BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020424
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1
Length = 301
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/320 (34%), Positives = 167/320 (52%), Gaps = 47/320 (14%)
Query: 19 QGRSALIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCE 78
+G S L+F+GTGCSS +PN +C L P C+ C +L+ P N R NTS+L+ +
Sbjct: 3 KGTSKLLFMGTGCSSGIPN-VCCLTLEKPTCRTCLASLT--PEGRKNNRFNTSVLLQVDD 59
Query: 79 GDG-KHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRA-----V 132
G G + ILID GK F L+ F HKI +D++ILTH+HADA+ G+DD+R +
Sbjct: 60 GSGDRPKNILIDCGKHFYVSALKHFVEHKIRYLDAVILTHDHADAINGMDDLREWTLGFL 119
Query: 133 QPYSATNDIDPTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKP 192
QP I+L++ + I FPY+V K G V D+ + DKP
Sbjct: 120 QP--------SVKIYLTERTYKVIERSFPYMVNAKNATGG--GSVPTFDFHVFSP--DKP 167
Query: 193 FVAS--GLKFVPLPVMHG---------EDYVCLGFLFGEKCRVAYISDVSRIPPTTEYVI 241
F + PLPV HG + Y C+GF G+ ++YISD + +PPTT+ ++
Sbjct: 168 FKLDDIDISVTPLPVHHGVYFIEGKESQTYFCMGFRVGD---MSYISDCNYVPPTTKKLM 224
Query: 242 SKSGAGQLDLLILDTLYKDGCHNTHFCFPQTLEAVKRL--CPKQALLIGMTHEFDHHKDN 299
S +++++D L K + +HF F Q E + L P + L G +H+ +H N
Sbjct: 225 EGS-----NVVVVDAL-KHEPYPSHFSFKQAEEFIASLEHVPSRVLYTGFSHKVEH---N 275
Query: 300 EFLAEWSKREGIPVQLSHDG 319
E + E S + +P + ++DG
Sbjct: 276 ETVKELSVLK-VPTEPAYDG 294
>sp|Q7MUY1|LIPB_PORGI Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=lipB PE=3 SV=1
Length = 492
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 135/301 (44%), Gaps = 46/301 (15%)
Query: 25 IFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHS 84
I LG+G S+ +P C C+VC + R TSLLI G
Sbjct: 4 ILLGSGTSTGVPEVGC-------HCRVC------RSEDRHDKRTRTSLLIITDAG----K 46
Query: 85 YILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144
ILID FR+Q L F I +D+++LTHEH D V GLDD+R + +
Sbjct: 47 RILIDCSPDFRQQAL----FAGIDSLDAVLLTHEHFDHVGGLDDLRTICWHRE------L 96
Query: 145 PIFLSQFAMESISTKFPYLVQKKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGLKFVPLP 204
++ Q ++SI + Y+ +K G + K+ E D PF + L PL
Sbjct: 97 AVYAEQNVLDSIRDRLHYVFRKNPYPGTPL-------LKLCEVKPDMPFQVADLTVEPLR 149
Query: 205 VMHGEDYVCLGFLFGEKCRVAYISDVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHN 264
+MHG + LG+ GE +A+++D+ I E KS LL ++ L H
Sbjct: 150 IMHGRLPI-LGYKIGE---MAFLTDMKDI-AAEEIECLKS----CRLLFINGLRYRKEHP 200
Query: 265 THFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDN-EFLAE--WSKREGIPVQLSHDGLR 321
+H Q ++ + ++ +++LI ++H H+++ E L S +G+ + G+R
Sbjct: 201 SHQTIEQAIDTIGQIGNPESVLIHLSHHAPLHQEHLEILPPHIHSGYDGLEAIIDEKGIR 260
Query: 322 I 322
I
Sbjct: 261 I 261
>sp|Q04B09|RNZ_LACDB Ribonuclease Z OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC BAA-365) GN=rnz PE=3 SV=1
Length = 309
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
L D G+ + QILR T ++ ++ I ++H H D + GL + + + + D+ P I
Sbjct: 35 LFDCGEATQHQILR--TNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQG--DVGPLTI 90
Query: 147 F----LSQFAMESI---STKFPYLVQ-KKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGL 198
+ + QF S+ TK Y ++ L+EG ++ V++ +++ E D + G
Sbjct: 91 YGPAGIEQFVKTSLRISKTKISYPIKFVTLEEGGKI--VSERGFEVYTEKLDHRIDSWGF 148
Query: 199 KFV 201
+ V
Sbjct: 149 RMV 151
>sp|Q1GAM2|RNZ_LACDA Ribonuclease Z OS=Lactobacillus delbrueckii subsp. bulgaricus
(strain ATCC 11842 / DSM 20081) GN=rnz PE=3 SV=1
Length = 309
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 14/123 (11%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
