|+. .+.+..++.+++.++.+
T Consensus 295 -------~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~-----~~~~~-~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 295 -------PPEARGTASGLFNTFGSLGGALGPLLAGLLLDT-----GGYGG-VFLILAALALLAALLLL 349 (352)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcch-HHHHHHHHHHHHHHHhe
Confidence 779999999999999999999999998887643 35665 35555555555554443
No 126
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.09 E-value=4.1e-09 Score=99.20 Aligned_cols=125 Identities=14% Similarity=0.084 Sum_probs=94.5
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCC
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
..++.+..|++.||+|||+.+..+..+..+..+.. ..++.+.+++.+++.|++.+...+...+++.+..
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---------- 340 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNS---------- 340 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhC----------
Confidence 34556678899999999999998877665544433 4566777778899999999998887777666654
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~ 212 (326)
|+++||+.++++.....+|..+|+.+++.+.+. .+|+. .|.+.+++.+++.++.++
T Consensus 341 ~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----~g~~~-~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 341 SNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----YGFRA-VFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred CcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----cchhH-HHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999998887653 35765 465666666666555443
No 127
>PRK03699 putative transporter; Provisional
Probab=99.09 E-value=9.9e-09 Score=96.63 Aligned_cols=134 Identities=11% Similarity=0.038 Sum_probs=90.2
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+.......++.+..+++.||+|||+.+.....+..+..... ..++...+.....+.|++.+..++...++..+..
T Consensus 247 ~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--- 323 (394)
T PRK03699 247 VSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT--- 323 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc---
Confidence 455556678889999999999999999887665544433332 3455555555678889888877777666555542
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
++++++..|.......+|..+||.+.+.+.+. .+++.. +++..++.+++.++..++++
T Consensus 324 --------~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~-----~g~~~~-~~~~~~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 324 --------KVASPKLVNFILTCGTIGTMLTFVVTSPIVAH-----FGLQAA-LLTANGLYAVVFVMCILLGF 381 (394)
T ss_pred --------cCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH-----hCchhh-hhhhHHHHHHHHHHHHHHHH
Confidence 34567778888888889999999998877654 245553 44444444444444444444
No 128
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.07 E-value=1.2e-08 Score=98.14 Aligned_cols=178 Identities=13% Similarity=0.122 Sum_probs=124.2
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcC-CCCchhHH----HHHHHHHHhhhhhhHHHHHHHhchh--hHHHHHhH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSK--NALILGTT 97 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~-~~~~g~~~----~~~~~~~~~~~~l~~g~l~d~~Grr--~~l~~g~~ 97 (326)
++.|++...-++++++-.+...+..+...+.. +.+.+... ..+..++-.+++++.|++.||+|.| +++..+.+
T Consensus 278 ~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 278 RKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLI 357 (477)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHH
Confidence 45678888878877776666665544333322 22222222 2222334467788999999999999 88888887
Q ss_pred HHHHHHHH-hh--------hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHH
Q 020422 98 GYWLFVAA-NL--------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS 168 (326)
Q Consensus 98 ~~~~~~~~-~~--------~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~ 168 (326)
.+.+..+. .+ .++.+.+++..++.|+..|+.++.+-++.++.. |+++.+..+|+|......
T Consensus 358 ~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~Li----------P~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLI----------PPGREAEFFGLYAITGKA 427 (477)
T ss_pred HHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhC----------CCchhhHHHHHHHHHHHH
Confidence 77443332 23 455566677889999999999999999999997 888999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCc
Q 020422 169 HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEE 217 (326)
Q Consensus 169 g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~ 217 (326)
+..+||++-+.+.+..+ +-|.. +....++.+++.++.+.++.++
T Consensus 428 ss~lGPll~g~i~~~tg----~~r~g-~~~l~~lf~~gl~ll~~v~~~~ 471 (477)
T PF11700_consen 428 SSWLGPLLFGLITDATG----SQRYG-FLFLLVLFLIGLILLFFVDVEK 471 (477)
T ss_pred HHHHHHHHHHHHHHHhC----CchhH-HHHHHHHHHHHHHHHhhccchh
Confidence 99999998877766532 23442 4444555556666666666543
No 129
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.04 E-value=9.1e-09 Score=97.66 Aligned_cols=135 Identities=14% Similarity=0.119 Sum_probs=97.3
Q ss_pred HHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 67 ~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
+......++.++.|++.||+|||+.+..+.++.++..... +.++.+.++..+.+.|++.+...+....++.+..
T Consensus 270 ~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~----- 344 (420)
T PRK09528 270 FQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNF----- 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 3334556778899999999999999988888776655443 5678888888899999999887777777777765
Q ss_pred hcCCCcccchhhHHHH-HHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCc
Q 020422 146 NHKLHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEE 217 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi-~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~~ 217 (326)
|++.|+...+. +.....+|.++|+.+.+.+... .||+. .|....++.+++.++. +.+++++
T Consensus 345 -----~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~-----~G~~~-~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 345 -----DVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDS-----IGFQG-TYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred -----CccceeeeeeehHHHHHHHHHHHHHHHHHHHHHh-----hCchH-HHHHHHHHHHHHHHHHHHHhcCCc
Confidence 77778877655 5667789999999998887653 36776 3555555555444443 4445433
No 130
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.01 E-value=2.2e-07 Score=89.51 Aligned_cols=252 Identities=13% Similarity=0.103 Sum_probs=128.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHH-HHHHh--hhhh-hHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAAN--LFPS-WYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~-~~~~~--~~~~-~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
.++..+..++..++.|.++|+-|+||.++......+. .++.. ..|+ ++...+.-++.-++.+....--.+|+.+.+
T Consensus 76 ~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la 155 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLA 155 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc
Confidence 4555566677788999999999988888775554433 33333 2333 332222223333333333334456777776
Q ss_pred HhhhhhcCC----------------CcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCC---CCCchhHHHHHHHH
Q 020422 141 LSHASNHKL----------------HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG---STSGTTLLFIVFLG 201 (326)
Q Consensus 141 ~~~~~~~~~----------------~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~---~~~wr~~~f~~~~~ 201 (326)
+++...++. ..+.+|++.+|.-+....+|..+-.++...+....+.. ..+-|.. +.+.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~-~~~~a~ 234 (477)
T PF11700_consen 156 RPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA-FLIVAL 234 (477)
T ss_pred CCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH-HHHHHH
Confidence 322110000 00011288888888888888877777665554332211 1122332 222222
Q ss_pred H-HHHHHHHHHhccCCcc-ccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHH-HHH-hhHHHHHhh-hcccccc
Q 020422 202 V-ITLGTILMCFLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAY-SGLQQAFVW-AEFTKEI 276 (326)
Q Consensus 202 ~-~~l~~il~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~g~~~~~~~-~~~~~~~ 276 (326)
- .+.+...++++||+++ ++.+... ..-..++++..+.+++..|+|.+...... +++ .|....... +.|....
T Consensus 235 ww~vfsiP~~~~~~~~~~~~~~~~~~---~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~ 311 (477)
T PF11700_consen 235 WWLVFSIPLFLWLPDRPGPRPLPSGS---SYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEV 311 (477)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCcch---hHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 2344555677787654 2111110 01122344433333344455665553332 222 233332211 1222211
Q ss_pred cccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh---h-hhHHhHHHHHh
Q 020422 277 VTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV---H-SLLVGLPLVFH 322 (326)
Q Consensus 277 ~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr---R-~~~~~~g~~~~ 322 (326)
-+++.++.........+.+++|+++.|++.|| | ++++....++.
T Consensus 312 --lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~ 359 (477)
T PF11700_consen 312 --LGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILW 359 (477)
T ss_pred --cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHH
Confidence 24555566777777888999999999999999 3 24555444433
No 131
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.00 E-value=3.2e-08 Score=93.83 Aligned_cols=133 Identities=16% Similarity=0.154 Sum_probs=92.5
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
++..++.++.+++.||.++++.+..+.++.++..+.. ..++++......++.|++.+...+...+++.+..
T Consensus 270 ~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------- 341 (417)
T PRK10489 270 LGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQYTLLQTQT-------- 341 (417)
T ss_pred HHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--------
Confidence 3445667788899999888888887776655544433 5677766667778889888876666666666665
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHH-HHHHHHHHhccCCcc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVI-TLGTILMCFLRKEED 218 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~-~l~~il~~~l~~~~~ 218 (326)
|++.||+.+|++....++|..+|+.+.+.+.+.. +.+.. +.+.+++. +++++....+++.+.
T Consensus 342 --p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~-----g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 342 --PDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM-----TPVAS-ASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred --CHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh-----chhhH-HHHHHHHHHHHHHHHHHhcccccc
Confidence 8888999999999999999999999988887542 34332 33333333 334455556666443
No 132
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.98 E-value=1.7e-07 Score=90.93 Aligned_cols=131 Identities=11% Similarity=0.039 Sum_probs=87.0
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh----h-hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~----~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
.+..++.++.|+++||+|+|+.+.++.++.++..... . .++...+...-.+..+..|...++..++..+..
T Consensus 270 i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~---- 345 (491)
T PRK11010 270 LATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLC---- 345 (491)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----
Confidence 3556778899999999999988877665444333221 1 234444443445545555555555556666665
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
+++.+++..|+.+...++|..+++.+.+.+.+. .||+. .|.+..++++++.++...++++
T Consensus 346 ------~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~-----~G~~~-~f~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 346 ------NKSFSATQFALLSALSAVGRVYVGPVAGWFVEA-----HGWPT-FYLFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred ------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHH-HHHHHHHHHHHHHHHHHHHHhc
Confidence 677889999999988899988877777777653 36765 4666667777777666666654
No 133
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.95 E-value=2.7e-07 Score=87.50 Aligned_cols=281 Identities=11% Similarity=0.031 Sum_probs=146.6
Q ss_pred cccchhHHHHHHHHHHHHHHHHhHHhhhhhhc-CCCCchhHHHHHHHH----HHhhhhhhHHHHHHH----hchhhH-HH
Q 020422 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGTISLGILYT----SFTCFSLVASLVVRV----LGSKNA-LI 93 (326)
Q Consensus 24 ~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~-~~~~~g~~~~~~~~~----~~~~~~l~~g~l~d~----~Grr~~-l~ 93 (326)
|-.+|.-+--+.+-+..-..+...+.....+- +..+.+....+..+. .-++.-++.|.++|| +||++. ++
T Consensus 8 kLs~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL 87 (467)
T COG2211 8 KLSLKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLL 87 (467)
T ss_pred cccHHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHH
Confidence 33444445555554443333333332222222 223444333333333 337778899999885 675554 55
Q ss_pred HHhHHHHHHHHHh-hhhh------hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHH
Q 020422 94 LGTTGYWLFVAAN-LFPS------WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF 166 (326)
Q Consensus 94 ~g~~~~~~~~~~~-~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~ 166 (326)
++.+.+++.+... .+|+ ..-.++...+.+++-...-..-.+..+++.+ +++||.+..++-+.+.
T Consensus 88 ~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~---------d~~ER~~l~s~R~~~~ 158 (467)
T COG2211 88 WGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ---------DPQERASLTSWRMVFA 158 (467)
T ss_pred HHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC---------CHHHHHHHHHHHHHHH
Confidence 6778888777654 4552 2233345678888888776666777777763 6789999999887777
Q ss_pred HHhHHHHHHHHHHHhcCCCCC--CCCchhHHHHHHHHHHHHHHHHH-HhccCCccccccccccccchhhchHHHHHHHHH
Q 020422 167 ASHQFVGNLITLAVLKDDKGG--STSGTTLLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSIT 243 (326)
Q Consensus 167 ~~g~~~G~li~~~l~~~~~~~--~~~wr~~~f~~~~~~~~l~~il~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (326)
+.|..+-..+...+......+ ..+|+.. -.++.+++++..+.. +-.+|+..+..+.+ +..+.++++ .+.
T Consensus 159 ~~g~~l~~~~~~plv~~~g~~~~~~g~~~~-~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~----~~~~~~~~~---~~~ 230 (467)
T COG2211 159 SLGGLLVAVLFPPLVKLFGGGDKALGYQGT-ALVLGVIGVILLLFCFFNVKERVVETQPTK----TGVKLKLKD---SFL 230 (467)
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhhHHHH-HHHHHHHHHHHHHHHHHHhhcccCccccCc----ccccccHHH---HHH
Confidence 777665544443333322211 2345431 122222222222222 23455443221110 001223322 223
Q ss_pred HhhhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCcc--hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 244 TLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 244 ~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
..++|+.++.+....++.......-. ....++.+..++.+ ...+.+.....+..++.++..++.+| +|++...|.
T Consensus 231 ~~~~Nrp~~~~l~~~l~~~~~~~i~~-s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~ 309 (467)
T COG2211 231 LIFKNRPLLLLLLMNLLLFIAFNIRG-SIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGL 309 (467)
T ss_pred HHHccchHHHHHHHHHHHHHHHHHHh-hhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHH
Confidence 46678887776654433333222212 22222333334433 34555666666767778999999999 676666665
Q ss_pred HHh
Q 020422 320 VFH 322 (326)
Q Consensus 320 ~~~ 322 (326)
++.
T Consensus 310 ~~~ 312 (467)
T COG2211 310 LLL 312 (467)
T ss_pred HHH
Confidence 443
No 134
>TIGR00898 2A0119 cation transport protein.
Probab=98.95 E-value=4.1e-08 Score=95.39 Aligned_cols=129 Identities=14% Similarity=0.071 Sum_probs=92.1
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhh--HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSW--YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~--~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
...+.++.+.+.||+|||+++.++.++.++..+.. +.++. ...+..-.+.+++.+..++....+..|.+
T Consensus 368 ~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-------- 439 (505)
T TIGR00898 368 ELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELY-------- 439 (505)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccc--------
Confidence 34566788999999999999999887766655443 33322 33344456667777777777777777776
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|++.|++++|+......+|.+++|.+.+ +... ++ ...+.+++++.+++.++.+++||+..
T Consensus 440 --p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~------~~-~~~~~~~~~~~~~~~~~~~~lpet~~ 499 (505)
T TIGR00898 440 --PTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK------WL-FLPLVLFGGLALLAGILTLFLPETKG 499 (505)
T ss_pred --cHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH------HH-hhHHHHHHHHHHHHHHHHHcCcCCCC
Confidence 8889999999999999999999998876 3221 12 23455666666666666778888654
No 135
>PRK10504 putative transporter; Provisional
Probab=98.95 E-value=4.3e-08 Score=94.40 Aligned_cols=100 Identities=17% Similarity=0.121 Sum_probs=75.2
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h---hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
.++.++.+++.||+|||+++..+..+.++..... . .++...+...-++.|++.+..++....+..+..
T Consensus 311 ~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------- 382 (471)
T PRK10504 311 MGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDL-------- 382 (471)
T ss_pred HHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------
Confidence 3445778999999999999998887666554432 2 123333344567788888888887777777665
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
|++++|.++|++.....+|..+|+.+.+.+..
T Consensus 383 --~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~ 414 (471)
T PRK10504 383 --PDNLASSGNSLLSMIMQLSMSIGVTIAGLLLG 414 (471)
T ss_pred --CHHhccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999999999999999999988877654
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.95 E-value=5.4e-08 Score=91.90 Aligned_cols=131 Identities=15% Similarity=0.168 Sum_probs=86.9
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHH-HHhHHHHHHHHHh-h-----hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALI-LGTTGYWLFVAAN-L-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~-~g~~~~~~~~~~~-~-----~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
+....+..+++++.|+++||+|||+.+. .+.+..++...+. . .++.+.+++..++.|++.+...+. ...+.+
T Consensus 264 ~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~ 342 (402)
T TIGR00897 264 GTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPT 342 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHh
Confidence 3444566788899999999999988764 2333222222211 1 235556666788889888875443 334444
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
. +|++||++.|+++....+|..+||.+.+.+.+. .+|.. .+++.+++.+++.++..+++
T Consensus 343 ~-----------~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~-----~g~~~-~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 343 L-----------APKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGF-----FGAIG-VVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred h-----------CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----cchHH-HHHHHHHHHHHHHHHHHHhc
Confidence 3 556899999999999999999999998877654 35655 35555666666666655543
No 137
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.94 E-value=9.8e-08 Score=89.39 Aligned_cols=123 Identities=17% Similarity=0.123 Sum_probs=85.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
+.......+++++.|++.||+|+|+++..+....++..+... +.. ..+.+..+.|++.+..++...+++.+..
T Consensus 242 ~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~~-~~~~~~~l~g~~~~~~~p~~~~~~~~~~----- 314 (381)
T PRK03633 242 ALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQA-AMAPALFILGAAGFTLYPVAMAWACEKV----- 314 (381)
T ss_pred HHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hhH-HHHHHHHHHHHHHHhHHHHHHHHHHccC-----
Confidence 344455567788899999999999999888776655443332 222 3334677888887777777777666664
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHH
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG 206 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~ 206 (326)
|+++++...+.+....++|..+||.+++.+.+.. +|++ .|.+.+++.++.
T Consensus 315 -----~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~-----g~~~-~f~~~~~~~l~~ 364 (381)
T PRK03633 315 -----EHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNY-----SDNL-LFIMIASVSFIY 364 (381)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----CccH-HHHHHHHHHHHH
Confidence 6677787888888888999999999988886542 4554 344444444443
No 138
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.94 E-value=4.5e-08 Score=94.36 Aligned_cols=174 Identities=13% Similarity=0.019 Sum_probs=99.1
Q ss_pred hHHHHHHHHHHHHHHHHhHHhhhh-----hhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH
Q 020422 29 DVHILSCAFLLIFLAYGAAQNLET-----TVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (326)
Q Consensus 29 ~~~~l~l~~~~~~~~~~~~~~l~~-----~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~ 103 (326)
+++.+.+..++.+..+.......+ ..+.+........+....+..++.++.|+++||+|||+.+..+..+..+..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~ 338 (467)
T PRK09556 259 VIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIF 338 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHH
Confidence 455555555554444433332222 222222222223444555667888999999999999988766544333222
Q ss_pred HH--h-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHH-hHHHHHHHHHH
Q 020422 104 AA--N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITLA 179 (326)
Q Consensus 104 ~~--~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~-g~~~G~li~~~ 179 (326)
.. . ..++...+.+++++.|+...........+..|.. |+++||++.|+.....++ |..+++.+.+.
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~----------p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 339 TLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFV----------PKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhc----------chhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 11 1 2335555556777777654332222233444554 888999999999888776 76888888777
Q ss_pred HhcCCCC-------CCCCchhHHHHHHHHHHHHHHHHHHhc
Q 020422 180 VLKDDKG-------GSTSGTTLLFIVFLGVITLGTILMCFL 213 (326)
Q Consensus 180 l~~~~~~-------~~~~wr~~~f~~~~~~~~l~~il~~~l 213 (326)
+.....+ ...+|+. .|.++.++.+++.+..+++
T Consensus 409 i~~~~~~g~~~~~~~~~~~~~-~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 409 IADPTKNGTPIFGYTLTGWAG-TFAALDIAAIGCICLMAIV 448 (467)
T ss_pred HhcccccccccccccccChHH-HHHHHHHHHHHHHHHHHHH
Confidence 7651000 0246776 3555566666665555444
No 139
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.93 E-value=6.2e-08 Score=87.90 Aligned_cols=136 Identities=11% Similarity=0.074 Sum_probs=98.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
....+..+-+++...|.+.|++|||+.+........++... ...||+..+...|.+.|+|.|+ .|...++-.+.-
T Consensus 119 t~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~l--- 194 (528)
T KOG0253|consen 119 TLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFL--- 194 (528)
T ss_pred HHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhc---
Confidence 34456677888999999999999999998877766665554 4789999999999999999998 454444444543
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|..+|+.-+=++ .....|.++...++.++..+ .|||+..|.. .....+.....+.++|+++
T Consensus 195 -------p~~~r~~~~V~~-~~waig~v~ea~law~vm~~-----~gwr~~l~~~-~~pl~~~a~f~~w~~ESpR 255 (528)
T KOG0253|consen 195 -------PSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSN-----FGWRYLLFTS-STPLMFAARFLVWVYESPR 255 (528)
T ss_pred -------cCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHH-HhHHHHHHHHHhhcccCcc
Confidence 777888765555 67788888888888777654 4899854433 2333344455677888654
No 140
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.93 E-value=2.6e-08 Score=92.05 Aligned_cols=177 Identities=12% Similarity=0.124 Sum_probs=123.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcC-CCCchhHHH----HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNT-EGNLGTISL----GILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~-~~~~g~~~~----~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~ 99 (326)
+..||+...-++.+++.-+...+..+...+.. +.++++..+ .....+-.+++++.|++.||+|.|+++..+.+++
T Consensus 249 ~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~ 328 (438)
T COG2270 249 RGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVIL 328 (438)
T ss_pred hcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHH
Confidence 44558887777777766665555544444433 344444332 2222344677889999999999999999999888
Q ss_pred HHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHH
Q 020422 100 WLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (326)
Q Consensus 100 ~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~ 178 (326)
.+..+. .+......+.....+.|+..|+.+..+-+|.++.. |++|-|+++|+|......++.+||.+.+
T Consensus 329 ~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lv----------p~~k~~~fFglyaltgra~S~~gp~lv~ 398 (438)
T COG2270 329 SIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLV----------PKGKEGRFFGLYALTGRAASFLGPFLVA 398 (438)
T ss_pred HHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhC----------CCccccceeehhhhhhhHHHHHHHHHHH
Confidence 766554 34444444445779999999999999999999997 8889999999999999999999998877
Q ss_pred HHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 179 AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 179 ~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
.+.+..+ +-|.. +....++..++.++.+.+|++
T Consensus 399 v~t~iTg----~~r~g-~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 399 VITQITG----SSRAG-VLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHhc----chhhH-HHHHHHHHHhhHhhEEeecCC
Confidence 7665432 23442 323344444555555666665
No 141
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.92 E-value=1.3e-07 Score=89.06 Aligned_cols=138 Identities=8% Similarity=-0.056 Sum_probs=85.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh--hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~--~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
.++..++..+++++.+++.||+|||+.+..+..+..+..... ..++...+. -.+.|++.+..++.......+..
T Consensus 246 ~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~-- 321 (393)
T PRK09705 246 LALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGGAFPLCLLLALDHS-- 321 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccchHHHHHHHHHhhc--
Confidence 344445557778889999999999999888776555544332 222222222 24567777776665544444433
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCcc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEED 218 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~ 218 (326)
.|+++||+.+|+.+....++..+||.+.+.+....+ ++ ...|.+...+.+.+.+. ..+.||+.+
T Consensus 322 -------~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (393)
T PRK09705 322 -------VQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG----NY-LMDWAFHALCVVGLMIITLRFAPARFP 386 (393)
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----Cc-hHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 246789999999999999999999999888765431 23 22343434444433333 345555443
No 142
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.91 E-value=3.5e-07 Score=84.63 Aligned_cols=228 Identities=13% Similarity=0.043 Sum_probs=128.6
Q ss_pred hhhhhhHHHHHHHhc-----hhhHHHHHhHHH-HHHH--HH----hhhh--------hhH---HHHHHHHHhhhhhHHHH
Q 020422 73 TCFSLVASLVVRVLG-----SKNALILGTTGY-WLFV--AA----NLFP--------SWY---TMVPASLYLGFAASIIW 129 (326)
Q Consensus 73 ~~~~l~~g~l~d~~G-----rr~~l~~g~~~~-~~~~--~~----~~~~--------~~~---~l~~~r~l~G~g~g~~~ 129 (326)
+...+..|..+|+.+ ||...+++.... .... +. .+.. .+. ...++-.+.|+|.+..-
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 556778899999999 998888755432 2211 11 1122 222 22233456677777666
Q ss_pred hhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH--
Q 020422 130 VGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-- 207 (326)
Q Consensus 130 ~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~-- 207 (326)
++-.+.++|.+ |||+|+++.++.|.+.-+|.+++.++.+.+...++ ...+ .-++-...++..
T Consensus 108 T~~lALl~D~~----------~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s-----~~rL-~~v~~~~a~i~~~l 171 (403)
T PF03209_consen 108 TSFLALLADLA----------PEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFS-----PERL-IQVIQGVALIALLL 171 (403)
T ss_pred HHHHHHHHhcC----------CHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccC-----HHHH-HHHHHHHHHHHHHH
Confidence 66566666655 99999999999999999999999988877766542 2221 222222222222
Q ss_pred -HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccc--ccCcc
Q 020422 208 -ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP--ALGVS 284 (326)
Q Consensus 208 -il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~ 284 (326)
++..+=.|++..++.+ .+++++.++++..+ +...+|+.+..+...+ .+....+......+.|..+ +++++
T Consensus 172 ~~ia~wg~E~r~~~~~~---~~~~~~~~f~~a~~---~~~~~~~a~~f~~fl~-l~t~a~~~QD~iLEPygg~Vfgmsv~ 244 (403)
T PF03209_consen 172 NLIALWGQEPRRSRRAA---AAERPRPPFREAWR---QVWASPQARRFFVFLF-LGTLAFFMQDVILEPYGGEVFGMSVG 244 (403)
T ss_pred HHHHHHhcccCCccccc---CCCCCCccHHHHHH---HHHhCCChhHHHHHHH-HHHHHHHhhHHHcCCchhHHcCCCHH
Confidence 2223333433322210 01122335555444 4456666665443322 2222112122223333322 46677
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh---hhhHHhHHHHHhh
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV---HSLLVGLPLVFHL 323 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr---R~~~~~~g~~~~~ 323 (326)
++.......+.+..+|-.+.|++..| .+.....|.++.+
T Consensus 245 eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~ 286 (403)
T PF03209_consen 245 ETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGA 286 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 88888999999999999999988886 2334444554443
No 143
>PRK03545 putative arabinose transporter; Provisional
Probab=98.91 E-value=1.6e-07 Score=88.14 Aligned_cols=126 Identities=13% Similarity=-0.033 Sum_probs=84.4
Q ss_pred HHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHH-H-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-A-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 68 ~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~-~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
......+++++.+++.||+|||+.+.. ..+...... . ...++.+.++.+.++.|++.+...+....++.+.
T Consensus 250 ~~~~~~~g~~~~g~l~dr~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~------ 322 (390)
T PRK03545 250 FGGAGIIGSVLFSRLGNRHPSGFLLIA-IALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKL------ 322 (390)
T ss_pred HHHHHHHHHHHHHHHhhccchhHHHHH-HHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHh------
Confidence 334556677889999999998875443 333222222 2 2345666666778888988766555544555544
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
.|++||+++|++....++|..+|+++++.+.+. .+++. .|.+.+++.+++.+...
