Query 020428
Match_columns 326
No_of_seqs 298 out of 2796
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 16:42:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020428.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020428hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vhn_A Putative flavin oxidore 100.0 4.8E-53 1.7E-57 395.5 23.0 285 1-308 1-303 (318)
2 3b0p_A TRNA-dihydrouridine syn 100.0 1.8E-51 6.1E-56 389.2 25.9 280 2-308 1-311 (350)
3 1z41_A YQJM, probable NADH-dep 100.0 3.1E-37 1.1E-41 290.6 18.3 240 1-244 14-319 (338)
4 2r14_A Morphinone reductase; H 100.0 3E-37 1E-41 294.0 15.2 239 1-244 20-340 (377)
5 1vyr_A Pentaerythritol tetrani 100.0 4E-36 1.4E-40 285.2 16.5 238 1-244 14-335 (364)
6 2gou_A Oxidoreductase, FMN-bin 100.0 5.8E-36 2E-40 284.2 15.0 238 1-244 14-334 (365)
7 1icp_A OPR1, 12-oxophytodienoa 100.0 1E-35 3.4E-40 283.5 13.5 240 1-244 25-342 (376)
8 3gr7_A NADPH dehydrogenase; fl 100.0 8.4E-35 2.9E-39 273.8 19.0 241 1-244 14-319 (340)
9 2hsa_B 12-oxophytodienoate red 100.0 2.2E-35 7.4E-40 283.2 13.9 238 1-244 27-360 (402)
10 3kru_A NADH:flavin oxidoreduct 100.0 5E-34 1.7E-38 268.3 16.9 242 1-246 13-321 (343)
11 3hgj_A Chromate reductase; TIM 100.0 3.1E-33 1E-37 264.3 19.5 241 1-244 13-330 (349)
12 3l5a_A NADH/flavin oxidoreduct 100.0 1.1E-33 3.6E-38 272.5 16.2 237 1-244 37-358 (419)
13 1ps9_A 2,4-dienoyl-COA reducta 100.0 8.4E-33 2.9E-37 282.3 18.5 241 1-244 14-322 (671)
14 1jub_A Dihydroorotate dehydrog 100.0 1.7E-32 5.8E-37 255.5 18.7 238 1-244 9-284 (311)
15 3l5l_A Xenobiotic reductase A; 100.0 2.9E-32 9.8E-37 258.9 16.5 241 1-244 13-337 (363)
16 4ab4_A Xenobiotic reductase B; 100.0 3.2E-32 1.1E-36 257.4 16.2 232 1-244 13-320 (362)
17 2e6f_A Dihydroorotate dehydrog 100.0 7.4E-32 2.5E-36 251.5 17.9 238 1-244 11-286 (314)
18 1o94_A Tmadh, trimethylamine d 100.0 2E-32 6.8E-37 281.9 14.8 240 1-244 18-333 (729)
19 3gka_A N-ethylmaleimide reduct 100.0 5.8E-32 2E-36 255.6 15.4 232 1-244 21-328 (361)
20 3k30_A Histamine dehydrogenase 100.0 4.7E-32 1.6E-36 277.6 15.5 241 1-244 23-336 (690)
21 4ef8_A Dihydroorotate dehydrog 100.0 1.8E-31 6.3E-36 251.2 17.2 238 1-244 44-319 (354)
22 1f76_A Dihydroorotate dehydrog 100.0 2.9E-31 9.9E-36 249.7 17.2 234 1-244 52-331 (336)
23 3zwt_A Dihydroorotate dehydrog 100.0 1E-30 3.5E-35 247.7 19.9 236 1-244 57-340 (367)
24 3oix_A Putative dihydroorotate 100.0 9.1E-31 3.1E-35 245.8 18.5 235 1-244 45-317 (345)
25 3aty_A Tcoye, prostaglandin F2 100.0 2.6E-30 8.9E-35 246.2 15.0 236 1-244 16-348 (379)
26 1tv5_A Dhodehase, dihydroorota 100.0 1.3E-29 4.4E-34 244.8 19.7 235 1-244 89-415 (443)
27 3i65_A Dihydroorotate dehydrog 100.0 1.8E-29 6.1E-34 240.8 17.5 236 1-244 91-387 (415)
28 3tjl_A NADPH dehydrogenase; OL 100.0 1.4E-30 4.8E-35 248.6 9.7 242 1-244 23-358 (407)
29 1ep3_A Dihydroorotate dehydrog 100.0 1.3E-29 4.4E-34 235.6 13.9 236 1-244 14-282 (311)
30 1gte_A Dihydropyrimidine dehyd 100.0 2.1E-27 7.3E-32 252.4 22.5 238 2-243 541-828 (1025)
31 4a3u_A NCR, NADH\:flavin oxido 99.9 1.6E-26 5.3E-31 219.0 14.9 240 1-244 13-327 (358)
32 2nli_A Lactate oxidase; flavoe 99.9 5.6E-26 1.9E-30 215.6 15.4 205 2-238 78-319 (368)
33 2nzl_A Hydroxyacid oxidase 1; 99.9 5.1E-25 1.7E-29 210.4 13.7 205 2-239 92-343 (392)
34 1p0k_A Isopentenyl-diphosphate 99.9 9.2E-24 3.2E-28 199.5 18.0 207 2-239 53-287 (349)
35 4gbu_A NADPH dehydrogenase 1; 99.9 2.3E-24 7.9E-29 206.9 13.1 241 1-244 26-360 (400)
36 1gox_A (S)-2-hydroxy-acid oxid 99.9 1.2E-23 4.2E-28 200.0 17.9 203 2-238 69-315 (370)
37 3tjx_A Dihydroorotate dehydrog 99.9 1.1E-22 3.9E-27 192.4 18.4 238 1-244 44-319 (354)
38 1kbi_A Cytochrome B2, L-LCR; f 99.9 7.9E-23 2.7E-27 201.3 17.5 207 2-239 187-439 (511)
39 2z6i_A Trans-2-enoyl-ACP reduc 99.9 6.7E-23 2.3E-27 192.3 15.4 190 2-242 10-201 (332)
40 1vcf_A Isopentenyl-diphosphate 99.9 1.4E-21 4.9E-26 183.3 13.7 206 2-239 56-292 (332)
41 3bo9_A Putative nitroalkan dio 99.8 1.4E-20 4.7E-25 176.1 16.6 189 2-241 24-214 (326)
42 1p4c_A L(+)-mandelate dehydrog 99.8 2.5E-20 8.5E-25 177.7 15.5 202 2-238 70-313 (380)
43 2gjl_A Hypothetical protein PA 99.8 1.2E-19 4.2E-24 169.8 16.0 188 2-240 13-209 (328)
44 3bw2_A 2-nitropropane dioxygen 99.8 1.3E-19 4.6E-24 172.2 16.3 191 4-243 10-248 (369)
45 1ypf_A GMP reductase; GUAC, pu 99.8 1.4E-19 4.8E-24 169.9 14.7 191 2-238 44-245 (336)
46 1mzh_A Deoxyribose-phosphate a 99.8 4.3E-19 1.5E-23 157.5 11.4 182 8-234 12-206 (225)
47 3vkj_A Isopentenyl-diphosphate 99.8 5.5E-19 1.9E-23 167.2 12.7 206 2-237 57-301 (368)
48 1eep_A Inosine 5'-monophosphat 99.8 8E-18 2.7E-22 161.8 15.6 218 2-243 40-296 (404)
49 3khj_A Inosine-5-monophosphate 99.7 5.3E-17 1.8E-21 153.4 15.8 193 2-241 43-245 (361)
50 3sr7_A Isopentenyl-diphosphate 99.7 3.7E-17 1.3E-21 154.2 13.6 206 2-237 84-312 (365)
51 2agk_A 1-(5-phosphoribosyl)-5- 99.7 5.9E-18 2E-22 153.2 7.1 149 77-244 76-251 (260)
52 3sgz_A Hydroxyacid oxidase 2; 99.7 9E-17 3.1E-21 150.5 14.9 206 3-240 68-309 (352)
53 3r2g_A Inosine 5'-monophosphat 99.7 4.9E-16 1.7E-20 146.0 16.2 188 2-239 40-235 (361)
54 2y88_A Phosphoribosyl isomeras 99.7 3.8E-16 1.3E-20 139.7 13.7 152 74-244 73-237 (244)
55 1jvn_A Glutamine, bifunctional 99.7 2.5E-16 8.6E-21 156.9 11.2 166 77-244 327-538 (555)
56 3ffs_A Inosine-5-monophosphate 99.6 6.3E-15 2.2E-19 140.4 18.2 213 2-240 40-283 (400)
57 2qr6_A IMP dehydrogenase/GMP r 99.6 6.7E-16 2.3E-20 147.9 11.0 218 2-240 65-314 (393)
58 4fo4_A Inosine 5'-monophosphat 99.6 2.1E-15 7.3E-20 142.4 12.1 192 2-240 44-248 (366)
59 1vzw_A Phosphoribosyl isomeras 99.6 6.6E-15 2.2E-19 131.8 14.1 153 74-244 74-234 (244)
60 2yzr_A Pyridoxal biosynthesis 99.6 1.3E-15 4.5E-20 139.6 8.4 140 91-238 27-277 (330)
61 3o07_A Pyridoxine biosynthesis 99.6 3.1E-14 1.1E-18 127.0 15.9 145 77-239 13-236 (291)
62 3tdn_A FLR symmetric alpha-bet 99.6 5.3E-16 1.8E-20 139.3 4.4 153 73-245 77-242 (247)
63 1ka9_F Imidazole glycerol phos 99.6 5.2E-14 1.8E-18 126.3 15.6 152 73-244 73-237 (252)
64 1thf_D HISF protein; thermophI 99.5 7.3E-14 2.5E-18 125.5 14.8 150 74-243 73-235 (253)
65 2c6q_A GMP reductase 2; TIM ba 99.5 2.3E-13 7.7E-18 128.2 17.6 192 2-239 55-259 (351)
66 1qo2_A Molecule: N-((5-phospho 99.5 3.7E-14 1.3E-18 126.8 10.9 148 75-242 73-233 (241)
67 2qjg_A Putative aldolase MJ040 99.5 2.6E-13 9E-18 123.4 14.8 193 3-242 32-247 (273)
68 2w6r_A Imidazole glycerol phos 99.5 1.9E-13 6.6E-18 123.6 13.2 152 73-244 72-241 (266)
69 1h5y_A HISF; histidine biosynt 99.5 6.8E-13 2.3E-17 118.4 14.4 148 75-241 77-236 (253)
70 4avf_A Inosine-5'-monophosphat 99.4 1.9E-12 6.6E-17 127.1 13.2 134 84-239 225-368 (490)
71 1jcn_A Inosine monophosphate d 99.4 5.1E-12 1.7E-16 124.9 15.2 136 87-244 254-399 (514)
72 1y0e_A Putative N-acetylmannos 99.4 2.2E-12 7.4E-17 113.7 11.2 155 78-241 9-212 (223)
73 4fxs_A Inosine-5'-monophosphat 99.4 2.5E-12 8.4E-17 126.4 12.2 134 84-239 227-370 (496)
74 2pgw_A Muconate cycloisomerase 99.3 2.2E-11 7.6E-16 116.0 17.2 144 77-244 138-283 (384)
75 3q58_A N-acetylmannosamine-6-p 99.3 4E-12 1.4E-16 112.7 10.7 122 96-243 97-220 (229)
76 2nv1_A Pyridoxal biosynthesis 99.3 2.5E-11 8.4E-16 112.2 16.3 150 76-239 22-245 (305)
77 3tdn_A FLR symmetric alpha-bet 99.3 2.8E-12 9.5E-17 114.9 9.0 97 146-244 22-120 (247)
78 1wv2_A Thiazole moeity, thiazo 99.3 3.5E-10 1.2E-14 100.2 21.6 200 2-237 17-221 (265)
79 3igs_A N-acetylmannosamine-6-p 99.3 7.3E-12 2.5E-16 111.3 10.9 120 96-241 97-218 (232)
80 1yxy_A Putative N-acetylmannos 99.3 1.4E-11 4.8E-16 109.3 11.4 154 75-237 17-220 (234)
81 2uva_G Fatty acid synthase bet 99.3 2.7E-11 9.3E-16 134.9 14.6 193 4-238 582-801 (2060)
82 1mdl_A Mandelate racemase; iso 99.2 1.5E-10 5.2E-15 109.2 15.5 141 77-240 135-278 (359)
83 2ovl_A Putative racemase; stru 99.2 2.2E-10 7.6E-15 108.6 15.2 135 86-243 146-283 (371)
84 2rdx_A Mandelate racemase/muco 99.2 2.8E-10 9.6E-15 108.2 15.0 137 77-240 136-275 (379)
85 3usb_A Inosine-5'-monophosphat 99.2 1.1E-10 3.9E-15 115.0 11.9 130 87-239 255-395 (511)
86 1xg4_A Probable methylisocitra 99.2 2.3E-10 7.9E-15 104.7 12.7 206 13-236 22-239 (295)
87 1xm3_A Thiazole biosynthesis p 99.2 1.2E-09 4.2E-14 98.8 17.0 199 2-239 10-214 (264)
88 1vrd_A Inosine-5'-monophosphat 99.1 2E-10 6.7E-15 113.0 12.4 132 90-243 238-380 (494)
89 2nql_A AGR_PAT_674P, isomerase 99.1 4.7E-10 1.6E-14 107.0 14.3 139 77-240 154-296 (388)
90 2qdd_A Mandelate racemase/muco 99.1 7.4E-10 2.5E-14 105.2 15.0 141 76-243 135-278 (378)
91 1rvk_A Isomerase/lactonizing e 99.1 2.7E-09 9.1E-14 101.5 18.6 138 85-239 148-289 (382)
92 1qo2_A Molecule: N-((5-phospho 99.1 4.9E-11 1.7E-15 106.3 5.7 96 146-244 13-114 (241)
93 3eez_A Putative mandelate race 99.1 5.6E-10 1.9E-14 106.1 13.3 141 76-243 135-278 (378)
94 2p8b_A Mandelate racemase/muco 99.1 9.5E-10 3.3E-14 104.1 14.2 141 76-240 131-275 (369)
95 2hzg_A Mandelate racemase/muco 99.1 2.5E-09 8.6E-14 102.4 16.2 145 76-241 134-286 (401)
96 4gj1_A 1-(5-phosphoribosyl)-5- 99.1 2.6E-09 8.9E-14 95.4 15.1 142 77-238 75-230 (243)
97 3ozy_A Putative mandelate race 99.1 3E-09 1E-13 101.4 16.3 139 76-238 139-283 (389)
98 1geq_A Tryptophan synthase alp 99.1 3.1E-09 1.1E-13 94.9 14.8 155 77-238 6-226 (248)
99 1tkk_A Similar to chloromucona 99.1 5E-09 1.7E-13 99.0 17.0 140 77-239 131-275 (366)
100 1ofd_A Ferredoxin-dependent gl 99.0 6E-09 2E-13 111.9 19.1 109 126-238 1010-1134(1520)
101 2qgy_A Enolase from the enviro 99.0 4.9E-09 1.7E-13 100.0 15.8 133 84-239 147-282 (391)
102 2ps2_A Putative mandelate race 99.0 5.4E-09 1.8E-13 99.0 16.0 137 76-239 136-276 (371)
103 1nu5_A Chloromuconate cycloiso 99.0 9.1E-09 3.1E-13 97.4 17.5 136 81-239 137-276 (370)
104 1ea0_A Glutamate synthase [NAD 99.0 3.5E-09 1.2E-13 113.4 15.8 108 126-237 975-1098(1479)
105 2gl5_A Putative dehydratase pr 99.0 5.5E-09 1.9E-13 100.2 15.9 139 86-232 150-299 (410)
106 2uv8_G Fatty acid synthase sub 99.0 8.2E-10 2.8E-14 122.6 11.3 193 4-238 589-808 (2051)
107 1wa3_A 2-keto-3-deoxy-6-phosph 99.0 1.6E-09 5.4E-14 94.0 10.2 137 76-237 10-183 (205)
108 4adt_A Pyridoxine biosynthetic 99.0 3.6E-08 1.2E-12 90.2 18.0 51 188-239 193-245 (297)
109 2zbt_A Pyridoxal biosynthesis 99.0 1.4E-08 4.8E-13 93.2 15.3 151 75-238 21-244 (297)
110 2poz_A Putative dehydratase; o 98.9 6.7E-09 2.3E-13 99.1 13.3 141 84-232 135-280 (392)
111 1thf_D HISF protein; thermophI 98.9 9.3E-10 3.2E-14 98.5 6.3 86 157-244 30-115 (253)
112 3zen_D Fatty acid synthase; tr 98.9 1.1E-09 3.9E-14 125.4 8.1 194 4-239 427-653 (3089)
113 2ox4_A Putative mandelate race 98.9 1.3E-08 4.5E-13 97.4 14.3 137 86-233 146-291 (403)
114 2qde_A Mandelate racemase/muco 98.9 2.2E-08 7.5E-13 95.7 15.8 136 77-236 136-274 (397)
115 2og9_A Mandelate racemase/muco 98.9 1.7E-08 5.9E-13 96.3 14.6 125 86-233 162-289 (393)
116 3rcy_A Mandelate racemase/muco 98.9 3.2E-08 1.1E-12 95.6 16.6 142 85-238 145-290 (433)
117 3stp_A Galactonate dehydratase 98.9 3.1E-08 1.1E-12 95.0 15.9 143 77-236 169-315 (412)
118 2oz8_A MLL7089 protein; struct 98.9 5.4E-08 1.8E-12 92.7 17.5 123 86-232 145-273 (389)
119 1ka9_F Imidazole glycerol phos 98.9 1.5E-09 5E-14 97.1 5.8 86 157-244 31-116 (252)
120 1qop_A Tryptophan synthase alp 98.9 6.2E-08 2.1E-12 87.7 16.5 155 77-238 18-240 (268)
121 1rd5_A Tryptophan synthase alp 98.9 1.6E-08 5.6E-13 91.1 12.5 154 77-238 19-236 (262)
122 2qq6_A Mandelate racemase/muco 98.9 4.2E-08 1.4E-12 94.1 15.7 134 86-232 149-291 (410)
123 3vnd_A TSA, tryptophan synthas 98.9 3.7E-08 1.3E-12 88.9 14.3 155 76-237 18-240 (267)
124 2pp0_A L-talarate/galactarate 98.9 3.7E-08 1.3E-12 94.2 15.1 124 86-232 175-301 (398)
125 2o56_A Putative mandelate race 98.9 4.1E-08 1.4E-12 94.0 15.1 136 86-232 152-296 (407)
126 1tzz_A Hypothetical protein L1 98.8 5.4E-08 1.8E-12 92.8 15.6 125 86-233 165-296 (392)
127 2gdq_A YITF; mandelate racemas 98.8 4.9E-08 1.7E-12 92.8 15.0 125 85-232 135-266 (382)
128 3rr1_A GALD, putative D-galact 98.8 6.4E-08 2.2E-12 92.7 15.8 146 76-236 115-263 (405)
129 3sjn_A Mandelate racemase/muco 98.8 4.1E-08 1.4E-12 93.1 13.5 127 86-233 146-276 (374)
130 3sbf_A Mandelate racemase / mu 98.8 5.8E-08 2E-12 92.9 14.3 155 76-238 123-288 (401)
131 3i4k_A Muconate lactonizing en 98.8 2.2E-07 7.6E-12 88.3 18.2 139 77-238 139-281 (383)
132 4e5t_A Mandelate racemase / mu 98.8 8.2E-08 2.8E-12 91.9 15.1 138 85-234 150-291 (404)
133 4dwd_A Mandelate racemase/muco 98.8 2.7E-07 9.4E-12 87.9 18.6 141 76-234 126-273 (393)
134 3ro6_B Putative chloromuconate 98.8 5E-08 1.7E-12 91.9 13.1 135 77-235 131-269 (356)
135 3jva_A Dipeptide epimerase; en 98.8 1.3E-07 4.4E-12 89.0 15.8 136 79-238 132-270 (354)
136 2zad_A Muconate cycloisomerase 98.8 3E-07 1E-11 86.0 18.2 131 77-231 130-264 (345)
137 2y88_A Phosphoribosyl isomeras 98.8 8.1E-09 2.8E-13 91.8 7.0 84 158-244 32-115 (244)
138 2htm_A Thiazole biosynthesis p 98.8 4E-07 1.4E-11 80.9 17.6 197 2-237 10-212 (268)
139 3bjs_A Mandelate racemase/muco 98.8 7.3E-08 2.5E-12 93.0 14.0 124 85-232 183-311 (428)
140 3r4e_A Mandelate racemase/muco 98.8 4.7E-08 1.6E-12 94.0 12.5 152 77-236 134-305 (418)
141 1h5y_A HISF; histidine biosynt 98.8 7.6E-09 2.6E-13 91.9 6.5 86 157-244 33-118 (253)
142 2w6r_A Imidazole glycerol phos 98.7 1.7E-08 5.7E-13 91.0 8.1 86 157-244 30-118 (266)
143 1vzw_A Phosphoribosyl isomeras 98.7 9.6E-09 3.3E-13 91.5 6.3 84 158-244 33-116 (244)
144 4e4u_A Mandalate racemase/muco 98.7 1.7E-07 5.9E-12 89.9 15.0 138 85-234 143-284 (412)
145 1zfj_A Inosine monophosphate d 98.7 1.1E-07 3.9E-12 93.1 14.0 129 92-242 236-375 (491)
146 3ngj_A Deoxyribose-phosphate a 98.7 1.7E-07 5.9E-12 82.7 13.7 132 89-236 97-235 (239)
147 3qja_A IGPS, indole-3-glycerol 98.7 4E-07 1.4E-11 82.4 16.0 135 75-239 113-249 (272)
148 3r12_A Deoxyribose-phosphate a 98.7 2.8E-07 9.7E-12 82.2 14.6 134 89-237 113-252 (260)
149 2v82_A 2-dehydro-3-deoxy-6-pho 98.7 2.9E-07 9.8E-12 80.1 13.7 147 76-238 7-182 (212)
150 3oa3_A Aldolase; structural ge 98.7 4.4E-07 1.5E-11 82.1 15.2 133 89-237 128-270 (288)
151 2hxt_A L-fuconate dehydratase; 98.7 2.7E-07 9.2E-12 89.3 14.8 125 84-232 196-324 (441)
152 3tji_A Mandelate racemase/muco 98.7 1.6E-07 5.5E-12 90.4 13.1 154 77-238 145-309 (422)
153 3nav_A Tryptophan synthase alp 98.7 2.1E-07 7.3E-12 84.1 12.8 158 77-237 21-242 (271)
154 4gj1_A 1-(5-phosphoribosyl)-5- 98.7 2.6E-08 8.9E-13 88.9 6.7 86 157-244 31-116 (243)
155 3ndo_A Deoxyribose-phosphate a 98.7 3.4E-07 1.2E-11 80.6 13.6 133 89-237 82-226 (231)
156 3f4w_A Putative hexulose 6 pho 98.6 2.4E-07 8.3E-12 80.4 12.2 140 75-239 53-194 (211)
157 3cwo_X Beta/alpha-barrel prote 98.6 9.9E-08 3.4E-12 83.2 9.8 86 157-244 130-215 (237)
158 1viz_A PCRB protein homolog; s 98.6 1.8E-07 6.1E-12 83.0 11.3 55 188-244 167-223 (240)
159 3ddm_A Putative mandelate race 98.6 2.9E-07 9.8E-12 87.8 13.5 125 84-232 153-281 (392)
160 3q45_A Mandelate racemase/muco 98.6 5.5E-07 1.9E-11 85.1 14.9 134 77-234 131-267 (368)
161 3gd6_A Muconate cycloisomerase 98.6 6.7E-07 2.3E-11 85.2 15.4 138 77-240 129-276 (391)
162 2qr6_A IMP dehydrogenase/GMP r 98.6 2.5E-07 8.4E-12 88.2 12.1 102 127-235 140-242 (393)
163 2ekc_A AQ_1548, tryptophan syn 98.6 4.3E-07 1.5E-11 81.8 13.1 144 85-238 28-240 (262)
164 3my9_A Muconate cycloisomerase 98.6 1E-06 3.5E-11 83.5 16.3 135 77-234 137-274 (377)
165 1ujp_A Tryptophan synthase alp 98.6 5.5E-07 1.9E-11 81.5 13.5 150 78-238 18-235 (271)
166 1ub3_A Aldolase protein; schif 98.6 1E-06 3.4E-11 77.3 14.5 133 89-237 73-212 (220)
167 1yad_A Regulatory protein TENI 98.6 4E-07 1.4E-11 79.7 11.8 77 161-239 121-199 (221)
168 1sjd_A N-acylamino acid racema 98.6 6.1E-07 2.1E-11 84.7 13.9 128 77-231 131-262 (368)
169 3tsm_A IGPS, indole-3-glycerol 98.6 1.7E-06 5.7E-11 78.2 15.5 137 75-241 120-258 (272)
170 1me8_A Inosine-5'-monophosphat 98.6 7.1E-07 2.4E-11 87.8 14.1 102 129-238 268-387 (503)
171 3v3w_A Starvation sensing prot 98.6 9.9E-07 3.4E-11 84.9 14.9 150 77-237 140-312 (424)
172 1chr_A Chloromuconate cycloiso 98.6 1.1E-06 3.9E-11 82.9 15.0 135 77-234 133-271 (370)
173 3vcn_A Mannonate dehydratase; 98.5 8E-07 2.7E-11 85.6 13.7 150 77-237 141-313 (425)
174 3vk5_A MOEO5; TIM barrel, tran 98.5 2.7E-07 9.1E-12 83.0 9.6 78 160-244 189-270 (286)
175 2yw3_A 4-hydroxy-2-oxoglutarat 98.5 1.6E-07 5.4E-12 81.7 8.0 143 76-237 13-184 (207)
176 3i6e_A Muconate cycloisomerase 98.5 3.1E-06 1.1E-10 80.4 17.5 136 77-235 139-276 (385)
177 3ugv_A Enolase; enzyme functio 98.5 1.8E-06 6.1E-11 82.2 15.6 134 77-233 159-301 (390)
178 3tj4_A Mandelate racemase; eno 98.5 2E-06 6.7E-11 81.4 15.7 124 86-232 151-278 (372)
179 3toy_A Mandelate racemase/muco 98.5 3.2E-06 1.1E-10 80.2 17.0 133 77-232 158-294 (383)
180 3dg3_A Muconate cycloisomerase 98.5 2.5E-06 8.5E-11 80.5 15.9 132 77-232 130-266 (367)
181 3fv9_G Mandelate racemase/muco 98.5 3E-06 1E-10 80.5 16.5 139 75-235 134-276 (386)
182 3t6c_A RSPA, putative MAND fam 98.5 2E-06 6.7E-11 83.2 15.2 154 77-238 146-327 (440)
183 1w8s_A FBP aldolase, fructose- 98.5 5.3E-06 1.8E-10 74.7 16.6 121 96-240 101-239 (263)
184 3r0u_A Enzyme of enolase super 98.5 5.3E-06 1.8E-10 78.6 17.4 134 77-234 133-271 (379)
185 4af0_A Inosine-5'-monophosphat 98.5 3.8E-06 1.3E-10 81.8 16.2 132 84-237 277-418 (556)
186 1vc4_A Indole-3-glycerol phosp 98.5 1.6E-06 5.4E-11 77.8 12.4 135 75-241 106-245 (254)
187 3vzx_A Heptaprenylglyceryl pho 98.4 8.8E-07 3E-11 77.8 10.1 81 156-244 139-220 (228)
188 3tcs_A Racemase, putative; PSI 98.4 5.7E-06 1.9E-10 78.7 16.5 133 86-234 146-282 (388)
189 3go2_A Putative L-alanine-DL-g 98.4 4.7E-06 1.6E-10 79.8 16.0 138 85-232 142-292 (409)
190 1r0m_A N-acylamino acid racema 98.4 1.6E-06 5.5E-11 82.0 12.5 126 80-232 141-269 (375)
191 1tqj_A Ribulose-phosphate 3-ep 98.4 9.7E-07 3.3E-11 78.0 10.2 144 78-240 7-209 (230)
192 3mqt_A Mandelate racemase/muco 98.4 4E-06 1.4E-10 79.9 14.4 127 89-236 155-286 (394)
193 1rpx_A Protein (ribulose-phosp 98.4 2.2E-06 7.5E-11 75.4 11.7 144 78-240 13-215 (230)
194 2zc8_A N-acylamino acid racema 98.4 2.5E-06 8.7E-11 80.4 12.8 126 80-232 134-262 (369)
195 4e4f_A Mannonate dehydratase; 98.4 2.1E-06 7.2E-11 82.7 11.7 150 77-234 140-311 (426)
196 3mkc_A Racemase; metabolic pro 98.4 6.5E-06 2.2E-10 78.4 14.9 125 89-234 160-289 (394)
197 4e8g_A Enolase, mandelate race 98.3 7.4E-06 2.5E-10 78.0 14.7 132 77-234 155-290 (391)
198 1n7k_A Deoxyribose-phosphate a 98.3 7.8E-06 2.7E-10 72.1 13.7 130 89-237 90-228 (234)
199 3dgb_A Muconate cycloisomerase 98.3 9.3E-06 3.2E-10 77.0 15.3 136 77-235 139-278 (382)
200 3mwc_A Mandelate racemase/muco 98.3 5.5E-06 1.9E-10 79.1 13.6 134 77-237 151-290 (400)
201 3ajx_A 3-hexulose-6-phosphate 98.3 1.3E-05 4.4E-10 69.1 14.2 139 75-239 53-193 (207)
202 3fcp_A L-Ala-D/L-Glu epimerase 98.3 2.2E-05 7.5E-10 74.4 16.8 136 77-235 138-277 (381)
203 2fli_A Ribulose-phosphate 3-ep 98.3 4.1E-06 1.4E-10 72.9 10.8 142 78-239 6-205 (220)
204 1h1y_A D-ribulose-5-phosphate 98.3 4.5E-06 1.5E-10 73.5 11.0 140 76-240 65-209 (228)
205 1vcv_A Probable deoxyribose-ph 98.3 3.4E-05 1.2E-09 67.6 15.7 126 89-227 69-211 (226)
206 3p3b_A Mandelate racemase/muco 98.2 4.3E-06 1.5E-10 79.6 10.7 128 88-232 150-285 (392)
207 3ovp_A Ribulose-phosphate 3-ep 98.2 9.8E-06 3.3E-10 71.4 11.8 144 77-239 6-204 (228)
208 1xi3_A Thiamine phosphate pyro 98.2 2.2E-06 7.5E-11 74.3 7.4 75 163-239 121-197 (215)
209 2tps_A Protein (thiamin phosph 98.2 2.6E-06 9.1E-11 74.5 8.0 73 163-238 129-206 (227)
210 4hnl_A Mandelate racemase/muco 98.2 1.8E-05 6.3E-10 75.9 14.0 149 76-232 143-302 (421)
211 4a35_A Mitochondrial enolase s 98.2 3.5E-05 1.2E-09 74.4 15.9 127 84-234 199-331 (441)
212 2p10_A MLL9387 protein; putati 98.2 5.2E-06 1.8E-10 74.5 8.4 155 75-239 94-266 (286)
213 3ik4_A Mandelate racemase/muco 98.1 7.7E-05 2.6E-09 70.2 16.5 133 77-232 134-270 (365)
214 3o63_A Probable thiamine-phosp 98.1 4.2E-06 1.4E-10 74.5 7.3 76 161-239 146-226 (243)
215 1i4n_A Indole-3-glycerol phosp 98.1 3.3E-05 1.1E-09 68.8 13.0 136 75-241 101-239 (251)
216 2f6u_A GGGPS, (S)-3-O-geranylg 98.1 4E-06 1.4E-10 74.0 6.9 74 161-242 149-228 (234)
217 3tha_A Tryptophan synthase alp 98.1 5.7E-06 1.9E-10 73.8 7.9 153 77-237 15-232 (252)
218 3inp_A D-ribulose-phosphate 3- 98.1 1.6E-05 5.4E-10 70.8 10.7 144 77-239 29-230 (246)
219 2agk_A 1-(5-phosphoribosyl)-5- 98.1 1.9E-06 6.6E-11 77.5 4.7 78 157-244 38-120 (260)
220 3dip_A Enolase; structural gen 98.1 4E-05 1.4E-09 73.3 13.8 125 96-232 167-295 (410)
221 3ih1_A Methylisocitrate lyase; 98.1 4.6E-05 1.6E-09 69.7 13.0 204 7-236 30-247 (305)
222 3w01_A Heptaprenylglyceryl pho 98.0 2.1E-05 7.1E-10 69.2 9.5 69 169-245 158-227 (235)
223 3eoo_A Methylisocitrate lyase; 98.0 4.8E-05 1.7E-09 69.4 11.9 199 14-235 28-242 (298)
224 3glc_A Aldolase LSRF; TIM barr 98.0 0.00012 4.1E-09 66.7 14.6 95 132-239 161-264 (295)
225 2hjp_A Phosphonopyruvate hydro 98.0 0.00025 8.7E-09 64.4 16.6 201 13-236 20-239 (290)
226 1p1x_A Deoxyribose-phosphate a 98.0 4.7E-05 1.6E-09 68.1 11.3 123 89-226 87-221 (260)
227 2a4a_A Deoxyribose-phosphate a 98.0 6.5E-05 2.2E-09 67.8 12.2 123 89-227 108-249 (281)
228 4dxk_A Mandelate racemase / mu 98.0 6.8E-05 2.3E-09 71.5 13.1 128 95-232 162-291 (400)
229 1jvn_A Glutamine, bifunctional 98.0 1.2E-05 4.2E-10 79.9 7.6 82 157-239 280-374 (555)
230 3ctl_A D-allulose-6-phosphate 98.0 2.2E-05 7.4E-10 69.3 8.4 143 78-239 3-203 (231)
231 2ze3_A DFA0005; organic waste 97.9 0.00015 5.2E-09 65.4 13.3 196 12-236 20-236 (275)
232 1pii_A N-(5'phosphoribosyl)ant 97.9 0.00025 8.7E-09 68.3 15.3 136 75-241 108-245 (452)
233 2cu0_A Inosine-5'-monophosphat 97.9 2.4E-05 8.3E-10 76.5 8.0 96 133-238 258-363 (486)
234 4eiv_A Deoxyribose-phosphate a 97.9 0.00013 4.4E-09 65.8 11.8 119 89-222 102-252 (297)
235 3b8i_A PA4872 oxaloacetate dec 97.8 0.00027 9.4E-09 64.1 13.8 201 12-236 25-238 (287)
236 1zlp_A PSR132, petal death pro 97.8 0.00022 7.6E-09 65.5 13.1 200 13-236 44-261 (318)
237 4dye_A Isomerase; enolase fami 97.8 0.00031 1.1E-08 66.9 14.3 125 87-237 169-296 (398)
238 3ceu_A Thiamine phosphate pyro 97.8 5.1E-05 1.7E-09 65.8 7.8 74 163-239 101-179 (210)
239 1o66_A 3-methyl-2-oxobutanoate 97.8 0.00065 2.2E-08 61.0 15.0 157 12-209 21-203 (275)
240 3jr2_A Hexulose-6-phosphate sy 97.8 4.1E-05 1.4E-09 66.8 6.9 134 77-237 61-199 (218)
241 1s2w_A Phosphoenolpyruvate pho 97.8 0.00046 1.6E-08 62.9 14.0 203 13-236 24-242 (295)
242 3kts_A Glycerol uptake operon 97.7 0.00018 6.2E-09 61.3 10.2 75 155-239 112-186 (192)
243 4e38_A Keto-hydroxyglutarate-a 97.7 9.9E-05 3.4E-09 64.9 8.7 148 77-243 35-212 (232)
244 4a29_A Engineered retro-aldol 97.7 0.00031 1.1E-08 62.3 11.7 102 127-240 138-241 (258)
245 1tqx_A D-ribulose-5-phosphate 97.7 5.6E-05 1.9E-09 66.4 6.5 137 75-239 64-208 (227)
246 4avf_A Inosine-5'-monophosphat 97.7 7E-05 2.4E-09 73.3 7.7 70 157-232 228-298 (490)
247 1vhc_A Putative KHG/KDPG aldol 97.7 9.6E-05 3.3E-09 64.8 7.8 146 77-241 18-194 (224)
248 2pge_A MENC; OSBS, NYSGXRC, PS 97.7 0.00044 1.5E-08 65.2 12.7 133 77-232 153-291 (377)
249 1oy0_A Ketopantoate hydroxymet 97.6 0.00059 2E-08 61.4 12.7 157 12-209 38-221 (281)
250 1wuf_A Hypothetical protein LI 97.6 0.00064 2.2E-08 64.5 13.2 126 80-232 154-282 (393)
251 2chr_A Chloromuconate cycloiso 97.6 0.0016 5.4E-08 61.2 15.6 129 80-231 136-268 (370)
252 1wbh_A KHG/KDPG aldolase; lyas 97.6 0.00018 6.1E-09 62.6 8.2 148 76-241 16-193 (214)
253 1to3_A Putative aldolase YIHT; 97.6 0.00046 1.6E-08 63.3 11.3 100 131-238 144-260 (304)
254 4hpn_A Putative uncharacterize 97.6 0.0012 4.2E-08 62.1 14.6 116 92-231 151-268 (378)
255 3u9i_A Mandelate racemase/muco 97.5 0.001 3.4E-08 63.2 13.5 138 80-232 159-300 (393)
256 3s5s_A Mandelate racemase/muco 97.5 0.00083 2.9E-08 63.7 12.9 131 79-232 137-271 (389)
257 2h6r_A Triosephosphate isomera 97.5 0.00068 2.3E-08 59.1 10.9 102 130-240 99-207 (219)
258 4h1z_A Enolase Q92ZS5; dehydra 97.5 0.0015 5.1E-08 62.4 13.7 123 85-231 187-312 (412)
259 3khj_A Inosine-5-monophosphate 97.5 0.00065 2.2E-08 63.8 10.8 95 127-232 79-173 (361)
260 3lab_A Putative KDPG (2-keto-3 97.5 0.00028 9.4E-09 61.3 7.5 151 76-243 13-197 (217)
261 1qap_A Quinolinic acid phospho 97.4 0.00083 2.8E-08 61.2 10.7 91 131-240 195-288 (296)
262 3cu2_A Ribulose-5-phosphate 3- 97.4 0.00096 3.3E-08 58.9 10.7 132 79-237 73-222 (237)
263 1vc4_A Indole-3-glycerol phosp 97.4 0.0017 5.9E-08 57.9 12.2 96 135-237 38-140 (254)
264 1m3u_A 3-methyl-2-oxobutanoate 97.4 0.0018 6.3E-08 57.7 12.2 157 12-209 21-203 (264)
265 1ypf_A GMP reductase; GUAC, pu 97.4 0.00097 3.3E-08 61.9 10.9 97 127-232 79-177 (336)
266 2b7n_A Probable nicotinate-nuc 97.4 0.00057 1.9E-08 61.7 8.8 91 132-241 169-266 (273)
267 2ozt_A TLR1174 protein; struct 97.4 0.0048 1.6E-07 57.1 15.2 125 85-232 115-245 (332)
268 1mxs_A KDPG aldolase; 2-keto-3 97.3 0.00016 5.5E-09 63.4 4.6 147 77-241 27-203 (225)
269 3lye_A Oxaloacetate acetyl hyd 97.3 0.0032 1.1E-07 57.5 13.2 204 6-234 25-249 (307)
270 4h83_A Mandelate racemase/muco 97.3 0.0017 5.7E-08 61.6 11.7 125 85-231 163-290 (388)
271 3e96_A Dihydrodipicolinate syn 97.3 0.0023 8E-08 58.8 12.2 121 85-221 30-158 (316)
272 2qiw_A PEP phosphonomutase; st 97.3 0.0015 5E-08 58.3 10.2 194 12-234 24-238 (255)
273 1q6o_A Humps, 3-keto-L-gulonat 97.2 0.0073 2.5E-07 52.2 14.2 136 77-239 58-198 (216)
274 3qld_A Mandelate racemase/muco 97.2 0.0055 1.9E-07 58.0 14.1 129 77-232 139-270 (388)
275 3fa4_A 2,3-dimethylmalate lyas 97.2 0.0059 2E-07 55.6 13.5 204 7-235 19-242 (302)
276 3tsm_A IGPS, indole-3-glycerol 97.2 0.0012 3.9E-08 59.5 8.5 77 157-238 79-155 (272)
277 1wue_A Mandelate racemase/muco 97.2 0.0029 1E-07 59.8 11.7 121 85-232 160-282 (386)
278 1vkf_A Glycerol uptake operon 97.1 0.0008 2.7E-08 56.9 6.7 100 131-239 45-184 (188)
279 3l21_A DHDPS, dihydrodipicolin 97.1 0.009 3.1E-07 54.6 14.4 123 85-222 33-167 (304)
280 3vav_A 3-methyl-2-oxobutanoate 97.1 0.016 5.3E-07 52.0 15.5 156 13-209 34-215 (275)
281 1xky_A Dihydrodipicolinate syn 97.1 0.012 4.1E-07 53.7 15.1 123 85-222 30-164 (301)
282 2jbm_A Nicotinate-nucleotide p 97.1 0.00096 3.3E-08 61.0 7.6 91 132-241 184-281 (299)
283 2vc6_A MOSA, dihydrodipicolina 97.1 0.0096 3.3E-07 54.0 14.3 123 85-222 18-152 (292)
284 2yxg_A DHDPS, dihydrodipicolin 97.1 0.013 4.5E-07 53.1 15.1 122 85-221 18-151 (289)
285 3exr_A RMPD (hexulose-6-phosph 97.1 0.0037 1.3E-07 54.5 11.0 139 76-238 59-202 (221)
286 3vdg_A Probable glucarate dehy 97.1 0.0069 2.3E-07 58.4 13.9 122 85-232 192-316 (445)
287 2ehh_A DHDPS, dihydrodipicolin 97.1 0.016 5.6E-07 52.5 15.6 122 85-221 18-151 (294)
288 3qze_A DHDPS, dihydrodipicolin 97.1 0.015 5E-07 53.4 15.2 123 85-222 41-175 (314)
289 3igs_A N-acetylmannosamine-6-p 97.1 0.0034 1.2E-07 55.1 10.4 99 130-243 6-119 (232)
290 2rfg_A Dihydrodipicolinate syn 97.1 0.012 3.9E-07 53.7 14.2 123 85-222 18-152 (297)
291 1o4u_A Type II quinolic acid p 97.1 0.0011 3.7E-08 60.1 7.2 91 132-241 180-277 (285)
292 3va8_A Probable dehydratase; e 97.0 0.0071 2.4E-07 58.2 13.3 122 85-232 190-314 (445)
293 2r8w_A AGR_C_1641P; APC7498, d 97.0 0.014 4.7E-07 54.0 14.7 123 85-222 52-186 (332)
294 3cyj_A Mandelate racemase/muco 97.0 0.017 5.7E-07 54.2 15.6 121 86-232 144-270 (372)
295 2czd_A Orotidine 5'-phosphate 97.0 0.014 4.6E-07 50.2 13.7 127 77-239 53-192 (208)
296 1x1o_A Nicotinate-nucleotide p 97.0 0.0043 1.5E-07 56.2 10.7 89 133-240 184-276 (286)
297 3flu_A DHDPS, dihydrodipicolin 97.0 0.016 5.6E-07 52.6 14.7 122 85-221 25-158 (297)
298 4h2h_A Mandelate racemase/muco 97.0 0.013 4.5E-07 55.0 14.4 129 77-231 141-273 (376)
299 2v9d_A YAGE; dihydrodipicolini 97.0 0.015 5.2E-07 54.0 14.5 122 85-221 49-182 (343)
300 3d0c_A Dihydrodipicolinate syn 97.0 0.0076 2.6E-07 55.3 12.4 120 85-221 30-158 (314)
301 3vc5_A Mandelate racemase/muco 97.0 0.0097 3.3E-07 57.2 13.5 122 85-232 187-311 (441)
302 3b4u_A Dihydrodipicolinate syn 97.0 0.026 8.9E-07 51.2 15.7 122 85-221 21-158 (294)
303 3si9_A DHDPS, dihydrodipicolin 97.0 0.02 6.9E-07 52.5 14.9 123 85-222 40-174 (315)
304 3na8_A Putative dihydrodipicol 96.9 0.02 6.7E-07 52.6 14.8 121 85-220 42-174 (315)
305 3m5v_A DHDPS, dihydrodipicolin 96.9 0.024 8.2E-07 51.6 15.2 124 85-223 25-161 (301)
306 3daq_A DHDPS, dihydrodipicolin 96.9 0.022 7.5E-07 51.6 14.8 123 85-222 20-154 (292)
307 3tak_A DHDPS, dihydrodipicolin 96.9 0.02 6.7E-07 51.9 14.5 122 85-221 19-152 (291)
308 1nsj_A PRAI, phosphoribosyl an 96.9 0.012 4.2E-07 50.6 12.3 180 13-240 7-188 (205)
309 3fkr_A L-2-keto-3-deoxyarabona 96.9 0.021 7.1E-07 52.3 14.6 127 85-222 26-162 (309)
310 1o5k_A DHDPS, dihydrodipicolin 96.9 0.021 7.3E-07 52.1 14.6 122 85-221 30-163 (306)
311 2opj_A O-succinylbenzoate-COA 96.9 0.0045 1.5E-07 57.2 10.2 131 77-232 71-203 (327)
312 3nl6_A Thiamine biosynthetic b 96.9 0.0012 4E-08 65.2 6.5 79 160-239 118-216 (540)
313 3s5o_A 4-hydroxy-2-oxoglutarat 96.9 0.028 9.4E-07 51.4 15.1 127 85-222 32-168 (307)
314 3ijl_A Muconate cycloisomerase 96.9 0.0087 3E-07 55.5 11.8 123 81-231 129-252 (338)
315 1v5x_A PRA isomerase, phosphor 96.9 0.014 4.9E-07 50.0 12.3 193 12-263 5-198 (203)
316 1gox_A (S)-2-hydroxy-acid oxid 96.9 0.014 4.8E-07 54.8 13.3 96 136-233 115-254 (370)
317 1gvf_A Tagatose-bisphosphate a 96.9 0.023 7.9E-07 51.3 14.1 110 124-235 110-235 (286)
318 3lab_A Putative KDPG (2-keto-3 96.8 0.0074 2.5E-07 52.3 10.4 79 144-231 13-91 (217)
319 3c2e_A Nicotinate-nucleotide p 96.8 0.00093 3.2E-08 60.9 4.9 91 132-241 186-286 (294)
320 3cpr_A Dihydrodipicolinate syn 96.8 0.025 8.5E-07 51.6 14.4 122 85-221 34-167 (304)
321 2wkj_A N-acetylneuraminate lya 96.8 0.025 8.5E-07 51.6 14.3 123 85-222 29-164 (303)
322 1f6k_A N-acetylneuraminate lya 96.8 0.047 1.6E-06 49.5 16.0 123 85-222 21-156 (293)
323 3q58_A N-acetylmannosamine-6-p 96.8 0.055 1.9E-06 47.2 15.9 115 86-231 34-155 (229)
324 3a5f_A Dihydrodipicolinate syn 96.8 0.012 4.1E-07 53.4 12.0 122 85-221 19-152 (291)
325 3r2g_A Inosine 5'-monophosphat 96.8 0.0024 8.2E-08 59.7 7.3 70 157-232 99-169 (361)
326 3mzn_A Glucarate dehydratase; 96.8 0.022 7.4E-07 54.9 14.2 123 85-231 181-310 (450)
327 3qja_A IGPS, indole-3-glycerol 96.8 0.0035 1.2E-07 56.5 8.0 79 157-240 72-150 (272)
328 3n9r_A Fructose-bisphosphate a 96.7 0.043 1.5E-06 49.9 14.9 102 125-227 111-229 (307)
329 3p0w_A Mandelate racemase/muco 96.7 0.017 5.9E-07 56.0 13.1 124 84-231 198-328 (470)
330 4adt_A Pyridoxine biosynthetic 96.7 0.0064 2.2E-07 55.4 9.1 84 159-244 30-118 (297)
331 4fo4_A Inosine 5'-monophosphat 96.7 0.006 2.1E-07 57.2 9.1 97 127-232 80-177 (366)
332 2isw_A Putative fructose-1,6-b 96.6 0.028 9.7E-07 51.5 13.2 101 125-226 112-228 (323)
333 3q94_A Fructose-bisphosphate a 96.6 0.051 1.7E-06 49.1 14.7 109 125-235 117-239 (288)
334 2ojp_A DHDPS, dihydrodipicolin 96.6 0.022 7.7E-07 51.6 12.5 123 85-222 19-153 (292)
335 1vs1_A 3-deoxy-7-phosphoheptul 96.6 0.029 1E-06 50.4 13.0 116 120-241 127-251 (276)
336 2v82_A 2-dehydro-3-deoxy-6-pho 96.6 0.014 4.8E-07 50.0 10.5 82 143-233 6-88 (212)
337 1hg3_A Triosephosphate isomera 96.6 0.045 1.5E-06 47.7 13.6 119 100-240 88-213 (225)
338 4e38_A Keto-hydroxyglutarate-a 96.6 0.022 7.5E-07 49.9 11.6 96 133-243 26-121 (232)
339 3fok_A Uncharacterized protein 96.6 0.021 7.3E-07 51.7 11.7 114 100-237 141-278 (307)
340 3eb2_A Putative dihydrodipicol 96.6 0.025 8.6E-07 51.5 12.4 125 85-221 22-155 (300)
341 3o1n_A 3-dehydroquinate dehydr 96.6 0.17 5.7E-06 45.4 17.5 139 75-233 39-197 (276)
342 1zco_A 2-dehydro-3-deoxyphosph 96.5 0.018 6.3E-07 51.4 11.1 115 121-241 113-236 (262)
343 3dz1_A Dihydrodipicolinate syn 96.5 0.055 1.9E-06 49.5 14.6 125 85-222 26-160 (313)
344 3qfe_A Putative dihydrodipicol 96.5 0.029 9.8E-07 51.5 12.5 124 85-222 29-166 (318)
345 3h5d_A DHDPS, dihydrodipicolin 96.5 0.043 1.5E-06 50.2 13.6 123 85-222 25-160 (311)
346 1rvg_A Fructose-1,6-bisphospha 96.5 0.073 2.5E-06 48.4 14.8 103 124-227 108-227 (305)
347 3vkj_A Isopentenyl-diphosphate 96.5 0.0047 1.6E-07 58.0 7.1 103 124-231 100-217 (368)
348 1w0m_A TIM, triosephosphate is 96.5 0.046 1.6E-06 47.6 13.0 119 100-240 85-210 (226)
349 1p0k_A Isopentenyl-diphosphate 96.5 0.022 7.6E-07 52.9 11.7 88 141-232 114-209 (349)
350 1o60_A 2-dehydro-3-deoxyphosph 96.5 0.02 6.9E-07 51.9 11.1 116 120-241 114-248 (292)
351 4dbe_A Orotidine 5'-phosphate 96.5 0.071 2.4E-06 46.3 14.1 134 77-238 55-193 (222)
352 1qpo_A Quinolinate acid phosph 96.4 0.012 4.2E-07 53.1 9.4 93 132-240 182-277 (284)
353 1vr6_A Phospho-2-dehydro-3-deo 96.4 0.027 9.1E-07 52.4 11.8 116 120-241 195-319 (350)
354 3sr7_A Isopentenyl-diphosphate 96.4 0.01 3.5E-07 55.6 9.1 86 142-232 143-237 (365)
355 3jr2_A Hexulose-6-phosphate sy 96.4 0.062 2.1E-06 46.3 13.5 129 77-234 8-141 (218)
356 3f4w_A Putative hexulose 6 pho 96.4 0.064 2.2E-06 45.7 13.5 130 78-234 3-136 (211)
357 1zfj_A Inosine monophosphate d 96.4 0.0053 1.8E-07 59.8 7.2 70 158-233 233-303 (491)
358 4aaj_A N-(5'-phosphoribosyl)an 96.4 0.052 1.8E-06 47.4 12.8 130 77-236 72-206 (228)
359 3ajx_A 3-hexulose-6-phosphate 96.4 0.058 2E-06 45.8 12.8 132 78-235 3-137 (207)
360 3pfr_A Mandelate racemase/muco 96.3 0.04 1.4E-06 53.1 12.9 123 85-231 184-313 (455)
361 3tqv_A Nicotinate-nucleotide p 96.3 0.016 5.6E-07 52.2 9.4 90 132-240 186-278 (287)
362 1vqt_A Orotidine 5'-phosphate 96.3 0.038 1.3E-06 47.7 11.5 128 75-239 58-199 (213)
363 2gjl_A Hypothetical protein PA 96.3 0.029 1E-06 51.5 11.4 95 126-233 50-147 (328)
364 3ve9_A Orotidine-5'-phosphate 96.3 0.06 2E-06 46.6 12.5 133 75-239 50-187 (215)
365 2yci_X 5-methyltetrahydrofolat 96.3 0.032 1.1E-06 50.1 11.0 94 87-207 33-130 (271)
366 3sgz_A Hydroxyacid oxidase 2; 96.3 0.048 1.7E-06 50.7 12.4 44 187-232 202-245 (352)
367 3paj_A Nicotinate-nucleotide p 96.2 0.031 1.1E-06 51.1 10.9 89 132-239 219-310 (320)
368 4h3d_A 3-dehydroquinate dehydr 96.2 0.4 1.4E-05 42.5 18.0 93 75-178 19-121 (258)
369 3iv3_A Tagatose 1,6-diphosphat 96.2 0.11 3.6E-06 47.9 14.5 79 159-238 190-286 (332)
370 3ffs_A Inosine-5-monophosphate 96.2 0.014 4.9E-07 55.2 8.8 67 160-232 146-212 (400)
371 2qkf_A 3-deoxy-D-manno-octulos 96.2 0.033 1.1E-06 50.2 10.6 116 120-241 111-245 (280)
372 2hmc_A AGR_L_411P, dihydrodipi 96.2 0.098 3.4E-06 48.5 14.1 122 85-222 44-177 (344)
373 3sz8_A 2-dehydro-3-deoxyphosph 96.2 0.048 1.6E-06 49.1 11.5 110 120-235 116-244 (285)
374 2wqp_A Polysialic acid capsule 96.2 0.1 3.5E-06 48.4 14.1 207 6-241 20-243 (349)
375 3v5c_A Mandelate racemase/muco 96.2 0.032 1.1E-06 52.7 10.9 128 87-231 149-284 (392)
376 4g8t_A Glucarate dehydratase; 96.1 0.077 2.6E-06 51.2 13.8 121 86-230 202-329 (464)
377 3ekg_A Mandelate racemase/muco 96.1 0.037 1.3E-06 52.5 11.3 97 128-232 193-293 (404)
378 1jub_A Dihydroorotate dehydrog 96.1 0.074 2.5E-06 48.3 13.0 102 129-232 77-192 (311)
379 3gnn_A Nicotinate-nucleotide p 96.1 0.02 6.8E-07 52.0 8.8 90 132-240 197-289 (298)
380 3m47_A Orotidine 5'-phosphate 96.1 0.21 7.3E-06 43.4 15.0 134 76-238 65-208 (228)
381 2nuw_A 2-keto-3-deoxygluconate 96.0 0.085 2.9E-06 47.6 12.8 119 85-219 17-146 (288)
382 2r91_A 2-keto-3-deoxy-(6-phosp 96.0 0.092 3.2E-06 47.3 13.0 119 85-219 16-145 (286)
383 1y0e_A Putative N-acetylmannos 96.0 0.033 1.1E-06 48.0 9.6 82 145-239 8-102 (223)
384 2nli_A Lactate oxidase; flavoe 96.0 0.053 1.8E-06 50.8 11.7 88 143-232 132-257 (368)
385 1p4c_A L(+)-mandelate dehydrog 96.0 0.16 5.6E-06 47.6 15.1 45 186-232 209-253 (380)
386 3ru6_A Orotidine 5'-phosphate 96.0 0.32 1.1E-05 44.2 16.1 135 75-239 76-237 (303)
387 3nvt_A 3-deoxy-D-arabino-heptu 95.9 0.065 2.2E-06 50.5 11.7 109 121-235 232-349 (385)
388 3vav_A 3-methyl-2-oxobutanoate 95.9 0.28 9.5E-06 43.9 15.2 119 73-208 26-148 (275)
389 1kbi_A Cytochrome B2, L-LCR; f 95.9 0.077 2.6E-06 51.9 12.6 88 143-232 246-371 (511)
390 1ep3_A Dihydroorotate dehydrog 95.9 0.045 1.5E-06 49.6 10.2 99 132-231 86-195 (311)
391 2okt_A OSB synthetase, O-succi 95.9 0.053 1.8E-06 50.1 10.8 123 77-232 121-244 (342)
392 3fs2_A 2-dehydro-3-deoxyphosph 95.9 0.055 1.9E-06 49.0 10.5 109 120-235 137-263 (298)
393 3l0g_A Nicotinate-nucleotide p 95.8 0.044 1.5E-06 49.6 9.8 89 132-239 195-286 (300)
394 1w3i_A EDA, 2-keto-3-deoxy glu 95.8 0.1 3.5E-06 47.2 12.3 119 85-219 17-146 (293)
395 1yxy_A Putative N-acetylmannos 95.8 0.048 1.6E-06 47.4 9.6 93 132-239 8-115 (234)
396 1jcn_A Inosine monophosphate d 95.7 0.014 4.8E-07 57.2 6.7 70 158-233 255-325 (514)
397 1vli_A Spore coat polysacchari 95.7 0.17 5.8E-06 47.5 13.7 112 121-241 141-255 (385)
398 4fxs_A Inosine-5'-monophosphat 95.7 0.012 4E-07 57.5 6.0 69 158-232 231-300 (496)
399 3ih1_A Methylisocitrate lyase; 95.7 0.29 9.9E-06 44.5 14.7 149 73-231 26-194 (305)
400 1qop_A Tryptophan synthase alp 95.7 0.056 1.9E-06 48.3 9.8 105 131-236 4-133 (268)
401 2p3z_A L-rhamnonate dehydratas 95.7 0.071 2.4E-06 50.7 11.1 95 128-231 205-303 (415)
402 2ekc_A AQ_1548, tryptophan syn 95.7 0.11 3.9E-06 46.1 11.8 102 131-233 4-130 (262)
403 1wa3_A 2-keto-3-deoxy-6-phosph 95.6 0.05 1.7E-06 46.2 8.8 81 144-234 10-91 (205)
404 3vnd_A TSA, tryptophan synthas 95.6 0.09 3.1E-06 47.0 10.7 108 130-237 4-135 (267)
405 1gte_A Dihydropyrimidine dehyd 95.5 0.15 5.1E-06 54.1 13.8 97 135-231 625-734 (1025)
406 3iwp_A Copper homeostasis prot 95.4 0.18 6.1E-06 45.3 12.1 124 89-232 112-238 (287)
407 1vrd_A Inosine-5'-monophosphat 95.4 0.034 1.2E-06 54.1 8.0 71 157-233 236-307 (494)
408 3bw2_A 2-nitropropane dioxygen 95.4 0.16 5.5E-06 47.3 12.3 96 126-233 45-174 (369)
409 3bo9_A Putative nitroalkan dio 95.4 0.12 4E-06 47.5 11.2 90 127-231 61-150 (326)
410 3tqp_A Enolase; energy metabol 95.4 0.12 4.1E-06 49.3 11.5 98 127-232 217-337 (428)
411 2zbt_A Pyridoxal biosynthesis 95.4 0.044 1.5E-06 49.6 8.1 83 142-233 20-107 (297)
412 3fxg_A Rhamnonate dehydratase; 95.4 0.055 1.9E-06 52.1 9.0 97 128-232 199-298 (455)
413 3tml_A 2-dehydro-3-deoxyphosph 95.3 0.091 3.1E-06 47.4 9.7 109 120-235 113-245 (288)
414 2nv1_A Pyridoxal biosynthesis 95.3 0.071 2.4E-06 48.5 9.2 77 158-236 29-110 (305)
415 2ze3_A DFA0005; organic waste 95.3 0.22 7.4E-06 44.7 12.1 134 94-232 29-188 (275)
416 4af0_A Inosine-5'-monophosphat 95.2 0.033 1.1E-06 54.3 7.0 72 157-234 280-352 (556)
417 3nav_A Tryptophan synthase alp 95.2 0.12 4E-06 46.4 10.1 107 130-236 6-136 (271)
418 2fym_A Enolase; RNA degradosom 95.2 0.088 3E-06 50.3 10.0 72 152-231 265-340 (431)
419 2nzl_A Hydroxyacid oxidase 1; 95.2 0.14 4.8E-06 48.3 11.3 88 143-232 146-280 (392)
420 1eep_A Inosine 5'-monophosphat 95.2 0.033 1.1E-06 52.8 6.9 69 158-232 153-222 (404)
421 4ef8_A Dihydroorotate dehydrog 95.2 0.26 8.9E-06 45.8 12.8 128 100-231 71-227 (354)
422 1eix_A Orotidine 5'-monophosph 95.2 0.25 8.4E-06 43.4 12.1 133 76-239 66-228 (245)
423 1h1y_A D-ribulose-5-phosphate 95.1 0.095 3.2E-06 45.4 9.3 133 77-234 8-147 (228)
424 3iwp_A Copper homeostasis prot 95.1 0.68 2.3E-05 41.6 14.8 135 78-232 40-186 (287)
425 1f6y_A 5-methyltetrahydrofolat 95.1 0.22 7.4E-06 44.4 11.6 96 85-207 22-121 (262)
426 3tfx_A Orotidine 5'-phosphate 95.1 1.7 5.6E-05 38.5 18.3 135 75-239 56-223 (259)
427 2z6i_A Trans-2-enoyl-ACP reduc 95.1 0.15 5.1E-06 46.9 11.0 92 127-233 47-139 (332)
428 1m3u_A 3-methyl-2-oxobutanoate 95.1 0.48 1.6E-05 42.1 13.6 139 76-231 17-180 (264)
429 2yyu_A Orotidine 5'-phosphate 95.1 0.6 2E-05 40.9 14.3 134 76-239 56-222 (246)
430 2h9a_B CO dehydrogenase/acetyl 95.0 0.29 1E-05 44.6 12.4 94 95-209 82-180 (310)
431 1kko_A 3-methylaspartate ammon 95.0 0.11 3.8E-06 49.3 10.0 97 131-232 218-331 (413)
432 1vhc_A Putative KHG/KDPG aldol 95.0 0.23 7.8E-06 43.1 11.2 80 145-233 18-97 (224)
433 1jpd_X L-Ala-D/L-Glu epimerase 95.0 0.061 2.1E-06 49.3 7.8 121 81-231 127-249 (324)
434 2yr1_A 3-dehydroquinate dehydr 94.9 1.8 6.3E-05 38.1 18.5 140 76-233 20-177 (257)
435 4dpp_A DHDPS 2, dihydrodipicol 94.9 0.36 1.2E-05 44.9 12.8 82 85-177 77-161 (360)
436 1twd_A Copper homeostasis prot 94.9 0.57 1.9E-05 41.3 13.3 116 99-231 20-147 (256)
437 3lg3_A Isocitrate lyase; conse 94.9 0.8 2.7E-05 43.4 15.2 151 76-237 153-357 (435)
438 2e6f_A Dihydroorotate dehydrog 94.8 0.18 6.3E-06 45.7 10.6 89 142-232 92-195 (314)
439 1w6t_A Enolase; bacterial infe 94.8 0.18 6.1E-06 48.4 10.9 71 154-232 279-353 (444)
440 3usb_A Inosine-5'-monophosphat 94.8 0.097 3.3E-06 51.2 9.2 70 158-233 256-326 (511)
441 1o66_A 3-methyl-2-oxobutanoate 94.7 0.56 1.9E-05 41.9 13.1 115 76-207 17-136 (275)
442 1dbt_A Orotidine 5'-phosphate 94.7 0.96 3.3E-05 39.3 14.7 135 76-240 55-222 (239)
443 1kcz_A Beta-methylaspartase; b 94.7 0.17 5.7E-06 48.1 10.4 95 131-232 218-331 (413)
444 2hjp_A Phosphonopyruvate hydro 94.7 0.3 1E-05 44.1 11.5 92 82-180 20-113 (290)
445 3eoo_A Methylisocitrate lyase; 94.7 0.39 1.3E-05 43.5 12.2 149 76-232 22-191 (298)
446 2fli_A Ribulose-phosphate 3-ep 94.6 0.088 3E-06 45.1 7.6 81 154-236 13-95 (220)
447 3cpr_A Dihydrodipicolinate syn 94.6 0.15 5.1E-06 46.4 9.4 86 154-239 34-125 (304)
448 2nwr_A 2-dehydro-3-deoxyphosph 94.6 0.18 6E-06 45.0 9.6 114 120-241 100-231 (267)
449 1wbh_A KHG/KDPG aldolase; lyas 94.6 0.25 8.5E-06 42.5 10.3 80 144-232 16-95 (214)
450 3g8r_A Probable spore coat pol 94.5 0.92 3.1E-05 42.0 14.6 132 67-227 83-220 (350)
451 3i4e_A Isocitrate lyase; struc 94.5 0.53 1.8E-05 44.7 13.1 151 76-237 153-357 (439)
452 1geq_A Tryptophan synthase alp 94.5 0.071 2.4E-06 46.6 6.9 85 154-240 16-123 (248)
453 2c6q_A GMP reductase 2; TIM ba 94.5 0.067 2.3E-06 49.8 6.9 68 160-233 120-190 (351)
454 1f8m_A Isocitrate lyase, ICL; 94.5 0.55 1.9E-05 44.6 13.2 151 76-237 149-353 (429)
455 3m47_A Orotidine 5'-phosphate 94.5 0.53 1.8E-05 40.8 12.4 86 76-179 13-100 (228)
456 3qze_A DHDPS, dihydrodipicolin 94.4 0.13 4.3E-06 47.1 8.4 86 154-239 41-132 (314)
457 1rd5_A Tryptophan synthase alp 94.3 0.17 6E-06 44.7 9.1 101 131-233 5-126 (262)
458 1xky_A Dihydrodipicolinate syn 94.3 0.14 4.8E-06 46.5 8.6 86 154-239 30-121 (301)
459 3daq_A DHDPS, dihydrodipicolin 94.3 0.13 4.5E-06 46.4 8.3 86 154-239 20-111 (292)
460 3flu_A DHDPS, dihydrodipicolin 94.3 0.14 4.9E-06 46.3 8.6 86 154-239 25-116 (297)
461 1mxs_A KDPG aldolase; 2-keto-3 94.3 0.36 1.2E-05 41.9 10.8 90 131-232 16-105 (225)
462 3a5f_A Dihydrodipicolinate syn 94.2 0.16 5.3E-06 45.9 8.6 86 154-239 19-110 (291)
463 1xg4_A Probable methylisocitra 94.2 0.7 2.4E-05 41.8 12.8 147 77-231 18-186 (295)
464 3o07_A Pyridoxine biosynthesis 94.2 0.15 5E-06 45.6 8.0 71 158-229 19-94 (291)
465 2bdq_A Copper homeostasis prot 94.2 0.99 3.4E-05 39.0 13.0 114 100-230 21-151 (224)
466 1sfl_A 3-dehydroquinate dehydr 94.1 2.2 7.6E-05 37.1 15.6 138 77-233 5-163 (238)
467 3eol_A Isocitrate lyase; seatt 94.1 0.53 1.8E-05 44.7 12.1 152 75-237 145-352 (433)
468 3tak_A DHDPS, dihydrodipicolin 94.0 0.15 5.1E-06 46.0 8.1 86 154-239 19-110 (291)
469 3b4u_A Dihydrodipicolinate syn 94.0 0.15 5.1E-06 46.2 8.0 85 154-238 21-111 (294)
470 1o5k_A DHDPS, dihydrodipicolin 94.0 0.16 5.6E-06 46.1 8.3 86 154-239 30-121 (306)
471 1f6k_A N-acetylneuraminate lya 94.0 0.16 5.5E-06 45.9 8.2 86 154-239 21-113 (293)
472 2wkj_A N-acetylneuraminate lya 94.0 0.15 5.2E-06 46.3 8.0 86 154-239 29-120 (303)
473 3tr9_A Dihydropteroate synthas 94.0 0.19 6.4E-06 45.9 8.6 84 85-175 46-130 (314)
474 3l21_A DHDPS, dihydrodipicolin 94.0 0.16 5.4E-06 46.2 8.1 85 154-239 33-124 (304)
475 2ehh_A DHDPS, dihydrodipicolin 93.9 0.16 5.6E-06 45.8 8.1 86 154-239 18-109 (294)
476 2ojp_A DHDPS, dihydrodipicolin 93.9 0.15 5.2E-06 46.0 7.9 86 154-239 19-110 (292)
477 2yxg_A DHDPS, dihydrodipicolin 93.9 0.17 5.8E-06 45.6 8.1 86 154-239 18-109 (289)
478 1ydn_A Hydroxymethylglutaryl-C 93.8 1.5 5.1E-05 39.3 14.4 165 81-254 76-254 (295)
479 2ftp_A Hydroxymethylglutaryl-C 93.8 1.5 5.1E-05 39.6 14.3 162 85-254 84-258 (302)
480 3k13_A 5-methyltetrahydrofolat 93.8 0.3 1E-05 44.3 9.5 97 86-207 35-138 (300)
481 2rfg_A Dihydrodipicolinate syn 93.7 0.15 5.1E-06 46.2 7.5 86 154-239 18-109 (297)
482 3si9_A DHDPS, dihydrodipicolin 93.7 0.15 5.2E-06 46.6 7.5 86 154-239 40-131 (315)
483 3m5v_A DHDPS, dihydrodipicolin 93.7 0.18 6.1E-06 45.8 7.9 86 154-239 25-117 (301)
484 3na8_A Putative dihydrodipicol 93.7 0.16 5.6E-06 46.4 7.7 86 154-239 42-133 (315)
485 2r8w_A AGR_C_1641P; APC7498, d 93.7 0.16 5.5E-06 46.8 7.6 86 154-239 52-143 (332)
486 2pcq_A Putative dihydrodipicol 93.6 0.46 1.6E-05 42.6 10.5 118 85-221 16-143 (283)
487 1r6w_A OSB synthase, O-succiny 93.6 0.07 2.4E-06 48.9 5.0 120 84-231 113-236 (322)
488 2v9d_A YAGE; dihydrodipicolini 93.5 0.18 6.1E-06 46.7 7.7 86 154-239 49-140 (343)
489 2bdq_A Copper homeostasis prot 93.5 1.3 4.3E-05 38.3 12.5 139 75-231 54-206 (224)
490 2pa6_A Enolase; glycolysis, ly 93.5 0.32 1.1E-05 46.3 9.6 71 154-232 267-339 (427)
491 3pm6_A Putative fructose-bisph 93.5 0.8 2.7E-05 41.5 11.6 67 168-235 182-254 (306)
492 3oix_A Putative dihydroorotate 93.4 0.73 2.5E-05 42.6 11.6 89 140-230 125-222 (345)
493 3fkr_A L-2-keto-3-deoxyarabona 93.4 0.24 8.2E-06 45.1 8.2 83 154-236 26-114 (309)
494 2vc6_A MOSA, dihydrodipicolina 93.3 0.16 5.6E-06 45.8 6.9 86 154-239 18-109 (292)
495 2fiq_A Putative tagatose 6-pho 93.2 0.61 2.1E-05 44.2 10.9 168 67-235 30-284 (420)
496 1zco_A 2-dehydro-3-deoxyphosph 93.2 2.1 7.1E-05 37.9 13.9 137 77-235 24-168 (262)
497 1s2w_A Phosphoenolpyruvate pho 93.2 1.1 3.9E-05 40.3 12.4 91 82-180 24-117 (295)
498 2vef_A Dihydropteroate synthas 93.2 0.33 1.1E-05 44.3 8.8 100 86-208 31-135 (314)
499 1oy0_A Ketopantoate hydroxymet 93.2 1.9 6.5E-05 38.5 13.6 115 75-206 33-153 (281)
500 2hmc_A AGR_L_411P, dihydrodipi 93.1 0.27 9.3E-06 45.5 8.2 85 154-238 44-131 (344)
No 1
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=100.00 E-value=4.8e-53 Score=395.50 Aligned_cols=285 Identities=24% Similarity=0.371 Sum_probs=236.8
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
|+++||+++|||+++|+.+||.+++++|+|+++|||++++.+....+.. + +. + .++.+.|+++
T Consensus 1 ~~l~nri~~APM~~~t~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~------~--------~~-l--~~~~~~~~~~ 63 (318)
T 1vhn_A 1 MSLEVKVGLAPMAGYTDSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKT------E--------EL-L--PQPHERNVAV 63 (318)
T ss_dssp ----CEEEECCCTTTCSHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHH------H--------HH-S--CCTTCTTEEE
T ss_pred CccCCCEEECCCCCCCcHHHHHHHHHHCcCEEEeCCEEEcccccCCHhH------H--------Hh-h--hCcCCCeEEE
Confidence 5789999999999999999999999999999999999988765432211 1 11 2 3556679999
Q ss_pred EECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHH
Q 020428 81 QMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~ 160 (326)
||+|++|+++.++|+++.+.+|+||||+|||.++++++++|++++++|+++.++++++++.+++||++|+|.|++..+..
T Consensus 64 QL~g~~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~~~~~ 143 (318)
T 1vhn_A 64 QIFGSEPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEKNEVE 143 (318)
T ss_dssp EEECSCHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSSCCHH
T ss_pred EeCCCCHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCChHHHH
Confidence 99999999999999999766999999999999999999999999999999999999999999999999999998877777
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
++++.++++|+|+|+||+|+..+.++++++|+.++++++ ++|||+||||+|++|+.++++.+|||+||+||+++.|||
T Consensus 144 ~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~--~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR~~l~~P~ 221 (318)
T 1vhn_A 144 EIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK--RIPTFVSGDIFTPEDAKRALEESGCDGLLVARGAIGRPW 221 (318)
T ss_dssp HHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC--SSCEEEESSCCSHHHHHHHHHHHCCSEEEESGGGTTCTT
T ss_pred HHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc--CCeEEEECCcCCHHHHHHHHHcCCCCEEEECHHHHhCcc
Confidence 999999999999999999999888888899999998888 999999999999999999997689999999999999999
Q ss_pred ccccc------CC---CCHH---HHHHHHHHHHHhhccCcchHHHHHHHHHHHhhc--CCCch----hHHHhccCCHHHH
Q 020428 241 IFSSQ------GK---LHWE---DVKREYVRKSIFWENNVKSTKHTLKEMIMHYSS--LELPE----GKAIIKSETLADI 302 (326)
Q Consensus 241 lf~~~------~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~ 302 (326)
+|.+. +. ..+. +++++|++...++.++ ...+..|++++.+ .++|+ ++++++++|.+++
T Consensus 222 l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 297 (318)
T 1vhn_A 222 IFKQIKDFLRSGKYSEPSREEILRTFERHLELLIKTKGE----RKAVVEMRKFLAGYTKDLKGARRFREKVMKIEEVQIL 297 (318)
T ss_dssp HHHHHHHHHHHSCCCCCCHHHHHHHHHHHHHHHHHHHCH----HHHHHHHHTTHHHHTTTCTTHHHHHHHHTTCCCHHHH
T ss_pred hHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHhcCc----hHHHHHHHHHHHHHHhcCCChHHHHHHHHcCCCHHHH
Confidence 99873 32 2233 3556677776665443 2233344333332 25676 3689999999999
Q ss_pred HHHHHh
Q 020428 303 AKLYEE 308 (326)
Q Consensus 303 ~~~~~~ 308 (326)
.+++++
T Consensus 298 ~~~~~~ 303 (318)
T 1vhn_A 298 KEMFYN 303 (318)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999874
No 2
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=100.00 E-value=1.8e-51 Score=389.20 Aligned_cols=280 Identities=21% Similarity=0.349 Sum_probs=230.8
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
.++||+++|||+|+||.+||.+++++|+ |+++|||++++.+.+..+ +.+.+ .+.++.|+++
T Consensus 1 ~l~nriv~APM~g~td~~~r~~~r~~Gg~gli~te~~~~~~~~~~~~-----------------~~~~~-~~~~~~p~~v 62 (350)
T 3b0p_A 1 MLDPRLSVAPMVDRTDRHFRFLVRQVSLGVRLYTEMTVDQAVLRGNR-----------------ERLLA-FRPEEHPIAL 62 (350)
T ss_dssp -CCCSEEECCCTTTSSHHHHHHHHHHCSSSBEECCCEEHHHHHHSCH-----------------HHHHC-CCGGGCSEEE
T ss_pred CCCCCEEECCCCCCCHHHHHHHHHHcCCCCEEEeCCEEechhhcCCH-----------------HHHhc-cCCCCCeEEE
Confidence 4799999999999999999999999986 999999999887654221 00122 2445569999
Q ss_pred EECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCCh---
Q 020428 81 QMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSS--- 156 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~--- 156 (326)
||+|++|+++.++|+++.+ |+|+||||+|||.+++++++||++++++++++.++++++++++++||++|+|+|++.
T Consensus 63 QL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~ 142 (350)
T 3b0p_A 63 QLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKET 142 (350)
T ss_dssp EEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCC
T ss_pred EeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCcccc
Confidence 9999999999999999987 899999999999999999999999999999999999999999999999999998653
Q ss_pred -HHHHHHHHHHHHcCCcEEEEeecccCCCCCC-------cCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCc
Q 020428 157 -QDTVELARRIEKTGVSALAVHGRKVADRPRD-------PAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 157 -~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~-------~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad 227 (326)
+++.++++.++++|+|+|+||+|+..+.+++ +.+|+.++++++.+ ++|||+||||+|++|+.++++ |||
T Consensus 143 ~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~--GaD 220 (350)
T 3b0p_A 143 YRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK--RVD 220 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT--TSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh--CCC
Confidence 4789999999999999999999987654443 46899999999998 999999999999999999994 899
Q ss_pred EEEeccchhcCccccccc-----C---CCCHHHHHH---HHHHHHHhhccCcchHHHHHHHHHHHhhcC--CCchh----
Q 020428 228 SVMAARGALWNASIFSSQ-----G---KLHWEDVKR---EYVRKSIFWENNVKSTKHTLKEMIMHYSSL--ELPEG---- 290 (326)
Q Consensus 228 ~VmiGr~~l~~P~lf~~~-----~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---- 290 (326)
+||+||+++.|||+|.+. + ..++.+.+. +|++.+.+++. .++.+++|+.+| ++|+.
T Consensus 221 ~V~iGRa~l~~P~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~-------~~~~~~kh~~~~~~g~~~~~~~r 293 (350)
T 3b0p_A 221 GVMLGRAVYEDPFVLEEADRRVFGLPRRPSRLEVARRMRAYLEEEVLKGT-------PPWAVLRHMLNLFRGRPKGRLWR 293 (350)
T ss_dssp EEEECHHHHHCGGGGTTHHHHTTCCSCCCCHHHHHHHHHHHHHHHHHHTC-------CHHHHHTTSTTTTTTSTTHHHHH
T ss_pred EEEECHHHHhCcHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCc-------cHHHHHHHHHHHHccCCCHHHHH
Confidence 999999999999999973 2 234555544 44444444322 244555555554 56763
Q ss_pred HHHhccCCHHHHHHHHHh
Q 020428 291 KAIIKSETLADIAKLYEE 308 (326)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~ 308 (326)
+.|++++|++++.+++++
T Consensus 294 ~~l~~~~~~~~~~~~l~~ 311 (350)
T 3b0p_A 294 RLLSEGRSLQALDRALRL 311 (350)
T ss_dssp HHHHHHCSHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHH
Confidence 578999999999999876
No 3
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=100.00 E-value=3.1e-37 Score=290.57 Aligned_cols=240 Identities=13% Similarity=0.127 Sum_probs=190.0
Q ss_pred CCCCCceEEccccCCCC---------HH---HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceee
Q 020428 1 MDYQNKLVLAPMVRVGT---------LP---FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVF 68 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~---------~~---fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (326)
++++||+++|||++++. .. |++.+ +.|+|+++||+++++......+ ...+.++-......+.+.