L D G+ + QILR T ++ ++ I ++H H D + GL + + + + D+ P I
Sbjct: 35 LFDCGEATQHQILR--TNIRLRKITKIFISHNHGDHIFGLPGLLSTRSFQG--DVGPLTI 90
Query: 147 F----LSQFAMESI---STKFPYLVQ-KKLKEGQEVRRVAQLDWKIIEEDCDKPFVASGL 198
+ + QF S+ TK Y ++ L+EG ++ V++ +++ E D + G
Sbjct: 91 YGPAGIEQFVKTSLRISKTKISYPIKFVTLEEGGKI--VSERGFEVYTEKLDHRIDSWGF 148
Query: 199 KFV 201
+ V
Sbjct: 149 RMV 151
>sp|B1LUE9|PQQB_METRJ Coenzyme PQQ synthesis protein B OS=Methylobacterium radiotolerans
(strain ATCC 27329 / DSM 1819 / JCM 2831) GN=pqqB PE=3
SV=1
Length = 299
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 22/120 (18%)
Query: 24 LIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKH 83
++ LG+ LP C C +C A S P + P + + ++ D +
Sbjct: 3 VVILGSAAGGGLPQWNCR-------CPICTLARSEPDRVRPRTQSSIAVSADGSD----- 50
Query: 84 SYILIDVGKTFREQILRWFTFHKIPR-------VDSIILTHEHADAVLGLDDIRAVQPYS 136
++LI+ R+Q+ H PR + +++LT+ D V GL +R QPY+
Sbjct: 51 -WLLINASPDIRQQLFDNPQMH--PREGLRHSPIRAVLLTNGDVDHVAGLLTLREGQPYT 107
>sp|Q8DZ99|RNZ_STRA5 Ribonuclease Z OS=Streptococcus agalactiae serotype V (strain ATCC
BAA-611 / 2603 V/R) GN=rnz PE=3 SV=1
Length = 309
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 26/142 (18%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K +V I +TH H D V GL RA Q D+D
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDI 92
Query: 144 -TPIFLSQFAMESIST---KFPYLVQ---------KKLKEGQEVRRVAQ--------LDW 182
P+ + F M ++ T + PY + K+ E + A+ + +
Sbjct: 93 YGPVGIKSFVMTALRTSGSRLPYRIHFHEFDESSLGKIMETDKFTVYAEKLDHTIFCMGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP 204
+++++D + A LK +P
Sbjct: 153 RVVQKDLEGTLDAEALKLAGVP 174
>sp|Q8E4W1|RNZ_STRA3 Ribonuclease Z OS=Streptococcus agalactiae serotype III (strain
NEM316) GN=rnz PE=3 SV=1
Length = 309
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K +V I +TH H D V GL RA Q D+D
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDI 92
Query: 144 -TPIFLSQFAMESIST---KFPYLVQ---------KKLKEGQEVRRVAQ--------LDW 182
P+ + F M + T + PY + K+ E + A+ + +
Sbjct: 93 YGPVGIKSFVMTGLRTSGSRLPYRIHFHEFDESSLGKIMETDKFTVYAEKLDHTIFCMGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP 204
+++++D + A LK +P
Sbjct: 153 RVVQKDLEGTLDAEALKLAGVP 174
>sp|Q3K0P4|RNZ_STRA1 Ribonuclease Z OS=Streptococcus agalactiae serotype Ia (strain ATCC
27591 / A909 / CDC SS700) GN=rnz PE=3 SV=1
Length = 309
Score = 37.4 bits (85), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K +V I +TH H D V GL RA Q D+D
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKVKKIFITHMHGDHVFGLPGFLSSRAFQANEEQTDLDI 92
Query: 144 -TPIFLSQFAMESIST---KFPYLVQ---------KKLKEGQEVRRVAQ--------LDW 182
P+ + F M + T + PY + K+ E + A+ + +
Sbjct: 93 YGPVGIKSFVMTGLRTSGSRLPYRIHFHEFDESSLGKIMETDKFTVYAEKLDHTIFCMGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP 204
+++++D + A LK +P
Sbjct: 153 RVVQKDLEGTLDAEALKLAGVP 174
>sp|Q5UZJ9|RNZ_HALMA Ribonuclease Z OS=Haloarcula marismortui (strain ATCC 43049 / DSM
3752 / JCM 8966 / VKM B-1809) GN=rnz PE=3 SV=1
Length = 311
Score = 37.0 bits (84), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 64 PNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAV 123
P + NTS + + +GD Y+L D G+ + Q++R+ T I D + +TH H D V
Sbjct: 15 PTTQRNTSSIFVNRDGD----YLLFDCGEGTQRQMMRYGTGFAI---DHLFVTHLHGDHV 67
Query: 124 LGL 126
LG+
Sbjct: 68 LGI 70
>sp|Q6N8F6|PQQB_RHOPA Coenzyme PQQ synthesis protein B OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=pqqB PE=3 SV=1