T Consensus 323 -----~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~-----~g~~~-~~~~~~~~~~~~~~~~~ 377 (390)
T PRK03545 323 -----APDATDVAMALFSGIFNIGIGAGALLGNQVSLH-----LGLSS-IGYVGAALALAALVWSI 377 (390)
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cChhH-HHHHHHHHHHHHHHHHH
Confidence 346899999999999999999999999888754 35665 35555566666555443
No 144
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.90 E-value=1.9e-07 Score=88.71 Aligned_cols=191 Identities=15% Similarity=0.059 Sum_probs=110.6
Q ss_pred cccCc-cccchhHHHHHHHHHHHHHHHHhHH-hhhhhhc-CCCCchhH----HHHHHHHHHhhhhhhHHHHHHHhch-hh
Q 020422 19 QVLTP-KNYTRDVHILSCAFLLIFLAYGAAQ-NLETTVN-TEGNLGTI----SLGILYTSFTCFSLVASLVVRVLGS-KN 90 (326)
Q Consensus 19 ~~~~~-~~~~~~~~~l~l~~~~~~~~~~~~~-~l~~~l~-~~~~~g~~----~~~~~~~~~~~~~l~~g~l~d~~Gr-r~ 90 (326)
.+++. +..||-+++..+-.++....+.... .+.++++ .|.+.+.. ..+..-++-+++++..|.-..|.+. |+
T Consensus 24 ~~~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~ 103 (488)
T KOG2325|consen 24 SPLDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK 103 (488)
T ss_pred ccccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCccc
Confidence 44433 3455666555555444443333211 2222222 13333332 2444555566677778888888885 77
Q ss_pred HHHHHhHHHHHHHHHh-----hhh-hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHH
Q 020422 91 ALILGTTGYWLFVAAN-----LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWG 164 (326)
Q Consensus 91 ~l~~g~~~~~~~~~~~-----~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~ 164 (326)
.++.|.++..+..+.. ..+ +-+.++++|++.|+|.|... ..-+|+++.+ ..++|-|+++....
T Consensus 104 Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a-~lR~Y~a~~s----------~~~dR~rA~a~~~~ 172 (488)
T KOG2325|consen 104 PLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA-VLRAYIADAS----------TVEDRPRAFAATSG 172 (488)
T ss_pred CHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH-HHHHHHHhcc----------CccchHHHHHHhhh
Confidence 7777777665544432 223 45677789999999988643 3456777765 67889999998888
Q ss_pred HHHHhHHHHHHHHHHHhcCCCCC-----CCCch--hHHHHHHHHHHHHHH-HHHHhccCCcccc
Q 020422 165 MFASHQFVGNLITLAVLKDDKGG-----STSGT--TLLFIVFLGVITLGT-ILMCFLRKEEDKG 220 (326)
Q Consensus 165 ~~~~g~~~G~li~~~l~~~~~~~-----~~~wr--~~~f~~~~~~~~l~~-il~~~l~~~~~~~ 220 (326)
+..+|.++||.+..++..-...+ ...|. +..-++..++.++.. ++.++++|..++.
T Consensus 173 ~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~ 236 (488)
T KOG2325|consen 173 GFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGI 236 (488)
T ss_pred HHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCc
Confidence 88899999988876654322111 01111 122335555555544 3456788866543
No 145
>PRK09952 shikimate transporter; Provisional
Probab=98.89 E-value=1.5e-07 Score=90.10 Aligned_cols=130 Identities=10% Similarity=0.001 Sum_probs=84.3
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h---h-hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhh
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---F-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~---~-~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~ 146 (326)
..++.++.|+++||+|||+++..+.++..+..... . . ++...++...++.|++.+..++....+++|..
T Consensus 299 ~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~------ 372 (438)
T PRK09952 299 SCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMF------ 372 (438)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------
Confidence 34566788999999999999887765443332221 1 1 23344444556678888887777788888886
Q ss_pred cCCCcccchhhHHHHHHHH-HHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 147 HKLHEGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 147 ~~~~~~~~rg~~~gi~~~~-~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
|.+.|+...|+.+.. ..+|..++|.+.+.+.... ..+|+. .+....++.+++.+..+.++|
T Consensus 373 ----p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~---~~~~~~-~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 373 ----GASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYF---GGSWHS-VAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred ----CcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---CCCchH-HHHHHHHHHHHHHHHHHHccc
Confidence 778898888885544 4478888888877775432 124654 343444555566555556665
No 146
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.85 E-value=6.7e-08 Score=89.82 Aligned_cols=109 Identities=16% Similarity=-0.030 Sum_probs=78.5
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH--HHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV--AAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~--~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
.+...+...++.++.|++.||+|||+.+..+..+..+.. ... . .++.+.++...++.|++.+..++...+++.|.
T Consensus 261 ~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 340 (394)
T TIGR00883 261 LMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPEL 340 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHh
Confidence 334445556777889999999999998876554433322 111 2 23555666677888999988888888888888
Q ss_pred hHhhhhhcCCCcccchhhHHHHH-HHHHHHhHHHHHHHHHHHhcC
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEF-WGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~-~~~~~~g~~~G~li~~~l~~~ 183 (326)
. |+++|+++.++. ..+...|..+||.+++.+.+.
T Consensus 341 ~----------p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 341 F----------PTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred C----------CccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 6 888999999984 455667888999988887654
No 147
>TIGR00895 2A0115 benzoate transport.
Probab=98.83 E-value=9.1e-08 Score=89.16 Aligned_cols=105 Identities=11% Similarity=-0.026 Sum_probs=77.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHH-Hh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-AN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~-~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
.+...++..++.++.+++.||+|||+.+.... +.++... .. ..++...++...++.|++.+..++...+++.+..
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-- 367 (398)
T TIGR00895 291 GALFNFGGVIGSIIFGWLADRLGPRVTALLLL-LGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFY-- 367 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchHHHHHHHH-HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Confidence 34444556777889999999999995544333 3322222 22 2445555666778999999988888888888775
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
|+++||++.|+......+|..+||.+.+.+
T Consensus 368 --------~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 368 --------PTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred --------CHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 889999999999999999999999887654
No 148
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.83 E-value=3e-07 Score=85.21 Aligned_cols=127 Identities=11% Similarity=0.028 Sum_probs=76.9
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhH--HHH------HhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNA--LIL------GTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~--l~~------g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l 136 (326)
+...+...++.++.+++.||+|||+. ... +.++.++..... ..++....+..-.+.+.+.+ ..+...+++
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 336 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALI 336 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHH
Confidence 33444556778899999999999961 111 111111111111 12344444333344444444 667777788
Q ss_pred HHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCC-chhHHHHHHHHHHHHHHHH
Q 020422 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTS-GTTLLFIVFLGVITLGTIL 209 (326)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~-wr~~~f~~~~~~~~l~~il 209 (326)
.+.. |+++||++.|+......+|..+|+.+.+.+.... + |+. .|.+..++.+++.+.
T Consensus 337 ~~~~----------~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~-----g~~~~-~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 337 SDNA----------PGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT-----GSFAG-ALMVVAALALIGALS 394 (399)
T ss_pred Hhhc----------ChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC-----CchhH-HHHHHHHHHHHHHHH
Confidence 8876 8899999999999999999999999887775432 3 554 344444444444433
No 149
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.82 E-value=5.7e-07 Score=84.31 Aligned_cols=102 Identities=6% Similarity=0.009 Sum_probs=78.8
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCC
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~ 149 (326)
...+..++.+++.||+|+|+.+..+.++.++.... ...++.+.+++..++.|++.+..++....++.+.
T Consensus 252 ~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~---------- 321 (382)
T PRK11128 252 AEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR---------- 321 (382)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------
Confidence 34455678899999999999999888776664443 3567888778889999999998888777776664
Q ss_pred CcccchhhHHHHHH-HHHHHhHHHHHHHHHHHhcC
Q 020422 150 HEGTVIGSFNGEFW-GMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 150 ~~~~~rg~~~gi~~-~~~~~g~~~G~li~~~l~~~ 183 (326)
+++++++..+++. .....|..+|+.+++.+.+.
T Consensus 322 -~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~ 355 (382)
T PRK11128 322 -PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQH 355 (382)
T ss_pred -CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5566788899876 44567778999999888754
No 150
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.81 E-value=6.7e-10 Score=108.36 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=3.0
Q ss_pred HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCC-C----C
Q 020422 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-K----G 186 (326)
Q Consensus 112 ~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~-~----~ 186 (326)
..++++.++.|+|.+++|+-..+|+.|+. ++++-+...|++++...+|.++|-++++.....+ + .
T Consensus 142 ~~f~~gq~l~GiG~~pl~tLG~tYiDDnv----------~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~ 211 (539)
T PF03137_consen 142 YVFILGQLLIGIGATPLYTLGITYIDDNV----------SKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVP 211 (539)
T ss_dssp ----------SSS-------------------------------------------------------------------
T ss_pred HHHHHHHHHHhccccCCccceeeeecccc----------ccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCcccc
Confidence 56778899999999999999999999998 7788899999999999999999988887665422 1 0
Q ss_pred -----------CCCC-chhHHHHHHHHHHHHHHHHHHhccCCcccc----c-ccc-----ccc--c-chhh-------ch
Q 020422 187 -----------GSTS-GTTLLFIVFLGVITLGTILMCFLRKEEDKG----E-KET-----ADA--S-VNFY-------SY 234 (326)
Q Consensus 187 -----------~~~~-wr~~~f~~~~~~~~l~~il~~~l~~~~~~~----~-~~~-----~~~--~-~~~~-------~~ 234 (326)
.+.| | |+=|++.+.+.++..+.++++|+..++. + ++. ++. . .++. ..
T Consensus 212 ~~~~~i~p~dp~WvGAW-WLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (539)
T PF03137_consen 212 PDGVGITPSDPRWVGAW-WLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKS 290 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCCCCCCCCccHHHHH-HHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhh
Confidence 0112 2 2234444555555545556666633322 0 000 000 0 0000 11
Q ss_pred HHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccccccccc--CcchHHHHHHHHHH-HHHHHHHHhhhhhhh
Q 020422 235 LVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPAL--GVSGVGGAMAVYGA-FDAISLLGFATFFSV 310 (326)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~gi-~~~~g~~~~G~l~Dr 310 (326)
.++..+.+++.++||.+.........-.+...-+. .|.|-+....+ +.+.+.++.....+ ++++|.+++|.+..|
T Consensus 291 ~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~-tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk 368 (539)
T PF03137_consen 291 IKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFA-TFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKK 368 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred hhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEE
Confidence 23333455567788888765544322222222222 34444433333 33344444333222 556889999999998
No 151
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.81 E-value=2.6e-07 Score=81.13 Aligned_cols=183 Identities=13% Similarity=0.118 Sum_probs=111.7
Q ss_pred cCccccchhHHHHHHHHHHHHHHHHhHHhh-----hhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHH
Q 020422 21 LTPKNYTRDVHILSCAFLLIFLAYGAAQNL-----ETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILG 95 (326)
Q Consensus 21 ~~~~~~~~~~~~l~l~~~~~~~~~~~~~~l-----~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g 95 (326)
.+....+-..+++...+++++.+.-+...+ ++.+..+....+...+..|...++.+++.|.++||+|++...+.+
T Consensus 257 tdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~ 336 (459)
T KOG4686|consen 257 TDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVAS 336 (459)
T ss_pred ccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHH
Confidence 344445555666666666665554443333 333333333333346778888888899999999999999998887
Q ss_pred hHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHH
Q 020422 96 TTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNL 175 (326)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~l 175 (326)
..+..+..=..+.-+.+.=+.+-.++|+..+++-.+-.-.++... ||++.|++.|..+...++|.++-++
T Consensus 337 a~~~tl~~H~~l~Ft~lsPy~~m~~lGLsysllAcslWP~va~~v----------pE~qLGTaygf~qsIqNLgla~i~I 406 (459)
T KOG4686|consen 337 ACILTLLGHSGLFFTFLSPYTSMTFLGLSYSLLACSLWPCVASLV----------PEEQLGTAYGFIQSIQNLGLAFIPI 406 (459)
T ss_pred HHHHHHHHhhhHHhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhC----------CHHHhcchHHHHHHHHhhhhhHHhh
Confidence 765443322211111111123446778777653222222233333 8889999999999999999999999
Q ss_pred HHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 176 i~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
+++++..+. +++.|-..+|.+...++++.+.+.+.+.+
T Consensus 407 iag~i~d~~--g~y~~le~ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 407 IAGFIADGD--GSYDNLEAFFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred hhheeecCC--CchhhHHHHHHHHHHHHHHHHHHHhheec
Confidence 998886543 23556665454444445555555555444
No 152
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.78 E-value=1.5e-07 Score=86.69 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=83.1
Q ss_pred HHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhh-hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 68 ~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
..++..++.++.+++.||+|||+.+..+..+.++..... ..+ +.+.+++..++.|++.+...+...+++.+..
T Consensus 256 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----- 330 (365)
T TIGR00900 256 FGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRV----- 330 (365)
T ss_pred HHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 334455667788999999999999888766555444432 344 3667777889999999998888888888876
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
|+++||+..|++.....++..+|+.+.+.+.+
T Consensus 331 -----~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 331 -----PAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred -----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999998877654
No 153
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.77 E-value=7.8e-08 Score=91.65 Aligned_cols=136 Identities=16% Similarity=0.099 Sum_probs=84.2
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhh------hh------hhHHHHHHHHHhhhhhHHH-Hhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL------FP------SWYTMVPASLYLGFAASII-WVG 131 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~------~~------~~~~l~~~r~l~G~g~g~~-~~~ 131 (326)
.........++.++.+++.||+|||+.+..+.++.++...... .+ ++..+... .+.+.+.+.. .+.
T Consensus 325 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 403 (481)
T TIGR00879 325 SIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFI-LLFIAFFAMGWGPV 403 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHH-HHHHHHHHccccCe
Confidence 3444455567788999999999999999888665544332211 11 22222222 2222222222 233
Q ss_pred hhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH-
Q 020422 132 EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM- 210 (326)
Q Consensus 132 ~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~- 210 (326)
...++.|.. |+++|+++.|+......+|.++++.+.+.+... .+|+. .|++.+++++++.++.
T Consensus 404 ~~~~~~~~~----------p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~-----~~~~~-~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 404 PWVIVSEIF----------PLSLRPKGISIAVAANWLANFIVGFLFPTMLES-----IGVGG-VFIFFGGLNVLGLIFVY 467 (481)
T ss_pred ehhhhhccC----------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCccc-eehhHHHHHHHHHHHHh
Confidence 445556664 888999999999999999999999887776543 24554 3555566666555544
Q ss_pred HhccCCc
Q 020422 211 CFLRKEE 217 (326)
Q Consensus 211 ~~l~~~~ 217 (326)
++.||++
T Consensus 468 ~~~~~~~ 474 (481)
T TIGR00879 468 FFLPETK 474 (481)
T ss_pred eecccCC
Confidence 3456544
No 154
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.77 E-value=9.7e-08 Score=91.80 Aligned_cols=126 Identities=9% Similarity=-0.013 Sum_probs=84.3
Q ss_pred HHHHHHHhhhhhhHHHHHHH--hchhhHHHHHh--HHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 66 GILYTSFTCFSLVASLVVRV--LGSKNALILGT--TGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~--~Grr~~l~~g~--~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
++..++..+++++.+.+.|| +++|+...++. +..++..+. ...++++.++..+++.|++.+..++...+.+.+..
T Consensus 283 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~ 362 (455)
T TIGR00892 283 SIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLV 362 (455)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHh
Confidence 33334445556778899997 44454444332 222222222 24567777788899999999998888888888876
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHH
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLG 206 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~ 206 (326)
|++++|+..|++....++|.++||.+++.+.... .+|+.. |.+.+++.+++
T Consensus 363 ----------~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~----g~~~~~-f~~~~~~~li~ 413 (455)
T TIGR00892 363 ----------GAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDAT----KNYKYI-FYASGSIVVSA 413 (455)
T ss_pred ----------hHHHHhhHHhHHHHHHHHHHHccccceeeeehhc----CCcchH-HHHhhHHHHHH
Confidence 7789999999999999999999999987765432 146553 33334433333
No 155
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.76 E-value=6e-07 Score=85.70 Aligned_cols=130 Identities=17% Similarity=0.079 Sum_probs=71.9
Q ss_pred HHHHHHHHhhhhhhHHHHHHHh--ch-hhHHHHHhHHHHHHHHH-hh--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVL--GS-KNALILGTTGYWLFVAA-NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~--Gr-r~~l~~g~~~~~~~~~~-~~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
.+...+...++.++.|++.||+ ++ |+......+...+...+ .. ..+...+....+..|++..........+..+
T Consensus 285 ~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 364 (434)
T PRK11663 285 VSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAE 364 (434)
T ss_pred HHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 4455556678889999999999 33 33322211111111111 11 1233333333333443322111112233344
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~ 210 (326)
.. |+++||+.+|+.+....+|..+||.+.+.+.+. .+|+. .|...+++.+++.+..
T Consensus 365 ~~----------~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~-----~g~~~-~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 365 CS----------HKEAAGAATGFVGLFAYLGAALSGYPLAKVLEI-----WHWTG-FFVVISIAAGISALLL 420 (434)
T ss_pred cc----------cHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHh-----cccHH-HHHHHHHHHHHHHHHH
Confidence 43 788999999999999999999999888777653 35765 3555555555544433
No 156
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=98.75 E-value=1.5e-06 Score=83.28 Aligned_cols=231 Identities=18% Similarity=0.175 Sum_probs=133.0
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHH--HHhhhhHHHHHHhHhhhhhcCCC
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASI--IWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~--~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
.+..+..|.++||+|||..+....+...+...+.....|+.++ +.|+..+. .+....+|++++.
T Consensus 76 ~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~~~~~~----~~~l~g~~~~~~s~~~a~vadis---------- 141 (463)
T KOG2816|consen 76 LISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQGYWFFL----LLGLSGGFSAIFSVGFAYVADIS---------- 141 (463)
T ss_pred HHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHHHHHhh----hcccccchhhhhhhhhhheeecc----------
Confidence 4556788999999999999999887766655555444455544 44444432 4455677777775
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccccccc-cc-c-
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKE-TA-D- 226 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~~~~~-~~-~- 226 (326)
.+++|....|+.+.....+..+||.++..+....+ - ...+.+..+..+++.+. .+++||+.++++++ .. +
T Consensus 142 ~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~-----~-a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~ 215 (463)
T KOG2816|consen 142 SEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG-----I-ALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE 215 (463)
T ss_pred chhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC-----c-hHHHHHHHHHHHHHHHHHhhccccccCccccccccccc
Confidence 77899999999999999999999999887765431 1 22344444445554443 36788877654432 10 0
Q ss_pred ccchhh--chHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhcccccccc--cccCcchHHHHHHHHHHHHHHHHH
Q 020422 227 ASVNFY--SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVT--PALGVSGVGGAMAVYGAFDAISLL 302 (326)
Q Consensus 227 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~gi~~~~g~~ 302 (326)
....+. ....+.++...+.-.+|..+.+....++.-.....-.....+.+.. -+.+.+..+......++...++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l 295 (463)
T KOG2816|consen 216 LTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQL 295 (463)
T ss_pred cCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHH
Confidence 000010 1112223333342244555554444333322222111111122222 245666777777777778888888
Q ss_pred Hhhhhhhh---hhhHHhHHHHHhh
Q 020422 303 GFATFFSV---HSLLVGLPLVFHL 323 (326)
Q Consensus 303 ~~G~l~Dr---R~~~~~~g~~~~~ 323 (326)
+...+.-+ -|.++..|.+.+.
T Consensus 296 ~~~~~l~~~l~~~~~i~lGl~~~~ 319 (463)
T KOG2816|consen 296 LLLPLLSSILGEKRLISLGLLSEF 319 (463)
T ss_pred HHHHHHHHHHhhhhHhhHHHHHHH
Confidence 87744444 2336666665443
No 157
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.75 E-value=2.8e-07 Score=87.64 Aligned_cols=111 Identities=10% Similarity=-0.105 Sum_probs=81.3
Q ss_pred HHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh-hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhh
Q 020422 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (326)
Q Consensus 69 ~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~-~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~ 146 (326)
.+...++.++.++++||+|+|+++..+.++.++..... +. ++.+.+++..++.|++.+...+...++++|..|..
T Consensus 267 ~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--- 343 (437)
T TIGR00792 267 IVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYG--- 343 (437)
T ss_pred HHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---
Confidence 34445667888999999999999998887665544433 32 35555666778889999988888788888775311
Q ss_pred cCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 147 ~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+-..+++++|...|++.....+|..+|+.+.+.+..
T Consensus 344 ~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~ 379 (437)
T TIGR00792 344 EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILG 379 (437)
T ss_pred hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001134567999999999999999999988877754
No 158
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.74 E-value=2.6e-07 Score=91.35 Aligned_cols=187 Identities=17% Similarity=0.179 Sum_probs=113.1
Q ss_pred HHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC-C-----
Q 020422 113 TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-G----- 186 (326)
Q Consensus 113 ~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~-~----- 186 (326)
.++.+-++.|+|+.++++-..+|+.|+. .+++-....|+++++..+|.++|-+++.+.++.+. .
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnv----------k~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~ 308 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNV----------KKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPI 308 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCccccccc----------cccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCC
Confidence 5667789999999999999999999997 56778899999999999999999999988775331 0
Q ss_pred --CCCCch-----hHHHHHHHHHHHHHHHHHHhccCCcccccc-----c-c---cccc-chhhc----hHHHHHHHHHHh
Q 020422 187 --GSTSGT-----TLLFIVFLGVITLGTILMCFLRKEEDKGEK-----E-T---ADAS-VNFYS----YLVSLSKSITTL 245 (326)
Q Consensus 187 --~~~~wr-----~~~f~~~~~~~~l~~il~~~l~~~~~~~~~-----~-~---~~~~-~~~~~----~~~~~~~~~~~~ 245 (326)
...+.| |+=|++.+.+.++..+.++++|+..++..+ + . .+.+ .++.. ..++..+.+++.
T Consensus 309 ~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~l 388 (735)
T KOG3626|consen 309 GITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRL 388 (735)
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHH
Confidence 011111 223555555556666667788875442110 0 0 0000 11111 233444556778
Q ss_pred hhcchhHHHHHHHHHhhHHHHHhhhcccccccccccCc--chHHHHHHHHHH-HHHHHHHHhhhhhhh
Q 020422 246 LADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGA-FDAISLLGFATFFSV 310 (326)
Q Consensus 246 ~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~~~gi-~~~~g~~~~G~l~Dr 310 (326)
++||.+...+..-..--+...-++ .|.|-+...+.+. +.+-.++...++ +.++|.+++|++..|
T Consensus 389 l~N~if~~~~l~~~~~~~~~~G~~-tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikk 455 (735)
T KOG3626|consen 389 LSNPIFMLVVLASVIESLAITGYI-TFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKK 455 (735)
T ss_pred hcCchHHHHHHHHHHHHHHHhhHH-HhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeee
Confidence 888888775443222222122222 3444443333443 344444443333 345678899999998
No 159
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.72 E-value=9.4e-07 Score=84.83 Aligned_cols=130 Identities=15% Similarity=-0.045 Sum_probs=70.4
Q ss_pred HHHhhhhhhHHHHHHHh--chhhHHH-HHhHHHHHHHHHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 70 TSFTCFSLVASLVVRVL--GSKNALI-LGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~--Grr~~l~-~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
....++.++.|+++||+ |||+... ....+..+..... . ..+....+.+..+.|.+..........+..+..
T Consensus 300 ~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 376 (452)
T PRK11273 300 YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELA--- 376 (452)
T ss_pred HHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHc---
Confidence 34455678899999999 5554332 2222222222221 2 223333333334444432222222223444444
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHH-HHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFV-GNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~-G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
|+++||+++|+.......|..+ ||.+.+.+... .+|+. .|.+..+.++++.+....+..
T Consensus 377 -------p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~-----~g~~~-~f~~~~~~~~~~~~~~~~~~~ 436 (452)
T PRK11273 377 -------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-----FGWDG-GFMVMIGGSILAVILLIVVMI 436 (452)
T ss_pred -------ChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHH-----hcchH-HHHHHHHHHHHHHHHHHHHhc
Confidence 8889999999998877777654 78777776543 24654 355555666666555444333
No 160
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.71 E-value=1.2e-06 Score=82.50 Aligned_cols=124 Identities=15% Similarity=0.134 Sum_probs=84.8
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
+...++.++.|++.||+|||+.+.++.+++++..... ..++.+.++..+++.|++.+........+..+..
T Consensus 265 i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-------- 336 (396)
T TIGR00882 265 LLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQF-------- 336 (396)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 3445567888999999999999999888777655543 5677777788899999887665544444444433
Q ss_pred CCcccchhhHHHH-HHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH
Q 020422 149 LHEGTVIGSFNGE-FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL 209 (326)
Q Consensus 149 ~~~~~~rg~~~gi-~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il 209 (326)
+++.++...+. +....++|..+|+++++.+.+. .|++. .|.+..++..+..++
T Consensus 337 --~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~-----~G~~~-~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 337 --DVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDS-----IGFQG-AYLVLGCIVLLFTLI 390 (396)
T ss_pred --CcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHh-----cccHH-HHHHHHHHHHHHHHH
Confidence 55556665555 5667889999999998888653 25655 354445444444433
No 161
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.70 E-value=1.7e-07 Score=91.15 Aligned_cols=135 Identities=11% Similarity=0.020 Sum_probs=79.1
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hh-h---hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NL-F---PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~-~---~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
.++.+++++++||+|||++++.+..+.++.... .. . ++...+...-+...++....++....+.+|..
T Consensus 349 i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~------- 421 (502)
T TIGR00887 349 VPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVF------- 421 (502)
T ss_pred HHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccC-------
Confidence 345677899999999999998877665443322 11 1 11111111111111111112223345566765
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC-C-C---CCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-G-G---STSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~-~-~---~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|++.|+++.|+......++.++++.+.+.+..... + + ..+.. ..|++++++.+++.+..+++||++.
T Consensus 422 ---p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~i~~~~lpEt~~ 493 (502)
T TIGR00887 422 ---PTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMG-HVLEIFALFMFLGILFTLLIPETKG 493 (502)
T ss_pred ---chhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccch-HHHHHHHHHHHHHHHHheEeccCCC
Confidence 88999999999999999999999887766644210 0 0 01222 2366667666666555667788654
No 162
>PRK09848 glucuronide transporter; Provisional
Probab=98.70 E-value=3.3e-07 Score=87.77 Aligned_cols=108 Identities=13% Similarity=-0.057 Sum_probs=78.7
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh--hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
..+++++.+++.||+|+|+++.+|.++..+..+.. +. ++++.++..-++.|+|.+...+...+..++..|....
T Consensus 277 ~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~--- 353 (448)
T PRK09848 277 TVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEY--- 353 (448)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH---
Confidence 34567788999999999999999887765544433 32 3555566667889999999888888888887642111
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
...++++|...|++.....+|..+|+.+.+.+..
T Consensus 354 ~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~ 387 (448)
T PRK09848 354 LTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILG 387 (448)
T ss_pred hhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0123456999999999999999999988766653
No 163
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.70 E-value=1.6e-07 Score=87.01 Aligned_cols=85 Identities=14% Similarity=0.015 Sum_probs=67.5
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh--hh----------hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--LF----------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~--~~----------~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
.++.+++|++.||+|||+.+..+.++.++..... .. ++.+.+..+.++.|++.+..++...+++.+.+
T Consensus 259 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 338 (356)
T TIGR00901 259 ILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLS 338 (356)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 4667889999999999999888887665544432 22 34566667788999999999999999999987
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHH
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFA 167 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~ 167 (326)
|+++||+.+|++.+..+
T Consensus 339 ----------p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 339 ----------NPKFGATQMALLSSLSA 355 (356)
T ss_pred ----------CCCccHHHHHHHHHHHh
Confidence 99999999998866543
No 164
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.70 E-value=2.2e-07 Score=87.01 Aligned_cols=108 Identities=9% Similarity=-0.059 Sum_probs=80.0
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-h-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
+...++..++.++.+++.||+|||+.+..+.++.++.... . ..++.+.+.+...+.|+..+..++....++.+..