T Consensus 14 ~~l~NRiv~aPm~~~~~~~~~g~~~~~~~~~y~~rA-~gG~gliite~~~v~~~g~~~~---~~~~i~~d~~~~~~~~~~ 89 (338)
T 1z41_A 14 MTLKNRIVMSPMCMYSSHEKDGKLTPFHMAHYISRA-IGQVGLIIVEASAVNPQGRITD---QDLGIWSDEHIEGFAKLT 89 (338)
T ss_dssp EEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHH-HTTCSEEEEEEEESSGGGCSST---TSCBCSSTHHHHHHHHHH
T ss_pred EEEcCccEECCcCCCcCCCCCCCCCHHHHHHHHHHH-cCCCCEEEeCCeeccccccCCC---CCcccCCHHHHHHHHHHH
Confidence 46899999999998753 22 33333 2389999999998764322111 111211100000112234
Q ss_pred ecccCCCCcEEEEECCC-----------------------CH------------HHHHHHHHHhhc-CCCEEEEccCC--
Q 020428 69 RTCHQERNHVVFQMGTS-----------------------DA------------VRALTAAKMVCK-DVAAIDINMGC-- 110 (326)
Q Consensus 69 ~~~~~~~~p~~vQl~g~-----------------------~~------------~~~~~aa~~~~~-~~d~idlN~gc-- 110 (326)
+.+|+.+.++++||++. .| ++|+++|+++.+ |||+||||++|
T Consensus 90 ~~vh~~g~~i~~QL~h~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gy 169 (338)
T 1z41_A 90 EQVKEQGSKIGIQLAHAGRKAELEGDIFAPSAIAFDEQSATPVEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGY 169 (338)
T ss_dssp HHHHHTTCEEEEEEECCGGGCCCSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTS
T ss_pred HHHHhcCCEEEEEecCCCcccCCCCCCcCCCCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccch
Confidence 55677788999999853 22 689999999887 99999999997
Q ss_pred -------CccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC------CCChHHHHHHHHHHHHcCCcEEEEe
Q 020428 111 -------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL------LKSSQDTVELARRIEKTGVSALAVH 177 (326)
Q Consensus 111 -------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~------g~~~~~~~e~a~~l~~~G~d~i~vh 177 (326)
|..+.+.++||++++++++++.+++++++++++.||++|++. |++.+++.++++.++++|+|+|++|
T Consensus 170 Ll~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 170 LIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp HHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 999999999999999999999999999999999999999998 5778899999999999999999999
Q ss_pred ecccCCC--CCCc-CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 178 GRKVADR--PRDP-AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 178 ~r~~~~~--~~~~-~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
+++.... ..++ .+++.++++++.+++|||++|||+|+++++++++..+||+|++||+++.||+|+.+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~k 319 (338)
T 1z41_A 250 SGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIFIGRELLRDPFFART 319 (338)
T ss_dssp CCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHH
T ss_pred cCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHH
Confidence 9865321 2233 47899999999999999999999999999999964459999999999999999886
No 4
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=100.00 E-value=3e-37 Score=294.01 Aligned_cols=239 Identities=12% Similarity=0.102 Sum_probs=191.4
Q ss_pred CCCCCceEEccccCC-------CCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccC
Q 020428 1 MDYQNKLVLAPMVRV-------GTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQ 73 (326)
Q Consensus 1 l~l~~~iilAPM~g~-------t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (326)
++++||+++|||++. |+..++.+++++|+|+++||+++++......+ ...+.++-......+.+.+..|+
T Consensus 20 ~~l~NRiv~aPm~~~~a~~g~pt~~~~~~y~~rA~~GLiitE~~~v~~~g~~~~---~~~gi~~d~~i~~~k~l~~avh~ 96 (377)
T 2r14_A 20 LSLPNRVIMAPLTRSRTPDSVPGRLQQIYYGQRASAGLIISEATNISPTARGYV---YTPGIWTDAQEAGWKGVVEAVHA 96 (377)
T ss_dssp EEESCSEEECCCCCCCCTTSCCCHHHHHHHHHTTTSSCEEEEEEESSGGGCCBT---TCCBSSSHHHHHHHHHHHHHHHH
T ss_pred EEecCCeEECCCcCCcCCCCCCCHHHHHHHHHHhcCCEEEEcceeeccccccCC---CCcccCCHHHHHHHHHHHHHHhh
Confidence 468999999999987 88999999999999999999998864322111 11222110000011223455677
Q ss_pred CCCcEEEEECCC-------------------------------------------CH------------HHHHHHHHHhh
Q 020428 74 ERNHVVFQMGTS-------------------------------------------DA------------VRALTAAKMVC 98 (326)
Q Consensus 74 ~~~p~~vQl~g~-------------------------------------------~~------------~~~~~aa~~~~ 98 (326)
.+.++++||++. .| ++|+++|+++.
T Consensus 97 ~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~i~~~~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a~ 176 (377)
T 2r14_A 97 KGGRIALQLWHVGRVSHELVQPDGQQPVAPSALKAEGAECFVEFEDGTAGLHPTSTPRALETDEIPGIVEDYRQAAQRAK 176 (377)
T ss_dssp TTCCEEEEEECCTTSCCTTTSGGGCCCEESSSCCCTTCEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHHH
T ss_pred cCCeEEEEccCCccccccccccCCCcccCCCcccccccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 788999999751 23 78999999987
Q ss_pred c-CCCEEEEccCC---------CccccccccccccccCChHHHHHHHHHHhhcccC-cEEEEecCC---------CChHH
Q 020428 99 K-DVAAIDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV-PVTCKIRLL---------KSSQD 158 (326)
Q Consensus 99 ~-~~d~idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~-pv~vK~r~g---------~~~~~ 158 (326)
+ |||+||||++| |..|.+.++||++++++++++.+++++|+++++. ||++|++.. ++.++
T Consensus 177 ~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~~~~~~~~ 256 (377)
T 2r14_A 177 RAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLTDDEPEAM 256 (377)
T ss_dssp HHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCCCSCHHHH
T ss_pred HcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCCCCCHHH
Confidence 7 99999999997 9999999999999999999999999999999853 999999873 23567
Q ss_pred HHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 159 TVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+.++++.++++|+|+|++|+++..+.+.+ .+++.++++++.+++|||+|||| ++++++++++..+||+||+||+++.|
T Consensus 257 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~-~~~~~~~~ik~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~l~~ 334 (377)
T 2r14_A 257 AFYLAGELDRRGLAYLHFNEPDWIGGDIT-YPEGFREQMRQRFKGGLIYCGNY-DAGRAQARLDDNTADAVAFGRPFIAN 334 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC------C-CCTTHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCc-chHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHCCCceEEeecHHHHhC
Confidence 89999999999999999999865443322 26888999999999999999999 69999999976669999999999999
Q ss_pred cccccc
Q 020428 239 ASIFSS 244 (326)
Q Consensus 239 P~lf~~ 244 (326)
|+|+.+
T Consensus 335 P~l~~k 340 (377)
T 2r14_A 335 PDLPER 340 (377)
T ss_dssp TTHHHH
T ss_pred chHHHH
Confidence 999987
No 5
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=100.00 E-value=4e-36 Score=285.24 Aligned_cols=238 Identities=12% Similarity=0.131 Sum_probs=191.3
Q ss_pred CCCCCceEEccccCC---------CCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecc
Q 020428 1 MDYQNKLVLAPMVRV---------GTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTC 71 (326)
Q Consensus 1 l~l~~~iilAPM~g~---------t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (326)
++++||+++|||++. |+..++.+++++|+|+++||+++++......+ ...+.++-......+.+.+.+
T Consensus 14 ~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiite~~~v~~~g~~~~---~~~gi~~d~~i~~~~~l~~~v 90 (364)
T 1vyr_A 14 VTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIISEATQISAQAKGYA---GAPGLHSPEQIAAWKKITAGV 90 (364)
T ss_dssp EEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEEEEEESSSTTCCST---TCCBSSSHHHHHHHHHHHHHH
T ss_pred EEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEEccccccccccCCC---CCcccCCHHHHHHHHHHHHHH
Confidence 468999999999975 57789999999999999999998764322111 111211100000112234556
Q ss_pred cCCCCcEEEEECC------------------------------------------CCH------------HHHHHHHHHh
Q 020428 72 HQERNHVVFQMGT------------------------------------------SDA------------VRALTAAKMV 97 (326)
Q Consensus 72 ~~~~~p~~vQl~g------------------------------------------~~~------------~~~~~aa~~~ 97 (326)
|+.+.++++||++ ..| ++|+++|+++
T Consensus 91 h~~g~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~i~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a 170 (364)
T 1vyr_A 91 HAEDGRIAVQLWHTGRISHSSIQPGGQAPVSASALNANTRTSLRDENGNAIRVDTTTPRALELDEIPGIVNDFRQAVANA 170 (364)
T ss_dssp HHTTCCEEEEEECCTTSSCGGGSGGGCCCEESSSCCCCSEEEEECTTSCEEEEECCCCEECCGGGHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeccCCcccCcccccCCCccccCCCcccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 7778899999973 123 6899999998
Q ss_pred hc-CCCEEEEccCC---------CccccccccccccccCChHHHHHHHHHHhhccc-CcEEEEecCC--C--------Ch
Q 020428 98 CK-DVAAIDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLD-VPVTCKIRLL--K--------SS 156 (326)
Q Consensus 98 ~~-~~d~idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~g--~--------~~ 156 (326)
.+ |||+||||++| |..|.+.++||++++++++++.++++++|++++ .||++|++.+ + +.
T Consensus 171 ~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~ 250 (364)
T 1vyr_A 171 REAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEE 250 (364)
T ss_dssp HHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHH
T ss_pred HHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEccccccccccCCCCCH
Confidence 77 99999999997 888999999999999999999999999999983 3999999985 2 23
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
+++.++++.++++|+|+|++|+++..+.+ +..++.++++++.+++|||++||| |+++++++++..+||+||+||+++
T Consensus 251 ~~~~~~a~~l~~~G~d~i~v~~~~~~~~~--~~~~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~gR~~l 327 (364)
T 1vyr_A 251 ADALYLIEELAKRGIAYLHMSETDLAGGK--PYSEAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAFGRDYI 327 (364)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCBTTBCC--CCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEESHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEecCcccCCC--cccHHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEECHHHH
Confidence 46888999999999999999998654322 236889999999999999999999 999999999765699999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.||+|+.+
T Consensus 328 ~~P~~~~~ 335 (364)
T 1vyr_A 328 ANPDLVAR 335 (364)
T ss_dssp HCTTHHHH
T ss_pred hChhHHHH
Confidence 99999987
No 6
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=100.00 E-value=5.8e-36 Score=284.22 Aligned_cols=238 Identities=13% Similarity=0.076 Sum_probs=190.3
Q ss_pred CCCCCceEEccccCCC---------CHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecc
Q 020428 1 MDYQNKLVLAPMVRVG---------TLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTC 71 (326)
Q Consensus 1 l~l~~~iilAPM~g~t---------~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (326)
++++||+++|||++++ +..++.+++++|+|+++||+++++......+ ...+.++-......+.+.+.+
T Consensus 14 ~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiite~~~v~~~g~~~~---~~~gi~~d~~i~~~~~l~~~v 90 (365)
T 2gou_A 14 LTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVSEGTQISPTAKGYA---WTPGIYTPEQIAGWRIVTEAV 90 (365)
T ss_dssp EEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCST---TCCBSSSHHHHHHHHHHHHHH
T ss_pred EEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEECceeecccccCCC---CCCccCCHHHHHHHHHHHHHH
Confidence 4689999999999874 5789999999999999999998764322111 111211100000112234556
Q ss_pred cCCCCcEEEEECC------------------------------------------CCH------------HHHHHHHHHh
Q 020428 72 HQERNHVVFQMGT------------------------------------------SDA------------VRALTAAKMV 97 (326)
Q Consensus 72 ~~~~~p~~vQl~g------------------------------------------~~~------------~~~~~aa~~~ 97 (326)
|+.+.++++||++ ..| ++|+++|+++
T Consensus 91 h~~g~~i~~QL~H~Gr~~~~~~~~g~~~~apS~i~~~~~~~~~~~~~g~~~~~~~~~p~~mt~~eI~~~i~~f~~aA~~a 170 (365)
T 2gou_A 91 HAKGCAIFAQLWHVGRVTHPDNIDGQQPISSSTLKAENVKVFVDNGSDEPGFVDVAVPRAMTKADIAQVIADYRQAALNA 170 (365)
T ss_dssp HHHSCEEEEEEECCTTSSCGGGTTTCCCEESSSCCCTTCEEEECCSSSSCEEEECCCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeecCCCcccccccCCCCccCCCCccccccccccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 7777899999974 123 7899999998
Q ss_pred hc-CCCEEEEccCC---------CccccccccccccccCChHHHHHHHHHHhhcccC-cEEEEecC-CC--------ChH
Q 020428 98 CK-DVAAIDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV-PVTCKIRL-LK--------SSQ 157 (326)
Q Consensus 98 ~~-~~d~idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~-pv~vK~r~-g~--------~~~ 157 (326)
.+ |||+||||++| |..+.+.++||++++++++++.+++++++++++. ||++|++. ++ +.+
T Consensus 171 ~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~~~~~~~ 250 (365)
T 2gou_A 171 MEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTVDADPIL 250 (365)
T ss_dssp HHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCCCSSHHH
T ss_pred HHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCCCCCCHH
Confidence 77 99999999998 8889999999999999999999999999999843 99999998 32 346
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
++.++++.++++|+|+|++|+++.... ....++.++++++.+++|||++||| |+++++++++..+||+||+||+++.
T Consensus 251 ~~~~~a~~l~~~G~d~i~v~~~~~~~~--~~~~~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~igR~~i~ 327 (365)
T 2gou_A 251 TYTAAAALLNKHRIVYLHIAEVDWDDA--PDTPVSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGFGRPFIA 327 (365)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCBTTBC--CCCCHHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEECCHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCC--CCccHHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehhcHHHHh
Confidence 789999999999999999999864321 1235788999999999999999999 9999999996555999999999999
Q ss_pred Ccccccc
Q 020428 238 NASIFSS 244 (326)
Q Consensus 238 ~P~lf~~ 244 (326)
||+|+.+
T Consensus 328 ~P~l~~~ 334 (365)
T 2gou_A 328 NPDLPER 334 (365)
T ss_dssp CTTHHHH
T ss_pred CchHHHH
Confidence 9999987
No 7
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=100.00 E-value=1e-35 Score=283.54 Aligned_cols=240 Identities=13% Similarity=0.092 Sum_probs=183.8
Q ss_pred CCCCCceEEccccCCC-------CHHHHHHHHHc-CCCeEEeCceecccccccccccccccCcccccccCCcceeeeccc
Q 020428 1 MDYQNKLVLAPMVRVG-------TLPFRLLAAQY-GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t-------~~~fr~~~~~~-G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (326)
++++||+++|||++++ +........+. |+|+++||+++++......+ ...+.++-......+.+.+..|
T Consensus 25 ~~l~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~g~GLiite~~~v~~~g~~~~---~~~gi~~d~~i~~~k~l~~avh 101 (376)
T 1icp_A 25 FELCHRVVLAPLTRQRSYGYIPQPHAILHYSQRSTNGGLLIGEATVISETGIGYK---DVPGIWTKEQVEAWKPIVDAVH 101 (376)
T ss_dssp EEESCSEEECCCCCCCCGGGSCCHHHHHHHHHTCCTTCEEECCCEECSGGGCCST---TCCBCSSHHHHHHHHHHHHHHH
T ss_pred EEECCccEECCcCcCcCCCCCCCHHHHHHHHHhcCCeeEEEECceeeccccccCc---ccCccCCHHHHHHHHHHHHHHH
Confidence 4689999999999875 23322233333 89999999998875322111 1122211000001122345567
Q ss_pred CCCCcEEEEECC--------------------------------------CCH------------HHHHHHHHHhhc-CC
Q 020428 73 QERNHVVFQMGT--------------------------------------SDA------------VRALTAAKMVCK-DV 101 (326)
Q Consensus 73 ~~~~p~~vQl~g--------------------------------------~~~------------~~~~~aa~~~~~-~~ 101 (326)
+.+.++++||++ ..| ++|+++|+++.+ ||
T Consensus 102 ~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~apS~~~~~~~~~~~~~~~~~~~~p~~mt~~eI~~~i~~f~~AA~~a~~aGf 181 (376)
T 1icp_A 102 AKGGIFFCQIWHVGRVSNKDFQPNGEDPISCTDRGLTPQIMSNGIDIAHFTRPRRLTTDEIPQIVNEFRVAARNAIEAGF 181 (376)
T ss_dssp HTTCEEEEEEECCTTSSCTTTSGGGCCCEESSSCCCCCEECTTSSCEECCCCCEECCTTTHHHHHHHHHHHHHHHHHTTC
T ss_pred hcCCeEEEEeecCCCCcCcccccCCCceecCCCCCCccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCC
Confidence 778899999975 122 689999999887 99
Q ss_pred CEEEEccCC---------CccccccccccccccCChHHHHHHHHHHhhcccC-cEEEEecCC-C--------ChHHHHHH
Q 020428 102 AAIDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV-PVTCKIRLL-K--------SSQDTVEL 162 (326)
Q Consensus 102 d~idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~-pv~vK~r~g-~--------~~~~~~e~ 162 (326)
|+||||++| |..|.+.++||++++++++++.+++++||++++. ||++|++.. + +.+++.++
T Consensus 182 DgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~~~~~~~~~~~l 261 (376)
T 1icp_A 182 DGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAGDTNPTALGLYM 261 (376)
T ss_dssp SEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCCSCHHHHHHHH
T ss_pred CEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCCCCHHHHHHH
Confidence 999999997 9999999999999999999999999999999843 999999963 1 23568999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccc
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIF 242 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf 242 (326)
++.++++|+|+|++|+++..+.+.+..+++.++++++.+++|||++||| |+++++++++..+||+||+||+++.||||+
T Consensus 262 a~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i-~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~ 340 (376)
T 1icp_A 262 VESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY-DREDGNRALIEDRADLVAYGRLFISNPDLP 340 (376)
T ss_dssp HHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHH
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHCCCCcEEeecHHHHhCccHH
Confidence 9999999999999999875433222245677889999999999999999 999999999766699999999999999999
Q ss_pred cc
Q 020428 243 SS 244 (326)
Q Consensus 243 ~~ 244 (326)
.+
T Consensus 341 ~k 342 (376)
T 1icp_A 341 KR 342 (376)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 8
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=100.00 E-value=8.4e-35 Score=273.78 Aligned_cols=241 Identities=16% Similarity=0.113 Sum_probs=188.3
Q ss_pred CCCCCceEEccccCCC---------CHHHHHHHHHc--CCCeEEeCceecccccccccccccccCcccccccCCcceeee
Q 020428 1 MDYQNKLVLAPMVRVG---------TLPFRLLAAQY--GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFR 69 (326)
Q Consensus 1 l~l~~~iilAPM~g~t---------~~~fr~~~~~~--G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (326)
++++||+++|||.... +........+. |+|+++||.+.++.-....+ ..++.++-......+.+.+
T Consensus 14 ~~l~NRiv~apm~~~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~---~~~~i~~d~~i~~~~~~~~ 90 (340)
T 3gr7_A 14 LTLKNRIVMSPMCMYSCDTKDGAVRTWHKIHYPARAVGQVGLIIVEATGVTPQGRISE---RDLGIWSDDHIAGLRELVG 90 (340)
T ss_dssp EEESSSEEECCCCCCCCTTSSSCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSST---TSEECSSTTHHHHHHHHHH
T ss_pred EEEcCceEECCcCCCcccCCCCCCCHHHHHHHHHHhcCCceEEEEcceEecccccCCC---CCcccCCHHHHHHHHHHHH
Confidence 4689999999998632 22333333333 78999999887765332111 1222221100011222466
Q ss_pred cccCCCCcEEEEECCCC-----------------------------------HHHHHHHHHHhhc-CCCEEEEccCC---
Q 020428 70 TCHQERNHVVFQMGTSD-----------------------------------AVRALTAAKMVCK-DVAAIDINMGC--- 110 (326)
Q Consensus 70 ~~~~~~~p~~vQl~g~~-----------------------------------~~~~~~aa~~~~~-~~d~idlN~gc--- 110 (326)
.+|+.+.++++||++.. .++|++||+++.+ |||+||||++|
T Consensus 91 ~vh~~G~~i~~QL~H~Gr~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyL 170 (340)
T 3gr7_A 91 LVKEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPTPKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYL 170 (340)
T ss_dssp HHHHTTCEEEEEEECCGGGCCSSSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCH
T ss_pred HHHhCCCeEEEEeccCCCccCCCCCccCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchH
Confidence 77888889999995310 3689999999987 99999999995
Q ss_pred ------CccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC------CChHHHHHHHHHHHHcCCcEEEEee
Q 020428 111 ------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL------KSSQDTVELARRIEKTGVSALAVHG 178 (326)
Q Consensus 111 ------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g------~~~~~~~e~a~~l~~~G~d~i~vh~ 178 (326)
|..|.+.++||++++++++++.+++++|+++++.||+||++.. ++.+++.++++.++++|+|+|+||.
T Consensus 171 l~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 250 (340)
T 3gr7_A 171 INEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSS 250 (340)
T ss_dssp HHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999999999999999973 5678999999999999999999994
Q ss_pred -cccCCC-C-CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 179 -RKVADR-P-RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 179 -r~~~~~-~-~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
++..+. + ....++++++++++.+++|||++|||+|+++++++++..+||+|++||+++.||+|+.+
T Consensus 251 g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~k 319 (340)
T 3gr7_A 251 GAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYA 319 (340)
T ss_dssp CCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHH
T ss_pred CCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHH
Confidence 433321 1 22347899999999999999999999999999999964449999999999999999886
No 9
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=100.00 E-value=2.2e-35 Score=283.22 Aligned_cols=238 Identities=13% Similarity=0.096 Sum_probs=185.8
Q ss_pred CCCCCceEEccccCCC---CHH-------HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeec
Q 020428 1 MDYQNKLVLAPMVRVG---TLP-------FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~t---~~~-------fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (326)
++++||+++|||.+++ +.+ |++.++ |+|+++||+++++......+ ...+.++-......+.+.+.
T Consensus 27 ~~L~NRiv~aPm~~~~a~~g~pt~~~~~yy~~rA~--G~GLIitE~~~v~~~g~~~~---~~~gi~~d~~i~~~k~l~~a 101 (402)
T 2hsa_B 27 FNLSHRVVLAPMTRCRALNNIPQAALGEYYEQRAT--AGGFLITEGTMISPTSAGFP---HVPGIFTKEQVREWKKIVDV 101 (402)
T ss_dssp EEESCSEEECCCCCCCSGGGCCCHHHHHHHHHHCC--TTCEEECCCEESSTTCCCST---TCCBCSSHHHHHHHHHHHHH
T ss_pred EEecCCeEECCCCCCcCCCCCCCHHHHHHHHHHhc--cCCEEEecceeeccccccCC---CCcccCCHHHHHHHHHHHHH
Confidence 4689999999999875 223 333332 69999999998864322111 11222110000011223455
Q ss_pred ccCCCCcEEEEECC----------------------------------------CCH------------HHHHHHHHHhh
Q 020428 71 CHQERNHVVFQMGT----------------------------------------SDA------------VRALTAAKMVC 98 (326)
Q Consensus 71 ~~~~~~p~~vQl~g----------------------------------------~~~------------~~~~~aa~~~~ 98 (326)
+|+.+.++++||++ ..| ++|++||+++.
T Consensus 102 vh~~G~~i~~QL~H~Gr~~~~~~~~~g~~~~apS~v~~~~~~~~~~~~g~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~ 181 (402)
T 2hsa_B 102 VHAKGAVIFCQLWHVGRASHEVYQPAGAAPISSTEKPISNRWRILMPDGTHGIYPKPRAIGTYEISQVVEDYRRSALNAI 181 (402)
T ss_dssp HHHTTCEEEEEEECCTTSCCGGGCTTCCCCEESCSCCCCTTCEEECTTSCEEECCCCEECCGGGHHHHHHHHHHHHHHHH
T ss_pred HHhcCCeEEEEeccCCcccccccccCCCccccCCCcccccccccccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 67788899999973 123 78999999988
Q ss_pred c-CCCEEEEccCC---------CccccccccccccccCChHHHHHHHHHHhhccc-CcEEEEecCC-C--------ChHH
Q 020428 99 K-DVAAIDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLD-VPVTCKIRLL-K--------SSQD 158 (326)
Q Consensus 99 ~-~~d~idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~g-~--------~~~~ 158 (326)
+ |||+||||++| |..|.+.++||++++++++++.+++++|+++++ .||++|++.+ + +.++
T Consensus 182 ~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~~~~~~~~ 261 (402)
T 2hsa_B 182 EAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAMDSNPLSL 261 (402)
T ss_dssp HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCCCSCHHHH
T ss_pred HcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCCCCCCHHH
Confidence 7 99999999997 999999999999999999999999999999984 4999999974 1 2367
Q ss_pred HHHHHHHHHHcC------CcEEEEeecccCCCCCCc--------CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc
Q 020428 159 TVELARRIEKTG------VSALAVHGRKVADRPRDP--------AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA 224 (326)
Q Consensus 159 ~~e~a~~l~~~G------~d~i~vh~r~~~~~~~~~--------~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~ 224 (326)
+.++++.++++| +|+|++|+++..+.+..+ .+++.++++++.+++|||+|||| |+++++++++..
T Consensus 262 ~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~~l~~g 340 (402)
T 2hsa_B 262 GLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGIEAVAQG 340 (402)
T ss_dssp HHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHCC
Confidence 899999999999 999999998765422222 25788899999999999999999 999999999766
Q ss_pred CCcEEEeccchhcCcccccc
Q 020428 225 GASSVMAARGALWNASIFSS 244 (326)
Q Consensus 225 Gad~VmiGr~~l~~P~lf~~ 244 (326)
+||+||+||+++.||+|+.+
T Consensus 341 ~aD~V~igR~~l~dP~l~~k 360 (402)
T 2hsa_B 341 DADLVSYGRLFISNPDLVMR 360 (402)
T ss_dssp SCSEEEESHHHHHCTTHHHH
T ss_pred CCceeeecHHHHhCchHHHH
Confidence 69999999999999999987
No 10
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=100.00 E-value=5e-34 Score=268.25 Aligned_cols=242 Identities=14% Similarity=0.115 Sum_probs=189.0
Q ss_pred CCCCCceEEccccCCC--------CHHHHHHHHHc--CCCeEEeCceecccccccccccccccCcccccccCCcceeeec
Q 020428 1 MDYQNKLVLAPMVRVG--------TLPFRLLAAQY--GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~t--------~~~fr~~~~~~--G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (326)
++++||+++|||.... +........+. |+|+++||.+.++.-....+ ..++.++-......+.+.+.
T Consensus 13 ~~l~NRiv~apm~~~~~~~~g~~t~~~~~yy~~rA~gG~Gliite~~~V~~~g~~~~---~~~gi~~d~~i~~~~~~~~~ 89 (343)
T 3kru_A 13 ITIKNRIMMSPMCMYSASTDGMPNDWHIVHYATRAIGGVGLIMQEATAVESRGRITD---HDLGIWNDEQVKELKKIVDI 89 (343)
T ss_dssp EEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSST---TSCBCSSHHHHHHHHHHHHH
T ss_pred eeeeeeecccchhheecccCCCCCceeeeeeehhhccceeeeeehhhhhhhcCcccc---ccccccCHHHHHHHHHHHHH
Confidence 4689999999998632 23333333333 78999999887765432111 22222221000112224667
Q ss_pred ccCCCCcEEEEECCC------------------------C------------HHHHHHHHHHhhc-CCCEEEEc------
Q 020428 71 CHQERNHVVFQMGTS------------------------D------------AVRALTAAKMVCK-DVAAIDIN------ 107 (326)
Q Consensus 71 ~~~~~~p~~vQl~g~------------------------~------------~~~~~~aa~~~~~-~~d~idlN------ 107 (326)
+|+.+.++++||+.. . .++|++||+++.+ |||+||||
T Consensus 90 vh~~G~~i~~QL~H~Gr~~~~~g~~~~apS~i~~~~~~~~p~~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYL 169 (343)
T 3kru_A 90 CKANGAVMGIQLAHAGRKCNISYEDVVGPSPIKAGDRYKLPRELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYL 169 (343)
T ss_dssp HHHTTCEEEEEEECCGGGCCCTTSCCEESSSCCSSTTSCCCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSH
T ss_pred HhcCCceEeeehhhccCccCcchhhccCCCcCCCCccccCchhcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchh
Confidence 788888999999531 0 3689999999987 99999999
Q ss_pred ---cCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC------CCChHHHHHHHHHHHHcCCcEEEE
Q 020428 108 ---MGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL------LKSSQDTVELARRIEKTGVSALAV 176 (326)
Q Consensus 108 ---~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~------g~~~~~~~e~a~~l~~~G~d~i~v 176 (326)
+.||..|.++++||++++++++++.+++++|++++ +.||++|++. |++.+++.++++.|+++ +|+|++
T Consensus 170 l~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~v 248 (343)
T 3kru_A 170 IHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDV 248 (343)
T ss_dssp HHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEE
T ss_pred HHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEec
Confidence 67999999999999999999999999999999999 6899999997 35678999999999999 999999
Q ss_pred -eecccCCCC--CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccccC
Q 020428 177 -HGRKVADRP--RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSSQG 246 (326)
Q Consensus 177 -h~r~~~~~~--~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~~~ 246 (326)
+|++..+.. ....+++.++++++.+++|||++|||+|+++++++++..+||+|++||+++.||+|+.+..
T Consensus 249 s~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~iGR~~lanPdl~~k~~ 321 (343)
T 3kru_A 249 SSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVALGRELLRNPYWVLHTY 321 (343)
T ss_dssp ECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHTC
T ss_pred cCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHHHHHHHhcCCeEEEEEe
Confidence 577654321 1234789999999999999999999999999999996555999999999999999998753
No 11
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=100.00 E-value=3.1e-33 Score=264.30 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=188.4
Q ss_pred CCCCCceEEccccCCC--------CHHHHHHHHHc--CCCeEEeCceecccccccccccccccCcccccccCCcceeeec
Q 020428 1 MDYQNKLVLAPMVRVG--------TLPFRLLAAQY--GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~t--------~~~fr~~~~~~--G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (326)
++++||+++|||..+. +........+. |+|+++||.+.++.-....+ ...+.++-......+.+.+.
T Consensus 13 ~~l~NRiv~apm~~~~~~~~g~~~~~~~~~y~~rA~gg~Glii~e~~~v~~~g~~~~---~~~~i~~d~~i~~~~~~~~~ 89 (349)
T 3hgj_A 13 LRLKNRLAMSPMCQYSATLEGEVTDWHLLHYPTRALGGVGLILVEATAVEPLGRISP---YDLGIWSEDHLPGLKELARR 89 (349)
T ss_dssp EEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSST---TSCBCSSGGGHHHHHHHHHH
T ss_pred EEecCceEECCcCcCCcCCCCCCCHHHHHHHHHHhcCCceEEEecceeecccccCCC---CcCccCcHHHHHHHHHHHHH
Confidence 4689999999998642 23333333333 78999999888765432111 12222221000112224566
Q ss_pred ccCCCCcEEEEECC-----C----------------------------C------------HHHHHHHHHHhhc-CCCEE
Q 020428 71 CHQERNHVVFQMGT-----S----------------------------D------------AVRALTAAKMVCK-DVAAI 104 (326)
Q Consensus 71 ~~~~~~p~~vQl~g-----~----------------------------~------------~~~~~~aa~~~~~-~~d~i 104 (326)
+|+.+.++++||++ . . .++|+++|+++.+ |||+|
T Consensus 90 vh~~G~~i~~Ql~H~Gr~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgV 169 (349)
T 3hgj_A 90 IREAGAVPGIQLAHAGRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRALRAGFQVI 169 (349)
T ss_dssp HHHTTCEEEEEEECCGGGCCBCCGGGTCCBCCCCCEESSSCCSSTTCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHhCCCeEEEEeccCCccccccccccccccCCCcccCCCcccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 78888889999952 0 0 3689999999987 99999
Q ss_pred EEccCC---------CccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC------CCChHHHHHHHHHHH
Q 020428 105 DINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL------LKSSQDTVELARRIE 167 (326)
Q Consensus 105 dlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~------g~~~~~~~e~a~~l~ 167 (326)
|||++| |..|.+.++||++++++++++.+++++|++++ +.||.+|++. |++.+++.++++.++
T Consensus 170 Eih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~ 249 (349)
T 3hgj_A 170 ELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLK 249 (349)
T ss_dssp EEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHH
T ss_pred EECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHH
Confidence 999999 99999999999999999999999999999999 7899999997 577889999999999
Q ss_pred HcCCcEEEEe-ecccCCC--CC-CcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 168 KTGVSALAVH-GRKVADR--PR-DPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 168 ~~G~d~i~vh-~r~~~~~--~~-~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
++|+|+|+++ |+..... +. ...+++.++++++.+++|||++|||+|+++++++++...||+|++||+++.||+|+.
T Consensus 250 ~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~ 329 (349)
T 3hgj_A 250 ELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPL 329 (349)
T ss_dssp HTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHH
T ss_pred HcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHH
Confidence 9999999999 4443221 11 235789999999999999999999999999999996444999999999999999987
Q ss_pred c
Q 020428 244 S 244 (326)
Q Consensus 244 ~ 244 (326)
+
T Consensus 330 k 330 (349)
T 3hgj_A 330 R 330 (349)
T ss_dssp H
T ss_pred H
Confidence 6
No 12
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-33 Score=272.50 Aligned_cols=237 Identities=13% Similarity=0.085 Sum_probs=188.2
Q ss_pred CCCCCceEEccccCC--------CCHHHHHHHHHc-CCCeEEeCceecccccccccccccccCccc--ccccCCcceeee
Q 020428 1 MDYQNKLVLAPMVRV--------GTLPFRLLAAQY-GADITYGEEIIDHKLLKCERRVNEYIGSTD--FVEKGTDSVVFR 69 (326)
Q Consensus 1 l~l~~~iilAPM~g~--------t~~~fr~~~~~~-G~~l~~te~i~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 69 (326)
++++|||++|||... |+.......++. |+|+++||.+.++......+ ..++.++ +++ ..+.+.+
T Consensus 37 ~~lkNRiv~aPm~~~~a~~dg~~t~~~~~yy~~rA~G~GLiIte~~~V~~~g~~~~---~~~gi~~d~~i~--~~k~l~~ 111 (419)
T 3l5a_A 37 IKISNRFVLSPMTVNASTKEGYITKADLAYAARRSNSAGMQVTGAAYIEPYGKLFE---YGFNIDHDACIP--GLTNMAS 111 (419)
T ss_dssp CEESSSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSCSEEEEEEEESSGGGCCST---TCEECSSGGGHH--HHHHHHH
T ss_pred CEECCCeEeCCCCCCccCCCCCCCHHHHHHHHHHhcCCcEEEecceEeCcccccCC---CccccccHHHHH--HHHHHHH
Confidence 578999999999863 333444444444 79999999888765432211 1222221 111 1222466
Q ss_pred cccCCCCcEEEEECCCC----------------------------------------HHHHHHHHHHhhc-CCCEEEEcc
Q 020428 70 TCHQERNHVVFQMGTSD----------------------------------------AVRALTAAKMVCK-DVAAIDINM 108 (326)
Q Consensus 70 ~~~~~~~p~~vQl~g~~----------------------------------------~~~~~~aa~~~~~-~~d~idlN~ 108 (326)
.+|+.+.++++||+... .++|++||+++.+ |||+||||+
T Consensus 112 avh~~G~~i~~QL~H~Gr~~~~~~~~~~~~vapS~i~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ 191 (419)
T 3l5a_A 112 TMKQHGSLAIIQLAHAGRFSNQAILNFGKVYGPSPMTLHSPIEHVVIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISI 191 (419)
T ss_dssp HHHTTSCEEEEEEECCGGGCHHHHHHHSEEEESSCEEECSSSSEEEEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHhcCCEEEEEeccCCCcccccccCCCceeCCCCCccccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 77888889999996311 2689999999987 999999999
Q ss_pred CC---------Cccccccccccccc-cCChHHHHHHHHHHhhcc------cCcEEEEecC--------CCChHHHHHHHH
Q 020428 109 GC---------PKSFSVSGGMGAAL-LSKPELIHDILTMLKRNL------DVPVTCKIRL--------LKSSQDTVELAR 164 (326)
Q Consensus 109 gc---------P~~~~~~~~~G~~l-~~~p~~~~~iv~~v~~~~------~~pv~vK~r~--------g~~~~~~~e~a~ 164 (326)
+| |..|.|.++||+++ +++++++.+++++|++++ +.||++|++. |++.+++.++++
T Consensus 192 ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~ 271 (419)
T 3l5a_A 192 AQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFILGFRATPEETRGSDLGYTIDEFNQLID 271 (419)
T ss_dssp CTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHH
T ss_pred ccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCeeEEEecccccccCCCCCCCHHHHHHHHH
Confidence 98 99999999999999 999999999999999987 6799999998 567889999999
Q ss_pred HHHH-cCCcEEEEeeccc-----CCCCCCc-CCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 165 RIEK-TGVSALAVHGRKV-----ADRPRDP-AKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 165 ~l~~-~G~d~i~vh~r~~-----~~~~~~~-~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
.|++ +|+|+|+||+++. ...+.++ .+++.++.+++.+ ++|||++|||+|+++++++++ . ||+|++||++
T Consensus 272 ~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~GgI~t~e~Ae~~L~-~-aDlVaiGR~~ 349 (419)
T 3l5a_A 272 WVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIASGGINSPESALDALQ-H-ADMVGMSSPF 349 (419)
T ss_dssp HHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEECSSCCSHHHHHHHGG-G-CSEEEESTHH
T ss_pred HHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEECCCCCHHHHHHHHH-h-CCcHHHHHHH
Confidence 9999 9999999999864 1222233 3677889999988 699999999999999999996 4 9999999999
Q ss_pred hcCcccccc
Q 020428 236 LWNASIFSS 244 (326)
Q Consensus 236 l~~P~lf~~ 244 (326)
+.||+|+.+
T Consensus 350 IanPdlv~k 358 (419)
T 3l5a_A 350 VTEPDFVHK 358 (419)
T ss_dssp HHCTTHHHH
T ss_pred HHCcHHHHH
Confidence 999999987
No 13
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=100.00 E-value=8.4e-33 Score=282.31 Aligned_cols=241 Identities=16% Similarity=0.152 Sum_probs=189.6
Q ss_pred CCCCCceEEccccC-CCC--HHHHHHHHHc------CCCeEEeCceecccccccccccccccCcccccccCCcceeeecc
Q 020428 1 MDYQNKLVLAPMVR-VGT--LPFRLLAAQY------GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTC 71 (326)
Q Consensus 1 l~l~~~iilAPM~g-~t~--~~fr~~~~~~------G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (326)
++++||+++|||.+ .++ .+++.++..| |+|+++||+++++......+ ...+.++-......+.+.+..
T Consensus 14 ~~l~nRi~~apm~~~~~~~~~~~~~~~~~y~~ra~gg~gliite~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~v 90 (671)
T 1ps9_A 14 TTLKNRVLMGSMHTGLEEYPDGAERLAAFYAERARHGVALIVSGGIAPDLTGVGME---GGAMLNDASQIPHHRTITEAV 90 (671)
T ss_dssp CEESSSEEECCCCCSCTTSTTHHHHHHHHHHHHHHTTCSEEEEEEEBSSSTTCSBT---TCCBCCSGGGHHHHHHHHHHH
T ss_pred EEEcCceEECCccCCcCCCCCCcHHHHHHHHHHhcCCCCEEEecccccCccccCCC---CCCccCCHHHHHHHHHHHHHH
Confidence 56899999999997 444 2344444443 89999999998764322111 112222110000112234456
Q ss_pred cCCCCcEEEEECCC----------------------CH------------HHHHHHHHHhhc-CCCEEEEccCC------
Q 020428 72 HQERNHVVFQMGTS----------------------DA------------VRALTAAKMVCK-DVAAIDINMGC------ 110 (326)
Q Consensus 72 ~~~~~p~~vQl~g~----------------------~~------------~~~~~aa~~~~~-~~d~idlN~gc------ 110 (326)
|+.+.++++||++. .| ++|+++|+++.+ |||+||||++|
T Consensus 91 h~~g~~i~~Ql~h~Gr~~~~~~~~~ps~~~~~~~~~~p~~~t~~ei~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~q 170 (671)
T 1ps9_A 91 HQEGGKIALQILHTGRYSYQPHLVAPSALQAPINRFVPHELSHEEILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINE 170 (671)
T ss_dssp HHTTCCEEEEECCCGGGSBSTTCEESSSCCCTTCSSCCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHH
T ss_pred HhcCCEEEEEeccCCcccCCCCCcCCCCcccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHH
Confidence 77788999999873 23 689999999887 99999999997
Q ss_pred ---CccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC------CCChHHHHHHHHHHHHcCCcEEEEeec
Q 020428 111 ---PKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL------LKSSQDTVELARRIEKTGVSALAVHGR 179 (326)
Q Consensus 111 ---P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~------g~~~~~~~e~a~~l~~~G~d~i~vh~r 179 (326)
|..|.+.++||++++++++++.++++++|+++ +.||++|++. |++.+++.++++.++++|+|+|++|++
T Consensus 171 Flsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~ 250 (671)
T 1ps9_A 171 FLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIG 250 (671)
T ss_dssp HHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred hCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCC
Confidence 88999999999999999999999999999999 7899999996 567789999999999999999999987
Q ss_pred ccCCC------CCCc-CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 180 KVADR------PRDP-AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 180 ~~~~~------~~~~-~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
+.... +.++ ..++.++++++.+++||+++|||.|+++++++++..+||+|++||+++.||+|+.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD~V~~gR~~l~~P~l~~k 322 (671)
T 1ps9_A 251 WHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSK 322 (671)
T ss_dssp BTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHHCTTHHHH
T ss_pred ccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCCEEEeCHHHHhCcHHHHH
Confidence 65422 1222 34688999999999999999999999999999965559999999999999999986
No 14
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=100.00 E-value=1.7e-32 Score=255.46 Aligned_cols=238 Identities=14% Similarity=0.098 Sum_probs=183.1
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccccc-ccccccc----cCcccccccCCcce--eeeccc-
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLLKC-ERRVNEY----IGSTDFVEKGTDSV--VFRTCH- 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~-~~~~~~~----~~~~~~~~~~~~~~--~~~~~~- 72 (326)
++++||+++||..--.+.+++..+.+.|+|++.|++++.++.... .+...+. +....+-+...... .+....
T Consensus 9 ~~l~npv~~Aag~~~~~~~~~~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 88 (311)
T 1jub_A 9 AKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQK 88 (311)
T ss_dssp EEESSSEEECTTSSCSSHHHHHHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHHHH
T ss_pred EEcCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCccHHHHHHHHHHHHH
Confidence 368999999974311389999999999999999999998874221 1100000 00011111100000 011111
Q ss_pred CC--CCcEEEEECCCCHHHHHHHHHHhhc-CCC-EEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE
Q 020428 73 QE--RNHVVFQMGTSDAVRALTAAKMVCK-DVA-AIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC 148 (326)
Q Consensus 73 ~~--~~p~~vQl~g~~~~~~~~aa~~~~~-~~d-~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v 148 (326)
.. +.|+++||+|.+++++.++++.+.+ |+| +||||++||+.. .|..+..+++.+.++++++++.+++||++
T Consensus 89 ~~~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~-----g~~~~g~~~e~~~~iv~~vr~~~~~Pv~v 163 (311)
T 1jub_A 89 ENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-----GEPQLAYDFEATEKLLKEVFTFFTKPLGV 163 (311)
T ss_dssp HTCSSSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSS-----SCCCGGGCHHHHHHHHHHHTTTCCSCEEE
T ss_pred hcCCCCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCC-----CcccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 12 4699999999999999999999987 899 999999999972 25667779999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCcEEEEeeccc-----C--------------CCCCCc----CCHHHHHHHHHhc--CC
Q 020428 149 KIRLLKSSQDTVELARRIEKTGVSALAVHGRKV-----A--------------DRPRDP----AKWGEIADIVAAL--SI 203 (326)
Q Consensus 149 K~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~-----~--------------~~~~~~----~~~~~i~~i~~~~--~i 203 (326)
|++.+++.++..++++.++++|+|+|++|+++. + +.++++ ..++.++++++.+ ++
T Consensus 164 Ki~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~i 243 (311)
T 1jub_A 164 KLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEI 243 (311)
T ss_dssp EECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTS
T ss_pred EECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCC
Confidence 999988888899999999999999999998851 1 112233 2478899999999 89
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc-Ccccccc
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMAARGALW-NASIFSS 244 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~-~P~lf~~ 244 (326)
|||++|||+|++|+.+++ ..|||+||+||+++. +||+|.+
T Consensus 244 pvi~~GGI~~~~da~~~l-~~GAd~V~vg~~~l~~~p~~~~~ 284 (311)
T 1jub_A 244 QIIGTGGIETGQDAFEHL-LCGATMLQIGTALHKEGPAIFDR 284 (311)
T ss_dssp EEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHHCTHHHHH
T ss_pred CEEEECCCCCHHHHHHHH-HcCCCEEEEchHHHhcCcHHHHH
Confidence 999999999999999999 589999999999996 9999876
No 15
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=99.98 E-value=2.9e-32 Score=258.87 Aligned_cols=241 Identities=15% Similarity=0.145 Sum_probs=186.5
Q ss_pred CCCCCceEEccccCC-------CCHHHHHHHHHc--CCCeEEeCceecccccccccccccccCcccccccCCcceeeecc
Q 020428 1 MDYQNKLVLAPMVRV-------GTLPFRLLAAQY--GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTC 71 (326)
Q Consensus 1 l~l~~~iilAPM~g~-------t~~~fr~~~~~~--G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (326)
++++||+++|||..+ |+........+. |+|+++||.+.++.-....+ ..++.++-......+.+.+.+
T Consensus 13 ~~l~NRiv~apm~~~~~~~g~~~~~~~~~y~~rA~gG~Glii~e~~~v~~~g~~~~---~~~~i~~d~~i~~~~~~~~~v 89 (363)
T 3l5l_A 13 VTLRNRIAIPPMCQYMAEDGMINDWHHVHLAGLARGGAGLLVVEATAVAPEGRITP---GCAGIWSDAHAQAFVPVVQAI 89 (363)
T ss_dssp EEESSSEEECCCCCCCCBTTBCCHHHHHHHHHHHHTTCSEEEEEEEESSGGGCSST---TCCBCSSHHHHHHHHHHHHHH
T ss_pred EEeeCceEECCCCCCcCCCCCCCHHHHHHHHHHHccCceEEEecceeeCccccCCC---CcceecCHHHHHHHHHHHHHH
Confidence 468999999999864 334444444443 78999999888765432211 122222210001112245667
Q ss_pred cCCCCcEEEEECC-----C---------------------------------C--------------HHHHHHHHHHhhc
Q 020428 72 HQERNHVVFQMGT-----S---------------------------------D--------------AVRALTAAKMVCK 99 (326)
Q Consensus 72 ~~~~~p~~vQl~g-----~---------------------------------~--------------~~~~~~aa~~~~~ 99 (326)
|+.+..+++||++ + . .++|++||+++.+
T Consensus 90 h~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~pS~~~~~~~~~~~p~~mt~~eI~~ii~~f~~aA~~a~~ 169 (363)
T 3l5l_A 90 KAAGSVPGIQIAHAGRKASANRPWEGDDHIAADDTRGWETIAPSAIAFGAHLPKVPREMTLDDIARVKQDFVDAARRARD 169 (363)
T ss_dssp HHTTCEEEEEEECCGGGCSBCCGGGTSSBCCTTCTTCCCCEESSSCCCBTTBCCCCEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEeccCCccccccccccccccccccccCCCcccCCCCCccCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence 7778888999852 1 0 2579999999987
Q ss_pred -CCCEEEEccC---------CCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC-------CChHHHH
Q 020428 100 -DVAAIDINMG---------CPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL-------KSSQDTV 160 (326)
Q Consensus 100 -~~d~idlN~g---------cP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g-------~~~~~~~ 160 (326)
|||+||||++ ||..|.+.++||+++.++++++.++++++++++ +.||.+|++.. ++.+++.
T Consensus 170 aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~ 249 (363)
T 3l5l_A 170 AGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLEESI 249 (363)
T ss_dssp HTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHH
T ss_pred cCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHHHHH
Confidence 9999999998 699999999999999999999999999999998 58999999973 4567899
Q ss_pred HHHHHHHHcCCcEEEEeecccCCC---CCCc-CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 161 ELARRIEKTGVSALAVHGRKVADR---PRDP-AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~---~~~~-~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
++++.++++|+|+|++++++.... ..++ .+++.++++++.+++|||++|||+|+++++++++..+||+|++||+++
T Consensus 250 ~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD~V~iGR~~l 329 (363)
T 3l5l_A 250 ELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLDLVSVGRAHL 329 (363)
T ss_dssp HHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCSEEECCHHHH
T ss_pred HHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCccEEEecHHHH
Confidence 999999999999999997643211 1222 478899999999999999999999999999999644499999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.||+|+.+
T Consensus 330 anPdl~~k 337 (363)
T 3l5l_A 330 ADPHWAYF 337 (363)
T ss_dssp HCTTHHHH
T ss_pred hCchHHHH
Confidence 99999876
No 16
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=99.98 E-value=3.2e-32 Score=257.41 Aligned_cols=232 Identities=13% Similarity=0.119 Sum_probs=180.8
Q ss_pred CCCCCceEEccccCCC--------CHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeeccc
Q 020428 1 MDYQNKLVLAPMVRVG--------TLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t--------~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (326)
++++|||++|||.... +........+..+|+++||.+.++.-....+ ...+.++-......+.+.+.+|
T Consensus 13 ~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~---~~~gi~~d~~i~~~k~l~~avH 89 (362)
T 4ab4_A 13 LQLPNRIIMAPLTRCRADEGRVPNALMAEYYVQRASAGLILSEATSVSPMGVGYP---DTPGIWNDEQVRGWNNVTKAVH 89 (362)
T ss_dssp EEESCSEEECCCCCCCCBTTTBCCHHHHHHHHHTTTSSEEEEEEEESSGGGCCST---TCCBCSSHHHHHHHHHHHHHHH
T ss_pred EEeeCccEECCccCCccCCCCCCCHHHHHHHHHHHhhCEEeeeeeEecccccCCC---CCCCcCCHHHHHHHHHHHHHHH
Confidence 4689999999998642 3344455555568999999887765432211 1222221000011222456677
Q ss_pred CCCCcEEEEECCC------------------------------------C------------HHHHHHHHHHhhc-CCCE
Q 020428 73 QERNHVVFQMGTS------------------------------------D------------AVRALTAAKMVCK-DVAA 103 (326)
Q Consensus 73 ~~~~p~~vQl~g~------------------------------------~------------~~~~~~aa~~~~~-~~d~ 103 (326)
+.+.++++||+.. . .++|++||+++.+ |||+
T Consensus 90 ~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~f~~AA~~a~~aGfDg 169 (362)
T 4ab4_A 90 AAGGRIFLQLWHVGRISHPSYLNGELPVAPSAIQPKGHVSLVRPLSDYPTPRALETEEINDIVEAYRSGAENAKAAGFDG 169 (362)
T ss_dssp HTTCCEEEEEECCTTSCCGGGTTTCCCEESSCCCCSSBCSSCSSCCBCCCCEECCHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred hcCCEEEEEeccCcccccccccCCCcccCCCCCCCCccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 7888899999520 0 2578999999987 9999
Q ss_pred EEEccCC---------CccccccccccccccCChHHHHHHHHHHhhccc-CcEEEEecCCC--------C-hHHHHHHHH
Q 020428 104 IDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLD-VPVTCKIRLLK--------S-SQDTVELAR 164 (326)
Q Consensus 104 idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~g~--------~-~~~~~e~a~ 164 (326)
||||++| |..|.+.++||++++++++++.+++++|+++++ -||++|++... + .+++.++++
T Consensus 170 VEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~ 249 (362)
T 4ab4_A 170 VEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMGDADRAETFTYVAR 249 (362)
T ss_dssp EEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCTTHHHHHHHHHH
T ss_pred EEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccCCCCcHHHHHHHHH
Confidence 9999998 999999999999999999999999999999984 39999999741 1 356899999
Q ss_pred HHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 165 RIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 165 ~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
.++++|+|+|++|+++. ++ +.++++++.+++|||++||| |+++++++++..+||+|++||+++.||+|+.+
T Consensus 250 ~l~~~Gvd~i~v~~~~~-----~~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~g~aD~V~iGR~~lanPdl~~k 320 (362)
T 4ab4_A 250 ELGKRGIAFICSREREA-----DD---SIGPLIKEAFGGPYIVNERF-DKASANAALASGKADAVAFGVPFIANPDLPAR 320 (362)
T ss_dssp HHHHTTCSEEEEECCCC-----TT---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHHHhCCCEEEECCCCC-----CH---HHHHHHHHHCCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHH
Confidence 99999999999999861 22 35788899999999999999 99999999976669999999999999999987
No 17
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=99.98 E-value=7.4e-32 Score=251.47 Aligned_cols=238 Identities=13% Similarity=0.066 Sum_probs=183.1
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccccc-cccccc----ccCcccccccCCccee--eecc-c
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLLKC-ERRVNE----YIGSTDFVEKGTDSVV--FRTC-H 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~-~~~~~~----~~~~~~~~~~~~~~~~--~~~~-~ 72 (326)
++++||+++||+.--.+..++..+.+.|+|++.|+++++++.... .+...+ .+....+-+....... ++.. .
T Consensus 11 ~~l~nPi~~Aag~~~~~~~~~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g~~~~~~~~~~~~~ 90 (314)
T 2e6f_A 11 HVFANPFMNAAGVLCSTEEDLRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPNLGFDFYLKYASDLHD 90 (314)
T ss_dssp EEESSSEEECTTSSCSSHHHHHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSCHHHHHHHHHHTCC
T ss_pred EecCCCcEECCCCCCCCHHHHHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcCHHHHHHHHHHHhh
Confidence 368999999986622468888888999999999999998874211 110000 0000011111111000 1111 1
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhhc-CCC---EEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVCK-DVA---AIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC 148 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~~-~~d---~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v 148 (326)
..+.|+++||+|.+++++.++++.+.+ |+| +||||++||+.. .+..+..+++.+.++++++++.+++||++
T Consensus 91 ~~~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~-----g~~~~g~~~~~~~~ii~~vr~~~~~Pv~v 165 (314)
T 2e6f_A 91 YSKKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVP-----GKPQVAYDFEAMRTYLQQVSLAYGLPFGV 165 (314)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCST-----TCCCGGGSHHHHHHHHHHHHHHHCSCEEE
T ss_pred cCCCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCC-----CchhhcCCHHHHHHHHHHHHHhcCCCEEE
Confidence 134699999999999999999999987 889 999999999972 25566778999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcC-CcEEEEeeccc-----C--------------CCCCCc----CCHHHHHHHHHhc-CC
Q 020428 149 KIRLLKSSQDTVELARRIEKTG-VSALAVHGRKV-----A--------------DRPRDP----AKWGEIADIVAAL-SI 203 (326)
Q Consensus 149 K~r~g~~~~~~~e~a~~l~~~G-~d~i~vh~r~~-----~--------------~~~~~~----~~~~~i~~i~~~~-~i 203 (326)
|++.+++.++..++++.++++| +|+|++|+++. + +.++++ ..++.++++++.+ ++
T Consensus 166 K~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~i 245 (314)
T 2e6f_A 166 KMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDK 245 (314)
T ss_dssp EECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTS
T ss_pred EECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCC
Confidence 9999888888999999999999 99999999761 1 111232 3478999999999 99
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc-Ccccccc
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMAARGALW-NASIFSS 244 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~-~P~lf~~ 244 (326)
|||++|||+|++|+.+++ ..|||+||+||+++. +||+|.+
T Consensus 246 pvi~~GGI~~~~da~~~l-~~GAd~V~ig~~~l~~~p~~~~~ 286 (314)
T 2e6f_A 246 LVFGCGGVYSGEDAFLHI-LAGASMVQVGTALQEEGPGIFTR 286 (314)
T ss_dssp EEEEESSCCSHHHHHHHH-HHTCSSEEECHHHHHHCTTHHHH
T ss_pred CEEEECCCCCHHHHHHHH-HcCCCEEEEchhhHhcCcHHHHH
Confidence 999999999999999999 589999999999996 9999886
No 18
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.98 E-value=2e-32 Score=281.89 Aligned_cols=240 Identities=12% Similarity=0.029 Sum_probs=186.2
Q ss_pred CCCCCceEEccccCCC--CHH------HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeeccc
Q 020428 1 MDYQNKLVLAPMVRVG--TLP------FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t--~~~------fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (326)
++++||+++|||.+.. +.+ |+..+ +.|+|+++||+++++......+. ...+.++-......+.+.+..|
T Consensus 18 ~~l~NRiv~apm~~~~~~~~~~~~~~~y~~ra-~gG~Gliite~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~vh 94 (729)
T 1o94_A 18 KTLRNRFYQVPHCIGAGSDKPGFQSAHRSVKA-EGGWAALNTEYCSINPESDDTHR--LSARIWDEGDVRNLKAMTDEVH 94 (729)
T ss_dssp EEESSSEEECCCCCSCTTTCHHHHHHHHHHHH-HTTCSEEEEEEEESSTTSCCTTS--CCEECSSHHHHHHHHHHHHHHH
T ss_pred EEECCccEECCCcCCcCCCCcHHHHHHHHHHh-cCCCCEEEEcceEecCcccCCCC--CCCccCChHHhHHHHHHHHHHH
Confidence 4689999999998753 233 22222 34799999999988643221110 0111111000001122345567
Q ss_pred CCCCcEEEEECCC---------------------------C------------HHHHHHHHHHhhc-CCCEEEEccCC--
Q 020428 73 QERNHVVFQMGTS---------------------------D------------AVRALTAAKMVCK-DVAAIDINMGC-- 110 (326)
Q Consensus 73 ~~~~p~~vQl~g~---------------------------~------------~~~~~~aa~~~~~-~~d~idlN~gc-- 110 (326)
+.+.++++||++. . .++|++||+++.+ |||+||||++|
T Consensus 95 ~~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~p~~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gy 174 (729)
T 1o94_A 95 KYGALAGVELWYGGAHAPNMESRATPRGPSQYASEFETLSYCKEMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSY 174 (729)
T ss_dssp TTTCEEEEEEECCGGGSCCTTTCCCCEESSCCBCSSSTTCBCEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTC
T ss_pred hCCCeEEEEecCCCccccccccCCCCcCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccch
Confidence 8888999999872 1 3789999999987 99999999999
Q ss_pred -------CccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC-------CCC-hHHHHHHHHHHHHcCCcE
Q 020428 111 -------PKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL-------LKS-SQDTVELARRIEKTGVSA 173 (326)
Q Consensus 111 -------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~-------g~~-~~~~~e~a~~l~~~G~d~ 173 (326)
|..|.+.++||++++++++++.+++++|++++ +.||++|++. |++ .+++.++++.+++ |+|+
T Consensus 175 Ll~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~-~~d~ 253 (729)
T 1o94_A 175 LPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDCAIATRFGVDTVYGPGQIEAEVDGQKFVEMADS-LVDM 253 (729)
T ss_dssp HHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECSSCTTSCCTTTHHHHHHHHHGG-GCSE
T ss_pred HHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccCcCCCCCCchHHHHHHHHHHHh-hcCE
Confidence 99999999999999999999999999999999 7899999985 455 5688999999988 7999
Q ss_pred EEEeeccc--------CCCCCCc-CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 174 LAVHGRKV--------ADRPRDP-AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 174 i~vh~r~~--------~~~~~~~-~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
|.+|++.. ...+.++ .+++.++++++.+++|||++|||.|+++++++++..+||+||+||+++.||+|+.+
T Consensus 254 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~aD~V~~gR~~l~~P~~~~~ 333 (729)
T 1o94_A 254 WDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTDPEKMIEIVTKGYADIIGCARPSIADPFLPQK 333 (729)
T ss_dssp EEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCCHHHHHHHHHTTSCSBEEESHHHHHCTTHHHH
T ss_pred EEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHCCCCCEEEeCchhhcCchHHHH
Confidence 99998741 1122222 26889999999999999999999999999999976669999999999999999987
No 19
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=99.97 E-value=5.8e-32 Score=255.56 Aligned_cols=232 Identities=13% Similarity=0.104 Sum_probs=180.5
Q ss_pred CCCCCceEEccccCCC--------CHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeeccc
Q 020428 1 MDYQNKLVLAPMVRVG--------TLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t--------~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (326)
++++|||++|||.... +........+..+|+++||.+.++......+ ...+.++-......+.+.+.+|
T Consensus 21 ~~lkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~~GLIite~~~V~~~g~~~~---~~~gi~~d~~i~~~k~l~~avH 97 (361)
T 3gka_A 21 LTLANRIIMAPLTRARAGDTRTPNALMARYYAERASAGLIISEATSVTPQGVGYA---STPGIWSPEQVDGWRLVTDAVH 97 (361)
T ss_dssp EEESCSEEECCCCCCCSTTTTCCCHHHHHHHHTTTTSSEEEEEEEESSGGGCCST---TCCBSSSHHHHHHHHHHHHHHH
T ss_pred EEecCccEECCCCCCccCCCCCCCHHHHHHHHHHHhCCEEEEcceeecccccCCC---CCCccCCHHHHHHHHHHHHHHH
Confidence 4689999999998642 2334444444458999999888765432211 1222221000011222456677
Q ss_pred CCCCcEEEEECC--C----------------------------------C------------HHHHHHHHHHhhc-CCCE
Q 020428 73 QERNHVVFQMGT--S----------------------------------D------------AVRALTAAKMVCK-DVAA 103 (326)
Q Consensus 73 ~~~~p~~vQl~g--~----------------------------------~------------~~~~~~aa~~~~~-~~d~ 103 (326)
+.+.++++||+. . . .++|++||+++.+ |||+
T Consensus 98 ~~G~~i~~QL~H~Gr~~~~~~~~g~~~vapS~i~~~~~~~~~~g~~~~~~pr~mt~~eI~~ii~~f~~AA~~A~~aGfDg 177 (361)
T 3gka_A 98 AAGGRIFLQLWHVGRVSDPVFLDGALPVAPSAIAPGGHVSLVRPQRPYVTPRALELDEIPGVVAAFRRGAENARAAGFDG 177 (361)
T ss_dssp HTTCCEEEEEECCTTSCCGGGTTTCCCEESSSCCCSSBCSSCSSCCBCCCCEECCGGGHHHHHHHHHHHHHHHHHTTCSE
T ss_pred hcCCeEEEeeccCCccccccccCCCCcccCCCCCCCCcccccccccCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 788889999952 0 0 2579999999987 9999
Q ss_pred EEEccCC---------CccccccccccccccCChHHHHHHHHHHhhcccC-cEEEEecCCC---------ChHHHHHHHH
Q 020428 104 IDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV-PVTCKIRLLK---------SSQDTVELAR 164 (326)
Q Consensus 104 idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~-pv~vK~r~g~---------~~~~~~e~a~ 164 (326)
||||++| |..|.+.++||++++++++++.+++++||++++. ||++|++... +.+++.++++
T Consensus 178 VEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~la~ 257 (361)
T 3gka_A 178 VEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMGDSDPAATFGHVAR 257 (361)
T ss_dssp EEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCCCSCHHHHHHHHHH
T ss_pred EEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCCCCCcHHHHHHHHH
Confidence 9999998 9999999999999999999999999999999843 9999999731 1357899999
Q ss_pred HHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 165 RIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 165 ~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
.++++|+|+|++|+++. ++ +.++++++.+++|||++||| |+++++++++..+||+|++||+++.||+|+.+
T Consensus 258 ~l~~~Gvd~i~v~~~~~-----~~---~~~~~ik~~~~iPvi~~Ggi-t~e~a~~~l~~G~aD~V~iGR~~ladPdl~~k 328 (361)
T 3gka_A 258 ELGRRRIAFLFARESFG-----GD---AIGQQLKAAFGGPFIVNENF-TLDSAQAALDAGQADAVAWGKLFIANPDLPRR 328 (361)
T ss_dssp HHHHTTCSEEEEECCCS-----TT---CCHHHHHHHHCSCEEEESSC-CHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred HHHHcCCCEEEECCCCC-----CH---HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHcCCccEEEECHHhHhCcHHHHH
Confidence 99999999999998861 22 45788899999999999999 99999999976669999999999999999987
No 20
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.97 E-value=4.7e-32 Score=277.59 Aligned_cols=241 Identities=12% Similarity=0.059 Sum_probs=186.3
Q ss_pred CCCCCceEEccccCCCCH-------HHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccC
Q 020428 1 MDYQNKLVLAPMVRVGTL-------PFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQ 73 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~-------~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (326)
++++||+++|||++.+.. .|+....+.|+|+++||+++++......+. ...+.++-......+.+.+..|+
T Consensus 23 ~~l~NRiv~apm~~~~~~~~~~~~~~~~~~~a~gG~gliite~~~v~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~vh~ 100 (690)
T 3k30_A 23 FTTKNRFYQVPHCNGMGYRDPSAQASMRKIKAEGGWSAVCTEQVEIHATSDIAPF--IELRIWDDQDLPALKRIADAIHE 100 (690)
T ss_dssp EECSSSEEECCCCCSCSSSCHHHHHHHHHHHHHTTCSEEEEEEEECSGGGCCTTS--CCEECSSGGGHHHHHHHHHHHHH
T ss_pred EEECCCeEeCCCcCCCCCCChHHHHHHHHHHhccCCEEEEecceEeccccccCCC--cCCccCCHHHHHHHHHHHHHHHh
Confidence 468999999999975432 245445566899999999998765432211 01111110000011224556677
Q ss_pred CCCcEEEEECCC--------------------------C---------------HHHHHHHHHHhhc-CCCEEEEccCCC
Q 020428 74 ERNHVVFQMGTS--------------------------D---------------AVRALTAAKMVCK-DVAAIDINMGCP 111 (326)
Q Consensus 74 ~~~p~~vQl~g~--------------------------~---------------~~~~~~aa~~~~~-~~d~idlN~gcP 111 (326)
.+.++++||++. . .++|++||+++.+ |||+||||++|+
T Consensus 101 ~g~~i~~Ql~h~Gr~~~~~~~~~~~~~ps~~~~~~~~~~~~~p~~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~g 180 (690)
T 3k30_A 101 GGGLAGIELAHNGMNAPNQLSRETPLGPGHLPVAPDTIAPIQARAMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHG 180 (690)
T ss_dssp TTCEEEEEEECCGGGCCCTTTCCCCEESSSCBSCSSCCCSCBCEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTT
T ss_pred cCCEEEEEccCCcccccccccCCCccCCCCCcccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccc
Confidence 888999999841 0 3789999999987 999999988855
Q ss_pred c----------cccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC------CCChHHHHHHHHHHHHcCCcE
Q 020428 112 K----------SFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL------LKSSQDTVELARRIEKTGVSA 173 (326)
Q Consensus 112 ~----------~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~------g~~~~~~~e~a~~l~~~G~d~ 173 (326)
+ .|.+.++||++++++++++.++++++++++ +.||.+|+.. |++.+++.++++.+++ |+|+
T Consensus 181 y~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~ 259 (690)
T 3k30_A 181 YSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDL 259 (690)
T ss_dssp CSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSE
T ss_pred chHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCE
Confidence 4 788999999999999999999999999999 5678888854 4667889999999998 8999
Q ss_pred EEEeeccc-----CCCC-CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 174 LAVHGRKV-----ADRP-RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 174 i~vh~r~~-----~~~~-~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
|+||+++. ...+ .....++.++++++.+++|||++|||+|+++++++++..+||+|++||+++.||||+.+
T Consensus 260 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~ 336 (690)
T 3k30_A 260 WDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNK 336 (690)
T ss_dssp EEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHH
T ss_pred EEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHH
Confidence 99998642 1122 22345788899999999999999999999999999976669999999999999999987
No 21
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=99.97 E-value=1.8e-31 Score=251.16 Aligned_cols=238 Identities=14% Similarity=0.097 Sum_probs=180.6
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccc-cccccc----ccccCcccccccCCccee--eecc-c
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLL-KCERRV----NEYIGSTDFVEKGTDSVV--FRTC-H 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~-~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~-~ 72 (326)
++++||+++|.=..-.+..+-..+...|+|.+.+..+..++-. ...+.. ...++...|-+...+.++ +... .
T Consensus 44 l~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~ 123 (354)
T 4ef8_A 44 NTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHD 123 (354)
T ss_dssp EEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCC
T ss_pred EECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccCCCCCcCHHHHHHHHHHHhh
Confidence 4689999998744435677777777889999988877766421 111111 011111111111111100 1111 1
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhh---c-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVC---K-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC 148 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~---~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v 148 (326)
..+.|+++||+|++++++.++++.+. + ++|+||||+|||+.+ + |..|+.+|+.+.++++++++.+++||+|
T Consensus 124 ~~~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~----g-g~~l~~~~e~~~~il~av~~~~~~PV~v 198 (354)
T 4ef8_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP----G-KPQVAYDFDAMRQCLTAVSEVYPHSFGV 198 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCST----T-SCCGGGSHHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCC----C-chhhccCHHHHHHHHHHHHHhhCCCeEE
Confidence 23469999999999999999999987 4 799999999999984 3 6788899999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcC-CcEEEEeecc------------cC-------CCCCC----cCCHHHHHHHHHhc-CC
Q 020428 149 KIRLLKSSQDTVELARRIEKTG-VSALAVHGRK------------VA-------DRPRD----PAKWGEIADIVAAL-SI 203 (326)
Q Consensus 149 K~r~g~~~~~~~e~a~~l~~~G-~d~i~vh~r~------------~~-------~~~~~----~~~~~~i~~i~~~~-~i 203 (326)
|+|.+++..+..++++.++++| +|+|++++.+ .. +.++| |.+|+.++++++.. ++
T Consensus 199 Ki~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~i 278 (354)
T 4ef8_A 199 KMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGK 278 (354)
T ss_dssp EECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTS
T ss_pred EecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCC
Confidence 9999998888889999999998 9999875432 11 12344 35799999999986 79
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC-cccccc
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN-ASIFSS 244 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~-P~lf~~ 244 (326)
|||++|||+|++|+.+++ ..|||+||+||+++.+ ||+|.+
T Consensus 279 pII~~GGI~s~~da~~~l-~aGAd~V~vgra~l~~GP~~~~~ 319 (354)
T 4ef8_A 279 LIFGCGGVYTGEDAFLHV-LAGASMVQVGTALQEEGPSIFER 319 (354)
T ss_dssp EEEEESCCCSHHHHHHHH-HHTEEEEEECHHHHHHCTTHHHH
T ss_pred CEEEECCcCCHHHHHHHH-HcCCCEEEEhHHHHHhCHHHHHH
Confidence 999999999999999999 5899999999999998 999886
No 22
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=99.97 E-value=2.9e-31 Score=249.74 Aligned_cols=234 Identities=17% Similarity=0.201 Sum_probs=177.6
Q ss_pred CCCCCceEEccccCCCC-HHHHHHHHHcCCCeEEeCceecccccc-ccccccc------ccCcccccccCCcceeeeccc
Q 020428 1 MDYQNKLVLAPMVRVGT-LPFRLLAAQYGADITYGEEIIDHKLLK-CERRVNE------YIGSTDFVEKGTDSVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~-~~fr~~~~~~G~~l~~te~i~~~~l~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 72 (326)
++++||+++|++ +++ ..++..+.+.|++++.|++++.++... ..+.... .++...+.+..... +.+..+
T Consensus 52 ~~l~npi~~aag--~~~~~~~~~~~a~~G~g~i~~~~~~~~~~~g~~~pr~~~~~~d~~~in~~g~~~~g~~~-~~~~~~ 128 (336)
T 1f76_A 52 LTFKNPLGLAAG--LDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFRLVDAEGLINRMGFNNLGVDN-LVENVK 128 (336)
T ss_dssp EEESSSEEECTT--SSTTCCCHHHHHHTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCCCBCCHHH-HHHHHH
T ss_pred EEcCCCcEeCcc--cCCcHHHHHHHHHcCccEEEeCCCCCCCCCCCCCcceeeccccceeeecCCCCCcCHHH-HHHHHH
Confidence 357999999965 443 347888889999999999998875321 0110000 00000011111011 111111
Q ss_pred C--CCCcEEEEECCCC-------HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-
Q 020428 73 Q--ERNHVVFQMGTSD-------AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL- 142 (326)
Q Consensus 73 ~--~~~p~~vQl~g~~-------~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~- 142 (326)
. .+.|+++||++++ ++++.++++++.+++|+|+||++||+.+ |...+.+++++.++++++++.+
T Consensus 129 ~~~~~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~g~d~iein~~sP~~~------g~~~~~~~~~~~~il~~vr~~~~ 202 (336)
T 1f76_A 129 KAHYDGVLGINIGKNKDTPVEQGKDDYLICMEKIYAYAGYIAINISSPNTP------GLRTLQYGEALDDLLTAIKNKQN 202 (336)
T ss_dssp HCCCCSEEEEEECCCTTSCGGGTHHHHHHHHHHHGGGCSEEEEECCCSSST------TGGGGGSHHHHHHHHHHHHHHHH
T ss_pred hcccCCcEEEEecCCCCCcccccHHHHHHHHHHHhccCCEEEEEccCCCCC------CcccccCHHHHHHHHHHHHHHHH
Confidence 1 2358999999988 8999999999877999999999999864 3445778999999999999988
Q ss_pred --------cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCC-------------CCCCcC----CHHHHHHH
Q 020428 143 --------DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVAD-------------RPRDPA----KWGEIADI 197 (326)
Q Consensus 143 --------~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~-------------~~~~~~----~~~~i~~i 197 (326)
++||++|++.+++.++..++++.++++|+|+|++|+++... .+++++ .++.++++
T Consensus 203 ~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i 282 (336)
T 1f76_A 203 DLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRL 282 (336)
T ss_dssp HHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHH
T ss_pred hhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHH
Confidence 89999999988888899999999999999999999876321 122332 35788899
Q ss_pred HHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc-Ccccccc
Q 020428 198 VAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW-NASIFSS 244 (326)
Q Consensus 198 ~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~-~P~lf~~ 244 (326)
++.+ ++|||++|||+|++|+.++++ .|||+||+||+++. |||+|.+
T Consensus 283 ~~~~~~~ipVi~~GGI~~~~da~~~l~-~GAd~V~igr~~l~~~P~~~~~ 331 (336)
T 1f76_A 283 SLELNGRLPIIGVGGIDSVIAAREKIA-AGASLVQIYSGFIFKGPPLIKE 331 (336)
T ss_dssp HHHHTTSSCEEEESSCCSHHHHHHHHH-HTCSEEEESHHHHHHCHHHHHH
T ss_pred HHHhCCCCCEEEECCCCCHHHHHHHHH-CCCCEEEeeHHHHhcCcHHHHH
Confidence 9988 899999999999999999994 89999999999998 9999976
No 23
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=99.97 E-value=1e-30 Score=247.71 Aligned_cols=236 Identities=18% Similarity=0.176 Sum_probs=174.7
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccc-ccccccc------cccCcccccccCCcce---eeec
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLL-KCERRVN------EYIGSTDFVEKGTDSV---VFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~-~~~~~~~------~~~~~~~~~~~~~~~~---~~~~ 70 (326)
++++||+++|.=..-....++.+.. .|.|.+.+..++.++-. ...+... ..++..-|-+...... +...
T Consensus 57 l~~~NPvglAaG~~~~~~~~~~~~~-~g~G~v~~ktvt~~pq~GNp~PR~~~~~~~~~~iN~~G~~N~G~~~~~~~l~~~ 135 (367)
T 3zwt_A 57 HKFRNPVGIAAGFDKHGEAVDGLYK-MGFGFVEIGSVTPKPQEGNPRPRVFRLPEDQAVINRYGFNSHGLSVVEHRLRAR 135 (367)
T ss_dssp EEESSSEEECTTSSTTSSSHHHHHH-TTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCCCBCCHHHHHHHHHTT
T ss_pred EEcCCCCEeCCCcCCCHHHHHHHHh-cCcCeEEeCCccCCCCCCCCCCeEEEecCccceeeccCCCCccHHHHHHHHHHH
Confidence 3689999999422212234555554 59999999988876422 1111110 0111111111110000 0000
Q ss_pred ------ccCCCCcEEEEECCC-----CHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHh
Q 020428 71 ------CHQERNHVVFQMGTS-----DAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLK 139 (326)
Q Consensus 71 ------~~~~~~p~~vQl~g~-----~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~ 139 (326)
.+..+.|+++||+|+ +++++.++++.+.+++|+||||+|||+.+ |..++.+++.+.+++++++
T Consensus 136 ~~~~~~~~~~~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~------G~~~l~~~~~l~~ll~av~ 209 (367)
T 3zwt_A 136 QQKQAKLTEDGLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTA------GLRSLQGKAELRRLLTKVL 209 (367)
T ss_dssp HHHHHHHHHTTCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHHHH
T ss_pred hhhccccccCCceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCC------CccccCCHHHHHHHHHHHH
Confidence 001246999999997 68999999999988899999999999984 4457899999999999997
Q ss_pred hc-------ccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC-------------CCCCCcC----CHHHHH
Q 020428 140 RN-------LDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA-------------DRPRDPA----KWGEIA 195 (326)
Q Consensus 140 ~~-------~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~-------------~~~~~~~----~~~~i~ 195 (326)
+. +++||+||++.+++.++..++|+.++++|+|+|++|+++.. +.++|++ .++.++
T Consensus 210 ~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~ 289 (367)
T 3zwt_A 210 QERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIR 289 (367)
T ss_dssp HHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHH
T ss_pred HHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHH
Confidence 64 68999999999998889999999999999999999998743 1233443 358899
Q ss_pred HHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh-cCcccccc
Q 020428 196 DIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL-WNASIFSS 244 (326)
Q Consensus 196 ~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l-~~P~lf~~ 244 (326)
++++.+ ++|||++|||.|++|+.+++ ..|||+||+||+++ .+||+|.+
T Consensus 290 ~i~~~v~~~ipvI~~GGI~s~~da~~~l-~~GAd~V~vgra~l~~gP~~~~~ 340 (367)
T 3zwt_A 290 EMYALTQGRVPIIGVGGVSSGQDALEKI-RAGASLVQLYTALTFWGPPVVGK 340 (367)
T ss_dssp HHHHHTTTCSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHHCTHHHHH
T ss_pred HHHHHcCCCceEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHhcCcHHHHH
Confidence 999999 89999999999999999999 58999999999995 58999876
No 24
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=99.97 E-value=9.1e-31 Score=245.81 Aligned_cols=235 Identities=17% Similarity=0.111 Sum_probs=172.8
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccc-ccccccc----cccCcccccccCCcce---eeecc-
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLL-KCERRVN----EYIGSTDFVEKGTDSV---VFRTC- 71 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~-~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~- 71 (326)
++++||+++|.=..-.+..+...+...|+|.+.+..++.++-. ...+... ..++...|-+...+.+ +....
T Consensus 45 l~~~NPv~lAaG~~~~~~e~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n~G~~~~~~~l~~~~~ 124 (345)
T 3oix_A 45 FDFDNCLMNAAGVYCMTREELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPNLGINYYLDYVTELQK 124 (345)
T ss_dssp EEESCSEEECTTSSCSSHHHHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCBSCHHHHHHHHHHHHH
T ss_pred EECCCCCEEcCCCCCCCHHHHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCChhHHHHHHHHHHHhh
Confidence 4689999999422224668888888899999999998876421 1111110 1111111111111110 11111
Q ss_pred cCCCCcEEEEECCCCHHHHHHHHHHhhc-CCC-EEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEE
Q 020428 72 HQERNHVVFQMGTSDAVRALTAAKMVCK-DVA-AIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCK 149 (326)
Q Consensus 72 ~~~~~p~~vQl~g~~~~~~~~aa~~~~~-~~d-~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK 149 (326)
...+.|+++||+|++++++.++++.+++ +++ +||||+|||+.+ .|..++.+|+.+.++++++++.+++||+||
T Consensus 125 ~~~~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~-----G~~~l~~~~e~l~~il~av~~~~~~PV~vK 199 (345)
T 3oix_A 125 QPDSKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVP-----GXPQIAYDFETTDQILSEVFTYFTKPLGIK 199 (345)
T ss_dssp STTCCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCST-----TCCCGGGCHHHHHHHHHHHTTTCCSCEEEE
T ss_pred ccCCCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcC-----CchhhcCCHHHHHHHHHHHHHHhCCCeEEE
Confidence 2235699999999999999999999976 776 999999999985 257888999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCcEEE-------------EeecccC-------CCCCCcCC----HHHHHHHHHhc--CC
Q 020428 150 IRLLKSSQDTVELARRIEKTGVSALA-------------VHGRKVA-------DRPRDPAK----WGEIADIVAAL--SI 203 (326)
Q Consensus 150 ~r~g~~~~~~~e~a~~l~~~G~d~i~-------------vh~r~~~-------~~~~~~~~----~~~i~~i~~~~--~i 203 (326)
+|.+.+ ..++++.++++|++.|+ +|.|+.. +.++|++. |+.++++++.+ ++
T Consensus 200 i~p~~~---~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~i 276 (345)
T 3oix_A 200 LPPYFD---IVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSI 276 (345)
T ss_dssp ECCCCC---HHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTS
T ss_pred ECCCCC---HHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCC
Confidence 998754 45666777776666553 4444321 23455655 78899999998 79
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEeccc-hhcCcccccc
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMAARG-ALWNASIFSS 244 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~-~l~~P~lf~~ 244 (326)
|||++|||.|++|+.+++ ..|||+|||||+ ++.+||+|.+
T Consensus 277 pIIg~GGI~s~~da~~~l-~aGAd~V~igra~~~~gP~~~~~ 317 (345)
T 3oix_A 277 QIIGTGGVXTGRDAFEHI-LCGASMVQIGTALHQEGPQIFKR 317 (345)
T ss_dssp EEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHHHCTHHHHH
T ss_pred cEEEECCCCChHHHHHHH-HhCCCEEEEChHHHhcChHHHHH
Confidence 999999999999999999 589999999999 7889999876
No 25
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=99.97 E-value=2.6e-30 Score=246.18 Aligned_cols=236 Identities=14% Similarity=0.114 Sum_probs=176.8
Q ss_pred CCCCCceEEccccCCC----------CHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeec
Q 020428 1 MDYQNKLVLAPMVRVG----------TLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~t----------~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (326)
++++|||++|||.... +........+.|+||++||.+.++.-....+ ...+.++-......+.+.+.