Length = 308
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 24 LIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKH 83
+I LG +P C C VC AL P R SL I D H
Sbjct: 4 VIVLGAAAGGGVPQWNC-------GCPVCRAALDDPRL----ARTQASLAI---SADNAH 49
Query: 84 SYILIDVGKTFREQILRWFTFHKIPR--------VDSIILTHEHADAVLGLDDIRAVQPY 135
+ LI+ R+QI+ H PR + +ILT+ DAV GL +R P+
Sbjct: 50 -WFLINASPDLRQQIVATPQLH--PRAGALRHSPIAGVILTNGEVDAVAGLLSMREGSPF 106
Query: 136 S 136
S
Sbjct: 107 S 107
>sp|Q03QP5|RNZ_LACBA Ribonuclease Z OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170)
GN=rnz PE=3 SV=1
Length = 317
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 80 DGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL 126
D ++S L DVG+ + QILR T K ++D I +TH H D + GL
Sbjct: 28 DERNSVWLFDVGEATQHQILR--TTLKPRKIDKIFITHLHGDHIFGL 72
>sp|A8YV16|RNZ_LACH4 Ribonuclease Z OS=Lactobacillus helveticus (strain DPC 4571) GN=rnz
PE=3 SV=1
Length = 312
Score = 36.2 bits (82), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
L DVG+ + QILR T ++ +V I ++H H D + GL + + + + D+ P I
Sbjct: 35 LFDVGEATQHQILR--TNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQG--DVGPLTI 90
Query: 147 F----LSQFAMESIS---TKFPYLVQ 165
+ + QF S+ TK Y ++
Sbjct: 91 YGPPGIEQFVKVSLKVSRTKVSYPIK 116
>sp|P87168|RNZ2_SCHPO Ribonuclease Z 2, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=trz2 PE=3 SV=1
Length = 678
Score = 36.2 bits (82), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 25/245 (10%)
Query: 86 ILIDVGKTFREQILRWFTFHKIP---RVDSIILTHEHADAVLGLDDIRAVQPYSATNDID 142
I++D G+ Q R + + P ++ +I +TH H+D LGL + +Q ++ N +
Sbjct: 438 IMLDCGEGAISQFFRQYGTNTEPMLRKLKAIFITHLHSDHYLGL--LNVLQAWNKANTNN 495
Query: 143 PTPIFLSQFAMESISTKFPYLVQKKLKEGQEVRR-VAQLDWKIIEEDCDKPF-VASGLKF 200
I + I KF + ++LK ++ + ++ + I +E P + S L
Sbjct: 496 SMHINI-------IGPKFLWQWLQRLKSPANLQALLNRIIFIIAKETVTTPLQLTSDLSI 548
Query: 201 VPLPVMHGED-YVCLGFLFGEKCRVAYISDVSRIPPTTEYVISKSGAGQL--DLLILDTL 257
+P +H D Y C+ + ++ Y D P + V + GA L + D L
Sbjct: 549 SSVPSIHINDSYSCI-ISHTKYGKLVYSGDTR---PNEKLVKAGIGASLLLHESTFEDDL 604
Query: 258 YKDGCHNTHFCFPQTLEAVKRLCPKQALLIGMTHEFDHHKDNEFL-AEWSKREGIPVQLS 316
+ H + L + + K +L TH D +FL +W+ +
Sbjct: 605 KHEAIQRQHSTASEALSVAQSMKAKALIL---THFSQRSYDADFLPPDWTIYPKSKTIYA 661
Query: 317 HDGLR 321
+DGL+
Sbjct: 662 NDGLQ 666
>sp|Q8DT90|RNZ_STRMU Ribonuclease Z OS=Streptococcus mutans serotype c (strain ATCC
700610 / UA159) GN=rnz PE=3 SV=1
Length = 309
Score = 35.8 bits (81), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 33/158 (20%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K ++ I +TH H D V GL RA Q D+D
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKIRKIFITHLHGDHVFGLPGFLSSRAFQANDEQTDVDI 92
Query: 144 -TPIFLSQFAMESISTK---FPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + M SI T PY + + + + ++ + D +
Sbjct: 93 YGPVGIKHLVMASIRTSGAHLPYHIHFHEFDAKHLGKILETDKFMVYAEKLDHTIFCVGY 152
Query: 183 KIIEEDCD-----KPFVASGLKFVPL--PVMHGEDYVC 213
+++++D + + A+GL F PL V +G+D V
Sbjct: 153 RVVQKDLEGTLDAEKLKAAGLPFGPLFGRVKNGQDVVL 190
>sp|Q03W55|RNZ_LEUMM Ribonuclease Z OS=Leuconostoc mesenteroides subsp. mesenteroides
(strain ATCC 8293 / NCDO 523) GN=rnz PE=3 SV=1
Length = 318
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 80 DGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATN 139
D +++ L DVG+ + QIL+ T + +V+ I +TH H D + GL + + + +