T Consensus 281 ~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 357 (405)
T TIGR00891 281 VFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYF--- 357 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhC---
Confidence 3344455677889999999999999998877654333322 2 2345555555556777776666666667777765
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
|+++||+++|+.+....+|..+||++.+.+.+.
T Consensus 358 -------~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 358 -------PTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred -------CcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889999999999999999999999998888754
No 165
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.69 E-value=7e-07 Score=86.46 Aligned_cols=108 Identities=7% Similarity=-0.094 Sum_probs=72.6
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
+...++..+++++.|++.||+|||+++..+.++.++..+.. . .++++.+....++.|.......+...+++.+..
T Consensus 318 ~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 395 (496)
T PRK03893 318 FFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYF-- 395 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhC--
Confidence 44444556778899999999999999888776554443322 2 233333333444443333233344445666654
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
|+++||+.+|+++....+|..+|+.+++.+.+.
T Consensus 396 --------~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 396 --------DTEQRAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred --------CHHHhhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 888999999999999999999999998887654
No 166
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.69 E-value=2.4e-06 Score=80.73 Aligned_cols=129 Identities=16% Similarity=0.259 Sum_probs=89.9
Q ss_pred hhHHHHHHHhchhhHHHHHhHHHHH-HHHH-hhhhhhHHH----HHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCC
Q 020422 77 LVASLVVRVLGSKNALILGTTGYWL-FVAA-NLFPSWYTM----VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 77 l~~g~l~d~~Grr~~l~~g~~~~~~-~~~~-~~~~~~~~l----~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
++.+++.+|+|.|+++.++.+.+++ +... ...++.+.. ...-.+.|+.-+..|.+...|+.+.+
T Consensus 261 ~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~---------- 330 (400)
T PF03825_consen 261 FFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIA---------- 330 (400)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC----------
Confidence 3578999999999999999988877 4333 232443332 23345799999999999999999997
Q ss_pred cccchhhHHHHHHHH-HHHhHHHHHHHHHHHhcCCC-CCCCCchhHHHHHHHHHHHHHHHHH-HhccCC
Q 020422 151 EGTVIGSFNGEFWGM-FASHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVITLGTILM-CFLRKE 216 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~-~~~g~~~G~li~~~l~~~~~-~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~ 216 (326)
|++.|+++.+++... ..+|..+|+.+++.+.+..+ .+...|.. +|.+.+++.++..+++ ++.||+
T Consensus 331 p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~-~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 331 PPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSA-VFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred CccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHH-HHHHHHHHHHHHHHHHHhhccCC
Confidence 889999999998875 57899999999999887543 11122322 3444444444444443 344543
No 167
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.68 E-value=2e-06 Score=81.23 Aligned_cols=102 Identities=8% Similarity=-0.041 Sum_probs=73.2
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h-----hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~-----~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
....++.++.+++.||+|+|+.+..+.++.++..... . .+++..++..-++.|+|.+...+.........
T Consensus 262 ~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~---- 337 (406)
T PRK15402 262 GALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFS---- 337 (406)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh----
Confidence 3456677889999999999999888776554433322 1 12444455667889999988776544433222
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
++++||+..+.+......|..+|+.+++.+..
T Consensus 338 -------~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 338 -------SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred -------ccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45899999999999898999999888877644
No 168
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.67 E-value=5.5e-07 Score=86.79 Aligned_cols=107 Identities=9% Similarity=-0.030 Sum_probs=79.1
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhh---h--hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL---F--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~---~--~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
....++..++.++.|++.||+|||+.+..+.++.++...... . .++..++..-++.|+|.+..++.......+..
T Consensus 298 ~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~ 377 (485)
T TIGR00711 298 LPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGL 377 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 334455667788999999999999999888776655444321 1 23455555678899999987765554444433
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
|+++||++.|++.....+|..+|+.+.+.+..
T Consensus 378 ----------~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 378 ----------PPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred ----------CHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999988777654
No 169
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.67 E-value=1.5e-06 Score=83.68 Aligned_cols=140 Identities=12% Similarity=0.063 Sum_probs=83.9
Q ss_pred HHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h--hhhh--HHHHHHHHHhhhhhHHHH-hhhhHHHHHHhH
Q 020422 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FPSW--YTMVPASLYLGFAASIIW-VGEGTYLTAAAL 141 (326)
Q Consensus 68 ~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~--~~~~--~~l~~~r~l~G~g~g~~~-~~~~~~l~~~~~ 141 (326)
..+...++.+++++++||+|||+.++.+.++.++..... . .++. .....+-++.+.+.+..+ +....++.|..
T Consensus 315 ~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~- 393 (479)
T PRK10077 315 VGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIF- 393 (479)
T ss_pred HHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhC-
Confidence 334556778899999999999999999888766544432 1 1111 112223334444444333 34566777775
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc-CCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCcc
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEED 218 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~-~~~~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~~~ 218 (326)
|+++||+++|+......+|.++++.+.+.+.. ....+..+|+. .|.++.+..+++.++. ++.||++.
T Consensus 394 ---------p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 394 ---------PNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGF-SYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred ---------ChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCcc-HHHHHHHHHHHHHHHHHhccccCCC
Confidence 88899999999999888998888766544331 00011245544 3555555555444443 45566543
No 170
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.64 E-value=4.1e-09 Score=92.26 Aligned_cols=132 Identities=14% Similarity=0.294 Sum_probs=95.8
Q ss_pred HHHHHhHHhhhhhhcCCCCchhHHHHHHHHHHh----hhhhhHHHHHHH-hchhhHHHH-HhHHH---HHHHHHhhhhhh
Q 020422 41 FLAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRV-LGSKNALIL-GTTGY---WLFVAANLFPSW 111 (326)
Q Consensus 41 ~~~~~~~~~l~~~l~~~~~~g~~~~~~~~~~~~----~~~l~~g~l~d~-~Grr~~l~~-g~~~~---~~~~~~~~~~~~ 111 (326)
+..|.....+|.+++.|.+.......++|..|. +-++++|++.|| +|-|+.-.+ ..+++ .+|++....+.+
T Consensus 57 yfcyd~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aF 136 (459)
T KOG4686|consen 57 YFCYDAPGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAF 136 (459)
T ss_pred eeecCCchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHH
Confidence 345566678888998888777766666777663 446788998875 555543222 22211 233333467889
Q ss_pred HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 112 ~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+++.+.|++-|+|.--+-.+|.+|...+. ..||.+.++|++.+..-+|+.+.-.+.+++..
T Consensus 137 w~M~~GRF~FGIGgESlAVaQN~yav~wF----------KGKELn~vfGlqlSvAR~GstvNf~lm~~ly~ 197 (459)
T KOG4686|consen 137 WTMLAGRFLFGIGGESLAVAQNKYAVYWF----------KGKELNFVFGLQLSVARLGSTVNFLLMPFLYD 197 (459)
T ss_pred HHHHhhheeeccCchhhhhhhcceeEEEe----------cCccccchhhHHHHHHHhhceeeeeecHHHHH
Confidence 99999999999999888888888887776 78899999999998888888887666666654
No 171
>PRK10054 putative transporter; Provisional
Probab=98.63 E-value=2.8e-06 Score=80.19 Aligned_cols=98 Identities=10% Similarity=-0.006 Sum_probs=76.2
Q ss_pred hhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h-hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcc
Q 020422 75 FSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (326)
Q Consensus 75 ~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~ 152 (326)
.+++.+.+.||+++|+.+..+.++.++..... + .++.+.+..+.++.|+|.+...+...+++.+.. |+
T Consensus 260 ~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~----------p~ 329 (395)
T PRK10054 260 LQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIA----------PP 329 (395)
T ss_pred ehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhC----------Cc
Confidence 34677899999999999988877666554443 3 356666667889999999988888777787776 78
Q ss_pred cchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 153 TVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 153 ~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
+.||+.++... ...+|..+||.+++.+.+.
T Consensus 330 ~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~ 359 (395)
T PRK10054 330 GMKASYFSAQS-LGWLGAAINPLVSGVILTT 359 (395)
T ss_pred ccceehHhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 89999988754 4558899999998888764
No 172
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.62 E-value=1.3e-06 Score=82.44 Aligned_cols=96 Identities=11% Similarity=-0.028 Sum_probs=71.7
Q ss_pred hHHHHH-HHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccch
Q 020422 78 VASLVV-RVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI 155 (326)
Q Consensus 78 ~~g~l~-d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~r 155 (326)
+.++.. ||++.++.+..+.++.++..... ..++++.++....+.|++.+...+...+++.+.. |+++|
T Consensus 262 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~----------p~~~~ 331 (400)
T PRK11646 262 PIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLSASLA----------DARAR 331 (400)
T ss_pred HHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHHHhcC----------Ccccc
Confidence 334444 55776776677666665544433 4566666666778888888877777777777765 88999
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 156 GSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 156 g~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
|+.+|++......|..+|+.+++.+.+.
T Consensus 332 g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 332 GSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred hhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 9999999999999999999999888764
No 173
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.62 E-value=1e-05 Score=77.39 Aligned_cols=232 Identities=16% Similarity=0.127 Sum_probs=128.6
Q ss_pred hhhhHHHHHHHhc-----hhhHHHHHhHHHHHHHHHh-h----hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 75 FSLVASLVVRVLG-----SKNALILGTTGYWLFVAAN-L----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 75 ~~l~~g~l~d~~G-----rr~~l~~g~~~~~~~~~~~-~----~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
..++.|.++|-+- ||+-++++.++-+++.... . ..+.....+.-.+.-+|.+..-..+-+...|..++
T Consensus 40 ~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~-- 117 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARR-- 117 (433)
T ss_pred HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhc--
Confidence 3578899999883 6666666665543333322 2 12444444455667777777777777788887755
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCcccccccc
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKET 224 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~ 224 (326)
.|++||...+..+....+|..+|..+++.+.... +.+.. |.+...+..+..+..+++.|+..++++++
T Consensus 118 ------~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~-----~~~~~-f~i~~~~~~l~~~~~~~~~~e~~~~~~~~ 185 (433)
T PF03092_consen 118 ------EPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF-----GPQGV-FLISAALPLLMLIVALFLLEERKVRPADE 185 (433)
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC-----CCeEE-ehHHHHHHHHHHHHHHHhhhhccccccch
Confidence 4445999999999999999999998887776543 34442 44445454444444444444222111110
Q ss_pred -c---cccchh-hchHHHHHHHHHHhhhcchhHHHHH-HHHHhhHHHHHhhh-cccccccccc---cCcchHHHHHHHHH
Q 020422 225 -A---DASVNF-YSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWA-EFTKEIVTPA---LGVSGVGGAMAVYG 294 (326)
Q Consensus 225 -~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~~~~~~~~-~~~~~~~~~~---~~~~~~g~~~~~~g 294 (326)
. +.+.+. ....++..+++++.++++.++.... ..++.........+ .|.-.-..++ ++.+..+.+.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~ 265 (433)
T PF03092_consen 186 VFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGS 265 (433)
T ss_pred hhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHH
Confidence 0 000011 1125667777888888887776433 21111111111111 1110000122 45556677777777
Q ss_pred HHHHHHHHHhh-hhhhh--hhhHHhHHHH
Q 020422 295 AFDAISLLGFA-TFFSV--HSLLVGLPLV 320 (326)
Q Consensus 295 i~~~~g~~~~G-~l~Dr--R~~~~~~g~~ 320 (326)
++..+|..+.. +++++ |+.+.....+
T Consensus 266 ~~~l~g~~~y~~~~~~~~~R~~~~~t~~~ 294 (433)
T PF03092_consen 266 IASLLGILLYRKYFSNWSWRRIFVVTTLV 294 (433)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 77777777665 56666 6665554443
No 174
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.61 E-value=1.7e-06 Score=82.44 Aligned_cols=152 Identities=18% Similarity=0.071 Sum_probs=100.7
Q ss_pred hhHHHHHHHHHHHHHHHHhHH----hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH
Q 020422 28 RDVHILSCAFLLIFLAYGAAQ----NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (326)
Q Consensus 28 ~~~~~l~l~~~~~~~~~~~~~----~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~ 103 (326)
|++..+.+..++...+....+ ...++...+.+....-..+.++...++.++.++++||+|+|+++..+.+++++..
T Consensus 225 r~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~ 304 (428)
T PF13347_consen 225 RPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGF 304 (428)
T ss_pred chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHH
Confidence 445555555554444443322 2222222222322222344455556677888999999999999999999887766
Q ss_pred HHh-hh--hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 104 AAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 104 ~~~-~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
+.. +. +|.+.+++.-++.|++.+..++...+.++|..|...+.. .+++.|...|++.....++..+++.+.+.+
T Consensus 305 ~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~t---g~r~~g~~~s~~~~~~k~~~~la~~i~g~~ 381 (428)
T PF13347_consen 305 LLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKT---GRRREGMYFSVNSFFIKIGQGLAGAIVGLL 381 (428)
T ss_pred HHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhc---CCCchHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence 653 44 488888888899999999999988999999875322111 233457788887777788888888776665
Q ss_pred hc
Q 020422 181 LK 182 (326)
Q Consensus 181 ~~ 182 (326)
..
T Consensus 382 l~ 383 (428)
T PF13347_consen 382 LA 383 (428)
T ss_pred HH
Confidence 44
No 175
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.59 E-value=3.7e-06 Score=78.96 Aligned_cols=120 Identities=14% Similarity=-0.022 Sum_probs=77.0
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhh-------hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANL-------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~-------~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
.++.++.|++.||+|+|+.+..+.++.++.....+ .++...++..-.+.+++.+...++..++..+..
T Consensus 258 ~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----- 332 (390)
T TIGR02718 258 LLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFA----- 332 (390)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 34567889999999999999887655422222111 123333334445556666666665555555554
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
.+++++|+.+++.+...++|..+|+.+++.+.+. .|++. .|....++.+++.
T Consensus 333 ----~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~-----~G~~~-~f~~~~~~~l~a~ 384 (390)
T TIGR02718 333 ----GDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDR-----FGYAG-GFLSGTVLAVLAI 384 (390)
T ss_pred ----CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HccHH-HHHHHHHHHHHHH
Confidence 1347899999999999999999999999888653 24544 3544444444443
No 176
>PRK15075 citrate-proton symporter; Provisional
Probab=98.59 E-value=4.7e-06 Score=79.55 Aligned_cols=104 Identities=17% Similarity=0.042 Sum_probs=66.8
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHH-H--hh--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA-A--NL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~-~--~~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
.+..++.++.|+++||+|||+++..+.++..+... . .. .+++..+.....+.|++.+...+....++.|..
T Consensus 285 ~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~---- 360 (434)
T PRK15075 285 VSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVM---- 360 (434)
T ss_pred HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHC----
Confidence 34456678899999999999998876543322111 1 11 223333333445566777766665566777775
Q ss_pred hhcCCCcccchhhHHHHHHHHHH-HhHHHHHHHHHHHhcC
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFA-SHQFVGNLITLAVLKD 183 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~-~g~~~G~li~~~l~~~ 183 (326)
|+++||+..|+.+.... ++..++|.+.+.+.+.
T Consensus 361 ------p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~ 394 (434)
T PRK15075 361 ------PAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHV 394 (434)
T ss_pred ------CCCccchheeHHHHHHHHHHhhhHHHHHHHHHHh
Confidence 88999999998655444 3466788877776554
No 177
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.58 E-value=1.7e-06 Score=81.80 Aligned_cols=127 Identities=8% Similarity=0.008 Sum_probs=96.9
Q ss_pred hhhhHHHHHHHh-chhhHHHHHhHHHHHHHHHh-hh--hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCC
Q 020422 75 FSLVASLVVRVL-GSKNALILGTTGYWLFVAAN-LF--PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 75 ~~l~~g~l~d~~-Grr~~l~~g~~~~~~~~~~~-~~--~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
..+++|+++||+ |+|+++..|.+++.+..+.. .. .+...++++-++.++|.|++=+...+.+++.+++
T Consensus 77 t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~-------- 148 (498)
T COG3104 77 TPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPK-------- 148 (498)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCC--------
Confidence 467899999995 99999999999998877764 33 2566777788889999999999999999998765
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
.+.+|-..+++++.+.++|+.++|++.+.+.++ ++|.. -|....+-..++.+.+.+.++
T Consensus 149 ~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~-----~g~~~-gF~~aavGm~~gl~~f~~~~r 207 (498)
T COG3104 149 DDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN-----YGWHV-GFGLAAVGMIIGLVIFLLGRR 207 (498)
T ss_pred CCcccCCCccEEEEEeehHHHHHHHHHHHHHHh-----hCHHH-HHHHHHHHHHHHHHHHHHccc
Confidence 444578889999999999999999998877654 35654 354444434456565555554
No 178
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.58 E-value=2.9e-06 Score=80.41 Aligned_cols=107 Identities=15% Similarity=0.090 Sum_probs=67.9
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhh-hhHHHHHHHHHhhhhh--HHHHhhhhHHHHHHhH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP-SWYTMVPASLYLGFAA--SIIWVGEGTYLTAAAL 141 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~-~~~~l~~~r~l~G~g~--g~~~~~~~~~l~~~~~ 141 (326)
+....+..+++++.|++.||+|||+.+..+.++..+..... ..+ +...++ .-.+.|++. ....+....++.+..
T Consensus 273 ~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 350 (426)
T PRK12307 273 TAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLL-GACLFGLMATNVGVGGLVPKFLYDYF- 350 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHH-HHHHHHHHHhcccHhHHHHHHHHHhC-
Confidence 33344556677889999999999999888876554433322 222 211111 222333322 122222334555554
Q ss_pred hhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
|+++||+++|+......+|..+||.+.+.+...
T Consensus 351 ---------p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~ 383 (426)
T PRK12307 351 ---------PLEVRGLGTGLIYNLAATSGTFNSMAATWLGIT 383 (426)
T ss_pred ---------cHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHc
Confidence 888999999999999999999999998877643
No 179
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.58 E-value=6.2e-06 Score=78.69 Aligned_cols=132 Identities=11% Similarity=0.048 Sum_probs=68.7
Q ss_pred HHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh---h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN---L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 69 ~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~---~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.....+++++.|+++||+|||+++..+.++.++..... . .++....+..-.+.+...+...+....+..|.+
T Consensus 289 ~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~f--- 365 (432)
T PRK10406 289 LFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMF--- 365 (432)
T ss_pred HHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
Confidence 34446677888999999999998877655433322211 1 112222211112222233333333456677775
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHH-hHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~-g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
|++.|+.+.|+.+...+. .....|.+...+. .. ++....++...+..+++.+..++++++
T Consensus 366 -------p~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~-~~-----g~~~~~~~~~~~~~~i~~~~~~~l~~~ 426 (432)
T PRK10406 366 -------PAQVRALGVGLSYAVANALFGGSAEYVALSLK-SI-----GMETAFFWYVTLMAVVAFLVSLMLHRK 426 (432)
T ss_pred -------CCCccchhhhHHHHHHHHHHHhHHHHHHHHHH-Hh-----CCCcHHHHHHHHHHHHHHHHHHHhhhc
Confidence 889999999998765443 2233555555432 21 222323333344444554444555543
No 180
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.57 E-value=2.7e-06 Score=82.96 Aligned_cols=116 Identities=19% Similarity=0.160 Sum_probs=85.3
Q ss_pred CCchhHHHHHHHHHHhhhhhhH----HHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhh
Q 020422 58 GNLGTISLGILYTSFTCFSLVA----SLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGE 132 (326)
Q Consensus 58 ~~~g~~~~~~~~~~~~~~~l~~----g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~ 132 (326)
.+.+....+++..+++++.+.+ +.+.+|+++++.+..+.+++++..+.. +.++.+..+++-++.|++.....+..
T Consensus 249 l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~ 328 (524)
T PF05977_consen 249 LGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSL 328 (524)
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445666666666665544 566677888888888888877766654 67888877777788888877766555
Q ss_pred hHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
.+.+-+. .|++.|||.++++......+..+|.++.+.+...
T Consensus 329 ~t~~Q~~----------~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~ 369 (524)
T PF05977_consen 329 NTLVQLS----------VPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADH 369 (524)
T ss_pred HHHHHHh----------CCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444443 3899999999999999999999999998887654
No 181
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.56 E-value=7.8e-06 Score=74.61 Aligned_cols=108 Identities=14% Similarity=0.057 Sum_probs=76.0
Q ss_pred hHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 62 ~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
....+.....+.++.+..+++.||+|+|+++.++.++..+..... ..++...++ +-.+.|++.+..+|...+...+..
T Consensus 181 ~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~~-~~~l~g~~~s~i~P~~~s~a~~~~ 259 (310)
T TIGR01272 181 AHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAMW-FVLALGLFNSIMFPTIFSLALNAL 259 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhh
Confidence 334677777888999999999999999999888776655544433 333333332 445789999999998766665543
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+++.+++.++. ....+|..++|.+.+.+.+
T Consensus 260 -----------~~~~~~asai~-~~~~~Gg~i~P~l~G~lad 289 (310)
T TIGR01272 260 -----------GRHTSQGSGIL-CLAIVGGAIVPLLQGSLAD 289 (310)
T ss_pred -----------hhhhhhhHHHH-HHHHhcchHHHHHHHHHHH
Confidence 34456777775 5666888889887777654
No 182
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.55 E-value=3.7e-06 Score=78.61 Aligned_cols=170 Identities=9% Similarity=0.018 Sum_probs=89.4
Q ss_pred hhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchh---hHHHH-HhHHHHHHH
Q 020422 28 RDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSK---NALIL-GTTGYWLFV 103 (326)
Q Consensus 28 ~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr---~~l~~-g~~~~~~~~ 103 (326)
++.+.+.+.+++....+.......+++..+.+.+..........+..+.+-.++++||..|| +.... .....++..
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~~~~~~~l~~~~g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~ 271 (368)
T TIGR00903 192 KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDIAGDAVALAILAGLIGVAVIPDRVARAGLRSIYIRAAALLIAAFF 271 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 45566666665555555444433333322322222111112222223334457777777653 33222 222222221
Q ss_pred HHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 104 AAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 104 ~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
... ...+....+..-.+.|++....++...++.+|.+ |++.||++.|+.+....+|..+++.+.+.+..
T Consensus 272 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~ 341 (368)
T TIGR00903 272 LALAFELNRLALFAFIGIAGLLMLPAYAIIMDWIGKFC----------DKELHGKAAGAIGFTSRAISVALALAAMLFIS 341 (368)
T ss_pred HHHHHccccHHHHHHHHHHHHhhhhhHHHHHHHHHHhc----------chhhcCcccchhhHHHHHHHHHHHHHHHHHhc
Confidence 111 2223333333334556666666666667778876 88999999999999999999999887766652
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 183 DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 183 ~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
. -.. .|..+.+..+++.+...++++
T Consensus 342 ~-------~~~-~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 342 S-------AEA-YFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred C-------HHH-HHHHHHHHHHHHHHHHHhCCC
Confidence 1 112 355555555555544444454
No 183
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.55 E-value=2.2e-06 Score=83.35 Aligned_cols=103 Identities=16% Similarity=0.004 Sum_probs=78.0
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh--h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~--~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
+...++.++.|++.||+|+|+.+..+.++.++..... . .++.+.....-++.|+|.|...+.......+..
T Consensus 306 ~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~----- 380 (495)
T PRK14995 306 VASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAA----- 380 (495)
T ss_pred HHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcC-----
Confidence 4556678899999999999999888877665544322 1 234444555678999999988776666565554
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
|++++|.+.+++....++|..+|+.+.+.+..
T Consensus 381 -----~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 381 -----PPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred -----CHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999988776643
No 184
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.54 E-value=4.5e-06 Score=77.23 Aligned_cols=109 Identities=9% Similarity=0.013 Sum_probs=74.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHHh-chhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVL-GSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~-Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
.+...++..+++++.|++.||+ +||+.+..+.++.++..... +.++..... .-++.|++.+..++...+.+.+..
T Consensus 238 ~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~-- 314 (355)
T TIGR00896 238 LALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRS-- 314 (355)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhc--
Confidence 4555566778889999999999 56667666666555544433 333322222 346789999988877655554432
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
.+++++|...++......++..+||.+.+.+.+.
T Consensus 315 -------~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~ 348 (355)
T TIGR00896 315 -------RQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDI 348 (355)
T ss_pred -------cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1456778999988888888889999888877654
No 185
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.53 E-value=1.2e-05 Score=75.49 Aligned_cols=177 Identities=10% Similarity=0.093 Sum_probs=106.7
Q ss_pred cchhHHHHHHHHHHHHHHHHhH----HhhhhhhcCCCCchhHHHHHHHHHHhhhh----hhHHHHHHHhchhhHHHHHhH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAA----QNLETTVNTEGNLGTISLGILYTSFTCFS----LVASLVVRVLGSKNALILGTT 97 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~----~~l~~~l~~~~~~g~~~~~~~~~~~~~~~----l~~g~l~d~~Grr~~l~~g~~ 97 (326)
+.|+.+.+.+-.......|... ...-+.+-.+.+.++...+.......+.. .+++++.+|+|.|+.++++..
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~ 297 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGV 297 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHH
Confidence 4556666555444333333322 12222333344455544444444433333 467999999999999999998
Q ss_pred HHHH-HHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHH-HHHHHHhHHHHHH
Q 020422 98 GYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEF-WGMFASHQFVGNL 175 (326)
Q Consensus 98 ~~~~-~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~-~~~~~~g~~~G~l 175 (326)
+.++ ...+.++++.+.+.+.+.+.|+-.+....+...|++++. |++-.++...+. +...++|.++.+.
T Consensus 298 i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~f----------d~rlsAt~y~v~~~~~~~~~~~i~s~ 367 (412)
T PF01306_consen 298 IMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHF----------DKRLSATLYLVGFQFAKQIGIIILSP 367 (412)
T ss_dssp HHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-----------GGGHHHHHHHHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CHhHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8777 334457889998999999999999999999999999996 545555555552 3455666666666
Q ss_pred HHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCCcc
Q 020422 176 ITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKEED 218 (326)
Q Consensus 176 i~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~~~ 218 (326)
+++.+... .|-+. .|++++.+.++..++. +.++++++
T Consensus 368 ~~G~lyd~-----~G~~~-tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 368 LAGYLYDR-----IGFQH-TYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHH-----HHHHH-HHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred hHHhhHhh-----cCcHH-HHHHHHHHHHHHHHHheeeecCCCc
Confidence 76666543 23333 3666666655544444 45555433
No 186
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.53 E-value=4e-06 Score=77.45 Aligned_cols=109 Identities=11% Similarity=-0.069 Sum_probs=67.0
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhch-hhHHH-HHhHH-HHHHHHHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGS-KNALI-LGTTG-YWLFVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Gr-r~~l~-~g~~~-~~~~~~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
.+...+...++.++.+++.||+++ |+... ..... ..+..... . .++....+...++.|+......+....+..+
T Consensus 258 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 337 (379)
T TIGR00881 258 FTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASE 337 (379)
T ss_pred HHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 344444556778889999998643 33222 21111 11111111 1 2344444455566676554444444455666
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
.. |+++||++.|++.....+|..+|+.+.+.+.+.