T Consensus 16 ~~l~NRiv~apm~~~~a~~~~g~pt~~~~~~yY~~rA~~GLIite~~~v~~~g~~~~---~~~gi~~d~~i~~~k~~~~a 92 (379)
T 3aty_A 16 YTLRNRIIMAPLTRCQATEDDHVPRTESMLKYYEDRASAGLIIAEATMVQPNYTGFL---TEPGIYSDAQIEEWRKIVDA 92 (379)
T ss_dssp EEESCSEEECCCCCCCBCTTTCCBCHHHHHHHHHTTTTSSEEEEEEEESSTTCCSSS---SCCBSSSHHHHHHHHHHHHH
T ss_pred EEEcCccEECCcCCCcccCCCCccCHHHHHHHHHHHhCCCeEEECceecccccccCC---CCCCcCCHHHHHHHHHHHHH
Confidence 4689999999998532 3334455555689999999887664322111 11222110000011223445
Q ss_pred ccCCCCcEEEEECC----------------------------------------------------------------CC
Q 020428 71 CHQERNHVVFQMGT----------------------------------------------------------------SD 86 (326)
Q Consensus 71 ~~~~~~p~~vQl~g----------------------------------------------------------------~~ 86 (326)
+|+.+.++++||++ ..
T Consensus 93 vh~~G~~i~~QL~H~Gr~~~~~~~~~~~~~g~~~~~~~~~apS~i~~~~~~~~~~~~~~g~~~~~~~pr~lt~~eI~~~~ 172 (379)
T 3aty_A 93 VHKKGGLIFLQLIHAGRAGIPEKILQQSKSDQDPLAGRLLAASAIPIKDHRIPAYFAASGEKETYGVPEELTDDEVRDGI 172 (379)
T ss_dssp HHHTTCCEEEEEECCGGGSCHHHHTTSCCCSSSTTTTCCEESSSCCCCSCCBCTTTSTTSSCBCCCCCEECCHHHHHHTH
T ss_pred HHhcCCEEEEEeccCCcccCcccccccccCCCCCccCcccCCCCCccccccccccccccccccCCCCCccCCHHHHhHHH
Confidence 55566666666631 11
Q ss_pred HHHHHHHHHHhh-c-CCCEEEEccCC---------Cccccc-cccccc-cccCChHHHHHHHHHHhhccc-CcEEEEecC
Q 020428 87 AVRALTAAKMVC-K-DVAAIDINMGC---------PKSFSV-SGGMGA-ALLSKPELIHDILTMLKRNLD-VPVTCKIRL 152 (326)
Q Consensus 87 ~~~~~~aa~~~~-~-~~d~idlN~gc---------P~~~~~-~~~~G~-~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~ 152 (326)
.++|+++|+++. + |||+||||++| |..+.+ .++||+ +++++++++.+++++|+++++ .||.+|++.
T Consensus 173 i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~~v~vRis~ 252 (379)
T 3aty_A 173 IPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSDRVGLRISP 252 (379)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCCeEEEEECc
Confidence 346778999988 7 99999999996 888888 999999 999999999999999999985 489999998
Q ss_pred C---------CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHh
Q 020428 153 L---------KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTA 223 (326)
Q Consensus 153 g---------~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~ 223 (326)
. ++.+++.++++.++++|+|+|++|+++.... .. ..+ ++++++.+++|||++||| |+++++++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~--~~-~~~-~~~ir~~~~iPvi~~G~i-t~~~a~~~l~~ 327 (379)
T 3aty_A 253 LNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQ--QI-GDV-VAWVRGSYSGVKISNLRY-DFEEADQQIRE 327 (379)
T ss_dssp TCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSC--CC-CCH-HHHHHTTCCSCEEEESSC-CHHHHHHHHHT
T ss_pred ccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCC--Cc-cHH-HHHHHHHCCCcEEEECCC-CHHHHHHHHHc
Confidence 3 2356789999999999999999998753221 11 236 889999999999999999 99999999976
Q ss_pred cCCcEEEeccchhcCcccccc
Q 020428 224 AGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 224 ~Gad~VmiGr~~l~~P~lf~~ 244 (326)
.+||+|++||+++.||+|+.+
T Consensus 328 g~aD~V~igR~~l~~P~l~~k 348 (379)
T 3aty_A 328 GKVDAVAFGAKFIANPDLVER 348 (379)
T ss_dssp TSCSEEEESHHHHHCTTHHHH
T ss_pred CCCeEEEecHHHHhCcHHHHH
Confidence 669999999999999999987
No 26
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=99.97 E-value=1.3e-29 Score=244.77 Aligned_cols=235 Identities=17% Similarity=0.165 Sum_probs=179.4
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceecccccc-cccccc------cccCcccccccCCcceeeeccc-
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLLK-CERRVN------EYIGSTDFVEKGTDSVVFRTCH- 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 72 (326)
++++||+++|++..-....++.+ .+.|+|++.++++++++-.. ..+... ..++...|-+...+. +.+..+
T Consensus 89 l~~~NPvglAAG~dk~~~~~~~l-~~~GfG~v~~gtvT~~pq~GNp~PR~~rl~e~~~iiN~~GfnN~G~~~-~~~~l~~ 166 (443)
T 1tv5_A 89 LDFINPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDK-VTENLIL 166 (443)
T ss_dssp EEESSSEEECTTTTTTCSSHHHH-HTTTCSEEEEEEECSSCBCCSCSCCEEEETTTTEEEECCCSCBSCHHH-HHHHHHH
T ss_pred EEeCCCcEECCcccCccHHHHHH-HhcCCCEEEEeeeecCCCCCCCCccEEeccccceeeeccccCChhHHH-HHHHHHH
Confidence 46899999998775444566664 66799999999999865321 111110 001111111111011 000000
Q ss_pred ---C-------CCCcEEEEECCCC-----HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHH
Q 020428 73 ---Q-------ERNHVVFQMGTSD-----AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTM 137 (326)
Q Consensus 73 ---~-------~~~p~~vQl~g~~-----~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~ 137 (326)
. ...|+++||++++ ++++.++++.+.+++|+||||++||+.+ |...+++++.+.+++++
T Consensus 167 ~~~~~~~~~~~~~~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~------Glr~lq~~~~l~~il~~ 240 (443)
T 1tv5_A 167 FRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILS 240 (443)
T ss_dssp HHHHHHHCSTTTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST------TGGGGGSHHHHHHHHHH
T ss_pred HhhhcccccccCCceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc------ccccccCHHHHHHHHHH
Confidence 0 1348999999998 8999999999988999999999999974 68889999999999999
Q ss_pred Hhhc--------------------------------------------------ccCc-EEEEecCCCChHHHHHHHHHH
Q 020428 138 LKRN--------------------------------------------------LDVP-VTCKIRLLKSSQDTVELARRI 166 (326)
Q Consensus 138 v~~~--------------------------------------------------~~~p-v~vK~r~g~~~~~~~e~a~~l 166 (326)
++++ .++| |+||++.+++.++..++|+.+
T Consensus 241 v~~~~~~~~~~~~~~~g~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~vKispd~~~ed~~~iA~~~ 320 (443)
T 1tv5_A 241 VKEEIDNLEKNNIMNDESTYNEDNKIVEKKNNFNKNNSHMMKDAKDNFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVL 320 (443)
T ss_dssp HHHHHHHHC--------------------------------------CCCCSSSSSCCEEEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHhhhcccCccccccCHHHHHHHHHHhhcccccchhhhhhhhhcchhcccCCCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 9864 3678 999999988888999999999
Q ss_pred HHcCCcEEEEeecccCC-----------CCCCcC----CHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEE
Q 020428 167 EKTGVSALAVHGRKVAD-----------RPRDPA----KWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSV 229 (326)
Q Consensus 167 ~~~G~d~i~vh~r~~~~-----------~~~~~~----~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~V 229 (326)
+++|+|+|++|+++... .++|++ .++.++++++.+ ++|||++|||.|++|+.+++ ..|||+|
T Consensus 321 ~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~l-~aGAd~V 399 (443)
T 1tv5_A 321 LETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI-EAGASVC 399 (443)
T ss_dssp HHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHHH-HTTEEEE
T ss_pred HHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHHH-HcCCCEE
Confidence 99999999999997632 222332 367899999998 89999999999999999999 5899999
Q ss_pred Eeccchhc-Ccccccc
Q 020428 230 MAARGALW-NASIFSS 244 (326)
Q Consensus 230 miGr~~l~-~P~lf~~ 244 (326)
|+||+++. +||++.+
T Consensus 400 qigrall~~gP~l~~~ 415 (443)
T 1tv5_A 400 QLYSCLVFNGMKSAVQ 415 (443)
T ss_dssp EESHHHHHHGGGHHHH
T ss_pred EEcHHHHhcChHHHHH
Confidence 99999886 9998876
No 27
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=99.96 E-value=1.8e-29 Score=240.78 Aligned_cols=236 Identities=17% Similarity=0.177 Sum_probs=169.6
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccc-ccccccc------cccCcccccccCCcce---eeec
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLL-KCERRVN------EYIGSTDFVEKGTDSV---VFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~-~~~~~~~------~~~~~~~~~~~~~~~~---~~~~ 70 (326)
++++||+++|.=..-....++.+ .+.|+|.+.+..+.+++-. ...+..- ..++..-|-+...... +...
T Consensus 91 l~f~NPvglAAG~dk~~~~~~~l-~~lGfG~vevgtvT~~pq~GNp~PRlfrl~e~~aiiN~~GfnN~G~d~~~~~l~~~ 169 (415)
T 3i65_A 91 LDFINPFGVAAGFDKNGVCIDSI-LKLGFSFIEIGTITPRGQTGNAKPRIFRDVESRSIINSCGFNNMGCDKVTENLILF 169 (415)
T ss_dssp EEESSSEEECTTSSTTCSSHHHH-HTTTCSEEEEEEECSSCBCCSCSCCEEEEGGGTEEEECCCSCBCCHHHHHHHHHHH
T ss_pred EECCCCCEECCCCCCCHHHHHHH-HHcCCCeEEeCcccCCcCCCCCCCeEEeccCCCceeecCCCCchhHHHHHHHHHHH
Confidence 46899999986332222234433 3679999988888766421 1111110 0111111211111110 0000
Q ss_pred ccC-------CCCcEEEEECCCC-----HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHH
Q 020428 71 CHQ-------ERNHVVFQMGTSD-----AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTML 138 (326)
Q Consensus 71 ~~~-------~~~p~~vQl~g~~-----~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v 138 (326)
... ...|+++||++++ ++++.++++.+.+.+|.||||++||+.+ |..++++++.+.++++++
T Consensus 170 ~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~------Gl~~lq~~~~l~~ll~aV 243 (415)
T 3i65_A 170 RKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP------GLRDNQEAGKLKNIILSV 243 (415)
T ss_dssp HHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------------CCHHHHHHHHHH
T ss_pred HhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCC------CcccccCHHHHHHHHHHH
Confidence 000 1347999999998 8999999999987899999999999984 678999999999999999
Q ss_pred hhc--------------------ccCc-EEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC-----------CCCC
Q 020428 139 KRN--------------------LDVP-VTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA-----------DRPR 186 (326)
Q Consensus 139 ~~~--------------------~~~p-v~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~-----------~~~~ 186 (326)
++. ..+| |+||++.+++.++..++|+.++++|+|+|++|+++.. +.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlS 323 (415)
T 3i65_A 244 KEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVS 323 (415)
T ss_dssp HHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEE
T ss_pred HHHHHhhcccccccccccccccCCCCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcC
Confidence 875 2689 9999999998889999999999999999999998863 2344
Q ss_pred CcCCH----HHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC-cccccc
Q 020428 187 DPAKW----GEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN-ASIFSS 244 (326)
Q Consensus 187 ~~~~~----~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~-P~lf~~ 244 (326)
|++.| +.++++++.+ ++|||++|||+|++|+.+++ ..|||+|||||+++.+ ||++.+
T Consensus 324 G~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~l-~aGAd~VqIgra~l~~GP~~~~~ 387 (415)
T 3i65_A 324 GAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEKI-EAGASVCQLYSCLVFNGMKSAVQ 387 (415)
T ss_dssp EGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHHH-HHTEEEEEESHHHHHHGGGHHHH
T ss_pred CccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHHhcCHHHHHH
Confidence 55555 7899999998 79999999999999999999 5899999999999986 998876
No 28
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=99.96 E-value=1.4e-30 Score=248.55 Aligned_cols=242 Identities=13% Similarity=0.079 Sum_probs=181.8
Q ss_pred CCCCCceEEccccCC--------CCHHHHHHHHHc--CCCeEEeCceecccccccccccccccCcccccccCCcceeeec
Q 020428 1 MDYQNKLVLAPMVRV--------GTLPFRLLAAQY--GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRT 70 (326)
Q Consensus 1 l~l~~~iilAPM~g~--------t~~~fr~~~~~~--G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (326)
++++|||++|||... |+........+. |+|+++||.+.++.-....+. ...+.++-......+.+.+.
T Consensus 23 ~~LkNRiv~aPm~~~~a~~~g~pt~~~~~yY~~rA~gG~GLIIte~~~V~~~g~~~~~--~~~gi~~d~~i~~~k~l~~a 100 (407)
T 3tjl_A 23 NTLQTKIVYPPTTRFRALEDHTPSDLQLQYYGDRSTFPGTLLITEATFVSPQASGYEG--AAPGIWTDKHAKAWKVITDK 100 (407)
T ss_dssp EEESCSEEBCCCCCCBSCTTSCCBHHHHHHHHHTCCSTTCEEEEEEEESSGGGCCCSS--BCCBCSSHHHHHHHHHHHHH
T ss_pred EEecCCcEECCCCCCccCCCCCCCHHHHHHHHHHHcCCceEEEEcceEECCccCCCCC--cCcccCCHHHHHHHHHHHHH
Confidence 468999999999863 234444555554 589999998877654322111 01222211000112224667
Q ss_pred ccCCCCcEEEEECCC----C---------------------------------------------HHH-HHHHHHHhhc-
Q 020428 71 CHQERNHVVFQMGTS----D---------------------------------------------AVR-ALTAAKMVCK- 99 (326)
Q Consensus 71 ~~~~~~p~~vQl~g~----~---------------------------------------------~~~-~~~aa~~~~~- 99 (326)
+|+.+.++++||++. . .++ |++||+++.+
T Consensus 101 vH~~G~~i~~QL~H~Gr~~~~~~~~~~g~~~vapS~i~~~~~~~~~~~~~~~~pr~lt~~eI~~ii~~~~~~aa~~a~~a 180 (407)
T 3tjl_A 101 VHANGSFVSTQLIFLGRVADPAVMKTRGLNPVSASATYESDAAKEAAEAVGNPVRALTTQEVKDLVYEAYTNAAQKAMDA 180 (407)
T ss_dssp HHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESSSCCSSHHHHHHHHHTTCCCEECCHHHHHHHHHTHHHHHHHHHHHT
T ss_pred HHhcCCEEEEEeccCCCccchhhcccCCCcccCCCCcccccccccccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 788888999999631 0 135 8999999887
Q ss_pred CCCEEEEccCC---------CccccccccccccccCChHHHHHHHHHHhhccc-CcEEEEecCCC---------C----h
Q 020428 100 DVAAIDINMGC---------PKSFSVSGGMGAALLSKPELIHDILTMLKRNLD-VPVTCKIRLLK---------S----S 156 (326)
Q Consensus 100 ~~d~idlN~gc---------P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~g~---------~----~ 156 (326)
|||+||||++| |..|.+.++||++++++++++.+|+++|+++++ .||++|++... + .
T Consensus 181 Gfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~~~~~~~g~~~~~d~~~~~ 260 (407)
T 3tjl_A 181 GFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRISPWATFQNMKAHKDTVHPL 260 (407)
T ss_dssp TCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCGGGCCGGGSSSCHH
T ss_pred CCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEECcccccCCCcccccccccH
Confidence 99999999999 999999999999999999999999999999985 48999999721 2 3
Q ss_pred HHHHHHHHHH---HHcC--CcEEEEe-ecccCCCCCCcC-CHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHh---cCC
Q 020428 157 QDTVELARRI---EKTG--VSALAVH-GRKVADRPRDPA-KWGEIADIVAALSIPVIANGDVFEYDDFQRIKTA---AGA 226 (326)
Q Consensus 157 ~~~~e~a~~l---~~~G--~d~i~vh-~r~~~~~~~~~~-~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~---~Ga 226 (326)
+++.++++.| ++.| +++|+|| +|+..+.+..+. .|+.+..+++.+++|||+||||++.+|+.++++. .+|
T Consensus 261 ~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~~~PvI~~Ggi~~~~dA~~~i~~~~~g~a 340 (407)
T 3tjl_A 261 TTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNYSYDAPEFKTLKEDIADKR 340 (407)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHCCSEEEEESCGGGGTTTTHHHHHHHTTSS
T ss_pred HHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHhCCCEEecCCCCCHHHHHHHHHhhccCCC
Confidence 4578899999 8889 9999998 665543322221 3455677888889999999999999988877765 779
Q ss_pred cEEEeccchhcCcccccc
Q 020428 227 SSVMAARGALWNASIFSS 244 (326)
Q Consensus 227 d~VmiGr~~l~~P~lf~~ 244 (326)
|+|++||+++.||+|+.+
T Consensus 341 DlVa~GR~~iaNPdL~~r 358 (407)
T 3tjl_A 341 TLVGFSRYFTSNPNLVWK 358 (407)
T ss_dssp EEEECSHHHHHCTTHHHH
T ss_pred eEEEeChhhhhCchHHHH
Confidence 999999999999999986
No 29
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=99.96 E-value=1.3e-29 Score=235.65 Aligned_cols=236 Identities=18% Similarity=0.265 Sum_probs=171.9
Q ss_pred CCCCCceEEcc-ccCCCCHHHHHHHHHcCCCeEEeCceecccccccc-cccc----cccCcccccccCCcce---eeecc
Q 020428 1 MDYQNKLVLAP-MVRVGTLPFRLLAAQYGADITYGEEIIDHKLLKCE-RRVN----EYIGSTDFVEKGTDSV---VFRTC 71 (326)
Q Consensus 1 l~l~~~iilAP-M~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~-~~~~----~~~~~~~~~~~~~~~~---~~~~~ 71 (326)
++++||+++|| |.+.++ .++..+...|+|++.|+-+..++..... +... ..++...+.+...... .++..
T Consensus 14 ~~l~npi~~aag~~~~~~-~~~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 92 (311)
T 1ep3_A 14 LDLKNPIIPASGCFGFGE-EYAKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIGLQNPGLEVIMTEKLPWL 92 (311)
T ss_dssp EEESSSEEECTTSSTTST-TGGGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCCCCBCCHHHHHHTHHHHH
T ss_pred EECCCCcEECCCCCCCCH-HHHHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccCCCCcCHHHHHHHHHHHH
Confidence 36899999999 888775 4665555567888877766544331110 0000 0001110110000010 11111
Q ss_pred c--CCCCcEEEEECCCCHHHHHHHHHHhh--cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEE
Q 020428 72 H--QERNHVVFQMGTSDAVRALTAAKMVC--KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVT 147 (326)
Q Consensus 72 ~--~~~~p~~vQl~g~~~~~~~~aa~~~~--~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~ 147 (326)
+ ..+.|+++||++++++++.++++.+. .|+|+||||++||+.+. .|..+..+++++.++++++++.+++||+
T Consensus 93 ~~~~~~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~----g~~~~g~~~~~~~eii~~v~~~~~~pv~ 168 (311)
T 1ep3_A 93 NENFPELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKH----GGQAFGTDPEVAAALVKACKAVSKVPLY 168 (311)
T ss_dssp HHHCTTSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGG----TTEEGGGCHHHHHHHHHHHHHHCSSCEE
T ss_pred HhcCCCCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCC----chhhhcCCHHHHHHHHHHHHHhcCCCEE
Confidence 2 22569999999999999999999998 58999999999998642 2556667999999999999999899999
Q ss_pred EEecCCCChHHHHHHHHHHHHcCCcEEEEee---------cccC-------CCCCCcCC----HHHHHHHHHhcCCcEEE
Q 020428 148 CKIRLLKSSQDTVELARRIEKTGVSALAVHG---------RKVA-------DRPRDPAK----WGEIADIVAALSIPVIA 207 (326)
Q Consensus 148 vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~---------r~~~-------~~~~~~~~----~~~i~~i~~~~~iPVi~ 207 (326)
+|++.+++ +..++++.++++|+|+|++++ ++.. +.++++.. ++.++++++.+++|||+
T Consensus 169 vk~~~~~~--~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia 246 (311)
T 1ep3_A 169 VKLSPNVT--DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIG 246 (311)
T ss_dssp EEECSCSS--CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEE
T ss_pred EEECCChH--HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEE
Confidence 99997653 457889999999999999943 3331 12345544 47888999989999999
Q ss_pred eCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 208 NGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 208 nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
+|||.|++|+.+++ ..|||+|++||+++.+|+++.+
T Consensus 247 ~GGI~~~~d~~~~l-~~GAd~V~vg~~~l~~p~~~~~ 282 (311)
T 1ep3_A 247 MGGVANAQDVLEMY-MAGASAVAVGTANFADPFVCPK 282 (311)
T ss_dssp CSSCCSHHHHHHHH-HHTCSEEEECTHHHHCTTHHHH
T ss_pred ECCcCCHHHHHHHH-HcCCCEEEECHHHHcCcHHHHH
Confidence 99999999999999 5899999999999999998765
No 30
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.95 E-value=2.1e-27 Score=252.42 Aligned_cols=238 Identities=18% Similarity=0.236 Sum_probs=178.9
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceeccccc--ccccccccc--------cCcccccccC-----Ccce
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLL--KCERRVNEY--------IGSTDFVEKG-----TDSV 66 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~--~~~~~~~~~--------~~~~~~~~~~-----~~~~ 66 (326)
+++||+++|||...++.+++..+...|.+++.++.++.+.-. ...+..-.. .+...|++.. ....
T Consensus 541 ~~~nPv~lAa~~~~~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~~~~~~~~n~e~~~~~~~~~ 620 (1025)
T 1gte_A 541 KFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAY 620 (1025)
T ss_dssp EESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCSSCCSCEEECCCSCSSCHHH
T ss_pred cccCcccccCCCCCCCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccCCchhheeeeccccchhHHH
Confidence 578999999999989999999999999999998877754311 111110000 0000011110 0000
Q ss_pred ----eeeccc-CCCCcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHh
Q 020428 67 ----VFRTCH-QERNHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLK 139 (326)
Q Consensus 67 ----~~~~~~-~~~~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~ 139 (326)
+.+... ..+.|+++|+ +|++++++.++++++.+ |+|+|+||++||+. ...+++|++++++++++.+++++++
T Consensus 621 ~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~G~~~~~~~~~~~~iv~~v~ 699 (1025)
T 1gte_A 621 WCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGMGLACGQDPELVRNICRWVR 699 (1025)
T ss_dssp HHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC-----SBGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCcccccccCHHHHHHHHHHHH
Confidence 000011 1235899988 68899999999999976 99999999999998 6678899999999999999999999
Q ss_pred hcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEE----------------------eecccCCCCCCcCCH----HH
Q 020428 140 RNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAV----------------------HGRKVADRPRDPAKW----GE 193 (326)
Q Consensus 140 ~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~v----------------------h~r~~~~~~~~~~~~----~~ 193 (326)
+.+++||++|++.+. .+..++++.++++|+|+|++ |+|+..+.+++++.| +.
T Consensus 700 ~~~~~Pv~vK~~~~~--~~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~ 777 (1025)
T 1gte_A 700 QAVQIPFFAKLTPNV--TDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRA 777 (1025)
T ss_dssp HHCSSCEEEEECSCS--SCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHH
T ss_pred HhhCCceEEEeCCCh--HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHH
Confidence 999999999998643 36788999999999999999 566655666677775 68
Q ss_pred HHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc-ccc
Q 020428 194 IADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS-IFS 243 (326)
Q Consensus 194 i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~-lf~ 243 (326)
+.++++.+ ++|||++|||+|++|+.+++ ..|||+|||||+++.+|+ ++.
T Consensus 778 v~~v~~~~~~ipvi~~GGI~s~~da~~~l-~~Ga~~v~vg~~~l~~~~~~~~ 828 (1025)
T 1gte_A 778 VTTIARALPGFPILATGGIDSAESGLQFL-HSGASVLQVCSAVQNQDFTVIQ 828 (1025)
T ss_dssp HHHHHHHSTTCCEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHTSCTTHHH
T ss_pred HHHHHHHcCCCCEEEecCcCCHHHHHHHH-HcCCCEEEEeeccccCCccHHH
Confidence 89999998 99999999999999999999 599999999999998444 443
No 31
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=99.94 E-value=1.6e-26 Score=218.95 Aligned_cols=240 Identities=12% Similarity=0.072 Sum_probs=179.4
Q ss_pred CCCCCceEEccccCC--------CCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeeccc
Q 020428 1 MDYQNKLVLAPMVRV--------GTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~--------t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (326)
++++|||++|||... |+.......++.++|+++||.+.++.-....+ ...+.++-......+.+.+.+|
T Consensus 13 ~~lkNRiv~apm~~~~a~~dg~~t~~~~~~y~~rA~gGliite~~~V~~~g~~~~---~~~gi~~d~~i~~~k~l~~avh 89 (358)
T 4a3u_A 13 FTAKNRIWMAPLTRGRATRDHVPTEIMAEYYAQRASAGLIISEATGISQEGLGWP---YAPGIWSDAQVEAWLPITQAVH 89 (358)
T ss_dssp EEESCSEEECCCCCCCSCTTCCCCHHHHHHHHHTTTSSSEEEEEEESSTTTCCST---TCCBCSSHHHHHHHHHHHHHHH
T ss_pred EEECCceEEcccCCCccCCCCCCCHHHHHHHHHHcCCCEEEEeeeEECccccCCC---CCcccCchHhHHHHHHHHHHHH
Confidence 468999999999853 34555566666678999999887665332221 1222222100011222466678
Q ss_pred CCCCcEEEEECCCC-----------------------------------------------HHHHHHHHHHhhc-CCCEE
Q 020428 73 QERNHVVFQMGTSD-----------------------------------------------AVRALTAAKMVCK-DVAAI 104 (326)
Q Consensus 73 ~~~~p~~vQl~g~~-----------------------------------------------~~~~~~aa~~~~~-~~d~i 104 (326)
+.+.++++||++.. .++|++||+++.+ |||+|
T Consensus 90 ~~G~~i~~QL~H~Gr~~~~~~~g~~~~apS~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~~AGFDgV 169 (358)
T 4a3u_A 90 DAGGLIFAQLWHMGRMVPSNVSGMQPVAPSASQAPGLGHTYDGKKPYDVARALRLDEIPRLLDDYEKAARHALKAGFDGV 169 (358)
T ss_dssp HTTCCEEEEEECCGGGCCHHHHSSCCEESSCEECSSEEECSSSEEECCEEEECCGGGHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred hcCCceeeccccccccccccccccCCCCCcccccCCcccccCCCCCCccCccCCHHHHHHHHHHHHHHHHHHHHcCCCeE
Confidence 88889999995311 2579999999987 99999
Q ss_pred EEccC---------CCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCC---------CChHHHHHHHHH
Q 020428 105 DINMG---------CPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLL---------KSSQDTVELARR 165 (326)
Q Consensus 105 dlN~g---------cP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g---------~~~~~~~e~a~~ 165 (326)
|||++ +|..|.|+++||+++.++.+++.||+++||+++ .-+|.+|+... .+.+....+++.
T Consensus 170 EIH~ahGYLl~QFLSp~tN~RtDeYGGS~eNR~Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~~~~~~~~~~~~~~ 249 (358)
T 4a3u_A 170 QIHAANGYLIDEFIRDSTNHRHDEYGGAVENRIRLLKDVTERVIATIGKERTAVRLSPNGEIQGTVDSHPEQVFIPAAKM 249 (358)
T ss_dssp EEEECTTSHHHHHHSTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCCSSTHHHHHHHHHH
T ss_pred eecccCCCcHHhceecccCCeeCCCCCCHHHHHHHHHHHHHHHHHHcCccceEEEeccCcccCCCcccchHHHHHHHHHh
Confidence 99987 899999999999999999999999999999998 34588888752 123456788999
Q ss_pred HHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 166 IEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 166 l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
+++.|++.+.++.......+.......+.+++++.++.||++ ||+.|++++++++++..||.|.+||+++.||+|.++
T Consensus 250 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~ik~~~~~~v~~-~g~~~~~~ae~~l~~G~aD~V~~gR~~ladPdlp~k 327 (358)
T 4a3u_A 250 LSDLDIAFLGMREGAVDGTFGKTDQPKLSPEIRKVFKPPLVL-NQDYTFETAQAALDSGVADAISFGRPFIGNPDLPRR 327 (358)
T ss_dssp HHHHTCSEEEEECCBTTCSSSBCSSCCCHHHHHHHCCSCEEE-ESSCCHHHHHHHHHHTSCSEEEESHHHHHCTTHHHH
T ss_pred hhccCccccccccccccCcccccccHHHHHHHHHhcCCcEEE-eCCCCHHHHHHHHHcCCceEeHhhHHHHhChhHHHH
Confidence 999999999998765544333222334567788877877775 667899999999976569999999999999999887
No 32
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=99.93 E-value=5.6e-26 Score=215.60 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=162.7
Q ss_pred CCCCceEEcccc--CCCC----HHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCC
Q 020428 2 DYQNKLVLAPMV--RVGT----LPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQER 75 (326)
Q Consensus 2 ~l~~~iilAPM~--g~t~----~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (326)
+++.|+++|||+ ++++ .+++++|.++|+.+++|+|.+ ..+.. +.. .. .+
T Consensus 78 ~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s-~~le~----------------------v~~-~~-~~ 132 (368)
T 2nli_A 78 KIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSG-ATFEE----------------------ISE-GL-NG 132 (368)
T ss_dssp EESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCS-SCHHH----------------------HHH-HH-TT
T ss_pred ecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHh-HHHHH----------------------HHH-hC-CC
Confidence 467899999999 7774 799999999999999999886 22211 001 11 13
Q ss_pred CcEEEEECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCcccc-----------------cc-----ccccccc---c--C
Q 020428 76 NHVVFQMGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFS-----------------VS-----GGMGAAL---L--S 126 (326)
Q Consensus 76 ~p~~vQl~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~-----------------~~-----~~~G~~l---~--~ 126 (326)
.|+.+||++ .|++...++++++.+ |++.|+||++||.... .. .+.|+.+ + .
T Consensus 133 ~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~ 212 (368)
T 2nli_A 133 GPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGAS 212 (368)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTB
T ss_pred CCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhcc
Confidence 489999987 788888999998876 9999999999998211 11 3346554 3 3
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCc
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIP 204 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iP 204 (326)
++.+..++++++++.+++||++|.- .+.+.++.+.++|+|+|+|++....+.+.+++.++.+.++++.+ ++|
T Consensus 213 d~~~~~~~i~~lr~~~~~PvivK~v------~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ip 286 (368)
T 2nli_A 213 KQKISPRDIEEIAGHSGLPVFVKGI------QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVP 286 (368)
T ss_dssp CSBCCHHHHHHHHHHSSSCEEEEEE------CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSC
T ss_pred CchhhHHHHHHHHHHcCCCEEEEcC------CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCe
Confidence 7788888999999999999999963 23577899999999999997765556677889999999999988 699
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
||++|||+|++|+.+++ ..|||+|||||+++..
T Consensus 287 Via~GGI~~g~D~~kal-alGAd~V~iGr~~l~~ 319 (368)
T 2nli_A 287 IVFDSGVRRGEHVAKAL-ASGADVVALGRPVLFG 319 (368)
T ss_dssp EEECSSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred EEEECCCCCHHHHHHHH-HcCCCEEEECHHHHHH
Confidence 99999999999999999 5999999999976643
No 33
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=99.92 E-value=5.1e-25 Score=210.45 Aligned_cols=205 Identities=18% Similarity=0.194 Sum_probs=159.2
Q ss_pred CCCCceEEccccCCCCHH-------HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCC
Q 020428 2 DYQNKLVLAPMVRVGTLP-------FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQE 74 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~-------fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (326)
+++.|+++||| |+++.. +++.|.++|+.+++|+|.+ ..+.. +... . .
T Consensus 92 ~l~~Pi~iAPm-g~~~l~~~~~e~~laraA~~~G~~~~~s~~~s-~~le~----------------------v~~~-~-~ 145 (392)
T 2nzl_A 92 RVSMPICVGAT-AMQRMAHVDGELATVRACQSLGTGMMLSSWAT-SSIEE----------------------VAEA-G-P 145 (392)
T ss_dssp EESSSEEECCC-SCGGGTSTTHHHHHHHHHHHHTCEEEECTTCS-SCHHH----------------------HHHH-C-T
T ss_pred ecCCceEeccc-cccccccchHHHHHHHHHHHcCCCeeccchHH-HHHHH----------------------HHHh-c-C
Confidence 46789999999 777654 9999999999999999775 22211 0011 1 2
Q ss_pred CCcEEEEECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCcc---------------cc-----c------cc----cccc
Q 020428 75 RNHVVFQMGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKS---------------FS-----V------SG----GMGA 122 (326)
Q Consensus 75 ~~p~~vQl~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~---------------~~-----~------~~----~~G~ 122 (326)
+.|+.+||++ .|++...+.++++++ |++.++||++||.. ++ . .. +.|+
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 3589999987 788888899988876 99999999999985 22 0 00 1222
Q ss_pred ---cccC---ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHH
Q 020428 123 ---ALLS---KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIAD 196 (326)
Q Consensus 123 ---~l~~---~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~ 196 (326)
.++. +|++..+.++++++.+++||.+|.- .+.+.|+.+.++|+|+|+|+++...+.+.+++.++.+.+
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv------~~~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~ 299 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI------LRGDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPE 299 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEE------CCHHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHH
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEec------CCHHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHH
Confidence 2444 7877888899999999999999963 125668999999999999987766667778899999999
Q ss_pred HHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 197 IVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 197 i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+++.+ ++|||++|||+|++|+.+++ ..|||+||+||+++...
T Consensus 300 v~~av~~~ipVia~GGI~~g~Dv~kal-alGAd~V~iGr~~l~~~ 343 (392)
T 2nzl_A 300 IVEAVEGKVEVFLDGGVRKGTDVLKAL-ALGAKAVFVGRPIVWGL 343 (392)
T ss_dssp HHHHHTTSSEEEECSSCCSHHHHHHHH-HTTCSEEEECHHHHHHH
T ss_pred HHHHcCCCCEEEEECCCCCHHHHHHHH-HhCCCeeEECHHHHHHH
Confidence 99988 59999999999999999999 59999999999777543
No 34
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.91 E-value=9.2e-24 Score=199.52 Aligned_cols=207 Identities=19% Similarity=0.235 Sum_probs=149.8
Q ss_pred CCCCceEEccccCCC-------CHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCC
Q 020428 2 DYQNKLVLAPMVRVG-------TLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQE 74 (326)
Q Consensus 2 ~l~~~iilAPM~g~t-------~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (326)
++++|+++|||+|++ +.+++..|.++|++++++++.+. +...... .+ | + +.+. ...
T Consensus 53 ~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~--l~~~~~~-----~~--~------~-~~~~-~~~ 115 (349)
T 1p0k_A 53 SSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA--LKDPSER-----LS--Y------E-IVRK-ENP 115 (349)
T ss_dssp EESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT--TTCHHHH-----HH--H------H-HHHH-HCS
T ss_pred ccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc--ccCcccc-----cc--e------e-hhhh-hCC
Confidence 468999999999999 78999999999999888887653 2110000 00 0 0 0111 123
Q ss_pred CCcEEEEEC-CCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHH--HHHHHHHHhhcccCcEEEEec
Q 020428 75 RNHVVFQMG-TSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPEL--IHDILTMLKRNLDVPVTCKIR 151 (326)
Q Consensus 75 ~~p~~vQl~-g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~--~~~iv~~v~~~~~~pv~vK~r 151 (326)
+.|+++|+. |.+++.+.++++. .|+|+|+||++||+..... .| ++++ +.++++++++.+++||.+|+.
T Consensus 116 ~~pv~~~i~~~~~~~~~~~~~~~--~gad~i~i~~~~~~~~~~~--~~-----~~~~~~~~~~i~~vr~~~~~Pv~vK~~ 186 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAKEAVEM--IGANALQIHLNVIQEIVMP--EG-----DRSFSGALKRIEQICSRVSVPVIVKEV 186 (349)
T ss_dssp SSCEEEEEETTCCHHHHHHHHHH--TTCSEEEEEECTTTTC---------------CTTHHHHHHHHHHHCSSCEEEEEE
T ss_pred CceeEEeecCCCCHHHHHHHHHh--cCCCeEEecccchhhhcCC--CC-----CcchHHHHHHHHHHHHHcCCCEEEEec
Confidence 469999998 7888877765443 2799999999999754322 11 4443 778899999988999999984
Q ss_pred -CCCChHHHHHHHHHHHHcCCcEEEE--eecc--------cCC------CCCCcCCHHHHHHHHHhc-CCcEEEeCCCCC
Q 020428 152 -LLKSSQDTVELARRIEKTGVSALAV--HGRK--------VAD------RPRDPAKWGEIADIVAAL-SIPVIANGDVFE 213 (326)
Q Consensus 152 -~g~~~~~~~e~a~~l~~~G~d~i~v--h~r~--------~~~------~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s 213 (326)
.+.+ .+.++.+.++|+|+|++ ||++ +.. .+.+++.++.+.++++.+ ++|||++|||+|
T Consensus 187 ~~~~~----~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GGI~~ 262 (349)
T 1p0k_A 187 GFGMS----KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEFPASTMIASGGLQD 262 (349)
T ss_dssp SSCCC----HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred CCCCC----HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhcCCCeEEEECCCCC
Confidence 4444 46688999999999999 6664 211 345677889999999887 899999999999
Q ss_pred HHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 214 YDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 214 ~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
++|+.+++ ..|||+|+|||+++..+
T Consensus 263 ~~d~~k~l-~~GAd~V~iG~~~l~~~ 287 (349)
T 1p0k_A 263 ALDVAKAI-ALGASCTGMAGHFLKAL 287 (349)
T ss_dssp HHHHHHHH-HTTCSEEEECHHHHHHH
T ss_pred HHHHHHHH-HcCCCEEEEcHHHHHHH
Confidence 99999999 58999999999888754
No 35
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A*
Probab=99.91 E-value=2.3e-24 Score=206.90 Aligned_cols=241 Identities=12% Similarity=0.129 Sum_probs=167.6
Q ss_pred CCCCCceEEccccCC--------C--CHHHHHHHHHc--CCCeEEeCceecccccccccccccccCcccccccCCcceee
Q 020428 1 MDYQNKLVLAPMVRV--------G--TLPFRLLAAQY--GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVF 68 (326)
Q Consensus 1 l~l~~~iilAPM~g~--------t--~~~fr~~~~~~--G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (326)
++|+|||++|||... + +...+...+++ |+|+++||.+.++.-....+ ...+.++-......+.+.
T Consensus 26 l~lkNRiv~aPm~~~~a~~~g~v~~~d~~~~yy~~rA~GG~GLIite~~~V~~~g~~~~---~~~gi~~d~~i~~~k~l~ 102 (400)
T 4gbu_A 26 NELLHRAVIPPLTRMRALHPGNIPNRDWAVEYYTQRAQRPGTMIITEGAFISPQAGGYD---NAPGVWSEEQMVEWTKIF 102 (400)
T ss_dssp EEESSSEEBCCCCCCCCBTTTTBCCTTTHHHHHHHHTCSTTCEEECSCEESSGGGCCCT---TSCBSSSHHHHHHHHHHH
T ss_pred EEEcCcCEeCCccCCcCCCCCCCCCHHHHHHHHHHHHcCCeEEEEEcCeEECccccCCC---CCCccCCHHHHHHHHHHH
Confidence 468999999999853 2 23444555554 68999999987765432211 222222210001122246
Q ss_pred ecccCCCCcEEEEECCCC--------------------------------------------------HHHHHHHHHHhh
Q 020428 69 RTCHQERNHVVFQMGTSD--------------------------------------------------AVRALTAAKMVC 98 (326)
Q Consensus 69 ~~~~~~~~p~~vQl~g~~--------------------------------------------------~~~~~~aa~~~~ 98 (326)
+.+|+.+.++++||++.. .++|++||++++
T Consensus 103 davH~~G~~i~~QL~H~Gr~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~pr~mt~~eI~~ii~~F~~AA~rA~ 182 (400)
T 4gbu_A 103 NAIHEKKSFVWVQLAVLGWAAFPDNLARDGLRYDSASDNVFMDAEQEAKAKKANNPQHSLTKDEIKQYIKEYVQAAKNSI 182 (400)
T ss_dssp HHHHHTTCEEEEEEECCGGGSCHHHHHHTTCCCEESCSSCCSCHHHHHHHHHTTCCCEECCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCceEEeeeecCcccCccccccCCCcccCccccccCCCCcccccccCCCCCccCCHHHHHHHHHHHHHHHHHHH
Confidence 677888899999995311 157999999998
Q ss_pred c-CCCEEEEccC---------CCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCC------CC------
Q 020428 99 K-DVAAIDINMG---------CPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLL------KS------ 155 (326)
Q Consensus 99 ~-~~d~idlN~g---------cP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g------~~------ 155 (326)
+ |||+||||++ +|..|.|+|.||+++.++.+++.||+++||+++ .-||.+|+... .+
T Consensus 183 ~AGFDgVEIH~AhGYLl~QFLSp~tN~RtDeYGGS~ENR~Rf~lEVi~aVr~~vg~d~vgvRlS~~~~~~~~~~~~~~~~ 262 (400)
T 4gbu_A 183 AAGADGVEIHSANGYLLNQFLDPHSNTRTDEYGGSIENRARFTLEVVDALVEAIGHEKVGLRLSPYGVFNSMSGGAETGI 262 (400)
T ss_dssp HTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCCGGGSTTH
T ss_pred hcCcCeeeecccccchHHheecCcCCCCccccCCcHHHHHHHHHHHHHHHHHHcCCCcEEEEeccccccCCCCccchhhh
Confidence 8 9999999987 899999999999999999999999999999998 34899998751 11
Q ss_pred hHHHHHHHHHHHHcC-----CcEEEEeecccCCC--CCCc--CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCC
Q 020428 156 SQDTVELARRIEKTG-----VSALAVHGRKVADR--PRDP--AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGA 226 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G-----~d~i~vh~r~~~~~--~~~~--~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Ga 226 (326)
..+..+++..++..+ .+.+++........ ..+. ........+++.+++|||++|+|.+.+++.+.+...+|
T Consensus 263 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~~~~pvi~~G~~~~~~~~~~~~~~~~a 342 (400)
T 4gbu_A 263 VAQYAYVAGELEKRAKAGKRLAFVHLVEPRVTNPFLTEGEGEYEGGSNDFVYSIWKGPVIRAGNFALHPEVVREEVKDKR 342 (400)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSEEEEECTTCSSTTSCTTTTCCCSCCSTHHHHHCCSCEEEESSCTTCHHHHHHHTTSTT
T ss_pred HHHHHHHHHHHHHhhccCccccceeeecccCCCcccccccchhhhHHHHHHHHHhCCCEEEeCCCCChHHHHHHHHcCCC
Confidence 234566666666543 44555543221111 0111 11112234677789999999999987776666656789
Q ss_pred cEEEeccchhcCcccccc
Q 020428 227 SSVMAARGALWNASIFSS 244 (326)
Q Consensus 227 d~VmiGr~~l~~P~lf~~ 244 (326)
|.|.+||+++.||.|.++
T Consensus 343 DlV~~gR~~iadPdl~~k 360 (400)
T 4gbu_A 343 TLIGYGRFFISNPDLVDR 360 (400)
T ss_dssp EEEECCHHHHHCTTHHHH
T ss_pred eEhHHHHHHHHCcHHHHH
Confidence 999999999999999887
No 36
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=99.91 E-value=1.2e-23 Score=199.95 Aligned_cols=203 Identities=20% Similarity=0.211 Sum_probs=157.5
Q ss_pred CCCCceEEccccCCCCHH-------HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCC
Q 020428 2 DYQNKLVLAPMVRVGTLP-------FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQE 74 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~-------fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (326)
+++.|+++||| |+++.+ +++.|.++|+.+++++|.+.. +.. +....+
T Consensus 69 ~~~~Pi~iAPm-g~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~-iee----------------------v~~~~~-- 122 (370)
T 1gox_A 69 KISMPIMIAPT-AMQKMAHPEGEYATARAASAAGTIMTLSSWATSS-VEE----------------------VASTGP-- 122 (370)
T ss_dssp EESSSEEECCC-SCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSC-HHH----------------------HHTTCC--
T ss_pred ccCCceeEccc-chhhhccchHHHHHHHHHHHcCCCeeccCCCCCC-HHH----------------------HHhhcC--
Confidence 46789999999 888776 999999999999999877531 100 011111
Q ss_pred CCcEEEEEC-CCCHHHHHHHHHHhhc-CCCEEEEccCCCcc---------------c-----ccc-------ccccccc-
Q 020428 75 RNHVVFQMG-TSDAVRALTAAKMVCK-DVAAIDINMGCPKS---------------F-----SVS-------GGMGAAL- 124 (326)
Q Consensus 75 ~~p~~vQl~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~---------------~-----~~~-------~~~G~~l- 124 (326)
.|..+||+ +.|++...+.++++.+ |++.|+||++||.. . +.. ...|+.+
T Consensus 123 -~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~ 201 (370)
T 1gox_A 123 -GIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLS 201 (370)
T ss_dssp -CCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HH
T ss_pred -CCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHH
Confidence 47999995 8899888888888876 99999999999975 1 111 2334444
Q ss_pred -----cCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHH
Q 020428 125 -----LSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVA 199 (326)
Q Consensus 125 -----~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~ 199 (326)
+.+|.+..+.++++++.+++||.+|... +.+.++.+.++|+|+|+|.+....+.+.++++++.+.++++
T Consensus 202 ~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~------~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~ 275 (370)
T 1gox_A 202 SYVAGQIDRSLSWKDVAWLQTITSLPILVKGVI------TAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVK 275 (370)
T ss_dssp HHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCC------SHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHH
T ss_pred HHHHhhcCccchHHHHHHHHHHhCCCEEEEecC------CHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHH
Confidence 4567766678999999999999999973 24678999999999999954333344556788999999999
Q ss_pred hc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 200 AL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 200 ~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
.+ ++|||++|||+|++|+.+++ ..|||+|||||+++..
T Consensus 276 ~~~~~ipvia~GGI~~~~D~~k~l-~~GAdaV~iGr~~l~~ 315 (370)
T 1gox_A 276 AAQGRIPVFLDGGVRRGTDVFKAL-ALGAAGVFIGRPVVFS 315 (370)
T ss_dssp HTTTSSCEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHH
T ss_pred HhCCCCEEEEECCCCCHHHHHHHH-HcCCCEEeecHHHHHH
Confidence 88 79999999999999999999 5899999999988754
No 37
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=99.90 E-value=1.1e-22 Score=192.41 Aligned_cols=238 Identities=13% Similarity=0.058 Sum_probs=157.7
Q ss_pred CCCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceecccccc-ccccc----ccccCcccccccCCc---ceeeeccc
Q 020428 1 MDYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLLK-CERRV----NEYIGSTDFVEKGTD---SVVFRTCH 72 (326)
Q Consensus 1 l~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~-~~~~~----~~~~~~~~~~~~~~~---~~~~~~~~ 72 (326)
++++||+++|.-.--.+..+-..+...|+|.+.+..++.++-.. ..+.. ...++..-|-+.... +.+.....
T Consensus 44 l~f~NPvglAaG~~~~~~e~~~~l~~~G~G~v~~~tvt~~pq~GNp~PR~~~l~~~~iN~~G~~n~G~~~~~~~~~~~~~ 123 (354)
T 3tjx_A 44 NTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSMGLPNNGFDFYLAYAAEQHD 123 (354)
T ss_dssp EEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECCCCCBCCHHHHHHHHHHTCC
T ss_pred EEcCCCcEEccCCCCCCHHHHHHHHHcCCCEEEeCCcCcccccCCCCCeEEEcccccccccccCCHHHHHHHHHHHHhhc
Confidence 46899999995211245666666777899988888777654211 11110 001111111111100 00111222
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhh----cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVC----KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC 148 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~----~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v 148 (326)
....|+++||+|++++++.+.++.+. .++|.|+||++||+.+ .+..+..+++.+.++++++++.+..|+.+
T Consensus 124 ~~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~-----g~~~l~~~~~~~~~i~~~v~~~~~~pv~v 198 (354)
T 3tjx_A 124 YGKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVP-----GKPQVAYDFDAMRQCLTAVSEVYPHSFGV 198 (354)
T ss_dssp TTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC--------------CTTSHHHHHHHHHHHHHHCCSCEEE
T ss_pred cCCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCc-----chhhhccCHHHHHHHHHHHHHHhhccccc
Confidence 33469999999999988877776654 3689999999999874 46678889999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcC-CcEEEEe----------ec---------ccCCCCCCcCCHHH----HHHHHHhc-CC
Q 020428 149 KIRLLKSSQDTVELARRIEKTG-VSALAVH----------GR---------KVADRPRDPAKWGE----IADIVAAL-SI 203 (326)
Q Consensus 149 K~r~g~~~~~~~e~a~~l~~~G-~d~i~vh----------~r---------~~~~~~~~~~~~~~----i~~i~~~~-~i 203 (326)
|++..++.......+..+.+.+ ++.++.. .+ +..+.+++++.++. +.++++.+ ++
T Consensus 199 K~~p~~~~~~~~~~~~~~~~~~~~~~i~~i~t~~~~~~id~~~~~~~~~~~~~~GGlSG~~~~~~a~~~v~~~~~~~~~~ 278 (354)
T 3tjx_A 199 KMPPYFDFAAFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGK 278 (354)
T ss_dssp EECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTS
T ss_pred ccCCCCCchhHHHHHHHHHhhcccchhheecccccccccccccccccccCcccccccCchhhHHHHHHHHHHHHHhcCCC
Confidence 9999887766667777776654 3444321 11 11234567777765 44555554 79
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh-cCcccccc
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMAARGAL-WNASIFSS 244 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l-~~P~lf~~ 244 (326)
|||++|||.|++|+.+++ ..|||+||||||++ .+|+++.+
T Consensus 279 pIIg~GGI~s~~Da~e~i-~aGAs~Vqv~Ta~~y~GP~~~~~ 319 (354)
T 3tjx_A 279 LIFGCGGVYTGEDAFLHV-LAGASMVQVGTALQEEGPSIFER 319 (354)
T ss_dssp EEEEESSCCSHHHHHHHH-HHTEEEEEECHHHHHHCTTHHHH
T ss_pred cEEEeCCcCCHHHHHHHH-HcCCCEEEEChhhhhcCchHHHH
Confidence 999999999999999999 69999999999975 68999876
No 38
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.89 E-value=7.9e-23 Score=201.34 Aligned_cols=207 Identities=17% Similarity=0.137 Sum_probs=160.0
Q ss_pred CCCCceEEccccC---C----CCHHHHHHHHH--cCCCeEEeCceecc-cccccccccccccCcccccccCCcceeeecc
Q 020428 2 DYQNKLVLAPMVR---V----GTLPFRLLAAQ--YGADITYGEEIIDH-KLLKCERRVNEYIGSTDFVEKGTDSVVFRTC 71 (326)
Q Consensus 2 ~l~~~iilAPM~g---~----t~~~fr~~~~~--~G~~l~~te~i~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (326)
+++.|+++|||++ . ++.++++.|++ +|+.+++++|.+.. +.+ ....
T Consensus 187 ~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v------------------------~~~~ 242 (511)
T 1kbi_A 187 HVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEI------------------------IEAA 242 (511)
T ss_dssp EESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHH------------------------HHTC
T ss_pred cCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHH------------------------Hhhc
Confidence 4678999999997 3 46899999999 99999999984321 111 0111
Q ss_pred cCCCCcEEEEEC-CCCHHHHHHHHHHhhc-CCCEEEEccCCCccc----ccc------------------c-ccc-cccc
Q 020428 72 HQERNHVVFQMG-TSDAVRALTAAKMVCK-DVAAIDINMGCPKSF----SVS------------------G-GMG-AALL 125 (326)
Q Consensus 72 ~~~~~p~~vQl~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~----~~~------------------~-~~G-~~l~ 125 (326)
+....|..+||+ +.|++...+++++++. |+++|.|+++||+.- ..+ + +.| +.++
T Consensus 243 ~~~~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~ 322 (511)
T 1kbi_A 243 PSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRAL 322 (511)
T ss_dssp CCSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGC
T ss_pred CCCCCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHH
Confidence 112348999997 8899999999999987 999999999999821 111 1 111 1223
Q ss_pred ---CChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-
Q 020428 126 ---SKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL- 201 (326)
Q Consensus 126 ---~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~- 201 (326)
.+|.+..++++++++.+++||++|.-. ..+.|+.++++|+|+|+|++....+.+.+++.++.+.++++.+
T Consensus 323 ~~~~d~~~~~~~i~~lr~~~~~PvivKgv~------~~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~ 396 (511)
T 1kbi_A 323 SKFIDPSLTWKDIEELKKKTKLPIVIKGVQ------RTEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILE 396 (511)
T ss_dssp BTTBCTTCCHHHHHHHHHHCSSCEEEEEEC------SHHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHH
T ss_pred hhccChHhHHHHHHHHHHHhCCcEEEEeCC------CHHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHH
Confidence 578877888999999999999999532 1567899999999999996554445556677899999998887
Q ss_pred ------CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 202 ------SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 202 ------~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
++|||++|||+|++|+.+++ ..|||+|||||+++...
T Consensus 397 ~~~~~~~ipVia~GGI~~g~Dv~kaL-alGAdaV~iGr~~l~~~ 439 (511)
T 1kbi_A 397 QRNLKDKLEVFVDGGVRRGTDVLKAL-CLGAKGVGLGRPFLYAN 439 (511)
T ss_dssp TTTCBTTBEEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHHHH
T ss_pred hhccCCCcEEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHHHH
Confidence 79999999999999999999 58999999999777543
No 39
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=99.89 E-value=6.7e-23 Score=192.33 Aligned_cols=190 Identities=16% Similarity=0.173 Sum_probs=148.8
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
.+++|+++|||.++|+..++..+.++|+ |++.+++++++.+....+.. + ...+.|+.+
T Consensus 10 ~~~~Pii~apM~g~s~~~la~av~~aG~lG~i~~~~~~~~~~~~~i~~i-------------------~--~~~~~p~gv 68 (332)
T 2z6i_A 10 KIDYPIFQGGMAWVADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKI-------------------K--SLTDKPFGV 68 (332)
T ss_dssp TCSSSEEECCCTTTCCHHHHHHHHHHTSBEEEECTTCCHHHHHHHHHHH-------------------H--HHCCSCEEE
T ss_pred CCCCCEEeCCCCCCCcHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHH-------------------H--HhcCCCEEE
Confidence 5789999999999999999999999986 99999887766543211100 0 112358999
Q ss_pred EECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHH
Q 020428 81 QMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDT 159 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~ 159 (326)
|++..+++ +.+.++.+.+ |+|+|++|+|||.. +++.+++. ++||.+|+. +
T Consensus 69 nl~~~~~~-~~~~~~~a~~~g~d~V~~~~g~p~~--------------------~i~~l~~~-g~~v~~~v~-------~ 119 (332)
T 2z6i_A 69 NIMLLSPF-VEDIVDLVIEEGVKVVTTGAGNPSK--------------------YMERFHEA-GIIVIPVVP-------S 119 (332)
T ss_dssp EECTTSTT-HHHHHHHHHHTTCSEEEECSSCGGG--------------------THHHHHHT-TCEEEEEES-------S
T ss_pred EecCCCCC-HHHHHHHHHHCCCCEEEECCCChHH--------------------HHHHHHHc-CCeEEEEeC-------C
Confidence 99986654 4555555555 99999999999832 35666654 899999882 3
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
.+.++.+++.|+|+|.++|+...+......+|++++++++.+++|||++|||.|++++.+++ ..|||+|++||+++.+|
T Consensus 120 ~~~a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~~~~~~~~al-~~GAdgV~vGs~~l~~~ 198 (332)
T 2z6i_A 120 VALAKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAISIPVIAAGGIADGEGAAAGF-MLGAEAVQVGTRFVVAK 198 (332)
T ss_dssp HHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHTBT
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEecHHHhcCc
Confidence 56788899999999999987543222235689999999999999999999999999999999 48999999999999998
Q ss_pred ccc
Q 020428 240 SIF 242 (326)
Q Consensus 240 ~lf 242 (326)
...
T Consensus 199 e~~ 201 (332)
T 2z6i_A 199 ESN 201 (332)
T ss_dssp TCC
T ss_pred ccc
Confidence 653
No 40
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.86 E-value=1.4e-21 Score=183.27 Aligned_cols=206 Identities=19% Similarity=0.184 Sum_probs=143.9
Q ss_pred CCCCceEEccccCCCC------HHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCC
Q 020428 2 DYQNKLVLAPMVRVGT------LPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQER 75 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~------~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (326)
++++|+++|||++.++ .+++.+|+++|+.+++++|.+. +..... ..+. + ++ ..+.+
T Consensus 56 ~l~~P~~iapm~g~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~--le~~~~--------~~~~-----q--l~-~~~~d 117 (332)
T 1vcf_A 56 TLKAPFLIGAMTGGEENGERINLALAEAAEALGVGMMLGSGRIL--LERPEA--------LRSF-----R--VR-KVAPK 117 (332)
T ss_dssp EESSSEEECCCC---CCHHHHHHHHHHHHHHHTCEEEEEECHHH--HHCTTT--------HHHH-----C--CT-TTCSS
T ss_pred ccCCceEEeccccCCcchhHHHHHHHHHHHHcCCCEEeCCchhc--ccCCCc--------cceE-----E--ee-ccCCC
Confidence 4678999999999875 3899999999999999998875 321100 0000 0 01 11224
Q ss_pred CcEE-----EEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEE-
Q 020428 76 NHVV-----FQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCK- 149 (326)
Q Consensus 76 ~p~~-----vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK- 149 (326)
.|++ .|+++.+++.+.++++.+ +++++.+|..+..... . .|.. +.+.+.++++++++ +++||++|
T Consensus 118 ~pv~~~~~~~q~~~~~~~~~~~a~~~~--~~~a~~i~~n~~~~~~-~--~~~~---~~~~~~~~i~~vr~-~~~Pv~vK~ 188 (332)
T 1vcf_A 118 ALLIANLGLAQLRRYGRDDLLRLVEML--EADALAFHVNPLQEAV-Q--RGDT---DFRGLVERLAELLP-LPFPVMVKE 188 (332)
T ss_dssp SCEEEEEEGGGGGTCCHHHHHHHHHHH--TCSEEEEECCHHHHHH-T--TSCC---CCTTHHHHHHHHCS-CSSCEEEEC
T ss_pred ceeecccChhhhhccChHHHHHHHhhc--CCCceeeccchHHHHh-c--CCCc---cHHHHHHHHHHHHc-CCCCEEEEe
Confidence 5776 566778899988887765 4666555543321111 1 1111 11236788999999 99999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCcEEEE--eecc--------cCC--------CCCCcCCHHHHHHHHHhc-CCcEEEeCC
Q 020428 150 IRLLKSSQDTVELARRIEKTGVSALAV--HGRK--------VAD--------RPRDPAKWGEIADIVAAL-SIPVIANGD 210 (326)
Q Consensus 150 ~r~g~~~~~~~e~a~~l~~~G~d~i~v--h~r~--------~~~--------~~~~~~~~~~i~~i~~~~-~iPVi~nGg 210 (326)
+..|.+. +.++.++++|+|+|+| ||++ +.+ .+.+++.++.+.++++.+ ++|||++||
T Consensus 189 v~~g~~~----e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~~ipvia~GG 264 (332)
T 1vcf_A 189 VGHGLSR----EAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLPHLPLVASGG 264 (332)
T ss_dssp SSSCCCH----HHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCSSSCEEEESS
T ss_pred cCCCCCH----HHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcCCCeEEEECC
Confidence 5444443 4578999999999999 5554 221 345677899999999998 899999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 211 VFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 211 I~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
|+|++|+.+++. .|||+||+||+++..+
T Consensus 265 I~~~~d~~kal~-~GAd~V~igr~~l~~~ 292 (332)
T 1vcf_A 265 VYTGTDGAKALA-LGADLLAVARPLLRPA 292 (332)
T ss_dssp CCSHHHHHHHHH-HTCSEEEECGGGHHHH
T ss_pred CCCHHHHHHHHH-hCCChHhhhHHHHHHH
Confidence 999999999994 8999999999988655
No 41
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=99.85 E-value=1.4e-20 Score=176.11 Aligned_cols=189 Identities=17% Similarity=0.223 Sum_probs=143.7
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
.++.||++|||+++|+..++..+.+.|+ +++.+.+++++.+....+. .....+.|+.+
T Consensus 24 ~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~---------------------i~~~~~~p~gV 82 (326)
T 3bo9_A 24 EIEHPILMGGMAWAGTPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISE---------------------LRQKTDKPFGV 82 (326)
T ss_dssp TCSSSEEECCCTTTSCHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHH---------------------HHTTCSSCEEE
T ss_pred CCCCCEEECCCCCCCCHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHH---------------------HHHhcCCCEEE
Confidence 5789999999999999999999999986 8888877766554221110 01112358999
Q ss_pred EECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHH
Q 020428 81 QMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDT 159 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~ 159 (326)
|++..+++ +.+.++.+. .++|.|.+++|||.. +++.+++. ++++.+++. +
T Consensus 83 nl~~~~~~-~~~~~~~~~~~g~d~V~l~~g~p~~--------------------~~~~l~~~-g~~v~~~v~-------s 133 (326)
T 3bo9_A 83 NIILVSPW-ADDLVKVCIEEKVPVVTFGAGNPTK--------------------YIRELKEN-GTKVIPVVA-------S 133 (326)
T ss_dssp EEETTSTT-HHHHHHHHHHTTCSEEEEESSCCHH--------------------HHHHHHHT-TCEEEEEES-------S
T ss_pred EEeccCCC-HHHHHHHHHHCCCCEEEECCCCcHH--------------------HHHHHHHc-CCcEEEEcC-------C
Confidence 99886553 233334443 489999999998822 24445443 788888773 3
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
.+.++.+.+.|+|+|.++++...+......+|+.++++++.+++|||++|||.|++++.+++ ..||++|++||+++..+
T Consensus 134 ~~~a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI~~~~dv~~al-~~GA~gV~vGs~~~~~~ 212 (326)
T 3bo9_A 134 DSLARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGIADGRGMAAAF-ALGAEAVQMGTRFVASV 212 (326)
T ss_dssp HHHHHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHHTBS
T ss_pred HHHHHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHH-HhCCCEEEechHHHcCc
Confidence 56678889999999999998655432235689999999999999999999999999999999 58999999999999877
Q ss_pred cc
Q 020428 240 SI 241 (326)
Q Consensus 240 ~l 241 (326)
..
T Consensus 213 e~ 214 (326)
T 3bo9_A 213 ES 214 (326)
T ss_dssp SC
T ss_pred cc
Confidence 64
No 42
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=99.84 E-value=2.5e-20 Score=177.67 Aligned_cols=202 Identities=16% Similarity=0.119 Sum_probs=150.6
Q ss_pred CCCCceEEccccC--C----CCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCC
Q 020428 2 DYQNKLVLAPMVR--V----GTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQER 75 (326)
Q Consensus 2 ~l~~~iilAPM~g--~----t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (326)
++++|+++|||++ . ++.++++.|.++|++++.++ .+..++.. +. ...+
T Consensus 70 ~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss-~s~~~le~----------------------i~---~~~~ 123 (380)
T 1p4c_A 70 RQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLST-ASNMSIED----------------------LA---RQCD 123 (380)
T ss_dssp EESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECT-TCSSCHHH----------------------HH---HHCC
T ss_pred ecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCc-cccCCHHH----------------------HH---hccC
Confidence 4788999999976 5 67899999999999998886 33322211 00 0113
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEE--------------ccCCCccc---cc--------c--ccccccc---
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDI--------------NMGCPKSF---SV--------S--GGMGAAL--- 124 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idl--------------N~gcP~~~---~~--------~--~~~G~~l--- 124 (326)
.|..+||.....+...+..+++.+ |+..+.| |.||+.+. .. + ...+.++
T Consensus 124 ~~~~fQly~~~~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~ala~~ 203 (380)
T 1p4c_A 124 GDLWFQLYVIHREIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGIDLGKMDKANLEMQAAL 203 (380)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTCCCSCCSSTTTTTHHHH
T ss_pred CCeEEEEEechHHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhhhhhccCcccchHHHHH
Confidence 478999975445555566666655 8876654 66885431 11 0 1112222
Q ss_pred cC---ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEE--eecccCCCCCCcCCHHHHHHHHH
Q 020428 125 LS---KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAV--HGRKVADRPRDPAKWGEIADIVA 199 (326)
Q Consensus 125 ~~---~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~v--h~r~~~~~~~~~~~~~~i~~i~~ 199 (326)
+. +|++..++++++++.+++||.+|.- .+.+.++.+.++|+|+|+| ||++ +.+.++++++.+.++++
T Consensus 204 ~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv------~t~e~a~~a~~aGad~I~vs~~gg~--~~d~~~~~~~~l~~v~~ 275 (380)
T 1p4c_A 204 MSRQMDASFNWEALRWLRDLWPHKLLVKGL------LSAEDADRCIAEGADGVILSNHGGR--QLDCAISPMEVLAQSVA 275 (380)
T ss_dssp TSSCCCTTCCHHHHHHHHHHCCSEEEEEEE------CCHHHHHHHHHTTCSEEEECCGGGT--SCTTCCCGGGTHHHHHH
T ss_pred HHhhcCccccHHHHHHHHHhcCCCEEEEec------CcHHHHHHHHHcCCCEEEEcCCCCC--cCCCCcCHHHHHHHHHH
Confidence 22 7888889999999999999999952 3456799999999999999 5543 44557788999999999
Q ss_pred hcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 200 ALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 200 ~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
.+++|||++|||++++|+.+++ ..|||+||+||+++..
T Consensus 276 ~~~~pVia~GGI~~~~dv~kal-~~GAdaV~iGr~~l~~ 313 (380)
T 1p4c_A 276 KTGKPVLIDSGFRRGSDIVKAL-ALGAEAVLLGRATLYG 313 (380)
T ss_dssp HHCSCEEECSSCCSHHHHHHHH-HTTCSCEEESHHHHHH
T ss_pred HcCCeEEEECCCCCHHHHHHHH-HhCCcHhhehHHHHHH
Confidence 9999999999999999999999 5899999999999864
No 43
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=99.82 E-value=1.2e-19 Score=169.79 Aligned_cols=188 Identities=16% Similarity=0.162 Sum_probs=140.9
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCcee-cccccccccccccccCcccccccCCcceeeecccCCCCcEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEII-DHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVV 79 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 79 (326)
.++.||++|||+|+|+..++..+.+.|+ +++.+++.+ ++.+....+ +.....+.|+.
T Consensus 13 ~~~~Pii~apM~gvs~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~---------------------~i~~~~~~p~~ 71 (328)
T 2gjl_A 13 GVEHPIMQGGMQWVGRAEMAAAVANAGGLATLSALTQPSPEALAAEIA---------------------RCRELTDRPFG 71 (328)
T ss_dssp TCSSSEEECCCTTTCSHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHH---------------------HHHHHCSSCCE
T ss_pred CCCCCEEECCCCCCCcHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHH---------------------HHHHhcCCCeE
Confidence 5688999999999999999999999985 888776544 333221000 00011235899
Q ss_pred EEECCC----CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 80 FQMGTS----DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 80 vQl~g~----~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
+|++.+ +++ +.+.++.+.+ ++|.|.+|+|||. ++++.+++. ++|+..++.
T Consensus 72 v~l~v~~~~~~~~-~~~~~~~~~~~g~d~V~~~~g~p~--------------------~~~~~l~~~-gi~vi~~v~--- 126 (328)
T 2gjl_A 72 VNLTLLPTQKPVP-YAEYRAAIIEAGIRVVETAGNDPG--------------------EHIAEFRRH-GVKVIHKCT--- 126 (328)
T ss_dssp EEEEECCCSSCCC-HHHHHHHHHHTTCCEEEEEESCCH--------------------HHHHHHHHT-TCEEEEEES---
T ss_pred EEEeccccccCcc-HHHHHHHHHhcCCCEEEEcCCCcH--------------------HHHHHHHHc-CCCEEeeCC---
Confidence 999876 332 4444555444 8999999998871 345566655 788887763
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCC--CcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPR--DPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~--~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.+.++.+.+.|+|+|.++|++..+... ...+|+.++++++.+++||+++|||.+++++.++++ .|||+|++|
T Consensus 127 ----t~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaaGGI~~~~~v~~al~-~GAdgV~vG 201 (328)
T 2gjl_A 127 ----AVRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIASGGFADGRGLVAALA-LGADAINMG 201 (328)
T ss_dssp ----SHHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHH-HTCSEEEES
T ss_pred ----CHHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHH-cCCCEEEEC
Confidence 2456778899999999999887643211 246899999999999999999999999999999994 899999999
Q ss_pred cchhcCcc
Q 020428 233 RGALWNAS 240 (326)
Q Consensus 233 r~~l~~P~ 240 (326)
|+++..|.
T Consensus 202 s~~~~~~e 209 (328)
T 2gjl_A 202 TRFLATRE 209 (328)
T ss_dssp HHHHTSSS
T ss_pred HHHHcCcc
Confidence 99999886
No 44
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=99.82 E-value=1.3e-19 Score=172.21 Aligned_cols=191 Identities=17% Similarity=0.200 Sum_probs=142.4
Q ss_pred CCceEEccccC-CCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEE
Q 020428 4 QNKLVLAPMVR-VGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQ 81 (326)
Q Consensus 4 ~~~iilAPM~g-~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQ 81 (326)
+.||++|||++ +|+..++..+.+.|+ |++.+++++++.+....+.. ......|+.||
T Consensus 10 ~~Pii~apMaggvs~~~la~av~~aGglG~i~~~~~s~~~l~~~i~~~---------------------~~~~~~p~gVn 68 (369)
T 3bw2_A 10 PLPIVQAPMAGGVSVPQLAAAVCEAGGLGFLAAGYKTADGMYQEIKRL---------------------RGLTGRPFGVN 68 (369)
T ss_dssp SSSEEECCCTTTTSCHHHHHHHHHTTSBEEEECTTSCHHHHHHHHHHH---------------------HHHCCSCEEEE
T ss_pred cCCEEeCCCCCCCCcHHHHHHHHHCCCEEEcCCCCCCHHHHHHHHHHH---------------------HHhCCCCeEEE
Confidence 77999999995 999999999999986 88988988887664321110 01112488999
Q ss_pred ECCCCHH----------------------------------HHHHHHHHhhc-CCCEEEEccCCCccccccccccccccC
Q 020428 82 MGTSDAV----------------------------------RALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLS 126 (326)
Q Consensus 82 l~g~~~~----------------------------------~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~ 126 (326)
++...+. .+.+.++.+.+ +++.|.+++|||..
T Consensus 69 l~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~~~------------- 135 (369)
T 3bw2_A 69 VFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVPDR------------- 135 (369)
T ss_dssp EECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCCCH-------------
T ss_pred EecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCCcH-------------
Confidence 8765431 12344455544 89999999999842
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCC---------C--cCCHHHHH
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPR---------D--PAKWGEIA 195 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~---------~--~~~~~~i~ 195 (326)
++++.+++. +++|.+++. +.+.++.+++.|+|+|.+++++..+... + ...|+.++
T Consensus 136 ------~~i~~~~~~-g~~v~~~v~-------t~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~ 201 (369)
T 3bw2_A 136 ------EVIARLRRA-GTLTLVTAT-------TPEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLA 201 (369)
T ss_dssp ------HHHHHHHHT-TCEEEEEES-------SHHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHH
T ss_pred ------HHHHHHHHC-CCeEEEECC-------CHHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHH
Confidence 345555553 788888773 2456888999999999998865421100 0 12389999
Q ss_pred HHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 196 DIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 196 ~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
++++.+++|||+.|||.|++++.+++ ..|||+|++||+++.+|+...
T Consensus 202 ~i~~~~~iPViaaGGI~~~~~~~~~l-~~GAd~V~vGs~~~~~~e~~~ 248 (369)
T 3bw2_A 202 QVREAVDIPVVAAGGIMRGGQIAAVL-AAGADAAQLGTAFLATDESGA 248 (369)
T ss_dssp HHHHHCSSCEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHTSTTCCC
T ss_pred HHHHhcCceEEEECCCCCHHHHHHHH-HcCCCEEEEChHHhCCcccCc
Confidence 99999999999999999999999999 589999999999999988744
No 45
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.81 E-value=1.4e-19 Score=169.92 Aligned_cols=191 Identities=17% Similarity=0.136 Sum_probs=138.5
Q ss_pred CCCCceEEccccCCCCHHHHHH-HHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLL-AAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~-~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
++++|+++|||+++|+..|+.. ++..|.+++.+++... . .++ ++...+.+.|+.+
T Consensus 44 ~l~~Pi~~a~mag~s~~~la~a~~~~gg~g~~~~~~~~~--~-------------~~~---------i~~~~~~g~~v~v 99 (336)
T 1ypf_A 44 KFKLPVVPANMQTIIDERIATYLAENNYFYIMHRFQPEK--R-------------ISF---------IRDMQSRGLIASI 99 (336)
T ss_dssp EESSSEEECSSTTTCCHHHHHHHHHTTCCCCCCCSSGGG--H-------------HHH---------HHHHHHTTCCCEE
T ss_pred EecCcEEECCCCCCChHHHHHHHHhCCCEEEecCCCCHH--H-------------HHH---------HHHHHhcCCeEEE
Confidence 4789999999999999999765 5445678888765421 0 001 1111223447899
Q ss_pred EECCCCHHHHHHHHHHhhcC--CCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHH
Q 020428 81 QMGTSDAVRALTAAKMVCKD--VAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQD 158 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~~--~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~ 158 (326)
|+ |.+++.+..+......+ ++.|++|++. | ++....++++++++.++.|+.+|-.. .
T Consensus 100 ~~-g~~~~~~~~a~~~~~~g~~~~~i~i~~~~----------G-----~~~~~~~~i~~lr~~~~~~~vi~G~v-----~ 158 (336)
T 1ypf_A 100 SV-GVKEDEYEFVQQLAAEHLTPEYITIDIAH----------G-----HSNAVINMIQHIKKHLPESFVIAGNV-----G 158 (336)
T ss_dssp EE-CCSHHHHHHHHHHHHTTCCCSEEEEECSS----------C-----CSHHHHHHHHHHHHHCTTSEEEEEEE-----C
T ss_pred eC-CCCHHHHHHHHHHHhcCCCCCEEEEECCC----------C-----CcHHHHHHHHHHHHhCCCCEEEECCc-----C
Confidence 96 67777776655555447 8999999742 2 67788899999999985444444211 2
Q ss_pred HHHHHHHHHHcCCcEEEE--eeccc----CCCCCCcC--CHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEE
Q 020428 159 TVELARRIEKTGVSALAV--HGRKV----ADRPRDPA--KWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~v--h~r~~----~~~~~~~~--~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vm 230 (326)
+.+.|+.+.++|+|+|++ |+++. ...+.+.+ .++.+.++++.+++|||++|||+|++|+.+++ ..|||+||
T Consensus 159 s~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kal-alGAdaV~ 237 (336)
T 1ypf_A 159 TPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSI-RFGATMVM 237 (336)
T ss_dssp SHHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHH-HTTCSEEE
T ss_pred CHHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH-HcCCCEEE
Confidence 357899999999999999 54321 11122333 68899999999999999999999999999999 58999999
Q ss_pred eccchhcC
Q 020428 231 AARGALWN 238 (326)
Q Consensus 231 iGr~~l~~ 238 (326)
+||+++..
T Consensus 238 iGr~~l~t 245 (336)
T 1ypf_A 238 IGSLFAGH 245 (336)
T ss_dssp ESGGGTTC
T ss_pred eChhhhcc
Confidence 99999953
No 46
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=99.79 E-value=4.3e-19 Score=157.49 Aligned_cols=182 Identities=13% Similarity=0.125 Sum_probs=131.1
Q ss_pred EEccccCCCCHHHHHHHH---HcCCCeE--EeCceec-ccccccccccccccCcccccccCCcceeeecccCCCCcEEEE
Q 020428 8 VLAPMVRVGTLPFRLLAA---QYGADIT--YGEEIID-HKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQ 81 (326)
Q Consensus 8 ilAPM~g~t~~~fr~~~~---~~G~~l~--~te~i~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQ 81 (326)
.|.|+ .|+.+||.+|+ +||++.+ +++|+.. ..... . .+ +.... +-|+++|
T Consensus 12 ~l~p~--~t~~~i~~l~~~a~~~g~~~v~v~~~~v~~~~~~l~-------~-----------v~-v~~v~---~~P~g~~ 67 (225)
T 1mzh_A 12 ALKPH--LSEKEIEEFVLKSEELGIYAVCVNPYHVKLASSIAK-------K-----------VK-VCCVI---GFPLGLN 67 (225)
T ss_dssp ECCTT--CCHHHHHHHHHHHHHTTCSEEEECGGGHHHHHHHCS-------S-----------SE-EEEEE---STTTCCS
T ss_pred ccCCC--CCHHHHHHHHHHHHHhCCeEEEECHHHHHHHHHHhc-------C-----------Cc-eeeEe---cCCCCcc
Confidence 47787 58999999999 6899874 4555543 11110 0 01 11111 2356666
Q ss_pred ECCCCHHHHHHHHHHhhcCCCEEE--EccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEe---cCCCCh
Q 020428 82 MGTSDAVRALTAAKMVCKDVAAID--INMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKI---RLLKSS 156 (326)
Q Consensus 82 l~g~~~~~~~~aa~~~~~~~d~id--lN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~---r~g~~~ 156 (326)
++++.+.... +.+..|+|+|| +|+||- + . .+++.+.+.++++++.++ |+.+|+ +.+++.