Sbjct: 28 DERNAVWLFDVGEATQHQILK--TTLRPRKVEKIFITHLHGDHIFGLPGFLSSRSFQGAD 85
Query: 140 DIDPTPIFLSQFAMESIST 158
+P I+ + E + T
Sbjct: 86 KNEPLTIYGPKGVKEFVQT 104
>sp|Q89NF8|RNZ_BRAJA Ribonuclease Z OS=Bradyrhizobium japonicum (strain USDA 110) GN=rnz
PE=3 SV=1
Length = 301
Score = 35.4 bits (80), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 67 RCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL 126
R + +LL+ E GK ILID G+ + Q+LR + R+D I+LTH H D VLG+
Sbjct: 18 RNHPALLV---EAAGKR--ILIDCGEGTQRQLLRSGAGFR--RLDRILLTHAHLDHVLGI 70
Query: 127 DDIRAVQPYSATNDI 141
+ + ++D+
Sbjct: 71 PGLFSTLGLRQSSDV 85
>sp|O43813|LANC1_HUMAN LanC-like protein 1 OS=Homo sapiens GN=LANCL1 PE=1 SV=1
Length = 399
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Query: 41 LLQPS-DPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQ 97
L++PS D CQ+ FP+ + PP + N LL+ C G Y+LI K FRE+
Sbjct: 243 LVKPSVDYVCQLKFPSGNYPPCIGDN----RDLLVHWCHGAPGVIYMLIQAYKVFREE 296
>sp|Q5FKH3|RNZ_LACAC Ribonuclease Z OS=Lactobacillus acidophilus (strain ATCC 700396 /
NCK56 / N2 / NCFM) GN=rnz PE=3 SV=1
Length = 312
Score = 35.4 bits (80), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
L DVG+ + QILR T ++ +V I ++H H D + GL + + + + D+ P I
Sbjct: 35 LFDVGEATQHQILR--TNIRLRKVTKIFISHNHGDHIFGLPGLLSTRSFQG--DVGPLTI 90
Query: 147 F 147
+
Sbjct: 91 Y 91
>sp|Q3IRM5|RNZ_NATPD Ribonuclease Z OS=Natronomonas pharaonis (strain DSM 2160 / ATCC
35678) GN=rnz PE=3 SV=1
Length = 308
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
Query: 64 PNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAV 123
P R NTS + EGD +L D G+ + Q++R+ T + + +TH H D +
Sbjct: 15 PTTRRNTSAVFLRREGD----RMLFDCGEGTQRQMMRFGTGFAVSKA---FITHLHGDHI 67
Query: 124 LGL 126
LGL
Sbjct: 68 LGL 70
>sp|B3QBS9|PQQB_RHOPT Coenzyme PQQ synthesis protein B OS=Rhodopseudomonas palustris
(strain TIE-1) GN=pqqB PE=3 SV=1
Length = 308
Score = 35.0 bits (79), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 24 LIFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKH 83
+I LG +P C C VC A P L R SL I D H
Sbjct: 4 VIVLGAAAGGGVPQWNC-------GCPVCRAAFD-DPRL---ARTQASLAI---SADNAH 49
Query: 84 SYILIDVGKTFREQILRWFTFHKIPR--------VDSIILTHEHADAVLGLDDIRAVQPY 135
+ LI+ R+QI+ H PR + +ILT+ DAV GL +R P+
Sbjct: 50 -WFLINASPDLRQQIIATPQLH--PRAGALRHSPIAGVILTNGEVDAVAGLLSMREGAPF 106
Query: 136 S 136
S
Sbjct: 107 S 107
>sp|Q8CSG7|RNZ_STAES Ribonuclease Z OS=Staphylococcus epidermidis (strain ATCC 12228)
GN=rnz PE=3 SV=1
Length = 306
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL 126
L DVG+ + QILR K+ ++D I +TH H D + GL
Sbjct: 35 LFDVGEGTQHQILRHSI--KLGKIDHIFITHMHGDHIFGL 72
>sp|Q5HP47|RNZ_STAEQ Ribonuclease Z OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=rnz PE=3 SV=1
Length = 306
Score = 34.7 bits (78), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL 126
L DVG+ + QILR K+ ++D I +TH H D + GL
Sbjct: 35 LFDVGEGTQHQILRHSI--KLGKIDHIFITHMHGDHIFGL 72
>sp|B1MZQ4|RNZ_LEUCK Ribonuclease Z OS=Leuconostoc citreum (strain KM20) GN=rnz PE=3
SV=1
Length = 322
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 80 DGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATN 139
D +++ L DVG+ + QIL+ T + +V+ I ++H H D + GL + + + +
Sbjct: 28 DERNAVWLFDVGEATQHQILK--TTLRPRKVEKIFISHLHGDHIFGLPGFLSSRSFQGAD 85
Query: 140 DIDPTPIFLSQFAMESIST 158
+P I+ + E + T
Sbjct: 86 KNEPLTIYGPKGVKEFVQT 104
>sp|Q89FG4|PQQB_BRAJA Coenzyme PQQ synthesis protein B OS=Bradyrhizobium japonicum