T Consensus 338 ~~----------~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~ 372 (379)
T TIGR00881 338 LA----------PKKAAGTAAGFVGFFAYLGGILAGLPLGYLADG 372 (379)
T ss_pred hc----------CcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHh
Confidence 65 889999999999999999999999988877653
No 187
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.51 E-value=8.7e-06 Score=75.75 Aligned_cols=100 Identities=16% Similarity=0.130 Sum_probs=56.0
Q ss_pred HHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh----h-hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhH
Q 020422 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAAL 141 (326)
Q Consensus 67 ~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~----~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~ 141 (326)
...+...++.++.+++.||+|||+++..+..+..+..... . ..+.+...++-.+.+.+.+........++.+.
T Consensus 238 ~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 315 (377)
T PRK11102 238 LNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDE-- 315 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhcc--
Confidence 3334455667889999999999999988776533322211 1 22333333333344444444444333333332
Q ss_pred hhhhhcCCCcccchhhHHHHHHHH-HHHhHHHHHHHH
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWGM-FASHQFVGNLIT 177 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~~-~~~g~~~G~li~ 177 (326)
.|+++|+..++.... +..|..+|++++
T Consensus 316 ---------~~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 316 ---------FPHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred ---------ccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899998886543 335555555443
No 188
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.51 E-value=2e-06 Score=78.81 Aligned_cols=100 Identities=17% Similarity=0.097 Sum_probs=74.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h---hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L---FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~---~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
.++......++.++.+++.||+|+|+..........+..... . .++....+..-++.|++.+..++...+++.+..
T Consensus 249 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 328 (352)
T PF07690_consen 249 FSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELV 328 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 344444555667889999999999888877776665555443 2 223445555678899999988888777777765
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHH
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~ 174 (326)
|+++||++.|++....++|..+||
T Consensus 329 ----------~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 329 ----------PPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp ----------HTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------CHHHHHHHHHHHHHHHHHHHHHCC
Confidence 889999999999999999988886
No 189
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.49 E-value=9.8e-06 Score=76.47 Aligned_cols=129 Identities=11% Similarity=-0.002 Sum_probs=70.7
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh----h-hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhh
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN----L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~----~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~ 146 (326)
..++.++++++.||+|+|+.+..+.++..+..... . .++.+.++..-.++++..+.......+......
T Consensus 259 ~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------ 332 (402)
T PRK11902 259 TIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALC------ 332 (402)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------
Confidence 45677889999999999998877666544332221 2 234454444444444444433333333333333
Q ss_pred cCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 147 ~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
++..|.+ ..+++....++|..+++.+++.+... .||+. .|.....++++++++....+.+
T Consensus 333 ~~~~~~~----~~~~~~~~~~l~~~~~~~~~G~l~~~-----~G~~~-~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 333 NRSFSAT----QYALLSALASVGRVYVGPTSGYLVEA-----YGWPG-FYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred CCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hChHH-HHHHHHHHHHHHHHHHHHHhhh
Confidence 1122433 34555555567776666666666543 46765 4555555565665554444443
No 190
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.48 E-value=9.1e-06 Score=75.59 Aligned_cols=100 Identities=16% Similarity=0.215 Sum_probs=65.8
Q ss_pred HHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh-----hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 67 ILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF-----PSWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 67 ~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~-----~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
...+...++.++.+++.||+|||+.+..+..+..+..... .. +++..++..-.+.|++.+...+....+..+.
T Consensus 250 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~- 328 (385)
T TIGR00710 250 LNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALED- 328 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 3334556678899999999999999888766555443322 11 2344445556778888888777665555543
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHH-hHHHHHHHH
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGNLIT 177 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~-g~~~G~li~ 177 (326)
.|++||++.+++...... |...+++++
T Consensus 329 ----------~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 329 ----------FPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred ----------CcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 346899999988766554 444455444
No 191
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.48 E-value=9.1e-06 Score=75.65 Aligned_cols=158 Identities=15% Similarity=0.054 Sum_probs=97.7
Q ss_pred HHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHHHHHh----hhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h-hhh
Q 020422 37 FLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-FPS 110 (326)
Q Consensus 37 ~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~~~~~----~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~-~~~ 110 (326)
++.+-..|....++.+.+.+..+.+....+.....|+ ++++++|+++|| +.|+++.....+.++..... + .++
T Consensus 221 ~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~ 299 (394)
T COG2814 221 FLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGAS 299 (394)
T ss_pred HHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcch
Confidence 3333333444456666665555555544555555554 556788999999 99999888766665544432 3 344
Q ss_pred hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCC
Q 020422 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTS 190 (326)
Q Consensus 111 ~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~ 190 (326)
.+...+.-++.|++.++ ....+..+.++ ..|+.++.+.++..+.+++|..+|..+++.+.++. +
T Consensus 300 ~~~~~~~~~~wg~a~~~---~~~~~~~~~a~--------~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~-----g 363 (394)
T COG2814 300 PALALALLFLWGFAFSP---ALQGLQTRLAR--------LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL-----G 363 (394)
T ss_pred HHHHHHHHHHHHHHhhh---hhhHHHHHhcc--------cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----c
Confidence 44444444556665554 34455565552 15688999999999999999999999998887652 4
Q ss_pred chhHHHHHHHHHHHHHHHHHHh
Q 020422 191 GTTLLFIVFLGVITLGTILMCF 212 (326)
Q Consensus 191 wr~~~f~~~~~~~~l~~il~~~ 212 (326)
+... .++-+.+.+++.++.+.
T Consensus 364 ~~~~-~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 364 YAAT-GWVGAALLLLALLLALL 384 (394)
T ss_pred hHHH-HHHHHHHHHHHHHHHHH
Confidence 4442 23334444444444433
No 192
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.47 E-value=5.5e-06 Score=88.45 Aligned_cols=106 Identities=15% Similarity=0.024 Sum_probs=82.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
+...++..+++++.+++.||+++++++.++.++.++..+.. +.++.+.+++..++.|++.++..+...+++.+..
T Consensus 276 ~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---- 351 (1146)
T PRK08633 276 AASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRA---- 351 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcC----
Confidence 33334556677889999999999998888877666555443 4567777777789999999988888777777765
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
|+++||+++|+......+|..+++.++..+.
T Consensus 352 ------p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 352 ------PEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred ------CccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999988888888877766554
No 193
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.45 E-value=2.5e-05 Score=72.55 Aligned_cols=240 Identities=9% Similarity=0.040 Sum_probs=125.6
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHH-HHHHh--hhh--hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAAN--LFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~-~~~~~--~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
++.-+..++-++..|.++|+.|+|+..+-......+ ++++. ..+ +++..++.-++..++......-..+++.+..
T Consensus 65 aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~ 144 (438)
T COG2270 65 AIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLT 144 (438)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhc
Confidence 333344466678899999999988887665544433 33332 334 3445555566777776665555666777665
Q ss_pred HhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHH--HHhcCCC-----------CCCCCchhHHHHHHHHHHHHHH
Q 020422 141 LSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL--AVLKDDK-----------GGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 141 ~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~--~l~~~~~-----------~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
++++-||.+++-|....+|+.+-.++.. +...... +....-|...-..-....+...
T Consensus 145 ----------~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~i 214 (438)
T COG2270 145 ----------TKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFAL 214 (438)
T ss_pred ----------CccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHh
Confidence 6667788777777777777766554431 1111000 0111223211111111122333
Q ss_pred HHHHhccCCccccccccccccchhhchHHHHHHHHHHhhhcchhHH-H-HHHHHHhhHHHHHhh-hcccccccccccCcc
Q 020422 208 ILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL-I-IPLFAYSGLQQAFVW-AEFTKEIVTPALGVS 284 (326)
Q Consensus 208 il~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l-~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~ 284 (326)
.+++..+++++.+.+.. ..-..++++...++++..+++++.. + .-+++..|....+.. +.|... ..+++..
T Consensus 215 Pm~~~v~~~~~~~~~~~----~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~--~~gls~~ 288 (438)
T COG2270 215 PMILNVHDAEKISSPPP----TALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA--DLGLSST 288 (438)
T ss_pred HHHhcccccccccccch----HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH--HcCccHH
Confidence 44455555443211110 0112234433333444444454443 2 233334455544422 223221 1234445
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHH
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVF 321 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~ 321 (326)
+..+......+.+++|+++.|+|.|| -|++++.+.++
T Consensus 289 ~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi 327 (438)
T COG2270 289 ELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVI 327 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHH
Confidence 66777777788899999999999999 35666666554
No 194
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.43 E-value=1.3e-05 Score=76.59 Aligned_cols=135 Identities=14% Similarity=-0.065 Sum_probs=70.4
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHH---HHHHh-h--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL---FVAAN-L--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~---~~~~~-~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
+.......++.+..|++.||+|+++....+.....+ ..... . ..+.+..+..-++.|.+.............+.
T Consensus 294 ~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 373 (438)
T TIGR00712 294 FLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALEL 373 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHh
Confidence 334445567788999999999754432333222111 11111 1 12333333333344443211111112233444
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHh-HHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH-HhccCC
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASH-QFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM-CFLRKE 216 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g-~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~-~~l~~~ 216 (326)
. |+++||++.|+++.....| ..+||.+.+.+.... +|.. .|.+..+..+++.+.. ++.+|+
T Consensus 374 ~----------~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~-----g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 436 (438)
T TIGR00712 374 A----------PKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF-----GWDG-GFMVMIGGSILAVILLIVVMIGE 436 (438)
T ss_pred c----------ChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc-----cchH-HHHHHHHHHHHHHHHHHHHHhhc
Confidence 3 8889999999998777776 467888877776532 4544 3444455455544443 445553
No 195
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.43 E-value=4.5e-06 Score=80.77 Aligned_cols=135 Identities=11% Similarity=-0.054 Sum_probs=70.6
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhh-------HHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHH
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKN-------ALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYL 136 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~-------~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l 136 (326)
.++..++..++.++.|+++||+|||+ .+....++.++..... ..++....++.-++.|++.+...+...+++
T Consensus 294 ~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 373 (476)
T PLN00028 294 AASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIV 373 (476)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccC
Confidence 34444566778899999999999762 2222222222211221 233443333334455555444333333333
Q ss_pred HHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCC
Q 020422 137 TAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKE 216 (326)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~ 216 (326)
.+. .+++||.+.|+...+..+|..+++.+ .... +..+|+.. |.+.+++.+++.++.++++.+
T Consensus 374 ~~~-----------~~~~~g~~~g~~~~~g~lg~~i~~~l----~~~~--~~~~y~~~-f~~~~~~~~i~~~~~~~~~~~ 435 (476)
T PLN00028 374 PFV-----------SRRSLGVISGLTGAGGNVGAVLTQLL----FFTG--SSYSTETG-ISLMGVMIIACTLPVAFIHFP 435 (476)
T ss_pred ccc-----------ChhhchhhhhhhhccccHHHHHHHHH----HHhc--CCccHhhH-HHHHHHHHHHHHHHHHheecc
Confidence 333 45689999998765555555555433 2211 12346553 555566666776666666544
Q ss_pred c
Q 020422 217 E 217 (326)
Q Consensus 217 ~ 217 (326)
.
T Consensus 436 ~ 436 (476)
T PLN00028 436 Q 436 (476)
T ss_pred c
Confidence 3
No 196
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.42 E-value=1.9e-05 Score=74.05 Aligned_cols=107 Identities=8% Similarity=-0.110 Sum_probs=66.0
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh--hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~--~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
+...+...+++++.+++.||+|+|+.+..+..+.++..... ..++.+.......+.+.+.....+.......+..
T Consensus 242 ~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--- 318 (382)
T PRK10091 242 MLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNA--- 318 (382)
T ss_pred HHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhC---
Confidence 33444556778899999999999999988776655544332 2344444444555666665544433222222221
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
.+++.++... ......+|..+||.+++.+.+.
T Consensus 319 ------~~~~~~~~~~--~~~~~~~g~~~Gp~~~G~l~~~ 350 (382)
T PRK10091 319 ------KGGELLGAAG--GQIAFNLGSAIGAYCGGMMLTL 350 (382)
T ss_pred ------CcchHHHHHH--HHHHHHHHHHHHHHHhHHHHHc
Confidence 2444555543 3566789999999999887653
No 197
>PRK09669 putative symporter YagG; Provisional
Probab=98.41 E-value=7.6e-06 Score=78.35 Aligned_cols=107 Identities=7% Similarity=0.002 Sum_probs=75.8
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHH-Hhh--hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCC
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVA-ANL--FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~-~~~--~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~ 149 (326)
.++.++.+++.||+|+|+.+..+.++.++... ..+ .++.+.+++..++.|++.+...+...+.++|..|.. +. .
T Consensus 278 ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~-e~--~ 354 (444)
T PRK09669 278 LFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE-EK--R 354 (444)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh-hh--h
Confidence 34557788999999999999988765554332 222 345666667778999999999998888998887421 00 0
Q ss_pred CcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 150 ~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
.-+++.|..+|.+.....+|..+|+.+++.+..
T Consensus 355 ~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~ 387 (444)
T PRK09669 355 SGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILA 387 (444)
T ss_pred cCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012234667788888888999999988877654
No 198
>PRK11043 putative transporter; Provisional
Probab=98.40 E-value=3e-05 Score=72.99 Aligned_cols=100 Identities=13% Similarity=0.013 Sum_probs=66.7
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-----h-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-----N-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-----~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
...++.++.+++.||+|+|+.+....+..++.... . ..+++..++..-.+.|++.+..++...++..+.
T Consensus 250 ~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 324 (401)
T PRK11043 250 AFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRP----- 324 (401)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----
Confidence 44566677889999999999776555443332221 1 123444455556778888888877765555443
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.|+++|++.|++......+...++.+.+.+.
T Consensus 325 ------~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 325 ------FPQATGKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred ------CcccChHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3568999999998877777777777666554
No 199
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.34 E-value=7.6e-06 Score=71.53 Aligned_cols=210 Identities=15% Similarity=0.120 Sum_probs=108.6
Q ss_pred hhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhh-hHHHHHHhHhhhhhcCCCccc
Q 020422 75 FSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGE-GTYLTAAALSHASNHKLHEGT 153 (326)
Q Consensus 75 ~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~-~~~l~~~~~~~~~~~~~~~~~ 153 (326)
...+.|.++||-|||+.-+.-.+-|.+..+.-..|.|..+++.|++.|++.+.+..+- .=+++|+-+
T Consensus 88 FGtivgSLaDkqGRKracvtycitYiLsCiTKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHne------------ 155 (454)
T KOG4332|consen 88 FGTIVGSLADKQGRKRACVTYCITYILSCITKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNE------------ 155 (454)
T ss_pred HHHHHHHHHhhhccccceeeehHHHHHHHHhhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhh------------
Confidence 3456789999999999876655555444333356788999999999999999998874 445666543
Q ss_pred chhhHHHHHHHHHHHhHHHHH--------HHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccccccccc
Q 020422 154 VIGSFNGEFWGMFASHQFVGN--------LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETA 225 (326)
Q Consensus 154 ~rg~~~gi~~~~~~~g~~~G~--------li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~~~~~~~ 225 (326)
+||.-.-+....++=...+|+ +.+-.+.... +.|... +|- ++.+++++-.+..+.+..++-. +.
T Consensus 156 kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~---slGPVA-PFd--AAacfLaigmAvil~~W~ENyg-dp- 227 (454)
T KOG4332|consen 156 KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF---SLGPVA-PFD--AAACFLAIGMAVILSSWSENYG-DP- 227 (454)
T ss_pred ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh---ccCCCC-chH--HHHHHHHHHHHHHHhhhhhccC-Ch-
Confidence 344333333333332222332 2222222111 122222 232 2223333323333443222111 10
Q ss_pred cccchhhchHHHHHHHH-HHhhhcchhHHHHHH-HHHhhHHHHHhhhcccccccccccCcchHHHHHHHHHHHHHHHHHH
Q 020422 226 DASVNFYSYLVSLSKSI-TTLLADVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAISLLG 303 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~gi~~~~g~~~ 303 (326)
.+++....+++.- ..+..|.+..++-.+ -.+-+..+.|.. .++|.+..+.- ..--|.++..+-++.++|+.+
T Consensus 228 ----s~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVF-LWTPaLspn~e-~iPhGfiFatFMlASmLGSSl 301 (454)
T KOG4332|consen 228 ----SENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVF-LWTPALSPNDE-EIPHGFIFATFMLASMLGSSL 301 (454)
T ss_pred ----hhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeee-eecccCCCCcc-cCCchhHHHHHHHHHHHhhHH
Confidence 1122333444432 235577887765332 122222222211 23444321111 112477888888899999999
Q ss_pred hhhhhhh
Q 020422 304 FATFFSV 310 (326)
Q Consensus 304 ~G~l~Dr 310 (326)
..++..|
T Consensus 302 a~Rl~s~ 308 (454)
T KOG4332|consen 302 ASRLLSR 308 (454)
T ss_pred HHHHHhc
Confidence 9888887
No 200
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.33 E-value=1.1e-05 Score=77.87 Aligned_cols=135 Identities=11% Similarity=-0.000 Sum_probs=94.3
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh--h---------hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN--L---------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~--~---------~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
+..++....+.+.+|++.|+++.++.++.++..... + .++.+.....-++.+++.+..+.....++.+.
T Consensus 300 ~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 379 (468)
T TIGR00788 300 GSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARL 379 (468)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHh
Confidence 334455667788899999999999888776654321 1 13333445567889999999888888888888
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
. |++++|..++++.+..++|..+|+.+++.+.+..+ .+..+.++....+..+..++...+.+++|+
T Consensus 380 ~----------p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 380 C----------PSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred C----------CCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 7 88999999999999999999999998888876543 222333332222333334444444567887
No 201
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.30 E-value=3.3e-05 Score=73.97 Aligned_cols=172 Identities=12% Similarity=-0.008 Sum_probs=90.3
Q ss_pred chhHHHHHHHHHHHHHHHHhHHhhhhhh-cCCC-CchhHH-HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHH
Q 020422 27 TRDVHILSCAFLLIFLAYGAAQNLETTV-NTEG-NLGTIS-LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFV 103 (326)
Q Consensus 27 ~~~~~~l~l~~~~~~~~~~~~~~l~~~l-~~~~-~~g~~~-~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~ 103 (326)
.++.|++++.+++.|..|...+..-+.+ .... +..... ..+..+...+..+++|+++||+|+|+++.++.+...+..
T Consensus 251 ~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~ 330 (462)
T PRK15034 251 RLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFS 330 (462)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHH
Confidence 4567888888888888777665322222 2121 222111 112223456777899999999999999998887665554
Q ss_pred HH-h-hhh-----hhHHHHHH----HHHhhhhhHHHHhhhhHHHHHHhHh-hh----------hhcCCCcccchhhHHHH
Q 020422 104 AA-N-LFP-----SWYTMVPA----SLYLGFAASIIWVGEGTYLTAAALS-HA----------SNHKLHEGTVIGSFNGE 161 (326)
Q Consensus 104 ~~-~-~~~-----~~~~l~~~----r~l~G~g~g~~~~~~~~~l~~~~~~-~~----------~~~~~~~~~~rg~~~gi 161 (326)
.. . ..| +++...+. -+..|+|.|.. ...+.+++++ +. ..++...+++-|-..|+
T Consensus 331 ~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsv----fk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~ 406 (462)
T PRK15034 331 ALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGST----FQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGF 406 (462)
T ss_pred HHHHHHhccccccHHHHHHHHHHHHHHHhcccchHH----HHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHH
Confidence 32 1 222 33333222 23445555543 3344444421 00 00011112256778888
Q ss_pred HHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH
Q 020422 162 FWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT 207 (326)
Q Consensus 162 ~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~ 207 (326)
......+|..+-|.+-+...+..+ ++ ...|..+.+..++++
T Consensus 407 v~a~G~~Ggf~~p~~~g~~~~~~g----~~-~~~~~~~~~~~~~~~ 447 (462)
T PRK15034 407 ISAIGAVGGFFIPQAFGMSLNMTG----SP-VGAMKVFLIFYIVCV 447 (462)
T ss_pred HHHHHHcccchhhHHHHHHHHHcC----Cc-HHHHHHHHHHHHHHH
Confidence 877777777776754333333221 22 333555555554443
No 202
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.29 E-value=1.7e-05 Score=84.84 Aligned_cols=107 Identities=15% Similarity=-0.012 Sum_probs=79.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hh--------------------hhhHHHHHHHHHhhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LF--------------------PSWYTMVPASLYLGF 123 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~--------------------~~~~~l~~~r~l~G~ 123 (326)
.+...++..+++++.|++.|+.++++.+..+.++.+++.+.. +. ++.+.++++-++.|+
T Consensus 267 ~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (1140)
T PRK06814 267 LAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAA 346 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHH
Confidence 444555667778889999988887776666555444433211 11 555666677888999
Q ss_pred hhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 124 AASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 124 g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
+.+...+...+++.+.+ |+++||+++|+.....++|..+|+++.+.+.
T Consensus 347 ~~~~~~~~~~~~~~~~~----------p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 347 AGGLYIVPLFAALQAWA----------NPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred HHHHhHHHHHHHHHhhC----------CcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988887777777765 8999999999999999999999998877664
No 203
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.29 E-value=5.2e-05 Score=71.47 Aligned_cols=105 Identities=13% Similarity=-0.027 Sum_probs=73.1
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
+...++..+++++.+++.||+++|+++..+.. .++.... ...++++..+..-++.|++.+...+...+.+.+..
T Consensus 248 ~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~---- 322 (393)
T PRK11195 248 AVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNALLQHRG---- 322 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhC----
Confidence 33334556677888889999999988877753 3332222 23556665566677889998887766666555442
Q ss_pred hhcCCCcccc-hhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 145 SNHKLHEGTV-IGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 145 ~~~~~~~~~~-rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
|+++ +|+..++.+...+++..+|..+...+.
T Consensus 323 ------~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~ 354 (393)
T PRK11195 323 ------HVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV 354 (393)
T ss_pred ------cccccchhHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4444 799999999999999999988876553
No 204
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.28 E-value=0.0016 Score=62.61 Aligned_cols=148 Identities=9% Similarity=0.046 Sum_probs=86.3
Q ss_pred cccchhHHHHHHHHHHHHHHHHhHHhhhhhhcC---CCCchhHHHHHHHH--HHhhh-hhhHHHHHHHhchhhHHHHHhH
Q 020422 24 KNYTRDVHILSCAFLLIFLAYGAAQNLETTVNT---EGNLGTISLGILYT--SFTCF-SLVASLVVRVLGSKNALILGTT 97 (326)
Q Consensus 24 ~~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~---~~~~g~~~~~~~~~--~~~~~-~l~~g~l~d~~Grr~~l~~g~~ 97 (326)
+.+.|.++.+.+.+++....|...-.+.+.+.. +.+...+...-.+. ..++. .+.-+.+++|++|++.+-+-..
T Consensus 3 ~~E~~k~~~~~l~fF~il~~Y~iLR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~ 82 (472)
T TIGR00769 3 VHELKKFLPLFLMFFCILFNYTILRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVIS 82 (472)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHH
Confidence 355677888888888888888877777766654 23333433222211 11222 4567899999999999877665
Q ss_pred HHHHHHHHh---hhhh-----------------------------hHHHHHHHHHhhhhhHHHHh-hhhHHHHHHhHhhh
Q 020422 98 GYWLFVAAN---LFPS-----------------------------WYTMVPASLYLGFAASIIWV-GEGTYLTAAALSHA 144 (326)
Q Consensus 98 ~~~~~~~~~---~~~~-----------------------------~~~l~~~r~l~G~g~g~~~~-~~~~~l~~~~~~~~ 144 (326)
.+..+...+ +.|+ .|..-+..+..-+-.....+ .-.++..|+.
T Consensus 83 ~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~---- 158 (472)
T TIGR00769 83 PFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQIT---- 158 (472)
T ss_pred HHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 554433321 1221 11111111111111111111 1223444543
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.++|-.|..+++..+.++|..+|+.+...+.
T Consensus 159 ------t~~qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 159 ------TIDEAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred ------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778889999999999999999987766654
No 205
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.27 E-value=1.7e-05 Score=76.60 Aligned_cols=109 Identities=10% Similarity=-0.048 Sum_probs=74.7
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h-----hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L-----FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~-----~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
+..++.++.+++.||+|+|+++..+.++..+..... . .++.+.+++.-++.|++.+..++...++++|..|...
T Consensus 278 ~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e 357 (473)
T PRK10429 278 ANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGE 357 (473)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 445566788999999999999988776544333321 1 2345555666788999999999888889999874311
Q ss_pred hhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
.. .-.++.|..+|.......+|..+|+.+.+.+..
T Consensus 358 ~~---tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~ 392 (473)
T PRK10429 358 YK---LGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLG 392 (473)
T ss_pred Hh---cCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 011223557788777788889998888776653
No 206
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.26 E-value=0.0011 Score=62.28 Aligned_cols=218 Identities=17% Similarity=0.156 Sum_probs=125.6
Q ss_pred hhhhHHHHHHHhchhhHHHHHhHHHHH-HHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCccc
Q 020422 75 FSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT 153 (326)
Q Consensus 75 ~~l~~g~l~d~~Grr~~l~~g~~~~~~-~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 153 (326)
.-++...+.|.+|.|++++++.+...+ ..+..+.++...+-+.-+.-|++.+... +-.+|+=... |++
T Consensus 57 ~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~ev-ay~sYiys~v----------~~~ 125 (412)
T PF01770_consen 57 FLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAAEV-AYYSYIYSVV----------DKE 125 (412)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHHH-HHHHHheeec----------CHH
Confidence 345677899999999999998876543 3333356777766677788888877532 2223332222 666
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc----ccc-------
Q 020422 154 VIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEK------- 222 (326)
Q Consensus 154 ~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~----~~~------- 222 (326)
+--++.+.--++..+|-.+|.+++..+.... ..+-+.+ ..+..+...++.++.+++|.+++. +..
T Consensus 126 ~yq~vts~~raa~l~g~~~s~~lgQllvs~~---~~sy~~L-~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~ 201 (412)
T PF01770_consen 126 HYQKVTSYTRAATLVGRFISSLLGQLLVSFG---GVSYFQL-NYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDAN 201 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCCHHHH-HHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccc
Confidence 7778888877888888888888887665421 1223332 223344455667777888876531 100
Q ss_pred ----cc----cccc------ch-hhch----HHHHHHHHHHhhhcchhHHHHHH--HHHhhHHHHHhhhccccccc----
Q 020422 223 ----ET----ADAS------VN-FYSY----LVSLSKSITTLLADVRMLLIIPL--FAYSGLQQAFVWAEFTKEIV---- 277 (326)
Q Consensus 223 ----~~----~~~~------~~-~~~~----~~~~~~~~~~~~~~~~~~~l~~~--~~~~g~~~~~~~~~~~~~~~---- 277 (326)
+. .+.+ ++ .+.. .+...+++++..++|+++..... +..+|..+.. .|.+.+-
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~---nYvQ~LW~~v~ 278 (412)
T PF01770_consen 202 ESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVI---NYVQSLWDTVP 278 (412)
T ss_pred cccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHH---HHHHHHHHhcC
Confidence 00 0000 00 0111 12223455566778887765432 2334433322 2222221
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 278 TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 278 ~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
..+-.....|.+-+...+.++++++..|++..+
T Consensus 279 ~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~ 311 (412)
T PF01770_consen 279 PSDNESVYNGAVEAASTLLGAIAALLAGYVKVN 311 (412)
T ss_pred CCCCCcccchHHHHHHHHHHHHHHHHHhHhhcc
Confidence 112223356888888888888999999999444
No 207
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.25 E-value=9.1e-05 Score=69.47 Aligned_cols=98 Identities=9% Similarity=0.011 Sum_probs=54.8
Q ss_pred HHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 69 YTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 69 ~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
.....++.++.+++.||+|||+++..+.++..+..... ..++....+..-.+.+.|.+..++.. ...+..