T Consensus 68 ~~~~k~~~~~---~A~~~Gad~Id~viN~g~~----~-~-------~~~~~~~~~i~~v~~a~~-pv~vKvi~e~~~l~~ 131 (225)
T 1mzh_A 68 KTSVKVKEAV---EAVRDGAQELDIVWNLSAF----K-S-------EKYDFVVEELKEIFRETP-SAVHKVIVETPYLNE 131 (225)
T ss_dssp CHHHHHHHHH---HHHHTTCSEEEEECCHHHH----H-T-------TCHHHHHHHHHHHHHTCT-TSEEEEECCGGGCCH
T ss_pred chhhhHHHHH---HHHHcCCCEEEEEecHHHH----h-c-------CChHHHHHHHHHHHHHhc-CceEEEEEeCCCCCH
Confidence 5544444332 22335999999 799981 1 1 245677788999999988 999999 667888
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
++..++++.++++|+|+| ++..+.+.+.++|+.++.+++.+ ++||+++|||+|++|+.+++ .+|||.|.++++
T Consensus 132 ~~~~~~a~~a~eaGad~I----~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l-~aGA~~iG~s~~ 206 (225)
T 1mzh_A 132 EEIKKAVEICIEAGADFI----KTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMI-EAGADRIGTSSG 206 (225)
T ss_dssp HHHHHHHHHHHHHTCSEE----ECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEESCH
T ss_pred HHHHHHHHHHHHhCCCEE----EECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHH-HhCchHHHHccH
Confidence 889999999999999999 22224445678999999999987 79999999999999999999 599997666654
No 47
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.79 E-value=5.5e-19 Score=167.22 Aligned_cols=206 Identities=15% Similarity=0.150 Sum_probs=142.0
Q ss_pred CCCCceEEccccCCCCHH------HHHHHHHcCCCeEEeCceec--ccccccccccccccCcccccccCCcceeeecccC
Q 020428 2 DYQNKLVLAPMVRVGTLP------FRLLAAQYGADITYGEEIID--HKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQ 73 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~------fr~~~~~~G~~l~~te~i~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (326)
+++.|+++|||.|.|+.+ ++.+|+++|+++..++|..+ ++..... | +.+.+..+
T Consensus 57 ~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s-----------~------~~vr~~ap- 118 (368)
T 3vkj_A 57 EISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARES-----------F------AIVRKVAP- 118 (368)
T ss_dssp EESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHH-----------H------HHHHHHCS-
T ss_pred eccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhh-----------H------HHHHHhCc-
Confidence 468899999999999877 59999999999999998654 2222111 0 00001112
Q ss_pred CCCcEEEEEC-----C-CCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChH-HHHHHHHHHhhcccCcE
Q 020428 74 ERNHVVFQMG-----T-SDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPE-LIHDILTMLKRNLDVPV 146 (326)
Q Consensus 74 ~~~p~~vQl~-----g-~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~-~~~~iv~~v~~~~~~pv 146 (326)
..|++.+++ + .+++.+.++++.+..++..|+||.. ..+.. ..|. .+.. ...++++++++.+++||
T Consensus 119 -~~~~~anlg~~ql~~~~~~~~~~~av~~~~a~al~Ihln~~---~~~~~-p~g~---~~~~~~~~~~i~~i~~~~~vPV 190 (368)
T 3vkj_A 119 -TIPIIANLGMPQLVKGYGLKEFQDAIQMIEADAIAVHLNPA---QEVFQ-PEGE---PEYQIYALEKLRDISKELSVPI 190 (368)
T ss_dssp -SSCEEEEEEGGGGGTTCCHHHHHHHHHHTTCSEEEEECCHH---HHHHS-SSCC---CBCBTHHHHHHHHHHTTCSSCE
T ss_pred -CcceecCcCeeecCCCCCHHHHHHHHHHhcCCCeEEEecch---hhhhC-CCCC---chhhHHHHHHHHHHHHHcCCCE
Confidence 235665543 4 7889999999988556666777733 22221 1111 1111 36778999999999999
Q ss_pred EEEecCCCChHHHHHHHHHHHHcCCcEEEEeeccc----------CC-------------CCCCcCCHHHHHHHHHhc-C
Q 020428 147 TCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKV----------AD-------------RPRDPAKWGEIADIVAAL-S 202 (326)
Q Consensus 147 ~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~----------~~-------------~~~~~~~~~~i~~i~~~~-~ 202 (326)
.+|. .|+.. +.+.|+.+.++|+|+|+|.|+.. .. ..-+.+....+.++++.+ +
T Consensus 191 ivK~-vG~g~--s~~~A~~l~~aGad~I~V~g~GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~~ 267 (368)
T 3vkj_A 191 IVKE-SGNGI--SMETAKLLYSYGIKNFDTSGQGGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVPD 267 (368)
T ss_dssp EEEC-SSSCC--CHHHHHHHHHTTCCEEECCCBTSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHSTT
T ss_pred EEEe-CCCCC--CHHHHHHHHhCCCCEEEEeCCCCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcCC
Confidence 9996 43321 24679999999999999955421 00 000233346778888887 4
Q ss_pred CcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 203 IPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 203 iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+|||++|||+|+.|+.+++ ..|||+||+||+++.
T Consensus 268 ipvia~GGI~~~~d~~kal-~lGA~~v~ig~~~l~ 301 (368)
T 3vkj_A 268 SFLVGSGGIRSGLDAAKAI-ALGADIAGMALPVLK 301 (368)
T ss_dssp CEEEEESSCCSHHHHHHHH-HHTCSEEEECHHHHH
T ss_pred CcEEEECCCCCHHHHHHHH-HcCCCEEEEcHHHHH
Confidence 9999999999999999999 589999999997764
No 48
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=99.76 E-value=8e-18 Score=161.81 Aligned_cols=218 Identities=18% Similarity=0.153 Sum_probs=141.3
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceeccccccccccccccc--------Ccc-----cccccCC----
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYI--------GST-----DFVEKGT---- 63 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~--------~~~-----~~~~~~~---- 63 (326)
++++||++|||++.++..++..+.+.|. +++. .+.+.+.+....+...... +.. .+.-...
T Consensus 40 ~l~~Pii~Apm~~~~~~ela~a~a~aGglg~i~-~~~s~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~~~ 118 (404)
T 1eep_A 40 SLNIPFLSSAMDTVTESQMAIAIAKEGGIGIIH-KNMSIEAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEK 118 (404)
T ss_dssp EESSSEEECCCTTTCSHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHTCC---------------------------
T ss_pred ccCCCEEeCCCCCCCCHHHHHHHHHCCCEEEEC-CCCCHHHHHHHHHHHHhhccCCCceeccccccccccccccCCCCCH
Confidence 5789999999999999999988888876 5554 4455554433221110000 000 0000000
Q ss_pred ----cce----eeec-cc--CCCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHH
Q 020428 64 ----DSV----VFRT-CH--QERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIH 132 (326)
Q Consensus 64 ----~~~----~~~~-~~--~~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~ 132 (326)
+.. .+.. .. ..+.++++++... ++....+...+..|+|.|+||+++ .+|+.+.
T Consensus 119 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~~-~~~~~~a~~~~~~G~d~i~i~~~~---------------g~~~~~~ 182 (404)
T 1eep_A 119 SDAYKNAEHKEDFPNACKDLNNKLRVGAAVSID-IDTIERVEELVKAHVDILVIDSAH---------------GHSTRII 182 (404)
T ss_dssp -----------CCTTCCBCTTSCBCCEEEECSC-TTHHHHHHHHHHTTCSEEEECCSC---------------CSSHHHH
T ss_pred HHHHHHHHHhhhcchhhhhcccCceEEEEeCCC-hhHHHHHHHHHHCCCCEEEEeCCC---------------CChHHHH
Confidence 000 0000 01 1123578888653 333344434444599999998754 1468889
Q ss_pred HHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEee------cccCCCCCCcCCHHHHHHHHH---hcC
Q 020428 133 DILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHG------RKVADRPRDPAKWGEIADIVA---ALS 202 (326)
Q Consensus 133 ~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~------r~~~~~~~~~~~~~~i~~i~~---~~~ 202 (326)
++++++++.+ ++||.++.- .+.+.++.++++|+|+|++.+ .+......+.++++.+..+++ .++
T Consensus 183 e~i~~ir~~~~~~pviv~~v------~~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ 256 (404)
T 1eep_A 183 ELIKKIKTKYPNLDLIAGNI------VTKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTN 256 (404)
T ss_dssp HHHHHHHHHCTTCEEEEEEE------CSHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHCCCCeEEEcCC------CcHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcC
Confidence 9999999988 899998532 235778999999999999921 111111123446777777766 468
Q ss_pred CcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 203 IPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 203 iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
+|||++|||.|++|+.+++ ..|||+|++||+++..|+...
T Consensus 257 ipVia~GGI~~~~d~~~al-a~GAd~V~iG~~~l~~~e~~~ 296 (404)
T 1eep_A 257 ICIIADGGIRFSGDVVKAI-AAGADSVMIGNLFAGTKESPS 296 (404)
T ss_dssp CEEEEESCCCSHHHHHHHH-HHTCSEEEECHHHHTBTTSSS
T ss_pred ceEEEECCCCCHHHHHHHH-HcCCCHHhhCHHHhcCCCCCc
Confidence 9999999999999999999 589999999999999877643
No 49
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=99.73 E-value=5.3e-17 Score=153.39 Aligned_cols=193 Identities=18% Similarity=0.143 Sum_probs=133.9
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHc-CCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQY-GADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~-G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
.++.|+++|||.++|+..+...+.+. |.+++... .+++..... +.+..+....|+++
T Consensus 43 ~l~~Pii~apM~~vt~~~lA~avA~~GGlgii~~~-~s~e~~~~~---------------------I~~vk~~~~~pvga 100 (361)
T 3khj_A 43 SLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHKN-MDMESQVNE---------------------VLKVKNSGGLRVGA 100 (361)
T ss_dssp EESSSEEECSSTTTCSHHHHHHHHHTTCEEEECSS-SCHHHHHHH---------------------HHHHHHTTCCCCEE
T ss_pred ccCCCEEeecCCCCCcHHHHHHHHHcCCCeEEecC-CCHHHHHHH---------------------HHHHHhccCceEEE
Confidence 46789999999999999999755555 45666532 222221110 00111223358999
Q ss_pred EECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHH
Q 020428 81 QMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~ 160 (326)
+++.++ ...+...++.|+|.|.||.+. .+++.+.+.++.+++.+++||.++.- .+.
T Consensus 101 ~ig~~~---~e~a~~l~eaGad~I~ld~a~---------------G~~~~~~~~i~~i~~~~~~~Vivg~v------~t~ 156 (361)
T 3khj_A 101 AIGVNE---IERAKLLVEAGVDVIVLDSAH---------------GHSLNIIRTLKEIKSKMNIDVIVGNV------VTE 156 (361)
T ss_dssp EECTTC---HHHHHHHHHTTCSEEEECCSC---------------CSBHHHHHHHHHHHHHCCCEEEEEEE------CSH
T ss_pred EeCCCH---HHHHHHHHHcCcCeEEEeCCC---------------CCcHHHHHHHHHHHHhcCCcEEEccC------CCH
Confidence 997666 222223334499999998652 14567788899998888999998542 345
Q ss_pred HHHHHHHHcCCcEEEEeec------ccCCCCCCcCCHHHHHHHHH---hcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 161 ELARRIEKTGVSALAVHGR------KVADRPRDPAKWGEIADIVA---ALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r------~~~~~~~~~~~~~~i~~i~~---~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+.++.+.++|+|+|.+... ++.....+.+++..+.++++ .+++|||+.|||.+++|+.+++ ..|||+||+
T Consensus 157 e~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kal-a~GAd~V~v 235 (361)
T 3khj_A 157 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKAL-AVGASSVMI 235 (361)
T ss_dssp HHHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHH-HHTCSEEEE
T ss_pred HHHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHH-HcCCCEEEE
Confidence 6789999999999999311 11111223456777777744 4689999999999999999999 589999999
Q ss_pred ccchhcCccc
Q 020428 232 ARGALWNASI 241 (326)
Q Consensus 232 Gr~~l~~P~l 241 (326)
||+++..+.-
T Consensus 236 Gs~~~~t~Es 245 (361)
T 3khj_A 236 GSILAGTEES 245 (361)
T ss_dssp STTTTTBTTS
T ss_pred ChhhhcCCcC
Confidence 9999986654
No 50
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.72 E-value=3.7e-17 Score=154.23 Aligned_cols=206 Identities=14% Similarity=0.125 Sum_probs=125.0
Q ss_pred CCCCceEEccccCCCCHH------HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCC
Q 020428 2 DYQNKLVLAPMVRVGTLP------FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQER 75 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~------fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (326)
+++.|+++|||+|.++.+ ++.+|+++|..+..+++...-.- ... ..| . +.+..| +
T Consensus 84 ~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~~le~--------~~~--~~~------~-v~r~~P--~ 144 (365)
T 3sr7_A 84 DFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYSTALKN--------PDD--TSY------Q-VKKSRP--H 144 (365)
T ss_dssp EESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------------------------------------
T ss_pred EccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccccccC--------ccc--cce------E-ehhhCC--C
Confidence 467899999999988754 99999999999988877652210 000 011 0 122222 3
Q ss_pred CcEEEEECCCC-HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 76 NHVVFQMGTSD-AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 76 ~p~~vQl~g~~-~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
.+++.+|.... .++..++++.+ ++|.+.||+...+..+... | ..+.+-..+.++++++.+++||.+|. .|+
T Consensus 145 ~~~ianig~~~~~e~~~~~ve~~--~adal~ihln~~qe~~~p~--G---d~~~~~~~~~I~~l~~~~~~PVivK~-vg~ 216 (365)
T 3sr7_A 145 LLLATNIGLDKPYQAGLQAVRDL--QPLFLQVHINLMQELLMPE--G---EREFRSWKKHLSDYAKKLQLPFILKE-VGF 216 (365)
T ss_dssp CCEEEEEETTSCHHHHHHHHHHH--CCSCEEEEECHHHHHTSSS--S---CCCCHHHHHHHHHHHHHCCSCEEEEE-CSS
T ss_pred CcEEEEeCCCCCHHHHHHHHHhc--CCCEEEEeccccccccCCC--C---CCcHHHHHHHHHHHHHhhCCCEEEEE-CCC
Confidence 57888997543 44455544443 6666666554222111111 1 12334467889999999999999994 332
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCC---------------CCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHH
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADR---------------PRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQ 218 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~---------------~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~ 218 (326)
. .+.+.|+.+.++|+|+|+|+|+...+. ..+.+..+.+..++... ++|||++|||+|+.|+.
T Consensus 217 g--~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~~~~~ipvia~GGI~~g~Dv~ 294 (365)
T 3sr7_A 217 G--MDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQPLMDKVEILASGGIRHPLDII 294 (365)
T ss_dssp C--CCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHHGGGTTTSEEEECSSCCSHHHHH
T ss_pred C--CCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHHHHhcCCCeEEEeCCCCCHHHHH
Confidence 2 234678999999999999977633211 11233346666654322 79999999999999999
Q ss_pred HHHHhcCCcEEEeccchhc
Q 020428 219 RIKTAAGASSVMAARGALW 237 (326)
Q Consensus 219 ~~l~~~Gad~VmiGr~~l~ 237 (326)
+++ ..|||+||+||+++.
T Consensus 295 KaL-alGAdaV~ig~~~l~ 312 (365)
T 3sr7_A 295 KAL-VLGAKAVGLSRTMLE 312 (365)
T ss_dssp HHH-HHTCSEEEESHHHHH
T ss_pred HHH-HcCCCEEEECHHHHH
Confidence 999 599999999998765
No 51
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=99.71 E-value=5.9e-18 Score=153.23 Aligned_cols=149 Identities=11% Similarity=0.135 Sum_probs=115.3
Q ss_pred cEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCC-----hHHHHHHHHHHh-hcccCcEEEEe
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSK-----PELIHDILTMLK-RNLDVPVTCKI 150 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~-----p~~~~~iv~~v~-~~~~~pv~vK~ 150 (326)
++-+|++|.-.. . ++.+++ .|++.|-+ |++++++ |+++.++++++. +.+-+++.+|.
T Consensus 76 ~~pv~vgGGir~-~-~~~~~l-~Ga~~Vii--------------gs~a~~~~g~~~p~~~~~~~~~~g~~~ivv~iD~k~ 138 (260)
T 2agk_A 76 PQFLQVGGGIND-T-NCLEWL-KWASKVIV--------------TSWLFTKEGHFQLKRLERLTELCGKDRIVVDLSCRK 138 (260)
T ss_dssp TTTSEEESSCCT-T-THHHHT-TTCSCEEE--------------CGGGBCTTCCBCHHHHHHHHHHHCGGGEEEEEEEEE
T ss_pred CceEEEeCCCCH-H-HHHHHh-cCCCEEEE--------------CcHHHhhcCCCCHHHHHHHHHHhCcCcEEEEEEeee
Confidence 445677766543 3 777777 88887654 5788888 999999999997 55445555553
Q ss_pred c---------CCCChH---HHH-HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc----CCcEEEeCCCCC
Q 020428 151 R---------LLKSSQ---DTV-ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL----SIPVIANGDVFE 213 (326)
Q Consensus 151 r---------~g~~~~---~~~-e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~----~iPVi~nGgI~s 213 (326)
+ .||... ++. ++++.++++ ++.|++|++++++.+.|+ ||++++++++.+ ++|||++|||.|
T Consensus 139 ~~~~g~~V~~~gw~~~t~~~~~~e~a~~~~~~-a~~il~t~i~~dG~~~G~-d~eli~~l~~~~~~~~~iPVIasGGi~s 216 (260)
T 2agk_A 139 TQDGRWIVAMNKWQTLTDLELNADTFRELRKY-TNEFLIHAADVEGLCGGI-DELLVSKLFEWTKDYDDLKIVYAGGAKS 216 (260)
T ss_dssp EETTEEEEEETTTTEEEEEEESHHHHHHHTTT-CSEEEEEC-------CCC-CHHHHHHHHHHHTTCSSCEEEEESCCCC
T ss_pred cCCCceEEEEcCCccccCccHHHHHHHHHHHh-cCEEEEEeeccccCcCCC-CHHHHHHHHHhhcccCCceEEEeCCCCC
Confidence 2 156532 557 999999999 999999999999998887 999999999999 999999999999
Q ss_pred HHHHHHHHHhc-CCcEEEeccch--hcCc-ccccc
Q 020428 214 YDDFQRIKTAA-GASSVMAARGA--LWNA-SIFSS 244 (326)
Q Consensus 214 ~~d~~~~l~~~-Gad~VmiGr~~--l~~P-~lf~~ 244 (326)
++|+.++++.+ |+++||+||++ +.+| |.|.+
T Consensus 217 ~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~ 251 (260)
T 2agk_A 217 VDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFED 251 (260)
T ss_dssp THHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHH
T ss_pred HHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHH
Confidence 99999999766 99999999997 8888 88765
No 52
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=99.71 E-value=9e-17 Score=150.45 Aligned_cols=206 Identities=18% Similarity=0.158 Sum_probs=148.8
Q ss_pred CCCceEEccccCCC------CHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCC
Q 020428 3 YQNKLVLAPMVRVG------TLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERN 76 (326)
Q Consensus 3 l~~~iilAPM~g~t------~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (326)
+.-|+++||++... +....+.|.+.|.-.+.+-+.+ .++. + +... ..+.
T Consensus 68 ~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss-~s~e---------------------~-v~~~--~~~~ 122 (352)
T 3sgz_A 68 ISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYAS-YSLE---------------------D-IVAA--APEG 122 (352)
T ss_dssp ESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCS-SCHH---------------------H-HHHH--STTC
T ss_pred cCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCC-CCHH---------------------H-HHHh--ccCc
Confidence 56799999987632 3456677777776555443221 1110 0 1111 1224
Q ss_pred cEEEEEC-CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccc----cccc-------------------ccc---ccCCh
Q 020428 77 HVVFQMG-TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSV----SGGM-------------------GAA---LLSKP 128 (326)
Q Consensus 77 p~~vQl~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~----~~~~-------------------G~~---l~~~p 128 (326)
|..+||. -.|.+...+..++++. |+..+=+....|..-.+ +.++ ++. -.-+|
T Consensus 123 ~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~ 202 (352)
T 3sgz_A 123 FRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFPKA 202 (352)
T ss_dssp EEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC---------------CCCT
T ss_pred cceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccccccchhhhhccCC
Confidence 7899995 4577777777788876 99988888887764221 0010 111 12356
Q ss_pred HHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEE
Q 020428 129 ELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVI 206 (326)
Q Consensus 129 ~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi 206 (326)
.+.-+.++.+++.+++||.+|... +.+.|+.+.++|+|+|+|++....+.+.+++.++.+.++++.+ ++|||
T Consensus 203 ~~~w~~i~~lr~~~~~PvivK~v~------~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVi 276 (352)
T 3sgz_A 203 SFCWNDLSLLQSITRLPIILKGIL------TKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVY 276 (352)
T ss_dssp TCCHHHHHHHHHHCCSCEEEEEEC------SHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEE
T ss_pred CCCHHHHHHHHHhcCCCEEEEecC------cHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEE
Confidence 677788999999999999999863 3467899999999999997766556666788999999999888 79999
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
++|||+|++|+.+++ ..|||+|||||+++..+.
T Consensus 277 a~GGI~~g~Dv~kaL-alGA~aV~iGr~~l~~l~ 309 (352)
T 3sgz_A 277 MDGGVRTGTDVLKAL-ALGARCIFLGRPILWGLA 309 (352)
T ss_dssp EESSCCSHHHHHHHH-HTTCSEEEESHHHHHHHH
T ss_pred EECCCCCHHHHHHHH-HcCCCEEEECHHHHHHHH
Confidence 999999999999999 589999999998886544
No 53
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.69 E-value=4.9e-16 Score=146.04 Aligned_cols=188 Identities=14% Similarity=0.074 Sum_probs=128.8
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQ 81 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQ 81 (326)
+++.||++|||..+|+..++..+.+.|.-.+.+.+.+.+.+.... ......+...
T Consensus 40 ~l~~Pii~ApM~~vte~~lA~A~a~~Gg~gvi~~~~s~ee~~~~i-------------------------~~~~~~~~~~ 94 (361)
T 3r2g_A 40 TLNLPVISANMDTITESNMANFMHSKGAMGALHRFMTIEENIQEF-------------------------KKCKGPVFVS 94 (361)
T ss_dssp EESSCEEECCSTTTCSHHHHHHHHHTTCEEBCCSCSCHHHHHHHH-------------------------HTCCSCCBEE
T ss_pred EcCCCEEECCCCCchHHHHHHHHHHcCCCEEEeCCCCHHHHHHHH-------------------------hhcceEEEEE
Confidence 468899999999999999999999998644444444443332211 1111123333
Q ss_pred ECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHH
Q 020428 82 MGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDT 159 (326)
Q Consensus 82 l~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~ 159 (326)
+ |.. +...+.++.+.+ |+|.|.++..+.. ++.+.++++.+++.+ ++||.+|.- .+
T Consensus 95 ~-g~~-~~~~e~~~~a~~aGvdvI~id~a~G~---------------~~~~~e~I~~ir~~~~~~~Vi~G~V------~T 151 (361)
T 3r2g_A 95 V-GCT-ENELQRAEALRDAGADFFCVDVAHAH---------------AKYVGKTLKSLRQLLGSRCIMAGNV------AT 151 (361)
T ss_dssp E-CSS-HHHHHHHHHHHHTTCCEEEEECSCCS---------------SHHHHHHHHHHHHHHTTCEEEEEEE------CS
T ss_pred c-CCC-HHHHHHHHHHHHcCCCEEEEeCCCCC---------------cHhHHHHHHHHHHhcCCCeEEEcCc------CC
Confidence 3 233 344445555544 9999999765432 245678899999886 789999732 23
Q ss_pred HHHHHHHHHcCCcEEEEe--e-cccC---CCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 160 VELARRIEKTGVSALAVH--G-RKVA---DRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh--~-r~~~---~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
.+.++.+.++|+|+|.|. + +... ....+.+.++.+.++++... |||+.|||.+++|+.+++ ..|||+||+||
T Consensus 152 ~e~A~~a~~aGaD~I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kAL-a~GAd~V~iGr 229 (361)
T 3r2g_A 152 YAGADYLASCGADIIKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKAL-AFGADFVMIGG 229 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHH-HTTCSEEEESG
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHH-HcCCCEEEECh
Confidence 566899999999999983 2 1100 00113346777777766555 999999999999999999 58999999999
Q ss_pred chhcCc
Q 020428 234 GALWNA 239 (326)
Q Consensus 234 ~~l~~P 239 (326)
+++...
T Consensus 230 ~f~~t~ 235 (361)
T 3r2g_A 230 MLAGSA 235 (361)
T ss_dssp GGTTBT
T ss_pred HHhCCc
Confidence 999764
No 54
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=99.68 E-value=3.8e-16 Score=139.75 Aligned_cols=152 Identities=19% Similarity=0.256 Sum_probs=122.7
Q ss_pred CCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc----cCc----
Q 020428 74 ERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL----DVP---- 145 (326)
Q Consensus 74 ~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~----~~p---- 145 (326)
.+.|+.+..+-.++++...+ +..|+|.|-++ +.++.+|+.+.++++.+...+ +.+
T Consensus 73 ~~ipv~v~ggi~~~~~~~~~---l~~Gad~V~lg--------------~~~l~~p~~~~~~~~~~g~~~~~~ld~~~~~~ 135 (244)
T 2y88_A 73 LDVQVELSGGIRDDESLAAA---LATGCARVNVG--------------TAALENPQWCARVIGEHGDQVAVGLDVQIIDG 135 (244)
T ss_dssp CSSEEEEESSCCSHHHHHHH---HHTTCSEEEEC--------------HHHHHCHHHHHHHHHHHGGGEEEEEEEEEETT
T ss_pred cCCcEEEECCCCCHHHHHHH---HHcCCCEEEEC--------------chHhhChHHHHHHHHHcCCCEEEEEeccccCC
Confidence 34688887777888864433 33588988763 566788999999999876443 222
Q ss_pred -EEEEecCCCCh--HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHH
Q 020428 146 -VTCKIRLLKSS--QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKT 222 (326)
Q Consensus 146 -v~vK~r~g~~~--~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~ 222 (326)
.+||+| +|.. .++.++++.+++.|++.|.+|+|++.+.+.++ +|+.++++++.+++|||++|||.+++|+.++++
T Consensus 136 ~~~v~~~-g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~-~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~ 213 (244)
T 2y88_A 136 EHRLRGR-GWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGP-NLDLLAGVADRTDAPVIASGGVSSLDDLRAIAT 213 (244)
T ss_dssp EEEEEEG-GGTEEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCC-CHHHHHHHHTTCSSCEEEESCCCSHHHHHHHHT
T ss_pred CCEEEEC-CccCCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCC-CHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHh
Confidence 357777 6532 26789999999999999999999998877665 999999999999999999999999999999995
Q ss_pred hc--CCcEEEeccchhcCcccccc
Q 020428 223 AA--GASSVMAARGALWNASIFSS 244 (326)
Q Consensus 223 ~~--Gad~VmiGr~~l~~P~lf~~ 244 (326)
.+ |||+||+||+++.+|+.|.+
T Consensus 214 ~~~~Gad~v~vG~al~~~~~~~~~ 237 (244)
T 2y88_A 214 LTHRGVEGAIVGKALYARRFTLPQ 237 (244)
T ss_dssp TGGGTEEEEEECHHHHTTSSCHHH
T ss_pred hccCCCCEEEEcHHHHCCCcCHHH
Confidence 44 99999999999999998765
No 55
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=99.66 E-value=2.5e-16 Score=156.89 Aligned_cols=166 Identities=14% Similarity=0.016 Sum_probs=127.1
Q ss_pred cEEEEECCCCHH--H--------HHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhh-cccCc
Q 020428 77 HVVFQMGTSDAV--R--------ALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKR-NLDVP 145 (326)
Q Consensus 77 p~~vQl~g~~~~--~--------~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~-~~~~p 145 (326)
++-+|++|.-.+ + +..+.+.+..|+|.|.||.+| ..+..+-..++..+.+|+++.++.+..-+ .+-+.
T Consensus 327 ~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGad~V~igt~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~ 405 (555)
T 1jvn_A 327 FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDA-VYAAEKYYELGNRGDGTSPIETISKAYGAQAVVIS 405 (555)
T ss_dssp CSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTCSEEEECHHH-HHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEE
T ss_pred CCcEEEeCccccchhcccccchHHHHHHHHHHcCCCEEEECCHH-hhCchhhccccccccCHHHHHHHHHHhCCCcEEEE
Confidence 455777664321 1 233444455599999999988 33222223345578899999999998753 33222
Q ss_pred EEEEe--------------------------------cCCCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCC
Q 020428 146 VTCKI--------------------------------RLLKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAK 190 (326)
Q Consensus 146 v~vK~--------------------------------r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~ 190 (326)
+.+|. ..||+. .++.++++.++++|++.|++|++++++.+.|+ |
T Consensus 406 iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~-d 484 (555)
T 1jvn_A 406 VDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGY-D 484 (555)
T ss_dssp ECEEEEEESSGGGCSSCCEECSSCCTTCCCEEEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEECCGGGTTTCSCC-C
T ss_pred EEccccccccccccccccccccccCCCCCcceeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCC-C
Confidence 33331 125543 35789999999999999999999999998775 9
Q ss_pred HHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 191 WGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 191 ~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
|++++++++.+++|||++|||.|++|+.++++.+||++||+||+++.++|.|.+
T Consensus 485 ~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e 538 (555)
T 1jvn_A 485 LELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVND 538 (555)
T ss_dssp HHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHH
T ss_pred HHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHH
Confidence 999999999999999999999999999999966899999999999999998875
No 56
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=99.64 E-value=6.3e-15 Score=140.38 Aligned_cols=213 Identities=17% Similarity=0.157 Sum_probs=132.1
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccC---------cccccccC-C---ccee
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIG---------STDFVEKG-T---DSVV 67 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~---------~~~~~~~~-~---~~~~ 67 (326)
.++.|||+|||.++|+..+...+.+.|. |.+.. +.+++.+...-+....... ..++.+.. + .+.+
T Consensus 40 ~l~~PIi~a~M~~Vs~~~lA~Ava~aGGlGvi~~-~~~~e~~~~~i~~vk~~~~g~~~~P~~~~~nL~~~~~~~~~~~~~ 118 (400)
T 3ffs_A 40 SLKIPLISSAMDTVTEHLMAVGMARLGGIGIIHK-NMDMESQVNEVLKVKNWISNLEKNESTPDQNLDKESTDGKDTKSN 118 (400)
T ss_dssp EESSSEEECSCTTTCSSHHHHHHHTTTCEEEECS-SSCHHHHHHHHHHHHCCC---------------------------
T ss_pred CCCCCEEeCCCCCcCcHHHHHHHHHCCCEEEeCC-CCCHHHHHHHHHHHHhhccCcccCCCCccccccCCCCCHHHHHHH
Confidence 4688999999999999999999889875 66653 5555444322111100000 00000000 0 0000
Q ss_pred e--eccc----CCCC--cEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHh
Q 020428 68 F--RTCH----QERN--HVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLK 139 (326)
Q Consensus 68 ~--~~~~----~~~~--p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~ 139 (326)
. ...+ ++.. .+.+-+...+ ...+...+..|+|.|.++.+. .+++.+.++++.++
T Consensus 119 ~~~~~~p~~~~d~~g~l~v~~~v~~~~---~e~~~~lveaGvdvIvldta~---------------G~~~~~~e~I~~ik 180 (400)
T 3ffs_A 119 NNIDAYSNENLDNKGRLRVGAAIGVNE---IERAKLLVEAGVDVIVLDSAH---------------GHSLNIIRTLKEIK 180 (400)
T ss_dssp ----CCTTCCBCTTSSBCCEEEECCC----CHHHHHHHHHTCSEEEECCSC---------------CSBHHHHHHHHHHH
T ss_pred HHhhhCcchhhccccceeEEeecCCCH---HHHHHHHHHcCCCEEEEeCCC---------------CCcccHHHHHHHHH
Confidence 0 0000 1111 2233333333 223333344499999886431 13566778899998
Q ss_pred hcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEee------cccCCCCCCcCCHHHHHHHHHh---cCCcEEEeCC
Q 020428 140 RNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHG------RKVADRPRDPAKWGEIADIVAA---LSIPVIANGD 210 (326)
Q Consensus 140 ~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~------r~~~~~~~~~~~~~~i~~i~~~---~~iPVi~nGg 210 (326)
+.+++||.++.- .+.+.++.+.++|+|+|.+.. .++.....+.+++..+.++++. +++|||+.||
T Consensus 181 ~~~~i~Vi~g~V------~t~e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GG 254 (400)
T 3ffs_A 181 SKMNIDVIVGNV------VTEEATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGG 254 (400)
T ss_dssp TTCCCEEEEEEE------CSHHHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESC
T ss_pred hcCCCeEEEeec------CCHHHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCC
Confidence 888899988532 346778999999999999931 1222222345678888888764 5899999999
Q ss_pred CCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 211 VFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 211 I~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
|.+.+|+.+++ ..|||+||+||+++..+.
T Consensus 255 I~~~~di~kal-alGAd~V~vGt~f~~t~E 283 (400)
T 3ffs_A 255 IRYSGDIGKAL-AVGASSVMIGSILAGTEE 283 (400)
T ss_dssp CCSHHHHHHHH-TTTCSEEEECGGGTTBTT
T ss_pred CCCHHHHHHHH-HcCCCEEEEChHHhcCCC
Confidence 99999999999 689999999999997543
No 57
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.63 E-value=6.7e-16 Score=147.86 Aligned_cols=218 Identities=15% Similarity=0.135 Sum_probs=136.2
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceeccc---------ccccccccccc--cCccc--cccc-C---C
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHK---------LLKCERRVNEY--IGSTD--FVEK-G---T 63 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~---------l~~~~~~~~~~--~~~~~--~~~~-~---~ 63 (326)
++++|+++|||+++++..+...+.+.|. +++.|||+.... +.......+.. .+.+. +..+ . .
T Consensus 65 ~l~~Pii~Apm~g~~~~~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~~d~~~g~~~~~q~~~~~~d~~~~ 144 (393)
T 2qr6_A 65 KFDLPFMNHPSDALASPEFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEEGDQAAATRTLQELHAAPLDTELL 144 (393)
T ss_dssp EESSSEEECCCTTTCCHHHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred ccCCCeEeCCCCCcccHHHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHhcCCCccchhhhhcccccCCHHHH
Confidence 4789999999999999999999999885 888887743321 11000000000 00000 0000 0 0
Q ss_pred cceeeecccCCCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhccc
Q 020428 64 DSVVFRTCHQERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLD 143 (326)
Q Consensus 64 ~~~~~~~~~~~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~ 143 (326)
.+ +++...+.+.|+++.+.+.+..+..+.+. ..++|.+.++ +.|.. .+++. ++...+-+..+++.++
T Consensus 145 ~~-~i~~~~~~g~~v~~~v~~~~~~e~a~~~~--~agad~i~i~-~~~~~----~~~~~-----~~~~~~~i~~l~~~~~ 211 (393)
T 2qr6_A 145 SE-RIAQVRDSGEIVAVRVSPQNVREIAPIVI--KAGADLLVIQ-GTLIS----AEHVN-----TGGEALNLKEFIGSLD 211 (393)
T ss_dssp HH-HHHHHHHTTSCCEEEECTTTHHHHHHHHH--HTTCSEEEEE-CSSCC----SSCCC-----C-----CHHHHHHHCS
T ss_pred HH-HHHHHhhcCCeEEEEeCCccHHHHHHHHH--HCCCCEEEEe-CCccc----cccCC-----CcccHHHHHHHHHhcC
Confidence 01 12222334668888888766554443332 2388999887 33321 11211 1111112556677779
Q ss_pred CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeeccc----CCCCCCcCCHHHHHHHHHh-------cC---CcEEEeC
Q 020428 144 VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKV----ADRPRDPAKWGEIADIVAA-------LS---IPVIANG 209 (326)
Q Consensus 144 ~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~----~~~~~~~~~~~~i~~i~~~-------~~---iPVi~nG 209 (326)
+||.+|.- .+ .+.++.+.++|+|+|.| ++.. .....+++.++.+.++++. ++ +|||++|
T Consensus 212 ~pvi~ggi--~t----~e~a~~~~~~Gad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G 284 (393)
T 2qr6_A 212 VPVIAGGV--ND----YTTALHMMRTGAVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADG 284 (393)
T ss_dssp SCEEEECC--CS----HHHHHHHHTTTCSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS
T ss_pred CCEEECCc--CC----HHHHHHHHHcCCCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEEC
Confidence 99999742 23 34578888999999999 4411 1112356778888888776 54 9999999
Q ss_pred CCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 210 DVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 210 gI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
||+|.+|+.+++ ..|||+||+||+++..+.
T Consensus 285 GI~~~~dv~kal-alGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 285 SIENSGDVVKAI-ACGADAVVLGSPLARAEE 314 (393)
T ss_dssp SCCSHHHHHHHH-HHTCSEEEECGGGGGSTT
T ss_pred CCCCHHHHHHHH-HcCCCEEEECHHHHcCCC
Confidence 999999999999 589999999999998765
No 58
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=99.62 E-value=2.1e-15 Score=142.36 Aligned_cols=192 Identities=20% Similarity=0.147 Sum_probs=127.2
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
.++.||++|||.++|+..+...+.+.|. +++...+ +++.+... ++...+. .++.+
T Consensus 44 ~l~~Pii~apM~~vs~~~lA~avA~aGGlg~i~~~~-s~e~~~~~----------------------i~~vk~~-~~l~v 99 (366)
T 4fo4_A 44 ALNIPMVSASMDTVTEARLAIALAQEGGIGFIHKNM-SIEQQAAQ----------------------VHQVKIS-GGLRV 99 (366)
T ss_dssp EESSSEEECCCTTTCSHHHHHHHHHTTCEEEECSSS-CHHHHHHH----------------------HHHHHTT-TSCCC
T ss_pred ccCCCEEeCCCCCCChHHHHHHHHHcCCceEeecCC-CHHHHHHH----------------------HHHHHhc-CceeE
Confidence 4678999999999999999977777654 5554322 22221110 1111111 13344
Q ss_pred EEC-CCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHH
Q 020428 81 QMG-TSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQD 158 (326)
Q Consensus 81 Ql~-g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~ 158 (326)
++. +.+++...++...++.|+|.|.||... | +++.+.+.++.+++.. ++||.+..- .
T Consensus 100 ga~vg~~~~~~~~~~~lieaGvd~I~idta~----------G-----~~~~~~~~I~~ik~~~p~v~Vi~G~v------~ 158 (366)
T 4fo4_A 100 GAAVGAAPGNEERVKALVEAGVDVLLIDSSH----------G-----HSEGVLQRIRETRAAYPHLEIIGGNV------A 158 (366)
T ss_dssp EEECCSCTTCHHHHHHHHHTTCSEEEEECSC----------T-----TSHHHHHHHHHHHHHCTTCEEEEEEE------C
T ss_pred EEEeccChhHHHHHHHHHhCCCCEEEEeCCC----------C-----CCHHHHHHHHHHHHhcCCCceEeeee------C
Confidence 432 333333333333444599999997521 1 3456778888998887 788877531 3
Q ss_pred HHHHHHHHHHcCCcEEEEeecccC-------CCCCCcCCHHHHHHHHH---hcCCcEEEeCCCCCHHHHHHHHHhcCCcE
Q 020428 159 TVELARRIEKTGVSALAVHGRKVA-------DRPRDPAKWGEIADIVA---ALSIPVIANGDVFEYDDFQRIKTAAGASS 228 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r~~~-------~~~~~~~~~~~i~~i~~---~~~iPVi~nGgI~s~~d~~~~l~~~Gad~ 228 (326)
+.+.++.+.++|+|+|.+ |.... ....+.+.+..+.++++ .+++|||+.|||.+++|+.+++ ..|||+
T Consensus 159 t~e~A~~a~~aGAD~I~v-G~gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kal-a~GAd~ 236 (366)
T 4fo4_A 159 TAEGARALIEAGVSAVKV-GIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-AAGASC 236 (366)
T ss_dssp SHHHHHHHHHHTCSEEEE-CSSCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSE
T ss_pred CHHHHHHHHHcCCCEEEE-ecCCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHH-HcCCCE
Confidence 456788999999999999 32111 11124456777777765 5689999999999999999999 589999
Q ss_pred EEeccchhcCcc
Q 020428 229 VMAARGALWNAS 240 (326)
Q Consensus 229 VmiGr~~l~~P~ 240 (326)
||+|+.++..+.
T Consensus 237 V~vGs~f~~t~E 248 (366)
T 4fo4_A 237 VMVGSMFAGTEE 248 (366)
T ss_dssp EEESTTTTTBTT
T ss_pred EEEChHhhcCCC
Confidence 999999997554
No 59
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=99.61 E-value=6.6e-15 Score=131.76 Aligned_cols=153 Identities=19% Similarity=0.275 Sum_probs=114.5
Q ss_pred CCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEE---e
Q 020428 74 ERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCK---I 150 (326)
Q Consensus 74 ~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK---~ 150 (326)
.+.|+.+..+-.++++...+ +..|+|.|-+ |+.++.+|+.+.++++.....+.+.++++ +
T Consensus 74 ~~ipv~v~ggI~~~~~~~~~---l~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~~~~l~~~~g~v 136 (244)
T 1vzw_A 74 MDIKVELSGGIRDDDTLAAA---LATGCTRVNL--------------GTAALETPEWVAKVIAEHGDKIAVGLDVRGTTL 136 (244)
T ss_dssp CSSEEEEESSCCSHHHHHHH---HHTTCSEEEE--------------CHHHHHCHHHHHHHHHHHGGGEEEEEEEETTEE
T ss_pred cCCcEEEECCcCCHHHHHHH---HHcCCCEEEE--------------CchHhhCHHHHHHHHHHcCCcEEEEEEccCCEE
Confidence 35688887777888864433 3348888876 35667889999999888765444445444 1
Q ss_pred -cCCCCh--HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc--C
Q 020428 151 -RLLKSS--QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA--G 225 (326)
Q Consensus 151 -r~g~~~--~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~--G 225 (326)
+.+|.. .++.++++.+++.|++.|.+|++++.+.+.++ +|+.++++++.+++||+++|||.+++|+.++++.+ |
T Consensus 137 ~~~g~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~-~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~G 215 (244)
T 1vzw_A 137 RGRGWTRDGGDLYETLDRLNKEGCARYVVTDIAKDGTLQGP-NLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAG 215 (244)
T ss_dssp CCSSSCCCCCBHHHHHHHHHHTTCCCEEEEEC-------CC-CHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGT
T ss_pred EEcCcccCCCCHHHHHHHHHhCCCCEEEEeccCcccccCCC-CHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCC
Confidence 124532 26788999999999999999999888766554 99999999999999999999999999999999534 9
Q ss_pred CcEEEeccchhcCcccccc
Q 020428 226 ASSVMAARGALWNASIFSS 244 (326)
Q Consensus 226 ad~VmiGr~~l~~P~lf~~ 244 (326)
||+|++||+++.+||.|.+
T Consensus 216 adgv~vG~al~~~~~~~~~ 234 (244)
T 1vzw_A 216 VEGAIVGKALYAKAFTLEE 234 (244)
T ss_dssp EEEEEECHHHHTTSSCHHH
T ss_pred CceeeeeHHHHcCCCCHHH
Confidence 9999999999999987654
No 60
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=1.3e-15 Score=139.65 Aligned_cols=140 Identities=21% Similarity=0.303 Sum_probs=104.8
Q ss_pred HHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChH------------
Q 020428 91 LTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQ------------ 157 (326)
Q Consensus 91 ~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~------------ 157 (326)
.+.|+.+++ |+++|... ||+|+..+...|+++|++|+.+.+|. +++++||+.|.|+||..+
T Consensus 27 ~e~A~~ae~aGA~aI~~l--~~v~~d~~~~~G~arm~~p~~i~~I~----~av~iPV~~K~rig~~~e~qilea~GaD~I 100 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMAL--ERVPADIRAAGGVARMSDPALIEEIM----DAVSIPVMAKCRIGHTTEALVLEAIGVDMI 100 (330)
T ss_dssp HHHHHHHHHHTCSEEEEC--SSCHHHHC--CCCCCCCCHHHHHHHH----HHCSSCEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEec--CCccccccCCcchhhcCCHHHHHHHH----HhcCCCeEEEEeecchHHHHHHHHcCCCEE
Confidence 345555555 89999432 39999999999999999999988875 456899999999987210
Q ss_pred -----------------------------HHHHHHHHHHHcCCcEEEEee--------------cc------------cC
Q 020428 158 -----------------------------DTVELARRIEKTGVSALAVHG--------------RK------------VA 182 (326)
Q Consensus 158 -----------------------------~~~e~a~~l~~~G~d~i~vh~--------------r~------------~~ 182 (326)
+..|.++.+ +.|+++|.+|| |+ ..
T Consensus 101 d~s~~l~p~d~~~~i~k~~~~~~~~~~a~~lgea~r~~-~~Ga~~i~t~ge~g~~~~ve~v~H~r~~~~~~~~~s~~~~~ 179 (330)
T 2yzr_A 101 DESEVLTQADPFFHIYKKKFNVPFVCGARNLGEAVRRI-WEGAAMIRTKGEAGTGNIVEAVRHMRLMNEAIAQLQRMTDE 179 (330)
T ss_dssp EEETTSCCSCSSCCCCGGGCSSCEEEECSSHHHHHHHH-HHTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHTTSCHH
T ss_pred ehhccCCHHHHHHHhhhhhcccchhhccccHHHHHHHH-hcCcceeeccCCCCcccchhHHHHHHHHHHHHHHhccCCHH
Confidence 245556666 77888888888 54 11
Q ss_pred CCCC----CcCCH-------------------------------------HHHHHHHHhcCCcE--EEeCCCCCHHHHHH
Q 020428 183 DRPR----DPAKW-------------------------------------GEIADIVAALSIPV--IANGDVFEYDDFQR 219 (326)
Q Consensus 183 ~~~~----~~~~~-------------------------------------~~i~~i~~~~~iPV--i~nGgI~s~~d~~~ 219 (326)
+.+. ..++| ++++++++..++|| |++|||.|++|+.+
T Consensus 180 El~~~A~~~gadyv~~~~~vt~~~G~~~r~Lg~G~Vf~T~TK~~~~~~~lell~~i~~~~~IPVV~VAeGGI~Tpeda~~ 259 (330)
T 2yzr_A 180 EVYGVAKFYANRYAELAKTVREGMGLPATVLENEPIYEGFTLAEIIDGLYEVLLEVKKLGRLPVVNFAAGGVATPADAAL 259 (330)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHTTSCSCCCTTSEEETTEEHHHHHHHHHHHHHHHHHHTSCSSEEEECSCCCSHHHHHH
T ss_pred HHHHHHHHcCCCEeecccchhhhccccccccccccccCCCcccCCCcchHHHHHHHHHhCCCCeEEEEECCCCCHHHHHH
Confidence 1111 12334 88899998889999 69999999999999
Q ss_pred HHHhcCCcEEEeccchhcC
Q 020428 220 IKTAAGASSVMAARGALWN 238 (326)
Q Consensus 220 ~l~~~Gad~VmiGr~~l~~ 238 (326)
+++ .|||+|+|||+++..
T Consensus 260 ~l~-~GaDgV~VGsaI~~a 277 (330)
T 2yzr_A 260 MMQ-LGSDGVFVGSGIFKS 277 (330)
T ss_dssp HHH-TTCSCEEESHHHHTS
T ss_pred HHH-cCcCEEeeHHHHhcC
Confidence 994 799999999998853
No 61
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=99.59 E-value=3.1e-14 Score=127.05 Aligned_cols=145 Identities=19% Similarity=0.236 Sum_probs=109.5
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKS 155 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~ 155 (326)
-++..+ .+++ .|+++++ |+..|-...+||.... ...|.+-|.+|+.+. ++++++++||..|.|.|.
T Consensus 13 ~vimdv--~~~e----qa~iae~aGa~av~~l~~~p~d~r--~~gGv~Rm~dp~~I~----~I~~aVsIPVm~k~righ- 79 (291)
T 3o07_A 13 GVIMDV--VTPE----QAKIAEKSGACAVMALESIPADMR--KSGKVCRMSDPKMIK----DIMNSVSIPVMAKVRIGH- 79 (291)
T ss_dssp CEEEEE--SSHH----HHHHHHHHTCSEEEECSSCHHHHH--TTTCCCCCCCHHHHH----HHHTTCSSCEEEEEETTC-
T ss_pred Ceeeec--CCHH----HHHHHHHhCchhhhhccCCCchhh--hcCCccccCCHHHHH----HHHHhCCCCeEEEEecCc-
Confidence 366665 3333 3445555 9999999999998743 334788999998755 457788999999999976
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeec-----------------------------------------ccCC-----------
Q 020428 156 SQDTVELARRIEKTGVSALAVHGR-----------------------------------------KVAD----------- 183 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r-----------------------------------------~~~~----------- 183 (326)
...++.++++|+|.|.-+.+ |+..
T Consensus 80 ----~~EAqilea~GaD~IDesevltpad~~~~I~k~~f~vpfv~~~~~l~EAlrri~eGA~mIrTtge~gtg~v~~av~ 155 (291)
T 3o07_A 80 ----FVEAQIIEALEVDYIDESEVLTPADWTHHIEKDKFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVK 155 (291)
T ss_dssp ----HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHHTCSEEEECCCTTSCCTHHHHH
T ss_pred ----HHHHHHHHHcCCCEEecccCCCHHHHHHHhhhhcCCCcEEeeCCCHHHHHHHHHCCCCEEEecCcCCCccHHHHHH
Confidence 45578888888888864321 1000
Q ss_pred -------------CC-C----------CcCCHHHHHHHHHhcCCcE--EEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 184 -------------RP-R----------DPAKWGEIADIVAALSIPV--IANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 184 -------------~~-~----------~~~~~~~i~~i~~~~~iPV--i~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
.+ . ..++|++++++++.+++|| |+||||.|++|+.+++ ++|||+||||||++.
T Consensus 156 h~r~~~~~i~~l~g~~t~~el~~~a~~~~ad~elI~~Ike~~~IPVV~IAnGGI~TpedA~~~l-e~GaDGVmVGrAI~~ 234 (291)
T 3o07_A 156 HIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAGGVATPADAALLM-QLGCDGVFVGSGIFK 234 (291)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHHTSCSSCEEBCSSCCSHHHHHHHH-HTTCSCEEECGGGGG
T ss_pred HHHHHHHHHHHHHcCCCHHHhhhcccccCCCHHHHHHHHHccCCCEEEecCCCCCCHHHHHHHH-HhCCCEEEEchHHhC
Confidence 12 1 1578999999999999998 5799999999999999 799999999999887
Q ss_pred Cc
Q 020428 238 NA 239 (326)
Q Consensus 238 ~P 239 (326)
.+
T Consensus 235 s~ 236 (291)
T 3o07_A 235 SS 236 (291)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 62
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.58 E-value=5.3e-16 Score=139.30 Aligned_cols=153 Identities=16% Similarity=0.173 Sum_probs=34.4
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHh-hcccCcEE----
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLK-RNLDVPVT---- 147 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~-~~~~~pv~---- 147 (326)
..+.|+++.=+-.+++++.++. ..|+|+|-| |+.++.+|+++.++.+.+- +.+-+.++
T Consensus 77 ~~~ipvi~~Ggi~~~~~~~~~l---~~Gad~V~i--------------g~~~l~dp~~~~~~~~~~g~~~iv~~ld~~~~ 139 (247)
T 3tdn_A 77 LTTLPIIASGGAGKMEHFLEAF---LRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRV 139 (247)
T ss_dssp GCCSCEEEESCCCSHHHHHHHH---HTTCSEECC--------------SHHHHHCTHHHHHHHHHHC-------------
T ss_pred hCCCCEEEeCCCCCHHHHHHHH---HcCCCeeeh--------------hhHHhhChHHHHHHHHHhCCCcEEEEEEeccC
Confidence 3356777754446777755543 348888764 5677889999999888773 33222333
Q ss_pred -----EEecCCCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHH
Q 020428 148 -----CKIRLLKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQR 219 (326)
Q Consensus 148 -----vK~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~ 219 (326)
|+++ ||.. .+..++++.+++.|++.|.+|++++.+.+.+ .+++.++++++.+++|||++|||.|++|+.+
T Consensus 140 ~~~~~v~~~-g~~~~~~~~~~~~a~~~~~~G~~~i~~t~~~~~g~~~g-~~~~~~~~i~~~~~iPvia~GGI~~~~d~~~ 217 (247)
T 3tdn_A 140 DGEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSG-YDTEMIRFVRPLTTLPIIASGGAGKMEHFLE 217 (247)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCEEEEEC-CCcccCCCCHHHHHHHHHhcCCCEEEEecccCCCCcCC-CCHHHHHHHHHhCCCCEEEECCCCCHHHHHH
Confidence 3343 4542 4678899999999999999999988876655 5899999999999999999999999999999
Q ss_pred HHHhcCCcEEEeccchhcCccccccc
Q 020428 220 IKTAAGASSVMAARGALWNASIFSSQ 245 (326)
Q Consensus 220 ~l~~~Gad~VmiGr~~l~~P~lf~~~ 245 (326)
++ ..|||+|++||+++.+||+|++.
T Consensus 218 ~~-~~Gad~v~vg~al~~~p~~~~~~ 242 (247)
T 3tdn_A 218 AF-LRGADKVSINTAAVENPSLITQI 242 (247)
T ss_dssp --------------------------
T ss_pred HH-HcCCcHhhccHHHHcCcHHHHHH
Confidence 99 47999999999999999999873
No 63
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=99.56 E-value=5.2e-14 Score=126.34 Aligned_cols=152 Identities=15% Similarity=0.163 Sum_probs=117.9
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhh-cccCcEEE---
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKR-NLDVPVTC--- 148 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~-~~~~pv~v--- 148 (326)
..+.|+++.=+-+++++..++.+ .|+|+|-+ |..++.+|+.+.++.+.... .+-+.+++
T Consensus 73 ~~~iPvi~~Ggi~~~~~~~~~~~---~Gad~V~l--------------g~~~l~~p~~~~~~~~~~~~~~i~~~~~~~~~ 135 (252)
T 1ka9_F 73 RVFIPLTVGGGVRSLEDARKLLL---SGADKVSV--------------NSAAVRRPELIRELADHFGAQAVVLAIDARWR 135 (252)
T ss_dssp TCCSCEEEESSCCSHHHHHHHHH---HTCSEEEE--------------CHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEE
T ss_pred hCCCCEEEECCcCCHHHHHHHHH---cCCCEEEE--------------ChHHHhCcHHHHHHHHHcCCCcEEEEEEEecC
Confidence 33568887544466665554433 38888876 46677889999998888753 22233333
Q ss_pred ------EecCCCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHH
Q 020428 149 ------KIRLLKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQR 219 (326)
Q Consensus 149 ------K~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~ 219 (326)
+++ +|.. .++.+.++.+++.|++.|.+|++++.+.+.++ +|+.++++++.+++|||++|||.+++|+.+
T Consensus 136 ~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~i~~l~~~~~ipvia~GGI~~~~d~~~ 213 (252)
T 1ka9_F 136 GDFPEVHVA-GGRVPTGLHAVEWAVKGVELGAGEILLTSMDRDGTKEGY-DLRLTRMVAEAVGVPVIASGGAGRMEHFLE 213 (252)
T ss_dssp TTEEEEEET-TTTEEEEEEHHHHHHHHHHHTCCEEEEEETTTTTTCSCC-CHHHHHHHHHHCSSCEEEESCCCSHHHHHH
T ss_pred CCCEEEEEC-CCccccCCcHHHHHHHHHHcCCCEEEEecccCCCCcCCC-CHHHHHHHHHHcCCCEEEeCCCCCHHHHHH
Confidence 332 4543 35789999999999999999998888776665 899999999999999999999999999999
Q ss_pred HHHhcCCcEEEeccchhcCcccccc
Q 020428 220 IKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 220 ~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
++ .+|||+|++||+++.+|+.+.+
T Consensus 214 ~~-~~Gadgv~vgsal~~~~~~~~~ 237 (252)
T 1ka9_F 214 AF-QAGAEAALAASVFHFGEIPIPK 237 (252)
T ss_dssp HH-HTTCSEEEESHHHHTTSSCHHH
T ss_pred HH-HCCCHHHHHHHHHHcCCCCHHH
Confidence 99 5999999999999999987664
No 64
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=99.55 E-value=7.3e-14 Score=125.47 Aligned_cols=150 Identities=16% Similarity=0.131 Sum_probs=117.5
Q ss_pred CCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhh-cccCcEEE----
Q 020428 74 ERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKR-NLDVPVTC---- 148 (326)
Q Consensus 74 ~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~-~~~~pv~v---- 148 (326)
.+.|+++.-+-+++++..++. ..|+|+|-+ |+.++.+|+.+.++++.+.. .+.+.+++
T Consensus 73 ~~ipvi~~ggI~~~~~~~~~~---~~Gad~V~l--------------g~~~l~~p~~~~~~~~~~g~~~i~~~~~~~~~~ 135 (253)
T 1thf_D 73 IDIPFTVGGGIHDFETASELI---LRGADKVSI--------------NTAAVENPSLITQIAQTFGSQAVVVAIDAKRVD 135 (253)
T ss_dssp CCSCEEEESSCCSHHHHHHHH---HTTCSEEEE--------------SHHHHHCTHHHHHHHHHHCGGGEEEEEEEEEET
T ss_pred CCCCEEEeCCCCCHHHHHHHH---HcCCCEEEE--------------ChHHHhChHHHHHHHHHcCCCcEEEEEEEEccC
Confidence 346888776667777644443 348998865 46677889999998888753 22233333
Q ss_pred -----EecCCCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHH
Q 020428 149 -----KIRLLKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRI 220 (326)
Q Consensus 149 -----K~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~ 220 (326)
+++ +|.. .++.++++.+++.|++.|.+|++++.+.+.++ +|+.++++++.+++|||++|||.+++|+.++
T Consensus 136 g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~~~~~~~g~~~g~-~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~ 213 (253)
T 1thf_D 136 GEFMVFTY-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEA 213 (253)
T ss_dssp TEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTSCSCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHH
T ss_pred CcEEEEEC-CCccccCCCHHHHHHHHHHCCCCEEEEEeccCCCCCCCC-CHHHHHHHHHhcCCCEEEECCCCCHHHHHHH
Confidence 332 4532 35789999999999999999999888777665 8999999999999999999999999999999
Q ss_pred HHhcCCcEEEeccchhcCccccc
Q 020428 221 KTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 221 l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
+ .+|||+|++||+++.+|+.+.
T Consensus 214 ~-~~Gadgv~vGsal~~~~~~~~ 235 (253)
T 1thf_D 214 F-LAGADAALAASVFHFREIDVR 235 (253)
T ss_dssp H-HTTCSEEEESHHHHTTCSCHH
T ss_pred H-HcCChHHHHHHHHHcCCCCHH
Confidence 9 599999999999999887544
No 65
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=99.53 E-value=2.3e-13 Score=128.17 Aligned_cols=192 Identities=13% Similarity=0.096 Sum_probs=129.4
Q ss_pred CCCCceEEccccCCCCHHHHHHHHHcCC-CeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTLPFRLLAAQYGA-DITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~~fr~~~~~~G~-~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
.++.||++|||.+.++..+...+.+.|. +.+...+ +.+.... ++... +..-.++.+
T Consensus 55 ~l~~PIi~ApM~~~~~~~lA~Ava~~Gglg~i~~~~-s~e~~~~-------------~i~~~---------p~~l~~v~~ 111 (351)
T 2c6q_A 55 YSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHY-SLVQWQE-------------FAGQN---------PDCLEHLAA 111 (351)
T ss_dssp EEECCEEECSSTTTSCHHHHHHHHHTTCEEECCTTC-CHHHHHH-------------HHHHC---------GGGCTTEEE
T ss_pred cccCCEEECCCCCCCcHHHHHHHHHCCCEEEEcCCC-CHHHHHH-------------HHhhC---------chhhheeEe
Confidence 4678999999999999999998888874 4443322 2221111 00000 000024666
Q ss_pred EECCCCHHHHHHHHHHhhc--CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChH
Q 020428 81 QMGTSDAVRALTAAKMVCK--DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQ 157 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~--~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~ 157 (326)
.+ |.+++.+.++...+.. +++.+.++..- | ++..+.+.++++++.+ ++||.++.-
T Consensus 112 ~~-g~~~~~~~~~~~l~~~~~g~~~i~i~~~~----------g-----~~~~~~~~i~~lr~~~~~~~vi~g~v------ 169 (351)
T 2c6q_A 112 SS-GTGSSDFEQLEQILEAIPQVKYICLDVAN----------G-----YSEHFVEFVKDVRKRFPQHTIMAGNV------ 169 (351)
T ss_dssp EE-CSSHHHHHHHHHHHHHCTTCCEEEEECSC----------T-----TBHHHHHHHHHHHHHCTTSEEEEEEE------
T ss_pred ec-CCChHHHHHHHHHHhccCCCCEEEEEecC----------C-----CcHHHHHHHHHHHHhcCCCeEEEEeC------
Confidence 66 4556666666666654 78988876421 1 3556778899999988 899998753
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccC------CCCCCcCCHHHHHHHHH---hcCCcEEEeCCCCCHHHHHHHHHhcCCcE
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVA------DRPRDPAKWGEIADIVA---ALSIPVIANGDVFEYDDFQRIKTAAGASS 228 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~------~~~~~~~~~~~i~~i~~---~~~iPVi~nGgI~s~~d~~~~l~~~Gad~ 228 (326)
.+.+.|+.+.++|+|+|.|...... ....+.+....+.++.+ ..++|||+.|||.|+.|+.+++ ..|||+
T Consensus 170 ~t~e~A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAl-alGA~~ 248 (351)
T 2c6q_A 170 VTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAF-GAGADF 248 (351)
T ss_dssp CSHHHHHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSE
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHH-HcCCCc
Confidence 2356789999999999988421100 00012344555555544 3589999999999999999999 699999
Q ss_pred EEeccchhcCc
Q 020428 229 VMAARGALWNA 239 (326)
Q Consensus 229 VmiGr~~l~~P 239 (326)
|++||.++..+
T Consensus 249 V~vG~~fl~~~ 259 (351)
T 2c6q_A 249 VMLGGMLAGHS 259 (351)
T ss_dssp EEESTTTTTBT
T ss_pred eeccHHHhcCc
Confidence 99999998643
No 66
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.52 E-value=3.7e-14 Score=126.76 Aligned_cols=148 Identities=13% Similarity=0.164 Sum_probs=111.2
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE-----E
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC-----K 149 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v-----K 149 (326)
+.|+++.=+-++++++.++.+ .|+|+|-+ |+.++.+|+.+.++ +...+.+-+.+++ +
T Consensus 73 ~ipvi~~Ggi~~~~~~~~~~~---~Gad~V~l--------------g~~~l~~p~~~~~~-~~~g~~i~~~~d~~~~~v~ 134 (241)
T 1qo2_A 73 AEHIQIGGGIRSLDYAEKLRK---LGYRRQIV--------------SSKVLEDPSFLKSL-REIDVEPVFSLDTRGGRVA 134 (241)
T ss_dssp GGGEEEESSCCSHHHHHHHHH---TTCCEEEE--------------CHHHHHCTTHHHHH-HTTTCEEEEEEEEETTEEC
T ss_pred CCcEEEECCCCCHHHHHHHHH---CCCCEEEE--------------CchHhhChHHHHHH-HHcCCcEEEEEEecCCEEE
Confidence 346665433356665555333 48888754 56778889888888 6664332223333 3
Q ss_pred ecCCCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc--
Q 020428 150 IRLLKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA-- 224 (326)
Q Consensus 150 ~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~-- 224 (326)
+ .||.. .++.++++.+++.|++.|.+|++++++.+.++ +|+.++++++.+++|||++|||.|++|+.++++.+
T Consensus 135 ~-~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~ 212 (241)
T 1qo2_A 135 F-KGWLAEEEIDPVSLLKRLKEYGLEEIVHTEIEKDGTLQEH-DFSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTE 212 (241)
T ss_dssp C-TTCSSCSCCCHHHHHHHHHTTTCCEEEEEETTHHHHTCCC-CHHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHH
T ss_pred E-CCceecCCCCHHHHHHHHHhCCCCEEEEEeecccccCCcC-CHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccc
Confidence 3 25542 25788999999999999999999887766655 89999999999999999999999999999999644
Q ss_pred --C-CcEEEeccchhcCcccc
Q 020428 225 --G-ASSVMAARGALWNASIF 242 (326)
Q Consensus 225 --G-ad~VmiGr~~l~~P~lf 242 (326)
| ||||++||+++..+.-+
T Consensus 213 ~~G~adgv~vgsal~~~~~~~ 233 (241)
T 1qo2_A 213 TNGLLKGVIVGRAFLEGILTV 233 (241)
T ss_dssp TTTSEEEEEECHHHHTTSSCH
T ss_pred cCCeEeEEEeeHHHHcCCCCH
Confidence 9 99999999999877543
No 67
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=99.50 E-value=2.6e-13 Score=123.35 Aligned_cols=193 Identities=13% Similarity=0.158 Sum_probs=127.0
Q ss_pred CCCceEEccccCCCCHH-HHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEE
Q 020428 3 YQNKLVLAPMVRVGTLP-FRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQ 81 (326)
Q Consensus 3 l~~~iilAPM~g~t~~~-fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQ 81 (326)
+.++++++||.+..+.. +...+.++|++.+.+.. .+... ..+... ...|+++|
T Consensus 32 id~~~~l~p~~~~~~~~~~~~~~~~~g~~~i~~~~----~~~~~---------------------~~~~~~-~~~~~~v~ 85 (273)
T 2qjg_A 32 MDHGVSNGPIKGLIDIRKTVNDVAEGGANAVLLHK----GIVRH---------------------GHRGYG-KDVGLIIH 85 (273)
T ss_dssp CCHHHHHCSCTTSSSHHHHHHHHHHHTCSEEEECH----HHHHS---------------------CCCSSS-CCCEEEEE
T ss_pred cccccccCCCcchhhHHHHHHHHHhcCCCEEEeCH----HHHHH---------------------HHHhhc-CCCCEEEE
Confidence 45567789999999874 44556678998776542 11110 000011 13478889
Q ss_pred ECCCC-----HH--H-HHHHHHHhhcCCCEE--EEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEec
Q 020428 82 MGTSD-----AV--R-ALTAAKMVCKDVAAI--DINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIR 151 (326)
Q Consensus 82 l~g~~-----~~--~-~~~aa~~~~~~~d~i--dlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r 151 (326)
+.+.. +. . ..++.+.+..|++.| .+|.+|+.. ..+ .+.+.++++..++ .++|+.+.+-
T Consensus 86 ~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l~~~~~~~--------~~~---~~~~~~v~~~~~~-~g~~viv~~~ 153 (273)
T 2qjg_A 86 LSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHVNVGSDED--------WEA---YRDLGMIAETCEY-WGMPLIAMMY 153 (273)
T ss_dssp CEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEEEETSTTH--------HHH---HHHHHHHHHHHHH-HTCCEEEEEE
T ss_pred EcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEEecCCCCH--------HHH---HHHHHHHHHHHHH-cCCCEEEEeC
Confidence 86433 11 1 222223333599999 778887622 111 1334444444443 4888888762
Q ss_pred -------CCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCC--HHHHHHHHH
Q 020428 152 -------LLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFE--YDDFQRIKT 222 (326)
Q Consensus 152 -------~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s--~~d~~~~l~ 222 (326)
.+.+..+..+.++.+++.|+|+|.++. +.+++.++++++.+++||++.|||.+ .+|+.+++.
T Consensus 154 ~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~---------~~~~~~l~~i~~~~~ipvva~GGi~~~~~~~~~~~~~ 224 (273)
T 2qjg_A 154 PRGKHIQNERDPELVAHAARLGAELGADIVKTSY---------TGDIDSFRDVVKGCPAPVVVAGGPKTNTDEEFLQMIK 224 (273)
T ss_dssp ECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECC---------CSSHHHHHHHHHHCSSCEEEECCSCCSSHHHHHHHHH
T ss_pred CCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECC---------CCCHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHH
Confidence 124455556667999999999999873 35899999999999999999999995 888544432
Q ss_pred ---hcCCcEEEeccchhcCcccc
Q 020428 223 ---AAGASSVMAARGALWNASIF 242 (326)
Q Consensus 223 ---~~Gad~VmiGr~~l~~P~lf 242 (326)
..||++|++||+++.+|+.+
T Consensus 225 ~~~~~Ga~gv~vg~~i~~~~~~~ 247 (273)
T 2qjg_A 225 DAMEAGAAGVAVGRNIFQHDDVV 247 (273)
T ss_dssp HHHHHTCSEEECCHHHHTSSSHH
T ss_pred HHHHcCCcEEEeeHHhhCCCCHH
Confidence 58999999999999888643
No 68
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=99.49 E-value=1.9e-13 Score=123.65 Aligned_cols=152 Identities=12% Similarity=0.069 Sum_probs=105.3
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCcccccccccccccc-C--ChHHHHHHHHHHh---hcc--cC
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALL-S--KPELIHDILTMLK---RNL--DV 144 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~-~--~p~~~~~iv~~v~---~~~--~~ 144 (326)
..+.|+++.=+-++++++.++.+ .|+|++-+. +.++ . +|+.+.++++... +.+ ++
T Consensus 72 ~~~iPvi~~ggi~~~~~i~~~~~---~Gad~v~lg--------------~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~ 134 (266)
T 2w6r_A 72 LTTLPIIASGGAGKMEHFLEAFL---AGADKALAA--------------SVFHFREIDMRELKEYLKKHGGSGQAVVVAI 134 (266)
T ss_dssp GCCSCEEEESCCCSTHHHHHHHH---HTCSEEECC--------------CCC------CHHHHHHCC----CCCEEEEEE
T ss_pred hcCCCEEEECCCCCHHHHHHHHH---cCCcHhhhh--------------HHHHhCCCCHHHHHHHHHHcCCCCCEEEEEE
Confidence 33568887644466677655442 488888763 3444 3 7888888776654 222 22
Q ss_pred cE-------EEEecCCCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCH
Q 020428 145 PV-------TCKIRLLKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEY 214 (326)
Q Consensus 145 pv-------~vK~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~ 214 (326)
++ .|+++ +|+. .+..++++.+++.|++.|.+|++++.+.+.++ +++.++++++.+++|||++|||.++
T Consensus 135 d~~~~~g~~~v~~~-g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~-~~~~i~~l~~~~~ipvia~GGI~~~ 212 (266)
T 2w6r_A 135 DAKRVDGEFMVFTH-SGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKM 212 (266)
T ss_dssp EEEEETTEEEEEET-TTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCC-CHHHHHHHGGGCCSCEEEESCCCSH
T ss_pred EEEecCCCEEEEEC-CCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCC-CHHHHHHHHHHcCCCEEEeCCCCCH
Confidence 22 34443 4532 35788899999999999999999888776665 8999999999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEeccchhcCcccccc
Q 020428 215 DDFQRIKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 215 ~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
+|+.+++ .+|||+|++|++++.+|+.+.+
T Consensus 213 ed~~~~~-~~Gadgv~vgsal~~~~~~~~~ 241 (266)
T 2w6r_A 213 EHFLEAF-LAGADAALAASVFHFREIDMRE 241 (266)
T ss_dssp HHHHHHH-HHTCSEEEESTTTC--------
T ss_pred HHHHHHH-HcCCHHHHccHHHHcCCCCHHH
Confidence 9999999 5899999999999999988776
No 69
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=99.47 E-value=6.8e-13 Score=118.41 Aligned_cols=148 Identities=20% Similarity=0.223 Sum_probs=115.2
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhh-cc----cC-----
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKR-NL----DV----- 144 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~-~~----~~----- 144 (326)
+.|+++.-+-.+++++.++.+ .|+|+|.++ ..++.+|+.+.++.+.... .+ +.
T Consensus 77 ~ipvi~~g~i~~~~~~~~~~~---~Gad~V~i~--------------~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g 139 (253)
T 1h5y_A 77 SIPVLVGGGVRSLEDATTLFR---AGADKVSVN--------------TAAVRNPQLVALLAREFGSQSTVVAIDAKWNGE 139 (253)
T ss_dssp SSCEEEESSCCSHHHHHHHHH---HTCSEEEES--------------HHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSS
T ss_pred CCCEEEECCCCCHHHHHHHHH---cCCCEEEEC--------------hHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCC
Confidence 468888776678876644332 489999987 3456788888888777642 11 22
Q ss_pred cEEEEecCCCC--hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHH
Q 020428 145 PVTCKIRLLKS--SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKT 222 (326)
Q Consensus 145 pv~vK~r~g~~--~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~ 222 (326)
++.++++.+++ ..+..++++.+.+.|+|.|.+|+++..+...+ .+++.++++++.+++||+++|||.+++++.+++
T Consensus 140 ~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~-~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~- 217 (253)
T 1h5y_A 140 YYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLG-YDVELIRRVADSVRIPVIASGGAGRVEHFYEAA- 217 (253)
T ss_dssp SEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSC-CCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-
T ss_pred cEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCc-CCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHH-
Confidence 15777776542 23578889999999999999999988766544 489999999999999999999999999999999
Q ss_pred hcCCcEEEeccchhcCccc
Q 020428 223 AAGASSVMAARGALWNASI 241 (326)
Q Consensus 223 ~~Gad~VmiGr~~l~~P~l 241 (326)
..|||+|++||+++.+++-
T Consensus 218 ~~Ga~~v~vgsal~~~~~~ 236 (253)
T 1h5y_A 218 AAGADAVLAASLFHFRVLS 236 (253)
T ss_dssp HTTCSEEEESHHHHTTSSC
T ss_pred HcCCcHHHHHHHHHcCCCC
Confidence 6999999999999877643
No 70
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.39 E-value=1.9e-12 Score=127.05 Aligned_cols=134 Identities=22% Similarity=0.232 Sum_probs=103.3
Q ss_pred CCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 84 TSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
|..++.+..+..++..|+|.|.||.+|+. ++.+.++++++++.+ ++||.++.- .+.+.
T Consensus 225 G~~~~~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~v~~i~~~~p~~~Vi~g~v------~t~e~ 283 (490)
T 4avf_A 225 GTGADTGERVAALVAAGVDVVVVDTAHGH---------------SKGVIERVRWVKQTFPDVQVIGGNI------ATAEA 283 (490)
T ss_dssp CSSTTHHHHHHHHHHTTCSEEEEECSCCS---------------BHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH
T ss_pred ccccchHHHHHHHhhcccceEEecccCCc---------------chhHHHHHHHHHHHCCCceEEEeee------CcHHH
Confidence 44455566666666569999999988874 356778899999887 789988632 23467
Q ss_pred HHHHHHcCCcEEEEe------ecccCCCCCCcCCHHHHHHHHHhc---CCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 163 ARRIEKTGVSALAVH------GRKVADRPRDPAKWGEIADIVAAL---SIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 163 a~~l~~~G~d~i~vh------~r~~~~~~~~~~~~~~i~~i~~~~---~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
++.+.++|+|+|.+- ..++.....+.++++.+.++++.+ ++|||+.|||.+++|+.+++ ..|||+||+||
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-~~GAd~V~vGs 362 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAM-VAGAYCVMMGS 362 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHH-HHTCSEEEECT
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHH-HcCCCeeeecH
Confidence 899999999999982 222222223466888888888754 79999999999999999999 58999999999
Q ss_pred chhcCc
Q 020428 234 GALWNA 239 (326)
Q Consensus 234 ~~l~~P 239 (326)
+++..+
T Consensus 363 ~~~~~~ 368 (490)
T 4avf_A 363 MFAGTE 368 (490)
T ss_dssp TTTTBT
T ss_pred HHhcCC
Confidence 998744
No 71
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.38 E-value=5.1e-12 Score=124.93 Aligned_cols=136 Identities=16% Similarity=0.139 Sum_probs=102.4
Q ss_pred HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHH
Q 020428 87 AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARR 165 (326)
Q Consensus 87 ~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~ 165 (326)
++...++...+..|+|.|+||.+|. +++...++++++++.+ ++||.+|-- .+.+.|+.
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G---------------~~~~~~~~i~~i~~~~~~~pvi~~~v------~t~~~a~~ 312 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQG---------------NSVYQIAMVHYIKQKYPHLQVIGGNV------VTAAQAKN 312 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC---------------CSHHHHHHHHHHHHHCTTCEEEEEEE------CSHHHHHH
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCC---------------cchhHHHHHHHHHHhCCCCceEeccc------chHHHHHH
Confidence 3444444444445999999998763 2356778899999988 899988621 34567999
Q ss_pred HHHcCCcEEEEe---ecc---cCCCCCC---cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 166 IEKTGVSALAVH---GRK---VADRPRD---PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 166 l~~~G~d~i~vh---~r~---~~~~~~~---~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
+.++|+|+|.+. |.. +.....+ +..+..+.++++.+++|||++|||.+++|+.+++ ..|||+||+||+++
T Consensus 313 l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kal-a~GAd~V~iG~~~l 391 (514)
T 1jcn_A 313 LIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKAL-ALGASTVMMGSLLA 391 (514)
T ss_dssp HHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTTT
T ss_pred HHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHH-HcCCCeeeECHHHH
Confidence 999999999982 111 1111112 3356778888888899999999999999999999 58999999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.+|+....
T Consensus 392 ~~~e~~~~ 399 (514)
T 1jcn_A 392 ATTEAPGE 399 (514)
T ss_dssp TSTTSSCC
T ss_pred cCCcCCcc
Confidence 99876544
No 72
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=99.38 E-value=2.2e-12 Score=113.70 Aligned_cols=155 Identities=16% Similarity=0.241 Sum_probs=107.4
Q ss_pred EEEEECCC----CHHHHHHHHHHhhc-CCCEEEEc-----------cCCCcccccccc--------------------cc
Q 020428 78 VVFQMGTS----DAVRALTAAKMVCK-DVAAIDIN-----------MGCPKSFSVSGG--------------------MG 121 (326)
Q Consensus 78 ~~vQl~g~----~~~~~~~aa~~~~~-~~d~idlN-----------~gcP~~~~~~~~--------------------~G 121 (326)
+.+|+.+. +++...+.|+.+.+ |++++.++ .++|.....+.. .|
T Consensus 9 ~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~G 88 (223)
T 1y0e_A 9 VSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRANTKEDILAIKETVDLPVIGIVKRDYDHSDVFITATSKEVDELIESQ 88 (223)
T ss_dssp EECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEESHHHHHHHHHHCCSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHT
T ss_pred EEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccCCHHHHHHHHHhcCCCEEeeeccCCCccccccCCcHHHHHHHHhCC
Confidence 55687776 66788888888766 88988876 456763211111 12
Q ss_pred ccc-------cCCh-HHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEe--ecccCCCCC--Cc
Q 020428 122 AAL-------LSKP-ELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVH--GRKVADRPR--DP 188 (326)
Q Consensus 122 ~~l-------~~~p-~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh--~r~~~~~~~--~~ 188 (326)
+.. ..+| +.+.++++.+++.+ +.++.+.+. + .+.+..+++.|+|+|.+. +.+...... ..
T Consensus 89 ad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~---t----~~e~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~ 161 (223)
T 1y0e_A 89 CEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIA---T----VEEAKNAARLGFDYIGTTLHGYTSYTQGQLLYQ 161 (223)
T ss_dssp CSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECS---S----HHHHHHHHHTTCSEEECTTTTSSTTSTTCCTTH
T ss_pred CCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCC---C----HHHHHHHHHcCCCEEEeCCCcCcCCCCCCCCCc
Confidence 211 1234 34567777887765 666766553 2 334667899999999763 344322221 34
Q ss_pred CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 189 AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 189 ~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
.+++.++++++.+++||++.|||.|++++.+++ ..|||+|++||+++. |+.
T Consensus 162 ~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~-~~Gad~v~vG~al~~-p~~ 212 (223)
T 1y0e_A 162 NDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVM-DLGVHCSVVGGAITR-PKE 212 (223)
T ss_dssp HHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHC-HHH
T ss_pred ccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHH-HcCCCEEEEChHHcC-cHH
Confidence 578899999999999999999999999999999 589999999999665 653
No 73
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.37 E-value=2.5e-12 Score=126.42 Aligned_cols=134 Identities=22% Similarity=0.161 Sum_probs=102.1
Q ss_pred CCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 84 TSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
|..++.+..+..++..|+|.|.||..||. .+.+.++++++++.+ ++||.++.- .+.+.
T Consensus 227 G~~~d~~~~a~~l~~aG~d~I~id~a~g~---------------~~~~~~~i~~ir~~~p~~~Vi~g~v------~t~e~ 285 (496)
T 4fxs_A 227 GAAPGNEERVKALVEAGVDVLLIDSSHGH---------------SEGVLQRIRETRAAYPHLEIIGGNV------ATAEG 285 (496)
T ss_dssp CSSSCCHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTCCEEEEEE------CSHHH
T ss_pred ccccchHHHHHHHHhccCceEEecccccc---------------chHHHHHHHHHHHHCCCceEEEccc------CcHHH
Confidence 44444555555556569999999999873 356778899999887 789988532 23467
Q ss_pred HHHHHHcCCcEEEEee------cccCCCCCCcCCHHHHHHHHHh---cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 163 ARRIEKTGVSALAVHG------RKVADRPRDPAKWGEIADIVAA---LSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~------r~~~~~~~~~~~~~~i~~i~~~---~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
++.+.++|+|+|.+.+ .++.....+.+++..+.++++. .++|||++|||.+++|+.+++ ..|||+||+||
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GAd~V~iGs 364 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAI-AAGASCVMVGS 364 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEEST
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHH-HcCCCeEEecH
Confidence 8999999999999842 2222222345678888888774 479999999999999999999 58999999999
Q ss_pred chhcCc
Q 020428 234 GALWNA 239 (326)
Q Consensus 234 ~~l~~P 239 (326)
+++...