(strain USDA 110) GN=pqqB PE=3 SV=1
Length = 309
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 49 CQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIP 108
C+ C A +I L R S+ GDG+H + LI+ R+Q+ H P
Sbjct: 22 CEGCRTARAIGDEL---LRTQASVAF---SGDGEH-WFLINASPDLRQQLNATPQLHPKP 74
Query: 109 R------VDSIILTHEHADAVLGLDDIRAVQPYS 136
V +ILT+ DAV GL +R P++
Sbjct: 75 GALRHTPVAGVILTNGEVDAVAGLLSMREGSPFT 108
>sp|B8ITW0|PQQB_METNO Coenzyme PQQ synthesis protein B OS=Methylobacterium nodulans
(strain ORS2060 / LMG 21967) GN=pqqB PE=3 SV=1
Length = 299
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 24/126 (19%)
Query: 25 IFLGTGCSSALPNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHS 84
I LG+ +P C C +C A + + P R +SL + DG+
Sbjct: 4 IILGSAAGGGVPQWNCR-------CPICAMAWAGDRRVLP--RTQSSLAVSP---DGER- 50
Query: 85 YILIDVGKTFREQILRWFTFHKIPR-------VDSIILTHEHADAVLGLDDIRAVQPYS- 136
++L++ R+Q+L H PR +++++LT+ D V GL +R QP+
Sbjct: 51 WLLVNASPDIRQQLLATPALH--PRHGLRHTPIEAVLLTNGDVDHVAGLLTLRESQPFRL 108
Query: 137 -ATNDI 141
AT +I
Sbjct: 109 HATRNI 114
>sp|Q4L6K4|RNZ_STAHJ Ribonuclease Z OS=Staphylococcus haemolyticus (strain JCSC1435)
GN=rnz PE=3 SV=1
Length = 306
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATND 140
L DVG+ + QIL K+ +VD I +TH H D + GL + + + D
Sbjct: 35 LFDVGEGTQHQILHHSI--KLGKVDHIFITHMHGDHIFGLPGLLTSRSFQGGED 86
>sp|Q03K89|RNZ_STRTD Ribonuclease Z OS=Streptococcus thermophilus (strain ATCC BAA-491 /
LMD-9) GN=rnz PE=3 SV=1
Length = 309
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 33/157 (21%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K +V I +TH H D + GL R+ Q D++
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEV 92
Query: 144 -TPIFLSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + Q+ M SI T+ Y V K + + V + D +
Sbjct: 93 YGPVGIKQYVMTSIRTSGTRLSYHVHFKEIDENSLGLVMEDDKFAVYADKLDHTIFCVGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP-------VMHGEDYV 212
+++++D + A LK +P + +G+D V
Sbjct: 153 RVVQKDLEGTLDAEALKAAGVPFGPLFGQIKNGQDVV 189
>sp|Q5M3Y3|RNZ_STRT2 Ribonuclease Z OS=Streptococcus thermophilus (strain ATCC BAA-250 /
LMG 18311) GN=rnz PE=3 SV=1
Length = 309
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 33/157 (21%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K +V I +TH H D + GL R+ Q D++
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEV 92
Query: 144 -TPIFLSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + Q+ M SI T+ Y V K + + V + D +
Sbjct: 93 YGPVGIKQYVMTSIRTSGTRLSYHVHFKEIDENSLGLVMEDDKFAVYADKLDHTIFCVGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP-------VMHGEDYV 212
+++++D + A LK +P + +G+D V
Sbjct: 153 RVVQKDLEGTLDAEALKAAGVPFGPLFGQIKNGQDVV 189
>sp|Q5LZD1|RNZ_STRT1 Ribonuclease Z OS=Streptococcus thermophilus (strain CNRZ 1066)
GN=rnz PE=3 SV=1
Length = 309
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 64/157 (40%), Gaps = 33/157 (21%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K +V I +TH H D + GL R+ Q D++
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKVKKIFITHMHGDHIFGLPGFLASRSFQSSEEQTDLEV 92
Query: 144 -TPIFLSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + Q+ M SI T+ Y V K + + V + D +
Sbjct: 93 YGPVGIKQYVMTSIRTSGTRLSYHVHFKEIDENSLGLVMEDDKFAVYADKLDHTIFCVGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP-------VMHGEDYV 212
+++++D + A LK +P + +G+D V
Sbjct: 153 RVVQKDLEGTLDAEALKAAGVPFGPLFGQIKNGQDVV 189