T Consensus 249 ~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~------- 319 (392)
T PRK10473 249 AGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA--MSQALG------- 319 (392)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--HHHHhc-------
Confidence 33445667889999999999999998887666555443 33333332333344455544443332 112222
Q ss_pred CCCcccch-hhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 148 KLHEGTVI-GSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 148 ~~~~~~~r-g~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
|.++| |.+.++ ..++..+|+.+++.+..
T Consensus 320 ---~~~~~~g~~~~~----~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 320 ---PFSLRAGVASST----LGIAQVCGSSLWIWLAA 348 (392)
T ss_pred ---cCcccccHHHHH----HHHHHHHHHHHHHHHHH
Confidence 33344 444443 45666666666655543
No 208
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.25 E-value=0.00018 Score=67.84 Aligned_cols=99 Identities=12% Similarity=0.007 Sum_probs=67.4
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHH-HHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCC
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLF-VAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLH 150 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~-~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~ 150 (326)
.++.++.+++.||.+ |+.+..+..+..+. ... ...++.+.+++..++.|++.+...+...+++.+..
T Consensus 266 iig~~~~~~l~~r~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~---------- 334 (394)
T PRK10213 266 FVGTSLSSFILKRSV-KLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL---------- 334 (394)
T ss_pred HHHHHHHHHHHhccc-hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHC----------
Confidence 444567778888854 44444433333222 222 23456666667788999999888877777776653
Q ss_pred cccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 151 EGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 151 ~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
| +++++..++.....++|..+|+.+++.+.+.
T Consensus 335 ~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~ 366 (394)
T PRK10213 335 A-DQAEKAGSIQVAVIQLANTCGAAIGGYALDN 366 (394)
T ss_pred c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4 5677888888888899999999999888753
No 209
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.25 E-value=1.5e-05 Score=75.96 Aligned_cols=130 Identities=18% Similarity=0.247 Sum_probs=99.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHH-HHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHA 144 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~-~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~ 144 (326)
++.+.+=.+.-++.+.+.+|+|+-+++.+++.+... +......+|+|+.+..-+++|+.-+.+|.+..+|+++.+
T Consensus 413 a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~va---- 488 (618)
T KOG3762|consen 413 ALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVA---- 488 (618)
T ss_pred hhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhC----
Confidence 333443344456778999999999999999887766 444446789999889999999999999999999999998
Q ss_pred hhcCCCcccchhhHHHHHHHHH-HHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 145 SNHKLHEGTVIGSFNGEFWGMF-ASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 145 ~~~~~~~~~~rg~~~gi~~~~~-~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
||+-|..+.|++...+ .+|-.+|.+|++.+.... +-|+ .|..+++.+++..+++.
T Consensus 489 ------Pp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f-----g~~t-tf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 489 ------PPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF-----GART-TFRIFGIACLVTLALFI 544 (618)
T ss_pred ------CCcchHHHHHHHHHHhcccCcchhhhhhhhhheee-----hhHH-HHHHHHHHHHHHHHHHH
Confidence 8899999999988765 467788888888876543 4455 46666666655544443
No 210
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.22 E-value=2.1e-05 Score=74.62 Aligned_cols=107 Identities=5% Similarity=-0.301 Sum_probs=57.8
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHH-HHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNAL-ILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l-~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
+....+..++.++.|+++||++||+.. ....+..++..... ..++....+.+-.+.++|.....+.......
T Consensus 286 ~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------ 359 (412)
T TIGR02332 286 AIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPD------ 359 (412)
T ss_pred hHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcc------
Confidence 333445566778899999999977753 33322222221111 1222221111111222222111111111111
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+..|+++|+++.|+.+....+|.++||.+.+.+..
T Consensus 360 ----~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~ 394 (412)
T TIGR02332 360 ----QSISLQARAIAIAVINATGNIGSALSPFLIGILKD 394 (412)
T ss_pred ----cccchHHHHHHHHHHHHhhhhhhhhhhhhcccccc
Confidence 22488899999999999999999999988766654
No 211
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.22 E-value=6.6e-05 Score=72.22 Aligned_cols=137 Identities=15% Similarity=0.081 Sum_probs=68.3
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHH--------HHHhHHH--HHHHHHh-h-hhhhHHHHHHHHHhhhhhHHHHhhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNAL--------ILGTTGY--WLFVAAN-L-FPSWYTMVPASLYLGFAASIIWVGE 132 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l--------~~g~~~~--~~~~~~~-~-~~~~~~l~~~r~l~G~g~g~~~~~~ 132 (326)
.++.++...++.++.|+++||+++|+.. ..+.... ++...+. . ..+....+..-.+.|.+.+...+..
T Consensus 303 ~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 382 (465)
T TIGR00894 303 SSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGV 382 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhh
Confidence 4455666678889999999998765321 1111111 1111111 1 2222222222233333333333322
Q ss_pred hHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 020422 133 GTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (326)
Q Consensus 133 ~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~ 212 (326)
.....+. .++.+|...|+......+|..++|.+.+.+..... ..+|+. .|.+..+..+++.++..+
T Consensus 383 ~~~~~~~-----------~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~--~~~~~~-~f~~~~~~~~i~~i~~~~ 448 (465)
T TIGR00894 383 LINSLDL-----------APRFLGFIKGITGLPGFIGGLIASTLAGNILSQDS--KNVWLI-VFLIMAFVNILCVIFYLI 448 (465)
T ss_pred hhchhhc-----------ChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC--chHHHH-HHHHHHHHHHHHHHHeee
Confidence 2222222 34578999998888887777777766655433211 123544 355555555666555444
Q ss_pred ccC
Q 020422 213 LRK 215 (326)
Q Consensus 213 l~~ 215 (326)
+++
T Consensus 449 ~~~ 451 (465)
T TIGR00894 449 FGS 451 (465)
T ss_pred eec
Confidence 443
No 212
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.21 E-value=0.00013 Score=68.58 Aligned_cols=61 Identities=10% Similarity=0.089 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
+.+.++....+.|++.+...+...++..+.. |+++|...+++.....+|..+|+.+++.+.
T Consensus 298 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 298 NVWTLLVPAALFFFGAGMLFPLATSGAMEPF-----------PYLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-----------cccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 4455666778999999998888877776653 467899999999888999999988876653
No 213
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.19 E-value=0.0001 Score=70.22 Aligned_cols=150 Identities=15% Similarity=0.028 Sum_probs=94.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHhhhhhhc----CCCCchhHHHHHHHHHH-hhhhhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAAQNLETTVN----TEGNLGTISLGILYTSF-TCFSLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~----~~~~~g~~~~~~~~~~~-~~~~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
.-|++.++.+.+++.+.++...+.+..... .+.++-.......+.+. .++.++.+++++|+|+|+++.++.+++.
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~ 313 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLA 313 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHH
Confidence 345666666667777766665554433332 12222211122222333 3346788999999999999999999888
Q ss_pred HHHHHh-hhh--hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHH----HHHhHHHH
Q 020422 101 LFVAAN-LFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGM----FASHQFVG 173 (326)
Q Consensus 101 ~~~~~~-~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~----~~~g~~~G 173 (326)
+..+.. +.+ +....+++.++.++|.+..++-..+.++|..| |. +-+.--|..|+++++ .-+|.++|
T Consensus 314 i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD-yg------e~~TG~R~eGi~~s~~tF~~K~g~ala 386 (467)
T COG2211 314 VGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVD-YG------EWKTGVRREGIVYSGMTFFRKLGLALA 386 (467)
T ss_pred HHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhh-HH------HHHhCCCchhhHHHHHHHHHHHHHHHH
Confidence 877764 444 67788888899999999998888888888753 21 111112344444444 44667777
Q ss_pred HHHHHHHhc
Q 020422 174 NLITLAVLK 182 (326)
Q Consensus 174 ~li~~~l~~ 182 (326)
..+.+.+..
T Consensus 387 ~~~~g~~L~ 395 (467)
T COG2211 387 GFIPGWILG 395 (467)
T ss_pred HHHHHHHHH
Confidence 665555544
No 214
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.16 E-value=3.9e-05 Score=71.20 Aligned_cols=166 Identities=14% Similarity=0.092 Sum_probs=101.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhh-hcCCCCchhHH----HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETT-VNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGY 99 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~-l~~~~~~g~~~----~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~ 99 (326)
...||.|.+++.+...|.+|...+...+. ++.+.+.+... .+..-+.-++.-+.+|+++||+|.++++.......
T Consensus 215 ~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~ 294 (417)
T COG2223 215 FSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGM 294 (417)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHH
Confidence 34688999999999999988877643332 23233333222 12222233556688999999999999998877766
Q ss_pred HHHHHHh-hh-------hh----hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHH
Q 020422 100 WLFVAAN-LF-------PS----WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA 167 (326)
Q Consensus 100 ~~~~~~~-~~-------~~----~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~ 167 (326)
++..... +. ++ ....+...+..|+|.|.. ...+..+ .+++-|...|+......
T Consensus 295 ~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsv----fk~Ip~i-----------f~~~~G~v~G~vga~G~ 359 (417)
T COG2223 295 ALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSV----FKMIPVI-----------FPKETGAVTGIVGAIGG 359 (417)
T ss_pred HHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchh----eeechHH-----------HHhhhhHHHHHHHHhcc
Confidence 5555432 21 22 223455677788888764 3444444 34578899999888887
Q ss_pred HhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 020422 168 SHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILM 210 (326)
Q Consensus 168 ~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~ 210 (326)
+|..+=|..-+...+.. +-.+..|..+..+...+.++.
T Consensus 360 lGGf~lp~~~g~~~~~t-----g~~~~~f~~~~~~~~~a~v~~ 397 (417)
T COG2223 360 LGGFFLPLAFGVSLDLT-----GSYTGAFMLLLAFYLVALVLT 397 (417)
T ss_pred ccccchhHHHHHHHHhc-----ccHHHHHHHHHHHHHHHHHHH
Confidence 77655554444443332 222334656666666555543
No 215
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.16 E-value=2.7e-05 Score=71.17 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=86.6
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh---hhhhhH--HHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN---LFPSWY--TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~---~~~~~~--~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
..+.++.++++||+|||+++....++++++.... ..+|.. .+..+|++.- ..+.+...|--|++
T Consensus 395 fPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVy------- 463 (528)
T KOG0253|consen 395 FPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVY------- 463 (528)
T ss_pred CCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCccc-------
Confidence 3456789999999999999999999998888753 344543 3335566532 23344566777776
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccC
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRK 215 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~ 215 (326)
|...|+...|.-.++.-+|.++.|.++... +.+ ..+...++.++.+++.+...++|-
T Consensus 464 ---PTavRatgvGtcSsmaRIggI~~p~iA~~~--e~s------~sl~i~vy~~~~ilagIavcffPi 520 (528)
T KOG0253|consen 464 ---PTAVRATGVGTCSSMARIGGIFSPVIAMRA--ELS------TSLPIFVYGALFILAGIAVCFFPI 520 (528)
T ss_pred ---chhhhhcchhhhhhHHhhhhhhhhHHHHHh--ccc------eeehHHHHHHHHHHHHHHheeeee
Confidence 888999999998888899999999988222 211 123355778888888777777774
No 216
>PRK10133 L-fucose transporter; Provisional
Probab=98.13 E-value=0.00015 Score=69.39 Aligned_cols=105 Identities=8% Similarity=-0.177 Sum_probs=70.2
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
......++.++.++.+++.||+|||+++..+.++.+...... +.++... +..-.+.|++.+..+|...+...+.
T Consensus 301 ~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~glg~~~i~P~~~s~a~~~---- 375 (438)
T PRK10133 301 LTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVG-LIALTLCSAFMSIQYPTIFSLGIKN---- 375 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHHHHHHHHcc----
Confidence 455556667888999999999999999888776554433332 3444332 2345788999999999877666554
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
.+++.+.+.++... ...|..+++.+.+.+.+
T Consensus 376 -------~~~~~~~as~l~~~-~~~g~~~~~~i~G~l~~ 406 (438)
T PRK10133 376 -------LGQDTKYGSSFIVM-TIIGGGIVTPVMGFVSD 406 (438)
T ss_pred -------cchhhccchhHHhH-HhccchHHHHHHHHHHH
Confidence 33456777777753 33566666666555544
No 217
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.12 E-value=6.1e-05 Score=66.29 Aligned_cols=117 Identities=18% Similarity=0.079 Sum_probs=86.8
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhh--hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHh
Q 020422 64 SLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAA 140 (326)
Q Consensus 64 ~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~ 140 (326)
..+.......+++++.|.+.||+|||+.+..+...+....+. .+.+ +...++..|...|++.+..++....++.+..
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 123 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWF 123 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 355555666777789999999999998888877653333222 2333 4778888999999999999998889999886
Q ss_pred HhhhhhcCCCcc-cchhhHHHHHHH-HHHHhHHHHHHHHHHHhcCCCCCCCCchh
Q 020422 141 LSHASNHKLHEG-TVIGSFNGEFWG-MFASHQFVGNLITLAVLKDDKGGSTSGTT 193 (326)
Q Consensus 141 ~~~~~~~~~~~~-~~rg~~~gi~~~-~~~~g~~~G~li~~~l~~~~~~~~~~wr~ 193 (326)
|+ ++|+...+.... ....|..+++.++..+... ...+||.
T Consensus 124 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 165 (338)
T COG0477 124 ----------PEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA---LLWGWRA 165 (338)
T ss_pred ----------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcchHH
Confidence 44 578998888888 5777888888776655443 2356876
No 218
>PRK11462 putative transporter; Provisional
Probab=98.09 E-value=9.3e-05 Score=71.34 Aligned_cols=109 Identities=9% Similarity=-0.084 Sum_probs=63.8
Q ss_pred HHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhh--hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 71 SFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
...++.+++++++||+|+|+++..+..+.++.... .+.+ +...+++.-++.|++.+...+...+.++|..|-. +..
T Consensus 275 ~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~-e~~ 353 (460)
T PRK11462 275 GNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYG-EWC 353 (460)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhh-HHh
Confidence 33456678899999999999877555433332222 2222 2223333446678887776666667777775321 110
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
.-.++-|..++.......+|..+|+.+++.+..
T Consensus 354 --tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~ 386 (460)
T PRK11462 354 --NGKRLTGISFAGTLFVLKLGLAFGGALIGWMLA 386 (460)
T ss_pred --cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011222455566556677888888887766653
No 219
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.04 E-value=0.00018 Score=69.06 Aligned_cols=169 Identities=11% Similarity=0.062 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhhcCCCCch----hHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh
Q 020422 31 HILSCAFLLIFLAYGAAQNLETTVNTEGNLG----TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN 106 (326)
Q Consensus 31 ~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g----~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~ 106 (326)
+.+.+.+...+.+...+.....++..+.+.. .......-.+..++.++++.+.||+|||+.++.+..+..+....+
T Consensus 273 i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~ 352 (485)
T KOG0569|consen 273 IGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLM 352 (485)
T ss_pred HHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 3334444445555555555555555443322 222333334456677899999999999999999887765544322
Q ss_pred -----hhhh---hHH--HHHHHHH----hhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHH
Q 020422 107 -----LFPS---WYT--MVPASLY----LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFV 172 (326)
Q Consensus 107 -----~~~~---~~~--l~~~r~l----~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~ 172 (326)
+... |.. .+++-++ -++|-|+ ...-+.+|.. |++.|..++++-...+.+...+
T Consensus 353 ~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gp---i~~fi~aELf----------~~~~R~aa~s~~~~~~w~~~fi 419 (485)
T KOG0569|consen 353 SIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGP---IPWFIGAELF----------PQSARSAAQSVATAVNWLSNFI 419 (485)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCc---hhHHHHHHhC----------CccchHHHHHHHHHHHHHHHHH
Confidence 1111 111 1222222 2333332 2456778886 8889999888766655554443
Q ss_pred HHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHH-HHHHHHhccCCccc
Q 020422 173 GNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL-GTILMCFLRKEEDK 219 (326)
Q Consensus 173 G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l-~~il~~~l~~~~~~ 219 (326)
=+..-..+... .|- ..|+.|.+.+.+ .+.++..+||++.+
T Consensus 420 v~~~fp~l~~~-----~g~--~~filF~i~~~~~~i~~~~~lPETkgr 460 (485)
T KOG0569|consen 420 VGFAFPPLQNV-----IGP--YVFILFVIPLAIFLIYLYRYLPETKGR 460 (485)
T ss_pred HHHHHHHHHHH-----hcc--hhhHHHHHHHHHHHHHHHHhCcccCCC
Confidence 22222222221 122 236666666654 44556789998753
No 220
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.00 E-value=0.00049 Score=65.29 Aligned_cols=105 Identities=5% Similarity=-0.135 Sum_probs=71.7
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSH 143 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~ 143 (326)
.+.....+.++.+.++++.||+++|+++.+..++..+..+.. ..++...+ .+-++.|+..++.||+..+...+..
T Consensus 275 ~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~~-~~l~~~glf~s~~fp~i~sl~~~~~--- 350 (410)
T TIGR00885 275 NIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVGL-YCLTLCSAFMSLMFPTIYGIALKGL--- 350 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHHH-HHHHHHHHHHHHHHHHHHHHHHhhh---
Confidence 444556778899999999999999999887776655554443 44454443 3557889999999998777666654
Q ss_pred hhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 144 ASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 144 ~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+++ ...+.+... +..+|..++|.+.+.+..
T Consensus 351 -------g~~-~~~~s~~l~-~~~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 351 -------GQD-TKYGAAGLV-MAIIGGGIVPPLQGFIID 380 (410)
T ss_pred -------hhh-hhhhHHHHH-HHHhccchHHHHHHHHHH
Confidence 322 223233222 234888999988888765
No 221
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=97.98 E-value=0.0006 Score=66.00 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=54.8
Q ss_pred hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 109 PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 109 ~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
.|++.+++..++.|+|+....|...+++++.+ |++.||+.+|++.....+|..+|+.+....
T Consensus 379 ~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a----------P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~ 440 (475)
T TIGR00924 379 TSPWFMVLIYLFQTLGELMISPLGLSWWTKIA----------PQRLMGQMLGMWFLAQAMGSLLGGYLATFG 440 (475)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777888999999999999999999999987 889999999999988889888888776554
No 222
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=97.97 E-value=0.00013 Score=71.09 Aligned_cols=91 Identities=8% Similarity=-0.030 Sum_probs=67.5
Q ss_pred hHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhh---------hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 78 VASLVVRVLGSKNALILGTTGYWLFVAAN-LFPS---------WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 78 ~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~---------~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
..+++.||+++++.+.+|.++.++..... ..++ .+.+++..+++|+|+....|...+++.+.+
T Consensus 339 ~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~a------- 411 (500)
T PRK09584 339 IYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLV------- 411 (500)
T ss_pred HHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC-------
Confidence 33566666667777888887766654332 2222 345667899999999999999999998887
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHH
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~ 178 (326)
|++.||+.+|++.....+|..+++.+..
T Consensus 412 ---P~~~rg~~~g~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 412 ---PQRLMGFIMGSWFLTTAGAALIAGYVAN 439 (500)
T ss_pred ---cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999987777777777665543
No 223
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.95 E-value=0.00065 Score=59.76 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=63.5
Q ss_pred hhhHHHHHHHhchhhHHHHHhHHHHHHH-HHh------hh-hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 76 SLVASLVVRVLGSKNALILGTTGYWLFV-AAN------LF-PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 76 ~l~~g~l~d~~Grr~~l~~g~~~~~~~~-~~~------~~-~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
.++.|.+.|++|++.++.+|.+...+.- ... .. ++++.+.+.-.+.|.+.+..-+++.....++
T Consensus 53 G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~N-------- 124 (250)
T PF06813_consen 53 GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRN-------- 124 (250)
T ss_pred cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHh--------
Confidence 5889999999999999998887543322 111 11 3566666666777777665555544444455
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.|++||.+.|+.-....++..+=..+-..+.
T Consensus 125 ---FP~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 125 ---FPRSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred ---CccccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 3568999999998888877666544444443
No 224
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.92 E-value=0.0003 Score=65.57 Aligned_cols=169 Identities=12% Similarity=0.023 Sum_probs=95.4
Q ss_pred chhHHHHHHHHHHHHHHHHhHHhhhhhhc-CCCCchh----HHHHHHHHHHhhhhhhHHHHHHHh--chhhHHHHHh-HH
Q 020422 27 TRDVHILSCAFLLIFLAYGAAQNLETTVN-TEGNLGT----ISLGILYTSFTCFSLVASLVVRVL--GSKNALILGT-TG 98 (326)
Q Consensus 27 ~~~~~~l~l~~~~~~~~~~~~~~l~~~l~-~~~~~g~----~~~~~~~~~~~~~~l~~g~l~d~~--Grr~~l~~g~-~~ 98 (326)
-|.+|.++++.++++..+..+..-.+... +..+.+. .+.+++=.+--.+.+++|+++||+ |||....+.. ++
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 35688899999999988887764333222 2233332 333333344456778999999997 5666655433 32
Q ss_pred HHHHHHHh-hhh--hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHH-hHHHHH
Q 020422 99 YWLFVAAN-LFP--SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFAS-HQFVGN 174 (326)
Q Consensus 99 ~~~~~~~~-~~~--~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~-g~~~G~ 174 (326)
..+..+.. .+| |+.+...+-...|+..-+-.--.+....| ..|++.-|.+.|+......+ |.+.+.
T Consensus 331 i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e----------~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~ 400 (448)
T COG2271 331 ITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAE----------FVPKKAAGTATGFVGLFAYLIGAALAG 400 (448)
T ss_pred HHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhc----------cccHhhccchhchhhhHHHHhhHHhcC
Confidence 22232332 444 44666666666676654422222222333 34888889999987554444 444444
Q ss_pred HHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 175 LITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 175 li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
...+.+.+ ..+|-. .|+++.+.+++++++..
T Consensus 401 ~~~g~i~d-----~~gW~g-~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 401 LPLGYIAD-----TWGWDG-GFIVLSIAALLAILLLL 431 (448)
T ss_pred CcceeeEe-----cCCCcc-hHHHHHHHHHHHHHHHH
Confidence 43333322 257865 46666666666655443
No 225
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.90 E-value=0.00053 Score=66.16 Aligned_cols=185 Identities=16% Similarity=0.041 Sum_probs=106.7
Q ss_pred CccccchhHHHHHHHHHHHHHHHHhHH-----hhhhhh-cCCC------C----chhHHHHHHHHHHhhhhhhHHHHHHH
Q 020422 22 TPKNYTRDVHILSCAFLLIFLAYGAAQ-----NLETTV-NTEG------N----LGTISLGILYTSFTCFSLVASLVVRV 85 (326)
Q Consensus 22 ~~~~~~~~~~~l~l~~~~~~~~~~~~~-----~l~~~l-~~~~------~----~g~~~~~~~~~~~~~~~l~~g~l~d~ 85 (326)
+.++..|.++.+++..++...++.+.. .+.+++ +.++ + .|........+...+.+++.+++.+|
T Consensus 252 ~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~ 331 (477)
T TIGR01301 252 AFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRG 331 (477)
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677778888877666555544332 222222 2111 1 13333333333334667788999999
Q ss_pred hch-hhHHHHHhHHHHHHHHHh-hhhh---------------------hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 86 LGS-KNALILGTTGYWLFVAAN-LFPS---------------------WYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 86 ~Gr-r~~l~~g~~~~~~~~~~~-~~~~---------------------~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
+|+ |++...+.++.++..+.. +.++ -+..++.-.+.|+.-+.......+.+++..++
T Consensus 332 ~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 332 WGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred hccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 995 677688876665544432 2221 14444556788888888777777777776511
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCcc
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEED 218 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~ 218 (326)
..++.|..+|+++....+.+++..+..+.+....++ +... .+.+-++..+++.++ .+.+|++++
T Consensus 412 --------~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~---~~~~-~~~~~gv~~~~aa~~~~~~~~~~~~ 476 (477)
T TIGR01301 412 --------LGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG---GNLP-AFVVGAVAAFVSGLLALILLPRPRV 476 (477)
T ss_pred --------cCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC---CCee-HHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 134569999999999999988888766654433221 1122 233334444555444 456777643
No 226
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=97.82 E-value=0.00038 Score=67.82 Aligned_cols=171 Identities=14% Similarity=0.075 Sum_probs=110.0
Q ss_pred hHHHHHHHHHHHHHHHHhHHhhhhhhc----CCCCchhHHHHHHHHHHhhhhhhHHHHHHHhc--hhhHHHHHhHHHHHH
Q 020422 29 DVHILSCAFLLIFLAYGAAQNLETTVN----TEGNLGTISLGILYTSFTCFSLVASLVVRVLG--SKNALILGTTGYWLF 102 (326)
Q Consensus 29 ~~~~l~l~~~~~~~~~~~~~~l~~~l~----~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~G--rr~~l~~g~~~~~~~ 102 (326)
-.+.+.++..+...++.......++.. .+.......+++.-++-.++.+..|+++|+.. ++.+..++.++.++.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLA 378 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHH
Confidence 344555555555555554433333332 22222333355555566777889999999999 444445555555555
Q ss_pred HHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 103 VAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 103 ~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
.+.. +.+++..++...++.|+..|....-....+.++. ..++-..+.|+......++..+||.+++.+.
T Consensus 379 ~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~----------g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~ 448 (509)
T KOG2504|consen 379 RLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLV----------GLEKLSNAYGLLLLFQGIGALVGPPIAGLLY 448 (509)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------ChhhcchHHHHHHHHhHHHHHcCcccceeee
Confidence 5433 6788999999999999999988776655666665 7788899999999999999999999987554
Q ss_pred cCCCCCCCCchhHHHHHHHHHHHHHHHHHHhcc
Q 020422 182 KDDKGGSTSGTTLLFIVFLGVITLGTILMCFLR 214 (326)
Q Consensus 182 ~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~ 214 (326)
...+ ++... |.....+.+++.++.+..+
T Consensus 449 d~tg----~Y~~~-f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 449 DITG----NYDHA-FYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred eccC----Ceeee-hhhcChHHHHHHHHHHHhH
Confidence 3322 23222 3334444555555555555
No 227
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=97.60 E-value=0.0004 Score=64.13 Aligned_cols=87 Identities=11% Similarity=0.020 Sum_probs=51.7
Q ss_pred HHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-h--hh--hhHH----HHHHHHHhhhhhHHHHhhhhHHHHH
Q 020422 68 LYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-L--FP--SWYT----MVPASLYLGFAASIIWVGEGTYLTA 138 (326)
Q Consensus 68 ~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~--~~--~~~~----l~~~r~l~G~g~g~~~~~~~~~l~~ 138 (326)
......++.++.|++.||+|||+.+..+........... + .+ +... ++...+..|++.+..+ .++.+
T Consensus 270 ~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~~~ 345 (366)
T TIGR00886 270 GGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTF----ALVPH 345 (366)
T ss_pred HHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhh----hcchh
Confidence 333445677889999999999988777665443333221 1 21 3332 2333445555555444 34444
Q ss_pred HhHhhhhhcCCCcccchhhHHHHHHHHHHHh
Q 020422 139 AALSHASNHKLHEGTVIGSFNGEFWGMFASH 169 (326)
Q Consensus 139 ~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g 169 (326)
. .++++|+..|++....++|
T Consensus 346 ~-----------~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 346 I-----------FRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred h-----------chhhcccHHHHHHHhccCC
Confidence 4 3468999999887665544
No 228
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.57 E-value=0.087 Score=51.11 Aligned_cols=148 Identities=14% Similarity=0.115 Sum_probs=80.4
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCC-CCchhHHHHHHHHHHhhh---hhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTISLGILYTSFTCF---SLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~-~~~g~~~~~~~~~~~~~~---~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
.++|.++.+++.++++...|...-.+-+.+-.+ .+...+...=.+.+.-.+ -..-..+.++++|.+++-+..+.+.