T Consensus 365 ~f~~t~ 370 (496)
T 4fxs_A 365 MFAGTE 370 (496)
T ss_dssp TTTTBT
T ss_pred HHhcCC
Confidence 998743
No 74
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=99.35 E-value=2.2e-11 Score=116.04 Aligned_cols=144 Identities=13% Similarity=0.157 Sum_probs=123.9
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLK 154 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~ 154 (326)
|+...+.+.+++++.++|+.+.+ ||+.|+|++|| +++...++++++|+++ ++++.++.+.+|
T Consensus 138 ~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~gd~~l~vD~n~~~ 201 (384)
T 2pgw_A 138 GYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR----------------GEKLDLEITAAVRGEIGDARLRLDANEGW 201 (384)
T ss_dssp EBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHTTSTTCEEEEECTTCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC----------------CHHHHHHHHHHHHHHcCCcEEEEecCCCC
Confidence 44444556789999998888766 99999999885 5788899999999998 688889888889
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
+.++++++++.++++|+++|. +.. .+.+|+..+++++.+++||++++.+.|+++++++++...+|.|++..+
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~ 273 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIE-------QPT-VSWSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPR 273 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEE-------CCS-CTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEe-------CCC-ChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcch
Confidence 999999999999999999985 222 466899999999999999999999999999999997777999999999
Q ss_pred hhcCcccccc
Q 020428 235 ALWNASIFSS 244 (326)
Q Consensus 235 ~l~~P~lf~~ 244 (326)
.+++++-+.+
T Consensus 274 ~~GGit~~~~ 283 (384)
T 2pgw_A 274 EIGGIQPMMK 283 (384)
T ss_dssp HHTSHHHHHH
T ss_pred hhCCHHHHHH
Confidence 8888765544
No 75
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=99.34 E-value=4e-12 Score=112.73 Aligned_cols=122 Identities=15% Similarity=0.122 Sum_probs=95.5
Q ss_pred HhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEE
Q 020428 96 MVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALA 175 (326)
Q Consensus 96 ~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~ 175 (326)
.+..|+|.|-++..+ ..+|+.+.++++.+++. +.++.+.+. +.+.++.++++|+|+|.
T Consensus 97 ~~~aGad~I~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 97 LAQAGADIIAFDASF--------------RSRPVDIDSLLTRIRLH-GLLAMADCS-------TVNEGISCHQKGIEFIG 154 (229)
T ss_dssp HHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECS-------SHHHHHHHHHTTCSEEE
T ss_pred HHHcCCCEEEECccc--------------cCChHHHHHHHHHHHHC-CCEEEEecC-------CHHHHHHHHhCCCCEEE
Confidence 344599999887542 23566788888888775 788888763 46778899999999996
Q ss_pred E--eecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 176 V--HGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 176 v--h~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
+ +|+|.... ...++|+.++++++. ++|||++|||.|++|+.+++ ..|||+|+||++++ +|+.+.
T Consensus 155 ~~~~g~t~~~~-~~~~~~~li~~l~~~-~ipvIA~GGI~t~~d~~~~~-~~GadgV~VGsai~-~p~~~~ 220 (229)
T 3q58_A 155 TTLSGYTGPIT-PVEPDLAMVTQLSHA-GCRVIAEGRYNTPALAANAI-EHGAWAVTVGSAIT-RIEHIC 220 (229)
T ss_dssp CTTTTSSSSCC-CSSCCHHHHHHHHTT-TCCEEEESSCCSHHHHHHHH-HTTCSEEEECHHHH-CHHHHH
T ss_pred ecCccCCCCCc-CCCCCHHHHHHHHHc-CCCEEEECCCCCHHHHHHHH-HcCCCEEEEchHhc-ChHHHH
Confidence 4 56655432 346689999999988 99999999999999999999 58999999997765 565543
No 76
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=99.34 E-value=2.5e-11 Score=112.22 Aligned_cols=150 Identities=21% Similarity=0.267 Sum_probs=96.8
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
.+++++. +|.++ |+.+.+ |+++|.+. ||.+...+...|+..+.+++.+.++ ++.+++|+.+|+|.++
T Consensus 22 ~g~i~~~---~~~~~---a~~~~~~Ga~~I~~l--~p~~~~~~~~~G~~~~~~~~~i~~I----~~~~~iPv~~k~r~g~ 89 (305)
T 2nv1_A 22 GGVIMDV---INAEQ---AKIAEEAGAVAVMAL--ERVPADIRAAGGVARMADPTIVEEV----MNAVSIPVMAKARIGH 89 (305)
T ss_dssp TCEEEEE---SSHHH---HHHHHHTTCSEEEEC--CC-------CCCCCCCCCHHHHHHH----HHHCSSCEEEEECTTC
T ss_pred CCeeecC---CHHHH---HHHHHHcCCCEEEEc--CCCcchhhhccCcccCCCHHHHHHH----HHhCCCCEEecccccc
Confidence 3566643 55444 444444 89999543 3776666677777788888877666 4456899999998743
Q ss_pred Ch-----------------------------------------HHHHHHHHHHHHcCCcEEEEee--------------c
Q 020428 155 SS-----------------------------------------QDTVELARRIEKTGVSALAVHG--------------R 179 (326)
Q Consensus 155 ~~-----------------------------------------~~~~e~a~~l~~~G~d~i~vh~--------------r 179 (326)
.. .+..+.. ...+.|+|+|.++| |
T Consensus 90 ~~~~~~~~a~GAd~V~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~-~a~~~Gad~V~~~G~~g~g~~~~~~~h~r 168 (305)
T 2nv1_A 90 IVEARVLEAMGVDYIDESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEAT-RRIAEGASMLRTKGEPGTGNIVEAVRHMR 168 (305)
T ss_dssp HHHHHHHHHHTCSEEEECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHH-HHHHTTCSEEEECCCTTSCCTHHHHHHHH
T ss_pred hHHHHHHHHCCCCEEEEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHH-HHHHCCCCEEEeccccCccchHHHHhhhh
Confidence 10 0011222 22356666666643 1
Q ss_pred c------------cCCCCC----CcCCHHHHHHHHHhcCCcEE--EeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 180 K------------VADRPR----DPAKWGEIADIVAALSIPVI--ANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 180 ~------------~~~~~~----~~~~~~~i~~i~~~~~iPVi--~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+ ..+.+. .+.+++.++++++.+++||+ ++|||.|++|+.+++ ..|||+|++||+++..+
T Consensus 169 t~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~~~~d~~~~~-~~GadgV~vGsai~~~~ 245 (305)
T 2nv1_A 169 KVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVATPADAALMM-QLGADGVFVGSGIFKSD 245 (305)
T ss_dssp HHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCCSHHHHHHHH-HTTCSCEEECGGGGGSS
T ss_pred hhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCCCHHHHHHHH-HcCCCEEEEcHHHHcCC
Confidence 1 111110 34578999999998899999 999999999999999 58999999999998643
No 77
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=99.33 E-value=2.8e-12 Score=114.94 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=84.0
Q ss_pred EEEEecCCCC--hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHh
Q 020428 146 VTCKIRLLKS--SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTA 223 (326)
Q Consensus 146 v~vK~r~g~~--~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~ 223 (326)
..||+|.++. ..++.++++.++++|+++|+++..+..... .+.+++.++++++.+++||+++|||+|++++++++ .
T Consensus 22 ~~v~~~~~~~~~~~~~~~~a~~~~~~G~~~i~v~d~~~~~~~-~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l-~ 99 (247)
T 3tdn_A 22 FMVFTYSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTK-SGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-L 99 (247)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTCS-SCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-H
T ss_pred EEEEEcCCeecCCCCHHHHHHHHHHcCCCEEEEEecCcccCC-CcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-H
Confidence 5678885543 247899999999999999999998766443 35689999999999999999999999999999999 5
Q ss_pred cCCcEEEeccchhcCcccccc
Q 020428 224 AGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 224 ~Gad~VmiGr~~l~~P~lf~~ 244 (326)
.|||+|++||+++.||+++.+
T Consensus 100 ~Gad~V~ig~~~l~dp~~~~~ 120 (247)
T 3tdn_A 100 RGADKVSINTAAVENPSLITQ 120 (247)
T ss_dssp TTCSEECCSHHHHHCTHHHHH
T ss_pred cCCCeeehhhHHhhChHHHHH
Confidence 899999999999999998765
No 78
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=99.32 E-value=3.5e-10 Score=100.25 Aligned_cols=200 Identities=14% Similarity=0.140 Sum_probs=134.7
Q ss_pred CCCCceEEccccCCCCH-HHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTL-PFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~-~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
++..|+++.- ..|.+. .++...+..|+.++..-+ ....-.+. ...-+ +++..+..+..+..
T Consensus 17 ~f~SRl~~Gt-gky~~~~~~~~a~~asg~e~vtva~---rR~~~~~~--~~~~~------------~~~~i~~~~~~~lp 78 (265)
T 1wv2_A 17 TYGSRLLVGT-GKYKDLDETRRAIEASGAEIVTVAV---RRTNIGQN--PDEPN------------LLDVIPPDRYTILP 78 (265)
T ss_dssp EESCCEEECC-SCSSSHHHHHHHHHHSCCSEEEEEG---GGCCC---------------------------CTTTSEEEE
T ss_pred EeecceEEec-CCCCCHHHHHHHHHHhCCCeEEEEE---EeeccccC--CCcch------------HHhhhhhcCCEECC
Confidence 3566776643 456665 566777777988774321 11100000 00011 23334444455667
Q ss_pred EEC-CCCHHHHHHHHHHhhc---CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCCh
Q 020428 81 QMG-TSDAVRALTAAKMVCK---DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSS 156 (326)
Q Consensus 81 Ql~-g~~~~~~~~aa~~~~~---~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~ 156 (326)
|-. +.+.++.+..|+++.+ +-++|-|-.-. + --.++.|+....+..+.+.+. ++.+..-+-
T Consensus 79 NTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~-------d--~~~llpD~~~tv~aa~~L~~~-Gf~Vlpy~~----- 143 (265)
T 1wv2_A 79 NTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLA-------D--QKTLFPNVVETLKAAEQLVKD-GFDVMVYTS----- 143 (265)
T ss_dssp ECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBS-------C--TTTCCBCHHHHHHHHHHHHTT-TCEEEEEEC-----
T ss_pred cCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeec-------C--ccccCcCHHHHHHHHHHHHHC-CCEEEEEeC-----
Confidence 764 4689999999999887 56788775421 1 124678888887777777554 555543332
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
+...+++.++++|++.|..++..... ..+..++++++.+++..++|||+.|||.|++|+..++ +.|||+|++|+++.
T Consensus 144 -dd~~~akrl~~~G~~aVmPlg~pIGs-G~Gi~~~~lI~~I~e~~~vPVI~eGGI~TPsDAa~Am-eLGAdgVlVgSAI~ 220 (265)
T 1wv2_A 144 -DDPIIARQLAEIGCIAVMPLAGLIGS-GLGICNPYNLRIILEEAKVPVLVDAGVGTASDAAIAM-ELGCEAVLMNTAIA 220 (265)
T ss_dssp -SCHHHHHHHHHSCCSEEEECSSSTTC-CCCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HHTCSEEEESHHHH
T ss_pred -CCHHHHHHHHHhCCCEEEeCCccCCC-CCCcCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-HcCCCEEEEChHHh
Confidence 34678999999999999888874332 2355689999999999999999999999999999999 58999999999975
Q ss_pred c
Q 020428 237 W 237 (326)
Q Consensus 237 ~ 237 (326)
.
T Consensus 221 ~ 221 (265)
T 1wv2_A 221 H 221 (265)
T ss_dssp T
T ss_pred C
Confidence 3
No 79
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=99.32 E-value=7.3e-12 Score=111.27 Aligned_cols=120 Identities=13% Similarity=0.145 Sum_probs=94.2
Q ss_pred HhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEE
Q 020428 96 MVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALA 175 (326)
Q Consensus 96 ~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~ 175 (326)
.+..|+|.|-++..+ ..+|+.+.++++.+++. ++++.+.+. +.+.++.+++.|+|+|.
T Consensus 97 ~~~~Gad~V~l~~~~--------------~~~p~~l~~~i~~~~~~-g~~v~~~v~-------t~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 97 LAQAGAAIIAVDGTA--------------RQRPVAVEALLARIHHH-HLLTMADCS-------SVDDGLACQRLGADIIG 154 (232)
T ss_dssp HHHHTCSEEEEECCS--------------SCCSSCHHHHHHHHHHT-TCEEEEECC-------SHHHHHHHHHTTCSEEE
T ss_pred HHHcCCCEEEECccc--------------cCCHHHHHHHHHHHHHC-CCEEEEeCC-------CHHHHHHHHhCCCCEEE
Confidence 344599999886532 24567788888888775 788887763 45778899999999996
Q ss_pred E--eecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 176 V--HGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 176 v--h~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+ +|++.... ...++|+.++++++. ++|||++|||.|++|+.+++ ..|||+|+||++++ +|+.
T Consensus 155 ~~~~g~t~~~~-~~~~~~~~i~~l~~~-~ipvIA~GGI~t~~d~~~~~-~~GadgV~VGsal~-~p~~ 218 (232)
T 3igs_A 155 TTMSGYTTPDT-PEEPDLPLVKALHDA-GCRVIAEGRYNSPALAAEAI-RYGAWAVTVGSAIT-RLEH 218 (232)
T ss_dssp CTTTTSSSSSC-CSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHH-HTTCSEEEECHHHH-CHHH
T ss_pred EcCccCCCCCC-CCCCCHHHHHHHHhc-CCcEEEECCCCCHHHHHHHH-HcCCCEEEEehHhc-CHHH
Confidence 4 56655443 245689999999988 99999999999999999999 58999999998866 4544
No 80
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=99.29 E-value=1.4e-11 Score=109.33 Aligned_cols=154 Identities=16% Similarity=0.171 Sum_probs=106.9
Q ss_pred CCcEEEEECCCC----HH--HHHHHHHHhhc-CCCEEEEc-----------cCCCccccccc------------------
Q 020428 75 RNHVVFQMGTSD----AV--RALTAAKMVCK-DVAAIDIN-----------MGCPKSFSVSG------------------ 118 (326)
Q Consensus 75 ~~p~~vQl~g~~----~~--~~~~aa~~~~~-~~d~idlN-----------~gcP~~~~~~~------------------ 118 (326)
+.++++|....+ ++ .+.+.++.+.+ |+++|.++ .++|.-.+.++
T Consensus 17 ~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~~~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~ 96 (234)
T 1yxy_A 17 GIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRANSVRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQ 96 (234)
T ss_dssp SCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEESHHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHH
T ss_pred CEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecCCHHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHH
Confidence 345666665543 56 66677776665 88888887 44554211111
Q ss_pred --cccccc-------cCCh--HHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEE--EEeecccCCC
Q 020428 119 --GMGAAL-------LSKP--ELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSAL--AVHGRKVADR 184 (326)
Q Consensus 119 --~~G~~l-------~~~p--~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i--~vh~r~~~~~ 184 (326)
..|+.. ..+| +.+.++++.+++.. +.++.+.++ +.+.+..+.++|+|+| ++++.+....
T Consensus 97 ~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~-------t~~ea~~a~~~Gad~i~~~v~g~~~~~~ 169 (234)
T 1yxy_A 97 LAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADIS-------TFDEGLVAHQAGIDFVGTTLSGYTPYSR 169 (234)
T ss_dssp HHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECS-------SHHHHHHHHHTTCSEEECTTTTSSTTSC
T ss_pred HHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCC-------CHHHHHHHHHcCCCEEeeeccccCCCCc
Confidence 223221 1123 25567788887765 677777664 2344788899999999 7887754322
Q ss_pred CCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 185 PRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 185 ~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
...+.+++.++++++. ++||++.|||+|++++.+++ ..|||+|++||+++.
T Consensus 170 ~~~~~~~~~i~~~~~~-~ipvia~GGI~s~~~~~~~~-~~Gad~v~vGsal~~ 220 (234)
T 1yxy_A 170 QEAGPDVALIEALCKA-GIAVIAEGKIHSPEEAKKIN-DLGVAGIVVGGAITR 220 (234)
T ss_dssp CSSSCCHHHHHHHHHT-TCCEEEESCCCSHHHHHHHH-TTCCSEEEECHHHHC
T ss_pred CCCCCCHHHHHHHHhC-CCCEEEECCCCCHHHHHHHH-HCCCCEEEEchHHhC
Confidence 2235689999999988 99999999999999999999 589999999999876
No 81
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=99.27 E-value=2.7e-11 Score=134.92 Aligned_cols=193 Identities=11% Similarity=0.031 Sum_probs=134.1
Q ss_pred CCceEEcccc-CCCCHHHHHHHHHcCC-CeE-EeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 4 QNKLVLAPMV-RVGTLPFRLLAAQYGA-DIT-YGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 4 ~~~iilAPM~-g~t~~~fr~~~~~~G~-~l~-~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
+.|||+|||. ++|+..+...+.+.|. |.+ ...+.+.+.+...-+. .+.....+.|+++
T Consensus 582 ~~PIi~a~M~~~vs~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~-------------------vk~~~~~~~p~gv 642 (2060)
T 2uva_G 582 VPPVMVAGMTPTTVPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISK-------------------IEKAIPPGRGITV 642 (2060)
T ss_dssp SCSEEECCCTTTTCSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHH-------------------HGGGSCTTCCEEE
T ss_pred cceEEecCCCCccccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHH-------------------HHhhcccCCCeEe
Confidence 6799999999 6999999999999986 555 3344444433211110 0001112468999
Q ss_pred EECCCCHHH---HHHHHHHhhc-CCCE--EEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 81 QMGTSDAVR---ALTAAKMVCK-DVAA--IDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 81 Ql~g~~~~~---~~~aa~~~~~-~~d~--idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
++...+|.. +.+..+.+.+ +++. |.+..|.|.. +.+.+++ ++. ++++.... .
T Consensus 643 N~~~~~p~~~~~~~~~~~~~~~~gv~i~gv~~~~G~p~~---------------e~~~~~l---~~~-gi~~i~~v---~ 700 (2060)
T 2uva_G 643 NLIYVNPRAMGWQIPLLGRLRADGVPIEGLTIGAGVPSI---------------EVANEYI---QTL-GIRHISFK---P 700 (2060)
T ss_dssp EEETTCTTHHHHHHHHHHHHHTTTCCEEEEEEESSCCCH---------------HHHHHHH---HHS-CCSEEEEC---C
T ss_pred cccccCcccchhHHHHHHHHHHcCCCcceEeecCCCCCH---------------HHHHHHH---HHc-CCeEEEec---C
Confidence 997755542 3345555555 7777 8888877632 2333333 333 77776433 2
Q ss_pred ChHHHHHHHHHHHHcCCcEEE---EeecccCCCCCC----cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHH------
Q 020428 155 SSQDTVELARRIEKTGVSALA---VHGRKVADRPRD----PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIK------ 221 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~---vh~r~~~~~~~~----~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l------ 221 (326)
+..++.+.+..+.++|+|.|+ +.|....++.+. ...+.++.+|++.+++|||+.|||.|.+++.+++
T Consensus 701 ~~~~a~~~v~~l~~aG~D~iV~~q~~G~eaGGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~~g~~i~aaltg~ws~ 780 (2060)
T 2uva_G 701 GSVDAIQQVINIAKANPTFPIILQWTGGRGGGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFGGSEDTYPYLTGSWST 780 (2060)
T ss_dssp CSHHHHHHHHHHHHHCTTSCEEEEECCTTSSSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCCSHHHHHHHHHTCGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeeEcccCCCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHhcCcchh
Confidence 346777777888999999999 888766655431 2236788999999999999999999999999999
Q ss_pred -----HhcCCcEEEeccchhcC
Q 020428 222 -----TAAGASSVMAARGALWN 238 (326)
Q Consensus 222 -----~~~Gad~VmiGr~~l~~ 238 (326)
. .|||||++|+.++..
T Consensus 781 ~~g~pa-lGAdgV~~GT~f~~t 801 (2060)
T 2uva_G 781 KFGYPP-MPFDGCMFGSRMMTA 801 (2060)
T ss_dssp TTTSCC-CCCSCEEESGGGGGB
T ss_pred hcCCCC-CCCCEEEEchhhhcC
Confidence 5 799999999999964
No 82
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=99.23 E-value=1.5e-10 Score=109.19 Aligned_cols=141 Identities=9% Similarity=0.138 Sum_probs=117.9
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+-..++..+++++.++++.+.+ ||+.|.|++||+ +++...++++++|+++ ++++.++.+.+
T Consensus 135 p~~~~~g~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~ 199 (359)
T 1mdl_A 135 QAYDSHSLDGVKLATERAVTAAELGFRAVKTRIGYP---------------ALDQDLAVVRSIRQAVGDDFGIMVDYNQS 199 (359)
T ss_dssp EEEEECCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeeeecCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 44444333678899888887765 999999999873 4678889999999987 68999999989
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
|+.++++++++.++++|+++|. +. ..+.+|+..+++++.+++||++.+.+.|+++++++++...+|.|++..
T Consensus 200 ~~~~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~ 271 (359)
T 1mdl_A 200 LDVPAAIKRSQALQQEGVTWIE-------EP-TLQHDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDA 271 (359)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEE-------CC-SCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBT
T ss_pred CCHHHHHHHHHHHHHhCCCeEE-------CC-CChhhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecc
Confidence 9999999999999999999872 32 245689999999999999999999999999999999877799999987
Q ss_pred chhcCcc
Q 020428 234 GALWNAS 240 (326)
Q Consensus 234 ~~l~~P~ 240 (326)
+-++..+
T Consensus 272 ~~~GGi~ 278 (359)
T 1mdl_A 272 MKIGGVT 278 (359)
T ss_dssp TTTTHHH
T ss_pred hhhCCHH
Confidence 6655544
No 83
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=99.20 E-value=2.2e-10 Score=108.59 Aligned_cols=135 Identities=15% Similarity=0.162 Sum_probs=116.7
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~ 162 (326)
+++++.+.|+.+.+ ||+.|.|++||+ +++...++++++|+++ ++++.++.+.+|+.++++++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~ 210 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP---------------DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRA 210 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 79999888887765 999999999984 4677889999999987 68999999999999999999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccc
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIF 242 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf 242 (326)
++.++++|+++|. +. ..+.+|+..+++++.+++||++.+.+.|+++++++++...+|.|++..+-++.++-+
T Consensus 211 ~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 282 (371)
T 2ovl_A 211 ARALAPFDLHWIE-------EP-TIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTF 282 (371)
T ss_dssp HHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHH
T ss_pred HHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHH
Confidence 9999999999873 33 245689999999999999999999999999999999877899999988777666544
Q ss_pred c
Q 020428 243 S 243 (326)
Q Consensus 243 ~ 243 (326)
.
T Consensus 283 ~ 283 (371)
T 2ovl_A 283 R 283 (371)
T ss_dssp H
T ss_pred H
Confidence 3
No 84
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=99.18 E-value=2.8e-10 Score=108.19 Aligned_cols=137 Identities=13% Similarity=0.020 Sum_probs=115.6
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+...++..+++++.++|+.+.+ ||+.|+|++|+ +++...++++++|+++ ++++.++.+.+
T Consensus 136 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~d~~l~vDan~~ 199 (379)
T 2rdx_A 136 PMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA----------------DWQSDIDRIRACLPLLEPGEKAMADANQG 199 (379)
T ss_dssp EBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHGGGSCTTCEEEEECTTC
T ss_pred eEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCC
Confidence 33333444678999888887765 99999999886 4688899999999998 58999999989
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
|+.++++++++.++++|+ +|. +.. + +++..+++++.+++||++.+.++|+++++++++...+|.|++-.
T Consensus 200 ~~~~~a~~~~~~l~~~~i-~iE-------~P~--~-~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~ 268 (379)
T 2rdx_A 200 WRVDNAIRLARATRDLDY-ILE-------QPC--R-SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKI 268 (379)
T ss_dssp SCHHHHHHHHHHTTTSCC-EEE-------CCS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEET
T ss_pred CCHHHHHHHHHHHHhCCe-EEe-------CCc--C-CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 999999999999999999 762 332 2 89999999999999999999999999999999877899999987
Q ss_pred chhcCcc
Q 020428 234 GALWNAS 240 (326)
Q Consensus 234 ~~l~~P~ 240 (326)
+-.+.++
T Consensus 269 ~~~GGit 275 (379)
T 2rdx_A 269 SNLGGLS 275 (379)
T ss_dssp TTTTSHH
T ss_pred cccCCHH
Confidence 7666554
No 85
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.17 E-value=1.1e-10 Score=114.95 Aligned_cols=130 Identities=20% Similarity=0.179 Sum_probs=96.8
Q ss_pred HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHH
Q 020428 87 AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARR 165 (326)
Q Consensus 87 ~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~ 165 (326)
.+.+.++..++..|+|.|.|+..+|. ++.+.++++++++.. ++||.++.- .+.+.++.
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g~---------------~~~v~~~i~~i~~~~~~~~vi~g~v------~t~e~a~~ 313 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHGH---------------SQGVIDKVKEVRAKYPSLNIIAGNV------ATAEATKA 313 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCTT---------------SHHHHHHHHHHHHHCTTSEEEEEEE------CSHHHHHH
T ss_pred cchHHHHHHHHhhccceEEecccccc---------------hhhhhhHHHHHHHhCCCceEEeeee------ccHHHHHH
Confidence 34455555555559999999987663 345778899998887 478887642 24567899
Q ss_pred HHHcCCcEEEEeecccC-------CCCCCcCCHHHHHHHHH---hcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 166 IEKTGVSALAVHGRKVA-------DRPRDPAKWGEIADIVA---ALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 166 l~~~G~d~i~vh~r~~~-------~~~~~~~~~~~i~~i~~---~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+.++|+|+|.+ |.... ....+.+++..+.++++ .+++|||+.|||.+++|+.+++ ..|||+||+||++
T Consensus 314 ~~~aGad~i~v-g~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal-a~GA~~V~vGs~~ 391 (511)
T 3usb_A 314 LIEAGANVVKV-GIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKAL-AAGAHVVMLGSMF 391 (511)
T ss_dssp HHHHTCSEEEE-CSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESTTT
T ss_pred HHHhCCCEEEE-CCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHH-HhCchhheecHHH
Confidence 99999999998 22211 11234567777776654 4579999999999999999999 5899999999998
Q ss_pred hcCc
Q 020428 236 LWNA 239 (326)
Q Consensus 236 l~~P 239 (326)
+...
T Consensus 392 ~~~~ 395 (511)
T 3usb_A 392 AGVA 395 (511)
T ss_dssp TTBT
T ss_pred hcCc
Confidence 8643
No 86
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=99.16 E-value=2.3e-10 Score=104.69 Aligned_cols=206 Identities=16% Similarity=0.070 Sum_probs=138.0
Q ss_pred cCCCCHHHHHHHHHcCCCeEEeCce--ecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE---CCCCH
Q 020428 13 VRVGTLPFRLLAAQYGADITYGEEI--IDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM---GTSDA 87 (326)
Q Consensus 13 ~g~t~~~fr~~~~~~G~~l~~te~i--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl---~g~~~ 87 (326)
.+.-|....+++.+.|.+.+++.-. +...+.+ .+.+...+.+. ....-......+.|+++.+ +|.++
T Consensus 22 ~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~~~G~------pD~~~vt~~em--~~~~~~I~~~~~~PviaD~d~Gyg~~~ 93 (295)
T 1xg4_A 22 VGTINANHALLAQRAGYQAIYLSGGGVAAGSLGL------PDLGISTLDDV--LTDIRRITDVCSLPLLVDADIGFGSSA 93 (295)
T ss_dssp EECSSHHHHHHHHHTTCSCEEECHHHHHHTTTCC------CSSSCSCHHHH--HHHHHHHHHHCCSCEEEECTTCSSSSH
T ss_pred ecCcCHHHHHHHHHcCCCEEEECchHhhhhhcCC------CCCCCCCHHHH--HHHHHHHHhhCCCCEEecCCcccCCCH
Confidence 4667999999999999987775422 2112211 11111110000 0000111122345899999 66689
Q ss_pred HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC----ChHHHHHH
Q 020428 88 VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK----SSQDTVEL 162 (326)
Q Consensus 88 ~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~----~~~~~~e~ 162 (326)
+...+.++.+.+ |+++|.|+-+| .++++....|..|....+.+..|-.++....+.++.+.-|... ..+++++-
T Consensus 94 ~~~~~~v~~l~~aGa~gv~iEd~~-~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~r 172 (295)
T 1xg4_A 94 FNVARTVKSMIKAGAAGLHIEDQV-GAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIER 172 (295)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBC-SSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEECCCC-CCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHH
Confidence 999999988877 99999999998 3444544445557665566666555555555677888888742 23689999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCC--CCHHHHHHHHHhcCCcEEEeccchh
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDV--FEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI--~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
++.++++|+|.|.+++.+ +++.++++.+.+++|+++|.-. .++..-.+-+++.|++.|++|.+++
T Consensus 173 a~ay~eAGAd~i~~e~~~---------~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~~ 239 (295)
T 1xg4_A 173 AQAYVEAGAEMLFPEAIT---------ELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVAMALYPLSAF 239 (295)
T ss_dssp HHHHHHTTCSEEEETTCC---------SHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHHH
T ss_pred HHHHHHcCCCEEEEeCCC---------CHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHHH
Confidence 999999999999998752 6899999999999999988764 2222222334479999999998755
No 87
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=99.15 E-value=1.2e-09 Score=98.76 Aligned_cols=199 Identities=16% Similarity=0.112 Sum_probs=120.4
Q ss_pred CCCCceEEccccCCCCH-HHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTL-PFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~-~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
+++||++++. +|+.+. .+.....+.|++++-..+ + +... ...+.. + +++..++.+.+++.
T Consensus 10 ~~~~~~~~~t-~g~p~~~~~~~~l~~~Gad~ielg~--p----r~~~---~g~~~~--------~-~~~~l~~~~~~~~p 70 (264)
T 1xm3_A 10 SFQSRLLLGT-GKYPSFDIQKEAVAVSESDILTFAV--R----RMNI---FEASQP--------N-FLEQLDLSKYTLLP 70 (264)
T ss_dssp EESCCEEEEC-SCSSCHHHHHHHHHHHTCSEEEEET--T----SSTT---C----------------CTTCCGGGSEEEE
T ss_pred EecCCCEEEe-cCCCCHHHHHHHHHHcCCeEEEEcc--c----cccc---CCCCHH--------H-HHHHHHhcCCeEcC
Confidence 6899999986 677664 445566666999884332 1 1000 000000 1 22223333346777
Q ss_pred EECC-CCHHHHHHHHHHhhc--CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCC
Q 020428 81 QMGT-SDAVRALTAAKMVCK--DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKS 155 (326)
Q Consensus 81 Ql~g-~~~~~~~~aa~~~~~--~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~ 155 (326)
|..+ .++++..+.++.+.+ +.+.|.++.- |.. ..+ ++...++++.+++.+ ++.+..-.- .+
T Consensus 71 n~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~-~d~--------~~~---~~e~~~~~~~a~~~~~~g~~vi~~~~--~~ 136 (264)
T 1xm3_A 71 NTAGASTAEEAVRIARLAKASGLCDMIKVEVI-GCS--------RSL---LPDPVETLKASEQLLEEGFIVLPYTS--DD 136 (264)
T ss_dssp ECTTCSSHHHHHHHHHHHHHTTCCSSEEECCB-CCT--------TTC---CBCHHHHHHHHHHHHHTTCCEEEEEC--SC
T ss_pred CccccCCHHHHHHHHHHHHHcCCCCeEEEeec-CCC--------ccc---ccchHHHHHHHHHHHCCCeEEEEEcC--CC
Confidence 8866 678876666666655 4566776641 100 001 123445566665543 333332111 22
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 156 SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
.+.++.+.+.|+|+|...+...... .+..+++.++.+++..++||++.|||.|++|+.+++ ..|||+|+||+++
T Consensus 137 ----~~~a~~~~~~gad~v~~~~~~~Gt~-~~~~~~~~l~~i~~~~~iPviv~gGI~t~eda~~~~-~~GAdgViVGSAi 210 (264)
T 1xm3_A 137 ----VVLARKLEELGVHAIMPGASPIGSG-QGILNPLNLSFIIEQAKVPVIVDAGIGSPKDAAYAM-ELGADGVLLNTAV 210 (264)
T ss_dssp ----HHHHHHHHHHTCSCBEECSSSTTCC-CCCSCHHHHHHHHHHCSSCBEEESCCCSHHHHHHHH-HTTCSEEEESHHH
T ss_pred ----HHHHHHHHHhCCCEEEECCcccCCC-CCCCCHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEEcHHH
Confidence 2467888899999994323221111 233458889999998899999999999999999999 6999999999997
Q ss_pred hcCc
Q 020428 236 LWNA 239 (326)
Q Consensus 236 l~~P 239 (326)
+..+
T Consensus 211 ~~a~ 214 (264)
T 1xm3_A 211 SGAD 214 (264)
T ss_dssp HTSS
T ss_pred hCCC
Confidence 7543
No 88
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.15 E-value=2e-10 Score=112.97 Aligned_cols=132 Identities=22% Similarity=0.242 Sum_probs=96.0
Q ss_pred HHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHH
Q 020428 90 ALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIE 167 (326)
Q Consensus 90 ~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~ 167 (326)
+.+.+..+.+ |+|.|.++++. | +++...++++++++.+ ++||.++.- . +.+.++.+.
T Consensus 238 ~~~~a~~l~~aGvd~v~i~~~~----------G-----~~~~~~e~i~~i~~~~p~~pvi~g~~--~----t~e~a~~l~ 296 (494)
T 1vrd_A 238 TMERVEKLVKAGVDVIVIDTAH----------G-----HSRRVIETLEMIKADYPDLPVVAGNV--A----TPEGTEALI 296 (494)
T ss_dssp HHHHHHHHHHTTCSEEEECCSC----------C-----SSHHHHHHHHHHHHHCTTSCEEEEEE--C----SHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEEecC----------C-----chHHHHHHHHHHHHHCCCceEEeCCc--C----CHHHHHHHH
Confidence 3444554444 99999997641 1 3456778899999988 799988642 2 245568889
Q ss_pred HcCCcEEEEeecccC------CCCCCcCCHHHHHHHHHh---cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 168 KTGVSALAVHGRKVA------DRPRDPAKWGEIADIVAA---LSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 168 ~~G~d~i~vh~r~~~------~~~~~~~~~~~i~~i~~~---~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
++|+|+|.+.+.... ....+.+.+..+..+++. +++|||+.|||.+++|+.+++ ..|||+|++||+++.+
T Consensus 297 ~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kal-a~GAd~V~iGr~~l~~ 375 (494)
T 1vrd_A 297 KAGADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKAL-AAGAESVMVGSIFAGT 375 (494)
T ss_dssp HTTCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTB
T ss_pred HcCCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHHHhcC
Confidence 999999999432110 001134456666666554 689999999999999999999 5899999999999988
Q ss_pred ccccc
Q 020428 239 ASIFS 243 (326)
Q Consensus 239 P~lf~ 243 (326)
|....
T Consensus 376 ~e~~~ 380 (494)
T 1vrd_A 376 EEAPG 380 (494)
T ss_dssp TTSSS
T ss_pred CcCCc
Confidence 77644
No 89
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=99.14 E-value=4.7e-10 Score=106.95 Aligned_cols=139 Identities=8% Similarity=0.003 Sum_probs=115.9
Q ss_pred cEEEEEC-CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMG-TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+-..++ ..+++++.++|+.+.+ ||+.|+|++|| .+++. .++++++|+++ ++++.++...
T Consensus 154 p~~~~~g~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~-~e~v~avr~a~g~d~~l~vDan~ 217 (388)
T 2nql_A 154 PAYVSGLPERTLKARGELAKYWQDRGFNAFKFATPV---------------ADDGP-AAEIANLRQVLGPQAKIAADMHW 217 (388)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHTTCCEEEEEGGG---------------CTTCH-HHHHHHHHHHHCTTSEEEEECCS
T ss_pred EeeEEeCCCCCHHHHHHHHHHHHHhCCCEEEEeCCC---------------CChHH-HHHHHHHHHHhCCCCEEEEECCC
Confidence 4444443 3689999988887765 99999999875 24667 89999999987 6899999988
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.++++++++.++++|+++|. +. ..+.+|+..+++++.+++||++.+.+.|+++++++++...+|.|++-
T Consensus 218 ~~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 289 (388)
T 2nql_A 218 NQTPERALELIAEMQPFDPWFAE-------AP-VWTEDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPE 289 (388)
T ss_dssp CSCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCC
T ss_pred CCCHHHHHHHHHHHhhcCCCEEE-------CC-CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEec
Confidence 99999999999999999999873 32 24568999999999999999999999999999999976779999997
Q ss_pred cchhcCcc
Q 020428 233 RGALWNAS 240 (326)
Q Consensus 233 r~~l~~P~ 240 (326)
..- +.++
T Consensus 290 ~~~-GGit 296 (388)
T 2nql_A 290 MGH-KGIT 296 (388)
T ss_dssp HHH-HCHH
T ss_pred CCC-CCHH
Confidence 665 5543
No 90
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=99.13 E-value=7.4e-10 Score=105.25 Aligned_cols=141 Identities=10% Similarity=0.076 Sum_probs=119.0
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
.|+...++..+++.+.+.++.+.+ ||+.|.+++||| +++...++++++|+++ ++++.++.+.
T Consensus 135 v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 199 (378)
T 2qdd_A 135 VPINSSISTGTPDQMLGLIAEAAAQGYRTHSAKIGGS---------------DPAQDIARIEAISAGLPDGHRVTFDVNR 199 (378)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHSCCTTCEEEEECTT
T ss_pred CceEEEecCCCHHHHHHHHHHHHHHhhhheeecCCCC---------------ChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 355555656789999888887765 999999999986 4678889999999988 6889999988
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.++++++++.++ +|+ +| ++.. + +|+..+++++.+++||++.+.+.|+++++++++...+|.|++-
T Consensus 200 ~~~~~~a~~~~~~l~-~~i-~i-------EqP~--~-d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik 267 (378)
T 2qdd_A 200 AWTPAIAVEVLNSVR-ARD-WI-------EQPC--Q-TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIK 267 (378)
T ss_dssp CCCHHHHHHHHTSCC-CCC-EE-------ECCS--S-SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CCCHHHHHHHHHHhC-CCc-EE-------EcCC--C-CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEec
Confidence 999999999999998 998 76 2333 2 8999999999999999999999999999999987789999998
Q ss_pred cchhcCccccc
Q 020428 233 RGALWNASIFS 243 (326)
Q Consensus 233 r~~l~~P~lf~ 243 (326)
.+-++.++-+.
T Consensus 268 ~~~~GGi~~~~ 278 (378)
T 2qdd_A 268 PNRVGGLTRAR 278 (378)
T ss_dssp HHHHTSHHHHH
T ss_pred ccccCCHHHHH
Confidence 87777665433
No 91
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=99.12 E-value=2.7e-09 Score=101.47 Aligned_cols=138 Identities=13% Similarity=0.101 Sum_probs=116.8
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
.+++++.+.|+.+.+ ||+.|.|++||+.. | ...+++...++++++|+++ ++++.++...+|+.+++++
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~-------~--~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~ 218 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPV-------S--WAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALA 218 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTS-------T--TCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCcc-------c--cccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 689999888887765 99999999998642 2 3458899999999999987 6889999988999999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCC-HHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFE-YDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s-~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+++.++++|+++|. +. ..+.+++..+++++.+++||++.+.+.| +++++++++...+|.|++--.-.+..
T Consensus 219 ~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 289 (382)
T 1rvk_A 219 LGRGLEKLGFDWIE-------EP-MDEQSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGI 289 (382)
T ss_dssp HHHHHHTTTCSEEE-------CC-SCTTCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSH
T ss_pred HHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCH
Confidence 99999999999873 22 2356899999999999999999999999 99999999777799999965544443
No 92
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=99.11 E-value=4.9e-11 Score=106.35 Aligned_cols=96 Identities=14% Similarity=0.190 Sum_probs=82.2
Q ss_pred EEEEecCCCCh------HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHH
Q 020428 146 VTCKIRLLKSS------QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQR 219 (326)
Q Consensus 146 v~vK~r~g~~~------~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~ 219 (326)
..||++.||.. .++.++++.++++|+|.|++++++..+.. .+.+++.+++++ .+++||+++|||.+.+++.+
T Consensus 13 ~~vk~~~G~~~~~~~~~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~-~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~~~~~ 90 (241)
T 1qo2_A 13 KVARMIKGRKENTIFYEKDPVELVEKLIEEGFTLIHVVDLSNAIEN-SGENLPVLEKLS-EFAEHIQIGGGIRSLDYAEK 90 (241)
T ss_dssp EEEEEGGGCGGGEEEESSCHHHHHHHHHHTTCCCEEEEEHHHHHHC-CCTTHHHHHHGG-GGGGGEEEESSCCSHHHHHH
T ss_pred EEEEEeccccccceecCcCHHHHHHHHHHcCCCEEEEecccccccC-CchhHHHHHHHH-hcCCcEEEECCCCCHHHHHH
Confidence 56788887632 46899999999999999999988664332 356799999999 88999999999999999999
Q ss_pred HHHhcCCcEEEeccchhcCcccccc
Q 020428 220 IKTAAGASSVMAARGALWNASIFSS 244 (326)
Q Consensus 220 ~l~~~Gad~VmiGr~~l~~P~lf~~ 244 (326)
++ ..|||+|++|++++.+|+++.+
T Consensus 91 ~~-~~Gad~V~lg~~~l~~p~~~~~ 114 (241)
T 1qo2_A 91 LR-KLGYRRQIVSSKVLEDPSFLKS 114 (241)
T ss_dssp HH-HTTCCEEEECHHHHHCTTHHHH
T ss_pred HH-HCCCCEEEECchHhhChHHHHH
Confidence 99 5899999999999999997654
No 93
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=99.11 E-value=5.6e-10 Score=106.12 Aligned_cols=141 Identities=13% Similarity=0.060 Sum_probs=120.1
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
.|+..++++.+|+.+.+.++.+.+ |+..|.+++|| +++.-.+.++++|+++ ++++.++.+.
T Consensus 135 v~~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiK~G~----------------~~~~d~~~v~avR~a~g~~~~l~vDan~ 198 (378)
T 3eez_A 135 RPIASSVGAKSVEETRAVIDRYRQRGYVAHSVKIGG----------------DVERDIARIRDVEDIREPGEIVLYDVNR 198 (378)
T ss_dssp EEBBCCBCSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHTTSCCTTCEEEEECTT
T ss_pred EEEEEEecCCCHHHHHHHHHHHHhCCCCEEEeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEECCC
Confidence 456667788899999988887655 99999999987 3677788999999998 6899999999
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.++++++++.+++.|+ +|. +.. .+++.++++++.+++||++++.+.|++++.++++..++|.|++.
T Consensus 199 ~~~~~~a~~~~~~l~~~~i-~iE-------qP~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik 267 (378)
T 3eez_A 199 GWTRQQALRVMRATEDLHV-MFE-------QPG---ETLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIK 267 (378)
T ss_dssp CCCHHHHHHHHHHTGGGTC-CEE-------CCS---SSHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEE
T ss_pred CCCHHHHHHHHHHhccCCe-EEe-------cCC---CCHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999998 762 322 28999999999999999999999999999999977779999999
Q ss_pred cchhcCccccc
Q 020428 233 RGALWNASIFS 243 (326)
Q Consensus 233 r~~l~~P~lf~ 243 (326)
.+-.+.++-+.
T Consensus 268 ~~~~GGit~~~ 278 (378)
T 3eez_A 268 LNRVGGLTRAA 278 (378)
T ss_dssp HHHHTSHHHHH
T ss_pred chhcCCHHHHH
Confidence 88777765443
No 94
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=99.10 E-value=9.5e-10 Score=104.11 Aligned_cols=141 Identities=9% Similarity=0.096 Sum_probs=119.7
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
.|+..++++.+++++.+.++.+.+ ||+.|.|++|+ +++...++++++|+++ ++++.++.+.
T Consensus 131 v~~~~~i~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 194 (369)
T 2p8b_A 131 FPVTHVLSIADPENMAEEAASMIQKGYQSFKMKVGT----------------NVKEDVKRIEAVRERVGNDIAIRVDVNQ 194 (369)
T ss_dssp EECCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred eeeeEEecCCChHHHHHHHHHHHHcCcCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCC
Confidence 355567788899999888887765 99999999873 4788889999999987 6889999888
Q ss_pred CCChHHHH-HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 153 LKSSQDTV-ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 153 g~~~~~~~-e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+|+.++++ ++++.++++|+++|. +.. .+.+|+..+++++.+++||++.+.+++++++.++++...+|+|++
T Consensus 195 ~~~~~~a~~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 266 (369)
T 2p8b_A 195 GWKNSANTLTALRSLGHLNIDWIE-------QPV-IADDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNI 266 (369)
T ss_dssp TTBSHHHHHHHHHTSTTSCCSCEE-------CCB-CTTCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEe
Confidence 89999999 999999999999874 332 456899999999999999999999999999999998778999999
Q ss_pred ccchhcCcc
Q 020428 232 ARGALWNAS 240 (326)
Q Consensus 232 Gr~~l~~P~ 240 (326)
-.+-++..+
T Consensus 267 k~~~~GGit 275 (369)
T 2p8b_A 267 KLMKCGGIY 275 (369)
T ss_dssp CHHHHTSHH
T ss_pred ecchhCCHH
Confidence 876665554
No 95
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=99.08 E-value=2.5e-09 Score=102.35 Aligned_cols=145 Identities=11% Similarity=0.113 Sum_probs=119.9
Q ss_pred CcEEEEEC-CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCCh-HHHHHHHHHHhhcc--cCcEEEEe
Q 020428 76 NHVVFQMG-TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKP-ELIHDILTMLKRNL--DVPVTCKI 150 (326)
Q Consensus 76 ~p~~vQl~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p-~~~~~iv~~v~~~~--~~pv~vK~ 150 (326)
.|+-..+. +.+++++.+.|+.+.+ ||+.|.+++ ||. |. ++ +...++++++|+++ ++++.++.
T Consensus 134 vp~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~-spv--------G~----~~~~~~~e~v~avr~a~G~d~~l~vDa 200 (401)
T 2hzg_A 134 KRPYASLLFGDTPQETLERARAARRDGFAAVKFGW-GPI--------GR----GTVAADADQIMAAREGLGPDGDLMVDV 200 (401)
T ss_dssp BEEEEEEECCSSHHHHHHHHHHHHHTTCSEEEEES-TTT--------TS----SCHHHHHHHHHHHHHHHCSSSEEEEEC
T ss_pred eEeeEEcCCCCCHHHHHHHHHHHHHhCCCeEEEcC-CCC--------CC----CHHHHHHHHHHHHHHHhCCCCeEEEEC
Confidence 35554443 6789999988887765 999999996 664 22 45 77889999999987 68999999
Q ss_pred cCCC--ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHH-hcCCcEEEeCCCCCHHHHHHHHHhcCCc
Q 020428 151 RLLK--SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVA-ALSIPVIANGDVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 151 r~g~--~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~-~~~iPVi~nGgI~s~~d~~~~l~~~Gad 227 (326)
..+| +.++++++++.++++|+++|- +.. .+.+|+..+++++ .+++||++.+.+.|+++++++++...+|
T Consensus 201 n~~~~~~~~~a~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d 272 (401)
T 2hzg_A 201 GQIFGEDVEAAAARLPTLDAAGVLWLE-------EPF-DAGALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIG 272 (401)
T ss_dssp TTTTTTCHHHHHTTHHHHHHTTCSEEE-------CCS-CTTCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCS
T ss_pred CCCCCCCHHHHHHHHHHHHhcCCCEEE-------CCC-CccCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCC
Confidence 9899 999999999999999999873 322 4568999999999 8999999999999999999999877899
Q ss_pred EEEeccchhcCccc
Q 020428 228 SVMAARGALWNASI 241 (326)
Q Consensus 228 ~VmiGr~~l~~P~l 241 (326)
.|++-..-++.++-
T Consensus 273 ~v~ik~~~~GGit~ 286 (401)
T 2hzg_A 273 FIQIDCGRIGGLGP 286 (401)
T ss_dssp EEEECHHHHTSHHH
T ss_pred EEEeCcchhCCHHH
Confidence 99998776666543
No 96
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=99.07 E-value=2.6e-09 Score=95.44 Aligned_cols=142 Identities=14% Similarity=0.144 Sum_probs=103.9
Q ss_pred cEEEEECC--CCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecC-
Q 020428 77 HVVFQMGT--SDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRL- 152 (326)
Q Consensus 77 p~~vQl~g--~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~- 152 (326)
++-+|++| .+.++. .+++..|++-|-|| +..+++|+++.++.+..-+.. -+.+.+|.+-
T Consensus 75 ~~pl~vGGGIrs~e~~---~~~l~~GadkVii~--------------t~a~~~p~li~e~~~~~g~q~iv~~iD~~~~~~ 137 (243)
T 4gj1_A 75 SVNLQVGGGIRSKEEV---KALLDCGVKRVVIG--------------SMAIKDATLCLEILKEFGSEAIVLALDTILKED 137 (243)
T ss_dssp CSEEEEESSCCCHHHH---HHHHHTTCSEEEEC--------------TTTTTCHHHHHHHHHHHCTTTEEEEEEEEESSS
T ss_pred CCCeEeccccccHHHH---HHHHHcCCCEEEEc--------------cccccCCchHHHHHhcccCceEEEEEEEEeCCC
Confidence 45678865 344433 34555699988876 567899999999998885442 3334443322
Q ss_pred ------CCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHH
Q 020428 153 ------LKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKT 222 (326)
Q Consensus 153 ------g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~ 222 (326)
+|.. .+..++++.+++.|+..|.++...+++...|+ |+++++++.+.+ ++|||++||+.+.+|+.++.
T Consensus 138 ~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t~Id~DGt~~G~-d~~l~~~l~~~~~~ipviasGGv~~~~Dl~~l~- 215 (243)
T 4gj1_A 138 YVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCTDISKDGTMQGV-NVRLYKLIHEIFPNICIQASGGVASLKDLENLK- 215 (243)
T ss_dssp EEEC--------CCBHHHHHHHHHTTTCCEEEEEETTC-----CC-CHHHHHHHHHHCTTSEEEEESCCCSHHHHHHTT-
T ss_pred CEEEecCceecccchHHHHHHHHhhcCCcEEEeeeecccccccCC-CHHHHHHHHHhcCCCCEEEEcCCCCHHHHHHHH-
Confidence 3432 35789999999999999999999999887666 899999999886 69999999999999998863
Q ss_pred hcCCcEEEeccchhcC
Q 020428 223 AAGASSVMAARGALWN 238 (326)
Q Consensus 223 ~~Gad~VmiGr~~l~~ 238 (326)
.+++||.+|++++.+
T Consensus 216 -~~~~gvivg~Al~~g 230 (243)
T 4gj1_A 216 -GICSGVIVGKALLDG 230 (243)
T ss_dssp -TTCSEEEECHHHHTT
T ss_pred -ccCchhehHHHHHCC
Confidence 579999999997654
No 97
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=99.07 E-value=3e-09 Score=101.43 Aligned_cols=139 Identities=9% Similarity=0.080 Sum_probs=118.0
Q ss_pred CcEEEEE-C-CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEe
Q 020428 76 NHVVFQM-G-TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKI 150 (326)
Q Consensus 76 ~p~~vQl-~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~ 150 (326)
.|+-..+ . +.+++++.+.++.+.+ ||..|.|++|| +++.-.++++++|+++ ++++.++.
T Consensus 139 v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG~----------------~~~~d~~~v~avR~a~g~d~~l~vDa 202 (389)
T 3ozy_A 139 VRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVGR----------------APRKDAANLRAMRQRVGADVEILVDA 202 (389)
T ss_dssp EEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred eeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccCC----------------CHHHHHHHHHHHHHHcCCCceEEEEC
Confidence 4666666 4 6889999988887655 99999999987 4778888999999987 68999999
Q ss_pred cCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHH-HhcCCcEEEeCCCCCHHHHHHHHHhcCCcEE
Q 020428 151 RLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIV-AALSIPVIANGDVFEYDDFQRIKTAAGASSV 229 (326)
Q Consensus 151 r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~-~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~V 229 (326)
+.+|+.++++++++.+++.|+++|. +. ..+.+++.+++++ +.+++||++.+.+.|++++.++++...+|.|
T Consensus 203 n~~~~~~~A~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v 274 (389)
T 3ozy_A 203 NQSLGRHDALAMLRILDEAGCYWFE-------EP-LSIDDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVL 274 (389)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCSEEE-------SC-SCTTCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEE
T ss_pred CCCcCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEE
Confidence 9999999999999999999999984 22 2456899999999 9999999999999999999999977779999
Q ss_pred EeccchhcC
Q 020428 230 MAARGALWN 238 (326)
Q Consensus 230 miGr~~l~~ 238 (326)
++--+-.+.
T Consensus 275 ~ik~~~~GG 283 (389)
T 3ozy_A 275 QADASRAGG 283 (389)
T ss_dssp CCCTTTSSC
T ss_pred EeCccccCC
Confidence 987554444
No 98
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=99.05 E-value=3.1e-09 Score=94.90 Aligned_cols=155 Identities=14% Similarity=0.090 Sum_probs=111.0
Q ss_pred cEEEEECCCCH--HHHHHHHHHhhcCCCEEEEc--cCCCccccccccc-cc-----c--ccCChHHHHHHHHHHhhcccC
Q 020428 77 HVVFQMGTSDA--VRALTAAKMVCKDVAAIDIN--MGCPKSFSVSGGM-GA-----A--LLSKPELIHDILTMLKRNLDV 144 (326)
Q Consensus 77 p~~vQl~g~~~--~~~~~aa~~~~~~~d~idlN--~gcP~~~~~~~~~-G~-----~--l~~~p~~~~~iv~~v~~~~~~ 144 (326)
.++..|.+.+| +.+.+.++.+.+++|.|+++ ++||.-. |. -. + --.+.....++++++++.+++
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~~ad~iel~~p~sdp~~D----G~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~ 81 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDEYAGAIELGIPFSDPIAD----GKTIQESHYRALKNGFKLREAFWIVKEFRRHSST 81 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGGBSCEEEECCCSCCTTS----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEECCCCCCCCCC----CHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCC
Confidence 58889988777 58888888776558988888 6676541 10 00 0 002667778999999998889
Q ss_pred cEEEEecCCCCh---HHHHHHHHHHHHcCCcEEEEeeccc---------------------C---------------C--
Q 020428 145 PVTCKIRLLKSS---QDTVELARRIEKTGVSALAVHGRKV---------------------A---------------D-- 183 (326)
Q Consensus 145 pv~vK~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~---------------------~---------------~-- 183 (326)
||.+.... ++ ....+.++.+.++|+|+|++|.-.. . .
T Consensus 82 pv~~~~~~--~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~t~~e~~~~~~~~~d~~ 159 (248)
T 1geq_A 82 PIVLMTYY--NPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGF 159 (248)
T ss_dssp CEEEEECH--HHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHHHCSSE
T ss_pred CEEEEecc--chhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHHHHHHHHhCCCeEEEECCCCHHHHHHHHHhcCCCe
Confidence 98876531 11 1125788888889999999874110 0 0
Q ss_pred -------CCCC------cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 184 -------RPRD------PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 184 -------~~~~------~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
...+ +..++.++++++.+++||++.|||++++++.+++ ..|||+|.+|++++..
T Consensus 160 i~~~~~~G~~g~~~~~~~~~~~~i~~l~~~~~~pi~~~GGI~~~e~i~~~~-~~Gad~vivGsai~~~ 226 (248)
T 1geq_A 160 VYLVSLYGTTGAREEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLL-KEGANGVVVGSALVKI 226 (248)
T ss_dssp EEEECCC-------CCCHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred EEEEECCccCCCCCCCChhHHHHHHHHHhhcCCCEEEEeecCCHHHHHHHH-HcCCCEEEEcHHHHhh
Confidence 0011 1235678889988899999999999999999998 5899999999998865
No 99
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=99.05 E-value=5e-09 Score=99.04 Aligned_cols=140 Identities=11% Similarity=0.133 Sum_probs=116.8
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+-..+++.+++++.+.++.+.+ ||+.|.+++||+ +++...++++++|+++ ++++.++...+
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~d~~~v~avr~a~g~~~~l~vDan~~ 195 (366)
T 1tkk_A 131 ETDYTVSVNSPEEMAADAENYLKQGFQTLKIKVGKD---------------DIATDIARIQEIRKRVGSAVKLRLDANQG 195 (366)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHTCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 44456777789999888877655 999999998872 4677888999999987 68899999889
Q ss_pred CChHHHHHHHHHHHH--cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 154 KSSQDTVELARRIEK--TGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~--~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
|+.++++++++.+++ .|+++|- +. ..+.+|+..+++++.+++||++.+.+++++++.++++...+|.|++
T Consensus 196 ~~~~~a~~~~~~l~~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 267 (366)
T 1tkk_A 196 WRPKEAVTAIRKMEDAGLGIELVE-------QP-VHKDDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINI 267 (366)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHhhcCCCceEEE-------CC-CCcccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEe
Confidence 999999999999999 8888873 33 2456899999999999999999999999999999998777999999
Q ss_pred ccchhcCc
Q 020428 232 ARGALWNA 239 (326)
Q Consensus 232 Gr~~l~~P 239 (326)
--.-.+..
T Consensus 268 k~~~~GGi 275 (366)
T 1tkk_A 268 KLMKAGGI 275 (366)
T ss_dssp CHHHHTSH
T ss_pred ehhhhcCH
Confidence 75544443
No 100
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.05 E-value=6e-09 Score=111.86 Aligned_cols=109 Identities=13% Similarity=0.058 Sum_probs=85.5
Q ss_pred CChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCC--------CCCcCCHHHHHH
Q 020428 126 SKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADR--------PRDPAKWGEIAD 196 (326)
Q Consensus 126 ~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~--------~~~~~~~~~i~~ 196 (326)
.+++.+.++++.+++.. ++||.+|+-... ...+.|+.+.++|+|+|+|.|...... ..+.+....+.+
T Consensus 1010 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~---gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~~~~~GlPt~~aL~e 1086 (1520)
T 1ofd_A 1010 YSIEDLAQLIYDLHQINPEAQVSVKLVAEI---GIGTIAAGVAKANADIIQISGHDGGTGASPLSSIKHAGSPWELGVTE 1086 (1520)
T ss_dssp SSHHHHHHHHHHHHHHCTTSEEEEEEECST---THHHHHHHHHHTTCSEEEEECTTCCCSSEEHHHHHHBCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEecCCC---ChHHHHHHHHHcCCCEEEEeCCCCccCCCcchhhcCCchhHHHHHHH
Confidence 45677889999999988 899999986432 334578899999999999988753321 112233456666
Q ss_pred HHHhc-------CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 197 IVAAL-------SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 197 i~~~~-------~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+.+.+ ++|||+.|||.|..|+.+++ ..||++|++||++|..
T Consensus 1087 v~~al~~~glr~~IpVIAdGGIrtG~DVakAL-aLGAdaV~iGTafL~a 1134 (1520)
T 1ofd_A 1087 VHRVLMENQLRDRVLLRADGGLKTGWDVVMAA-LMGAEEYGFGSIAMIA 1134 (1520)
T ss_dssp HHHHHHHTTCGGGCEEEEESSCCSHHHHHHHH-HTTCSEEECSHHHHHH
T ss_pred HHHHHHhcCCCCCceEEEECCCCCHHHHHHHH-HcCCCeeEEcHHHHHH
Confidence 66644 69999999999999999999 6999999999999864
No 101
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=99.02 E-value=4.9e-09 Score=100.04 Aligned_cols=133 Identities=8% Similarity=0.103 Sum_probs=113.0
Q ss_pred CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 84 TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
+.+++++.+.|+.+.+ ||+.|.|+.|+. .++...++++++|+++ ++++.++...+|+.++++
T Consensus 147 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~---------------~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 211 (391)
T 2qgy_A 147 KKDTNDYLRQIEKFYGKKYGGIKIYPMLD---------------SLSISIQFVEKVREIVGDELPLMLDLAVPEDLDQTK 211 (391)
T ss_dssp CCCHHHHHHHHHHHHHTTCSCEEECCCCS---------------SHHHHHHHHHHHHHHHCSSSCEEEECCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------hHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCHHHHH
Confidence 5789999988887765 999999997731 1688889999999987 689999999899999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
++++.++++|+++|. +. ..+.+|+..+++++.+++||++.+.+.|+++++++++...+|.|++-..-.+..
T Consensus 212 ~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 282 (391)
T 2qgy_A 212 SFLKEVSSFNPYWIE-------EP-VDGENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGL 282 (391)
T ss_dssp HHHHHHGGGCCSEEE-------CS-SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCH
T ss_pred HHHHHHHhcCCCeEe-------CC-CChhhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCH
Confidence 999999999999873 22 235689999999999999999999999999999999777799999976555544
No 102
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=99.02 E-value=5.4e-09 Score=99.00 Aligned_cols=137 Identities=12% Similarity=0.046 Sum_probs=115.9
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
.|+...+.+.+++++.+.++.+.+ ||+.|.|++|. +++...++++++|+++ ++++.++...
T Consensus 136 vp~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~~~e~v~avr~a~g~~~~l~vDan~ 199 (371)
T 2ps2_A 136 LPLISSIYVGEPEDMRARVAKYRAKGYKGQSVKISG----------------EPVTDAKRITAALANQQPDEFFIVDANG 199 (371)
T ss_dssp EEBEEEECSCCHHHHHHHHHHHHTTTCCEEEEECCS----------------CHHHHHHHHHHHTTTCCTTCEEEEECTT
T ss_pred eEEEEEeCCCCHHHHHHHHHHHHHhChheEEeecCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 456666777899999998888766 99999999873 3778889999999988 6889999888
Q ss_pred CCChHHHHHHHHHH-HHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 153 LKSSQDTVELARRI-EKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 153 g~~~~~~~e~a~~l-~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+|+.++++++++.+ ++.|+ +|. +.. + +++..+++++.+++||++.+.++++++++++++...+|.|++
T Consensus 200 ~~~~~~a~~~~~~l~~~~~i-~iE-------~P~--~-~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~i 268 (371)
T 2ps2_A 200 KLSVETALRLLRLLPHGLDF-ALE-------APC--A-TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDL 268 (371)
T ss_dssp BCCHHHHHHHHHHSCTTCCC-EEE-------CCB--S-SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CcCHHHHHHHHHHHHhhcCC-cCc-------CCc--C-CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 89999999999999 99999 762 222 2 899999999999999999999999999999998777999999
Q ss_pred ccchhcCc
Q 020428 232 ARGALWNA 239 (326)
Q Consensus 232 Gr~~l~~P 239 (326)
--.-.+..
T Consensus 269 k~~~~GGi 276 (371)
T 2ps2_A 269 KISKAGGL 276 (371)
T ss_dssp EHHHHTSH
T ss_pred chhhcCCH
Confidence 76555444
No 103
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=99.02 E-value=9.1e-09 Score=97.35 Aligned_cols=136 Identities=10% Similarity=0.178 Sum_probs=113.0
Q ss_pred EECCCCHHHHHHHHHHh-h-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCCh
Q 020428 81 QMGTSDAVRALTAAKMV-C-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSS 156 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~-~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~ 156 (326)
-+.+.+++.+.+.++.+ . .||+.|.|++||+ +++...++++++|+++ ++++.++...+|+.
T Consensus 137 ~~~~~~~e~~~~~a~~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~ 201 (370)
T 1nu5_A 137 TLASGDTARDIDSALEMIETRRHNRFKVKLGAR---------------TPAQDLEHIRSIVKAVGDRASVRVDVNQGWDE 201 (370)
T ss_dssp EECSSCHHHHHHHHHHHHHTTSCSEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGCEEEEECTTCCCH
T ss_pred EecCCCHHHHHHHHHHHHHhCCccEEEEecCCC---------------ChHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 34556888888777765 4 5999999999875 3567788899999877 58899998889999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
++++++++.+++.|+++|. +. ..+.+|+..+++++.+++||++.+.+.+++++.++++...+|.|++--.-.
T Consensus 202 ~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~ 273 (370)
T 1nu5_A 202 QTASIWIPRLEEAGVELVE-------QP-VPRANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNM 273 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEE-------CC-SCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH
T ss_pred HHHHHHHHHHHhcCcceEe-------CC-CCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhc
Confidence 9999999999999999873 22 245689999999999999999999999999999999777799999975555
Q ss_pred cCc
Q 020428 237 WNA 239 (326)
Q Consensus 237 ~~P 239 (326)
+..
T Consensus 274 GGi 276 (370)
T 1nu5_A 274 GGI 276 (370)
T ss_dssp TSH
T ss_pred CCH
Confidence 444
No 104
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.02 E-value=3.5e-09 Score=113.39 Aligned_cols=108 Identities=15% Similarity=0.115 Sum_probs=85.1
Q ss_pred CChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCC--------CCcCCHHHHHH
Q 020428 126 SKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRP--------RDPAKWGEIAD 196 (326)
Q Consensus 126 ~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~--------~~~~~~~~i~~ 196 (326)
.+++.+.++++.+++.. ++||.+|+-... ...+.|+.+.++|+|+|+|.|....... .+.+....+.+
T Consensus 975 ~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~---gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~e 1051 (1479)
T 1ea0_A 975 YSIEDLAQLIYDLKQINPDAKVTVKLVSRS---GIGTIAAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSE 1051 (1479)
T ss_dssp SSHHHHHHHHHHHHHHCTTCEEEEEEECCT---THHHHHHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEEEcCCC---ChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHH
Confidence 34677889999999988 899999996532 3345688999999999999877533211 12233456677
Q ss_pred HHHhc-------CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 197 IVAAL-------SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 197 i~~~~-------~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+.+.+ ++|||+.|||.|..|+.+++ ..||++|++||++|.
T Consensus 1052 v~~al~~~glr~~VpVIAdGGIrtG~DVakAL-aLGAdaV~iGTafL~ 1098 (1479)
T 1ea0_A 1052 VHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAA-MLGAEEFGIGTASLI 1098 (1479)
T ss_dssp HHHHHHTTTCTTTSEEEEESSCCSHHHHHHHH-HTTCSEEECCHHHHH
T ss_pred HHHHHHHcCCCCCceEEEECCCCCHHHHHHHH-HcCCCeeeEcHHHHH
Confidence 76654 79999999999999999999 699999999999986
No 105
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=99.02 E-value=5.5e-09 Score=100.23 Aligned_cols=139 Identities=12% Similarity=0.198 Sum_probs=113.3
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEcc------CCCcc-cccccccccccc-CChHHHHHHHHHHhhcc--cCcEEEEecCCC
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINM------GCPKS-FSVSGGMGAALL-SKPELIHDILTMLKRNL--DVPVTCKIRLLK 154 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~------gcP~~-~~~~~~~G~~l~-~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~ 154 (326)
+++++.+.|+.+.+ ||+.|.|+. |++.. ...+..+|+... ++++...++++++|+++ ++++.+...-+|
T Consensus 150 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~ 229 (410)
T 2gl5_A 150 TPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHSLL 229 (410)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCC
Confidence 89999888887765 999999996 65210 111235666654 57788899999999987 688999988889
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.++++++++.++++|+++|. +. ..+.+++..+++++.+++||++.+.+.|+++++++++...+|.|++-
T Consensus 230 ~~~~ai~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 299 (410)
T 2gl5_A 230 GTNSAIQFAKAIEKYRIFLYE-------EP-IHPLNSDNMQKVSRSTTIPIATGERSYTRWGYRELLEKQSIAVAQPD 299 (410)
T ss_dssp CHHHHHHHHHHHGGGCEEEEE-------CS-SCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHHHTTCCSEECCC
T ss_pred CHHHHHHHHHHHHhcCCCeEE-------CC-CChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 999999999999999998874 22 24568999999999999999999999999999999976668999875
No 106
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=99.01 E-value=8.2e-10 Score=122.57 Aligned_cols=193 Identities=12% Similarity=0.034 Sum_probs=130.3
Q ss_pred CCceEEcccc-CCCCHHHHHHHHHcCC-CeEEe-CceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 4 QNKLVLAPMV-RVGTLPFRLLAAQYGA-DITYG-EEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 4 ~~~iilAPM~-g~t~~~fr~~~~~~G~-~l~~t-e~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
+.||++|||+ ..++..|..++.+.|. |.+.+ .+.+++.+....+.. +..-+.+.|+.|
T Consensus 589 ~~PIi~~gM~~~~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~-------------------~~~t~~~~~~gv 649 (2051)
T 2uv8_G 589 RPPLLVPGMTPCTVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSV-------------------VSQIEKGSTFGI 649 (2051)
T ss_dssp SCSEEECCCHHHHTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHH-------------------HHHSCTTCCEEE
T ss_pred ccceecCCCccccccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHH-------------------HHhcCCCCceEE
Confidence 4699999999 4559999999999986 66533 334444442211110 001122358999
Q ss_pred EECCCCHH----HHHHHHHHhh-cCCCE--EEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 81 QMGTSDAV----RALTAAKMVC-KDVAA--IDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 81 Ql~g~~~~----~~~~aa~~~~-~~~d~--idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
++.-.+|. ++ +..+.+. +|+.. |.+..|-|.. +...++++.+ ++++....
T Consensus 650 N~~~~~~~~~~~~~-~~~~~~~~~gv~i~~v~~~ag~p~~---------------~~~~~~i~~l----G~~vi~~~--- 706 (2051)
T 2uv8_G 650 NLIYVNPFMLQWGI-PLIKELRSKGYPIQFLTIGAGVPSL---------------EVASEYIETL----GLKYLGLK--- 706 (2051)
T ss_dssp EEETTCTTHHHHHH-HHHHHHHHTTCSEEEEEEESSCCCH---------------HHHHHHHHHS----CCSCEEEC---
T ss_pred EEeecChhhhhhhH-HHHHHHHHcCCCcceEEecCCCCch---------------hhHHHHHHHc----CCEEEEec---
Confidence 98655543 23 4444444 47655 8988887743 2344444444 77766533
Q ss_pred CChHHHHHHHHHHHHcCCcEE---EEeecccCCCCCC----cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHH----
Q 020428 154 KSSQDTVELARRIEKTGVSAL---AVHGRKVADRPRD----PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKT---- 222 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i---~vh~r~~~~~~~~----~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~---- 222 (326)
......+..+...+++|+|++ .+.|....++.+. ...+.++.++++.++||||+.|||.+.+++..+|.
T Consensus 707 ~~~~~a~~~~~~~~~~g~d~~ii~~~~G~eaGGH~g~~d~~~~~l~l~~~v~~~~~ipviaaGGi~dg~~~~aaL~g~w~ 786 (2051)
T 2uv8_G 707 PGSIDAISQVINIAKAHPNFPIALQWTGGRGGGHHSFEDAHTPMLQMYSKIRRHPNIMLIFGSGFGSADDTYPYLTGEWS 786 (2051)
T ss_dssp CCSHHHHHHHHHHHHHSTTSCEEEEECCSSCSEECCSCCSSHHHHHHHHHHTTCTTBCCEEESSCCSHHHHTHHHHTCGG
T ss_pred CchHHHHHHHHHHHHhCCCceeEEEEEccCcCCCCCcccccccHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHccccc
Confidence 234577788899999999993 5567776655321 12244578999999999999999999999999993
Q ss_pred ------hcCCcEEEeccchhcC
Q 020428 223 ------AAGASSVMAARGALWN 238 (326)
Q Consensus 223 ------~~Gad~VmiGr~~l~~ 238 (326)
..|||||++|+.++..
T Consensus 787 ~~~g~~~lgadGv~~GTrf~~t 808 (2051)
T 2uv8_G 787 TKFDYPPMPFDGFLFGSRVMIA 808 (2051)
T ss_dssp GTTTCCCCCCSCEECSGGGTTS
T ss_pred cccCccCCCCceeeechHHHhC
Confidence 4799999999999864
No 107
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=99.00 E-value=1.6e-09 Score=94.01 Aligned_cols=137 Identities=15% Similarity=0.157 Sum_probs=91.6
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
.|+++.+.+.+++++.+.++.+.+ |++.|+++++||.. .+.++.+++.++..+.+....-.
T Consensus 10 ~~~i~~~~~~~~~~~~~~~~~~~~~G~~~iev~~~~~~~------------------~~~i~~ir~~~~~~~~ig~~~v~ 71 (205)
T 1wa3_A 10 HKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDA------------------DTVIKELSFLKEKGAIIGAGTVT 71 (205)
T ss_dssp HCEEEEECCSSHHHHHHHHHHHHHTTCCEEEEETTSTTH------------------HHHHHHTHHHHHTTCEEEEESCC
T ss_pred CCEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCChhH------------------HHHHHHHHHHCCCCcEEEecccC
Confidence 379999999999999999998877 89999999988742 23345555443211222221111
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeeccc-------------------C-C---------------CCCCcCCHHHHHHHHH
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKV-------------------A-D---------------RPRDPAKWGEIADIVA 199 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~-------------------~-~---------------~~~~~~~~~~i~~i~~ 199 (326)
+. +.++.+.++|+|+| +++... . . .+......+.++++++
T Consensus 72 ~~----~~~~~a~~~Gad~i-v~~~~~~~~~~~~~~~g~~vi~g~~t~~e~~~a~~~Gad~vk~~~~~~~g~~~~~~l~~ 146 (205)
T 1wa3_A 72 SV----EQCRKAVESGAEFI-VSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKG 146 (205)
T ss_dssp SH----HHHHHHHHHTCSEE-ECSSCCHHHHHHHHHHTCEEECEECSHHHHHHHHHTTCCEEEETTHHHHHHHHHHHHHT
T ss_pred CH----HHHHHHHHcCCCEE-EcCCCCHHHHHHHHHcCCcEECCcCCHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHH
Confidence 22 22455555677776 443221 0 0 0000123567788888
Q ss_pred hc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 200 AL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 200 ~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
.+ ++||++.|||+ .+++.+++ ..|+|+|.+||+++.
T Consensus 147 ~~~~~pvia~GGI~-~~~~~~~~-~~Ga~~v~vGs~i~~ 183 (205)
T 1wa3_A 147 PFPNVKFVPTGGVN-LDNVCEWF-KAGVLAVGVGSALVK 183 (205)
T ss_dssp TCTTCEEEEBSSCC-TTTHHHHH-HHTCSCEEECHHHHC
T ss_pred hCCCCcEEEcCCCC-HHHHHHHH-HCCCCEEEECccccC
Confidence 77 89999999996 78999999 699999999999876
No 108
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=98.95 E-value=3.6e-08 Score=90.20 Aligned_cols=51 Identities=20% Similarity=0.165 Sum_probs=45.2
Q ss_pred cCCHHHHHHHHHhcCCcEE--EeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 188 PAKWGEIADIVAALSIPVI--ANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 188 ~~~~~~i~~i~~~~~iPVi--~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
..+++.++++++.+++||+ +.|||.|++|+.+++ ..|||+|++|++++..+
T Consensus 193 ~~~~~ll~~i~~~~~iPVivvA~GGI~t~~dv~~~~-~~GAdgVlVGsai~~a~ 245 (297)
T 4adt_A 193 RAPIDLILLTRKLKRLPVVNFAAGGIATPADAAMCM-QLGMDGVFVGSGIFESE 245 (297)
T ss_dssp TCCHHHHHHHHHHTSCSSEEEEESCCCSHHHHHHHH-HTTCSCEEESHHHHTSS
T ss_pred CCCHHHHHHHHHhcCCCeEEEecCCCCCHHHHHHHH-HcCCCEEEEhHHHHcCC
Confidence 4568889999998899987 999999999999999 58999999999988643
No 109
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=98.95 E-value=1.4e-08 Score=93.23 Aligned_cols=151 Identities=17% Similarity=0.236 Sum_probs=97.3
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
+.|+++.+.. .+.++.+.+ |+++|+++.++|... +...|..+.+.++. ++++++.+++|+.++.+.+
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~--~~~~G~~~~~~~~~----i~~i~~~~~~Pvi~~~~~~ 88 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADI--RAQGGVARMSDPKI----IKEIMAAVSIPVMAKVRIG 88 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHH--HHTTCCCCCCCHHH----HHHHHTTCSSCEEEEEETT
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHH--HhhcCCccCCCHHH----HHHHHHhcCCCeEEEeccC
Confidence 3478877654 344544545 999999987655432 12235556677765 4556677788988876543
Q ss_pred C------------------------C------h----------HHHHHHHHHHHHcCCcEEEEeecc-------------
Q 020428 154 K------------------------S------S----------QDTVELARRIEKTGVSALAVHGRK------------- 180 (326)
Q Consensus 154 ~------------------------~------~----------~~~~e~a~~l~~~G~d~i~vh~r~------------- 180 (326)
+ + . ..+.+.+..+.++|+|+|.+||-.
T Consensus 89 ~~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~~~~~i~l~~~v~~~~~~~~a~~~Gad~I~v~G~~~~g~~~e~~~~~~ 168 (297)
T 2zbt_A 89 HFVEAMILEAIGVDFIDESEVLTPADEEHHIDKWKFKVPFVCGARNLGEALRRIAEGAAMIRTKGEAGTGNVVEAVRHAR 168 (297)
T ss_dssp CHHHHHHHHHTTCSEEEEETTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCSSSCCTHHHHHHHH
T ss_pred CHHHHHHHHHCCCCEEeeeCCCChHHHHHHHHHhCCCceEEeecCCHHHHHHHHHcCCCEEEEcccccCcchHHHHhhHH
Confidence 2 0 0 011222333455566666555310
Q ss_pred -------------cCCC----CCCcCCHHHHHHHHHhcCCcEE--EeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 181 -------------VADR----PRDPAKWGEIADIVAALSIPVI--ANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 181 -------------~~~~----~~~~~~~~~i~~i~~~~~iPVi--~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
.... ...+.+++.++++++.+++||+ +.|||.|++++.+++ ..|||+|++||+++..
T Consensus 169 ~~~~~i~~~~g~t~~~~~~~~~~~~~~~~~i~~l~~~~~~pvi~~a~GGI~~~e~i~~~~-~aGadgvvvGsai~~~ 244 (297)
T 2zbt_A 169 TMWKEIRYVQSLREDELMAYAKEIGAPFELVKWVHDHGRLPVVNFAAGGIATPADAALMM-HLGMDGVFVGSGIFKS 244 (297)
T ss_dssp HHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHSSCSSCEEBCSSCCSHHHHHHHH-HTTCSEEEECGGGGGS
T ss_pred HHHHHHHHcCCcCCCCchhhhhcchhhHHHHHHHHHhcCCCcEEEeeCCCCCHHHHHHHH-HcCCCEEEEchHHhCC
Confidence 0000 0023467889999988899998 999999999999999 5899999999998853
No 110
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=98.95 E-value=6.7e-09 Score=99.10 Aligned_cols=141 Identities=11% Similarity=0.128 Sum_probs=114.7
Q ss_pred CCCHHHHHHHHHHhhc-CCCEEEEccCCCccc--cccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHH
Q 020428 84 TSDAVRALTAAKMVCK-DVAAIDINMGCPKSF--SVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQD 158 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~--~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~ 158 (326)
+.+++++.++|+.+.+ ||+.|.|+.||+..- .....||+...++++...++++++|+++ ++++.+...-+|+.++
T Consensus 135 ~~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~~~~~~~ 214 (392)
T 2poz_A 135 ADTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRSMSAEAIELAYRRVKAVRDAAGPEIELMVDLSGGLTTDE 214 (392)
T ss_dssp CCSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCCcchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHH
Confidence 3589999888887665 999999999875320 0012345555677888999999999987 6889998888899999
Q ss_pred HHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 159 TVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++++.+++.|+++|- +. ..+.+++..+++++.+++||++.+.+.|+++++++++...+|.|++-
T Consensus 215 a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 280 (392)
T 2poz_A 215 TIRFCRKIGELDICFVE-------EP-CDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQACGIIQPD 280 (392)
T ss_dssp HHHHHHHHGGGCEEEEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCCSEECCC
T ss_pred HHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999998873 22 24568999999999999999999999999999999976668999874
No 111
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=98.93 E-value=9.3e-10 Score=98.51 Aligned_cols=86 Identities=17% Similarity=0.319 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.++.++++.++++|+|+|+++..+.... ..+.+++.++++++.+++||+++|||.+++++.+++ ..|||+|++|++++
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~-~~Gad~V~lg~~~l 107 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVE-KRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELI-LRGADKVSINTAAV 107 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSS-HHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HTTCSEEEESHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhc-CCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH-HcCCCEEEEChHHH
Confidence 4678999999999999999998765422 234568889999999999999999999999999999 58999999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.+|+++.+
T Consensus 108 ~~p~~~~~ 115 (253)
T 1thf_D 108 ENPSLITQ 115 (253)
T ss_dssp HCTHHHHH
T ss_pred hChHHHHH
Confidence 99987654
No 112
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=98.92 E-value=1.1e-09 Score=125.41 Aligned_cols=194 Identities=13% Similarity=0.116 Sum_probs=128.9
Q ss_pred CCceEEccccC-CCCHHHHHHHHHcCC-CeE-EeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 4 QNKLVLAPMVR-VGTLPFRLLAAQYGA-DIT-YGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 4 ~~~iilAPM~g-~t~~~fr~~~~~~G~-~l~-~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
+.|||+|||++ .++..+...+.+.|. |.+ ...+.+++.+...-+. ++..-..+.|+.|
T Consensus 427 ~~PIi~a~M~~~~s~~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~-------------------~r~~~~~~~p~~v 487 (3089)
T 3zen_D 427 RSPILLAGMTPTTVDAKIVAAAANAGHWAELAGGGQVTEQIFNDRIAE-------------------LETLLEPGRAIQF 487 (3089)
T ss_dssp SCSEEECCCHHHHTSHHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHH-------------------HHHHSCTTCCCEE
T ss_pred CCCEEeCCCcCCcCCHHHHHHHHhCCCceeecCCCCCCHHHHHHHHHH-------------------HHHhcCCCCceee
Confidence 67999999995 569999999999986 666 2334344443221110 0000112458999
Q ss_pred EECCCCHHHH------HHHHHHhhc-C--CCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE-Ee
Q 020428 81 QMGTSDAVRA------LTAAKMVCK-D--VAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC-KI 150 (326)
Q Consensus 81 Ql~g~~~~~~------~~aa~~~~~-~--~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v-K~ 150 (326)
++.-.+|..+ .+..+.+.+ | +|+|-+.+|.|. ++...++++.+++. ++.+.. +.