>sp|A8AWX4|RNZ_STRGC Ribonuclease Z OS=Streptococcus gordonii (strain Challis / ATCC
35105 / CH1 / DL1 / V288) GN=rnz PE=3 SV=1
Length = 309
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 48/250 (19%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
+ D G+ + QIL T K ++ I +TH H D + GL + + + A + I
Sbjct: 35 MFDCGEGTQHQILE--TTIKPRKISKIFITHLHGDHIFGLPGFLSSRSFQANEEQTDIEI 92
Query: 147 F----LSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
+ + F M S+ ++ PY + + + ++ + D +
Sbjct: 93 YGPKGIKNFVMSSLRVSGSRLPYRIDFHEFDENSLGKILETDKFTVYADKLDHTIFCVGY 152
Query: 183 KIIEEDCD-----KPFVASGLKFVPL--PVMHGEDYVCLGFLFGEKCRVA-YIS------ 228
+I+++D + A+G+ F PL V +G+D V G G K A YIS
Sbjct: 153 RIMQKDLEGTLDADKLRAAGVPFGPLFGKVKNGQDIVLEG---GTKIIAADYISAPRPGK 209
Query: 229 DVSRIPPTTEYVISKSGAGQLDLLILDTLYKDGCHNT-----HFCFPQTLEAVKRLCPKQ 283
++ + T + S A D+L+ + Y G H Q E K KQ
Sbjct: 210 TITILGDTRKTDSSVRLAVAADVLVHEATYGKGDEKMARKHGHSTNMQAAEVAKEAGVKQ 269
Query: 284 ALLIGMTHEF 293
LL ++ F
Sbjct: 270 LLLNHVSARF 279
>sp|Q1WT50|RNZ_LACS1 Ribonuclease Z OS=Lactobacillus salivarius (strain UCC118) GN=rnz
PE=3 SV=1
Length = 317
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
L DVG+ + QIL T + ++D I +TH H D + GL + + + + P I
Sbjct: 35 LFDVGEGTQHQILN--TTIRPRKIDKIFITHMHGDHIFGLPGFLSSRSFQGGEKMGPLTI 92
Query: 147 F 147
+
Sbjct: 93 Y 93
>sp|Q0RUR2|G6PI4_RHOSR Glucose-6-phosphate isomerase 4 OS=Rhodococcus sp. (strain RHA1)
GN=pgi4 PE=3 SV=1
Length = 559
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 86 ILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL----------DDIRAVQPY 135
+++ +GK E+ L FH I R + ++A A+L L + RA+ PY
Sbjct: 282 VMVAIGKDSFEEFLD--GFHTIDRHFADTPLEDNAPAILALLGVWYSNFFGAETRAILPY 339
Query: 136 SATNDIDPTPIFLSQFAMES 155
S ND+ P +L Q AMES
Sbjct: 340 S--NDLGRFPAYLQQLAMES 357
>sp|B9DUP5|RNZ_STRU0 Ribonuclease Z OS=Streptococcus uberis (strain ATCC BAA-854 /
0140J) GN=rnz PE=3 SV=1
Length = 309
Score = 33.1 bits (74), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 65/157 (41%), Gaps = 33/157 (21%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K ++ I +TH H D + GL RA Q DI+
Sbjct: 35 MFDCGEGTQRQILE--TSIKPRKIQKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDIEI 92
Query: 144 -TPIFLSQFAMESIS---TKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + F S++ T+ PY + +++ ++ + D +
Sbjct: 93 FGPLGIKSFVQNSLAISGTRLPYKIHFHEFTDKDMGKIMETDKFLVYAEKLAHTIFCMGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP-------VMHGEDYV 212
+++++D + A LK +P + +G+D V
Sbjct: 153 RVVQKDLEGTLDAEALKKAGVPFGPLFGKIKNGQDIV 189
>sp|Q97IQ6|RNZ_CLOAB Ribonuclease Z OS=Clostridium acetobutylicum (strain ATCC 824 / DSM
792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=rnz PE=3 SV=2
Length = 309
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 83/201 (41%), Gaps = 45/201 (22%)
Query: 67 RCNTSLLIDHCEGDGKHSYILIDVGKTFREQI--LRWFTFHKIPRVDSIILTHEHADAVL 124
R TSLLI + +G+ ILID G+ + + + W +D I TH HAD V+
Sbjct: 18 RNLTSLLISY---NGRK--ILIDCGEGTQVSMKEIAW----GFKDIDVICFTHYHADHVM 68
Query: 125 GLDDIRAVQPYSATNDIDPTPIFLSQFAMESISTK------FPYLVQKKLKEGQEVRRVA 178
GL + + + + IDP I + E + FPY ++ +
Sbjct: 69 GLTGL--LLTIANSGRIDPLTIIGPEGLREVVKGLTVVAPFFPYEIE-----------LI 115
Query: 179 QLDWKIIEEDCDKPFVASGLKFVPLPVMHGEDYVCLGFLFGEKCRVAYISDVSRIPPTTE 238
+LD K + DK F ++ LPV H + CL + R+ +
Sbjct: 116 ELDSKCSDNFLDKVFKIEDVEIFALPVDHSIE--CLSYSV-------------RVNRKRK 160
Query: 239 YVISKSGAGQLDLLILDTLYK 259
+ ++K+ A ++ L I + L +