T Consensus 21 ~E~~k~~~l~~m~f~i~f~y~~lR~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~ 100 (491)
T PF03219_consen 21 SELKKFLPLALMFFFILFNYTILRDLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFL 100 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 577888888888888877777666555544433 333333322223322222 2345789999999998876665544
Q ss_pred HHHHH--h-hhhh-------hH-HHHHHHHHhhhhh----HHHHhh------------------hhHHHHHHhHhhhhhc
Q 020422 101 LFVAA--N-LFPS-------WY-TMVPASLYLGFAA----SIIWVG------------------EGTYLTAAALSHASNH 147 (326)
Q Consensus 101 ~~~~~--~-~~~~-------~~-~l~~~r~l~G~g~----g~~~~~------------------~~~~l~~~~~~~~~~~ 147 (326)
.+.+. . +.|+ .. .-...+...|+.. ---|+. -.++..++
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~i-------- 172 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEI-------- 172 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------
Confidence 43322 1 2322 10 0000001111110 001111 11222333
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
.+.+|-.|..+++..+.++|.++++.+.....+
T Consensus 173 --tt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 173 --TTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred --CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367788899999999999999988777655554
No 229
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=97.57 E-value=0.0013 Score=63.98 Aligned_cols=98 Identities=17% Similarity=0.107 Sum_probs=73.7
Q ss_pred hhhhhhHHHHHHHhchhhH-------HHHHhHHHHHHHH-------Hhh----hhhhHHHHHHHHHhhhhhHHHHhhhhH
Q 020422 73 TCFSLVASLVVRVLGSKNA-------LILGTTGYWLFVA-------ANL----FPSWYTMVPASLYLGFAASIIWVGEGT 134 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~-------l~~g~~~~~~~~~-------~~~----~~~~~~l~~~r~l~G~g~g~~~~~~~~ 134 (326)
.+.+++.+++.||+|+|+. +.+|.++.++..+ ... ..+.+.++..-++.|+|++...+...+
T Consensus 323 ii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~ 402 (489)
T PRK10207 323 VVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLA 402 (489)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3566778899999999973 5566554433221 111 124555667889999999999998888
Q ss_pred HHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 135 YLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
++.+.+ |++.+|..+|+++...++|..+|..++...
T Consensus 403 ~~~~~a----------P~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 403 MIAALV----------PQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHhC----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888876 889999999999999999999988877544
No 230
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.53 E-value=0.0033 Score=57.96 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=42.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHHHHHhhhh--hhHHHHHH-----HhchhhHHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFTCFS--LVASLVVR-----VLGSKNALIL 94 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~~~~~~~~--l~~g~l~d-----~~Grr~~l~~ 94 (326)
...+++..+...++..-..+..+. ..+-+....+.+..+.+++-..+...+ +...+++| |+|||+..++
T Consensus 28 ~d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak~vSyt~~a~fS~ay~P~sLKllWaPiVDs~y~k~~GrrksWvv 103 (510)
T KOG3574|consen 28 GDRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAKGVSYTSQAIFSFAYWPFSLKLLWAPIVDSVYSKRFGRRKSWVV 103 (510)
T ss_pred hhhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCCCcchhhhhhhhhhhhHHHHHHHHHhhhHHHHHHhhccccceee
Confidence 455666666555555543333333 334444456777766666666555444 57788998 9999998654
No 231
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.48 E-value=0.0074 Score=59.01 Aligned_cols=129 Identities=15% Similarity=0.022 Sum_probs=84.9
Q ss_pred hhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhh--hh-HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCC
Q 020422 74 CFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFP--SW-YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (326)
Q Consensus 74 ~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~--~~-~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~ 149 (326)
.+....+...|++|||.....+..+..++.+.. ..+ .. ........+...+.+..+.....+.+|..
T Consensus 365 p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~--------- 435 (521)
T KOG0255|consen 365 PAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELI--------- 435 (521)
T ss_pred hHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---------
Confidence 334455789999999999999998776666543 322 22 12334456666666666666677778876
Q ss_pred CcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHH-HHhccCCccc
Q 020422 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDK 219 (326)
Q Consensus 150 ~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il-~~~l~~~~~~ 219 (326)
|...|+.+.+.......+|.++++.+....... +....+..+.....+..++ .+++||+...
T Consensus 436 -pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~lpet~~~ 498 (521)
T KOG0255|consen 436 -PTVVRNTAVGAISAAARLGSILAPLFPLLLRQM-------FPLLGLILFGWLALLLGLLSLLLLPETKGK 498 (521)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-------cccchHHHHHHHHHHHHHHHHhcCcccCCC
Confidence 888999999999988889988888876544331 1121222344444444434 4889997654
No 232
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.44 E-value=0.00025 Score=66.68 Aligned_cols=134 Identities=13% Similarity=0.051 Sum_probs=85.7
Q ss_pred hhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhh----hHHHHHHHHHhhhhhHHH-HhhhhHHHHHHhHhhhhhcC
Q 020422 75 FSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPS----WYTMVPASLYLGFAASII-WVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 75 ~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~----~~~l~~~r~l~G~g~g~~-~~~~~~~l~~~~~~~~~~~~ 148 (326)
+-++...++|+.|||++.+-|.+++.++... ....| -..+++...+..+....- -.+...+.+|++
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~F-------- 435 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIF-------- 435 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhc--------
Confidence 4456778999999999999999988776553 22222 223333333433333221 123455667776
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK 219 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~ 219 (326)
|..-||..-|+-.+..-.|.++|...-..+.++......+-|+ .++++.++.+++.+.-+++||++.+
T Consensus 436 --ParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~-v~~i~~~~~~~gi~~T~l~pEtk~~ 503 (538)
T KOG0252|consen 436 --PARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRN-VFIILAGCMLLGILFTLLIPETKGK 503 (538)
T ss_pred --hHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchH-HHHHHHHHHHHhHheeEEeeccccc
Confidence 8889999999988888888888865544443321111122333 4777888888888888889987653
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.38 E-value=0.036 Score=55.76 Aligned_cols=131 Identities=12% Similarity=0.033 Sum_probs=82.6
Q ss_pred hhhhhhHHHHHH-HhchhhHHHHHhHHHHHHHHHh-hh--h------hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 73 TCFSLVASLVVR-VLGSKNALILGTTGYWLFVAAN-LF--P------SWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 73 ~~~~l~~g~l~d-~~Grr~~l~~g~~~~~~~~~~~-~~--~------~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
-+.++++|.++| ++||+++++++.+++.+..+.. +. + .....+.+=++..+|.|+.=++..+...+-.++
T Consensus 37 yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~ 116 (654)
T TIGR00926 37 YLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEE 116 (654)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCc
Confidence 344567788886 5899999999988876654432 21 1 112234455778888888888877777776521
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCC--CCCCchhHHHHHHHHHHHHHHHHHH
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG--GSTSGTTLLFIVFLGVITLGTILMC 211 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~--~~~~wr~~~f~~~~~~~~l~~il~~ 211 (326)
..+++|.+.+.+++.+.++|+.+++.+...+...... ...+|.. .|.+.+++.+++.+++.
T Consensus 117 -------~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~-aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 117 -------RQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPL-AFGVPAILMILALIVFM 179 (654)
T ss_pred -------cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHH-HHHHHHHHHHHHHHHHH
Confidence 0233577889999999999999998887666432210 0135644 35555555555554443
No 234
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.30 E-value=1.7e-06 Score=82.78 Aligned_cols=132 Identities=17% Similarity=0.120 Sum_probs=72.7
Q ss_pred HhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-----hhh------hhHHHHHHHHHhhhhhHHHH-hhhhHHHHHH
Q 020422 72 FTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-----LFP------SWYTMVPASLYLGFAASIIW-VGEGTYLTAA 139 (326)
Q Consensus 72 ~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-----~~~------~~~~l~~~r~l~G~g~g~~~-~~~~~~l~~~ 139 (326)
..++.+.+..+.||+|||+.++.+..+.++..... ..+ ++..+... .+.....+..+ +....+..|.
T Consensus 299 ~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~l~~~~~~~g~~~~~~~~~~El 377 (451)
T PF00083_consen 299 NFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFL-ALFFAFFSLGWGPLPWIYTAEL 377 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccceee-eecccccccccccccccccccc
Confidence 34455667799999999999988877654433211 111 12222111 11212222112 2334666777
Q ss_pred hHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHH-HHHHhccCCcc
Q 020422 140 ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGT-ILMCFLRKEED 218 (326)
Q Consensus 140 ~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~-il~~~l~~~~~ 218 (326)
. |.+.|++..|+......++..+++.+...+.... ..+. .+.++.++.+++. +..+++||++.
T Consensus 378 f----------Pt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~----~~~~--~~~i~~~~~~i~~i~~~~~lpET~g 441 (451)
T PF00083_consen 378 F----------PTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL----GGWG--VFLIFAGVCLIAIIFVYFFLPETKG 441 (451)
T ss_pred c----------cccccccccccccccccccccccccccccccccc----cccc--cchhhHHHHHHHHhheeEEEeeCCC
Confidence 6 8899999999887666666666554433332211 0122 2555565555544 34577899876
Q ss_pred cc
Q 020422 219 KG 220 (326)
Q Consensus 219 ~~ 220 (326)
+.
T Consensus 442 ~~ 443 (451)
T PF00083_consen 442 KT 443 (451)
T ss_pred CC
Confidence 43
No 235
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.30 E-value=0.031 Score=51.45 Aligned_cols=115 Identities=13% Similarity=0.086 Sum_probs=75.9
Q ss_pred HHHHHHHHhhhhhhHHHHHHHhc-hhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 65 LGILYTSFTCFSLVASLVVRVLG-SKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 65 ~~~~~~~~~~~~l~~g~l~d~~G-rr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
.++.-......++..+.+++|.. +|+..+....++.+....+ +.|....+. .-++.|+|.|...+.+.+.+.+.+
T Consensus 249 lsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~l-w~~llG~G~G~~F~laL~li~~rs-- 325 (395)
T COG2807 249 LSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPIL-WALLLGLGQGGAFPLALTLILLRS-- 325 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHhCccchHHHHHHHHHHhhc--
Confidence 34444555667778888888655 5666565555555555544 555332222 248999999999998887777665
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchh
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 193 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~ 193 (326)
.++++-++-.|+-+....+=..+||.+.+.+-... .+|..
T Consensus 326 -------~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~----gsw~~ 365 (395)
T COG2807 326 -------SDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDAT----GSWSA 365 (395)
T ss_pred -------CChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhc----CChHH
Confidence 25666778888877666666677888877775432 46765
No 236
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.22 E-value=0.019 Score=54.47 Aligned_cols=63 Identities=11% Similarity=0.033 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
++...+..-++.|+|.+...+...+.. +.+ ++..+|++.+++......+...|+..++.+...
T Consensus 311 ~~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~---------~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 311 VWLWSVLGTSLYAFGIGLIFPTLFRFT--LFS---------NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred cHHHHHHHHHHHHHHHHHHhHHHHHHH--hcc---------CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 343345677888999988777654322 111 334579999998888877888888877766543
No 237
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.01 E-value=0.0083 Score=58.67 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHH
Q 020422 62 TISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVA 104 (326)
Q Consensus 62 ~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~ 104 (326)
.....+...+..++..++..+.||+|||+.++.|.+.+.+..+
T Consensus 332 ~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~ 374 (513)
T KOG0254|consen 332 FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLV 374 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHH
Confidence 3334444455566777789999999999999999987766544
No 238
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.00 E-value=0.019 Score=56.85 Aligned_cols=100 Identities=16% Similarity=0.071 Sum_probs=63.3
Q ss_pred HHhhhhhhHHHHHHHhchh-hHHHHHhHHHHHHHHHh--h-hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhh
Q 020422 71 SFTCFSLVASLVVRVLGSK-NALILGTTGYWLFVAAN--L-FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASN 146 (326)
Q Consensus 71 ~~~~~~l~~g~l~d~~Grr-~~l~~g~~~~~~~~~~~--~-~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~ 146 (326)
+..+++++.|.+..+++|- +.++.+.++..++..++ . .+|....+..-++.|++.|...........-.
T Consensus 361 g~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~------- 433 (599)
T PF06609_consen 361 GSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLI------- 433 (599)
T ss_pred HHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEee-------
Confidence 3455667788888887754 44456665555444333 2 23433444556788888876544333222222
Q ss_pred cCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 147 HKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 147 ~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
.|++..|.++|+..+...+|+.+|..+-..+
T Consensus 434 ---~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I 464 (599)
T PF06609_consen 434 ---VPDEDIGTATGLTGSIRSIGGSIGYAIYNAI 464 (599)
T ss_pred ---eCchHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3778899999999999999998887665443
No 239
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.93 E-value=0.022 Score=55.00 Aligned_cols=175 Identities=13% Similarity=0.134 Sum_probs=93.4
Q ss_pred ccCccccchhHHHHHHH--HHHHHHHHHhHH-----hhhhhhcCC-CCchhHHHHHHHHHHhhhhhhHHHHHHHhchh--
Q 020422 20 VLTPKNYTRDVHILSCA--FLLIFLAYGAAQ-----NLETTVNTE-GNLGTISLGILYTSFTCFSLVASLVVRVLGSK-- 89 (326)
Q Consensus 20 ~~~~~~~~~~~~~l~l~--~~~~~~~~~~~~-----~l~~~l~~~-~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr-- 89 (326)
+.||++..++.-+.++. .++-..++.... .+.+.++.+ .+.|.. .++-++...+..+++|.++||.-+|
T Consensus 248 ~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~-salP~l~~~~~k~~~g~lsD~l~~~~l 326 (466)
T KOG2532|consen 248 PVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFL-SALPFLAMAIVKFVAGQLSDRLTFRIL 326 (466)
T ss_pred CCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHH-HHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 45787655554444443 333333333222 333333334 223333 4677788888899999999999773
Q ss_pred ------hHH-HHHhHHHHHHHHHh-hhh---hhHHH---HHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccch
Q 020422 90 ------NAL-ILGTTGYWLFVAAN-LFP---SWYTM---VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVI 155 (326)
Q Consensus 90 ------~~l-~~g~~~~~~~~~~~-~~~---~~~~l---~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~r 155 (326)
+.+ .++..+-+++.++. +.+ .+..+ ..+-.+.|+..+++..+ ..+. .|+.-
T Consensus 327 s~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~-----------apq~a 391 (466)
T KOG2532|consen 327 SETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKN----HQDI-----------APQHA 391 (466)
T ss_pred chHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhh----hhhc-----------cchHH
Confidence 111 12223333333322 222 21111 12223333333332221 1111 34566
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhc
Q 020422 156 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFL 213 (326)
Q Consensus 156 g~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l 213 (326)
+..+|+.+....+..+++|.+.+.+.++. ....|+. .|.+.+++.+++.+++.++
T Consensus 392 ~~l~g~~~~~~~~~~~~~P~~vg~~~~~~--t~~eW~~-VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 392 GFVMGIINFVGALAGFIAPLLVGIIVTDN--TREEWRI-VFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeeEeCCC--CHHHHHH-HHHHHHHHHHHhchheeEe
Confidence 88999999999999999998887776521 2357877 4666666666666555544
No 240
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.87 E-value=0.038 Score=51.99 Aligned_cols=64 Identities=13% Similarity=0.079 Sum_probs=50.8
Q ss_pred hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 107 LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 107 ~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
+.|+.+.+++.-+..|+-.|..+......+.+- .++++|..++|....+-+.|..++++++..+
T Consensus 331 fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~----------~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 331 FIPSIWIVFVLIFYEGLLGGASYVNTFYRISEE----------VPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhc----------CCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 467888777777899999999888766555443 2788999999999888888888888887554
No 241
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.81 E-value=0.011 Score=55.06 Aligned_cols=109 Identities=13% Similarity=-0.012 Sum_probs=75.6
Q ss_pred HHHhhhhhhHHHHHHHhc--hhhHHHH-HhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhh
Q 020422 70 TSFTCFSLVASLVVRVLG--SKNALIL-GTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHAS 145 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~G--rr~~l~~-g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~ 145 (326)
+.++++..+.|.+.||++ | |.+.. +.+..+...... +.+++..+++-+...|++.+..-.+-.-.+....|.+.
T Consensus 317 ~~y~ig~~lfg~la~k~~~~~-wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh- 394 (464)
T KOG3764|consen 317 LSYAIGTNLFGKLADKYPHLR-WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRH- 394 (464)
T ss_pred cchhccCchHHHHHHhcCchh-HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhh-
Confidence 456788899999999999 5 44333 444444333333 67889999988888888888766553333333332211
Q ss_pred hcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 146 NHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 146 ~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
....+.-|...+++..++.+|..+||.+++.+.+.
T Consensus 395 ---~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~ 429 (464)
T KOG3764|consen 395 ---VSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEA 429 (464)
T ss_pred ---ccccceeeeHHHHHHHHHHHhhhccccccchheee
Confidence 11222568899999999999999999999888764
No 242
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=96.34 E-value=0.024 Score=52.96 Aligned_cols=110 Identities=12% Similarity=0.001 Sum_probs=75.0
Q ss_pred hHHHHHhHHHHHHHHHh----hhhh------hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHH
Q 020422 90 NALILGTTGYWLFVAAN----LFPS------WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFN 159 (326)
Q Consensus 90 ~~l~~g~~~~~~~~~~~----~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~ 159 (326)
|++++|.+++.++.+.. ..++ ...++++-.+.++|.|++=++...+.+|-++++ .+++|.+.+
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~-------~~~~~~~~F 74 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDED-------DDSRRDSFF 74 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTT-------TTTHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhccc-------chhhhhhhH
Confidence 45666777666655441 1112 246777788999999999999888888887542 257888999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHh
Q 020422 160 GEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF 212 (326)
Q Consensus 160 gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~ 212 (326)
.+|+.+.++|..++..+...+.++ .+|.. .|.+..+..+++.+.+..
T Consensus 75 ~~fY~~in~G~~~~~~~~~~i~~~-----~~~~~-~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 75 NWFYWGINIGSLFSPTLVPYIQQN-----YGWFL-GFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHC-----S-HHH-HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhhhhHhhcccchhhccc-----cchhh-hhhHHHHHHHHHHHHHHh
Confidence 999999999999998887777543 46654 355544445555554443
No 243
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.22 E-value=0.026 Score=40.10 Aligned_cols=42 Identities=12% Similarity=-0.011 Sum_probs=33.8
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 278 TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 278 ~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
+.+++..++|.+..+..+...+++.+.|.++|| |++.+..+.
T Consensus 29 ~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~ 72 (77)
T PF12832_consen 29 QLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGS 72 (77)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHH
Confidence 456777899999999999999999999999999 444444433
No 244
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.22 E-value=0.14 Score=48.56 Aligned_cols=95 Identities=15% Similarity=0.086 Sum_probs=51.2
Q ss_pred hhhhhHHHHHH----HhchhhHHHHHhHHH---HHHHHHhhh-------h--hh-------HHHHHHHHHhhhhhHHHHh
Q 020422 74 CFSLVASLVVR----VLGSKNALILGTTGY---WLFVAANLF-------P--SW-------YTMVPASLYLGFAASIIWV 130 (326)
Q Consensus 74 ~~~l~~g~l~d----~~Grr~~l~~g~~~~---~~~~~~~~~-------~--~~-------~~l~~~r~l~G~g~g~~~~ 130 (326)
+.|++.|..+| |+||||.++...... +++.+.+.+ + .. ...++.=.+.=++.-....
T Consensus 82 ~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qg 161 (498)
T KOG0637|consen 82 LVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQG 161 (498)
T ss_pred eecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhh
Confidence 34677787776 689999887655432 222221111 1 11 1222222233334434455
Q ss_pred hhhHHHHHHhHhhhhhcCCCcccchhh-HHHHHHHHHHHhHHHHHHHHH
Q 020422 131 GEGTYLTAAALSHASNHKLHEGTVIGS-FNGEFWGMFASHQFVGNLITL 178 (326)
Q Consensus 131 ~~~~~l~~~~~~~~~~~~~~~~~~rg~-~~gi~~~~~~~g~~~G~li~~ 178 (326)
.+-++++|.. .++++-+ +.+.+.....+|..+|-..+.
T Consensus 162 p~ra~L~Dl~----------~~d~~~~~Ans~f~~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 162 PCRALLADLA----------RGDAKKTRANSVFSFFMAVGNVLGYALGS 200 (498)
T ss_pred hHHHHHHHhc----------cChhhhhccchhHHHHHHhcceeeeeccc
Confidence 5667777765 3333333 888887777777777766554
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=96.21 E-value=0.15 Score=47.86 Aligned_cols=94 Identities=23% Similarity=0.254 Sum_probs=68.3
Q ss_pred hHHHH-HHHhchhhHHHHHhHHHHHHHH----HhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcc
Q 020422 78 VASLV-VRVLGSKNALILGTTGYWLFVA----ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEG 152 (326)
Q Consensus 78 ~~g~l-~d~~Grr~~l~~g~~~~~~~~~----~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~ 152 (326)
..+.+ .+|.++|+.-.+|..+..+... +....+.+.+...-++.|++.|.+..+..+.+.+.. .+
T Consensus 263 ~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt----------~~ 332 (403)
T PF03209_consen 263 LAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLT----------SA 332 (403)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCC----------CC
Confidence 34444 4578888777666654433222 223456777777889999999999988888887776 67
Q ss_pred cchhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 153 TVIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 153 ~~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
++-|.++|.+-.....+..+|..+++.+.
T Consensus 333 ~~aG~~mG~WGaaQA~A~Glg~~~GG~~~ 361 (403)
T PF03209_consen 333 GRAGLFMGAWGAAQAIARGLGTFLGGALR 361 (403)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78899999998888888888887777654
No 246
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.72 E-value=0.097 Score=37.14 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhcCCCCchhHH----HHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHH
Q 020422 33 LSCAFLLIFLAYGAAQNLETTVNTEGNLGTIS----LGILYTSFTCFSLVASLVVRVLGSKNALILGTTG 98 (326)
Q Consensus 33 l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~----~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~ 98 (326)
+...+++.|.+........+....+.+.+... .++..++-.+++++.|.++||+|+++.++.....
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 44445555666555443333332233333322 3444455567788999999999999998876644
No 247
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=95.55 E-value=0.58 Score=43.87 Aligned_cols=145 Identities=13% Similarity=0.062 Sum_probs=87.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhH-----HhhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAA-----QNLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~-----~~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
..|++..-+++.+++-..=..+ +.+.+....+.+++....+..+..+.++-+.+.++.+|+.+.+.+....++-.
T Consensus 234 ~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~i 313 (422)
T COG0738 234 QNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAI 313 (422)
T ss_pred hChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4455555555555543222222 22222222233444445677778888888888899999999999988665433
Q ss_pred H-HHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHH
Q 020422 101 L-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLA 179 (326)
Q Consensus 101 ~-~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~ 179 (326)
+ .....+.++...++ +-.+.|+..++.||+..+.-.+.. + ++-....++. ...-.|.++-|.+.+.
T Consensus 314 ll~~~~~l~~g~v~~~-~l~~ig~F~simfPTIfslal~~l----------~-~~ts~~s~~l-~maivGGAiiP~l~G~ 380 (422)
T COG0738 314 LLLLAVALIGGVVALY-ALFLIGLFNSIMFPTIFSLALKNL----------G-EHTSVGSGLL-VMAIVGGAIIPPLQGV 380 (422)
T ss_pred HHHHHHHHhcChHHHH-HHHHHHHHhHHHHHHHHHHHHhcc----------C-ccccccceee-eeheecchHHHHHHHH
Confidence 3 33334677766665 458899999999999887776664 3 2223333322 2334566666666666
Q ss_pred HhcC
Q 020422 180 VLKD 183 (326)
Q Consensus 180 l~~~ 183 (326)
+.+.
T Consensus 381 i~d~ 384 (422)
T COG0738 381 IADM 384 (422)
T ss_pred HHHh
Confidence 6543
No 248
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.48 E-value=0.2 Score=48.75 Aligned_cols=35 Identities=9% Similarity=-0.071 Sum_probs=26.4
Q ss_pred HHHHhhhhhhHHHHHHH----hchhhHHHHHhHHHHHHH
Q 020422 69 YTSFTCFSLVASLVVRV----LGSKNALILGTTGYWLFV 103 (326)
Q Consensus 69 ~~~~~~~~l~~g~l~d~----~Grr~~l~~g~~~~~~~~ 103 (326)
.+.-.++.+.+|+++|| ..+|........++....
T Consensus 319 ~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g 357 (495)
T KOG2533|consen 319 DVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIG 357 (495)
T ss_pred HhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 34446667889999999 778888888777776554
No 249
>PRK03612 spermidine synthase; Provisional
Probab=95.15 E-value=2.6 Score=41.37 Aligned_cols=29 Identities=17% Similarity=0.044 Sum_probs=23.3
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 154 VIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 154 ~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
+-|+..|-.+..+.+|.++|.++.+++.-
T Consensus 142 ~~g~~~g~ly~~ntlGa~~G~l~~~~vLl 170 (521)
T PRK03612 142 HLGHNVATVLAADYLGALVGGLAFPFLLL 170 (521)
T ss_pred chhhhhhhhHhHHhHHHHHHHHHHHHHHH
Confidence 45778888899999999999988766543
No 250
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=94.84 E-value=0.98 Score=41.64 Aligned_cols=227 Identities=19% Similarity=0.207 Sum_probs=115.9
Q ss_pred HHHHHHhchhhHHHHHhH-HHHHHHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhH
Q 020422 80 SLVVRVLGSKNALILGTT-GYWLFVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSF 158 (326)
Q Consensus 80 g~l~d~~Grr~~l~~g~~-~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~ 158 (326)
=.+.|..-.|++++.-.+ ...++.+..+.++.+.+=+.-+.-|...+. ..+|-+.++.+ .+|+++-++
T Consensus 63 FlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAa----EIAYysYIYs~-------Vd~~~Yqrv 131 (433)
T KOG3810|consen 63 FLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAA----EIAYYSYIYSK-------VDPEMYKRV 131 (433)
T ss_pred HHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHH----HHhhhheeeee-------cCHHHHHHH
Confidence 367899999999887443 233343333445544333334455554443 33444444322 377888898
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHHHHHHHHHhccCCccc----ccccc---ccccch-
Q 020422 159 NGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKET---ADASVN- 230 (326)
Q Consensus 159 ~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~~----~~~~~---~~~~~~- 230 (326)
.|---+..-.|-..|..++..+.... +.+-.++-+ +..+...++.++.+++|.++++ +.+++ .+.++.