T Consensus 488 Nl~~~~p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P~---------------~ee~~~~i~~l~~~-Gi~~i~~~~ 551 (3089)
T 3zen_D 488 NTLFLDPYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIPD---------------LEEAVDIIDELNEV-GISHVVFKP 551 (3089)
T ss_dssp EEECSCHHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCCC---------------HHHHHHHHTSTTHH-HHCSEEECC
T ss_pred chhhcChhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCCc---------------hhHhHHHHHHHHHc-CCEEEEEeC
Confidence 9987777531 233444444 7 788999888873 24555666666654 444433 55
Q ss_pred cCCCChHHHHHHHHHHHHcCCc------EEEEeecccCCCCCCcCCHHHH----HHHHHhcCCcEEEeCCCCCHHHHHHH
Q 020428 151 RLLKSSQDTVELARRIEKTGVS------ALAVHGRKVADRPRDPAKWGEI----ADIVAALSIPVIANGDVFEYDDFQRI 220 (326)
Q Consensus 151 r~g~~~~~~~e~a~~l~~~G~d------~i~vh~r~~~~~~~~~~~~~~i----~~i~~~~~iPVi~nGgI~s~~d~~~~ 220 (326)
. +.+.++.+.+.|+| .|++.|-+..++........++ .++++.+++|||+.|||.|++++..+
T Consensus 552 ~-------t~~~a~~~~~i~~d~~~~~y~vv~~G~eaGGH~g~~~~~~ll~~~~~~ir~~~~iPViaaGGI~d~~~vaaa 624 (3089)
T 3zen_D 552 G-------TVEQIRSVIRIAAEVPTKPVIVHIEGGRAGGHHSWEDLDDLLLATYSELRSRSNITICVGGGIGTPERSAEY 624 (3089)
T ss_dssp C-------SHHHHHHHHHHHTTSTTSCEEEEECCSSSSEECCSCCHHHHHHHHHHHHTTCTTEEEEEESSCCCTTTTHHH
T ss_pred C-------CHHHHHHHHHhhhhcCCCcEEEEEeCCCcCCCCCcccHHHHHHHHHHHHhhcCCCeEEEEeCCCCHHHHHHH
Confidence 2 24456666777777 8999988876654332223455 67777789999999999999999998
Q ss_pred HH----------hcCCcEEEeccchhcCc
Q 020428 221 KT----------AAGASSVMAARGALWNA 239 (326)
Q Consensus 221 l~----------~~Gad~VmiGr~~l~~P 239 (326)
+. ..|||||++|+.++..+
T Consensus 625 l~g~ws~~~~~p~lGAdGV~vGTrfl~t~ 653 (3089)
T 3zen_D 625 LSGRWAEVHGYPLMPIDGILVGTAAMATL 653 (3089)
T ss_dssp HHTGGGGTTTCCCCCCSEEECSSTTTTCT
T ss_pred hccccccccCccCCCCCEEEecHHHHhCc
Confidence 81 37999999999999644
No 113
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=98.92 E-value=1.3e-08 Score=97.38 Aligned_cols=137 Identities=9% Similarity=0.106 Sum_probs=110.8
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEcc------CCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCCh
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINM------GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSS 156 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~------gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~ 156 (326)
+++++.+.|+.+.+ ||+.|.|+. |++... ...|....++++...++++++|+++ ++++.+...-+|+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s---~~~g~~~~~~~~~~~e~v~avr~avG~d~~l~vDan~~~~~ 222 (403)
T 2ox4_A 146 RKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGV---FLEGPLPSETIKIGVERVEAIRNAVGPDVDIIVENHGHTDL 222 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTC---CCSSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccccCCccccccC---cccCCCchHHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 89999888887765 999999996 664221 1222222346678889999999987 68899998888999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
++++++++.++++|+++|- +. ..+.+|+..+++++.+++||++.+.+.|+++++++++...+|.|++--
T Consensus 223 ~~ai~~~~~l~~~~i~~iE-------~P-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 291 (403)
T 2ox4_A 223 VSAIQFAKAIEEFNIFFYE-------EI-NTPLNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRSIDVIQPDL 291 (403)
T ss_dssp HHHHHHHHHHGGGCEEEEE-------CC-SCTTSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHHHHHHHhhCCCEEe-------CC-CChhhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCc
Confidence 9999999999999998873 22 245689999999999999999999999999999999766689998853
No 114
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=98.92 E-value=2.2e-08 Score=95.67 Aligned_cols=136 Identities=15% Similarity=0.187 Sum_probs=112.4
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+...++..+++.+.+.|+.+.+ ||+.|.++.|+ +++...++++++|+++ ++++.+...-+
T Consensus 136 p~~~~~g~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~~~e~v~avR~a~g~d~~l~vDan~~ 199 (397)
T 2qde_A 136 PLGLVLGAGEPEAVAEEALAVLREGFHFVKLKAGG----------------PLKADIAMVAEVRRAVGDDVDLFIDINGA 199 (397)
T ss_dssp EBCEECCCSCHHHHHHHHHHHHHHTCSCEEEECCS----------------CHHHHHHHHHHHHHHHCTTSCEEEECTTC
T ss_pred ceEEECCCCCHHHHHHHHHHHHHhhhhheeecccC----------------CHHHHHHHHHHHHHhhCCCCEEEEECCCC
Confidence 44434443689999888887765 99999998773 5677888999999987 68899998888
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
|+.++++++++.+++.|+++|- +. ..+.+++..+++++.+++||++.+.+.|+++++++++...+|.|++--
T Consensus 200 ~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 271 (397)
T 2qde_A 200 WTYDQALTTIRALEKYNLSKIE-------QP-LPAWDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKT 271 (397)
T ss_dssp CCHHHHHHHHHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECH
T ss_pred CCHHHHHHHHHHHHhCCCCEEE-------CC-CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEec
Confidence 9999999999999999999873 22 245689999999999999999999999999999999777799999854
Q ss_pred chh
Q 020428 234 GAL 236 (326)
Q Consensus 234 ~~l 236 (326)
.-.
T Consensus 272 ~~~ 274 (397)
T 2qde_A 272 QKA 274 (397)
T ss_dssp HHH
T ss_pred ccc
Confidence 433
No 115
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=98.91 E-value=1.7e-08 Score=96.29 Aligned_cols=125 Identities=12% Similarity=0.152 Sum_probs=107.5
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~ 162 (326)
+++++.++|+.+.+ ||+.|.|++|- .+++...++++++|+++ ++++.+...-+|+.++++++
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~ 226 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQ---------------PDGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRM 226 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCC---------------SCHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHH
Confidence 89999988887765 99999998762 24788889999999987 68999998888999999999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.++++++++++...+|.|++--
T Consensus 227 ~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~ 289 (393)
T 2og9_A 227 CRIFEPFNLVWIE-------EP-LDAYDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDA 289 (393)
T ss_dssp HHHHGGGCCSCEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHhhCCCEEE-------CC-CCcccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCc
Confidence 9999999999873 22 245689999999999999999999999999999999766689998853
No 116
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=98.91 E-value=3.2e-08 Score=95.59 Aligned_cols=142 Identities=15% Similarity=0.196 Sum_probs=115.7
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccc-cccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGA-ALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~-~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
.+++++.+.++...+ ||..|.++.|||.... .|. ....+++...++++++|+++ ++++.+...-+|+.++++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~----~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~ 220 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLR----GGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAI 220 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTT----CCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccc----cCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHH
Confidence 688988888877654 9999999999996532 222 12335677888999999987 678888888889999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
++++.++++|+++|. + +..+.+++.++++++.+++||++.+.+.|+.++.++++...+|.|++--+-.+.
T Consensus 221 ~~~~~Le~~~i~~iE-------e-P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GG 290 (433)
T 3rcy_A 221 RLGQAIEPYSPLWYE-------E-PVPPDNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGG 290 (433)
T ss_dssp HHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTH
T ss_pred HHHHHhhhcCCCEEE-------C-CCChhhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCC
Confidence 999999999999984 2 234558999999999999999999999999999999976668999887554433
No 117
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=98.89 E-value=3.1e-08 Score=95.05 Aligned_cols=143 Identities=9% Similarity=0.026 Sum_probs=116.4
Q ss_pred cEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+-... ...+++.+.+.++.+.+ ||+.|.|++|++-. + |+ ++++...+.++++|+++ ++++.+....
T Consensus 169 ~~y~s~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~gp~----d--g~---~~~~~die~v~avReavG~d~~L~vDaN~ 239 (412)
T 3stp_A 169 PVYYSKLYAGSIEAMQKEAEEAMKGGYKAFKSRFGYGPK----D--GM---PGMRENLKRVEAVREVIGYDNDLMLECYM 239 (412)
T ss_dssp EEEEECCCSCCHHHHHHHHHHHHTTTCSEEEEECCCCGG----G--HH---HHHHHHHHHHHHHHHHHCSSSEEEEECTT
T ss_pred EEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEecccCcc----c--cc---chHHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 454443 45689999998888766 99999999988521 1 22 35678888999999987 6889999988
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.|++++.++++...+|.|++-
T Consensus 240 ~~~~~~Ai~~~~~Le~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik 311 (412)
T 3stp_A 240 GWNLDYAKRMLPKLAPYEPRWLE-------EP-VIADDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYD 311 (412)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999999999999984 22 24558999999999999999999999999999999976668999876
Q ss_pred cchh
Q 020428 233 RGAL 236 (326)
Q Consensus 233 r~~l 236 (326)
-+-.
T Consensus 312 ~~~~ 315 (412)
T 3stp_A 312 TNRV 315 (412)
T ss_dssp HHHH
T ss_pred hhhc
Confidence 4433
No 118
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=98.89 E-value=5.4e-08 Score=92.73 Aligned_cols=123 Identities=11% Similarity=0.040 Sum_probs=105.5
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~ 162 (326)
+++++.+.|+.+.+ ||+.|.|++|+ .+++...++++++|+++ ++++.+...-+|+.++++++
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~~~e~v~avR~a~G~~~~l~vDan~~~~~~~a~~~ 209 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGH---------------RDFDRDLRRLELLKTCVPAGSKVMIDPNEAWTSKEALTK 209 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCC---------------SSHHHHHHHHHHHHTTSCTTCEEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCC---------------CCHHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHH
Confidence 78989888887665 99999999886 24567889999999988 68899988888999999999
Q ss_pred HHHHHH--cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 163 ARRIEK--TGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 163 a~~l~~--~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++.+++ .|+++|- +. ..+.+++..+++++.+ ++||++.+.+ ++++++++++...+|.|++.
T Consensus 210 ~~~l~~~g~~i~~iE-------qP-~~~~~~~~~~~l~~~~~~iPIa~dE~~-~~~~~~~~i~~~~~d~v~ik 273 (389)
T 2oz8_A 210 LVAIREAGHDLLWVE-------DP-ILRHDHDGLRTLRHAVTWTQINSGEYL-DLQGKRLLLEAHAADILNVH 273 (389)
T ss_dssp HHHHHHTTCCCSEEE-------SC-BCTTCHHHHHHHHHHCCSSEEEECTTC-CHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHhcCCCceEEe-------CC-CCCcCHHHHHHHHhhCCCCCEEeCCCC-CHHHHHHHHHcCCCCEEEEC
Confidence 999999 7787762 22 2355899999999999 9999999999 99999999976679999997
No 119
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=98.88 E-value=1.5e-09 Score=97.13 Aligned_cols=86 Identities=20% Similarity=0.310 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.++.++++.++++|+|.|++++.+.... ..+.+++.++++++.+++||+++|||.+.+++++++ ..|||+|++|++++
T Consensus 31 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~-~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~-~~Gad~V~lg~~~l 108 (252)
T 1ka9_F 31 GDPVEAARAYDEAGADELVFLDISATHE-ERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLL-LSGADKVSVNSAAV 108 (252)
T ss_dssp TCHHHHHHHHHHHTCSCEEEEECCSSTT-CHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHH-HHTCSEEEECHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEcCCcccc-CccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHH-HcCCCEEEEChHHH
Confidence 4788999999999999999997765432 234467889999999999999999999999999999 58999999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.+|+++.+
T Consensus 109 ~~p~~~~~ 116 (252)
T 1ka9_F 109 RRPELIRE 116 (252)
T ss_dssp HCTHHHHH
T ss_pred hCcHHHHH
Confidence 99987654
No 120
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=98.88 E-value=6.2e-08 Score=87.68 Aligned_cols=155 Identities=13% Similarity=0.155 Sum_probs=105.2
Q ss_pred cEEEEECCCCH--HHHHHHHHHhhc-CCCEEEEccC--CCcc---ccc-----cccccccccCChHHHHHHHHHHhhc-c
Q 020428 77 HVVFQMGTSDA--VRALTAAKMVCK-DVAAIDINMG--CPKS---FSV-----SGGMGAALLSKPELIHDILTMLKRN-L 142 (326)
Q Consensus 77 p~~vQl~g~~~--~~~~~aa~~~~~-~~d~idlN~g--cP~~---~~~-----~~~~G~~l~~~p~~~~~iv~~v~~~-~ 142 (326)
.++.-|...+| +...+.++.+.+ |+|.|+|+.- -|.- .+. .-..| -+.+...++++++++. +
T Consensus 18 ~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G----~~~~~~~~~v~~ir~~~~ 93 (268)
T 1qop_A 18 AFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAG----VTPAQCFEMLAIIREKHP 93 (268)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCS
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcCC
Confidence 46666655565 888888888877 8999999652 1210 000 00111 1455677899999988 7
Q ss_pred cCcEEEEecCCCChH---HHHHHHHHHHHcCCcEEEEeecccC-------------------------------------
Q 020428 143 DVPVTCKIRLLKSSQ---DTVELARRIEKTGVSALAVHGRKVA------------------------------------- 182 (326)
Q Consensus 143 ~~pv~vK~r~g~~~~---~~~e~a~~l~~~G~d~i~vh~r~~~------------------------------------- 182 (326)
++|+.+=. .+++- ...++++.+.++|+|++++|.-..+
T Consensus 94 ~~Pv~lm~--y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~~~~g~~~i~l~~p~t~~~~i~~i~~~~~ 171 (268)
T 1qop_A 94 TIPIGLLM--YANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGR 171 (268)
T ss_dssp SSCEEEEE--CHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHCC
T ss_pred CCCEEEEE--cccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhhCC
Confidence 89976611 11111 1357788888888888887533210
Q ss_pred --------CCCCC------cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 183 --------DRPRD------PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 183 --------~~~~~------~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
..++| +...+.++++++.+++||++.|||.|++++.+++ ..|||+|++|+++...
T Consensus 172 g~v~~~s~~G~tG~~~~~~~~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~-~agAD~vVVGSai~~~ 240 (268)
T 1qop_A 172 GYTYLLSRSGVTGAENRGALPLHHLIEKLKEYHAAPALQGFGISSPEQVSAAV-RAGAAGAISGSAIVKI 240 (268)
T ss_dssp SCEEEESSSSCCCSSSCC--CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred CcEEEEecCCcCCCccCCCchHHHHHHHHHhccCCcEEEECCCCCHHHHHHHH-HcCCCEEEEChHHhhh
Confidence 00111 2236889999998899999999999999999988 5899999999997753
No 121
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=98.87 E-value=1.6e-08 Score=91.08 Aligned_cols=154 Identities=14% Similarity=0.199 Sum_probs=100.0
Q ss_pred cEEEEECCCCH--HHHHHHHHHhhc-CCCEEEEccCCCcccccc----------ccccccccCChHHHHHHHHHHhhccc
Q 020428 77 HVVFQMGTSDA--VRALTAAKMVCK-DVAAIDINMGCPKSFSVS----------GGMGAALLSKPELIHDILTMLKRNLD 143 (326)
Q Consensus 77 p~~vQl~g~~~--~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~----------~~~G~~l~~~p~~~~~iv~~v~~~~~ 143 (326)
.++.-|...+| +.+.+.++.+.+ |+|.|+++..++.|.... -..| -+++...++++++++.++
T Consensus 19 ~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g----~~~~~~~~~i~~ir~~~~ 94 (262)
T 1rd5_A 19 AFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASG----TTMDAVLEMLREVTPELS 94 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTT----CCHHHHHHHHHHHGGGCS
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcCC
Confidence 46666655554 788888888876 899999987664332110 0111 267888899999999889
Q ss_pred CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeec--------------------------cc----------------
Q 020428 144 VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGR--------------------------KV---------------- 181 (326)
Q Consensus 144 ~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r--------------------------~~---------------- 181 (326)
+|+.+-.+. ++.. ....+.+.++|+|+++++.- +.
T Consensus 95 ~Pv~~m~~~--~~~~-~~~~~~a~~aGadgv~v~d~~~~~~~~~~~~~~~~g~~~i~~~a~~t~~e~~~~~~~~~~g~v~ 171 (262)
T 1rd5_A 95 CPVVLLSYY--KPIM-FRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVY 171 (262)
T ss_dssp SCEEEECCS--HHHH-SCCTHHHHHTTCCEEECTTCBTTTHHHHHHHHHHTTCEECEEECTTSCHHHHHHHHHHCCSCEE
T ss_pred CCEEEEecC--cHHH-HHHHHHHHHcCCCEEEEcCCChhhHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHhcCCCeEE
Confidence 998874321 1100 00011144455555544321 00
Q ss_pred ---CCCCCC------cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 182 ---ADRPRD------PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 182 ---~~~~~~------~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
...++| +...+.++++++.+++||++.|||.|++++.+++ ..|||+|++|+++...
T Consensus 172 ~~s~~G~tG~~~~~~~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~-~~GAdgvvVGSai~~~ 236 (262)
T 1rd5_A 172 LVSVNGVTGPRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIA-QWGADGVIIGSAMVRQ 236 (262)
T ss_dssp EECSSCCBCTTSCBCTHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEECHHHHHH
T ss_pred EecCCCCCCCCcCCCchHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHH-HcCCCEEEEChHHHhH
Confidence 000011 1134678899988899999999999999999999 5999999999997754
No 122
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=98.86 E-value=4.2e-08 Score=94.13 Aligned_cols=134 Identities=16% Similarity=0.253 Sum_probs=110.5
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEcc----CCCcccccccccccccc--CChHHHHHHHHHHhhcc--cCcEEEEecCCCCh
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINM----GCPKSFSVSGGMGAALL--SKPELIHDILTMLKRNL--DVPVTCKIRLLKSS 156 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~----gcP~~~~~~~~~G~~l~--~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~ 156 (326)
+++++.+.|+.+.+ ||+.|.++. |+.... +|+.+. ++++...++++++|+++ ++++.+...-+|+.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~-----~~G~~~~~~~~~~~~e~v~avRea~G~d~~l~vDan~~~~~ 223 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRD-----FWNGAISPREHEAMVARVAAVREAVGPEVEVAIDMHGRFDI 223 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSC-----SSSCCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCCCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCC-----cCccccchhhHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 68888888877665 999999998 653221 455554 46788899999999987 57888888878999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++++++.++++|+++|. +. ..+.+++..+++++.+++||++.+.+.++++++++++...+|.|++-
T Consensus 224 ~~a~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 291 (410)
T 2qq6_A 224 PSSIRFARAMEPFGLLWLE-------EP-TPPENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDYVMPD 291 (410)
T ss_dssp HHHHHHHHHHGGGCCSEEE-------CC-SCTTCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCB
T ss_pred HHHHHHHHHHhhcCCCeEE-------CC-CChhhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999874 11 23568999999999999999999999999999999976668999874
No 123
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=98.86 E-value=3.7e-08 Score=88.95 Aligned_cols=155 Identities=13% Similarity=0.148 Sum_probs=106.9
Q ss_pred CcEEEEECCCCH--HHHHHHHHHhhc-CCCEEEEcc--CCCccc---ccc-----ccccccccCChHHHHHHHHHHhhc-
Q 020428 76 NHVVFQMGTSDA--VRALTAAKMVCK-DVAAIDINM--GCPKSF---SVS-----GGMGAALLSKPELIHDILTMLKRN- 141 (326)
Q Consensus 76 ~p~~vQl~g~~~--~~~~~aa~~~~~-~~d~idlN~--gcP~~~---~~~-----~~~G~~l~~~p~~~~~iv~~v~~~- 141 (326)
..++.-|...+| +...+.++.+.+ |+|.|||++ +-|.-. +.+ -..| -+.+.+.++++++|+.
T Consensus 18 ~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G----~~~~~~~~~v~~ir~~~ 93 (267)
T 3vnd_A 18 GAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAG----TTSSDCFDIITKVRAQH 93 (267)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHC
T ss_pred CeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcC
Confidence 356767755555 889999998876 899999874 233310 111 0122 2456778899999987
Q ss_pred ccCcEEEEecCCCChH---HHHHHHHHHHHcCCcEEEEeecccC------------------------------------
Q 020428 142 LDVPVTCKIRLLKSSQ---DTVELARRIEKTGVSALAVHGRKVA------------------------------------ 182 (326)
Q Consensus 142 ~~~pv~vK~r~g~~~~---~~~e~a~~l~~~G~d~i~vh~r~~~------------------------------------ 182 (326)
+++|+.+-. .+++- ....+++.+.++|+|.++++.-..+
T Consensus 94 ~~~Pivlm~--Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~ 171 (267)
T 3vnd_A 94 PDMPIGLLL--YANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQG 171 (267)
T ss_dssp TTCCEEEEE--CHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHC
T ss_pred CCCCEEEEe--cCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhC
Confidence 789987643 12321 2467888888899999887532110
Q ss_pred ---------CCCCC------cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 183 ---------DRPRD------PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 183 ---------~~~~~------~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
...+| +...+.++++++.+++||+..|||.|++++.+.+ ..|||+|.+|++++.
T Consensus 172 ~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~-~~gADgvVVGSaiv~ 240 (267)
T 3vnd_A 172 EGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAI-KAGAAGAISGSAVVK 240 (267)
T ss_dssp CSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEECHHHHH
T ss_pred CCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 00011 1235778899988899999999999999999788 589999999999764
No 124
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=98.86 E-value=3.7e-08 Score=94.18 Aligned_cols=124 Identities=13% Similarity=0.207 Sum_probs=106.8
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~ 162 (326)
+++++.+.++.+.+ ||+.|.++.|. .+++...++++++|+++ ++++.+...-+|+.++++++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~ 239 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKVGQ---------------PNCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRM 239 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCC---------------SCHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCC---------------CCHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHH
Confidence 79999888887765 99999998763 25778889999999987 68899999888999999999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++.++++|+++|- +. ..+.+++..+++++.+++||++.+.+.++++++++++...+|.|++-
T Consensus 240 ~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 301 (398)
T 2pp0_A 240 GRKMEQFNLIWIE-------EP-LDAYDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPD 301 (398)
T ss_dssp HHHHGGGTCSCEE-------CC-SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHcCCceee-------CC-CChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999873 22 24568999999999999999999999999999999976668999885
No 125
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=98.85 E-value=4.1e-08 Score=94.04 Aligned_cols=136 Identities=14% Similarity=0.201 Sum_probs=109.3
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEcc------CCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCCh
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINM------GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSS 156 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~------gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~ 156 (326)
+++++.+.|+.+.+ ||+.|.++. |++.. +...|....++++...++++++|+++ ++++.+...-+|+.
T Consensus 152 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~---s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~~~~~ 228 (407)
T 2o56_A 152 EPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQ---QNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHAFTDT 228 (407)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSC---SCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTTCSCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcccccCCcCcccc---CcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCCCCCH
Confidence 89999888887765 999999986 54311 11122222345678889999999987 68899988888999
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++++++.++++|+++|. +. ..+.+++..+++++.+++||++.+.+.++++++++++...+|.|++-
T Consensus 229 ~~a~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 296 (407)
T 2o56_A 229 TSAIQFGRMIEELGIFYYE-------EP-VMPLNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSLSVIQPD 296 (407)
T ss_dssp HHHHHHHHHHGGGCCSCEE-------CS-SCSSSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHHHHhcCCCEEe-------CC-CChhhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEecC
Confidence 9999999999999999873 22 24568999999999999999999999999999999976668998875
No 126
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=98.84 E-value=5.4e-08 Score=92.79 Aligned_cols=125 Identities=8% Similarity=0.052 Sum_probs=106.9
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~ 162 (326)
+++++.+.++.+.+ ||+.|.|+.|++ +++...++++++++++ ++++.+...-+|+.++++++
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~---------------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~ 229 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGA---------------PIEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAY 229 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSS---------------CHHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHH
Confidence 78889888887665 999999998862 3677788999999887 58899988888999999999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc----CCcEEEecc
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA----GASSVMAAR 233 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~----Gad~VmiGr 233 (326)
++.++++|+++|. +. ..+.+++..+++++.+++||++.+.+.++++++++++.. .+|.|++--
T Consensus 230 ~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~ 296 (392)
T 1tzz_A 230 AKMLRDYPLFWYE-------EV-GDPLDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDC 296 (392)
T ss_dssp HHHHTTSCCSEEE-------CC-SCTTCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCT
T ss_pred HHHHHHcCCCeec-------CC-CChhhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECc
Confidence 9999999999874 22 235689999999999999999999999999999999766 689998853
No 127
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=98.84 E-value=4.9e-08 Score=92.76 Aligned_cols=125 Identities=10% Similarity=0.105 Sum_probs=106.8
Q ss_pred CCH---HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHH
Q 020428 85 SDA---VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQD 158 (326)
Q Consensus 85 ~~~---~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~ 158 (326)
.++ +.+.+.|+.+.+ ||+.|.++.|+ .+++...++++++|+++ ++++.+...-+|+.++
T Consensus 135 ~~~~~~e~~~~~a~~~~~~Gf~~vKik~g~---------------~~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~ 199 (382)
T 2gdq_A 135 DSPQWISRSVSNVEAQLKKGFEQIKVKIGG---------------TSFKEDVRHINALQHTAGSSITMILDANQSYDAAA 199 (382)
T ss_dssp SSTTHHHHHHHHHHHHHTTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHH
T ss_pred CCcccHHHHHHHHHHHHHcCCCEEEEcCCC---------------CCHHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHH
Confidence 578 888888887765 99999999876 24678889999999987 6889999888899999
Q ss_pred HHHHHHHHHHc-CCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 159 TVELARRIEKT-GVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 159 ~~e~a~~l~~~-G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++++.+++. |+++|- +. ..+.+++..+++++.+++||++.+.+.|+++++++++...+|.|++-
T Consensus 200 a~~~~~~l~~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 266 (382)
T 2gdq_A 200 AFKWERYFSEWTNIGWLE-------EP-LPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPD 266 (382)
T ss_dssp HHTTHHHHTTCSCEEEEE-------CC-SCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHHHHhhccCCeEEE-------CC-CCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC
Confidence 99999999999 988873 22 24568999999999999999999999999999999976668999874
No 128
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=98.83 E-value=6.4e-08 Score=92.66 Aligned_cols=146 Identities=13% Similarity=0.115 Sum_probs=117.5
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
.|+-..+++.+++++.+.++.+.+ ||..|.+ .|+|.... .....+++...+.++++|+++ ++++.+....
T Consensus 115 v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl-~G~~~~~~------~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~ 187 (405)
T 3rr1_A 115 MRTYSWVGGDRPADVIAGMKALQAGGFDHFKL-NGCEEMGI------IDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG 187 (405)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHHHTTCCEEEE-ESCCSSSC------BCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS
T ss_pred eeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEE-ecCCcccc------cccchhHHHHHHHHHHHHHHhCCCceEEEECCC
Confidence 466666777889999888877655 9999999 88874311 111234567788999999988 6789999888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.|++++.++++...+|.|++-
T Consensus 188 ~~~~~~A~~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d 259 (405)
T 3rr1_A 188 RVSAPMAKVLIKELEPYRPLFIE-------EP-VLAEQAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPD 259 (405)
T ss_dssp CBCHHHHHHHHHHHGGGCCSCEE-------CS-SCCSSTHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCB
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------CC-CCcccHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEEC
Confidence 99999999999999999999884 22 24558999999999999999999999999999999977779999886
Q ss_pred cchh
Q 020428 233 RGAL 236 (326)
Q Consensus 233 r~~l 236 (326)
-+-.
T Consensus 260 ~~~~ 263 (405)
T 3rr1_A 260 LSHA 263 (405)
T ss_dssp TTTT
T ss_pred hhhc
Confidence 4433
No 129
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=98.81 E-value=4.1e-08 Score=93.06 Aligned_cols=127 Identities=12% Similarity=0.144 Sum_probs=108.2
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCC-hHHHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKS-SQDTVE 161 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~-~~~~~e 161 (326)
+++++.+.++.+.+ ||+.|.|++||+- .+++...+.++++|+++ ++++.+....+|+ .+++++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g-------------~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~ 212 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMG-------------DDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAM 212 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTT-------------SCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCC-------------CCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHH
Confidence 34888887777655 9999999999861 24788889999999987 6889999988999 999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
+++.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.+++++.++++...+|.|++--
T Consensus 213 ~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~ 276 (374)
T 3sjn_A 213 MAKRLEEFNLNWIE-------E-PVLADSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDI 276 (374)
T ss_dssp HHHHSGGGCCSEEE-------C-SSCTTCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBT
T ss_pred HHHHhhhcCceEEE-------C-CCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCc
Confidence 99999999999984 2 2335589999999999999999999999999999999777899998753
No 130
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=98.80 E-value=5.8e-08 Score=92.87 Aligned_cols=155 Identities=7% Similarity=0.028 Sum_probs=118.6
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccc------ccccccccc--CChHHHHHHHHHHhhcc--cC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSV------SGGMGAALL--SKPELIHDILTMLKRNL--DV 144 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~------~~~~G~~l~--~~p~~~~~iv~~v~~~~--~~ 144 (326)
.|+-..+.+.+++++.+.++...+ ||..+-+..|++..... ...-|..+. ..++...++++++|+++ ++
T Consensus 123 v~~y~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~ 202 (401)
T 3sbf_A 123 IPVYTHATSDTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQF 202 (401)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred eeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCC
Confidence 355555667889998888876654 99999999998532110 001122221 12567788899999987 68
Q ss_pred cEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc
Q 020428 145 PVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA 224 (326)
Q Consensus 145 pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~ 224 (326)
++.+....+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.+++++.++++..
T Consensus 203 ~l~vDan~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~ 274 (401)
T 3sbf_A 203 HILHDVHERLFPNQAIQFAKEVEQYKPYFIE-------DI-LPPNQTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIANR 274 (401)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSCEE-------CS-SCTTCGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHHTT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhHHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHhcC
Confidence 9999999899999999999999999999884 22 235578889999999999999999999999999999766
Q ss_pred CCcEEEeccchhcC
Q 020428 225 GASSVMAARGALWN 238 (326)
Q Consensus 225 Gad~VmiGr~~l~~ 238 (326)
.+|.|++--+-.+.
T Consensus 275 ~~d~v~~k~~~~GG 288 (401)
T 3sbf_A 275 RIDFIRCHVSQIGG 288 (401)
T ss_dssp CCSEECCCGGGGTS
T ss_pred CCCEEecCccccCC
Confidence 78999887554443
No 131
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=98.80 E-value=2.2e-07 Score=88.27 Aligned_cols=139 Identities=14% Similarity=0.198 Sum_probs=114.1
Q ss_pred cEEEEECCCCHHHHHHHHHH-hhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVRALTAAKM-VCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~-~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+...++..+++++.+.++. +.+ ||..+.+..|++ +++.-.+.++++|+++ ++++.+....
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDan~ 203 (383)
T 3i4k_A 139 DVTWALGVLPLDVAVAEIEERIEEFGNRSFKLKMGAG---------------DPAEDTRRVAELAREVGDRVSLRIDINA 203 (383)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHHHCCSEEEEECCSS---------------CHHHHHHHHHHHHHTTTTTSEEEEECTT
T ss_pred EEeEEeeCCCHHHHHHHHHHHHHhcCCcEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCEEEEECCC
Confidence 44455667788877765554 556 999999998863 4667778899999998 5789999998
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.+++.++++.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.+.+++.++++...+|.|++-
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 275 (383)
T 3i4k_A 204 RWDRRTALHYLPILAEAGVELFE-------Q-PTPADDLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALK 275 (383)
T ss_dssp CSCHHHHHHHHHHHHHTTCCEEE-------S-CSCTTCHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEc
Confidence 99999999999999999999984 2 234568999999999999999999999999999999976779999987
Q ss_pred cchhcC
Q 020428 233 RGALWN 238 (326)
Q Consensus 233 r~~l~~ 238 (326)
-+-.+.
T Consensus 276 ~~~~GG 281 (383)
T 3i4k_A 276 TTKHGG 281 (383)
T ss_dssp TTTTTS
T ss_pred ccccCC
Confidence 554433
No 132
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=98.79 E-value=8.2e-08 Score=91.93 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=111.4
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCcccccccccccc-ccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAA-LLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~-l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
.+++++.+.++.+.+ ||..+.++.|+|... ..|.. ...+++...+.++++|+++ ++++.+....+|+.++++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~ 225 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTI----YDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAK 225 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcc----cccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHH
Confidence 478888887776654 999999999987541 12221 1234677788999999987 678999988899999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
++++.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.|++++.++++...+|.|++--+
T Consensus 226 ~~~~~l~~~~i~~iE-------e-P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 291 (404)
T 4e5t_A 226 RLARRLEAYDPLWFE-------E-PIPPEKPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNLG 291 (404)
T ss_dssp HHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTT
T ss_pred HHHHHHhhcCCcEEE-------C-CCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCcc
Confidence 999999999999984 2 23355899999999999999999999999999999997666899877643
No 133
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=98.79 E-value=2.7e-07 Score=87.95 Aligned_cols=141 Identities=13% Similarity=0.098 Sum_probs=115.9
Q ss_pred CcEEEEEC---CCCHHHHHHHH-HHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEE
Q 020428 76 NHVVFQMG---TSDAVRALTAA-KMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTC 148 (326)
Q Consensus 76 ~p~~vQl~---g~~~~~~~~aa-~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~v 148 (326)
.|+-..++ ..+++++.+.+ +... +||..+.+..|++.+. ...+++.-.+.++++|+++ ++++.+
T Consensus 126 v~~y~s~~g~~~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~---------~~~~~~~d~~~v~avR~a~g~~~~l~v 196 (393)
T 4dwd_A 126 LPCYSSIGGNAARSVDEVVREVARRVEAEQPAAVKIRWDGDRTR---------CDVDIPGDIAKARAVRELLGPDAVIGF 196 (393)
T ss_dssp EEEEEEECCCSSSCHHHHHHHHHHHHHHHCCSEEEEECCCCTTC---------CSCCHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred eeeEEecCccCCCCHHHHHHHHHHHHHHcCCCEEEEccCCCCcc---------cccCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 35555552 36788888777 6654 4999999999987542 3457888889999999987 689999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcE
Q 020428 149 KIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASS 228 (326)
Q Consensus 149 K~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~ 228 (326)
....+|+.++++++++.+++.|+++|- +. ..+.+++..+++++.+++||++.+.+.+.+++.++++.. +|.
T Consensus 197 DaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~ 267 (393)
T 4dwd_A 197 DANNGYSVGGAIRVGRALEDLGYSWFE-------EP-VQHYHVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRM 267 (393)
T ss_dssp ECTTCCCHHHHHHHHHHHHHTTCSEEE-------CC-SCTTCHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCE
T ss_pred ECCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCE
Confidence 999899999999999999999999984 22 245589999999999999999999999999999999766 999
Q ss_pred EEeccc
Q 020428 229 VMAARG 234 (326)
Q Consensus 229 VmiGr~ 234 (326)
|++--+
T Consensus 268 v~~k~~ 273 (393)
T 4dwd_A 268 VQPDIV 273 (393)
T ss_dssp ECCCTT
T ss_pred EEeCcc
Confidence 987644
No 134
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=98.79 E-value=5e-08 Score=91.86 Aligned_cols=135 Identities=10% Similarity=0.089 Sum_probs=112.7
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+...++..+++.+.+.++.+. .|+..+.+++|| +++.-.+.++++|+++ ++++.+....+
T Consensus 131 ~~~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~G~----------------~~~~d~~~v~avR~~~g~~~~l~vDan~~ 194 (356)
T 3ro6_B 131 PTSVTIGIKPVEETLAEAREHLALGFRVLKVKLCG----------------DEEQDFERLRRLHETLAGRAVVRVDPNQS 194 (356)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCCEEEEECCS----------------CHHHHHHHHHHHHHHHTTSSEEEEECTTC
T ss_pred eeeEEEcCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------CHHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 4556777788998888777655 499999999875 3567778899999887 67899999989
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc-CCcEEEec
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA-GASSVMAA 232 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~-Gad~VmiG 232 (326)
|+.+++.++++.+++.|+++|. |. ..+.+++..+++++.+++||++.+.+.+++++.++++.. .+|.|++-
T Consensus 195 ~~~~~a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k 266 (356)
T 3ro6_B 195 YDRDGLLRLDRLVQELGIEFIE-------QP-FPAGRTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIK 266 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCCEE-------CC-SCTTCHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCCEEE-------CC-CCCCcHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEc
Confidence 9999999999999999999984 32 235589999999998999999999999999999999656 69999987
Q ss_pred cch
Q 020428 233 RGA 235 (326)
Q Consensus 233 r~~ 235 (326)
-+-
T Consensus 267 ~~~ 269 (356)
T 3ro6_B 267 LMK 269 (356)
T ss_dssp HHH
T ss_pred ccc
Confidence 543
No 135
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=98.78 E-value=1.3e-07 Score=88.95 Aligned_cols=136 Identities=9% Similarity=0.120 Sum_probs=111.3
Q ss_pred EEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCC
Q 020428 79 VFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKS 155 (326)
Q Consensus 79 ~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~ 155 (326)
...+...+++.+.+.++... .||..+.+..|++ ++.-.+.++++|+++ ++++.+....+|+
T Consensus 132 ~~~~~~~~~~~~~~~a~~~~~~G~~~~K~K~g~~----------------~~~d~~~v~avR~a~g~~~~l~vDan~~~~ 195 (354)
T 3jva_A 132 DITLGIDEPNVMAQKAVEKVKLGFDTLKIKVGTG----------------IEADIARVKAIREAVGFDIKLRLDANQAWT 195 (354)
T ss_dssp CEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSC----------------HHHHHHHHHHHHHHHCTTSEEEEECTTCSC
T ss_pred eEEeCCCCHHHHHHHHHHHHHhCCCeEEEEeCCC----------------HHHHHHHHHHHHHHcCCCCeEEEECCCCCC
Confidence 34566678998887777654 5999999998763 355677889998887 6789999888999
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 156 SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
.++++++++.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.+++++.++++...+|.|++--+-
T Consensus 196 ~~~a~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~ 267 (354)
T 3jva_A 196 PKDAVKAIQALADYQIELVE-------Q-PVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMK 267 (354)
T ss_dssp HHHHHHHHHHTTTSCEEEEE-------C-CSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHH
T ss_pred HHHHHHHHHHHHhcCCCEEE-------C-CCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchh
Confidence 99999999999999998884 2 234558999999999999999999999999999999977779999987544
Q ss_pred hcC
Q 020428 236 LWN 238 (326)
Q Consensus 236 l~~ 238 (326)
.+.
T Consensus 268 ~GG 270 (354)
T 3jva_A 268 CGG 270 (354)
T ss_dssp HTS
T ss_pred cCC
Confidence 433
No 136
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=98.78 E-value=3e-07 Score=86.03 Aligned_cols=131 Identities=13% Similarity=0.129 Sum_probs=106.9
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLK 154 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~ 154 (326)
|+-..+.+.+++++.+.++.+.+ ||+.+.|+.|+ +++...++++++|++- ++++.+...-+|
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~----------------~~~~d~~~v~avr~~g~~~~l~vDan~~~ 193 (345)
T 2zad_A 130 ETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGE----------------NLKEDIEAVEEIAKVTRGAKYIVDANMGY 193 (345)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHSTTCEEEEECTTCS
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCcCEEEEeecC----------------CHHHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 33344566789999888877655 99999998874 4666678889998872 466777777789
Q ss_pred ChHHHHHHHHHHHHcCCc--EEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 155 SSQDTVELARRIEKTGVS--ALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d--~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+.++++++++.+++.|++ +|. +. ..+.+++..+++++.+++||++.+.+.+++++.++++...+|.|++
T Consensus 194 ~~~~a~~~~~~l~~~~i~~~~iE-------~P-~~~~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~i 264 (345)
T 2zad_A 194 TQKEAVEFARAVYQKGIDIAVYE-------QP-VRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNI 264 (345)
T ss_dssp CHHHHHHHHHHHHHTTCCCSEEE-------CC-SCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHhcCCCeeeee-------CC-CCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEE
Confidence 999999999999999999 763 22 2356899999999999999999999999999999997767999998
No 137
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=98.78 E-value=8.1e-09 Score=91.83 Aligned_cols=84 Identities=19% Similarity=0.233 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
++.++++.++++|+++|+++..+.... ..+.. +.++++++.+++||+++|||.|++++..++ ..|||+|++|++++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~~~~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l-~~Gad~V~lg~~~l~ 108 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFG-RGSNH-ELLAEVVGKLDVQVELSGGIRDDESLAAAL-ATGCARVNVGTAALE 108 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTT-SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccccc-CCChH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHH-HcCCCEEEECchHhh
Confidence 678999999999999999997655432 23344 889999999999999999999999999999 589999999999999
Q ss_pred Ccccccc
Q 020428 238 NASIFSS 244 (326)
Q Consensus 238 ~P~lf~~ 244 (326)
+|+++.+
T Consensus 109 ~p~~~~~ 115 (244)
T 2y88_A 109 NPQWCAR 115 (244)
T ss_dssp CHHHHHH
T ss_pred ChHHHHH
Confidence 9977654
No 138
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=98.78 E-value=4e-07 Score=80.93 Aligned_cols=197 Identities=13% Similarity=0.117 Sum_probs=125.5
Q ss_pred CCCCceEEccccCCCCH-HHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEE
Q 020428 2 DYQNKLVLAPMVRVGTL-PFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVF 80 (326)
Q Consensus 2 ~l~~~iilAPM~g~t~~-~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v 80 (326)
++..|+++.- ..|.+. .++..+...|+.++..- +.+.......... +++..+ +-++..
T Consensus 10 ~~~srl~~Gt-gky~~~~~~~~ai~asg~eivtva------~rR~~~~~~~~~~------------~~~~i~--~~~~lp 68 (268)
T 2htm_A 10 ELKSRLILGS-GKYEDFGVMREAIAAAKAEVVTVS------VRRVELKAPGHVG------------LLEALE--GVRLLP 68 (268)
T ss_dssp EECCSEEEEC-SSCSCHHHHHHHHHHTTCSEEEEE------EEECC-------C------------HHHHTT--TSEEEE
T ss_pred EeecceEEec-CCCCCHHHHHHHHHHhCCCEEEEE------ccccCCCCCCccc------------HHHHHh--hhhccC
Confidence 4667787754 456665 66777888899887533 1111000000011 223333 345666
Q ss_pred EECC-CCHHHHHHHHHHhhc--CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChH
Q 020428 81 QMGT-SDAVRALTAAKMVCK--DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQ 157 (326)
Q Consensus 81 Ql~g-~~~~~~~~aa~~~~~--~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~ 157 (326)
+-.| .+.++...++++..+ +-+.|.|..- .+. -.++.|+....+-.+.+.+. +..|.-.+. .
T Consensus 69 ntaG~~taeeAv~~a~lare~~gt~~iKlEvi-------~d~--~~l~pD~~~tv~aa~~L~k~-Gf~Vlpy~~--~--- 133 (268)
T 2htm_A 69 NTAGARTAEEAVRLARLGRLLTGERWVKLEVI-------PDP--TYLLPDPLETLKAAERLIEE-DFLVLPYMG--P--- 133 (268)
T ss_dssp BCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCC-------SCT--TTTCCCHHHHHHHHHHHHHT-TCEECCEEC--S---
T ss_pred cccCCCCHHHHHHHHHhhhHhcCcceeeeeec-------cCc--cccCcCHHHHHHHHHHHHHC-CCEEeeccC--C---
Confidence 6644 789999999998765 5667655321 111 12666776666666666443 333221221 2
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHH-hcC-CcEEEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVA-ALS-IPVIANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~-~~~-iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
..++++.+++.|++.|.--+..... ..+..+.+.++.+++ ..+ +|||..|||.|++|+..++ +.|||||++|+++
T Consensus 134 -D~~~ak~l~~~G~~aVmPlg~pIGs-G~Gi~~~~~L~~i~~~~~~~vPVI~~GGI~tpsDAa~Am-eLGAdgVlVgSAI 210 (268)
T 2htm_A 134 -DLVLAKRLAALGTATVMPLAAPIGS-GWGVRTRALLELFAREKASLPPVVVDAGLGLPSHAAEVM-ELGLDAVLVNTAI 210 (268)
T ss_dssp -CHHHHHHHHHHTCSCBEEBSSSTTT-CCCSTTHHHHHHHHHTTTTSSCBEEESCCCSHHHHHHHH-HTTCCEEEESHHH
T ss_pred -CHHHHHHHHhcCCCEEEecCccCcC-CcccCCHHHHHHHHHhcCCCCeEEEeCCCCCHHHHHHHH-HcCCCEEEEChHH
Confidence 2378999999999999554442221 234557888999998 678 9999999999999999999 6999999999997
Q ss_pred hc
Q 020428 236 LW 237 (326)
Q Consensus 236 l~ 237 (326)
..
T Consensus 211 ~~ 212 (268)
T 2htm_A 211 AE 212 (268)
T ss_dssp HT
T ss_pred hC
Confidence 63
No 139
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=98.77 E-value=7.3e-08 Score=92.95 Aligned_cols=124 Identities=9% Similarity=0.124 Sum_probs=105.5
Q ss_pred CCH-HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 85 SDA-VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 85 ~~~-~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
.++ +.+.+.|+.+.+ ||+.|.++.|+ +++...++++++|+++ ++++.+...-+|+.++++
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai 246 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD----------------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADAR 246 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC----------------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHH
Confidence 567 888888877665 99999998875 4678889999999987 688988888889999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++.++++|+++|- +. ..+.+++..+++++.++ +||++.+.+.|+++++++++...+|.|++-
T Consensus 247 ~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 311 (428)
T 3bjs_A 247 RVLPVLAEIQAGWLE-------EP-FACNDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPD 311 (428)
T ss_dssp HHHHHHHHTTCSCEE-------CC-SCTTCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCB
T ss_pred HHHHHHHhcCCCEEE-------CC-CCccCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 999999999999873 22 24568999999999999 999999999999999999965568988774
No 140
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=98.77 E-value=4.7e-08 Score=94.02 Aligned_cols=152 Identities=13% Similarity=0.052 Sum_probs=116.3
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccc---------c--------ccccccCChHHHHHHHHHH
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSG---------G--------MGAALLSKPELIHDILTML 138 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~---------~--------~G~~l~~~p~~~~~iv~~v 138 (326)
|+-..+.+.+++++.+.++...+ ||..+-+..|+|......+ . .+....++++...++++++
T Consensus 134 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~av 213 (418)
T 3r4e_A 134 MVYGHANGSDIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEEL 213 (418)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHH
Confidence 44445567889999888877654 9999999999975322100 0 0011122356778899999
Q ss_pred hhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHH
Q 020428 139 KRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDD 216 (326)
Q Consensus 139 ~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d 216 (326)
|+++ ++++.+....+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.|+++
T Consensus 214 R~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~ 285 (418)
T 3r4e_A 214 RKTYGFDHHLLHDGHHRYTPQEAANLGKMLEPYQLFWLE-------DC-TPAENQEAFRLVRQHTVTPLAVGEIFNTIWD 285 (418)
T ss_dssp HHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------SC-SCCSSGGGGHHHHHHCCSCEEECTTCCSGGG
T ss_pred HHHcCCCCeEEEeCCCCCCHHHHHHHHHHHHhhCCCEEE-------CC-CCccCHHHHHHHHhcCCCCEEEcCCcCCHHH
Confidence 9987 678999998899999999999999999999984 22 2445788899999999999999999999999
Q ss_pred HHHHHHhcCCcEEEeccchh
Q 020428 217 FQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 217 ~~~~l~~~Gad~VmiGr~~l 236 (326)
+.++++...+|.|++--+-.
T Consensus 286 ~~~~l~~~a~d~v~~k~~~~ 305 (418)
T 3r4e_A 286 AKDLIQNQLIDYIRATVVGA 305 (418)
T ss_dssp THHHHHTTCCSEECCCTTTT
T ss_pred HHHHHHcCCCCeEecCcccc
Confidence 99999766689998864433
No 141
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=98.77 E-value=7.6e-09 Score=91.92 Aligned_cols=86 Identities=27% Similarity=0.367 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
+++.++++.++++|+|+|+++...... +..+..++.++++++.+++||+++|+|.+++++++++ ..|||+|++|+.++
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~-~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~-~~Gad~V~i~~~~~ 110 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAP-EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLF-RAGADKVSVNTAAV 110 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCT-TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHH-HHTCSEEEESHHHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccc-cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEEChHHh
Confidence 367899999999999999999765543 2233467889999999999999999999999999999 58999999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.+|+++.+
T Consensus 111 ~~~~~~~~ 118 (253)
T 1h5y_A 111 RNPQLVAL 118 (253)
T ss_dssp HCTHHHHH
T ss_pred hCcHHHHH
Confidence 99987654
No 142
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=98.75 E-value=1.7e-08 Score=91.02 Aligned_cols=86 Identities=16% Similarity=0.136 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.++.++++.++++|++.|.++......... ..+++.++++++.+++||+++|||.+.+++.+++ ..|||+|++|+.++
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~-g~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~-~~Gad~v~lg~~~~ 107 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS-GYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADKALAASVFH 107 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCSS-CCCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHH-HHTCSEEECCCCC-
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCCC-cccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCcHhhhhHHHH
Confidence 468999999999999999998877654433 3579999999999999999999999999999999 58999999999999
Q ss_pred -c--Ccccccc
Q 020428 237 -W--NASIFSS 244 (326)
Q Consensus 237 -~--~P~lf~~ 244 (326)
. +|+.+.+
T Consensus 108 ~~~~~~~~~~~ 118 (266)
T 2w6r_A 108 FREIDMRELKE 118 (266)
T ss_dssp -----CHHHHH
T ss_pred hCCCCHHHHHH
Confidence 5 8877765
No 143
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=98.74 E-value=9.6e-09 Score=91.46 Aligned_cols=84 Identities=20% Similarity=0.222 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
++.++++.++++|+|+|+++..+.... ..+.+ +.++++++.+++|++++|||.|++++..++ ..|||+|++|+.++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~-~~~~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l-~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFG-TGDNR-ALIAEVAQAMDIKVELSGGIRDDDTLAAAL-ATGCTRVNLGTAALE 109 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHT-SCCCH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhc-CCChH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHH-HcCCCEEEECchHhh
Confidence 678899999999999999987654321 22445 889999999999999999999999999999 589999999999999
Q ss_pred Ccccccc
Q 020428 238 NASIFSS 244 (326)
Q Consensus 238 ~P~lf~~ 244 (326)
+|+++.+
T Consensus 110 ~p~~~~~ 116 (244)
T 1vzw_A 110 TPEWVAK 116 (244)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9987654
No 144
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=98.73 E-value=1.7e-07 Score=89.87 Aligned_cols=138 Identities=18% Similarity=0.191 Sum_probs=110.7
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCcccccccccccc-ccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAA-LLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~-l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
.+++++++.++.+.+ ||..+-++.|+|... ..|.. ...+++...+.++++|+++ ++++.+....+|+.++++
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~----~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~ 218 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTA----YSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAI 218 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBT----TCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCcc----ccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 578988887776654 999999999987541 11211 1123667788899999987 578999888899999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
++++.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.|++++.++++...+|.|++--+
T Consensus 219 ~~~~~L~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 284 (412)
T 4e4u_A 219 RLAKRLEKYDPLWFE-------E-PVPPGQEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNVA 284 (412)
T ss_dssp HHHHHHGGGCCSEEE-------C-CSCSSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHHhhhcCCcEEE-------C-CCChhhHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 999999999999985 2 23455899999999999999999999999999999997666899877543
No 145
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=98.73 E-value=1.1e-07 Score=93.14 Aligned_cols=129 Identities=18% Similarity=0.127 Sum_probs=90.7
Q ss_pred HHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHc
Q 020428 92 TAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKT 169 (326)
Q Consensus 92 ~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~ 169 (326)
+.++.+.+ |+|.|.++.. + .+++...+.++.+++.+ ++|+..+-- .+.+.++.+.++
T Consensus 236 ~~a~~l~~~G~d~ivi~~a-----------~----g~~~~~~~~i~~l~~~~p~~pvi~G~v------~t~~~a~~~~~~ 294 (491)
T 1zfj_A 236 ERAEALFEAGADAIVIDTA-----------H----GHSAGVLRKIAEIRAHFPNRTLIAGNI------ATAEGARALYDA 294 (491)
T ss_dssp HHHHHHHHHTCSEEEECCS-----------C----TTCHHHHHHHHHHHHHCSSSCEEEEEE------CSHHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEeee-----------c----CcchhHHHHHHHHHHHCCCCcEeCCCc------cCHHHHHHHHHc
Confidence 33444444 9999888741 1 13445667888888887 889885432 123667788899
Q ss_pred CCcEEEEeec------ccCCCCCCcCCHHHHHHHHH---hcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 170 GVSALAVHGR------KVADRPRDPAKWGEIADIVA---ALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 170 G~d~i~vh~r------~~~~~~~~~~~~~~i~~i~~---~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
|+|+|.+... +......+.+..+.+.++.+ ..++|||+.|||++++|+.+++ ..|||+|++||+++..++
T Consensus 295 Gad~I~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal-~~GA~~v~vG~~~~~~~e 373 (491)
T 1zfj_A 295 GVDVVKVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKAL-AAGGNAVMLGSMFAGTDE 373 (491)
T ss_dssp TCSEEEECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTTTBSS
T ss_pred CCCEEEECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHH-HcCCcceeeCHHhhCCCc
Confidence 9999988410 11001123446777777765 4689999999999999999999 589999999999997654
Q ss_pred cc
Q 020428 241 IF 242 (326)
Q Consensus 241 lf 242 (326)
..
T Consensus 374 ~~ 375 (491)
T 1zfj_A 374 AP 375 (491)
T ss_dssp CC
T ss_pred Cc
Confidence 33
No 146
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=98.73 E-value=1.7e-07 Score=82.73 Aligned_cols=132 Identities=16% Similarity=0.194 Sum_probs=94.3
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C-CChHHHHHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L-KSSQDTVELARR 165 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g-~~~~~~~e~a~~ 165 (326)
...++.+.+..|+|.||+.+ +.|.....+.+.+.+-+.++++.++- ..+|.=+ + .+.++....++.
T Consensus 97 Kv~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~-~~lKVIlEt~~Lt~eei~~a~~i 165 (239)
T 3ngj_A 97 KAYETKVAVEQGAEEVDMVI----------NIGMVKAKKYDDVEKDVKAVVDASGK-ALTKVIIECCYLTNEEKVEVCKR 165 (239)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHHTT-SEEEEECCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEe----------ehHHhccccHHHHHHHHHHHHHHhcC-CceEEEEecCCCCHHHHHHHHHH
Confidence 34455555666999999865 35555567888888888999888741 2344322 2 456678888899
Q ss_pred HHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCc--EEEeccchh
Q 020428 166 IEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGAS--SVMAARGAL 236 (326)
Q Consensus 166 l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad--~VmiGr~~l 236 (326)
..++|+|+|-.+ .+...+.+..+.++.+++.+ +++|.++|||+|.+|+.+++ ..||+ |+..|+.++
T Consensus 166 a~~aGADfVKTS----TGf~~ggAt~~dv~lmr~~vg~~v~VKasGGIrt~~da~~~i-~aGA~riGtS~~~~I~ 235 (239)
T 3ngj_A 166 CVAAGAEYVKTS----TGFGTHGATPEDVKLMKDTVGDKALVKAAGGIRTFDDAMKMI-NNGASRIGASAGIAIL 235 (239)
T ss_dssp HHHHTCSEEECC----CSSSSCCCCHHHHHHHHHHHGGGSEEEEESSCCSHHHHHHHH-HTTEEEEEESCHHHHH
T ss_pred HHHHCcCEEECC----CCCCCCCCCHHHHHHHHHhhCCCceEEEeCCCCCHHHHHHHH-HhcccceecccHHHHH
Confidence 999999999654 22223456677776666654 69999999999999999999 69999 555554444
No 147
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=98.71 E-value=4e-07 Score=82.42 Aligned_cols=135 Identities=18% Similarity=0.196 Sum_probs=97.6
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
+.|+...=|.-++.+..++. .-|+|+|=|... .+ .++.+.++++..++ .++.+.+-+.
T Consensus 113 ~lPvl~kdfiid~~qv~~A~---~~GAD~VlLi~a--------------~l-~~~~l~~l~~~a~~-lGl~~lvev~--- 170 (272)
T 3qja_A 113 SIPVLRKDFVVQPYQIHEAR---AHGADMLLLIVA--------------AL-EQSVLVSMLDRTES-LGMTALVEVH--- 170 (272)
T ss_dssp SSCEEEESCCCSHHHHHHHH---HTTCSEEEEEGG--------------GS-CHHHHHHHHHHHHH-TTCEEEEEES---
T ss_pred CCCEEECccccCHHHHHHHH---HcCCCEEEEecc--------------cC-CHHHHHHHHHHHHH-CCCcEEEEcC---
Confidence 35777655667776554443 248999887532 11 25567777777765 4777766552
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+ .+.+..+.+.|+|.|-+++|.... -+.+++.+.++.+.+ ++||++.|||.|++|+.++. ..|+|||.||
T Consensus 171 t----~ee~~~A~~~Gad~IGv~~r~l~~---~~~dl~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~-~~GadgvlVG 242 (272)
T 3qja_A 171 T----EQEADRALKAGAKVIGVNARDLMT---LDVDRDCFARIAPGLPSSVIRIAESGVRGTADLLAYA-GAGADAVLVG 242 (272)
T ss_dssp S----HHHHHHHHHHTCSEEEEESBCTTT---CCBCTTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHH-HTTCSEEEEC
T ss_pred C----HHHHHHHHHCCCCEEEECCCcccc---cccCHHHHHHHHHhCcccCEEEEECCCCCHHHHHHHH-HcCCCEEEEc
Confidence 2 233455557899999999875432 235678888888887 79999999999999999999 6999999999
Q ss_pred cchhcCc
Q 020428 233 RGALWNA 239 (326)
Q Consensus 233 r~~l~~P 239 (326)
++++..+
T Consensus 243 sal~~a~ 249 (272)
T 3qja_A 243 EGLVTSG 249 (272)
T ss_dssp HHHHTCS
T ss_pred HHHhCCC
Confidence 9998755
No 148
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=98.71 E-value=2.8e-07 Score=82.21 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=97.6
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhccc-CcEEEEecCC-CChHHHHHHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLD-VPVTCKIRLL-KSSQDTVELARRI 166 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~g-~~~~~~~e~a~~l 166 (326)
...++...+..|+|.||+-+ ..|...-.+.+.+.+-+.++++.++ .|+-|=+-.+ .+.++....++..
T Consensus 113 Kv~Ea~~Ai~~GAdEIDmVi----------Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~A~~ia 182 (260)
T 3r12_A 113 KAHEAIFAVESGADEIDMVI----------NVGMLKAKEWEYVYEDIRSVVESVKGKVVKVIIETCYLDTEEKIAACVIS 182 (260)
T ss_dssp HHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEe----------ehhhhccccHHHHHHHHHHHHHhcCCCcEEEEEeCCCCCHHHHHHHHHHH
Confidence 34455555666999999864 3566666788889888999988874 4443333333 4567788888999
Q ss_pred HHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCc--EEEeccchhc
Q 020428 167 EKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGAS--SVMAARGALW 237 (326)
Q Consensus 167 ~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad--~VmiGr~~l~ 237 (326)
.++|+|+|-.+ .+...+.+..+.++.+++.+ ++||-++|||+|.+|+.+++ +.||+ |...|+.++.
T Consensus 183 ~eaGADfVKTS----TGf~~~GAT~edV~lm~~~vg~~v~VKaAGGIrt~~~al~mi-~aGA~RiGtS~g~~I~~ 252 (260)
T 3r12_A 183 KLAGAHFVKTS----TGFGTGGATAEDVHLMKWIVGDEMGVKASGGIRTFEDAVKMI-MYGADRIGTSSGVKIVQ 252 (260)
T ss_dssp HHTTCSEEECC----CSSSSCCCCHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEESCHHHHHH
T ss_pred HHhCcCEEEcC----CCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HcCCceeecchHHHHHH
Confidence 99999999543 33334556677777777665 69999999999999999999 69999 6666665553
No 149
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=98.68 E-value=2.9e-07 Score=80.08 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=94.4
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCcccc----ccccccccc------cCChHHHHHHHHH-------
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFS----VSGGMGAAL------LSKPELIHDILTM------- 137 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~----~~~~~G~~l------~~~p~~~~~iv~~------- 137 (326)
.|++..|.+.+++++.+.++.+.+ |++.|++...+|.... ..+.++..+ ..+++.+...++.
T Consensus 7 ~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 7 LPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIVT 86 (212)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTSTTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEEC
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEEe
Confidence 589999999999999999988876 8999999887764210 111122111 1233332222111
Q ss_pred ---------HhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC--CcEE
Q 020428 138 ---------LKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS--IPVI 206 (326)
Q Consensus 138 ---------v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~--iPVi 206 (326)
..+..+.++.+.+ . +. +.+....+.|+|+|.++.. .+..++.++++++.++ +||+
T Consensus 87 ~~~~~~~~~~~~~~g~~~~~g~---~---t~-~e~~~a~~~G~d~v~v~~t-------~~~g~~~~~~l~~~~~~~ipvi 152 (212)
T 2v82_A 87 PNIHSEVIRRAVGYGMTVCPGC---A---TA-TEAFTALEAGAQALKIFPS-------SAFGPQYIKALKAVLPSDIAVF 152 (212)
T ss_dssp SSCCHHHHHHHHHTTCEEECEE---C---SH-HHHHHHHHTTCSEEEETTH-------HHHCHHHHHHHHTTSCTTCEEE
T ss_pred CCCCHHHHHHHHHcCCCEEeec---C---CH-HHHHHHHHCCCCEEEEecC-------CCCCHHHHHHHHHhccCCCeEE
Confidence 0001122221111 1 11 2234556788888887431 1235788899988876 9999
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+.|||. .+++.+++ ..||++|.+|++++..
T Consensus 153 a~GGI~-~~~i~~~~-~~Ga~gv~vGsai~~~ 182 (212)
T 2v82_A 153 AVGGVT-PENLAQWI-DAGCAGAGLGSDLYRA 182 (212)
T ss_dssp EESSCC-TTTHHHHH-HHTCSEEEECTTTCCT
T ss_pred EeCCCC-HHHHHHHH-HcCCCEEEEChHHhCC
Confidence 999997 99999999 5899999999998765
No 150
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=98.68 E-value=4.4e-07 Score=82.07 Aligned_cols=133 Identities=11% Similarity=0.078 Sum_probs=93.9
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C-CChHHHHHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L-KSSQDTVELARR 165 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g-~~~~~~~e~a~~ 165 (326)
...++...++.|+|.||+-+ .+|...-.+.+.+.+-+.++++.++-| .+|+=+ + .+.++....++.
T Consensus 128 Kv~Ea~~Ai~~GAdEIDmVI----------Nig~lk~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~i 196 (288)
T 3oa3_A 128 KVSEAKRAMQNGASELDMVM----------NYPWLSEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVL 196 (288)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEe----------ehhhhcCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHH
Confidence 44455555666999999543 245555567888999999999988655 355543 2 456677788899
Q ss_pred HHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHh--cCCcEEEeCCCCCHHHHHHHHHhcCCc--EEEeccchhc
Q 020428 166 IEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAA--LSIPVIANGDVFEYDDFQRIKTAAGAS--SVMAARGALW 237 (326)
Q Consensus 166 l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~--~~iPVi~nGgI~s~~d~~~~l~~~Gad--~VmiGr~~l~ 237 (326)
..++|+|+|--+ .+...+.+ +.++++++.+. .++||.++|||+|.+|+.+++ +.||+ |...|+.++.
T Consensus 197 a~eaGADfVKTS----TGf~~~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi-~aGA~RiGtS~g~~I~~ 270 (288)
T 3oa3_A 197 SSLAGADYVKTS----TGFNGPGASIENVSLMSAVCDSLQSETRVKASGGIRTIEDCVKMV-RAGAERLGASAGVKIVN 270 (288)
T ss_dssp HHHTTCSEEECC----CSSSSCCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSHHHHHHHH-HTTCSEEEESCHHHHHH
T ss_pred HHHcCCCEEEcC----CCCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HcCCceeehhhHHHHHH
Confidence 999999999543 11112333 45555555542 479999999999999999999 69999 6666666554
No 151
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=98.68 E-value=2.7e-07 Score=89.30 Aligned_cols=125 Identities=10% Similarity=0.141 Sum_probs=105.6
Q ss_pred CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 84 TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
+.+++++.+.|+.+.+ ||+.|.|+.|+ +++...+.++++|+++ ++++.+...-+|+.++++
T Consensus 196 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~----------------~~~~d~e~v~avR~a~G~d~~l~vDan~~~~~~~a~ 259 (441)
T 2hxt_A 196 GYSDEKLVRLAKEAVADGFRTIKLKVGA----------------NVQDDIRRCRLARAAIGPDIAMAVDANQRWDVGPAI 259 (441)
T ss_dssp TSCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEccCC----------------CHHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHH
Confidence 3588989888887665 99999998873 3677788999999987 578888888889999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++.++++|+++|- +. ..+.+++..+++++.+ ++||++.+.+++++++.++++...+|.|++-
T Consensus 260 ~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik 324 (441)
T 2hxt_A 260 DWMRQLAEFDIAWIE-------EP-TSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQID 324 (441)
T ss_dssp HHHHTTGGGCCSCEE-------CC-SCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCC
T ss_pred HHHHHHHhcCCCeee-------CC-CCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999873 22 2355899999999988 6999999999999999999977778999885
No 152
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=98.68 E-value=1.6e-07 Score=90.35 Aligned_cols=154 Identities=8% Similarity=0.050 Sum_probs=116.2
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccc------ccccccccc--CChHHHHHHHHHHhhcc--cCc
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSV------SGGMGAALL--SKPELIHDILTMLKRNL--DVP 145 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~------~~~~G~~l~--~~p~~~~~iv~~v~~~~--~~p 145 (326)
|+-..+.+.+++++.+.++.+.+ ||..|-+..|++..... ...-|..+. ..++...++++++|+++ +++
T Consensus 145 ~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~ 224 (422)
T 3tji_A 145 PAYSHASGETLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLH 224 (422)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCE
Confidence 44444567889988888776654 99999999987531100 001111111 12456778899999987 688
Q ss_pred EEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcC
Q 020428 146 VTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAG 225 (326)
Q Consensus 146 v~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~G 225 (326)
+.+....+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.|++++.++++...
T Consensus 225 L~vDaN~~~~~~~A~~~~~~Le~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~~ga 296 (422)
T 3tji_A 225 ILHDVHERLFPQQAVQLAKQLEPFQPYFIE-------DI-LPPQQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIVNRR 296 (422)
T ss_dssp EEEECTTCSCHHHHHHHHHHHGGGCCSEEE-------CC-SCGGGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHHTTC
T ss_pred EEEECCCCCCHHHHHHHHHHHHhhCCCeEE-------CC-CChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCC
Confidence 999998899999999999999999999984 22 2345788899999999999999999999999999997667
Q ss_pred CcEEEeccchhcC
Q 020428 226 ASSVMAARGALWN 238 (326)
Q Consensus 226 ad~VmiGr~~l~~ 238 (326)
+|.|++--+-.+.
T Consensus 297 ~d~v~~k~~~~GG 309 (422)
T 3tji_A 297 IDFIRCHVSQIGG 309 (422)
T ss_dssp CSEECCCGGGGTS
T ss_pred CCEEecCccccCC
Confidence 8999887554444
No 153
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=98.67 E-value=2.1e-07 Score=84.10 Aligned_cols=158 Identities=12% Similarity=0.199 Sum_probs=102.2
Q ss_pred cEEEEECC--CCHHHHHHHHHHhhc-CCCEEEEccC--CCcc--cccccccccccc--CChHHHHHHHHHHhhc-ccCcE
Q 020428 77 HVVFQMGT--SDAVRALTAAKMVCK-DVAAIDINMG--CPKS--FSVSGGMGAALL--SKPELIHDILTMLKRN-LDVPV 146 (326)
Q Consensus 77 p~~vQl~g--~~~~~~~~aa~~~~~-~~d~idlN~g--cP~~--~~~~~~~G~~l~--~~p~~~~~iv~~v~~~-~~~pv 146 (326)
.++.=|.. .+.+...+.++.+.+ |+|.|||++- -|.. .+...-.-.+|- -+.+.+.++++++|+. +++|+
T Consensus 21 ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pi 100 (271)
T 3nav_A 21 AFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPI 100 (271)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCE
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCE
Confidence 35554533 456889999998877 8999999752 2221 000000000010 2456778899999987 78998
Q ss_pred EEEecCCCChH---HHHHHHHHHHHcCCcEEEEeecccC------------------------------------C----
Q 020428 147 TCKIRLLKSSQ---DTVELARRIEKTGVSALAVHGRKVA------------------------------------D---- 183 (326)
Q Consensus 147 ~vK~r~g~~~~---~~~e~a~~l~~~G~d~i~vh~r~~~------------------------------------~---- 183 (326)
.+-. .+++- ....+++.+.++|+|.+++..-..+ .
T Consensus 101 vlm~--Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~gfiY 178 (271)
T 3nav_A 101 GLLM--YANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTY 178 (271)
T ss_dssp EEEE--CHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCSCEE
T ss_pred EEEe--cCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCCeEE
Confidence 8743 12221 2466778888888888775311100 0
Q ss_pred -----CCCCc------CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 184 -----RPRDP------AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 184 -----~~~~~------~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
..+|. ...+.++++++.+++||+..+||.|++++.+.+ ..|||||.||+++..
T Consensus 179 ~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~-~~gADgvIVGSAiv~ 242 (271)
T 3nav_A 179 LLSRAGVTGAETKANMPVHALLERLQQFDAPPALLGFGISEPAQVKQAI-EAGAAGAISGSAVVK 242 (271)
T ss_dssp ECCCC--------CCHHHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHH-HTTCSEEEESHHHHH
T ss_pred EEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHH-HcCCCEEEECHHHHH
Confidence 01111 124678889988899999999999999999888 589999999999874
No 154
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=98.67 E-value=2.6e-08 Score=88.90 Aligned_cols=86 Identities=14% Similarity=0.228 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.+++++|+.+.+.|+|.+++-.-++... ..+.+++.++++.+.+.+|+...|||+|.+++++++ ..|||-|.+|+.++
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a~~-~~~~~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l-~~GadkVii~t~a~ 108 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGAKD-PSKRQFALIEKLAKEVSVNLQVGGGIRSKEEVKALL-DCGVKRVVIGSMAI 108 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHHHC-GGGCCHHHHHHHHHHCCSEEEEESSCCCHHHHHHHH-HTTCSEEEECTTTT
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccc-cchhHHHHHHHHHHhcCCCeEeccccccHHHHHHHH-HcCCCEEEEccccc
Confidence 4688999999999999999876654322 346689999999999999999999999999999999 69999999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.||.++.+
T Consensus 109 ~~p~li~e 116 (243)
T 4gj1_A 109 KDATLCLE 116 (243)
T ss_dssp TCHHHHHH
T ss_pred cCCchHHH
Confidence 99998754
No 155
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=98.67 E-value=3.4e-07 Score=80.57 Aligned_cols=133 Identities=17% Similarity=0.219 Sum_probs=98.0
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C-C----ChHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L-K----SSQDTVE 161 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g-~----~~~~~~e 161 (326)
...++...++.|+|.||+.+ ++|...-.+.+.+.+-+.++++.++ ...+|.=+ + . ++++...
T Consensus 82 K~~E~~~Ai~~GAdEIDmVi----------nig~lk~g~~~~v~~ei~~v~~a~~-~~~lKvIiEt~~L~~~~t~eei~~ 150 (231)
T 3ndo_A 82 KATEAELAVAAGATEIDMVI----------DVGAALAGDLDAVSADITAVRKAVR-AATLKVIVESAALLEFSGEPLLAD 150 (231)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTT-TSEEEEECCHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEe----------ehHhhhcccHHHHHHHHHHHHHHcc-CCceEEEEECcccCCCCCHHHHHH
Confidence 44455555666999999865 3666666788999999999998884 22335433 2 3 6677788
Q ss_pred HHHHHHHcCCcEEEEeecccCCCC-CCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCc--EEEeccchh
Q 020428 162 LARRIEKTGVSALAVHGRKVADRP-RDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGAS--SVMAARGAL 236 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~-~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad--~VmiGr~~l 236 (326)
.++...++|+|+|-. ..+.. .+.+..+.++.+++.+ +++|-++|||+|.+|+.+++ +.||+ |+..|+.++
T Consensus 151 a~~ia~~aGADfVKT----STGf~~~~gAt~edv~lm~~~v~~~v~VKaaGGIrt~~~a~~~i-~aGa~RiGtS~g~~I~ 225 (231)
T 3ndo_A 151 VCRVARDAGADFVKT----STGFHPSGGASVQAVEIMARTVGERLGVKASGGIRTAEQAAAML-DAGATRLGLSGSRAVL 225 (231)
T ss_dssp HHHHHHHTTCSEEEC----CCSCCTTCSCCHHHHHHHHHHHTTTSEEEEESSCCSHHHHHHHH-HTTCSEEEESSHHHHH
T ss_pred HHHHHHHHCcCEEEc----CCCCCCCCCCCHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HhcchhcccchHHHHH
Confidence 889999999999943 33322 3556677777777665 69999999999999999999 69999 777666655
Q ss_pred c
Q 020428 237 W 237 (326)
Q Consensus 237 ~ 237 (326)
.
T Consensus 226 ~ 226 (231)
T 3ndo_A 226 D 226 (231)
T ss_dssp H
T ss_pred h
Confidence 3
No 156
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=98.65 E-value=2.4e-07 Score=80.40 Aligned_cols=140 Identities=12% Similarity=0.095 Sum_probs=95.4
Q ss_pred CCcEEEEECCCC-HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 75 RNHVVFQMGTSD-AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 75 ~~p~~vQl~g~~-~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
+.|+.+.+.-.+ ++.+.+.+ +..|+|+|-++... ..+.+.++++.+++. +.++.+-+..
T Consensus 53 ~~~i~~~~~~~~~~~~~~~~~--~~~Gad~v~v~~~~----------------~~~~~~~~~~~~~~~-g~~~~v~~~~- 112 (211)
T 3f4w_A 53 HKEVLADAKIMDGGHFESQLL--FDAGADYVTVLGVT----------------DVLTIQSCIRAAKEA-GKQVVVDMIC- 112 (211)
T ss_dssp TSEEEEEEEECSCHHHHHHHH--HHTTCSEEEEETTS----------------CHHHHHHHHHHHHHH-TCEEEEECTT-
T ss_pred CCEEEEEEEeccchHHHHHHH--HhcCCCEEEEeCCC----------------ChhHHHHHHHHHHHc-CCeEEEEecC-
Confidence 357877764444 44433322 22399999986431 124456666666654 6666553221
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.+..+.++.+.+.|+|+|.++.....+.. ++..++.++++++.+ ++||++.|||+ ++++.+++ ..|||+|++|
T Consensus 113 --~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~-~~~~~~~i~~l~~~~~~~~i~~~gGI~-~~~~~~~~-~~Gad~vvvG 187 (211)
T 3f4w_A 113 --VDDLPARVRLLEEAGADMLAVHTGTDQQAA-GRKPIDDLITMLKVRRKARIAVAGGIS-SQTVKDYA-LLGPDVVIVG 187 (211)
T ss_dssp --CSSHHHHHHHHHHHTCCEEEEECCHHHHHT-TCCSHHHHHHHHHHCSSCEEEEESSCC-TTTHHHHH-TTCCSEEEEC
T ss_pred --CCCHHHHHHHHHHcCCCEEEEcCCCccccc-CCCCHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHH-HcCCCEEEEC
Confidence 224567788999999999988733222221 234688999999886 89999999996 99999999 6899999999
Q ss_pred cchhcCc
Q 020428 233 RGALWNA 239 (326)
Q Consensus 233 r~~l~~P 239 (326)
|+++..+
T Consensus 188 sai~~~~ 194 (211)
T 3f4w_A 188 SAITHAA 194 (211)
T ss_dssp HHHHTCS
T ss_pred HHHcCCC
Confidence 9988654
No 157
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=98.65 E-value=9.9e-08 Score=83.22 Aligned_cols=86 Identities=16% Similarity=0.139 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.+..++++.+...|+..+.+++++..+...+. +++.+.++++..++|||+.||+.+++++.+++ ..|+|+|++|++++
T Consensus 130 ~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~-~~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~-~~G~~~~~vg~a~~ 207 (237)
T 3cwo_X 130 ILLRDWVVEVEKRGAGEILLTSIDRDGTKSGY-DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAF-LAGADAALAASVFH 207 (237)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTTTCCSCC-CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHH-HHTCSEEEESHHHH
T ss_pred cCHHHHHHHHhhcCCCeEEEEecCCCCccccc-cHHHHHHHHHhcCCCEEecCCCCCHHHHHHHH-HcCcHHHhhhHHHH
Confidence 35788899999999999999987555555555 48999999999999999999999999999999 58999999999999
Q ss_pred cCcccccc
Q 020428 237 WNASIFSS 244 (326)
Q Consensus 237 ~~P~lf~~ 244 (326)
.+|+.+.+
T Consensus 208 ~~~~~~~~ 215 (237)
T 3cwo_X 208 FREIDVRE 215 (237)
T ss_dssp TTSSCHHH
T ss_pred cCCCCHHH
Confidence 99987665
No 158
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=98.64 E-value=1.8e-07 Score=83.03 Aligned_cols=55 Identities=7% Similarity=0.119 Sum_probs=50.5
Q ss_pred cCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc-cccc
Q 020428 188 PAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS-IFSS 244 (326)
Q Consensus 188 ~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~-lf~~ 244 (326)
+.+.++++++++.+ ++||++.|||+|++++++++ . |||+|++|+++..+|. ++++
T Consensus 167 ~~~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~-~-gAd~VIVGSa~v~~~~~~~~~ 223 (240)
T 1viz_A 167 LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-E-HADVIVVGNAVYEDFDRALKT 223 (240)
T ss_dssp CCCHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHH-T-TCSEEEECTHHHHCHHHHHTH
T ss_pred cChHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHH-h-CCCEEEEChHHHhCHHHHHHH
Confidence 55789999999999 99999999999999999998 5 9999999999999998 6664
No 159
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=98.64 E-value=2.9e-07 Score=87.78 Aligned_cols=125 Identities=11% Similarity=0.124 Sum_probs=105.2
Q ss_pred CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 84 TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
|.+++++.+.++.+.+ ||..+.+.+|+ +++.-.+.++++|+++ ++++.+....+|+.++++
T Consensus 153 g~~~e~~~~~a~~~~~~G~~~iKlK~g~----------------~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~ 216 (392)
T 3ddm_A 153 GINPENPEDVVARKAAEGYRAFKLKVGF----------------DDARDVRNALHVRELLGAATPLMADANQGWDLPRAR 216 (392)
T ss_dssp EECSSSHHHHHHHHHHHTCCCEEEECSS----------------CHHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCC----------------CHHHHHHHHHHHHHhcCCCceEEEeCCCCCCHHHHH
Confidence 3447778777776655 99999998874 4667788899999987 678999999899999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCC-HHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAK-WGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~-~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++.+++.|+++|. + +..+.+ ++..+++++.+++||++.+.+.|.+++.++++...+|.|++-
T Consensus 217 ~~~~~L~~~~i~~iE-------e-P~~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k 281 (392)
T 3ddm_A 217 QMAQRLGPAQLDWLE-------E-PLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPD 281 (392)
T ss_dssp HHHHHHGGGCCSEEE-------C-CSCTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHhCCCEEE-------C-CCCccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 999999999999984 2 234557 999999999999999999999999999999976678988775
No 160
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=98.62 E-value=5.5e-07 Score=85.08 Aligned_cols=134 Identities=13% Similarity=0.193 Sum_probs=109.6
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+...++..+++.+.+.++... .||..+-+..|+ +++.-.+.++++|+++ ++++.+...-+
T Consensus 131 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~~K~KvG~----------------~~~~d~~~v~avR~~~g~~~~l~vDaN~~ 194 (368)
T 3q45_A 131 QTDYTVSIDEPHKMAADAVQIKKNGFEIIKVKVGG----------------SKELDVERIRMIREAAGDSITLRIDANQG 194 (368)
T ss_dssp EBCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHCSSSEEEEECTTC
T ss_pred eeEEEecCCCHHHHHHHHHHHHHcCCCeEEEEecC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 3445666778998887777654 599999998764 2566678899999887 67888888889
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
|+.++++++++.+++.|+++|- + +..+.+++..+++++.+++||.+.+.+.+++++.++++...+|.|++--
T Consensus 195 ~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~ 266 (368)
T 3q45_A 195 WSVETAIETLTLLEPYNIQHCE-------E-PVSRNLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKL 266 (368)
T ss_dssp BCHHHHHHHHHHHGGGCCSCEE-------C-CBCGGGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECT
T ss_pred CChHHHHHHHHHHhhcCCCEEE-------C-CCChhHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEech
Confidence 9999999999999999999984 2 2244578889999999999999999999999999999766789998763
Q ss_pred c
Q 020428 234 G 234 (326)
Q Consensus 234 ~ 234 (326)
+
T Consensus 267 ~ 267 (368)
T 3q45_A 267 S 267 (368)
T ss_dssp T
T ss_pred h
Confidence 3
No 161
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=98.62 E-value=6.7e-07 Score=85.20 Aligned_cols=138 Identities=9% Similarity=0.169 Sum_probs=112.9
Q ss_pred cEEEEEC----CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEE-E
Q 020428 77 HVVFQMG----TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVT-C 148 (326)
Q Consensus 77 p~~vQl~----g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~-v 148 (326)
|+-..++ ..+++.+.+.++.+.+ |+..+.+++|+ +++.-.+.++++|+++ ++++. +
T Consensus 129 ~~y~t~~~~~~~~~~e~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avR~a~g~~~~l~~v 192 (391)
T 3gd6_A 129 KVCYPIFRHRFSEEVESNLDVVRQKLEQGFDVFRLYVGK----------------NLDADEEFLSRVKEEFGSRVRIKSY 192 (391)
T ss_dssp EBCEEECCCSSTTHHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHGGGCEEEEE
T ss_pred EeeEEecccccCCCHHHHHHHHHHHHHcCCCEEEEeeCC----------------CHHHHHHHHHHHHHHcCCCCcEEEe
Confidence 4455666 6788888888776654 99999999875 2566678889999887 57888 8
Q ss_pred EecCCCChHHHHHHHHHHHHcCC--cEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCC
Q 020428 149 KIRLLKSSQDTVELARRIEKTGV--SALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGA 226 (326)
Q Consensus 149 K~r~g~~~~~~~e~a~~l~~~G~--d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Ga 226 (326)
....+|+.+++.++++.+++.|+ ++|. +. ..+.+++..+++++.+++|| .+.+.+.+++.++++...+
T Consensus 193 Dan~~~~~~~A~~~~~~l~~~~i~~~~iE-------qP-~~~~d~~~~~~l~~~~~iPI--dE~~~~~~~~~~~~~~~~~ 262 (391)
T 3gd6_A 193 DFSHLLNWKDAHRAIKRLTKYDLGLEMIE-------SP-APRNDFDGLYQLRLKTDYPI--SEHVWSFKQQQEMIKKDAI 262 (391)
T ss_dssp ECTTCSCHHHHHHHHHHHTTCCSSCCEEE-------CC-SCTTCHHHHHHHHHHCSSCE--EEECCCHHHHHHHHHHTCC
T ss_pred cCCCCcCHHHHHHHHHHHHhcCCCcceec-------CC-CChhhHHHHHHHHHHcCCCc--CCCCCCHHHHHHHHHcCCC
Confidence 88889999999999999999999 8874 22 23558999999999999999 8899999999999977779
Q ss_pred cEEEeccchhcCcc
Q 020428 227 SSVMAARGALWNAS 240 (326)
Q Consensus 227 d~VmiGr~~l~~P~ 240 (326)
|.|++--+-.+...