Sbjct: 161 FDVNKAKANEVPLKIWNELQR 181
>sp|C0ZBP8|RNZ_BREBN Ribonuclease Z OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=rnz PE=3 SV=1
Length = 318
Score = 32.7 bits (73), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 64 PNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAV 123
P R N S + GK + L D G+ + Q+LR KI ++D I +TH H D +
Sbjct: 13 PTTRRNVSGIGLRFLQAGK--WWLFDCGEGTQHQLLR--APMKISQLDKIFITHLHGDHL 68
Query: 124 LGLDDIRAVQPYSATNDIDPTPIFL 148
GL + A + + + +PTP+ L
Sbjct: 69 YGLIGLLASR---SLRNTEPTPLEL 90
>sp|Q49XV1|RNZ_STAS1 Ribonuclease Z OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=rnz PE=3 SV=1
Length = 306
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL 126
L DVG+ + QIL K+ +VD I +TH H D + GL
Sbjct: 35 LFDVGEGTQHQILHHSI--KLGKVDHIFITHMHGDHIFGL 72
>sp|B9KYQ3|RNZ_THERP Ribonuclease Z OS=Thermomicrobium roseum (strain ATCC 27502 / DSM
5159 / P-2) GN=rnz PE=3 SV=1
Length = 303
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 71 SLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIR 130
S L+ CEG +L+D G+ QI +T +D+I+ TH HAD V GL I
Sbjct: 21 SALLVRCEGH----VVLLDCGEG--TQISWRYTGWSFRDLDAIVFTHLHADHVAGLPGIL 74
Query: 131 AVQPYSATND----IDPTPIFLSQFAMESISTKFPYLVQ 165
++ + I P A+ SI P+ V+
Sbjct: 75 YALAFADRQEPVRIIGPVGTAQVVAALRSIVPTLPFPVE 113
>sp|C0SEQ8|LCL3_PARBP Probable endonuclease LCL3 OS=Paracoccidioides brasiliensis (strain
Pb03) GN=LCL3 PE=3 SV=1
Length = 342
Score = 32.3 bits (72), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 36 PNTMCLLQPSDPPCQVCFPALSIPPNLNPNYRCNTSLLIDHCEGDGKHSY-----ILIDV 90
P T+ PS PPC C + P+ NP NTSL G+ K +L+
Sbjct: 43 PLTLECPSPSHPPCASCSTKATTSPS-NPKRGWNTSLTARDWAGEFKDPRNLIPTLLLTG 101
Query: 91 GKTFREQILRWFTFHKIPRVDSIILTHEHADAVLG 125
G F +I R + +IP +I T+ H ++ G
Sbjct: 102 GILFCVRIHRQY-LRRIPLATNISPTYFHKRSLFG 135
>sp|Q5XD24|Y554_STRP6 Uncharacterized protein M6_Spy0554 OS=Streptococcus pyogenes
serotype M6 (strain ATCC BAA-946 / MGAS10394)
GN=M6_Spy0554 PE=1 SV=1
Length = 232
Score = 32.0 bits (71), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 74 IDHCEGDGKH------SYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLD 127
I+H G+ + + ILID G +E I + +F K P V +I+LTH H D + LD
Sbjct: 28 INHIAGENTYYLVNDQAVILIDPGSNGQEIISKIKSFEK-PLV-AILLTHTHYDHIFSLD 85
Query: 128 DIRAVQPYSATNDIDPTPIFLSQ 150
+R + D P+++S+
Sbjct: 86 LVR--------DAFDHPPVYVSE 100
>sp|A4VVZ0|RNZ_STRSY Ribonuclease Z OS=Streptococcus suis (strain 05ZYH33) GN=rnz PE=3
SV=1
Length = 309
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
L D G+ + +IL T + +V I +TH H D + GL R+ Q DID
Sbjct: 35 LFDCGEGTQNRILE--TTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDI 92
Query: 144 -TPIFLSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + F + S+ T+ PY + + V +V + D +
Sbjct: 93 YGPVGIRSFVLASLKVSGTRLPYRIHFHEFDVDTVGQVLETDKFTVFAEKLDHTIPCVGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP 204
++I++D + A L+ +P
Sbjct: 153 RVIQKDLEGTLDAEALRAAGVP 174
>sp|A4W299|RNZ_STRS2 Ribonuclease Z OS=Streptococcus suis (strain 98HAH33) GN=rnz PE=3
SV=1
Length = 309
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
L D G+ + +IL T + +V I +TH H D + GL R+ Q DID
Sbjct: 35 LFDCGEGTQNRILE--TTIRPRKVAKIFITHLHGDHIFGLPGFLSSRSFQSSEEQTDIDI 92
Query: 144 -TPIFLSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + F + S+ T+ PY + + V +V + D +
Sbjct: 93 YGPVGIRSFVLASLKVSGTRLPYRIHFHEFDVDTVGQVLETDKFTVFAEKLDHTIPCVGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP 204