T Consensus 132 t~y~RaA~L~g~~~g~vlaQlLvs~~---~~sy~~LN~-ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~~~e~~~ 207 (433)
T KOG3810|consen 132 TGYCRAAFLVGKFVGSVLAQLLVSLE---TLSYTTLNY-ISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVGDLEEMN 207 (433)
T ss_pred HHHhHHHHHHHhHHHhHHHHHHhhhc---ccchhhhch-hhHHHHHHHHHHHhhCCCCchhhhhhcccccceeccchhcC
Confidence 88777777777777777776654321 112222212 2344445666778899987642 11111 000110
Q ss_pred -h--hch-----HHHHHHHHHHhhhcchhHHHHHH--HHHhhHHHHHhhhccccccccccc-Cc--chHHHHHHHHHHHH
Q 020422 231 -F--YSY-----LVSLSKSITTLLADVRMLLIIPL--FAYSGLQQAFVWAEFTKEIVTPAL-GV--SGVGGAMAVYGAFD 297 (326)
Q Consensus 231 -~--~~~-----~~~~~~~~~~~~~~~~~~~l~~~--~~~~g~~~~~~~~~~~~~~~~~~~-~~--~~~g~~~~~~gi~~ 297 (326)
+ ..+ +....+++....++|+++..... +..+|..+.. .|++.+-.+.. .+ -..|.+=++..+.+
T Consensus 208 ~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~---nY~Q~LW~~~~~~~~~vyNG~veAv~tlLG 284 (433)
T KOG3810|consen 208 PQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVT---NYTQILWKEVAPNPANVYNGAVEAVSTLLG 284 (433)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHH---HHHHHHHHhhCCCchhhhcCHHHHHHHHHH
Confidence 0 011 11122344556778887764432 2234443332 33333211110 11 13455555556666
Q ss_pred HHHHHHhhhhhhh----hhhHHhHHHHHhhc
Q 020422 298 AISLLGFATFFSV----HSLLVGLPLVFHLS 324 (326)
Q Consensus 298 ~~g~~~~G~l~Dr----R~~~~~~g~~~~~~ 324 (326)
+++.+..|.+--. +..++.+|++..+-
T Consensus 285 a~~~~~~g~l~i~w~r~g~~ll~~~s~~~ag 315 (433)
T KOG3810|consen 285 AIAALAAGYLNINWNRWGDLLLAVGSAVQAG 315 (433)
T ss_pred HHHHHHHHheeeccchhhHHHHHHHHHHhhh
Confidence 7888888888654 34666666665543
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=94.74 E-value=4.1 Score=38.98 Aligned_cols=36 Identities=8% Similarity=0.051 Sum_probs=28.8
Q ss_pred cccccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh
Q 020422 275 EIVTPALGVSGVGGAMAVYGAFDAISLLGFATFFSV 310 (326)
Q Consensus 275 ~~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr 310 (326)
+..+++.+...+|..-....+.+..|+....++.+|
T Consensus 284 yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~r 319 (432)
T PF06963_consen 284 YLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKR 319 (432)
T ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456777788888888888888899999999888
No 252
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=94.08 E-value=3.5 Score=40.19 Aligned_cols=61 Identities=21% Similarity=0.152 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHH-HHHhHHHHHHHHHHH
Q 020422 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGM-FASHQFVGNLITLAV 180 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~-~~~g~~~G~li~~~l 180 (326)
+.+.++.+.+++++|+-...|...+.+++.+ |++-||+.+|.++.. ..+|..+++.++...
T Consensus 376 s~~wl~~~~~~~t~gEl~~sPvgls~~~~la----------P~~~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 376 SLPLMVLGLAVMGFAELFIDPVAMSQITRIE----------IPGVTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred CHHHHHHHHHHHHHHHHHHChHHHHHHHHhC----------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444667889999999999999999999987 888999999998763 357777766665544
No 253
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=94.00 E-value=0.95 Score=43.70 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=71.2
Q ss_pred HHHhhhhhh-HHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhc
Q 020422 70 TSFTCFSLV-ASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNH 147 (326)
Q Consensus 70 ~~~~~~~l~-~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~ 147 (326)
....+++++ .+.+...+|-|+++..|+..-.+..... ++++.++.+..+++.++... ..++..+.++.+.
T Consensus 288 ~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~~-~~pa~~s~~s~~v------- 359 (463)
T KOG2816|consen 288 ILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAGI-VFPAIRAFASILV------- 359 (463)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhcc-hhHHHHhHHHhhc-------
Confidence 344556655 4588999999998777776554444443 66777777766666665554 4555666676665
Q ss_pred CCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 148 KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 148 ~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
.++++|+++++....-.+...+++.+=..+
T Consensus 360 ---~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 360 ---SPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred ---ccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 889999999999999988888887765444
No 254
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=93.89 E-value=4.3 Score=38.37 Aligned_cols=92 Identities=11% Similarity=-0.002 Sum_probs=46.0
Q ss_pred hhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCccc
Q 020422 75 FSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGT 153 (326)
Q Consensus 75 ~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 153 (326)
..+.++++.+|...+.=+....++..+..+. .+++|.+.=+++-++.+++.|.--..-.++.. .+ ++
T Consensus 75 ~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y----------~~- 142 (402)
T PF02487_consen 75 VKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FY----------GK- 142 (402)
T ss_pred HHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hc----------Cc-
Confidence 3467888899887443333333333333222 24566654445555666666653333222221 11 22
Q ss_pred chhhHHHHHHHHHHHhHHHHHHHHHHHh
Q 020422 154 VIGSFNGEFWGMFASHQFVGNLITLAVL 181 (326)
Q Consensus 154 ~rg~~~gi~~~~~~~g~~~G~li~~~l~ 181 (326)
...+-+.++...++.+|++.-..+.
T Consensus 143 ---~~l~~wssGTG~aGl~Ga~~y~~lT 167 (402)
T PF02487_consen 143 ---SSLSAWSSGTGGAGLVGALYYLGLT 167 (402)
T ss_pred ---cccccccCCcChhhHHHHHHHHHHH
Confidence 2345455556666777766544443
No 255
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=93.65 E-value=2.6 Score=39.48 Aligned_cols=101 Identities=14% Similarity=0.113 Sum_probs=61.6
Q ss_pred hhhhhhHHHHHHHhc--hhhHHHHHhHHHHH-HHHHhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCC
Q 020422 73 TCFSLVASLVVRVLG--SKNALILGTTGYWL-FVAANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (326)
Q Consensus 73 ~~~~l~~g~l~d~~G--rr~~l~~g~~~~~~-~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~ 149 (326)
.+.+....+..||.. -+-.+..++.+..- +......+....++.+-.+--+..+...++....+.. +
T Consensus 311 ~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~----------~ 380 (451)
T KOG2615|consen 311 LVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSLVHK----------Y 380 (451)
T ss_pred HHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHHHHh----------c
Confidence 444555556666666 55555554433211 1112234444555555555555555444443333333 3
Q ss_pred CcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcC
Q 020422 150 HEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD 183 (326)
Q Consensus 150 ~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~ 183 (326)
.|+++||...|++.+...++-++||++++.+..+
T Consensus 381 ~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 381 GPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred CCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 4999999999999999999999999999777654
No 256
>PTZ00207 hypothetical protein; Provisional
Probab=93.13 E-value=2.9 Score=41.69 Aligned_cols=90 Identities=12% Similarity=0.010 Sum_probs=54.4
Q ss_pred HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHH-HHHHHHhcC-C-CCCC
Q 020422 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN-LITLAVLKD-D-KGGS 188 (326)
Q Consensus 112 ~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~-li~~~l~~~-~-~~~~ 188 (326)
..|++.-++.|++.|..|+......+|.+ - ++-|+...+......+|+.+=+ .+.+.+... . ..++
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selF----------g-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~ 521 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIF----------A-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQ 521 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHh----------c-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 57888899999999999999999999986 3 5666665555444444444421 222222211 1 0000
Q ss_pred ---CC---chhHHHHHHHHHHHHHHHHHHhc
Q 020422 189 ---TS---GTTLLFIVFLGVITLGTILMCFL 213 (326)
Q Consensus 189 ---~~---wr~~~f~~~~~~~~l~~il~~~l 213 (326)
.| -| ..|++.+++++++.+....+
T Consensus 522 ~~C~G~~C~~-~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 522 DVCTERVCVV-MPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred CeeCCceeeH-hHHHHHHHHHHHHHHHHhhe
Confidence 01 12 34777788888877765443
No 257
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=93.11 E-value=1.8 Score=41.51 Aligned_cols=129 Identities=10% Similarity=0.014 Sum_probs=76.1
Q ss_pred HHHHHHhchhhHHHHHhHHHHHHHHHh--hh---------hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcC
Q 020422 80 SLVVRVLGSKNALILGTTGYWLFVAAN--LF---------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHK 148 (326)
Q Consensus 80 g~l~d~~Grr~~l~~g~~~~~~~~~~~--~~---------~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~ 148 (326)
.....+..-|+++.++.++..+..+.. +. ++.+..+.--++..+-...-+-......++++
T Consensus 276 ~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lc-------- 347 (433)
T PF03092_consen 276 RKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLC-------- 347 (433)
T ss_pred HHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHC--------
Confidence 344455566777777666555444331 11 12222233445666666666666666777876
Q ss_pred CCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCchhHHHHHHHHHHHHHHHHHHhccCCcc
Q 020422 149 LHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGTTLLFIVFLGVITLGTILMCFLRKEED 218 (326)
Q Consensus 149 ~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~--~~~~~wr~~~f~~~~~~~~l~~il~~~l~~~~~ 218 (326)
|+..-|...+++.+..++|..++..++..+.+..+ .+..+.-+...++..++.++...+..++|+.++
T Consensus 348 --P~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 348 --PKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHHcCCCch
Confidence 77888999999999999999999888887766443 111111111223333444455555567777544
No 258
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=92.88 E-value=0.61 Score=43.06 Aligned_cols=47 Identities=9% Similarity=-0.194 Sum_probs=38.4
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhhc
Q 020422 278 TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHLS 324 (326)
Q Consensus 278 ~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~~ 324 (326)
.++++.++++..+......+++...+.|.++|| ||+..+.-.++|.+
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~ 111 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSL 111 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence 457777789988888888889999999999999 88777776666643
No 259
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=92.61 E-value=3.3 Score=39.97 Aligned_cols=59 Identities=15% Similarity=0.068 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHH
Q 020422 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~ 178 (326)
+.+.+++..+++++|+=.+.|...++++..+ |+.-.++.++++......|+.++.-++.
T Consensus 393 s~~~lil~y~l~s~gEL~iSpvGLs~~t~la----------P~~~~s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 393 SVWWLVLSYVLQSFGELFISPVGLSMVTKLA----------PPALKSFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred CHHHHHHHHHHHHHHHHHhCHHHHHHHHHhC----------hHHHHHHHHHHHHHHHHHHHHhhceecc
Confidence 4566778899999999999998888998887 7788899999998888888887766654
No 260
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=91.50 E-value=13 Score=35.20 Aligned_cols=29 Identities=17% Similarity=0.026 Sum_probs=21.0
Q ss_pred HHHHHHH-HHHHHHHHHHHhhhhhhh-hhhH
Q 020422 286 VGGAMAV-YGAFDAISLLGFATFFSV-HSLL 314 (326)
Q Consensus 286 ~g~~~~~-~gi~~~~g~~~~G~l~Dr-R~~~ 314 (326)
.-..... +.+...+|.....++-++ ||.+
T Consensus 284 ~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l 314 (406)
T KOG1479|consen 284 ALLLVFLSFNVFDLIGSILAALLTWPDPRKL 314 (406)
T ss_pred HHHHHHHHhHHHHHhhhhhhhcccCCCCcee
Confidence 4444555 899999998888888887 5443
No 261
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=91.34 E-value=0.85 Score=43.45 Aligned_cols=82 Identities=17% Similarity=0.194 Sum_probs=57.7
Q ss_pred CchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH-hhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHH
Q 020422 59 NLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA-NLFPSWYTMVPASLYLGFAASIIWVGEGTYLT 137 (326)
Q Consensus 59 ~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~-~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~ 137 (326)
.+|.+.+.+.-...++.++...++.||+|-|+.+..+...+.+.+.. .+.++.+....-|...|+-.++......+.++
T Consensus 332 ~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~ 411 (498)
T KOG0637|consen 332 RMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALA 411 (498)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHH
Confidence 45666676766777888999999999999777777766656665544 36677666667788888766666555555555
Q ss_pred HHh
Q 020422 138 AAA 140 (326)
Q Consensus 138 ~~~ 140 (326)
...
T Consensus 412 ~y~ 414 (498)
T KOG0637|consen 412 LYA 414 (498)
T ss_pred HHH
Confidence 543
No 262
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=90.93 E-value=1.4 Score=31.90 Aligned_cols=64 Identities=19% Similarity=0.057 Sum_probs=45.9
Q ss_pred hhhhhhcCCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHh-hhhhhH
Q 020422 49 NLETTVNTEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAAN-LFPSWY 112 (326)
Q Consensus 49 ~l~~~l~~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~-~~~~~~ 112 (326)
.++++...+.+.+.+-.+.-|++|-++++....+.++..+++.+..+.+...+.++.+ +.++..
T Consensus 17 ~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~ 81 (85)
T PF06779_consen 17 LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFW 81 (85)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 3444444444444444678889999999999999999888888888888777766654 555544
No 263
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.61 E-value=3.3 Score=39.71 Aligned_cols=59 Identities=7% Similarity=-0.012 Sum_probs=39.0
Q ss_pred HHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHH
Q 020422 112 YTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAV 180 (326)
Q Consensus 112 ~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l 180 (326)
+..++.-++.|+..|-+.+.+..|..+. .+++||..+-.+......+|...|..++..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~----------v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~ 431 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQ----------VDPHEREVAGALMVIFLLVGLALGAVLSFLF 431 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334456888998887655544433332 2567888887777777778888887776444
No 264
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=90.51 E-value=10 Score=37.75 Aligned_cols=125 Identities=14% Similarity=0.094 Sum_probs=69.4
Q ss_pred hhhhhHHHHHHHh-chhhHHHHHhHHHHHHHHH-----hh---hh---------------h---hHHHHHHHHHhhhhhH
Q 020422 74 CFSLVASLVVRVL-GSKNALILGTTGYWLFVAA-----NL---FP---------------S---WYTMVPASLYLGFAAS 126 (326)
Q Consensus 74 ~~~l~~g~l~d~~-Grr~~l~~g~~~~~~~~~~-----~~---~~---------------~---~~~l~~~r~l~G~g~g 126 (326)
...+.++.++|-| ||-+++.++.+++.+.... .. -| + ...++.+..+..+|.|
T Consensus 88 ~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~g 167 (571)
T KOG1237|consen 88 LLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAG 167 (571)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccC
Confidence 3446788899865 7999998888776544321 11 11 0 1355566677778888
Q ss_pred HHHhhhhHHHHHHhHhhhhhcCCCcccchh--hHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCchhHHHHHHHHHHH
Q 020422 127 IIWVGEGTYLTAAALSHASNHKLHEGTVIG--SFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVIT 204 (326)
Q Consensus 127 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg--~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr~~~f~~~~~~~~ 204 (326)
+.=++..++-+|-.|+ ..|++++. ..+.+++...+.|..++..+...+-. ..+|.. -|.+..++-.
T Consensus 168 g~r~~~~~fGadQfd~------~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~-----~~~w~l-gf~i~~~~~~ 235 (571)
T KOG1237|consen 168 GIRPCLLAFGADQFDE------LDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQD-----NVGWKL-GFGIPTVLNA 235 (571)
T ss_pred CCCCcchhhcccccCc------cCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhh-----ccccee-eccHHHHHHH
Confidence 7666655544444321 11333334 67777777777777776555433321 235644 2444444444
Q ss_pred HHHHHH
Q 020422 205 LGTILM 210 (326)
Q Consensus 205 l~~il~ 210 (326)
++++++
T Consensus 236 lai~iF 241 (571)
T KOG1237|consen 236 LAILIF 241 (571)
T ss_pred HHHHHH
Confidence 444433
No 265
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=89.66 E-value=12 Score=35.73 Aligned_cols=141 Identities=16% Similarity=0.082 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHHHHHHhHHhhhhhhcCCCCchhHHHHHHHHHHh----hhhhhHHHHHHHhchhhHHHHHhHHH----H
Q 020422 29 DVHILSCAFLLIFLAYGAAQNLETTVNTEGNLGTISLGILYTSFT----CFSLVASLVVRVLGSKNALILGTTGY----W 100 (326)
Q Consensus 29 ~~~~l~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~~~~~~~~~~~----~~~l~~g~l~d~~Grr~~l~~g~~~~----~ 100 (326)
.++..+++..+.|..-.+..++......+.+.....+++.=..-+ .+.+..+++.+|+|..+.=+++...= .
T Consensus 259 ~vflas~alalLY~TVLsf~~lmt~yl~~~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 259 PVFLASFALALLYFTVLSFGGLMTAYLKSQGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 355666665555443333333333332233444333333333222 23467789999999999888877532 2
Q ss_pred HHHHHhhhhh-h-HHHHHHHHHhhhhhH--HHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHH
Q 020422 101 LFVAANLFPS-W-YTMVPASLYLGFAAS--IIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (326)
Q Consensus 101 ~~~~~~~~~~-~-~~l~~~r~l~G~g~g--~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li 176 (326)
+.....+.+. . ...-..-++.|+..+ ++|.-..+. .. ..|+..|+++||...|...+..++--.+-.++
T Consensus 339 ~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~-~q------i~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~ 411 (432)
T PF06963_consen 339 LCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAV-TQ------IMQENVPESERGAVSGVQNSLQSLFELLSFVL 411 (432)
T ss_pred HHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHH-HH------hhcccCCHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 2222233322 1 122223345566655 356543221 11 22445699999999999888777766665444
No 266
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=89.14 E-value=9.5 Score=37.07 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHHhhhccccc--ccccccCcchHHHHHHHHHHHHHHHHHHhhhhhh
Q 020422 234 YLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKE--IVTPALGVSGVGGAMAVYGAFDAISLLGFATFFS 309 (326)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~D 309 (326)
+.++..+.+++++|-|.+..+..+.+.+=. +|..++=... +...+++.+..+......-=..++.....|+.+.
T Consensus 263 ~i~~~Y~~l~~ilkLp~V~~li~ilL~~Ki--gF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~ 338 (544)
T PF13000_consen 263 SIKDVYKSLWKILKLPNVQTLIIILLTAKI--GFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSA 338 (544)
T ss_pred hHHHHHHHHHHHHcCchHHHHHHHHHHHHh--ccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc
Confidence 345556677888888988877655443322 2322221111 2345666665554443333344444555554443
No 267
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=88.95 E-value=23 Score=34.21 Aligned_cols=76 Identities=16% Similarity=0.108 Sum_probs=51.5
Q ss_pred HHHHhchhhHHHHHhHHHHHHHHHh-h-----h-------------hhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHh
Q 020422 82 VVRVLGSKNALILGTTGYWLFVAAN-L-----F-------------PSWYTMVPASLYLGFAASIIWVGEGTYLTAAALS 142 (326)
Q Consensus 82 l~d~~Grr~~l~~g~~~~~~~~~~~-~-----~-------------~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~ 142 (326)
=.+++||++.++++.++..++.+.. + + |++..-.+...+.|++-+..-+....++....
T Consensus 305 rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-- 382 (461)
T KOG3098|consen 305 RIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-- 382 (461)
T ss_pred hhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh--
Confidence 3588999999999888765544432 2 2 13445566789999999987777777777764
Q ss_pred hhhhcCCCcccchhhHHHHHHHHHHH
Q 020422 143 HASNHKLHEGTVIGSFNGEFWGMFAS 168 (326)
Q Consensus 143 ~~~~~~~~~~~~rg~~~gi~~~~~~~ 168 (326)
+++|..+++++-.-...
T Consensus 383 ---------~~~~~~~fsi~kfyq~~ 399 (461)
T KOG3098|consen 383 ---------PDDRAQAFSLFKFYQSV 399 (461)
T ss_pred ---------cCchHHHHHHHHHHHHH
Confidence 45777777765433333
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=86.02 E-value=35 Score=33.14 Aligned_cols=77 Identities=12% Similarity=0.182 Sum_probs=47.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHhHHhhhhhhcCC-CCchhHHHHHHHHHH---hhhhhhHHHHHHHhchhhHHHHHhHHHH
Q 020422 25 NYTRDVHILSCAFLLIFLAYGAAQNLETTVNTE-GNLGTISLGILYTSF---TCFSLVASLVVRVLGSKNALILGTTGYW 100 (326)
Q Consensus 25 ~~~~~~~~l~l~~~~~~~~~~~~~~l~~~l~~~-~~~g~~~~~~~~~~~---~~~~l~~g~l~d~~Grr~~l~~g~~~~~ 100 (326)
.+++.++-+++.+.+....+...-.+-+.+... .+...++..-.+.+. .+.-++-..+.+++.|.+++-.-...+.
T Consensus 24 ~E~~kflpl~Ll~f~I~~ny~~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~ 103 (509)
T COG3202 24 YELKKFLPLALLFFCILFNYNLLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFL 103 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 577888888888888777777666666555433 233333322222211 2333456788999999999876665544
Q ss_pred H
Q 020422 101 L 101 (326)
Q Consensus 101 ~ 101 (326)
.
T Consensus 104 ~ 104 (509)
T COG3202 104 G 104 (509)
T ss_pred H
Confidence 4
No 269
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=84.05 E-value=4.6 Score=38.62 Aligned_cols=140 Identities=11% Similarity=-0.035 Sum_probs=74.1
Q ss_pred cchhHHHHHHHHHHHHHHHHhHHhhhh-hhcCC----CCchhHHHHHHHHHHhhhhhhHHHHHHHhc-hhhHHHHHhHHH
Q 020422 26 YTRDVHILSCAFLLIFLAYGAAQNLET-TVNTE----GNLGTISLGILYTSFTCFSLVASLVVRVLG-SKNALILGTTGY 99 (326)
Q Consensus 26 ~~~~~~~l~l~~~~~~~~~~~~~~l~~-~l~~~----~~~g~~~~~~~~~~~~~~~l~~g~l~d~~G-rr~~l~~g~~~~ 99 (326)
.-++.+++.+.+.+.+..|.....+.. .+... ...|... .+...+-.+++..+|.++||.. .|.+..+.....
T Consensus 264 ~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig-~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~ 342 (480)
T KOG2563|consen 264 KNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIG-ALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFA 342 (480)
T ss_pred cCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhH-HHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 345677777777777777776654433 44322 2334433 3333455778889999999987 455555444443
Q ss_pred HHHHHHh--hhh---hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHH
Q 020422 100 WLFVAAN--LFP---SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN 174 (326)
Q Consensus 100 ~~~~~~~--~~~---~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~ 174 (326)
.++++.. .+. ....+...-.+.|.......|...-.-.|.. .|..|+ .-.|+. +.+|+++|-
T Consensus 343 ~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~T---------yPv~E~-tSsGll---~~~gq~f~~ 409 (480)
T KOG2563|consen 343 LVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETT---------YPVAEG-TSSGLL---NLSGQIFGV 409 (480)
T ss_pred HHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeec---------cccCCc-ccceeE---EeehhHHHH
Confidence 4443221 111 2233444556677777666664433334432 144343 334543 345566665
Q ss_pred HHHHH
Q 020422 175 LITLA 179 (326)
Q Consensus 175 li~~~ 179 (326)
++...
T Consensus 410 ~~~~~ 414 (480)
T KOG2563|consen 410 ILVFI 414 (480)
T ss_pred HHHHH
Confidence 54433
No 270
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=83.97 E-value=0.66 Score=44.24 Aligned_cols=43 Identities=12% Similarity=0.080 Sum_probs=37.3
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 280 ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 280 ~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
+.+.+..|+....+.+.-+++++++|+++|| |+.++.+|.++-
T Consensus 64 ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW 108 (493)
T KOG1330|consen 64 NISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIW 108 (493)
T ss_pred CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHH
Confidence 5677788999999999999999999999999 998888887653
No 271
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=82.52 E-value=2.9 Score=36.92 Aligned_cols=28 Identities=4% Similarity=-0.041 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhh---hhhHHh
Q 020422 289 AMAVYGAFDAISLLGFATFFSV---HSLLVG 316 (326)
Q Consensus 289 ~~~~~gi~~~~g~~~~G~l~Dr---R~~~~~ 316 (326)
...++-.+-.+|....|..+.. ||+.+.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~ 176 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIH 176 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHH
Confidence 3444555555777778887775 555433
No 272
>COG4769 Predicted membrane protein [Function unknown]
Probab=79.87 E-value=19 Score=29.31 Aligned_cols=50 Identities=16% Similarity=0.182 Sum_probs=35.0
Q ss_pred hhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHH
Q 020422 73 TCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 73 ~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 127 (326)
++.+...-++..++|+|..-.+|.. +.+.+.+|..++++++.+.|-...+
T Consensus 87 ~i~S~L~m~~l~~f~~k~~S~lgiS-----~mGaF~hNl~QLivas~Lv~~~~v~ 136 (181)
T COG4769 87 AILSTLFMYFLYQFGPKYLSLLGIS-----VMGAFTHNLGQLIVASFLVFTTSVM 136 (181)
T ss_pred HHHHHHHHHHHHHcCCceEeeeehh-----hHHHHHHhHHHHHHHHHHHhcchHH
Confidence 4555667789999999987555443 3344568888888888887655544
No 273
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=79.53 E-value=1.4 Score=44.34 Aligned_cols=43 Identities=14% Similarity=0.181 Sum_probs=35.2
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 280 ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 280 ~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
+++.++.|++...+.++.+++.++.|++.|| ||+.+..|.++.
T Consensus 64 ~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~ 108 (633)
T TIGR00805 64 KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIM 108 (633)
T ss_pred CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHH
Confidence 4556678999999999999999999999999 777766666554
No 274
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=76.19 E-value=5.9 Score=28.61 Aligned_cols=45 Identities=13% Similarity=-0.034 Sum_probs=34.7
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHh
Q 020422 278 TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFH 322 (326)
Q Consensus 278 ~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~ 322 (326)
+..++.++.+++-....++=.+|.+...++.++ ++.++..+.++.
T Consensus 21 ~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~ 67 (85)
T PF06779_consen 21 DGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLT 67 (85)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 446777889999999999999999999999997 355555555544
No 275
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=74.74 E-value=12 Score=36.88 Aligned_cols=33 Identities=12% Similarity=0.151 Sum_probs=17.6
Q ss_pred hchHHHHHHHHHHhhhcchhHHHHHHHHHhhHHHHH
Q 020422 232 YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF 267 (326)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 267 (326)
..+||.... +++|.|+-..+...+.-+|.+...
T Consensus 244 e~GWKlvhg---DVFR~P~~~~lls~lvG~G~Qll~ 276 (521)
T PF02990_consen 244 ESGWKLVHG---DVFRPPKHPMLLSALVGTGIQLLF 276 (521)
T ss_pred ccchhhhhH---HHhcCcCCchHHHhHhcchhhhhH
Confidence 446654333 456666655555555556666443
No 276
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=68.12 E-value=27 Score=34.76 Aligned_cols=62 Identities=11% Similarity=0.113 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhc
Q 020422 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 182 (326)
Q Consensus 111 ~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~ 182 (326)
...++.-.++.|+++....++..-+.-+- .|++.|+..++++.....+|..+..++...+..