T Consensus 263 d~v~~k~~~~GGit 276 (391)
T 3gd6_A 263 DIFNISPVFIGGLT 276 (391)
T ss_dssp SEEEECHHHHTSHH
T ss_pred CEEEECchhcCCHH
Confidence 99999876665543
No 162
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=98.61 E-value=2.5e-07 Score=88.24 Aligned_cols=102 Identities=21% Similarity=0.401 Sum_probs=81.7
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCc-CCHHHHHHHHHhcCCcE
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDP-AKWGEIADIVAALSIPV 205 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~-~~~~~i~~i~~~~~iPV 205 (326)
+++.+.++++.+++. +.|+.++++. ....+.++.+.++|+|.+.+|++...+.+..+ .+|+.+.++++.+++||
T Consensus 140 d~~~~~~~i~~~~~~-g~~v~~~v~~----~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~~~pv 214 (393)
T 2qr6_A 140 DTELLSERIAQVRDS-GEIVAVRVSP----QNVREIAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSLDVPV 214 (393)
T ss_dssp CHHHHHHHHHHHHHT-TSCCEEEECT----TTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHCSSCE
T ss_pred CHHHHHHHHHHHhhc-CCeEEEEeCC----ccHHHHHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhcCCCE
Confidence 889999999999886 8999998864 24567788888999999999977533333333 37888899999999999
Q ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 206 IANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 206 i~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
++ |||.|++++..++ +.|||+|++|+|.
T Consensus 215 i~-ggi~t~e~a~~~~-~~Gad~i~vg~Gg 242 (393)
T 2qr6_A 215 IA-GGVNDYTTALHMM-RTGAVGIIVGGGE 242 (393)
T ss_dssp EE-ECCCSHHHHHHHH-TTTCSEEEESCCS
T ss_pred EE-CCcCCHHHHHHHH-HcCCCEEEECCCc
Confidence 99 8999999999999 6999999999864
No 163
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=98.61 E-value=4.3e-07 Score=81.84 Aligned_cols=144 Identities=16% Similarity=0.165 Sum_probs=95.6
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccc------------cccccccCChHHHHHHHHHHhhcc-cCcEEEEe
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSG------------GMGAALLSKPELIHDILTMLKRNL-DVPVTCKI 150 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~------------~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~ 150 (326)
.+.+...+.++.+.+ |+|.|||+. |...-..+ ..| -+.+.+.++++++++.+ ++|+.+ +
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~--P~sdP~adgp~i~~a~~~al~~G----~~~~~~~~~v~~ir~~~~~~Pi~~-m 100 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGF--PFSDPVADGPTIQVAHEVALKNG----IRFEDVLELSETLRKEFPDIPFLL-M 100 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEC--CCSCCTTSCHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCTTSCEEE-E
T ss_pred CChHHHHHHHHHHHHcCCCEEEECC--CCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhhcCCCCEEE-E
Confidence 456788888888877 899999964 43210000 111 24566778999999888 899877 2
Q ss_pred cCCCChH---HHHHHHHHHHHcCCcEEEEeeccc----------------------CC----------------------
Q 020428 151 RLLKSSQ---DTVELARRIEKTGVSALAVHGRKV----------------------AD---------------------- 183 (326)
Q Consensus 151 r~g~~~~---~~~e~a~~l~~~G~d~i~vh~r~~----------------------~~---------------------- 183 (326)
..+++- ....+++.+.++|+|++++.+-.. ..
T Consensus 101 -~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~ 179 (262)
T 2ekc_A 101 -TYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSV 179 (262)
T ss_dssp -CCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESS
T ss_pred -ecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEec
Confidence 112211 125667777777777776532100 00
Q ss_pred -CCCC---cC----CHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 184 -RPRD---PA----KWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 184 -~~~~---~~----~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
..+| +. ..+.++++++.+++||+..|||.|++++.+ + ..|||+|++|+++...
T Consensus 180 ~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~vG~GI~t~e~~~~-~-~~gADgvIVGSai~~~ 240 (262)
T 2ekc_A 180 TGTTGAREKLPYERIKKKVEEYRELCDKPVVVGFGVSKKEHARE-I-GSFADGVVVGSALVKL 240 (262)
T ss_dssp CC---------CHHHHHHHHHHHHHCCSCEEEESSCCSHHHHHH-H-HTTSSEEEECHHHHHH
T ss_pred CCccCCCCCcCcccHHHHHHHHHhhcCCCEEEeCCCCCHHHHHH-H-HcCCCEEEECHHHHhh
Confidence 0001 11 136788899888999999999999999999 5 3689999999998865
No 164
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=98.61 E-value=1e-06 Score=83.49 Aligned_cols=135 Identities=13% Similarity=0.217 Sum_probs=108.8
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+-..+...+++.+.+.++... +||..+.+..|+. +++.-.+.++++|+++ ++++.+....+
T Consensus 137 ~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~~ 201 (377)
T 3my9_A 137 PLSFSIADPDFDADLERMRAMVPAGHTVFKMKTGVK---------------PHAEELRILETMRGEFGERIDLRLDFNQA 201 (377)
T ss_dssp EBCEEECCSSHHHHHHHHHHHTTTTCCEEEEECSSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTTC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEccCCC---------------cHHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 4445565567877766665544 4999999988752 3455667888998887 67899999889
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
|+.++++++++.+++.|+++|. + +..+.+++..+++++.+++||.+.+.+.+.+++.++++...+|.|++--
T Consensus 202 ~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~ 273 (377)
T 3my9_A 202 LTPFGAMKILRDVDAFRPTFIE-------Q-PVPRRHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKI 273 (377)
T ss_dssp CCTTTHHHHHHHHHTTCCSCEE-------C-CSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCH
T ss_pred cCHHHHHHHHHHHhhcCCCEEE-------C-CCCccCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecc
Confidence 9999999999999999999883 2 2345689999999999999999999999999999999777799998864
Q ss_pred c
Q 020428 234 G 234 (326)
Q Consensus 234 ~ 234 (326)
+
T Consensus 274 ~ 274 (377)
T 3my9_A 274 M 274 (377)
T ss_dssp H
T ss_pred c
Confidence 4
No 165
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=98.60 E-value=5.5e-07 Score=81.50 Aligned_cols=150 Identities=11% Similarity=0.075 Sum_probs=96.9
Q ss_pred EEEEECC--CCHHHHHHHHHHhhcCCCEEEEccCCCccccc------------cccccccccCChHHHHHHHHHHhhccc
Q 020428 78 VVFQMGT--SDAVRALTAAKMVCKDVAAIDINMGCPKSFSV------------SGGMGAALLSKPELIHDILTMLKRNLD 143 (326)
Q Consensus 78 ~~vQl~g--~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~------------~~~~G~~l~~~p~~~~~iv~~v~~~~~ 143 (326)
++.=|.. .+.+...+.++.+.+++|.|||+. |...-. .-..| -+.+.+.++++++++.++
T Consensus 18 li~~i~~GdP~~~~~~~~~~~l~~~aD~IElG~--PfsdP~adGp~Iq~a~~~Al~~G----~~~~~~~~~v~~ir~~~~ 91 (271)
T 1ujp_A 18 LIPYLTAGFPSREGFLQAVEEVLPYADLLEIGL--PYSDPLGDGPVIQRASELALRKG----MSVQGALELVREVRALTE 91 (271)
T ss_dssp EEEEEETTSSCHHHHHHHHHHHGGGCSSEEEEC--CCCC----CHHHHHHHHHHHHTT----CCHHHHHHHHHHHHHHCC
T ss_pred EEEEecCCCCChHHHHHHHHHHHhcCCEEEECC--CCCCcccccHHHHHHHHHHHHcC----CCHHHHHHHHHHHHhcCC
Confidence 4444433 345677777777766699999954 432100 00111 245667789999998888
Q ss_pred CcEEEEecCCCCh---HHHHHHHHHHHHcCCcEEEEeec-------------------------ccC-------------
Q 020428 144 VPVTCKIRLLKSS---QDTVELARRIEKTGVSALAVHGR-------------------------KVA------------- 182 (326)
Q Consensus 144 ~pv~vK~r~g~~~---~~~~e~a~~l~~~G~d~i~vh~r-------------------------~~~------------- 182 (326)
+|+.+ + ..+++ -....+++.+.++|+|++++-+- +..
T Consensus 92 ~Pii~-m-~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~~~~gl~~i~liap~s~~eri~~ia~~~~g 169 (271)
T 1ujp_A 92 KPLFL-M-TYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATG 169 (271)
T ss_dssp SCEEE-E-CCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHHHHHTCEEECEECTTCCHHHHHHHHTTCCS
T ss_pred CCEEE-E-ecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHHcCCceEEEeCCCCCHHHHHHHHHhCCC
Confidence 99887 2 11221 12456677777777776663111 000
Q ss_pred -------CCCCC------cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 183 -------DRPRD------PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 183 -------~~~~~------~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
..++| ....++++++++.+++||++.|||.|++++.++ .|||+|+||+++...
T Consensus 170 fiy~vs~~G~TG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI~t~e~a~~~---~~ADgVIVGSAi~~~ 235 (271)
T 1ujp_A 170 FVYAVSVTGVTGMRERLPEEVKDLVRRIKARTALPVAVGFGVSGKATAAQA---AVADGVVVGSALVRA 235 (271)
T ss_dssp CEEEECC------------CCHHHHHHHHTTCCSCEEEESCCCSHHHHHHH---TTSSEEEECHHHHHH
T ss_pred CEEEEecCcccCCCCCCCccHHHHHHHHHhhcCCCEEEEcCCCCHHHHHHh---cCCCEEEEChHHhcc
Confidence 00111 223678999999889999999999999999996 689999999998864
No 166
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=98.59 E-value=1e-06 Score=77.26 Aligned_cols=133 Identities=19% Similarity=0.200 Sum_probs=95.7
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C-CChHHHHHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L-KSSQDTVELARR 165 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g-~~~~~~~e~a~~ 165 (326)
...++-+.++.|+|.||+.+ ..|...-.+.+.+.+-+.++++.++-+ .+|+=+ + .++++....++.
T Consensus 73 k~~e~~~Ai~~GAdevd~vi----------nig~~~~g~~~~v~~ei~~v~~a~~~~-~lkvIlet~~l~~e~i~~a~~i 141 (220)
T 1ub3_A 73 KALEAALACARGADEVDMVL----------HLGRAKAGDLDYLEAEVRAVREAVPQA-VLKVILETGYFSPEEIARLAEA 141 (220)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHSTTS-EEEEECCGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecc----------cchhhhCCCHHHHHHHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHH
Confidence 34455555556999999865 355555567888888888888887433 445322 2 456778888999
Q ss_pred HHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh--cCCcEEEeCCCCCHHHHHHHHHhcCCc--EEEeccchhc
Q 020428 166 IEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA--LSIPVIANGDVFEYDDFQRIKTAAGAS--SVMAARGALW 237 (326)
Q Consensus 166 l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~--~~iPVi~nGgI~s~~d~~~~l~~~Gad--~VmiGr~~l~ 237 (326)
..++|+|+|-.. .+...+.+..+.++.+++. .++||-++|||+|.+++.+++ +.||+ |+..|+.++.
T Consensus 142 a~eaGADfVKTs----TGf~~~gat~~dv~~m~~~vg~~v~VkaaGGirt~~~al~~i-~aGa~RiG~S~g~~I~~ 212 (220)
T 1ub3_A 142 AIRGGADFLKTS----TGFGPRGASLEDVALLVRVAQGRAQVKAAGGIRDRETALRML-KAGASRLGTSSGVALVA 212 (220)
T ss_dssp HHHHTCSEEECC----CSSSSCCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHH-HTTCSEEEETTHHHHHC
T ss_pred HHHhCCCEEEeC----CCCCCCCCCHHHHHHHHHhhCCCCeEEEECCCCCHHHHHHHH-HCCCcccchhHHHHHHH
Confidence 999999999543 2222345566666666653 479999999999999999999 59999 8877777553
No 167
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=98.58 E-value=4e-07 Score=79.73 Aligned_cols=77 Identities=27% Similarity=0.311 Sum_probs=59.5
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCC--CcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPR--DPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~--~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+.+..+.+.|+|+|.+......+... .+.+|+.++++++.+++||++.||| |++++.+++ ..|+++|++|++++.+
T Consensus 121 ~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~-~~Ga~gv~vgs~i~~~ 198 (221)
T 1yad_A 121 EEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVK-QAGADGIAVMSGIFSS 198 (221)
T ss_dssp HHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHH-HTTCSEEEESHHHHTS
T ss_pred HHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHH-HcCCCEEEEhHHhhCC
Confidence 33667778999999986542211111 2567999999998889999999999 999999999 5999999999998875
Q ss_pred c
Q 020428 239 A 239 (326)
Q Consensus 239 P 239 (326)
+
T Consensus 199 ~ 199 (221)
T 1yad_A 199 A 199 (221)
T ss_dssp S
T ss_pred C
Confidence 4
No 168
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=98.58 E-value=6.1e-07 Score=84.69 Aligned_cols=128 Identities=9% Similarity=0.099 Sum_probs=102.9
Q ss_pred cEEEEECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+...++. .+++++.+.|+.+.+ ||+.|.++.| |+...++++++|+++ ++++.+...-
T Consensus 131 ~~~~~~g~~~~~~~~~~~a~~~~~~Gf~~vKik~~------------------~~~~~e~v~avr~~~g~~~~l~vDan~ 192 (368)
T 1sjd_A 131 PCGVSVGIMDTIPQLLDVVGGYLDEGYVRIKLKIE------------------PGWDVEPVRAVRERFGDDVLLQVDANT 192 (368)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECB------------------TTBSHHHHHHHHHHHCTTSEEEEECTT
T ss_pred cceEEeeCCCCHHHHHHHHHHHHHhCccEEEEecC------------------chhHHHHHHHHHHhcCCCceEEEeccC
Confidence 34445543 478989888887665 9999999863 234457788888876 5778887777
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+|+.++ +++++.+++.|+++|- +. ..+.+++..+++++.+++||++.+.+.++++++++++...+|.|++
T Consensus 193 ~~~~~~-~~~~~~l~~~~i~~iE-------~P-~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~i 262 (368)
T 1sjd_A 193 AYTLGD-APQLARLDPFGLLLIE-------QP-LEEEDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNI 262 (368)
T ss_dssp CCCGGG-HHHHHTTGGGCCSEEE-------CC-SCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEE
T ss_pred CCCHHH-HHHHHHHHhcCCCeEe-------CC-CChhhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEe
Confidence 899989 9999999999999873 22 2456899999999999999999999999999999997666899988
No 169
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=98.56 E-value=1.7e-06 Score=78.18 Aligned_cols=137 Identities=11% Similarity=0.101 Sum_probs=102.9
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
+.|+..+=|..++.+..++ ...|+|+|=|... .+ +++.+.++++..++. +..+.+-+.
T Consensus 120 ~lPVl~Kdfi~d~~qi~ea---~~~GAD~VlLi~a--------------~L-~~~~l~~l~~~a~~l-Gl~~lvevh--- 177 (272)
T 3tsm_A 120 SLPALRKDFLFDPYQVYEA---RSWGADCILIIMA--------------SV-DDDLAKELEDTAFAL-GMDALIEVH--- 177 (272)
T ss_dssp SSCEEEESCCCSTHHHHHH---HHTTCSEEEEETT--------------TS-CHHHHHHHHHHHHHT-TCEEEEEEC---
T ss_pred CCCEEECCccCCHHHHHHH---HHcCCCEEEEccc--------------cc-CHHHHHHHHHHHHHc-CCeEEEEeC---
Confidence 4577776666777754443 2348999888653 12 456788888887764 777666663
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
..+.++.+.+.|++.|-+.+|.-.. -..|++...++.+.+ ++|+|+-|||.|++|+.++. ..|+|+|.||
T Consensus 178 ----~~eEl~~A~~~ga~iIGinnr~l~t---~~~dl~~~~~L~~~ip~~~~vIaesGI~t~edv~~l~-~~Ga~gvLVG 249 (272)
T 3tsm_A 178 ----DEAEMERALKLSSRLLGVNNRNLRS---FEVNLAVSERLAKMAPSDRLLVGESGIFTHEDCLRLE-KSGIGTFLIG 249 (272)
T ss_dssp ----SHHHHHHHTTSCCSEEEEECBCTTT---CCBCTHHHHHHHHHSCTTSEEEEESSCCSHHHHHHHH-TTTCCEEEEC
T ss_pred ----CHHHHHHHHhcCCCEEEECCCCCcc---CCCChHHHHHHHHhCCCCCcEEEECCCCCHHHHHHHH-HcCCCEEEEc
Confidence 2344566778999999999886442 245788888888877 69999999999999999999 6999999999
Q ss_pred cchhcCccc
Q 020428 233 RGALWNASI 241 (326)
Q Consensus 233 r~~l~~P~l 241 (326)
++++..++.
T Consensus 250 ~almr~~d~ 258 (272)
T 3tsm_A 250 ESLMRQHDV 258 (272)
T ss_dssp HHHHTSSCH
T ss_pred HHHcCCcCH
Confidence 999987654
No 170
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.56 E-value=7.1e-07 Score=87.77 Aligned_cols=102 Identities=20% Similarity=0.158 Sum_probs=75.5
Q ss_pred HHHHHHHHHHhhcc-c-CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCC-------CCCCcCCHHHHHHHHH
Q 020428 129 ELIHDILTMLKRNL-D-VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVAD-------RPRDPAKWGEIADIVA 199 (326)
Q Consensus 129 ~~~~~iv~~v~~~~-~-~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~-------~~~~~~~~~~i~~i~~ 199 (326)
..+.+.++.+++.. + .||.++.- .+.+-++.+.++|+|.+.+ |..... ...+.+....+.++.+
T Consensus 268 ~~~~~~i~~lk~~~~~~~~Vi~G~V------~t~~~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~ 340 (503)
T 1me8_A 268 EWQKITIGWIREKYGDKVKVGAGNI------VDGEGFRYLADAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVA 340 (503)
T ss_dssp HHHHHHHHHHHHHHGGGSCEEEEEE------CSHHHHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHH
T ss_pred cchhhHHHHHHHhCCCCceEeeccc------cCHHHHHHHHHhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHH
Confidence 33556667777776 5 88887664 2345678888999999998 553321 1123456677777665
Q ss_pred hc---------CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 200 AL---------SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 200 ~~---------~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
.+ ++|||+.|||.++.|+.+++ ..|||+||+||.++..
T Consensus 341 ~~~~~~~~~~~~ipvia~GGi~~~~di~kAl-alGA~~V~iG~~~~~~ 387 (503)
T 1me8_A 341 ERNKYFEETGIYIPVCSDGGIVYDYHMTLAL-AMGADFIMLGRYFARF 387 (503)
T ss_dssp HHHHHHHHHSEECCEEEESCCCSHHHHHHHH-HTTCSEEEESHHHHTB
T ss_pred HHHHHhhhcCCCceEEEeCCCCCHHHHHHHH-HcCCCEEEECchhhcc
Confidence 43 69999999999999999999 6999999999999853
No 171
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=98.56 E-value=9.9e-07 Score=84.90 Aligned_cols=150 Identities=11% Similarity=0.097 Sum_probs=114.0
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCcccccccccccc------------------c--cCChHHHHHHH
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAA------------------L--LSKPELIHDIL 135 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~------------------l--~~~p~~~~~iv 135 (326)
|+-.-+.+.+++++.+.++...+ ||..+-+..|-|.... .+|.. . -.+.+...+++
T Consensus 140 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~---~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v 216 (424)
T 3v3w_A 140 LSYTHANGKDLDSTLEAVRKAKDKGYKAIRVQCGIPGIAK---TYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVF 216 (424)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCSC---CTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCccccc---cccccccccccccccccccccccccchhHHHHHHHHH
Confidence 44444566789998887776654 9999999888642100 01100 0 01246678889
Q ss_pred HHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCC
Q 020428 136 TMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFE 213 (326)
Q Consensus 136 ~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s 213 (326)
+++|+++ ++++.+....+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.+
T Consensus 217 ~avR~avG~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~ 288 (424)
T 3v3w_A 217 AAVRKEFGPDIHLLHDVHHRLTPIEAARLGKALEPYHLFWME-------DA-VPAENQESFKLIRQHTTTPLAVGEVFNS 288 (424)
T ss_dssp HHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCCSSTTHHHHHHHHCCSCEEECTTCCS
T ss_pred HHHHHHcCCCCcEEEeCCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChHhHHHHHHHHhhCCCCEEEccCcCC
Confidence 9999987 678999988899999999999999999999984 22 2345788899999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEeccchhc
Q 020428 214 YDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 214 ~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
++++.++++...+|.|++--+-.+
T Consensus 289 ~~~~~~~i~~ga~d~v~~k~~~~G 312 (424)
T 3v3w_A 289 IHDCRELIQNQWIDYIRTTIVHAG 312 (424)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTT
T ss_pred HHHHHHHHHcCCCCeEeecchhcC
Confidence 999999997666899988654443
No 172
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=98.56 E-value=1.1e-06 Score=82.93 Aligned_cols=135 Identities=10% Similarity=0.124 Sum_probs=108.1
Q ss_pred cEEEEECCCCH-HHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMGTSDA-VRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~-~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+..-+...++ +.+.++++.+. .|+..+.+..|+. +++.-.+.++++|+++ ++++.+....
T Consensus 133 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~ 197 (370)
T 1chr_A 133 PIAWTLASGDTKRDLDSAVEMIERRRHNRFKVKLGFR---------------SPQDDLIHMEALSNSLGSKAYLRVDVNQ 197 (370)
T ss_dssp EBEEEECSSSHHHHHHHHHHHHHTTCCCEEEEECSSS---------------CSHHHHHHHHHHHHHSSTTCCEEEECTT
T ss_pred eEEEEecCCCcHHHHHHHHHHHHHCCCCEEEEecCCC---------------CHHHHHHHHHHHHHhcCCCCEEEEECCC
Confidence 34344544444 45677777777 4999999988753 3556677889999987 4799999998
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.+++.++++.+++.|+++|. | +..+.+++..+++++.+++||++.+.+.+.+++.++++...+|.|++-
T Consensus 198 ~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k 269 (370)
T 1chr_A 198 AWDEQVASVYIPELEALGVELIE-------Q-PVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLK 269 (370)
T ss_dssp CCCTTHHHHHTHHHHTTTEEEEE-------C-CSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEEC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEEC
Confidence 99999999999999999998874 2 234568999999999999999999999999999999976679999886
Q ss_pred cc
Q 020428 233 RG 234 (326)
Q Consensus 233 r~ 234 (326)
-+
T Consensus 270 ~~ 271 (370)
T 1chr_A 270 LC 271 (370)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 173
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=98.54 E-value=8e-07 Score=85.58 Aligned_cols=150 Identities=12% Similarity=0.052 Sum_probs=112.4
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCcccccccccccc---c--------------c---CChHHHHHHH
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAA---L--------------L---SKPELIHDIL 135 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~---l--------------~---~~p~~~~~iv 135 (326)
|+-.-+.+.+++++.+.++...+ ||..+-+..|.|... ..+|.. . . .+.+...+++
T Consensus 141 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~---~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v 217 (425)
T 3vcn_A 141 TVYGHANGETIEDTIAEAVKYKAMGYKAIRLQTGVPGLA---STYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLF 217 (425)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEECCTTCS---CCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHH
T ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeecCcccc---ccccccccccccCcccccccccccccchhHHHHHHHHH
Confidence 44444566789998887776654 999999988864210 001100 0 0 0134456788
Q ss_pred HHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCC
Q 020428 136 TMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFE 213 (326)
Q Consensus 136 ~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s 213 (326)
+++|+++ ++++.+....+|+.++++++++.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.|
T Consensus 218 ~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~ 289 (425)
T 3vcn_A 218 ERAREVLGWDVHLLHDVHHRLTPIEAARLGKDLEPYRLFWLE-------DS-VPAENQAGFRLIRQHTTTPLAVGEIFAH 289 (425)
T ss_dssp HHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEEE-------CC-SCCSSTTHHHHHHHHCCSCEEECTTCCS
T ss_pred HHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEEE-------CC-CChhhHHHHHHHHhcCCCCEEeCCCcCC
Confidence 8999887 678999888899999999999999999999984 22 2345788899999999999999999999
Q ss_pred HHHHHHHHHhcCCcEEEeccchhc
Q 020428 214 YDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 214 ~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
++++.++++...+|.|++--+-.+
T Consensus 290 ~~~~~~~i~~~a~d~v~~k~~~~G 313 (425)
T 3vcn_A 290 VWDAKQLIEEQLIDYLRATVLHAG 313 (425)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTT
T ss_pred HHHHHHHHHcCCCCeEecChhhcC
Confidence 999999997666899988654433
No 174
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=98.54 E-value=2.7e-07 Score=83.02 Aligned_cols=78 Identities=13% Similarity=0.048 Sum_probs=67.2
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
...+...+..|...+-+.+.. .+.+.+.++++++.+ ++||++.|||+|.+++++++ ..|||+|++|++++.
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~------~~v~~e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll-~aGAD~VVVGSAav~ 261 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRN------EHVPPEVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYL-DSGADYVGFAGALEQ 261 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSS------SCCCHHHHHHHHHHSCTTCEEEEESSCCSHHHHHHHH-HTTCSEEEESGGGSS
T ss_pred HHHHHHHHHcCCCEEEEcCCC------CcCCHHHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHH-HcCCCEEEECchhhc
Confidence 566777778888888877532 466789999999999 89999999999999999999 689999999999999
Q ss_pred C--cccccc
Q 020428 238 N--ASIFSS 244 (326)
Q Consensus 238 ~--P~lf~~ 244 (326)
| |.++++
T Consensus 262 d~~Pelv~e 270 (286)
T 3vk5_A 262 PDWRSALAE 270 (286)
T ss_dssp TTHHHHHHH
T ss_pred CCCHHHHHH
Confidence 9 777665
No 175
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=98.54 E-value=1.6e-07 Score=81.75 Aligned_cols=143 Identities=15% Similarity=0.187 Sum_probs=98.6
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCcccc---------ccccccccccCChHHHH-------------
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFS---------VSGGMGAALLSKPELIH------------- 132 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~---------~~~~~G~~l~~~p~~~~------------- 132 (326)
.|++.-+-+.+++++.+.++.+.+ |++.|++++-+|.... ...++|. ++ +.+.+.
T Consensus 13 ~~ii~vi~~~~~~~~~~~~~~l~~gGv~~iel~~k~~~~~~~i~~~~~~~~~~gag~-vl-~~d~~~~A~~~GAd~v~~~ 90 (207)
T 2yw3_A 13 SRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRKSGLLLGAGT-VR-SPKEAEAALEAGAAFLVSP 90 (207)
T ss_dssp HCEEEEECCCSCCCHHHHHHHHHHTTCCEEEEECSSTHHHHHHHHHTTSSCEEEEES-CC-SHHHHHHHHHHTCSEEEES
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHhCCCCEEEeCe-Ee-eHHHHHHHHHcCCCEEEcC
Confidence 378888888888888888887766 8999999988875421 1123343 22 333332
Q ss_pred ----HHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc-CCcEE
Q 020428 133 ----DILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL-SIPVI 206 (326)
Q Consensus 133 ----~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~-~iPVi 206 (326)
++++..+. .++|+...+. +.+.+..+.+.|+|+|.++.- ... -.+.++.++..+ ++|++
T Consensus 91 ~~d~~v~~~~~~-~g~~~i~G~~-------t~~e~~~A~~~Gad~v~~fpa-------~~~gG~~~lk~l~~~~~~ipvv 155 (207)
T 2yw3_A 91 GLLEEVAALAQA-RGVPYLPGVL-------TPTEVERALALGLSALKFFPA-------EPFQGVRVLRAYAEVFPEVRFL 155 (207)
T ss_dssp SCCHHHHHHHHH-HTCCEEEEEC-------SHHHHHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHHHCTTCEEE
T ss_pred CCCHHHHHHHHH-hCCCEEecCC-------CHHHHHHHHHCCCCEEEEecC-------ccccCHHHHHHHHhhCCCCcEE
Confidence 23333332 3555554431 233456667789999999651 111 257788888887 89999
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+.|||+ .+++.+++ ..|+++|.+|++++.
T Consensus 156 aiGGI~-~~n~~~~l-~aGa~~vavgSai~~ 184 (207)
T 2yw3_A 156 PTGGIK-EEHLPHYA-ALPNLLAVGGSWLLQ 184 (207)
T ss_dssp EBSSCC-GGGHHHHH-TCSSBSCEEESGGGS
T ss_pred EeCCCC-HHHHHHHH-hCCCcEEEEehhhhC
Confidence 999997 79999999 699999999999765
No 176
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=98.54 E-value=3.1e-06 Score=80.37 Aligned_cols=136 Identities=12% Similarity=0.159 Sum_probs=109.0
Q ss_pred cEEEEECCCCHHHHHHHHHHh-hcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMV-CKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLK 154 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~-~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~ 154 (326)
|+...++..+++.+.+.++.. .+||..+.+..|+. +++.-.+.++++|+++ ++++.+....+|
T Consensus 139 ~~~~t~~~~~~~~~~~~a~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~a~~~~~l~vDan~~~ 203 (385)
T 3i6e_A 139 PLSCSIANPDFDADIALMERLRADGVGLIKLKTGFR---------------DHAFDIMRLELIARDFPEFRVRVDYNQGL 203 (385)
T ss_dssp EBEEEECCSSHHHHHHHHHHHHHHTCCEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCC
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEecCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 455566666787776655554 45999999988742 3455567788888876 678999998899
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
+.++++++++.+++.|+.+|- + +..+.+++..+++++.+++||.+...+.+.+++.++++...+|.|++--+
T Consensus 204 ~~~~A~~~~~~L~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~ 275 (385)
T 3i6e_A 204 EIDEAVPRVLDVAQFQPDFIE-------Q-PVRAHHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIM 275 (385)
T ss_dssp CGGGHHHHHHHHHTTCCSCEE-------C-CSCTTCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHH
T ss_pred CHHHHHHHHHHHHhcCCCEEE-------C-CCCcccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeccc
Confidence 999999999999999999883 2 23456899999999999999999999999999999997777899988644
Q ss_pred h
Q 020428 235 A 235 (326)
Q Consensus 235 ~ 235 (326)
-
T Consensus 276 ~ 276 (385)
T 3i6e_A 276 K 276 (385)
T ss_dssp H
T ss_pred c
Confidence 3
No 177
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=98.53 E-value=1.8e-06 Score=82.22 Aligned_cols=134 Identities=14% Similarity=0.202 Sum_probs=108.1
Q ss_pred cEEEEECC---CCHHHHHHHHHH-hhc---CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEE
Q 020428 77 HVVFQMGT---SDAVRALTAAKM-VCK---DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVT 147 (326)
Q Consensus 77 p~~vQl~g---~~~~~~~~aa~~-~~~---~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~ 147 (326)
|+-..+++ .+++++.+.++. +.+ ||..+-+..|.+ +++.-.+.++++|+++ ++++.
T Consensus 159 ~~y~s~g~~~~~~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~ 223 (390)
T 3ugv_A 159 KAYNSNGLWLKSPAEVAAEAVELKAEGQGTGFKGLKLRMGRD---------------DPAVDIETAEAVWDAVGRDTALM 223 (390)
T ss_dssp EEEECSCCCSSCHHHHHHHHHHHHHTTCTTCCSEEEEECCCS---------------SHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEEecccccCCCHHHHHHHHHHHHHhhhCCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCEEE
Confidence 44444455 678887766654 457 899999988754 3566677889999887 67899
Q ss_pred EEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCc
Q 020428 148 CKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 148 vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad 227 (326)
+....+|+.++++++++.+++.|+++|- | +..+.+++..+++++.+++||.+...+.+..++.++++...+|
T Consensus 224 vDaN~~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d 295 (390)
T 3ugv_A 224 VDFNQGLDMAEAMHRTRQIDDLGLEWIE-------E-PVVYDNFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACD 295 (390)
T ss_dssp EECTTCCCHHHHHHHHHHHTTSCCSEEE-------C-CSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCS
T ss_pred EECCCCCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcccHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCC
Confidence 9988899999999999999999999883 2 2345589999999999999999999999999999999766689
Q ss_pred EEEecc
Q 020428 228 SVMAAR 233 (326)
Q Consensus 228 ~VmiGr 233 (326)
.|++--
T Consensus 296 ~v~ik~ 301 (390)
T 3ugv_A 296 LVMPDF 301 (390)
T ss_dssp EECCBH
T ss_pred EEEeCc
Confidence 887653
No 178
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=98.53 E-value=2e-06 Score=81.39 Aligned_cols=124 Identities=13% Similarity=0.129 Sum_probs=103.2
Q ss_pred CHHHHHHHHH-Hhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 86 DAVRALTAAK-MVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 86 ~~~~~~~aa~-~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
+++++.+.++ .+.. |+..+.+..|+| +++.-.+.++++|+++ +.++.+....+|+.+++++
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~---------------~~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~ 215 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHD---------------DPNIDIARLTAVRERVDSAVRIAIDGNGKWDLPTCQR 215 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCS---------------SHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCC---------------CHHHHHHHHHHHHHHcCCCCcEEeeCCCCCCHHHHHH
Confidence 7887776665 4557 999999998875 2456678899999987 6789999888999999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++.+++.|+++|- +. ..+.+++..+++++.+++||++.+.+.|.+++.++++...+|.|++-
T Consensus 216 ~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k 278 (372)
T 3tj4_A 216 FCAAAKDLDIYWFE-------EP-LWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPD 278 (372)
T ss_dssp HHHHTTTSCEEEEE-------SC-SCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC
T ss_pred HHHHHhhcCCCEEE-------CC-CCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeC
Confidence 99999999988873 22 24558999999999999999999999999999999976668988764
No 179
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=98.52 E-value=3.2e-06 Score=80.23 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=108.2
Q ss_pred cEEEEECCCCHHHHHHHHHH-hhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVRALTAAKM-VCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~-~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+-..++..+++.+.+.++. +.+ ||..+-+..|++ +++.-.+.++++|+++ ++++.+....
T Consensus 158 ~~y~s~g~~~~e~~~~~a~~~~~~~G~~~~KlKvG~~---------------~~~~d~~~v~avR~a~G~~~~l~vDaN~ 222 (383)
T 3toy_A 158 PAYDSYGVLDARDDERTLRTACDEHGFRAIKSKGGHG---------------DLATDEAMIKGLRALLGPDIALMLDFNQ 222 (383)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHTSCCCEEEEECCSS---------------CHHHHHHHHHHHHHHHCTTSEEEEECTT
T ss_pred EEeEecCCCCHHHHHHHHHHHHHccCCcEEEEecCCC---------------CHHHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence 44445545688887766665 456 999999988753 3566677889999887 6789999888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+.++++++++.+++.|+++|- + +..+.+++..+++++.+++||++...+.+.+++.++++...+|.|++-
T Consensus 223 ~~~~~~A~~~~~~l~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik 294 (383)
T 3toy_A 223 SLDPAEATRRIARLADYDLTWIE-------E-PVPQENLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPD 294 (383)
T ss_dssp CSCHHHHHHHHHHHGGGCCSEEE-------C-CSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCC
T ss_pred CCCHHHHHHHHHHHHhhCCCEEE-------C-CCCcchHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 99999999999999999999983 2 234558999999999999999999999999999999976668988764
No 180
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=98.51 E-value=2.5e-06 Score=80.53 Aligned_cols=132 Identities=15% Similarity=0.192 Sum_probs=106.6
Q ss_pred cEEEEECCCCHHHHHHHHHH-hhc-CCCEEEEccCCCccccccccccccccCChH-HHHHHHHHHhhcc--cCcEEEEec
Q 020428 77 HVVFQMGTSDAVRALTAAKM-VCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPE-LIHDILTMLKRNL--DVPVTCKIR 151 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~-~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~-~~~~iv~~v~~~~--~~pv~vK~r 151 (326)
|+...++..+++.+.+.++. +.+ ||..+-+..|.. +. .-.+.++++|+++ +.++.+...
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~G~~~~K~K~g~~----------------~~~~d~~~v~avR~a~g~~~~l~vDan 193 (367)
T 3dg3_A 130 RVSHMLGFDDPVKMVAEAERIRETYGINTFKVKVGRR----------------PVQLDTAVVRALRERFGDAIELYVDGN 193 (367)
T ss_dssp EEEEEEESSCHHHHHHHHHHHHHHHCCCEEEEECCCS----------------STHHHHHHHHHHHHHHGGGSEEEEECT
T ss_pred EEEEEecCCCHHHHHHHHHHHHHhcCccEEEEeeCCC----------------hhhhHHHHHHHHHHHhCCCCEEEEECC
Confidence 45556666788888766655 456 999999987741 22 4456788888877 678889888
Q ss_pred CCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 152 LLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 152 ~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
-+|+.+++.++++.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.+.+++.++++...+|.|++
T Consensus 194 ~~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 265 (367)
T 3dg3_A 194 RGWSAAESLRAMREMADLDLLFAE-------E-LCPADDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISI 265 (367)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSCEE-------S-CSCTTSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEE-------C-CCCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEe
Confidence 899999999999999999999884 2 23455899999999999999999999999999999997666899987
Q ss_pred c
Q 020428 232 A 232 (326)
Q Consensus 232 G 232 (326)
=
T Consensus 266 k 266 (367)
T 3dg3_A 266 K 266 (367)
T ss_dssp C
T ss_pred e
Confidence 4
No 181
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=98.51 E-value=3e-06 Score=80.54 Aligned_cols=139 Identities=11% Similarity=0.081 Sum_probs=113.3
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEec
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIR 151 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r 151 (326)
..|+-..++..+++++.+.++.+. .||..+.+..|||.. ..+++.-.+.++++|+++ ++++.+...
T Consensus 134 ~v~~y~s~~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~-----------~~~~~~d~~~v~avR~a~G~~~~L~vDaN 202 (386)
T 3fv9_G 134 PVPVISSIGGDTPEAMRAKVARHRAQGFKGHSIKIGASEA-----------EGGPALDAERITACLADRQPGEWYLADAN 202 (386)
T ss_dssp CBCEEEEECSCCHHHHHHHHHHHHHTTCCEEEEECCCCTT-----------TTHHHHHHHHHHHHTTTCCTTCEEEEECT
T ss_pred ceeeeEecCCCCHHHHHHHHHHHHHCCCCEEEEeccCCCC-----------CCCHHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 457777788889999888877665 499999999998732 124677778899999987 578899998
Q ss_pred CCCChHHHHHHHHHH-HHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEE
Q 020428 152 LLKSSQDTVELARRI-EKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 152 ~g~~~~~~~e~a~~l-~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vm 230 (326)
.+|+.+++.++++.+ ++.++ +|- +.. .+++..+++++.+++||.+...+.+..++.++++...+|.|+
T Consensus 203 ~~~~~~~A~~~~~~l~~~~~i-~iE-------eP~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ 271 (386)
T 3fv9_G 203 NGLTVEHALRMLSLLPPGLDI-VLE-------APC---ASWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVG 271 (386)
T ss_dssp TCCCHHHHHHHHHHSCSSCCC-EEE-------CCC---SSHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCCHHHHHHHHHHhhccCCc-EEe-------cCC---CCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEE
Confidence 899999999999999 77777 652 222 289999999999999999999999999999999766789998
Q ss_pred eccch
Q 020428 231 AARGA 235 (326)
Q Consensus 231 iGr~~ 235 (326)
+--+-
T Consensus 272 ~k~~~ 276 (386)
T 3fv9_G 272 LKVSK 276 (386)
T ss_dssp EEHHH
T ss_pred ECccc
Confidence 86443
No 182
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=98.50 E-value=2e-06 Score=83.20 Aligned_cols=154 Identities=12% Similarity=0.117 Sum_probs=114.3
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccc-----------ccccc------------ccccc--cCChHH
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSF-----------SVSGG------------MGAAL--LSKPEL 130 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~-----------~~~~~------------~G~~l--~~~p~~ 130 (326)
|+-..+.+.+++++.+.++.+. +||..+-+.+|-.... +..+. -|..+ ..+.+.
T Consensus 146 ~~y~~~~~~~~e~~~~~a~~~~~~Gf~~~K~KvG~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (440)
T 3t6c_A 146 ALYVHTDGADEVEVEDSARAKMEEGYQYIRCQMGMYGGAGTDDLRLIANRMVKAKNIQPKRSPRTKAPGIYFDPEAYAKS 225 (440)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHTTCSEEEECSSSSTTCCBCCHHHHSSCBCCCSSCCCCCCCSSCCSSEECCHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeeccCCccccccccccccccccccccccccccccccccccccchhhHHH
Confidence 4444567788999888777665 4999999988743210 00000 00000 011456
Q ss_pred HHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe
Q 020428 131 IHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN 208 (326)
Q Consensus 131 ~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n 208 (326)
..+.++++|+++ ++++.+....+|+.++++++++.+++.|+.+|- +. ..+.+++.++++++.+++||++.
T Consensus 226 d~~~v~avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~iPIa~d 297 (440)
T 3t6c_A 226 IPRLFDHLRNKLGFSVELLHDAHERITPINAIHMAKALEPYQLFFLE-------DP-VAPENTEWLKMLRQQSSTPIAMG 297 (440)
T ss_dssp HHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------CS-SCGGGGGGHHHHHHHCCSCEEEC
T ss_pred HHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHhhhcCCCEEE-------CC-CChhhHHHHHHHHhhcCCCEEeC
Confidence 678899999987 678999999899999999999999999999984 22 23557888999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+.+.+.+++.++++...+|.|++--+-.+.
T Consensus 298 E~~~~~~~~~~~i~~~a~d~v~~k~~~~GG 327 (440)
T 3t6c_A 298 ELFVNVNEWKPLIDNKLIDYIRCHISSIGG 327 (440)
T ss_dssp TTCCSHHHHHHHHHTTCCSEECCCGGGGTS
T ss_pred cccCCHHHHHHHHHcCCccceeechhhhCC
Confidence 999999999999976668999887554443
No 183
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=98.48 E-value=5.3e-06 Score=74.71 Aligned_cols=121 Identities=18% Similarity=0.192 Sum_probs=86.5
Q ss_pred HhhcCCCEEEEcc--CCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecC-CC------ChHHHHHHH
Q 020428 96 MVCKDVAAIDINM--GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRL-LK------SSQDTVELA 163 (326)
Q Consensus 96 ~~~~~~d~idlN~--gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~-g~------~~~~~~e~a 163 (326)
.+..|+++|++.. |. .+.+.+.+.+.++++.+ ++|+.+=..+ |. +++.....+
T Consensus 101 Ai~~Ga~~v~~~~nig~---------------~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~ 165 (263)
T 1w8s_A 101 AVSLGASAVGYTIYPGS---------------GFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAA 165 (263)
T ss_dssp HHHTTCSEEEEEECTTS---------------TTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHH
T ss_pred HHHCCCCEEEEEEecCC---------------cCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHH
Confidence 3445999998754 41 12334444444444433 7888776544 11 445555667
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCC-cEEEeCCCC--CHHHHHHHHH---hcCCcEEEeccchhc
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSI-PVIANGDVF--EYDDFQRIKT---AAGASSVMAARGALW 237 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~i-PVi~nGgI~--s~~d~~~~l~---~~Gad~VmiGr~~l~ 237 (326)
+...++|+|+|-+. + +.+.+.++++++.+++ ||++.|||. |.+++.++++ +.||+|+.+||+++.
T Consensus 166 ~~a~~~GAD~vkt~--~-------~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~ 236 (263)
T 1w8s_A 166 RIALELGADAMKIK--Y-------TGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQ 236 (263)
T ss_dssp HHHHHHTCSEEEEE--C-------CSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHT
T ss_pred HHHHHcCCCEEEEc--C-------CCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcC
Confidence 89999999999876 1 1267889999988887 999999999 9999888773 489999999999887
Q ss_pred Ccc
Q 020428 238 NAS 240 (326)
Q Consensus 238 ~P~ 240 (326)
.|.
T Consensus 237 ~~d 239 (263)
T 1w8s_A 237 RRD 239 (263)
T ss_dssp STT
T ss_pred CcC
Confidence 753
No 184
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=98.48 E-value=5.3e-06 Score=78.62 Aligned_cols=134 Identities=15% Similarity=0.209 Sum_probs=109.0
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g 153 (326)
|+-..++..+++++.+.++... .||..+.+..|. +++.-.+.++++|+++ ++++.+...-+
T Consensus 133 ~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g~----------------~~~~d~~~v~avR~a~g~~~~L~vDaN~~ 196 (379)
T 3r0u_A 133 VTDVSISCGNVAETIQNIQNGVEANFTAIKVKTGA----------------DFNRDIQLLKALDNEFSKNIKFRFDANQG 196 (379)
T ss_dssp EBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHCCTTSEEEEECTTC
T ss_pred EEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecCC----------------CHHHHHHHHHHHHHhcCCCCeEEEeCCCC
Confidence 4445666678988887776654 499999998762 3667778899999987 57899998889
Q ss_pred CChHHHHHHHHHHHH--cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 154 KSSQDTVELARRIEK--TGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~--~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
|+.++++++++.+++ .|+.+|- + +..+.+++..+++++.+++||.+...+.|..++.++++...+|.|++
T Consensus 197 w~~~~A~~~~~~l~~~~~~l~~iE-------e-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~ 268 (379)
T 3r0u_A 197 WNLAQTKQFIEEINKYSLNVEIIE-------Q-PVKYYDIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINI 268 (379)
T ss_dssp CCHHHHHHHHHHHHTSCCCEEEEE-------C-CSCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEE
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEE-------C-CCCcccHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEE
Confidence 999999999999999 7777763 2 23455899999999999999999999999999999996556899988
Q ss_pred ccc
Q 020428 232 ARG 234 (326)
Q Consensus 232 Gr~ 234 (326)
--+
T Consensus 269 k~~ 271 (379)
T 3r0u_A 269 KLA 271 (379)
T ss_dssp CHH
T ss_pred Ccc
Confidence 643
No 185
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=98.47 E-value=3.8e-06 Score=81.81 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=94.7
Q ss_pred CCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 84 TSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
|..++.+.++..++..|+|.|=|.... -..+.+.+.++.+++.. +++|.+--- .+.+-
T Consensus 277 gv~~d~~eR~~aLv~AGvD~iviD~ah---------------Ghs~~v~~~i~~ik~~~p~~~viaGNV------aT~e~ 335 (556)
T 4af0_A 277 GTRPGDKDRLKLLAEAGLDVVVLDSSQ---------------GNSVYQIEFIKWIKQTYPKIDVIAGNV------VTREQ 335 (556)
T ss_dssp CSSHHHHHHHHHHHHTTCCEEEECCSC---------------CCSHHHHHHHHHHHHHCTTSEEEEEEE------CSHHH
T ss_pred ccCccHHHHHHHHHhcCCcEEEEeccc---------------cccHHHHHHHHHHHhhCCcceEEeccc------cCHHH
Confidence 445677888888777799987775421 12356778889998876 677766432 34566
Q ss_pred HHHHHHcCCcEEEEe------ecccCCCCCCcCCHHHHHHHH---HhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 163 ARRIEKTGVSALAVH------GRKVADRPRDPAKWGEIADIV---AALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 163 a~~l~~~G~d~i~vh------~r~~~~~~~~~~~~~~i~~i~---~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
++.|.++|+|.|-|- .-|+.....+.+....+.+++ +..++|||+-|||.+.-|+.+++ ..|||.||+|+
T Consensus 336 a~~Li~aGAD~vkVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~~sGDi~KAl-aaGAd~VMlGs 414 (556)
T 4af0_A 336 AAQLIAAGADGLRIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIGNIGHIAKAL-ALGASAVMMGG 414 (556)
T ss_dssp HHHHHHHTCSEEEECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHH-HTTCSEEEEST
T ss_pred HHHHHHcCCCEEeecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcCcchHHHHHh-hcCCCEEEEch
Confidence 788889999999873 123333333445566665554 45689999999999999999999 69999999998
Q ss_pred chhc
Q 020428 234 GALW 237 (326)
Q Consensus 234 ~~l~ 237 (326)
-|-.
T Consensus 415 llAG 418 (556)
T 4af0_A 415 LLAG 418 (556)
T ss_dssp TTTT
T ss_pred hhcc
Confidence 6654
No 186
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=98.46 E-value=1.6e-06 Score=77.78 Aligned_cols=135 Identities=13% Similarity=0.106 Sum_probs=94.8
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
+.|+..+=|-.++.+..+ ...-|+|+|=|.. ..+. +.+.++++..+. .++.+.|-+.
T Consensus 106 ~lPvl~kdfI~d~~qi~~---a~~~GAD~VlL~~--------------~~l~--~~l~~l~~~a~~-lGl~~lvev~--- 162 (254)
T 1vc4_A 106 DLPLLRKDFVVDPFMLEE---ARAFGASAALLIV--------------ALLG--ELTGAYLEEARR-LGLEALVEVH--- 162 (254)
T ss_dssp CSCEEEESCCCSHHHHHH---HHHTTCSEEEEEH--------------HHHG--GGHHHHHHHHHH-HTCEEEEEEC---
T ss_pred CCCEEECCcCCCHHHHHH---HHHcCCCEEEECc--------------cchH--HHHHHHHHHHHH-CCCeEEEEEC---
Confidence 457766656677765433 2224899988753 2333 567777776554 3544444442
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCCHHHHHHHHHhcCCcEE
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-----SIPVIANGDVFEYDDFQRIKTAAGASSV 229 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~d~~~~l~~~Gad~V 229 (326)
+ ..| +..+.+.|++.|-++.|... .-..|++...++.+.+ ++|+|+.|||.|++|+.++. . |+|+|
T Consensus 163 ~---~~E-~~~a~~~gad~IGvn~~~l~---~~~~dl~~~~~L~~~i~~~~~~~~vIAegGI~s~~dv~~l~-~-Ga~gv 233 (254)
T 1vc4_A 163 T---ERE-LEIALEAGAEVLGINNRDLA---TLHINLETAPRLGRLARKRGFGGVLVAESGYSRKEELKALE-G-LFDAV 233 (254)
T ss_dssp S---HHH-HHHHHHHTCSEEEEESBCTT---TCCBCTTHHHHHHHHHHHTTCCSEEEEESCCCSHHHHHTTT-T-TCSEE
T ss_pred C---HHH-HHHHHHcCCCEEEEccccCc---CCCCCHHHHHHHHHhCccccCCCeEEEEcCCCCHHHHHHHH-c-CCCEE
Confidence 1 222 45677789999999988643 2355778888887766 79999999999999999999 6 99999
Q ss_pred EeccchhcCccc
Q 020428 230 MAARGALWNASI 241 (326)
Q Consensus 230 miGr~~l~~P~l 241 (326)
.||++++..++.
T Consensus 234 lVGsAl~~~~d~ 245 (254)
T 1vc4_A 234 LIGTSLMRAPDL 245 (254)
T ss_dssp EECHHHHTSSCH
T ss_pred EEeHHHcCCCCH
Confidence 999999987653
No 187
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=98.44 E-value=8.8e-07 Score=77.81 Aligned_cols=81 Identities=11% Similarity=0.066 Sum_probs=69.0
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 156 SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
.++....|...+-.|...|-+.+ +.. +.+.+.++++++.+ ++||++.|||+|++++++++ .|||+|++|++
T Consensus 139 ~e~~~~~a~~a~~~g~~~VYld~-sG~-----~~~~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~--~gAD~VVVGSa 210 (228)
T 3vzx_A 139 MDDIVAYARVSELLQLPIFYLEY-SGV-----LGDIEAVKKTKAVLETSTLFYGGGIKDAETAKQYA--EHADVIVVGNA 210 (228)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-TTS-----CCCHHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH--TTCSEEEECTH
T ss_pred HHHHHHHHHHHHHcCCCEEEecC-CCC-----cCCHHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH--hCCCEEEEChH
Confidence 46677777777888899998877 322 22799999999999 79999999999999999998 49999999999
Q ss_pred hhcCcccccc
Q 020428 235 ALWNASIFSS 244 (326)
Q Consensus 235 ~l~~P~lf~~ 244 (326)
+..||.++.+
T Consensus 211 ~v~~p~~~~~ 220 (228)
T 3vzx_A 211 VYEDFDRALK 220 (228)
T ss_dssp HHHCHHHHHH
T ss_pred HhcCHHHHHH
Confidence 9999988765
No 188
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=98.44 E-value=5.7e-06 Score=78.67 Aligned_cols=133 Identities=14% Similarity=0.199 Sum_probs=105.2
Q ss_pred CHHHHHH-HHHHh-hcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 86 DAVRALT-AAKMV-CKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 86 ~~~~~~~-aa~~~-~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
++++..+ +++.. ..||..+-+..|++.. ......|+...+.++++|+++ ++++.+....+|+.+++++
T Consensus 146 ~~~~~~~~~~~~~~~~Gf~~~K~KvG~~~~--------~d~~~~~~~~~~~v~avReavG~d~~l~vDaN~~~~~~~A~~ 217 (388)
T 3tcs_A 146 TPRDEAERLKRLRDTQGFTAFKVRAGAEVG--------RNRDEWPGRTEEIIPTMRRELGDDVDLLIDANSCYTPDRAIE 217 (388)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECSCTTC--------TTCCSSTTHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHH
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEccCCCcc--------cccccchhHHHHHHHHHHHHhCCCCeEEEeCCCCcCHHHHHH
Confidence 5655444 44443 3599999999987642 122234667778899999987 6789999998999999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
+++.+++.|+.+|- + +..+.+++..+++++.+++||.+...+.|..++.++++...+|.|++--+
T Consensus 218 ~~~~l~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~ 282 (388)
T 3tcs_A 218 VGHMLQDHGFCHFE-------E-PCPYWELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDIL 282 (388)
T ss_dssp HHHHHHHTTCCEEE-------C-CSCTTCHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHH
T ss_pred HHHHHhhcCCeEEE-------C-CCCccCHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCcc
Confidence 99999999999872 2 23455899999999999999999999999999999997667899887644
No 189
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=98.44 E-value=4.7e-06 Score=79.78 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=105.2
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCcccc---ccccccc----cccC---ChHHHHHHHHHHhhcc--cCcEEEEec
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFS---VSGGMGA----ALLS---KPELIHDILTMLKRNL--DVPVTCKIR 151 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~---~~~~~G~----~l~~---~p~~~~~iv~~v~~~~--~~pv~vK~r 151 (326)
.+++++.+.++.+.+ ||..+-+..+.+.... -+.|.+. ..-. ..++..++++++|+++ ++++.+...
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v~avR~avG~d~~l~vDaN 221 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHLEALRDGAGPDVEILLDLN 221 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHHHHHHHHHCTTSEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 368888887776654 9999999773221110 0001111 1111 1356778899999987 688999988
Q ss_pred CCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 152 LLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 152 ~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
.+|+.++++++++.+++.|+++|.. ...+++..+++++.+++||++.+.+.+++++.++++...+|.|++
T Consensus 222 ~~~~~~~A~~~~~~L~~~~i~~iE~----------P~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~ 291 (409)
T 3go2_A 222 FNAKPEGYLKILRELADFDLFWVEI----------DSYSPQGLAYVRNHSPHPISSCETLFGIREFKPFFDANAVDVAIV 291 (409)
T ss_dssp TCSCHHHHHHHHHHTTTSCCSEEEC----------CCSCHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCHHHHHHHHHHHhhcCCeEEEe----------CcCCHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEe
Confidence 8999999999999999999999972 124899999999999999999999999999999997666899987
Q ss_pred c
Q 020428 232 A 232 (326)
Q Consensus 232 G 232 (326)
-
T Consensus 292 k 292 (409)
T 3go2_A 292 D 292 (409)
T ss_dssp C
T ss_pred C
Confidence 5
No 190
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=98.43 E-value=1.6e-06 Score=81.98 Aligned_cols=126 Identities=10% Similarity=0.148 Sum_probs=100.7
Q ss_pred EEECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCCh
Q 020428 80 FQMGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSS 156 (326)
Q Consensus 80 vQl~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~ 156 (326)
..++. .+++++.+.++.+.+ ||+.+.++.| |+...+.++++|+++ ++++.+....+|+.
T Consensus 141 ~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~~~ 202 (375)
T 1r0m_A 141 VSLGIQADEQATVDLVRRHVEQGYRRIKLKIK------------------PGWDVQPVRATREAFPDIRLTVDANSAYTL 202 (375)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCCCG
T ss_pred EEecCCCCHHHHHHHHHHHHHhcccEEEEecC------------------hHHHHHHHHHHHHHcCCCeEEEeCCCCCCH
Confidence 34443 488888887776654 9999999763 133345577777765 67888888888998
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++ +++++.+++.|+++|. +.. .+.+++..+++++.+++||.+.+.+++.+++.++++...+|.|++=
T Consensus 203 ~~-~~~~~~l~~~~i~~iE-------qP~-~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 269 (375)
T 1r0m_A 203 AD-AGRLRQLDEYDLTYIE-------QPL-AWDDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLK 269 (375)
T ss_dssp GG-HHHHHTTGGGCCSCEE-------CCS-CTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEEC
T ss_pred HH-HHHHHHHHhCCCcEEE-------CCC-CcccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEEC
Confidence 89 9999999999999984 332 4568999999999999999999999999999999977779999883
No 191
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=98.43 E-value=9.7e-07 Score=77.99 Aligned_cols=144 Identities=13% Similarity=0.115 Sum_probs=99.5
Q ss_pred EEEEECCCCHHHHHHHHHHhhc-CCCEEEEcc--CCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 78 VVFQMGTSDAVRALTAAKMVCK-DVAAIDINM--GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~--gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
++..|...|...+.+..+.+.+ |+|.+.+-. |.-.+ +..+-.++++++++.++.|+.+-+-. .
T Consensus 7 i~psila~D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp-------------~~~~g~~~v~~lr~~~~~~~~vhlmv-~ 72 (230)
T 1tqj_A 7 VAPSILSADFSRLGEEIKAVDEAGADWIHVDVMDGRFVP-------------NITIGPLIVDAIRPLTKKTLDVHLMI-V 72 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSS-------------CBCBCHHHHHHHGGGCCSEEEEEEES-S
T ss_pred EEEEeeecCHhHHHHHHHHHHHcCCCEEEEEEEecCCCc-------------chhhhHHHHHHHHhhcCCcEEEEEEc-c
Confidence 6677878888888888888876 899765543 22111 11222367888888777788765544 3
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeec--ccC---------------------------------------------CCC--
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGR--KVA---------------------------------------------DRP-- 185 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r--~~~---------------------------------------------~~~-- 185 (326)
++ .++++.+.++|+|++++|.- ..+ ...
T Consensus 73 dp---~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D~v~~msv~pg~gg 149 (230)
T 1tqj_A 73 EP---EKYVEDFAKAGADIISVHVEHNASPHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCDLILIMSVNPGFGG 149 (230)
T ss_dssp SG---GGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCC----
T ss_pred CH---HHHHHHHHHcCCCEEEECcccccchhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCCEEEEEEeccccCC
Confidence 33 34567777888888888865 221 000
Q ss_pred --CCcCCHHHHHHHHHhc-----CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 186 --RDPAKWGEIADIVAAL-----SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 186 --~~~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
..+..++.++++++.. ++||.+-|||+. +++.++. ..|||++.+||+++..+.
T Consensus 150 q~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~-~~~~~~~-~aGad~vvvGSai~~a~d 209 (230)
T 1tqj_A 150 QSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKP-NNTWQVL-EAGANAIVAGSAVFNAPN 209 (230)
T ss_dssp CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCT-TTTHHHH-HHTCCEEEESHHHHTSSC
T ss_pred ccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCH-HHHHHHH-HcCCCEEEECHHHHCCCC
Confidence 0123467788888776 899999999997 8898888 689999999999876543
No 192
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=98.40 E-value=4e-06 Score=79.92 Aligned_cols=127 Identities=11% Similarity=-0.009 Sum_probs=101.6
Q ss_pred HHHHHHHHhh-cCCCEEEEc-cCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCC-ChHHHHHHH
Q 020428 89 RALTAAKMVC-KDVAAIDIN-MGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLK-SSQDTVELA 163 (326)
Q Consensus 89 ~~~~aa~~~~-~~~d~idlN-~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~-~~~~~~e~a 163 (326)
++.+.++... .||..+-++ .|-+ ..+++.-.++++++|+++ ++++.+....+| +.+++++++
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~~A~~~~ 221 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVCIIPND-------------KVSDKEIVAYLRELREVIGWDMDMMVDCLYRWTDWQKARWTF 221 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCT-------------TSCHHHHHHHHHHHHHHHCSSSEEEEECTTCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHH
Confidence 4544555444 599999984 3311 135778888999999987 678999988899 999999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
+.+++.|+++|. +. ..+.+++..+++++.+++||++.+.+.|++++.++++...+|.|++--+-.
T Consensus 222 ~~L~~~~i~~iE-------eP-~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~ 286 (394)
T 3mqt_A 222 RQLEDIDLYFIE-------AC-LQHDDLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRC 286 (394)
T ss_dssp HHTGGGCCSEEE-------SC-SCTTCHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTS
T ss_pred HHHhhcCCeEEE-------CC-CCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCcccc
Confidence 999999999984 22 245589999999999999999999999999999999777799998864433
No 193
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=98.40 E-value=2.2e-06 Score=75.42 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=93.2
Q ss_pred EEEEECCCCHHHHHHHHHHhhc-CCCEEEEcc--CCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 78 VVFQMGTSDAVRALTAAKMVCK-DVAAIDINM--GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~--gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
++..|.+.|++.+.+.++.+.+ |++.|++.. |.-.++. ....++++++++.++.|+.+-+-..
T Consensus 13 i~p~i~a~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~-------------~~~~~~i~~l~~~~~~~~~v~l~vn- 78 (230)
T 1rpx_A 13 VSPSILSANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI-------------TIGPLVVDSLRPITDLPLDVHLMIV- 78 (230)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB-------------CCCHHHHHHHGGGCCSCEEEEEESS-
T ss_pred EEEEeecCCHHHHHHHHHHHHHCCCCEEEEeeccCCccccc-------------ccCHHHHHHHHhccCCcEEEEEEec-
Confidence 5556677788888888888776 888777753 2111110 1113566777776666665544322
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeec--ccC-----------------------------C----------------CCCC
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGR--KVA-----------------------------D----------------RPRD 187 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r--~~~-----------------------------~----------------~~~~ 187 (326)
+ ..+.++.+.++|+|+|++|+- ... . .+.+
T Consensus 79 d---~~~~v~~~~~~Gad~v~vh~~~~~~~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g 155 (230)
T 1rpx_A 79 E---PDQRVPDFIKAGADIVSVHCEQSSTIHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGG 155 (230)
T ss_dssp S---HHHHHHHHHHTTCSEEEEECSTTTCSCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSS
T ss_pred C---HHHHHHHHHHcCCCEEEEEecCccchhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCC
Confidence 2 335677777889999988876 210 0 0001
Q ss_pred -cCCH---HHHHHHHHhc-----CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 188 -PAKW---GEIADIVAAL-----SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 188 -~~~~---~~i~~i~~~~-----~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
..+| +.++++++.+ ++|+++.|||+ ++.+.+++ ..|||+|.+||++...+.
T Consensus 156 ~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~-~~n~~~~~-~aGad~vvvgSaI~~a~d 215 (230)
T 1rpx_A 156 QSFIESQVKKISDLRKICAERGLNPWIEVDGGVG-PKNAYKVI-EAGANALVAGSAVFGAPD 215 (230)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTHHHHH-HHTCCEEEESHHHHTSSC
T ss_pred ccccHHHHHHHHHHHHHHHhcCCCceEEEECCCC-HHHHHHHH-HcCCCEEEEChhhhCCCC
Confidence 1233 4456666655 79999999998 78888888 589999999999876443
No 194
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=98.39 E-value=2.5e-06 Score=80.42 Aligned_cols=126 Identities=10% Similarity=0.150 Sum_probs=100.3
Q ss_pred EEECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCCh
Q 020428 80 FQMGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSS 156 (326)
Q Consensus 80 vQl~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~ 156 (326)
..++. .+++++.+.++.+.+ ||+.+.++.| |+...+.++++|+++ ++++.+....+|+.
T Consensus 134 ~~~g~~~~~~~~~~~a~~~~~~G~~~iKik~~------------------~~~d~~~v~avr~a~~~~~l~vDan~~~~~ 195 (369)
T 2zc8_A 134 VSLGIQPSVEDTLRVVERHLEEGYRRIKLKIK------------------PGWDYEVLKAVREAFPEATLTADANSAYSL 195 (369)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTTCSCEEEECB------------------TTBSHHHHHHHHHHCTTSCEEEECTTCCCG
T ss_pred EEecCCCCHHHHHHHHHHHHHhhhheeeeecC------------------hhHHHHHHHHHHHHcCCCeEEEecCCCCCH
Confidence 44443 478888887776654 9999999763 133345577777765 67888888888998
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++ +++++.+++.|+++|. +. ..+.+++..+++++.+++||.+.+.+.+.+++.++++...+|.|++=
T Consensus 196 ~~-~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik 262 (369)
T 2zc8_A 196 AN-LAQLKRLDELRLDYIE-------QP-LAYDDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVK 262 (369)
T ss_dssp GG-HHHHHGGGGGCCSCEE-------CC-SCTTCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred HH-HHHHHHHHhCCCcEEE-------CC-CCcccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEc
Confidence 88 9999999999999886 22 23568999999999999999999999999999999976668999884
No 195
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=98.37 E-value=2.1e-06 Score=82.66 Aligned_cols=150 Identities=9% Similarity=0.079 Sum_probs=107.7
Q ss_pred cEEEEECCCCHHHHHHHHHH-hhcCCCEEEEccCCCccccc---cccccc--------c--------ccCChHHHHHHHH
Q 020428 77 HVVFQMGTSDAVRALTAAKM-VCKDVAAIDINMGCPKSFSV---SGGMGA--------A--------LLSKPELIHDILT 136 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~---~~~~G~--------~--------l~~~p~~~~~iv~ 136 (326)
|+-....+.+++++.+.++. +.+||..+-+..|.|..... ..+.+- . .....++..++++
T Consensus 140 ~~y~~~~~~~~~~~~~~~~~~~~~Gf~~iKikvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~v~ 219 (426)
T 4e4f_A 140 MVYCHTTGHSIDEVLDDYAKHRDQGFKAIRVQCGVPGMETTYGMAKGKGLAYEPATKGSLPEEQLWSTEKYLDFTPKLFE 219 (426)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC-------------------CCSEESSSCCEEEECHHHHHHHHHHHHH
T ss_pred eEeEeCCCCCHHHHHHHHHHHHHcCCCEEEEeccCCccccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 45555667788877666554 44599999999887642110 001000 0 0011245678899
Q ss_pred HHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCH
Q 020428 137 MLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEY 214 (326)
Q Consensus 137 ~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~ 214 (326)
++|+++ ++++.+...-+|+.++++++++.++++|+++|. + +..+.+++..+++++.+++||++.+.+.++
T Consensus 220 avR~a~G~d~~L~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~ 291 (426)
T 4e4f_A 220 AVRDKFGFNEHLLHDMHHRLTPIEAARFGKSVEDYRLFWME-------D-PTPAENQACFRLIRQHTVTPIAVGEVFNSI 291 (426)
T ss_dssp HHHHHHTTSSEEEEECTTCSCHHHHHHHHHHTGGGCCSEEE-------C-CSCCSSGGGGHHHHTTCCSCEEECTTCCSG
T ss_pred HHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCCEEE-------C-CCChHHHHHHHHHHhcCCCCEEeCCCcCCH
Confidence 999988 689999988899999999999999999999984 2 224557888899999999999999999999
Q ss_pred HHHHHHHHhcCCcEEEeccc
Q 020428 215 DDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 215 ~d~~~~l~~~Gad~VmiGr~ 234 (326)
+++.++++...+|.|++--+
T Consensus 292 ~~~~~~i~~ga~d~v~~k~~ 311 (426)
T 4e4f_A 292 WDCKQLIEEQLIDYIRTTIT 311 (426)
T ss_dssp GGTHHHHHTTCCSEECCCTT
T ss_pred HHHHHHHHcCCCCEEEeCcc
Confidence 99999997666899987543
No 196
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=98.36 E-value=6.5e-06 Score=78.43 Aligned_cols=125 Identities=9% Similarity=-0.053 Sum_probs=100.2
Q ss_pred HHHHHHHHhh-cCCCEEEEc-cCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCC-ChHHHHHHH
Q 020428 89 RALTAAKMVC-KDVAAIDIN-MGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLK-SSQDTVELA 163 (326)
Q Consensus 89 ~~~~aa~~~~-~~~d~idlN-~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~-~~~~~~e~a 163 (326)
++.+.++... .||..+-++ .|.+ ..+++.-.+.++++|+++ ++++.+....+| +.+++++++
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~-------------~~~~~~d~e~v~avR~a~G~d~~l~vDaN~~~~~~~~A~~~~ 226 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKA-------------DWSTKEVAYYLRELRGILGHDTDMMVDYLYRFTDWYEVARLL 226 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTC-------------CCCHHHHHHHHHHHHHHHCSSSEEEEECTTCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCC-------------ccCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCCHHHHHHHH
Confidence 4554555444 599999983 4321 135777888999999987 678999888899 999999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
+.+++.|+++|. + +..+.+++..+++++.+++||++.+.+.|++++.++++...+|.|++--+
T Consensus 227 ~~L~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~ 289 (394)
T 3mkc_A 227 NSIEDLELYFAE-------A-TLQHDDLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYN 289 (394)
T ss_dssp HHTGGGCCSEEE-------S-CSCTTCHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTT
T ss_pred HHhhhcCCeEEE-------C-CCCchhHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCcc
Confidence 999999999984 2 22455899999999999999999999999999999997666899987643
No 197
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=98.34 E-value=7.4e-06 Score=77.97 Aligned_cols=132 Identities=11% Similarity=0.074 Sum_probs=107.0
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~ 152 (326)
|+-..++..+++++.+.++... .||..+.+..|++ +++.-.+.++++|+++ ++++.+....
T Consensus 155 ~~y~s~~~~~~e~~~~~a~~~~~~G~~~~KlKvg~~---------------~~~~d~~~v~avR~a~gg~~~~L~vDaN~ 219 (391)
T 4e8g_A 155 PSYYATGIGQPDEIARIAAEKVAEGFPRLQIKIGGR---------------PVEIDIETVRKVWERIRGTGTRLAVDGNR 219 (391)
T ss_dssp ECCEEECSCCHHHHHHHHHHHHHTTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTTTCEEEEECTT
T ss_pred EEeEEcCCCCHHHHHHHHHHHHHcCCcEEEEcCCCC---------------CHHHHHHHHHHHHHHhCCCCCeEEEeCCC
Confidence 4445667778998888777654 4999999998863 3556667788887765 4678888888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+..++.++++.+++.++ +| +|. ..+++..+++++.+++||.+...+.+..++.++++...+|.|++-
T Consensus 220 ~w~~~~A~~~~~~L~~~~i-~i-------EeP---~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik 288 (391)
T 4e8g_A 220 SLPSRDALRLSRECPEIPF-VL-------EQP---CNTLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMK 288 (391)
T ss_dssp CCCHHHHHHHHHHCTTSCE-EE-------ESC---SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEE
T ss_pred CCCHHHHHHHHHHHhhcCe-EE-------ecC---CccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 9999999999999999988 76 222 348999999999999999999999999999999976668999886
Q ss_pred cc
Q 020428 233 RG 234 (326)
Q Consensus 233 r~ 234 (326)
-+
T Consensus 289 ~~ 290 (391)
T 4e8g_A 289 LT 290 (391)
T ss_dssp HH
T ss_pred cc
Confidence 43
No 198
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=98.34 E-value=7.8e-06 Score=72.13 Aligned_cols=130 Identities=12% Similarity=0.039 Sum_probs=87.7
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecCC-CChHHHHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRLL-KSSQDTVELAR 164 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~g-~~~~~~~e~a~ 164 (326)
...++-..+..|+|.||+.+ ..|+... .+.+-+.++++.+ +.|+-|=+-.+ .++++....++
T Consensus 90 k~~e~~~Av~~GAdEID~vi----------nig~~~~----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~~e~i~~a~r 155 (234)
T 1n7k_A 90 KLVEAQTVLEAGATELDVVP----------HLSLGPE----AVYREVSGIVKLAKSYGAVVKVILEAPLWDDKTLSLLVD 155 (234)
T ss_dssp HHHHHHHHHHHTCCEEEECC----------CGGGCHH----HHHHHHHHHHHHHHHTTCEEEEECCGGGSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEec----------cchHHHH----HHHHHHHHHHHHHhhcCCeEEEEEeccCCCHHHHHHHHH
Confidence 34444455556999999864 2332222 4555556666655 35653323222 35677888889
Q ss_pred HHHHcCCcEEEEeecccCCCCC-CcCCHHHHHH--HHHhcCCcEEEeCCCCCHHHHHHHHHhcCCc--EEEeccchhc
Q 020428 165 RIEKTGVSALAVHGRKVADRPR-DPAKWGEIAD--IVAALSIPVIANGDVFEYDDFQRIKTAAGAS--SVMAARGALW 237 (326)
Q Consensus 165 ~l~~~G~d~i~vh~r~~~~~~~-~~~~~~~i~~--i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad--~VmiGr~~l~ 237 (326)
...++|+|+|-.. .+... +.+..+.++. +++.+++||-++|||+|.+++.+++ +.|++ |+..|+.++.
T Consensus 156 ia~eaGADfVKTs----TG~~~~~gAt~~dv~l~~m~~~v~v~VKaaGGirt~~~al~~i-~aGa~RiG~S~g~~I~~ 228 (234)
T 1n7k_A 156 SSRRAGADIVKTS----TGVYTKGGDPVTVFRLASLAKPLGMGVKASGGIRSGIDAVLAV-GAGADIIGTSSAVKVLE 228 (234)
T ss_dssp HHHHTTCSEEESC----CSSSCCCCSHHHHHHHHHHHGGGTCEEEEESSCCSHHHHHHHH-HTTCSEEEETTHHHHHH
T ss_pred HHHHhCCCEEEeC----CCCCCCCCCCHHHHHHHHHHHHHCCCEEEecCCCCHHHHHHHH-HcCccccchHHHHHHHH
Confidence 9999999999543 22222 4556666666 7776679999999999999999999 69999 8877777654
No 199
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=98.34 E-value=9.3e-06 Score=77.01 Aligned_cols=136 Identities=13% Similarity=0.199 Sum_probs=107.2
Q ss_pred cEEEEECCCCHHH-HHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVR-ALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~-~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+-..++..+++. ..++++.+.+ ||..+-+..|+. +++.-.+.++++|+++ ++++.+....
T Consensus 139 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN~ 203 (382)
T 3dgb_A 139 PVAWTLASGDTAKDIAEAQKMLDLRRHRIFKLKIGAG---------------EVDRDLAHVIAIKKALGDSASVRVDVNQ 203 (382)
T ss_dssp EBCEEECSSCHHHHHHHHHHHHHTTSCSEEEEECCSS---------------CHHHHHHHHHHHHHHHGGGSEEEEECTT
T ss_pred eEEEEecCCChHHHHHHHHHHHHhCCCCEEEEeeCCC---------------CHHHHHHHHHHHHHHcCCCCeEEEeCCC
Confidence 3333454445654 5566666664 899999987642 3456677889999887 4789999988
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+..++.++++.+++.|+.+|- | +..+.|++..+++++.+++||.+...+.+..++.++++...+|.|++-
T Consensus 204 ~~~~~~A~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k 275 (382)
T 3dgb_A 204 AWDEAVALRACRILGGNGIDLIE-------Q-PISRNNRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALK 275 (382)
T ss_dssp CBCHHHHHHHHHHHHTTTCCCEE-------C-CBCTTCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred CCCHHHHHHHHHHHhhcCcCeee-------C-CCCccCHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEec
Confidence 99999999999999999998873 2 234568999999999999999999999999999999977779999886
Q ss_pred cch
Q 020428 233 RGA 235 (326)
Q Consensus 233 r~~ 235 (326)
-.-
T Consensus 276 ~~~ 278 (382)
T 3dgb_A 276 IAK 278 (382)
T ss_dssp HHH
T ss_pred ccc
Confidence 443
No 200
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=98.33 E-value=5.5e-06 Score=79.11 Aligned_cols=134 Identities=8% Similarity=0.042 Sum_probs=104.8
Q ss_pred cEEEEEC-CCC--HHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEe
Q 020428 77 HVVFQMG-TSD--AVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKI 150 (326)
Q Consensus 77 p~~vQl~-g~~--~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~ 150 (326)
|+-..++ ..+ ++.+.+.++.+.+ ||..+.++++ | +.-.+.++++|+++ ++++.+..