++I++D + A L+ +P
Sbjct: 153 RVIQKDLEGTLDAEALRAAGVP 174
>sp|C0MAM9|RNZ_STRE4 Ribonuclease Z OS=Streptococcus equi subsp. equi (strain 4047)
GN=rnz PE=3 SV=1
Length = 309
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 26/142 (18%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDI---RAVQPYSATNDIDP 143
+ D G+ + QIL T K ++ I +TH H D + GL RA Q D++
Sbjct: 35 MFDCGEGTQRQILE--TTIKPRKIKKIFITHLHGDHIFGLPGFLSSRAFQASEEQTDLEI 92
Query: 144 -TPIFLSQFAMESI---STKFPYLVQKKLKEGQEVRRVAQLD-----------------W 182
P+ + + SI +K PY + + + ++ + D +
Sbjct: 93 YGPVGIKSYVTNSIRISGSKLPYQIHYHEFDDTSMGKILETDKFIVYAERLAHTIFCMGY 152
Query: 183 KIIEEDCDKPFVASGLKFVPLP 204
+++++D + A L+ V +P
Sbjct: 153 RVVQKDLEGTLDAEALRAVGVP 174
>sp|B9E6P2|RNZ_MACCJ Ribonuclease Z OS=Macrococcus caseolyticus (strain JCSC5402) GN=rnz
PE=3 SV=1
Length = 306
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 85 YILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPT 144
Y + D G+ + QIL T K+ R+ I ++H H D + GL + + + D T
Sbjct: 33 YWMFDCGEAAQHQILH--TSIKLGRLTHIFISHLHGDHIFGLPGVLTSRSFQGGQDKKLT 90
Query: 145 ---PIFLSQFA 152
P L QF
Sbjct: 91 LYGPTGLKQFV 101
>sp|A4YN80|RNZ_BRASO Ribonuclease Z OS=Bradyrhizobium sp. (strain ORS278) GN=rnz PE=3
SV=1
Length = 301
Score = 31.6 bits (70), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 86 ILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGL 126
IL+D G+ + Q+L + R+D I+LTH H D VLG+
Sbjct: 32 ILVDCGEGIQRQLLASGAGFR--RLDRILLTHGHLDHVLGI 70
>sp|Q21J46|GLO2_SACD2 Hydroxyacylglutathione hydrolase OS=Saccharophagus degradans
(strain 2-40 / ATCC 43961 / DSM 17024) GN=gloB PE=3 SV=1
Length = 272
Score = 31.6 bits (70), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 64 PNYRCNTSLLIDHCEGDGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAV 123
P Y+ N ++ H ++S +++D G +++ + T H++ + SII+TH H D V
Sbjct: 15 PIYQGNYVWVMRHT---SQNSVVVVDPGSA--SEVIEYITQHEL-TIASIIITHSHWDHV 68
Query: 124 LGLDDIRA 131
G+ ++ A
Sbjct: 69 TGIAELCA 76
>sp|A7GSG2|RNZ_BACCN Ribonuclease Z OS=Bacillus cereus subsp. cytotoxis (strain NVH
391-98) GN=rnz PE=3 SV=1
Length = 307
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 26/135 (19%)
Query: 87 LIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATNDIDPTPI 146
L D G+ + QIL T + R++ I +TH H D + GL + + + P +
Sbjct: 35 LFDCGEATQHQILH--TSVRPRRIEKIFITHLHGDHIFGLPGLLGSRSFQGGT--TPLTV 90
Query: 147 F----LSQF-----AMESISTKFPYLVQKKLKEG---------QEVRRVAQ----LDWKI 184
+ + QF ++ + K+P + + +EG E +R++ ++I
Sbjct: 91 YGPKGIEQFIEVALSVSTTHVKYPLEIVEITEEGIVFEDKQFYVETKRLSHGIECFGYRI 150
Query: 185 IEEDCDKPFVASGLK 199
+E+D P + L+
Sbjct: 151 VEKDIQGPLLVEKLR 165
>sp|Q88VG6|RNZ_LACPL Ribonuclease Z OS=Lactobacillus plantarum (strain ATCC BAA-793 /
NCIMB 8826 / WCFS1) GN=rnz PE=3 SV=1
Length = 311
Score = 31.2 bits (69), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 80 DGKHSYILIDVGKTFREQILRWFTFHKIPRVDSIILTHEHADAVLGLDDIRAVQPYSATN 139
D ++ L DVG+ + QILR T K ++ I +TH H D + GL + + + + +
Sbjct: 28 DERNEVWLFDVGEGTQHQILR--TTLKPRKIAKIFITHLHGDHIFGLPGLLSSRSFQGGD 85
Query: 140 D 140
+
Sbjct: 86 E 86
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 129,810,546
Number of Sequences: 539616
Number of extensions: 5634613
Number of successful extensions: 12448
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 12436
Number of HSP's gapped (non-prelim): 57
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)