T Consensus 458 i~W~iPQyvLig~~Evf~~vg~lEFfY~q----------aP~sMkS~~~al~l~t~a~G~~lss~Lv~~v~~ 519 (571)
T KOG1237|consen 458 ILWQIPQYVLLGAGEVFTSVGGLEFFYSQ----------APESMKSVATALWLLTVAVGNYLSSVLVSLVQF 519 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHhHhh----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556788999999999887765544333 399999999999999999999888877655543
No 277
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=67.71 E-value=5.9 Score=38.81 Aligned_cols=41 Identities=10% Similarity=-0.016 Sum_probs=32.8
Q ss_pred ccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHH
Q 020422 280 ALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLV 320 (326)
Q Consensus 280 ~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~ 320 (326)
+++++++|..+..--+..+++.++.|+++|| |++.+..|..
T Consensus 42 Gl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl 84 (618)
T KOG3762|consen 42 GLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSL 84 (618)
T ss_pred CCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHH
Confidence 5677899999999999999999999999999 3444444443
No 278
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=61.95 E-value=9.8 Score=36.93 Aligned_cols=45 Identities=16% Similarity=0.081 Sum_probs=36.2
Q ss_pred cccCcchHHHHHHHHHHHHHHHHHHhhhhhhh-h--hhHHhHHHHHhh
Q 020422 279 PALGVSGVGGAMAVYGAFDAISLLGFATFFSV-H--SLLVGLPLVFHL 323 (326)
Q Consensus 279 ~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr-R--~~~~~~g~~~~~ 323 (326)
.+.+.+..|++.+...++.+++++..|+.+.| + |+.+++|.++++
T Consensus 66 ~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~ 113 (488)
T KOG2325|consen 66 PTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAI 113 (488)
T ss_pred CCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHH
Confidence 34455678999999999999999999999999 3 667777776554
No 279
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=59.63 E-value=1.1e+02 Score=27.15 Aligned_cols=59 Identities=19% Similarity=0.277 Sum_probs=34.7
Q ss_pred hHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH
Q 020422 111 WYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (326)
Q Consensus 111 ~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~ 177 (326)
...++...++.|. ..|..|+..+.- .+++.|+ .|++-|..+|+.|....+...+..++.
T Consensus 204 ~~~f~I~~Fl~G~---f~WgiQ~ViL~l----PhEyK~~-~pk~ig~~Fg~iWGfGY~~yTi~~Ii~ 262 (267)
T PF07672_consen 204 FAFFYIFGFLAGF---FLWGIQGVILNL----PHEYKGY-NPKKIGIQFGLIWGFGYIFYTIYDIIL 262 (267)
T ss_pred HHHHHHHHHHHHH---HHHhhhHHHhcC----hhhhcCC-CcceehhHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555554 357777665532 2234444 677889999988876666555554443
No 280
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=59.04 E-value=3.5 Score=37.44 Aligned_cols=55 Identities=11% Similarity=0.143 Sum_probs=2.2
Q ss_pred HHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHH
Q 020422 114 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL 178 (326)
Q Consensus 114 l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~ 178 (326)
.++.-++.|+.-|-+-+....+..+.. ++++|..+-.+......+|..+|..++.
T Consensus 251 ~~i~~~l~g~TNGyl~tl~m~~~p~~v----------~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 251 FIILMLLFGFTNGYLSTLAMMYAPKSV----------SPEERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp ----------------HHHH---------------------------------------------
T ss_pred HHHHHHHHHHccchhhhceeeeCCCcC----------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334457888888876555555554443 5777877766665566677777766653
No 281
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=52.90 E-value=43 Score=30.78 Aligned_cols=70 Identities=20% Similarity=0.198 Sum_probs=45.2
Q ss_pred HHHHHHHh-hhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH
Q 020422 99 YWLFVAAN-LFPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (326)
Q Consensus 99 ~~~~~~~~-~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~ 177 (326)
+.+..... +.|+++..++.-+..|+-.|..+.. ... ..++..+|++|..+++.....-+.|..++++++
T Consensus 329 ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVN------Tf~----~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~la 398 (409)
T KOG3880|consen 329 FFLLQAWYWFTPSIWIVFALILFEGLLGGASYVN------TFH----NIHKETEPDVREFAMSAVSISDSIGIFLAGLLA 398 (409)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHH------HHH----HHhhcCCchHHHHhHhhheecchhhHHHHHHHh
Confidence 33333443 6788887777777888888765443 221 223344889999999977666666766666554
Q ss_pred H
Q 020422 178 L 178 (326)
Q Consensus 178 ~ 178 (326)
.
T Consensus 399 l 399 (409)
T KOG3880|consen 399 L 399 (409)
T ss_pred c
Confidence 3
No 282
>COG4721 ABC-type cobalt transport system, predicted permease component [Inorganic ion transport and metabolism]
Probab=52.85 E-value=29 Score=28.34 Aligned_cols=98 Identities=20% Similarity=0.197 Sum_probs=50.1
Q ss_pred cccchhHHHHHHH---HHHHHHHHHhHHhhhhhhc----CCCCchhHHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHh
Q 020422 24 KNYTRDVHILSCA---FLLIFLAYGAAQNLETTVN----TEGNLGTISLGILYTSFTCFSLVASLVVRVLGSKNALILGT 96 (326)
Q Consensus 24 ~~~~~~~~~l~l~---~~~~~~~~~~~~~l~~~l~----~~~~~g~~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~ 96 (326)
+.+.|+++++++. |-.+|..+...++++.... .++..+ .+.+..+-.++++++.+..|-|.... +=
T Consensus 4 swklkdIvi~svlsi~fgvvfl~w~~~~~v~at~lhp~ale~~~~----~i~~GiW~maavi~~l~IpkpGaAl~---~E 76 (192)
T COG4721 4 SWKLKDIVILSVLSIVFGVVFLGWGYVGNVLATLLHPLALEPFAN----EILFGIWFMAAVIAALFIPKPGAALI---GE 76 (192)
T ss_pred chhhHHHHHHHHHHHHHHhheeehhhhhHHHHHhcchhhcCcccc----chHHHHHHHHHHHeeeeecCCcHHHH---HH
Confidence 4556777776665 3334544444555544332 333333 34455565666667777777665432 22
Q ss_pred HHHHHHHHHhhhhhhHHHHHHHHHhhhhhHHH
Q 020422 97 TGYWLFVAANLFPSWYTMVPASLYLGFAASII 128 (326)
Q Consensus 97 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~ 128 (326)
++.++.......+.=..-+...+.||+|+=..
T Consensus 77 v~Aa~ve~ll~sqfgi~tivsgfvQGlgaE~v 108 (192)
T COG4721 77 VLAALVEVLLGSQFGIGTIVSGFVQGLGAEFV 108 (192)
T ss_pred HHHHHHHHHHcCCCCchHHHHHHHHhhhhhHH
Confidence 22222222222232223345778999988653
No 283
>PF08035 Op_neuropeptide: Opioids neuropeptide; InterPro: IPR013532 Pro-opiomelanocortin is present in high levels in the pituitary and is processed into 3 major peptide families: adrenocorticotrophin (ACTH); alpha-, beta- and gamma-melanocyte- stimulating hormones (MSH); and beta-endorphin []. ACTH regulates the synthesis and release of glucocorticoids and, to some extent, aldosterone in the adrenal cortex. It is synthesised and released in response to corticotrophin-releasing factor at times of stress (i.e. heat, cold, infection, etc.), its release leading to increased metabolism. The action of MSH in man is poorly understood, but it may be involved in temperature regulation []. Full activity of ACTH resides in the first 20 N-terminal amino acids, the first 13 of which are identical to alpha-MSH [, ]. This region corresponds to the conserved YGG motif that is found in a wide variety of opioid neuropeptides such as enkephalin
Probab=52.49 E-value=6.1 Score=22.45 Aligned_cols=17 Identities=41% Similarity=0.431 Sum_probs=13.2
Q ss_pred CCCCCCCCCCCccccccc
Q 020422 1 MESVDSRDEEAPLVADSL 18 (326)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~ 18 (326)
|.|-||++| .||+.--+
T Consensus 5 M~s~~e~s~-~PLvtlfk 21 (31)
T PF08035_consen 5 MKSWDERSH-KPLVTLFK 21 (31)
T ss_pred ccccccccC-CchHHHHH
Confidence 678889888 89987544
No 284
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=52.05 E-value=55 Score=26.49 Aligned_cols=76 Identities=21% Similarity=0.211 Sum_probs=43.6
Q ss_pred HHHHHhchhhHHHHHhH---HHHHHHHHh-h-------hhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCC
Q 020422 81 LVVRVLGSKNALILGTT---GYWLFVAAN-L-------FPSWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKL 149 (326)
Q Consensus 81 ~l~d~~Grr~~l~~g~~---~~~~~~~~~-~-------~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~ 149 (326)
.++||.-||..+..|.= +++.+.+.. + .|++..+...-.+-|+|.-++ +...++. .
T Consensus 56 ~Vs~RM~rRm~~~~GiP~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gllGi---sYGilSa----------S 122 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGIPTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLLGI---SYGILSA----------S 122 (153)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHHhh---hhhhccc----------c
Confidence 56788888887766542 223333332 1 356666666666666665442 2222222 2
Q ss_pred CcccchhhHHHHHHHHHHHh
Q 020422 150 HEGTVIGSFNGEFWGMFASH 169 (326)
Q Consensus 150 ~~~~~rg~~~gi~~~~~~~g 169 (326)
|+|++-|...|+-..-.+.+
T Consensus 123 WD~~r~GSllG~~e~~~N~~ 142 (153)
T PF11947_consen 123 WDPEREGSLLGWEEFKRNWG 142 (153)
T ss_pred cCCCCCCCcccHHHHHHhHH
Confidence 47888899888776655554
No 285
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=51.70 E-value=2.3e+02 Score=27.22 Aligned_cols=52 Identities=6% Similarity=-0.022 Sum_probs=31.2
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHH
Q 020422 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLI 176 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li 176 (326)
.+...+..-++.|++.+....+..++.+.. |++ .++.++.+..+++.++.++
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~~f-----------p~~----~~~a~~~G~g~aGv~~s~~ 156 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAGVF-----------PST----YSSAVMSGQGLAGVLTSLA 156 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcccC-----------CHH----HHHHHHhcchhHHHHHHHH
Confidence 455666667788999888776666655543 432 3444455555555555544
No 286
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=43.90 E-value=34 Score=30.10 Aligned_cols=55 Identities=7% Similarity=0.111 Sum_probs=33.2
Q ss_pred HhhhcccccccccccCcc--hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHHHHhh
Q 020422 267 FVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPLVFHL 323 (326)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~--~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~~~~~ 323 (326)
|.++.|.+.+.+ .++.+ +....-..-.++..+ .++.|.+.|| -+..+.+|++.+.
T Consensus 19 Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~ 77 (250)
T PF06813_consen 19 YTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGF 77 (250)
T ss_pred cchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHH
Confidence 334456666542 34444 444444555566655 4888999999 4566667776553
No 287
>KOG2887 consensus Membrane protein involved in ER to Golgi transport [Intracellular trafficking, secretion, and vesicular transport]
Probab=43.74 E-value=1.9e+02 Score=23.93 Aligned_cols=45 Identities=4% Similarity=-0.105 Sum_probs=25.8
Q ss_pred HHHHHhchhhHHHHHh-HHHHHHHHH--hhhhhhHHHHHHHHHhhhhh
Q 020422 81 LVVRVLGSKNALILGT-TGYWLFVAA--NLFPSWYTMVPASLYLGFAA 125 (326)
Q Consensus 81 ~l~d~~Grr~~l~~g~-~~~~~~~~~--~~~~~~~~l~~~r~l~G~g~ 125 (326)
.+-.-+.++|...... +...+.++. ...+|...-+++.+++.++.
T Consensus 101 ql~~m~~p~Rl~~T~~~l~~~~~Tly~al~~ks~iLtllf~ilq~lal 148 (175)
T KOG2887|consen 101 QLKHMFSPERLPATLSYLATMVLTLYVALWLKSKILTLLFCILQVLAL 148 (175)
T ss_pred HHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666554433 333334433 25677776667778887765
No 288
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=39.33 E-value=1.3e+02 Score=26.94 Aligned_cols=39 Identities=31% Similarity=0.439 Sum_probs=24.8
Q ss_pred CCCCCc----cccccccccCccccchhHHHHHHHHHHHHHHHHhHH
Q 020422 7 RDEEAP----LVADSLQVLTPKNYTRDVHILSCAFLLIFLAYGAAQ 48 (326)
Q Consensus 7 ~~~~~~----~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~ 48 (326)
.+|+|| |+..+. ..+..|.+..+++.++++.+..+.-.+
T Consensus 20 ~s~e~p~ki~llg~~l---s~kpkw~QFlic~~g~Ff~Yl~yGy~q 62 (367)
T KOG1582|consen 20 ISEEQPSKIKLLGFNL---SDKPKWTQFLICSAGVFFLYLVYGYLQ 62 (367)
T ss_pred ccccCCcceeEEeecc---ccCchhhhHHHHHhHHHHHHHHHHHHH
Confidence 446666 554422 233467788889988888777666444
No 289
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=37.77 E-value=83 Score=29.86 Aligned_cols=58 Identities=10% Similarity=-0.091 Sum_probs=31.8
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHH
Q 020422 110 SWYTMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 177 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~ 177 (326)
+-+..+..-.+.|+.-|-+...... .+|| ..+++++..+-.+.......|...|.+++
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~----~aPk------~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s 399 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMM----YAPK------QVKPSEKEAAGNLMVFFLVGGLALGSLLS 399 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheeh----hcCC------CCChHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3334444567888888865544333 3332 12566666655544444555666665554
No 290
>PRK10692 hypothetical protein; Provisional
Probab=37.45 E-value=69 Score=23.07 Aligned_cols=46 Identities=7% Similarity=-0.018 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHhhhhhHH-HHhhhhHHH--HHHhHhhhhhcCCCcccch
Q 020422 110 SWYTMVPASLYLGFAASI-IWVGEGTYL--TAAALSHASNHKLHEGTVI 155 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~-~~~~~~~~l--~~~~~~~~~~~~~~~~~~r 155 (326)
+.+.++.-..+.|+..|. +|-+..-.- ..++|||-+..++....+|
T Consensus 37 ~Lp~~~~~gal~~IFiGAllWL~GArigGRE~VaDRYwwvkh~d~rcrr 85 (92)
T PRK10692 37 NLPQFFAHGALLSIFVGALLWLAGARVGGREQVADRYWWVRHYDKRCRR 85 (92)
T ss_pred CchHHHHhhHHHHHHHHHHHHHhcccccCcchhhhhHHHHhhccHhhcc
Confidence 456777777888888774 565432211 2467888888887444444
No 291
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=34.89 E-value=23 Score=31.86 Aligned_cols=42 Identities=7% Similarity=-0.136 Sum_probs=30.3
Q ss_pred ccccCcchHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 278 TPALGVSGVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 278 ~~~~~~~~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
+++++..++|..++..-...++...+.|.++|+ ||+-.+.=.
T Consensus 66 tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtyc 109 (454)
T KOG4332|consen 66 TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYC 109 (454)
T ss_pred hcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeeh
Confidence 356777788877776666777888889999999 765544333
No 292
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=34.14 E-value=2.9e+02 Score=28.16 Aligned_cols=76 Identities=11% Similarity=0.045 Sum_probs=44.5
Q ss_pred HHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCch
Q 020422 113 TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT 192 (326)
Q Consensus 113 ~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr 192 (326)
-.++--++.|+|+........-+--+- .|++.+....+++.....+|..+...+..+-. ..+.
T Consensus 567 wq~pq~~~~~~~e~~~~~~~~e~~~~~----------~p~~mks~~~a~~~~~~~~g~~~~~~~~~~~~-------~~~~ 629 (654)
T TIGR00926 567 WQIPQYVILTAGEVLFSVTGLEFSYSQ----------APPNMKSVLQALWLLTVAIGNLIVVVIAEFEN-------FSVQ 629 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHh----------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ChHH
Confidence 334556788888887666544333222 38888998888887777666666554432211 2234
Q ss_pred hHHHHHHHHHHHH
Q 020422 193 TLLFIVFLGVITL 205 (326)
Q Consensus 193 ~~~f~~~~~~~~l 205 (326)
+..|..++.+.++
T Consensus 630 ~~~~~~~~~~~~~ 642 (654)
T TIGR00926 630 AAEFFLFASLMLV 642 (654)
T ss_pred HHHHHHHHHHHHH
Confidence 4445555555443
No 293
>COG2119 Predicted membrane protein [Function unknown]
Probab=33.41 E-value=2.9e+02 Score=23.16 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=28.0
Q ss_pred HHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHH
Q 020422 70 TSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAA 105 (326)
Q Consensus 70 ~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~ 105 (326)
.+..++-..+.++++|+..|.+-..+.+++.++..-
T Consensus 145 l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal~ 180 (190)
T COG2119 145 LASVLAVLLGKLIAGKLPERLLRFIAALLFLIFALV 180 (190)
T ss_pred HHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHH
Confidence 444555667789999999999999999887766544
No 294
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=30.90 E-value=28 Score=27.20 Aligned_cols=13 Identities=23% Similarity=0.378 Sum_probs=5.3
Q ss_pred hhHHHHHHHHHHH
Q 020422 192 TTLLFIVFLGVIT 204 (326)
Q Consensus 192 r~~~f~~~~~~~~ 204 (326)
||++|++++++.+
T Consensus 1 RW~l~~iii~~i~ 13 (130)
T PF12273_consen 1 RWVLFAIIIVAIL 13 (130)
T ss_pred CeeeHHHHHHHHH
Confidence 3444444333333
No 295
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=29.83 E-value=67 Score=23.00 Aligned_cols=46 Identities=4% Similarity=-0.042 Sum_probs=27.6
Q ss_pred hhHHHHHHHHHhhhhhHH-HHhhhhHHH--HHHhHhhhhhcCCCcccch
Q 020422 110 SWYTMVPASLYLGFAASI-IWVGEGTYL--TAAALSHASNHKLHEGTVI 155 (326)
Q Consensus 110 ~~~~l~~~r~l~G~g~g~-~~~~~~~~l--~~~~~~~~~~~~~~~~~~r 155 (326)
+.+.++.-..+.|+..|. +|-+..-.- ..++|||-+.+++....+|
T Consensus 37 ~Lp~~~~~gal~~IFiGAllWL~GARigGrE~VaDRYwWvkh~DkRcrr 85 (89)
T PF10762_consen 37 GLPQFLAHGALFSIFIGALLWLVGARIGGREKVADRYWWVKHFDKRCRR 85 (89)
T ss_pred CCcHHHHhhHHHHHHHHHHHHHhcccccCcchhhhhHHHHHhhhHhhcc
Confidence 456677777888888774 565422111 2367888887776433333
No 296
>PF09819 ABC_cobalt: ABC-type cobalt transport system, permease component; InterPro: IPR017195 This group represents a predicted ABC-type thiamin-related transport system, permease component 1. It is probably part of the ABC transporter complex ykoCDEF that could transport hydroxymethylpyrimidine (HMP) and/or thiamine. It could also transport other HMP-containing products. The complex is composed of two ATP-binding proteins (ykoD), two transmembrane proteins (ykoC and ykoE) and a solute-binding protein (ykoF).
Probab=26.26 E-value=3.2e+02 Score=21.37 Aligned_cols=62 Identities=18% Similarity=0.097 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhhhhhhHHHHHHHhchhhHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHhhhhhHH
Q 020422 63 ISLGILYTSFTCFSLVASLVVRVLGSKNALILGTTGYWLFVAANLFPSWYTMVPASLYLGFAASI 127 (326)
Q Consensus 63 ~~~~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~ 127 (326)
....+.+..+.+..+++..+.+|-|.-.. +-.+-++.....-.+.=...+...++||++.=.
T Consensus 38 ~~~~~~~GlW~~a~~la~~iiRKPGaa~~---~e~laa~ve~~~G~~~G~~~ii~gl~QGlg~El 99 (129)
T PF09819_consen 38 LAGGILYGLWFMAGPLAAYIIRKPGAALL---AELLAALVEMLLGSQWGIMTIISGLVQGLGAEL 99 (129)
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCcHHHH---HHHHHHHHHHHhcCcchHHHHHHHHHhHHHHHH
Confidence 34556677777888888899988885432 122122211111112112334566777777643
No 297
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=26.00 E-value=94 Score=26.32 Aligned_cols=35 Identities=14% Similarity=-0.086 Sum_probs=27.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhh--hhhHHhHHH
Q 020422 285 GVGGAMAVYGAFDAISLLGFATFFSV--HSLLVGLPL 319 (326)
Q Consensus 285 ~~g~~~~~~gi~~~~g~~~~G~l~Dr--R~~~~~~g~ 319 (326)
..++....+.+...++..+.|+++|| ||+.++.+.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 76 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGL 76 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHH
Confidence 46777888888888888999999998 665555554
No 298
>PF10797 YhfT: Protein of unknown function; InterPro: IPR019733 This entry contains predicted inner membrane proteins, whose function is unknown.
Probab=25.78 E-value=5.5e+02 Score=24.30 Aligned_cols=35 Identities=14% Similarity=0.125 Sum_probs=21.9
Q ss_pred CCCCCCCCCccccc-cccccCccccchhHHHHHHHHHHH
Q 020422 3 SVDSRDEEAPLVAD-SLQVLTPKNYTRDVHILSCAFLLI 40 (326)
Q Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~l~~~~~ 40 (326)
+.+++++.+++... |+ +-+|.+||++.+.+.-.++
T Consensus 205 k~~~~~~~~~l~slF~~---rv~RIkKN~~~L~i~GaLi 240 (420)
T PF10797_consen 205 KSSEETSNESLASLFSE---RVARIKKNLPLLAIMGALI 240 (420)
T ss_pred hcccccccchHHHHHHH---HHHHHHhccHHHHHHHHHH
Confidence 34455555555554 33 3568999999988865443
No 299
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=23.31 E-value=4e+02 Score=23.58 Aligned_cols=26 Identities=8% Similarity=0.131 Sum_probs=12.7
Q ss_pred HHHHhhhhhh-HHHHHHHhchhhHHHH
Q 020422 69 YTSFTCFSLV-ASLVVRVLGSKNALIL 94 (326)
Q Consensus 69 ~~~~~~~~l~-~g~l~d~~Grr~~l~~ 94 (326)
+.+..+++++ --.-.+++.+|..+..
T Consensus 90 F~GLIlgSip~l~k~~~~~~~~~~~~~ 116 (257)
T PF04018_consen 90 FFGLILGSIPFLYKEIKKFSPKSIIFF 116 (257)
T ss_pred HHHHHHHHHHHHHHHhccCCHHHHHHH
Confidence 3444444433 2334566666665443
No 300
>PF07330 DUF1467: Protein of unknown function (DUF1467); InterPro: IPR009935 This family consists of several bacterial proteins of around 90 residues in length. The function of this family is unknown.
Probab=22.55 E-value=2.1e+02 Score=20.61 Aligned_cols=33 Identities=18% Similarity=0.198 Sum_probs=18.8
Q ss_pred CCCCCCCCccccccc--cccCccccchhHHHHHHH
Q 020422 4 VDSRDEEAPLVADSL--QVLTPKNYTRDVHILSCA 36 (326)
Q Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~ 36 (326)
+.+.+|+.+.+++++ -|.|.+-.+|-++.-.++
T Consensus 26 vrtq~E~g~vv~Gt~~sAP~~~~l~rk~~~TTiia 60 (85)
T PF07330_consen 26 VRTQDEAGEVVPGTDPSAPANPRLKRKALITTIIA 60 (85)
T ss_pred ccccCcCCCcCCCCCCCCCCCchHHHHHHHHHHHH
Confidence 445666677777755 566666555544444433
No 301
>PRK15015 carbon starvation protein A; Provisional
Probab=21.03 E-value=4.9e+02 Score=26.55 Aligned_cols=36 Identities=11% Similarity=0.204 Sum_probs=21.7
Q ss_pred hhhhhcCCCcccchhhHHHHHHH-HHHHhHHHHHHHHH
Q 020422 142 SHASNHKLHEGTVIGSFNGEFWG-MFASHQFVGNLITL 178 (326)
Q Consensus 142 ~~~~~~~~~~~~~rg~~~gi~~~-~~~~g~~~G~li~~ 178 (326)
++.+..||.|.+++ ..+|-.++ .-..|.++||.++.
T Consensus 73 ~~~DG~DYvPt~k~-VLfGHHFasIAGAGPivGPvlAa 109 (701)
T PRK15015 73 RHNDGLDYVPTDKK-VLFGHHFAAIAGAGPLVGPVLAA 109 (701)
T ss_pred ECCCCCCcCcCCcc-chhHHHHHHHhccCccHHHHHHH
Confidence 44566788887665 44454333 34566777777764
No 302
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=20.25 E-value=8.4e+02 Score=24.05 Aligned_cols=74 Identities=7% Similarity=-0.108 Sum_probs=41.3
Q ss_pred HHHHHHHhhhhhhHHHHHHHhchhhHHHHHhH--HHHHHHH-HhhhhhhHHHHHHHHHhhhhhHHHHhhhhHHHHHH
Q 020422 66 GILYTSFTCFSLVASLVVRVLGSKNALILGTT--GYWLFVA-ANLFPSWYTMVPASLYLGFAASIIWVGEGTYLTAA 139 (326)
Q Consensus 66 ~~~~~~~~~~~l~~g~l~d~~Grr~~l~~g~~--~~~~~~~-~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~l~~~ 139 (326)
++..+..+++++.+|.+-.++.+---+.++.+ +-+.... ....+|.+.-+++.++-+..-....+.+..-++..
T Consensus 305 A~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~ 381 (511)
T TIGR00806 305 AASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASS 381 (511)
T ss_pred HHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456778888888665533222333222 2222222 23567888888887777777776666555555554
No 303
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=20.21 E-value=8.2e+02 Score=23.93 Aligned_cols=80 Identities=13% Similarity=0.131 Sum_probs=42.1
Q ss_pred HHHHHHHHhhhhhHHHHhhhhHHHHHHhHhhhhhcCCCcccchhhHHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCch
Q 020422 113 TMVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT 192 (326)
Q Consensus 113 ~l~~~r~l~G~g~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~rg~~~gi~~~~~~~g~~~G~li~~~l~~~~~~~~~~wr 192 (326)
.+.=.|-+.++..=..--....-+.|..-|....+-+++|+++...+|-+....+.-..+-.+++..+.+. .||+
T Consensus 275 ~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~-----~GW~ 349 (491)
T PF03219_consen 275 LLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR-----FGWR 349 (491)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhHH
Confidence 33344555555543322222233344443444444556778888888888766655444444555555443 4788
Q ss_pred hHHHH
Q 020422 193 TLLFI 197 (326)
Q Consensus 193 ~~~f~ 197 (326)
....+
T Consensus 350 ~~Ali 354 (491)
T PF03219_consen 350 TAALI 354 (491)
T ss_pred HHHHH
Confidence 75443
Done!