T Consensus 151 ~~~~s~g~~~~~~~e~~~~~a~~~~~~G~~~iKlKv~-~-----------------~~d~~~v~avR~a~G~~~~L~vDa 212 (400)
T 3mwc_A 151 ESGAALGIPEDGRIETLIHQVEESLQEGYRRIKIKIK-P-----------------GWDVEPLQETRRAVGDHFPLWTDA 212 (400)
T ss_dssp EBCEEECCCTTCCHHHHHHHHHHHHHHTCSCEEEECB-T-----------------TBSHHHHHHHHHHHCTTSCEEEEC
T ss_pred EeeEEeccCCCCCHHHHHHHHHHHHHcCCCEEEEEeC-c-----------------chHHHHHHHHHHhcCCCCEEEEeC
Confidence 4444554 335 8888887776554 9999999873 1 11245677888876 67899999
Q ss_pred cCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEE
Q 020428 151 RLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 151 r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vm 230 (326)
..+|+.++ +++++.+++.|+++|- | +..+.+++..+++++.+++||.+...+.+.+++.++++...+|.|+
T Consensus 213 N~~w~~~~-~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~ 283 (400)
T 3mwc_A 213 NSSFELDQ-WETFKAMDAAKCLFHE-------Q-PLHYEALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWN 283 (400)
T ss_dssp TTCCCGGG-HHHHHHHGGGCCSCEE-------S-CSCTTCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEE
T ss_pred CCCCCHHH-HHHHHHHHhcCCCEEe-------C-CCChhhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEE
Confidence 88999988 9999999999999883 2 2345689999999999999999999999999999999766789998
Q ss_pred eccchhc
Q 020428 231 AARGALW 237 (326)
Q Consensus 231 iGr~~l~ 237 (326)
+--+-.+
T Consensus 284 ~k~~~~G 290 (400)
T 3mwc_A 284 IKIQRVG 290 (400)
T ss_dssp ECHHHHT
T ss_pred EcchhhC
Confidence 8654433
No 201
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=98.31 E-value=1.3e-05 Score=69.14 Aligned_cols=139 Identities=17% Similarity=0.127 Sum_probs=85.8
Q ss_pred CCcEEEEECCCC-HHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 75 RNHVVFQMGTSD-AVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 75 ~~p~~vQl~g~~-~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
+.|+++-+...| ++.+.+.+. ..|+|+|-+|.+.. .+.+.++++.+++. +.++.+-+- .
T Consensus 53 ~~~i~~~l~~~di~~~~~~~a~--~~Gad~v~vh~~~~----------------~~~~~~~~~~~~~~-g~~~gv~~~-s 112 (207)
T 3ajx_A 53 DKIVFADMKTMDAGELEADIAF--KAGADLVTVLGSAD----------------DSTIAGAVKAAQAH-NKGVVVDLI-G 112 (207)
T ss_dssp TSEEEEEEEECSCHHHHHHHHH--HTTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEECT-T
T ss_pred CCeEEEEEEecCccHHHHHHHH--hCCCCEEEEeccCC----------------hHHHHHHHHHHHHc-CCceEEEEe-c
Confidence 357888776667 777654332 23899999886422 23344555555542 555433331 1
Q ss_pred CChHHHHHHHHHHHHcCCcEE-EEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 154 KSSQDTVELARRIEKTGVSAL-AVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i-~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
. .+..+.++.+.+.|+|++ ...+.+.......+.. +.+++++.. ++|+++.|||+ ++++.+++ ..|||+|.+|
T Consensus 113 ~--~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~-~~i~~~~~~-~~pi~v~GGI~-~~~~~~~~-~aGad~vvvG 186 (207)
T 3ajx_A 113 I--EDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN-GLLAAGEKA-RVPFSVAGGVK-VATIPAVQ-KAGAEVAVAG 186 (207)
T ss_dssp C--SSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH-HHHHHHHHH-TSCEEEESSCC-GGGHHHHH-HTTCSEEEES
T ss_pred C--CChHHHHHHHHHhCCCEEEEEecccccccCCCchH-HHHHHhhCC-CCCEEEECCcC-HHHHHHHH-HcCCCEEEEe
Confidence 2 122233456667799999 4445543211111222 445554443 79999999998 78888888 6999999999
Q ss_pred cchhcCc
Q 020428 233 RGALWNA 239 (326)
Q Consensus 233 r~~l~~P 239 (326)
|+++..+
T Consensus 187 saI~~~~ 193 (207)
T 3ajx_A 187 GAIYGAA 193 (207)
T ss_dssp HHHHTSS
T ss_pred eeccCCC
Confidence 9987644
No 202
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=98.30 E-value=2.2e-05 Score=74.41 Aligned_cols=136 Identities=9% Similarity=0.131 Sum_probs=104.8
Q ss_pred cEEEEECCCCHHH-HHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVR-ALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~-~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~ 152 (326)
|+-..++..+++. ..++++.+.+ ||..+-+..|+. +++.-.+.++++|+++ ++++.+....
T Consensus 138 ~~~~t~~~~~~~~~~~~~~~~~~~~G~~~~KiKvg~~---------------~~~~d~~~v~avR~a~g~~~~l~vDaN~ 202 (381)
T 3fcp_A 138 PVLWTLASGDTAKDIAEGEKLLAEGRHRAFKLKIGAR---------------ELATDLRHTRAIVEALGDRASIRVDVNQ 202 (381)
T ss_dssp EBCEEECSSCHHHHHHHHHHHTC----CEEEEECCSS---------------CHHHHHHHHHHHHHHTCTTCEEEEECTT
T ss_pred eeEEEecCCChHHHHHHHHHHHHhCCCCEEEEecCCC---------------ChHHHHHHHHHHHHHcCCCCeEEEECCC
Confidence 3434455556665 4455555654 899999987742 3556677899999987 4788888888
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|+..++.++++.+++.|+.+|- |. ..+.|++.++++++.+++||.+...+.|..++.++++...+|.|++-
T Consensus 203 ~~~~~~A~~~~~~l~~~~i~~iE-------eP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k 274 (381)
T 3fcp_A 203 AWDAATGAKGCRELAAMGVDLIE-------QP-VSAHDNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALK 274 (381)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEE-------CC-BCTTCHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred CCCHHHHHHHHHHHhhcCcccee-------CC-CCcccHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEec
Confidence 99999999999999999998872 22 34568999999999999999999999999999999976679999886
Q ss_pred cch
Q 020428 233 RGA 235 (326)
Q Consensus 233 r~~ 235 (326)
-+-
T Consensus 275 ~~~ 277 (381)
T 3fcp_A 275 IAK 277 (381)
T ss_dssp HHH
T ss_pred ccc
Confidence 443
No 203
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=98.29 E-value=4.1e-06 Score=72.94 Aligned_cols=142 Identities=11% Similarity=0.177 Sum_probs=87.7
Q ss_pred EEEEECCCCHHHHHHHHHHhhc-CCCEEEEcc--CC-CccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 78 VVFQMGTSDAVRALTAAKMVCK-DVAAIDINM--GC-PKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~--gc-P~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
+...|...|+..+.+.++.+.+ |++.+.+-. |. |. .+-..+ ++++++++.++.|+.+-+-..
T Consensus 6 ~~~~i~a~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~----------~~~~g~----~~i~~i~~~~~~~~~v~l~v~ 71 (220)
T 2fli_A 6 IAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVP----------NISFGA----DVVASMRKHSKLVFDCHLMVV 71 (220)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSS----------CBCBCH----HHHHHHHTTCCSEEEEEEESS
T ss_pred EEEEEEeCCHHHHHHHHHHHHHcCCCEEEEEeecCCCCC----------ccccCH----HHHHHHHHhCCCCEEEEEeec
Confidence 4455667788888888888876 788765542 32 11 011113 445666666666665544321
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccC---------------------------------------------CCCCC-
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVA---------------------------------------------DRPRD- 187 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~---------------------------------------------~~~~~- 187 (326)
++. +.++.+.++|+|.+++|+-..+ ..+.+
T Consensus 72 -d~~---~~i~~~~~~gad~v~vh~~~~~~~~~~~~~~~~~g~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~ 147 (220)
T 2fli_A 72 -DPE---RYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQ 147 (220)
T ss_dssp -SGG---GGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTSEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSC
T ss_pred -CHH---HHHHHHHHcCCCEEEEccCccccHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCccc
Confidence 221 2346777778888888743210 00011
Q ss_pred cCCH---HHHHHHHHhc-----CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 188 PAKW---GEIADIVAAL-----SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 188 ~~~~---~~i~~i~~~~-----~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
...| +.++++++.+ ++||++.|||+ ++++.+++ ..|+|+|.+||+++..+
T Consensus 148 ~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GGI~-~~~~~~~~-~~Gad~vvvGsai~~~~ 205 (220)
T 2fli_A 148 AFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD-NKTIRACY-EAGANVFVAGSYLFKAS 205 (220)
T ss_dssp CCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCC-TTTHHHHH-HHTCCEEEESHHHHTSS
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCceEEEECcCC-HHHHHHHH-HcCCCEEEEChHHhCCC
Confidence 1123 4456666554 79999999999 78898888 57999999999987654
No 204
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=98.29 E-value=4.5e-06 Score=73.47 Aligned_cols=140 Identities=10% Similarity=0.107 Sum_probs=94.3
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKS 155 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~ 155 (326)
.|+.+-|+.+||+.+.+.+.. .|+|+|-+|.+.+ ++.+.+.++.+++. ++.+.+-+.....
T Consensus 65 ~~~~v~lmv~d~~~~i~~~~~--agad~v~vH~~~~----------------~~~~~~~~~~i~~~-g~~igv~~~p~t~ 125 (228)
T 1h1y_A 65 AYLDCHLMVTNPSDYVEPLAK--AGASGFTFHIEVS----------------RDNWQELIQSIKAK-GMRPGVSLRPGTP 125 (228)
T ss_dssp SEEEEEEESSCGGGGHHHHHH--HTCSEEEEEGGGC----------------TTTHHHHHHHHHHT-TCEEEEEECTTSC
T ss_pred CcEEEEEEecCHHHHHHHHHH--cCCCEEEECCCCc----------------ccHHHHHHHHHHHc-CCCEEEEEeCCCC
Confidence 478889999998776554433 4899999986522 11224556666554 6666655543222
Q ss_pred hHHHHHHHHHHHHc--CCcEEEEeecccCC--CCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEE
Q 020428 156 SQDTVELARRIEKT--GVSALAVHGRKVAD--RPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 156 ~~~~~e~a~~l~~~--G~d~i~vh~r~~~~--~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~Vm 230 (326)
.+.++.+.+. ++|+|.+....... ..-.+..++.++++++.. ++||++.|||+. +.+.+++ ..|+|++.
T Consensus 126 ----~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~-~ni~~~~-~aGaD~vv 199 (228)
T 1h1y_A 126 ----VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGP-STIDVAA-SAGANCIV 199 (228)
T ss_dssp ----GGGGHHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCST-TTHHHHH-HHTCCEEE
T ss_pred ----HHHHHHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCH-HHHHHHH-HcCCCEEE
Confidence 2334555565 89999885543321 111233456677888877 899999999987 8888888 57999999
Q ss_pred eccchhcCcc
Q 020428 231 AARGALWNAS 240 (326)
Q Consensus 231 iGr~~l~~P~ 240 (326)
+||+++..|.
T Consensus 200 vGsai~~~~d 209 (228)
T 1h1y_A 200 AGSSIFGAAE 209 (228)
T ss_dssp ESHHHHTSSC
T ss_pred ECHHHHCCCC
Confidence 9999876543
No 205
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=98.25 E-value=3.4e-05 Score=67.63 Aligned_cols=126 Identities=13% Similarity=0.071 Sum_probs=87.6
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEE--ecCC-CChHHHHHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCK--IRLL-KSSQDTVELARR 165 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK--~r~g-~~~~~~~e~a~~ 165 (326)
...++.. +..|+|.||+-+ .+|...-.+.+.+.+-+.++++.++- ..+| +-.+ .+.++....++.
T Consensus 69 k~~E~~~-i~~GAdEID~Vi----------nig~~~~g~~~~v~~ei~~v~~a~~~-~~lKvIlEt~~Lt~eei~~a~~i 136 (226)
T 1vcv_A 69 RIALVSR-LAEVADEIDVVA----------PIGLVKSRRWAEVRRDLISVVGAAGG-RVVKVITEEPYLRDEERYTLYDI 136 (226)
T ss_dssp HHHHHHH-HTTTCSEEEEEC----------CHHHHHTTCHHHHHHHHHHHHHHTTT-SEEEEECCGGGCCHHHHHHHHHH
T ss_pred HHHHHHH-HHCCCCEEEEec----------chhhhcCCCHHHHHHHHHHHHHHHcC-CCceEEEeccCCCHHHHHHHHHH
Confidence 4556666 767999999864 35555567888888889999888742 2445 3222 356778888999
Q ss_pred HHHcCCcEEEEe-eccc-----CCCCCCcCCHHHHHHHHHh---cC--CcEEEeCCCCCHHHHHHHHHhc---CCc
Q 020428 166 IEKTGVSALAVH-GRKV-----ADRPRDPAKWGEIADIVAA---LS--IPVIANGDVFEYDDFQRIKTAA---GAS 227 (326)
Q Consensus 166 l~~~G~d~i~vh-~r~~-----~~~~~~~~~~~~i~~i~~~---~~--iPVi~nGgI~s~~d~~~~l~~~---Gad 227 (326)
..++|+|+|-.+ |.+. .....+.+..+.++.+++. ++ +||-++|||+|.+++.+++ +. |++
T Consensus 137 a~eaGADfVKTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~i-~a~~~Ga~ 211 (226)
T 1vcv_A 137 IAEAGAHFIKSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAIV-DAIGWGED 211 (226)
T ss_dssp HHHHTCSEEECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHHH-HHHCSCSC
T ss_pred HHHcCCCEEEeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHH-HHHHCCCC
Confidence 999999999543 2220 0011245556655555554 54 9999999999999999999 46 776
No 206
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=98.25 E-value=4.3e-06 Score=79.58 Aligned_cols=128 Identities=7% Similarity=-0.067 Sum_probs=99.9
Q ss_pred HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHH
Q 020428 88 VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELAR 164 (326)
Q Consensus 88 ~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~ 164 (326)
+.+.+.|+.+.+ ||+.+.++.|-..... .. .++++...++++++|+++ ++++.+...-+|+.++++++++
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~------~~-~~~~~~~~e~v~avR~~~g~d~~l~vDan~~~~~~~ai~~~~ 222 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHM------PL-WEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVLA 222 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTS------CH-HHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccC------Cc-cccHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHH
Confidence 888888776655 9999999876211100 00 125677788999999877 5788888877899999999999
Q ss_pred HHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh-----cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 165 RIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA-----LSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 165 ~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~-----~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
.+++.|+++|- +.. . .+++..+++++. +++||++.+ +.++++++++++...+|.|++=
T Consensus 223 ~l~~~~i~~iE-------~P~-~-~d~~~~~~l~~~l~~~g~~iPIa~dE-~~~~~~~~~~i~~~~~d~v~ik 285 (392)
T 3p3b_A 223 ALSDVNLYWLE-------EAF-H-EDEALYEDLKEWLGQRGQNVLIADGE-GLASPHLIEWATRGRVDVLQYD 285 (392)
T ss_dssp HTTTSCEEEEE-------CSS-S-CCHHHHHHHHHHHHHHTCCCEEEECC-SSCCTTHHHHHHTTSCCEECCB
T ss_pred HHHhcCCCEEe-------cCC-c-ccHHHHHHHHHhhccCCCCccEEecC-CCCHHHHHHHHHcCCCCEEEeC
Confidence 99999988763 222 2 578999999998 899999999 9999999999975568988773
No 207
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=98.23 E-value=9.8e-06 Score=71.41 Aligned_cols=144 Identities=12% Similarity=0.137 Sum_probs=99.1
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCC--EEEEccCCCccccccccccccccCChHHHHHHHHHHhhc--ccCcEEEEec
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVA--AIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN--LDVPVTCKIR 151 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d--~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~--~~~pv~vK~r 151 (326)
.+..+|...|...+.+..+.+.+ |+| .+|+=-|.=+|+.+ +| .++++++|+. .+.|+.+++-
T Consensus 6 ~i~psil~~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~---~G----------~~~v~~ir~~~~~~~~~dvhLm 72 (228)
T 3ovp_A 6 KIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT---FG----------HPVVESLRKQLGQDPFFDMHMM 72 (228)
T ss_dssp EEEEBCTTSCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC---BC----------HHHHHHHHHHHCSSSCEEEEEE
T ss_pred EeeeeheeCCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc---cC----------HHHHHHHHHhhCCCCcEEEEEE
Confidence 46677888888888888888876 777 56664443233221 23 2457777777 4788888876
Q ss_pred CCCChHHHHHHHHHHHHcCCcEEEEeecccC---------------------------------------------CCCC
Q 020428 152 LLKSSQDTVELARRIEKTGVSALAVHGRKVA---------------------------------------------DRPR 186 (326)
Q Consensus 152 ~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~---------------------------------------------~~~~ 186 (326)
. .++ ..+++.+.++|+|.|++|.-... .+..
T Consensus 73 v-~~p---~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D~Vl~msv~pGf~ 148 (228)
T 3ovp_A 73 V-SKP---EQWVKPMAVAGANQYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFG 148 (228)
T ss_dssp C-SCG---GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCSEEEEESSCTTTC
T ss_pred e-CCH---HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCCeEEEeeecCCCC
Confidence 4 233 34566778899999999854211 0111
Q ss_pred C----cCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 187 D----PAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 187 ~----~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
| +..++-++++++.. ++||.+.|||+ ++.+..+. ..|||.+++||++...+
T Consensus 149 Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~t~~~~~-~aGAd~~VvGsaIf~a~ 204 (228)
T 3ovp_A 149 GQKFMEDMMPKVHWLRTQFPSLDIEVDGGVG-PDTVHKCA-EAGANMIVSGSAIMRSE 204 (228)
T ss_dssp SCCCCGGGHHHHHHHHHHCTTCEEEEESSCS-TTTHHHHH-HHTCCEEEESHHHHTCS
T ss_pred CcccCHHHHHHHHHHHHhcCCCCEEEeCCcC-HHHHHHHH-HcCCCEEEEeHHHhCCC
Confidence 1 23456677777765 68999999995 89999999 69999999999977543
No 208
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=98.22 E-value=2.2e-06 Score=74.27 Aligned_cols=75 Identities=19% Similarity=0.239 Sum_probs=60.0
Q ss_pred HHHHHHcCCcEEEEeecccCC--CCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 163 ARRIEKTGVSALAVHGRKVAD--RPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~--~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+..+.+.|+|+|.+++..... ....+.+|+.++++++.+++||++.|||+ ++++.+++ ..|+++|++|++++..|
T Consensus 121 ~~~~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~pvia~GGI~-~~nv~~~~-~~Ga~gv~vgs~i~~~~ 197 (215)
T 1xi3_A 121 ALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESVKIPVVAIGGIN-KDNAREVL-KTGVDGIAVISAVMGAE 197 (215)
T ss_dssp HHHHHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHCSSCEEEESSCC-TTTHHHHH-TTTCSEEEESHHHHTSS
T ss_pred HHHHHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhCCCCEEEECCcC-HHHHHHHH-HcCCCEEEEhHHHhCCC
Confidence 445677899999987632111 11245689999999988899999999999 99999998 58999999999998765
No 209
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=98.22 E-value=2.6e-06 Score=74.49 Aligned_cols=73 Identities=16% Similarity=0.194 Sum_probs=58.6
Q ss_pred HHHHHHcCCcEEEEe----ecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 163 ARRIEKTGVSALAVH----GRKVADRPRDPAKWGEIADIVAALS-IPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 163 a~~l~~~G~d~i~vh----~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+..+.+.|+|+|.+. ..+. +.+..+.+|+.++++++.++ +||++.|||. ++++.+++ ..|+++|.+|++++.
T Consensus 129 ~~~a~~~g~d~v~~~~v~~t~~~-~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~-~~nv~~~~-~~Ga~gv~vgs~i~~ 205 (227)
T 2tps_A 129 VKQAEEDGADYVGLGPIYPTETK-KDTRAVQGVSLIEAVRRQGISIPIVGIGGIT-IDNAAPVI-QAGADGVSMISAISQ 205 (227)
T ss_dssp HHHHHHHTCSEEEECCSSCCCSS-SSCCCCCTTHHHHHHHHTTCCCCEEEESSCC-TTTSHHHH-HTTCSEEEESHHHHT
T ss_pred HHHHHhCCCCEEEECCCcCCCCC-CCCCCccCHHHHHHHHHhCCCCCEEEEcCCC-HHHHHHHH-HcCCCEEEEhHHhhc
Confidence 556678899999972 2222 22234567999999998888 9999999999 99999998 589999999999876
Q ss_pred C
Q 020428 238 N 238 (326)
Q Consensus 238 ~ 238 (326)
.
T Consensus 206 ~ 206 (227)
T 2tps_A 206 A 206 (227)
T ss_dssp S
T ss_pred C
Confidence 5
No 210
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=98.20 E-value=1.8e-05 Score=75.90 Aligned_cols=149 Identities=7% Similarity=0.026 Sum_probs=112.0
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccc-----ccccccccc---CChHHHHHHHHHHhhcc--cC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSV-----SGGMGAALL---SKPELIHDILTMLKRNL--DV 144 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~-----~~~~G~~l~---~~p~~~~~iv~~v~~~~--~~ 144 (326)
.|+...+.+.+++++.+.++...+ ||..+-+..|.+..+.. ......... .+++...+.++++|+++ ++
T Consensus 143 v~~y~~~~~~~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~ 222 (421)
T 4hnl_A 143 IPAYTHAVADNLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQF 222 (421)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred cceecccCCCCHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCc
Confidence 355566667788888877776654 99999999887543221 111111122 23456677888888887 56
Q ss_pred cEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc
Q 020428 145 PVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA 224 (326)
Q Consensus 145 pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~ 224 (326)
.+.+....+|+..+++++++.+++.++.+|- .+..+.|++..+++++.+++||.+.-.+.|..++.++++..
T Consensus 223 ~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--------eP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~ 294 (421)
T 4hnl_A 223 QMLHDVHERLHPNQAIQFAKAAEPYQLFFLE--------DILPPDQSHWLTQLRSQSATPIATGELFNNPMEWQELVKNR 294 (421)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHGGGCCSEEE--------CCSCGGGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHHTT
T ss_pred eEeccccccCCHHHHHHHHHHhhhhhhcccc--------cCCcccchHHHHHHHhcCCCCeecCcceehhHHHHHHHhcC
Confidence 7777777789999999999999999998872 22345588899999999999999999999999999999766
Q ss_pred CCcEEEec
Q 020428 225 GASSVMAA 232 (326)
Q Consensus 225 Gad~VmiG 232 (326)
.+|.|++-
T Consensus 295 a~d~v~~d 302 (421)
T 4hnl_A 295 QIDFMRAH 302 (421)
T ss_dssp CCSEECCC
T ss_pred CceEEEeC
Confidence 68988764
No 211
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=98.19 E-value=3.5e-05 Score=74.44 Aligned_cols=127 Identities=11% Similarity=0.070 Sum_probs=104.5
Q ss_pred CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 84 TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
+.+++++.+.++...+ ||..+-+..|+ +++.-.+.++++|+++ ++++.+....+|+..+++
T Consensus 199 ~~~~e~~~~~a~~~~~~Gf~~~KlKvG~----------------~~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~ 262 (441)
T 4a35_A 199 GYSDDTLKQLCAQALKDGWTRFKVKVGA----------------DLQDDMRRCQIIRDMIGPEKTLMMDANQRWDVPEAV 262 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCCEEEEECSS----------------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHH
Confidence 5588998887776654 99999998774 3566677788899887 678888888899999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh---cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA---LSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~---~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
++++.+++.++.+| ++ +..+.|++..+++++. +++||.+.-.+.|..++.++++...+|.|++--+
T Consensus 263 ~~~~~L~~~~~~~i-------Ee-P~~~~d~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~ 331 (441)
T 4a35_A 263 EWMSKLAKFKPLWI-------EE-PTSPDDILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSC 331 (441)
T ss_dssp HHHHHHGGGCCSEE-------EC-CSCTTCHHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTT
T ss_pred HHHHhhcccCccEE-------eC-CCCcccHHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECcc
Confidence 99999999999887 22 2345688889999987 7899999999999999999997667898887533
No 212
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=98.15 E-value=5.2e-06 Score=74.46 Aligned_cols=155 Identities=17% Similarity=0.143 Sum_probs=93.5
Q ss_pred CCcEEEEECCCCHH-HHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEe
Q 020428 75 RNHVVFQMGTSDAV-RALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKI 150 (326)
Q Consensus 75 ~~p~~vQl~g~~~~-~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~ 150 (326)
+.|+..|+.+.||- .+....+.+++ ||.++ +|. |..-...+.+-..|..++--..+.++.++.+- ++ +++=+
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~--ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL-~Ti~~ 169 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNF--PTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDL-LTTPY 169 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EEC--SCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTC-EECCE
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EEC--CCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCC-eEEEe
Confidence 46999999988874 33333355655 99999 997 54444445555555555444444555554432 22 12211
Q ss_pred cCCCChHHHHHHHHHHHHcCCcEEEEeec-ccCCCC--CCc---CC-HHHHHHHHHhc-----CCcEE-EeCCCCCHHHH
Q 020428 151 RLLKSSQDTVELARRIEKTGVSALAVHGR-KVADRP--RDP---AK-WGEIADIVAAL-----SIPVI-ANGDVFEYDDF 217 (326)
Q Consensus 151 r~g~~~~~~~e~a~~l~~~G~d~i~vh~r-~~~~~~--~~~---~~-~~~i~~i~~~~-----~iPVi-~nGgI~s~~d~ 217 (326)
- ...+.++.+.++|+|.|.+|.- |..+.- ..+ .+ -+.+.++.+.+ ++.|+ +.|+|.+++|+
T Consensus 170 v------~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv 243 (286)
T 2p10_A 170 V------FSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDA 243 (286)
T ss_dssp E------CSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHH
T ss_pred c------CCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHH
Confidence 1 2345567778999999999965 322211 111 12 33444444432 55555 55599999999
Q ss_pred HHHHHhc-CCcEEEeccchhcCc
Q 020428 218 QRIKTAA-GASSVMAARGALWNA 239 (326)
Q Consensus 218 ~~~l~~~-Gad~VmiGr~~l~~P 239 (326)
+.+++.+ |++|+..++++..=|
T Consensus 244 ~~~l~~t~G~~G~~gASsier~p 266 (286)
T 2p10_A 244 RFILDSCQGCHGFYGASSMERLP 266 (286)
T ss_dssp HHHHHHCTTCCEEEESHHHHHHH
T ss_pred HHHHhcCCCccEEEeehhhhcCC
Confidence 9999543 799999999866544
No 213
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=98.13 E-value=7.7e-05 Score=70.21 Aligned_cols=133 Identities=15% Similarity=0.195 Sum_probs=104.0
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLK 154 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~ 154 (326)
|+...+...+++++.+.++... .||..+-+..|.. +++.-.+.++++|+.+ +.++.+...-+|
T Consensus 134 ~~~~~~~~~~~e~~~~~a~~~~~~G~~~iK~Kvg~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~ 198 (365)
T 3ik4_A 134 ETDMTITAGDEVHAAASAKAILARGIKSIKVKTAGV---------------DVAYDLARLRAIHQAAPTAPLIVDGNCGY 198 (365)
T ss_dssp EBCEEECCSCHHHHHHHHHHHHHTTCCCEEEECCSS---------------CHHHHHHHHHHHHHHSSSCCEEEECTTCC
T ss_pred eeeEEecCCCHHHHHHHHHHHHHcCCCEEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCC
Confidence 3445566778998887776654 4999999877632 3566677888888876 556777777789
Q ss_pred ChHHHHHHHHHH--HHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRI--EKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l--~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+..++.++++.+ ++.++.+|- | +..+.|++..+++++.+++||.+.-.+.+..++.++++...+|.|++-
T Consensus 199 ~~~~A~~~~~~L~~~~~~i~~iE-------e-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik 270 (365)
T 3ik4_A 199 DVERALAFCAACKAESIPMVLFE-------Q-PLPREDWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIK 270 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE-------C-CSCTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEEC
T ss_pred CHHHHHHHHHHHhhCCCCceEEE-------C-CCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEc
Confidence 999999999999 667776663 2 234558999999999999999999999999999999976778988775
No 214
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=98.13 E-value=4.2e-06 Score=74.46 Aligned_cols=76 Identities=12% Similarity=0.071 Sum_probs=58.8
Q ss_pred HHHHHHHHcCCcEEEEeecccC---CCCCCcCCHHHHHHHHHh--cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccch
Q 020428 161 ELARRIEKTGVSALAVHGRKVA---DRPRDPAKWGEIADIVAA--LSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~---~~~~~~~~~~~i~~i~~~--~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+.+..+.+.|+|+|.+...-.. ... .+..++.++++++. .++||++-||| +++++.+++ ..||++|.+|+++
T Consensus 146 ~Ea~~A~~~GaDyI~vgpvf~T~tK~~~-~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~-~aGa~gvav~sai 222 (243)
T 3o63_A 146 DQVAAAAAGDADYFCVGPCWPTPTKPGR-AAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVL-DAGARRIVVVRAI 222 (243)
T ss_dssp HHHHHHHHSSCSEEEECCSSCCCC------CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHH-HTTCCCEEESHHH
T ss_pred HHHHHHhhCCCCEEEEcCccCCCCCCCc-chhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHH-HcCCCEEEEeHHH
Confidence 3366677799999999654221 111 35679999999886 58999999999 899999999 6999999999998
Q ss_pred hcCc
Q 020428 236 LWNA 239 (326)
Q Consensus 236 l~~P 239 (326)
+..+
T Consensus 223 ~~a~ 226 (243)
T 3o63_A 223 TSAD 226 (243)
T ss_dssp HTCS
T ss_pred hCCC
Confidence 8654
No 215
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=98.12 E-value=3.3e-05 Score=68.83 Aligned_cols=136 Identities=11% Similarity=0.117 Sum_probs=102.3
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
+.|+.-+=|..++-+..+ ....|+|+|=|++.+ .+++.+.++++..++ .+..+.|-+.
T Consensus 101 ~lPvLrKDfi~~~~qi~e---a~~~GAD~ilLi~a~---------------l~~~~l~~l~~~a~~-lGl~~lvEv~--- 158 (251)
T 1i4n_A 101 CRPILAKDFYIDTVQVKL---ASSVGADAILIIARI---------------LTAEQIKEIYEAAEE-LGMDSLVEVH--- 158 (251)
T ss_dssp CSCEEEECCCCSTHHHHH---HHHTTCSEEEEEGGG---------------SCHHHHHHHHHHHHT-TTCEEEEEEC---
T ss_pred CCCEEEeeCCCCHHHHHH---HHHcCCCEEEEeccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 458887777777665444 222499999998642 234678888888876 4888877773
Q ss_pred ChHHHHHHHHHHHHc-CCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 155 SSQDTVELARRIEKT-GVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~-G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
..+.++.+.+. |++.|-++.|.-.. -..|++...++.+.+ ++++|+-|||.|++|+.++. .. +|+|.|
T Consensus 159 ----~~eE~~~A~~l~g~~iIGinnr~l~t---~~~d~~~~~~l~~~ip~~~~vIaEsGI~t~edv~~~~-~~-a~avLV 229 (251)
T 1i4n_A 159 ----SREDLEKVFSVIRPKIIGINTRDLDT---FEIKKNVLWELLPLVPDDTVVVAESGIKDPRELKDLR-GK-VNAVLV 229 (251)
T ss_dssp ----SHHHHHHHHTTCCCSEEEEECBCTTT---CCBCTTHHHHHGGGSCTTSEEEEESCCCCGGGHHHHT-TT-CSEEEE
T ss_pred ----CHHHHHHHHhcCCCCEEEEeCccccc---CCCCHHHHHHHHHhCCCCCEEEEeCCCCCHHHHHHHH-Hh-CCEEEE
Confidence 23446777788 99999999986432 345788888888776 67999999999999999999 57 999999
Q ss_pred ccchhcCccc
Q 020428 232 ARGALWNASI 241 (326)
Q Consensus 232 Gr~~l~~P~l 241 (326)
|++++..++.
T Consensus 230 G~aimr~~d~ 239 (251)
T 1i4n_A 230 GTSIMKAENP 239 (251)
T ss_dssp CHHHHHCSSH
T ss_pred cHHHcCCcCH
Confidence 9999976553
No 216
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=98.12 E-value=4e-06 Score=74.02 Aligned_cols=74 Identities=11% Similarity=0.039 Sum_probs=59.9
Q ss_pred HHHHHHHHcCC-----cEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 161 ELARRIEKTGV-----SALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 161 e~a~~l~~~G~-----d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
+.++.+.+.|. ..|-+.+ +. .+.+.+.++++++.+ ++||++.|||+|++++++++ . |||+|++|++
T Consensus 149 e~~~~~a~~g~~~l~~~~Vyl~~-~G-----~~~~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~-~-gAd~VIVGSa 220 (234)
T 2f6u_A 149 ELAASYALVGEKLFNLPIIYIEY-SG-----TYGNPELVAEVKKVLDKARLFYGGGIDSREKAREML-R-YADTIIVGNV 220 (234)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEEC-TT-----SCCCHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHH-H-HSSEEEECHH
T ss_pred HHHHHHHHhhhhhcCCCEEEEeC-CC-----CcchHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHH-h-CCCEEEEChH
Confidence 55666666555 6666655 32 245799999999999 99999999999999999998 5 9999999999
Q ss_pred hhcCcccc
Q 020428 235 ALWNASIF 242 (326)
Q Consensus 235 ~l~~P~lf 242 (326)
+..+|.-+
T Consensus 221 ~v~~~~~~ 228 (234)
T 2f6u_A 221 IYEKGIDA 228 (234)
T ss_dssp HHHHCHHH
T ss_pred HHhCHHHH
Confidence 99988543
No 217
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=98.12 E-value=5.7e-06 Score=73.77 Aligned_cols=153 Identities=11% Similarity=0.139 Sum_probs=93.4
Q ss_pred cEEEEEC-C-CCHHHHHHHHHHhhc-CCCEEEEccCCCcccccccc------cccccc--CChHHHHHHHHHHhhcccCc
Q 020428 77 HVVFQMG-T-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGG------MGAALL--SKPELIHDILTMLKRNLDVP 145 (326)
Q Consensus 77 p~~vQl~-g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~------~G~~l~--~~p~~~~~iv~~v~~~~~~p 145 (326)
-++.=|. | .+++...+.++.+.+ |+|.|||.+ |.+.-..+| .--+|- -+.+.+.++++++|+. +|
T Consensus 15 ali~yitaG~P~~~~t~~~~~~l~~~GaD~iElGi--PfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~--~P 90 (252)
T 3tha_A 15 ANVAYTVLGYPNLQTSEAFLQRLDQSPIDILELGV--AYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK--KA 90 (252)
T ss_dssp EEEEEEETTSSCHHHHHHHHHTGGGSSCSEEEEEC--CCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS--SE
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC--CC
Confidence 3554442 3 467889999998877 899999976 332111111 000111 2456777888888765 67
Q ss_pred EEEEecCCCChH---HHHHHHHHHHHcCCcEEEEe-------------------------ec-ccC----------CC--
Q 020428 146 VTCKIRLLKSSQ---DTVELARRIEKTGVSALAVH-------------------------GR-KVA----------DR-- 184 (326)
Q Consensus 146 v~vK~r~g~~~~---~~~e~a~~l~~~G~d~i~vh-------------------------~r-~~~----------~~-- 184 (326)
+.+=. .+++- -...+++.+.++|+|++++- .- +.. ..
T Consensus 91 ivlm~--Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~gFi 168 (252)
T 3tha_A 91 LVFMV--YYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKGFI 168 (252)
T ss_dssp EEEEC--CHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCSCE
T ss_pred EEEEe--ccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCCeE
Confidence 65411 12211 13455666666666666541 11 100 00
Q ss_pred -------CCCcC------CHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 185 -------PRDPA------KWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 185 -------~~~~~------~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
.+|.. ..+.++++++..++||+..+||.|++++.++. . +||||.||++++.
T Consensus 169 Y~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~-~-~ADGVIVGSAiVk 232 (252)
T 3tha_A 169 YLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMR-K-VADGVIVGTSIVK 232 (252)
T ss_dssp EEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHT-T-TSSEEEECHHHHH
T ss_pred EEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHH-h-cCCEEEECHHHHH
Confidence 11211 13567888888899999999999999999887 3 6999999999874
No 218
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=98.11 E-value=1.6e-05 Score=70.76 Aligned_cols=144 Identities=15% Similarity=0.127 Sum_probs=100.1
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCC--EEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVA--AIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d--~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~ 152 (326)
.+..+|...|...+.+..+.+.+ |+| .+|+=-|.=+|+. .+| .++++++|+.+ +.|+.+.+-.
T Consensus 29 ~i~pSilsaD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpni---t~G----------~~~v~~lr~~~p~~~ldvHLmv 95 (246)
T 3inp_A 29 QINPSILSADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNL---TFG----------PMVLKALRDYGITAGMDVHLMV 95 (246)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB---CCC----------HHHHHHHHHHTCCSCEEEEEEC
T ss_pred eeehhhhcCChhhHHHHHHHHHHcCCCEEEEEecCCCcCcch---hcC----------HHHHHHHHHhCCCCeEEEEEee
Confidence 57788888898888888888876 777 5566444322221 122 25688888887 8999998864
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccC---------------------------------------------CCCCC
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVA---------------------------------------------DRPRD 187 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~---------------------------------------------~~~~~ 187 (326)
. ++..+++.+.++|+|.|++|.-... .+..|
T Consensus 96 ~----~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G~k~Gvalnp~Tp~e~l~~~l~~vD~VlvMsV~PGfgG 171 (246)
T 3inp_A 96 K----PVDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFGG 171 (246)
T ss_dssp S----SCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTTSEEEEEECTTCCSGGGTTTGGGCSEEEEECSCTTC--
T ss_pred C----CHHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHhcCCEEEEeeecCCCCC
Confidence 2 2234677788999999999853210 01111
Q ss_pred ----cCCHHHHHHHHHh-----cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 188 ----PAKWGEIADIVAA-----LSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 188 ----~~~~~~i~~i~~~-----~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+..++-++++++. .+++|.+-|||+ ++.+..+. +.|||.+++||++...+
T Consensus 172 Q~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~-~~ti~~~~-~aGAD~~V~GSaIf~a~ 230 (246)
T 3inp_A 172 QKFIPAMLDKAKEISKWISSTDRDILLEIDGGVN-PYNIAEIA-VCGVNAFVAGSAIFNSD 230 (246)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCC-TTTHHHHH-TTTCCEEEESHHHHTSS
T ss_pred cccchHHHHHHHHHHHHHHhcCCCeeEEEECCcC-HHHHHHHH-HcCCCEEEEehHHhCCC
Confidence 3345667776654 358999999998 68898888 69999999999976543
No 219
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=98.10 E-value=1.9e-06 Score=77.47 Aligned_cols=78 Identities=9% Similarity=-0.029 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.++.++|+.+++.|++.+++-.-+. .+.+.++++++.+++||...|||++. ++++++ .||+-|.+|++++
T Consensus 38 ~dp~~~A~~~~~~Ga~~l~vvDL~~-------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l--~Ga~~Viigs~a~ 107 (260)
T 2agk_A 38 HPSSYYAKLYKDRDVQGCHVIKLGP-------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL--KWASKVIVTSWLF 107 (260)
T ss_dssp CCHHHHHHHHHHTTCTTCEEEEESS-------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT--TTCSCEEECGGGB
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCC-------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh--cCCCEEEECcHHH
Confidence 3678999999999999999866653 57899999999999999999999987 999999 8999999999999
Q ss_pred cC-----cccccc
Q 020428 237 WN-----ASIFSS 244 (326)
Q Consensus 237 ~~-----P~lf~~ 244 (326)
.| |.++.+
T Consensus 108 ~~~g~~~p~~~~~ 120 (260)
T 2agk_A 108 TKEGHFQLKRLER 120 (260)
T ss_dssp CTTCCBCHHHHHH
T ss_pred hhcCCCCHHHHHH
Confidence 99 766554
No 220
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=98.09 E-value=4e-05 Score=73.31 Aligned_cols=125 Identities=14% Similarity=0.185 Sum_probs=94.8
Q ss_pred HhhcCCCEEEEccCCCccccccccccccc-cCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCc
Q 020428 96 MVCKDVAAIDINMGCPKSFSVSGGMGAAL-LSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVS 172 (326)
Q Consensus 96 ~~~~~~d~idlN~gcP~~~~~~~~~G~~l-~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d 172 (326)
.+++||..+-++...+.. ...|... -.+++...+.++++|+++ ++++.+...-+|+.++++++++.+++.|++
T Consensus 167 ~~~~G~~~~K~~~~~~~~----~K~G~~~~~~~~~~d~e~v~avR~a~g~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 242 (410)
T 3dip_A 167 LVAEGYAAMKIWPFDDFA----SITPHHISLTDLKDGLEPFRKIRAAVGQRIEIMCELHSLWGTHAAARICNALADYGVL 242 (410)
T ss_dssp HHHTTCSEEEECTTHHHH----TTCTTCCCHHHHHHHHHHHHHHHHHHTTSSEEEEECTTCBCHHHHHHHHHHGGGGTCS
T ss_pred HHHcCCCEEEECCccCcc----ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 344599999986211110 0112111 123556778899999987 578888888889999999999999999999
Q ss_pred EEEEeecccCCCC-CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 173 ALAVHGRKVADRP-RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 173 ~i~vh~r~~~~~~-~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|. + + ..+.+++..+++++.+++||++.+.+.+++++.++++...+|.|++-
T Consensus 243 ~iE-------q-P~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k 295 (410)
T 3dip_A 243 WVE-------D-PIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLD 295 (410)
T ss_dssp EEE-------C-CBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred EEE-------C-CCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeec
Confidence 985 1 2 23448999999999999999999999999999999976668998875
No 221
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=98.06 E-value=4.6e-05 Score=69.72 Aligned_cols=204 Identities=15% Similarity=0.084 Sum_probs=127.9
Q ss_pred eEEccccCCCCHHHHHHHHHcCCCeEEeCc-eecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-CC
Q 020428 7 LVLAPMVRVGTLPFRLLAAQYGADITYGEE-IIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-GT 84 (326)
Q Consensus 7 iilAPM~g~t~~~fr~~~~~~G~~l~~te~-i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~g 84 (326)
.+..| +.-|..+.+++.+.|.+.+++.- ..+..+.+ .+.+...+.+. ....-......+.|+++-+ +|
T Consensus 30 ~i~~~--~ayD~~sA~l~e~aG~dai~vs~~s~a~~~G~------pD~~~vt~~em--~~~~~~I~r~~~~pviaD~d~G 99 (305)
T 3ih1_A 30 ILQIP--GAHDAMAALVARNTGFLALYLSGAAYTASKGL------PDLGIVTSTEV--AERARDLVRATDLPVLVDIDTG 99 (305)
T ss_dssp CEEEE--BCSSHHHHHHHHHTTCSCEEECHHHHHHHHTC------CSSSCSCHHHH--HHHHHHHHHHHCCCEEEECTTC
T ss_pred cEEEe--cCcCHHHHHHHHHcCCCEEEECcHHHHHhCCC------CCCCcCCHHHH--HHHHHHHHHhcCCCEEEECCCC
Confidence 44434 66789999999999998777653 21111111 11111110000 0000011112235888887 44
Q ss_pred -CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC----CChHH
Q 020428 85 -SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL----KSSQD 158 (326)
Q Consensus 85 -~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g----~~~~~ 158 (326)
.+++...+.++.+.+ |+.+|.|--+.. ++.+..-.|.. +-..+...+-|++++++ +.++.+--|.. ...++
T Consensus 100 yg~~~~v~~~v~~l~~aGaagv~iED~~~-~krcGh~~gk~-l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ 176 (305)
T 3ih1_A 100 FGGVLNVARTAVEMVEAKVAAVQIEDQQL-PKKCGHLNGKK-LVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDE 176 (305)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEECBCS-SCCTTCTTCCC-BCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEECCCCC-CcccCCCCCCc-ccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHH
Confidence 358888888888776 999999986642 22222222333 44566666667777776 67777666653 23568
Q ss_pred HHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe---CC---CCCHHHHHHHHHhcCCcEEEec
Q 020428 159 TVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN---GD---VFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n---Gg---I~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++-++.++++|+|.|.+++. .+.+.++++.+.+++|+++| || ..|.+ ++- ..|+..|..|
T Consensus 177 ai~Ra~ay~eAGAD~i~~e~~---------~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~---eL~-~lGv~~v~~~ 243 (305)
T 3ih1_A 177 AIERANAYVKAGADAIFPEAL---------QSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAE---EFA-NMGFQMVIYP 243 (305)
T ss_dssp HHHHHHHHHHHTCSEEEETTC---------CSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHH---HHH-HTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHH---HHH-HcCCCEEEEc
Confidence 999999999999999999875 25788999999999999876 33 34444 344 6899999988
Q ss_pred cchh
Q 020428 233 RGAL 236 (326)
Q Consensus 233 r~~l 236 (326)
-.++
T Consensus 244 ~~~~ 247 (305)
T 3ih1_A 244 VTSL 247 (305)
T ss_dssp SHHH
T ss_pred hHHH
Confidence 5543
No 222
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=98.02 E-value=2.1e-05 Score=69.23 Aligned_cols=69 Identities=6% Similarity=0.011 Sum_probs=58.4
Q ss_pred cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccccc
Q 020428 169 TGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSSQ 245 (326)
Q Consensus 169 ~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~~ 245 (326)
.|...|-+-. +.. +.+.+.++++++.+ ++||+..|||+|+++++++. . |||+|++|+++..||..+.+.
T Consensus 158 ~g~~~vY~e~-sG~-----~g~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~-~-gAD~VVVGSai~~~~~~~~e~ 227 (235)
T 3w01_A 158 YRLPVMYIEY-SGI-----YGDVSKVQAVSEHLTETQLFYGGGISSEQQATEMA-A-IADTIIVGDIIYKDIKKALKT 227 (235)
T ss_dssp TCCSEEEEEC-TTS-----CCCHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHH-T-TSSEEEECTHHHHCHHHHHHT
T ss_pred cCCCEEEEec-CCC-----cCCHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHH-c-CCCEEEECCceecCHHHHHHH
Confidence 5777877755 321 23789999999998 99999999999999999988 4 999999999999999887764
No 223
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=98.00 E-value=4.8e-05 Score=69.38 Aligned_cols=199 Identities=14% Similarity=0.109 Sum_probs=121.5
Q ss_pred CCCCHHHHHHHHHcCCCeEEeCcee-c-ccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-CC-CCHHH
Q 020428 14 RVGTLPFRLLAAQYGADITYGEEII-D-HKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-GT-SDAVR 89 (326)
Q Consensus 14 g~t~~~fr~~~~~~G~~l~~te~i~-~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~g-~~~~~ 89 (326)
+.-|..+.+++.+.|.+.+++.-.+ + ..+.+ .+.+...+.+. ....-......+.|+++-+ +| .+++.
T Consensus 28 ~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~------pD~~~vt~~em--~~~~~~I~r~~~~PviaD~d~Gyg~~~~ 99 (298)
T 3eoo_A 28 GAITAYAAKMAEAVGFKAVYLSGGGVAANSLGI------PDLGISTMDDV--LVDANRITNATNLPLLVDIDTGWGGAFN 99 (298)
T ss_dssp ECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCC------CSSSCCCHHHH--HHHHHHHHHHCCSCEEEECTTCSSSHHH
T ss_pred cCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCC------CCCCCCCHHHH--HHHHHHHHhhcCCeEEEECCCCCCCHHH
Confidence 6668999999999999877765311 1 11111 11111100000 0000111122346888887 33 38888
Q ss_pred HHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc-ccCcEEEEecCC----CChHHHHHHH
Q 020428 90 ALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN-LDVPVTCKIRLL----KSSQDTVELA 163 (326)
Q Consensus 90 ~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~-~~~pv~vK~r~g----~~~~~~~e~a 163 (326)
..+.++.+.+ |+.+|.|--+.. ++.+..-.|..|....+.+.. +++.+++ .+.++.+--|.. ...+++++-+
T Consensus 100 v~~~v~~l~~aGaagv~iEDq~~-~k~cGh~~gk~l~~~~e~~~r-i~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra 177 (298)
T 3eoo_A 100 IARTIRSFIKAGVGAVHLEDQVG-QKRCGHRPGKECVPAGEMVDR-IKAAVDARTDETFVIMARTDAAAAEGIDAAIERA 177 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEECBCC-CCCTTCCCCCCBCCHHHHHHH-HHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCeEEEECCCCC-CcccCCCCCCeecCHHHHHHH-HHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHH
Confidence 8888888776 999999976542 222222223344443344444 4444443 356666666653 1246788999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe---CC---CCCHHHHHHHHHhcCCcEEEeccch
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN---GD---VFEYDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n---Gg---I~s~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+.+.++|+|.|-+++. .+.+.++++.+.+++||.+| || ..|.+ ++- +.|+..|..|-.+
T Consensus 178 ~ay~~AGAD~if~~~~---------~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~---eL~-~lGv~~v~~~~~~ 242 (298)
T 3eoo_A 178 IAYVEAGADMIFPEAM---------KTLDDYRRFKEAVKVPILANLTEFGSTPLFTLD---ELK-GANVDIALYCCGA 242 (298)
T ss_dssp HHHHHTTCSEEEECCC---------CSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHH---HHH-HTTCCEEEECSHH
T ss_pred HhhHhcCCCEEEeCCC---------CCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHH---HHH-HcCCeEEEEchHH
Confidence 9999999999999875 25788999999999999876 33 23433 444 6899999988553
No 224
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=98.00 E-value=0.00012 Score=66.73 Aligned_cols=95 Identities=14% Similarity=0.139 Sum_probs=64.4
Q ss_pred HHHHHHHhhcccCcEEEEecCC----CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE
Q 020428 132 HDILTMLKRNLDVPVTCKIRLL----KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA 207 (326)
Q Consensus 132 ~~iv~~v~~~~~~pv~vK~r~g----~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~ 207 (326)
.+++++..+ .++|+.+=...| .+++.....++...+.|+|+|-+. |.+ +.++++.+.+++||++
T Consensus 161 ~~v~~~a~~-~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~-------~t~----e~~~~vv~~~~vPVv~ 228 (295)
T 3glc_A 161 IQLVDAGMK-VGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY-------YVE----KGFERIVAGCPVPIVI 228 (295)
T ss_dssp HHHHHHHHT-TTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE-------CCT----TTHHHHHHTCSSCEEE
T ss_pred HHHHHHHHH-cCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC-------CCH----HHHHHHHHhCCCcEEE
Confidence 344444433 278887743222 233334558889999999998776 111 2357788888999999
Q ss_pred eCCCCC-HHH----HHHHHHhcCCcEEEeccchhcCc
Q 020428 208 NGDVFE-YDD----FQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 208 nGgI~s-~~d----~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
.||+.+ .++ +..++ ..||+|+.+||.++..|
T Consensus 229 ~GG~~~~~~~~l~~v~~ai-~aGA~Gv~vGRnI~q~~ 264 (295)
T 3glc_A 229 AGGKKLPEREALEMCWQAI-DQGASGVDMGRNIFQSD 264 (295)
T ss_dssp ECCSCCCHHHHHHHHHHHH-HTTCSEEEESHHHHTSS
T ss_pred EECCCCCHHHHHHHHHHHH-HhCCeEEEeHHHHhcCc
Confidence 999984 444 44555 47999999999988654
No 225
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=98.00 E-value=0.00025 Score=64.44 Aligned_cols=201 Identities=14% Similarity=0.085 Sum_probs=122.2
Q ss_pred cCCCCHHHHHHHHHcCCCeEEeCc--eecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-CC-CCHH
Q 020428 13 VRVGTLPFRLLAAQYGADITYGEE--IIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-GT-SDAV 88 (326)
Q Consensus 13 ~g~t~~~fr~~~~~~G~~l~~te~--i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~g-~~~~ 88 (326)
.+.-|....+++.+.|.+.+++.- ++.. +.+ .+.+...+.+. ....-......+.|+++-+ +| .+++
T Consensus 20 ~~a~D~~sA~~~~~aG~~ai~vs~~~~a~~-~G~------pD~~~vt~~em--~~~~~~I~~~~~~PviaD~d~Gyg~~~ 90 (290)
T 2hjp_A 20 MAAHNPLVAKLAEQAGFGGIWGSGFELSAS-YAV------PDANILSMSTH--LEMMRAIASTVSIPLIADIDTGFGNAV 90 (290)
T ss_dssp EECSSHHHHHHHHHHTCSEEEECHHHHHHH-TTS------CTTTCSCHHHH--HHHHHHHHTTCSSCEEEECTTTTSSHH
T ss_pred ecCCCHHHHHHHHHcCCCEEEEChHHHHHh-CCC------CCCCCCCHHHH--HHHHHHHHhcCCCCEEEECCCCCCCHH
Confidence 467799999999999999888662 2211 222 11111110000 0000111223346888887 33 2888
Q ss_pred HHHHHHHHhhc-CCCEEEEccCCCcccccccccc--ccccCChHHHHHHHHHHhhcc-cCcEEEEecCC-----CChHHH
Q 020428 89 RALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMG--AALLSKPELIHDILTMLKRNL-DVPVTCKIRLL-----KSSQDT 159 (326)
Q Consensus 89 ~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G--~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g-----~~~~~~ 159 (326)
...+.++.+.+ |+.+|.|--+.. ++++.. .| +.-+...+...+-|++++++- ..++.+--|.. ...+++
T Consensus 91 ~~~~~v~~l~~aGa~gv~iED~~~-~k~cgH-~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~a 168 (290)
T 2hjp_A 91 NVHYVVPQYEAAGASAIVMEDKTF-PKDTSL-RTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLGQQEA 168 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBCS-SCCC--------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCCHHHH
T ss_pred HHHHHHHHHHHhCCeEEEEcCCCC-Cccccc-cccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhccccHHHH
Confidence 88888888776 999999986642 222222 22 233344544455556555542 33444444442 225789
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC--CcEEEe---CCCCCHHHHHHHHHhcC-CcEEEecc
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS--IPVIAN---GDVFEYDDFQRIKTAAG-ASSVMAAR 233 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~--iPVi~n---GgI~s~~d~~~~l~~~G-ad~VmiGr 233 (326)
++-++.++++|+|.|.++++. .+.+.++++.+.++ +|+++| +...|.+ ++- +.| +..|..|-
T Consensus 169 i~Ra~ay~eAGAd~i~~e~~~--------~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~---eL~-~lG~v~~v~~~~ 236 (290)
T 2hjp_A 169 VRRGQAYEEAGADAILIHSRQ--------KTPDEILAFVKSWPGKVPLVLVPTAYPQLTEA---DIA-ALSKVGIVIYGN 236 (290)
T ss_dssp HHHHHHHHHTTCSEEEECCCC--------SSSHHHHHHHHHCCCSSCEEECGGGCTTSCHH---HHH-TCTTEEEEEECS
T ss_pred HHHHHHHHHcCCcEEEeCCCC--------CCHHHHHHHHHHcCCCCCEEEeccCCCCCCHH---HHH-hcCCeeEEEech
Confidence 999999999999999998742 24577899999998 999987 3334443 444 689 99999886
Q ss_pred chh
Q 020428 234 GAL 236 (326)
Q Consensus 234 ~~l 236 (326)
.++
T Consensus 237 ~~~ 239 (290)
T 2hjp_A 237 HAI 239 (290)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 226
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=97.99 E-value=4.7e-05 Score=68.13 Aligned_cols=123 Identities=11% Similarity=0.070 Sum_probs=84.1
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhccc-CcEEEEecC--C-CChHH-HHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLD-VPVTCKIRL--L-KSSQD-TVELA 163 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~-~pv~vK~r~--g-~~~~~-~~e~a 163 (326)
...++...+..|+|.||+-+ .+|..+-.+.+.+.+-+.++++.++ .+..+|.=+ + .+.++ ....+
T Consensus 87 Kv~E~~~Av~~GAdEIDmVi----------nig~l~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L~d~e~i~~a~ 156 (260)
T 1p1x_A 87 ALAETRAAIAYGADEVDVVF----------PYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKAS 156 (260)
T ss_dssp HHHHHHHHHHHTCSEEEEEC----------CHHHHHTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHHCSHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEec----------cHHhhhCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccCCcHHHHHHHH
Confidence 44555555656999999864 3555556677888888888888773 233445433 2 22334 56888
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh-------cCCcEEEeCCCCCHHHHHHHHHhcCC
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA-------LSIPVIANGDVFEYDDFQRIKTAAGA 226 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~-------~~iPVi~nGgI~s~~d~~~~l~~~Ga 226 (326)
+...++|+|+|-.+ .+...+.+..+.++.+++. .++||-++|||+|.+|+.++++ .|+
T Consensus 157 ~ia~eaGADfVKTS----TGf~~~gAt~e~v~lm~~~I~~~~~g~~v~VKaaGGIrt~~~al~~i~-aga 221 (260)
T 1p1x_A 157 EISIKAGADFIKTS----TGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLA-IAD 221 (260)
T ss_dssp HHHHHTTCSEEECC----CSCSSCCCCHHHHHHHHHHHHHHTCTTTCEEECBSSCCSHHHHHHHHH-HHH
T ss_pred HHHHHhCCCEEEeC----CCCCCCCCCHHHHHHHHHHHHHhcCCCCceEEEeCCCCCHHHHHHHHH-hhh
Confidence 99999999999443 2233355677755555544 3699999999999999999994 443
No 227
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=97.98 E-value=6.5e-05 Score=67.82 Aligned_cols=123 Identities=11% Similarity=0.074 Sum_probs=81.5
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChH---HHHHHHHHHhhcccCcEEEEecC--C--CChHHHHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPE---LIHDILTMLKRNLDVPVTCKIRL--L--KSSQDTVE 161 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~---~~~~iv~~v~~~~~~pv~vK~r~--g--~~~~~~~e 161 (326)
...++...++.|+|.||+-+ .+|..+-.+.+ .+.+-+.++++.++ +..+|.=+ + .+.+....
T Consensus 108 Kv~E~~~Av~~GAdEIDmVi----------nig~lksg~~~~~~~v~~eI~~v~~a~~-~~~lKVIlEt~~L~d~e~i~~ 176 (281)
T 2a4a_A 108 VLNDTEKALDDGADEIDLVI----------NYKKIIENTDEGLKEATKLTQSVKKLLT-NKILKVIIEVGELKTEDLIIK 176 (281)
T ss_dssp HHHHHHHHHHHTCSEEEEEC----------CHHHHHHSHHHHHHHHHHHHHHHHTTCT-TSEEEEECCHHHHCSHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEec----------chHhhhCCChhHHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHH
Confidence 44555555656999999864 35555555667 88888899988874 23445443 2 23333568
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh------------cCCcEEEeCCCCCHHHHHHHHHhcCCc
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA------------LSIPVIANGDVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~------------~~iPVi~nGgI~s~~d~~~~l~~~Gad 227 (326)
.++...++|+|+|-.. .+...+.+..+.++.+++. .+++|-++|||+|.+|+.++++ .|++
T Consensus 177 A~~ia~eaGADfVKTS----TGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaGGIrt~e~al~~i~-aga~ 249 (281)
T 2a4a_A 177 TTLAVLNGNADFIKTS----TGKVQINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSGGISDLNTASHYIL-LARR 249 (281)
T ss_dssp HHHHHHTTTCSEEECC----CSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEESSCCSHHHHHHHHH-HHHH
T ss_pred HHHHHHHhCCCEEEeC----CCCCCCCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeCCCCCHHHHHHHHH-Hhhh
Confidence 8899999999999543 2222244445544433332 3699999999999999999994 5443
No 228
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=97.98 E-value=6.8e-05 Score=71.48 Aligned_cols=128 Identities=9% Similarity=0.070 Sum_probs=95.9
Q ss_pred HHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCc
Q 020428 95 KMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVS 172 (326)
Q Consensus 95 ~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d 172 (326)
+.+.+||..+-+..|-|... ....|..-..+++...+.++++|+++ ++++.+...-+|+.++++++++.+++.|++
T Consensus 162 ~~~~~G~~~~Kik~g~~~~~--~~~~g~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~~i~ 239 (400)
T 4dxk_A 162 SLLEDGITAMKIWPFDAAAE--KTRGQYISMPDLKSALEPFEKIRKAVGDKMDIMVEFHSMWQLLPAMQIAKALTPYQTF 239 (400)
T ss_dssp HHHHTTCCEEEECTTHHHHH--HHTTSCCCHHHHHHHHHHHHHHHHHHGGGSEEEEECTTCBCHHHHHHHHHHTGGGCCS
T ss_pred HHHHhCCCEEEEcCCCcccc--ccccCcCCHHHHHHHHHHHHHHHHHcCCCceEEEECCCCCCHHHHHHHHHHHhhcCCC
Confidence 34445999999876522110 00011001123566788899999987 578888888889999999999999999999
Q ss_pred EEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 173 ALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 173 ~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+|. + +..+.+++..+++++.+++||++.+.+.+++++.++++...+|.|++-
T Consensus 240 ~iE-------e-P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d 291 (400)
T 4dxk_A 240 WHE-------D-PIKMDSLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLD 291 (400)
T ss_dssp EEE-------C-CBCTTSGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEEC
T ss_pred EEE-------c-CCCcccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 986 1 223457888999999999999999999999999999965558988875
No 229
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.95 E-value=1.2e-05 Score=79.85 Aligned_cols=82 Identities=15% Similarity=0.215 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCC--CCCcCCHHHHHHHHHhcCCcEEEeCCCCCH-----------HHHHHHHHh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADR--PRDPAKWGEIADIVAALSIPVIANGDVFEY-----------DDFQRIKTA 223 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~--~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~-----------~d~~~~l~~ 223 (326)
.++.++|+.+++.|+++|++...+.... ...+.+.+.++++++.+++||++.|||++. +++.+++ .
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l-~ 358 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYF-R 358 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHH-H
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHH-H
Confidence 4789999999999999999887665321 112335888999999999999999999998 5599999 6
Q ss_pred cCCcEEEeccchhcCc
Q 020428 224 AGASSVMAARGALWNA 239 (326)
Q Consensus 224 ~Gad~VmiGr~~l~~P 239 (326)
.|||.|.||++++.||
T Consensus 359 aGad~V~igt~~~~~~ 374 (555)
T 1jvn_A 359 SGADKVSIGTDAVYAA 374 (555)
T ss_dssp HTCSEEEECHHHHHHH
T ss_pred cCCCEEEECCHHhhCc
Confidence 8999999999998753
No 230
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=97.95 E-value=2.2e-05 Score=69.32 Aligned_cols=143 Identities=14% Similarity=0.207 Sum_probs=96.1
Q ss_pred EEEEECCCCHHHHHHHHHHhhcCCCE--EEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCC
Q 020428 78 VVFQMGTSDAVRALTAAKMVCKDVAA--IDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKS 155 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~~~d~--idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~ 155 (326)
+..+|...|...+.+..+.+..|+|. +|+=-|.=.++. .+| ..+++++++.++.|+.+-+-.. +
T Consensus 3 i~pSila~D~~~l~~~i~~~~~gad~lHvDvmDG~fvpn~---t~G----------~~~v~~lr~~~~~~~dvhLmv~-d 68 (231)
T 3ctl_A 3 ISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNL---TLS----------PFFVSQVKKLATKPLDCHLMVT-R 68 (231)
T ss_dssp EEEBGGGSCGGGHHHHHHHHHTTCSCEEEEEECSSSSSCC---CBC----------HHHHHHHHTTCCSCEEEEEESS-C
T ss_pred EEeehhhCChhhHHHHHHHHHcCCCEEEEEEEeCccCccc---hhc----------HHHHHHHHhccCCcEEEEEEec-C
Confidence 45677778887888888888448885 565445412221 122 2468888888788888776542 3
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeecc-cC---------------------------------------------CCCC---
Q 020428 156 SQDTVELARRIEKTGVSALAVHGRK-VA---------------------------------------------DRPR--- 186 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r~-~~---------------------------------------------~~~~--- 186 (326)
+ ..+++.+.++|+|.|++|.-. .. .++.
T Consensus 69 p---~~~i~~~~~aGAd~itvh~Ea~~~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D~VlvmsV~pGfggQ~ 145 (231)
T 3ctl_A 69 P---QDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQP 145 (231)
T ss_dssp G---GGTHHHHHHHTCSEEEECGGGCTTTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCSEEEEESSCTTCSSCC
T ss_pred H---HHHHHHHHHcCCCEEEECcccCCccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCCEEEEeeeccCcCCcc
Confidence 3 335678888899999988655 21 0001
Q ss_pred -CcCCHHHHHHHHHhc-----CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec-cchhcCc
Q 020428 187 -DPAKWGEIADIVAAL-----SIPVIANGDVFEYDDFQRIKTAAGASSVMAA-RGALWNA 239 (326)
Q Consensus 187 -~~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG-r~~l~~P 239 (326)
.+..++-++++++.. +++|.+-|||+ .+.+..+. ..|||.+++| |+++..+
T Consensus 146 f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~-~~~~~~~~-~aGAd~~V~G~saif~~~ 203 (231)
T 3ctl_A 146 FIPEMLDKLAELKAWREREGLEYEIEVDGSCN-QATYEKLM-AAGADVFIVGTSGLFNHA 203 (231)
T ss_dssp CCTTHHHHHHHHHHHHHHHTCCCEEEEESCCS-TTTHHHHH-HHTCCEEEECTTTTGGGC
T ss_pred ccHHHHHHHHHHHHHHhccCCCceEEEECCcC-HHHHHHHH-HcCCCEEEEccHHHhCCC
Confidence 123356666666654 68999999997 67788888 6899999999 9866533
No 231
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=97.91 E-value=0.00015 Score=65.43 Aligned_cols=196 Identities=13% Similarity=0.035 Sum_probs=127.4
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeC-ceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-C--CCCH
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGE-EIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-G--TSDA 87 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te-~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~--g~~~ 87 (326)
|.+.-|....+++.+.|.+.+++. ...+..+.+ .+.....+.+. ....-......+.|+++-+ + |.++
T Consensus 20 ~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~~G~------pD~~~vt~~em--~~~~~~I~~~~~~pviaD~d~Gyg~~~ 91 (275)
T 2ze3_A 20 LPNAWDVASARLLEAAGFTAIGTTSAGIAHARGR------TDGQTLTRDEM--GREVEAIVRAVAIPVNADIEAGYGHAP 91 (275)
T ss_dssp ECEESSHHHHHHHHHHTCSCEEECHHHHHHHSCC------CSSSSSCHHHH--HHHHHHHHHHCSSCEEEECTTCSSSSH
T ss_pred EecccCHHHHHHHHHcCCCEEEECcHHHHHhCCC------CCCCCCCHHHH--HHHHHHHHhhcCCCEEeecCCCCCCCH
Confidence 346679999999999999888765 211112211 11111110000 0000111112235899888 3 4679
Q ss_pred HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecCCC---------
Q 020428 88 VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRLLK--------- 154 (326)
Q Consensus 88 ~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~g~--------- 154 (326)
+...+.++.+.+ |+.+|.|--+... .| .-+-..+...+-|++++++. ++|+.+.-|..-
T Consensus 92 ~~~~~~v~~l~~aGaagv~iED~~~~-------~~-k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~ 163 (275)
T 2ze3_A 92 EDVRRTVEHFAALGVAGVNLEDATGL-------TP-TELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATD 163 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECBCSS-------SS-SCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSH
T ss_pred HHHHHHHHHHHHcCCcEEEECCCcCC-------CC-CccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccc
Confidence 888888888776 9999999866431 12 23446666667777776653 688888777632
Q ss_pred --ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeC--CCCCHHHHHHHHHhcCCcEEE
Q 020428 155 --SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANG--DVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 155 --~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nG--gI~s~~d~~~~l~~~Gad~Vm 230 (326)
..+++++-++.++++|+|.|.+++. .+.+.++++.+.+++|+-.++ +..|.+ ++- +.|+..|.
T Consensus 164 ~~~~~~ai~Ra~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~n~~~~~~~~~~~---eL~-~lGv~~v~ 230 (275)
T 2ze3_A 164 EERLAETVRRGQAYADAGADGIFVPLA---------LQSQDIRALADALRVPLNVMAFPGSPVPR---ALL-DAGAARVS 230 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEECTTC---------CCHHHHHHHHHHCSSCEEEECCTTSCCHH---HHH-HTTCSEEE
T ss_pred hhhHHHHHHHHHHHHHCCCCEEEECCC---------CCHHHHHHHHHhcCCCEEEecCCCCCCHH---HHH-HcCCcEEE
Confidence 2467889999999999999999764 356889999999999987764 455553 444 68999999
Q ss_pred eccchh
Q 020428 231 AARGAL 236 (326)
Q Consensus 231 iGr~~l 236 (326)
.|-.++
T Consensus 231 ~~~~~~ 236 (275)
T 2ze3_A 231 FGQSLM 236 (275)
T ss_dssp CTTHHH
T ss_pred EChHHH
Confidence 885543
No 232
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=97.89 E-value=0.00025 Score=68.29 Aligned_cols=136 Identities=10% Similarity=0.174 Sum_probs=103.7
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
..|+.-+=|..++-+..+ ....|+|.|=|++.+ .+++.+.++++..++ .+..+.+-+.
T Consensus 108 ~lPvLrKDFI~d~~Qi~e---a~~~GAD~ILLi~a~---------------l~~~~l~~l~~~a~~-lgm~~LvEvh--- 165 (452)
T 1pii_A 108 PQPILCKDFIIDPYQIYL---ARYYQADACLLMLSV---------------LDDDQYRQLAAVAHS-LEMGVLTEVS--- 165 (452)
T ss_dssp CSCEEEESCCCSHHHHHH---HHHTTCSEEEEETTT---------------CCHHHHHHHHHHHHH-TTCEEEEEEC---
T ss_pred CCCeEEEeccCCHHHHHH---HHHcCCCEEEEEccc---------------CCHHHHHHHHHHHHH-cCCeEEEEeC---
Confidence 457776667777665444 222489999998753 124678888888877 4888888773
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.+.++.+.++|++.|-+..|.-.. -..|++...++.+.+ ++++|+-|||.|++|+.++. .. +|+|.||
T Consensus 166 ----~~eE~~~A~~lga~iIGinnr~L~t---~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~-~~-a~avLVG 236 (452)
T 1pii_A 166 ----NEEEQERAIALGAKVVGINNRDLRD---LSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELS-HF-ANGFLIG 236 (452)
T ss_dssp ----SHHHHHHHHHTTCSEEEEESEETTT---TEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHT-TT-CSEEEEC
T ss_pred ----CHHHHHHHHHCCCCEEEEeCCCCCC---CCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHH-Hh-CCEEEEc
Confidence 3455677778999999999986542 356888888888876 68999999999999999999 57 9999999
Q ss_pred cchhcCccc
Q 020428 233 RGALWNASI 241 (326)
Q Consensus 233 r~~l~~P~l 241 (326)
.+++..++.
T Consensus 237 ealmr~~d~ 245 (452)
T 1pii_A 237 SALMAHDDL 245 (452)
T ss_dssp HHHHTCSCH
T ss_pred HHHcCCcCH
Confidence 999986654
No 233
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.87 E-value=2.4e-05 Score=76.48 Aligned_cols=96 Identities=18% Similarity=0.147 Sum_probs=61.9
Q ss_pred HHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCC-------CCCCcCC---HHHHHHHHHhcC
Q 020428 133 DILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVAD-------RPRDPAK---WGEIADIVAALS 202 (326)
Q Consensus 133 ~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~-------~~~~~~~---~~~i~~i~~~~~ 202 (326)
+.++.+++.+++|+.+|-=. + .+-++.+. |+|.|.+ |..... ...+.+. +..++++.+.++
T Consensus 258 ~~I~~l~~~~~vpvi~k~v~--~----~~~a~~l~--G~d~v~v-g~g~g~~~~~r~~~~~g~~~~~~l~~~~~~~~~~~ 328 (486)
T 2cu0_A 258 KSMKEMRQKVDADFIVGNIA--N----PKAVDDLT--FADAVKV-GIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYG 328 (486)
T ss_dssp HHHHHHHHTCCSEEEEEEEC--C----HHHHTTCT--TSSEEEE-CSSCSTTBCHHHHTCCCCCHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHhCCccccCCcC--C----HHHHHHhh--CCCeEEE-eeeeccceeeeEEeecCcchHHHHHHHHHHHHHcC
Confidence 34455555556666655321 1 22334444 9999998 332111 0011122 233455666678
Q ss_pred CcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcC
Q 020428 203 IPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 203 iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+|||+.|||.+..|+.+++ ..|||+||+|+.++..
T Consensus 329 vpVia~GGi~~~~di~kal-alGA~~v~~g~~~~~~ 363 (486)
T 2cu0_A 329 LYVIADGGIRYSGDIVKAI-AAGADAVMLGNLLAGT 363 (486)
T ss_dssp CEEEEESCCCSHHHHHHHH-HTTCSEEEESTTTTTB
T ss_pred CcEEecCCCCCHHHHHHHH-HcCCCceeeChhhhcC
Confidence 9999999999999999999 5999999999999853
No 234
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=97.86 E-value=0.00013 Score=65.83 Aligned_cols=119 Identities=18% Similarity=0.101 Sum_probs=81.9
Q ss_pred HHHHHHHHhhcCCCEEEEccCCCcccccccccccccc---CChHHHHHHHHHHhhcccCcEEEEecC--C-CChHH-HHH
Q 020428 89 RALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALL---SKPELIHDILTMLKRNLDVPVTCKIRL--L-KSSQD-TVE 161 (326)
Q Consensus 89 ~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~---~~p~~~~~iv~~v~~~~~~pv~vK~r~--g-~~~~~-~~e 161 (326)
...++...++.|+|.||+=+ .+|..+. .+.+.+.+-+++++++++ +..+|.=+ + .+.++ ...
T Consensus 102 K~~Ea~~Av~~GAdEIDmVi----------nig~lk~~~~g~~~~V~~eI~~v~~a~~-~~~lKVIlEt~~Lt~~e~i~~ 170 (297)
T 4eiv_A 102 VSLEAVGALKDGADEIECLI----------DWRRMNENVADGESRIRLLVSEVKKVVG-PKTLKVVLSGGELQGGDIISR 170 (297)
T ss_dssp HHHHHHHHHHTTCSEEEEEC----------CTHHHHHCHHHHHHHHHHHHHHHHHHHT-TSEEEEECCSSCCCCHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeee----------eHHHHhcccCCcHHHHHHHHHHHHHHhc-CCceEEEEecccCCcHHHHHH
Confidence 45566666767999999732 2444444 577888888899988884 34555544 3 23334 567
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc------------------------CCcEEEe-CCCCCHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL------------------------SIPVIAN-GDVFEYDD 216 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~------------------------~iPVi~n-GgI~s~~d 216 (326)
.++...++|+|+|- |..+...+.+..+.++-+++.+ ++.|=++ |||+|.+|
T Consensus 171 A~~ia~~AGADFVK----TSTGf~~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~vgvKAs~GGIrt~e~ 246 (297)
T 4eiv_A 171 AAVAALEGGADFLQ----TSSGLGATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCIGIKIEVGDVHMAET 246 (297)
T ss_dssp HHHHHHHHTCSEEE----CCCSSSSCCCCHHHHHHHHHHHHHHHCC------------------CCEEEEECTTCCHHHH
T ss_pred HHHHHHHhCCCEEE----cCCCCCCCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCceeEEecCCCCCCHHH
Confidence 88899999999994 4444434455666555444433 4778899 99999999
Q ss_pred HHHHHH
Q 020428 217 FQRIKT 222 (326)
Q Consensus 217 ~~~~l~ 222 (326)
+..+++
T Consensus 247 A~~~i~ 252 (297)
T 4eiv_A 247 ADFLMQ 252 (297)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999995
No 235
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=97.84 E-value=0.00027 Score=64.08 Aligned_cols=201 Identities=14% Similarity=0.068 Sum_probs=125.5
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeCce--ecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-CC-CCH
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGEEI--IDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-GT-SDA 87 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te~i--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~g-~~~ 87 (326)
|.+.-|..+.+++.+.|.+.+++.-. +...+.+ .+.+...+.+. ....-........|+++-+ +| .++
T Consensus 25 ~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~------pD~~~vt~~em--~~~~~~I~r~~~~PviaD~d~Gyg~~ 96 (287)
T 3b8i_A 25 TASVFDPMSARIAADLGFECGILGGSVASLQVLAA------PDFALITLSEF--VEQATRIGRVARLPVIADADHGYGNA 96 (287)
T ss_dssp CEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSC------CSSSCSCHHHH--HHHHHHHHTTCSSCEEEECTTCSSSH
T ss_pred EecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCC------CCCCCCCHHHH--HHHHHHHHhcCCCCEEEECCCCCCCH
Confidence 34677999999999999987775422 1111111 11111110000 0000111223345888887 33 288
Q ss_pred HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCC---CChHHHHHH
Q 020428 88 VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLL---KSSQDTVEL 162 (326)
Q Consensus 88 ~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g---~~~~~~~e~ 162 (326)
+...+.++.+.+ |+.+|.|--+.. ++.+....|. +-..+...+-|++++++- +.++.+--|.. ...+++++-
T Consensus 97 ~~~~~~v~~l~~aGa~gv~iED~~~-pKrcgh~~gk--l~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai~R 173 (287)
T 3b8i_A 97 LNVMRTVVELERAGIAALTIEDTLL-PAQFGRKSTD--LICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVIQR 173 (287)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECBCC-SCCTTTCTTC--BCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEEcCCCC-ccccCCCCCC--ccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHHHH
Confidence 888888888776 999999987642 3333333343 556666667777776653 33444444431 223689999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe-CC---CCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN-GD---VFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n-Gg---I~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
++.++++|+|.|.+++. .+.+.++++.+.+++|++.. || ..|.+ ++- +.|+..|..|-.++
T Consensus 174 a~ay~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~ii~~~g~~~~~~~~---eL~-~lGv~~v~~~~~~~ 238 (287)
T 3b8i_A 174 TLAYQEAGADGICLVGV---------RDFAHLEAIAEHLHIPLMLVTYGNPQLRDDA---RLA-RLGVRVVVNGHAAY 238 (287)
T ss_dssp HHHHHHTTCSEEEEECC---------CSHHHHHHHHTTCCSCEEEECTTCGGGCCHH---HHH-HTTEEEEECCCHHH
T ss_pred HHHHHHcCCCEEEecCC---------CCHHHHHHHHHhCCCCEEEeCCCCCCCCCHH---HHH-HcCCcEEEEChHHH
Confidence 99999999999999864 25688999999999999843 33 34444 444 68999998886544
No 236
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=97.82 E-value=0.00022 Score=65.53 Aligned_cols=200 Identities=14% Similarity=0.050 Sum_probs=123.2
Q ss_pred cCCCCHHHHHHHHHcCCCeEEeCce--ecccccccccccccccCcccccc--cCCcceeeecccCCCCcEEEEE-CC-CC
Q 020428 13 VRVGTLPFRLLAAQYGADITYGEEI--IDHKLLKCERRVNEYIGSTDFVE--KGTDSVVFRTCHQERNHVVFQM-GT-SD 86 (326)
Q Consensus 13 ~g~t~~~fr~~~~~~G~~l~~te~i--~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~vQl-~g-~~ 86 (326)
.+.-|....+++.+.|.+.+++.-. +...+.+ .+.+...+-+ ...+. +.+..+ +.|+++-+ +| .+
T Consensus 44 ~~ayD~~sA~i~e~aGfdai~vs~~~~a~~~lG~------pD~~~vt~~em~~~~~~-I~r~~~--~~PviaD~d~Gyg~ 114 (318)
T 1zlp_A 44 PGVQDALSAAVVEKTGFHAAFVSGYSVSAAMLGL------PDFGLLTTTEVVEATRR-ITAAAP--NLCVVVDGDTGGGG 114 (318)
T ss_dssp EEECSHHHHHHHHHTTCSEEEECHHHHHHHHHCC------CSSSCSCHHHHHHHHHH-HHHHSS--SSEEEEECTTCSSS
T ss_pred ecCCCHHHHHHHHHcCCCEEEECcHHHhhHhcCC------CCCCCCCHHHHHHHHHH-HHhhcc--CCCEEEeCCCCCCC
Confidence 3667899999999999988876532 2111211 1111111000 00000 111121 46899888 33 27
Q ss_pred HHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCC----hHHHH
Q 020428 87 AVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKS----SQDTV 160 (326)
Q Consensus 87 ~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~----~~~~~ 160 (326)
++...+.++.+.+ |+.+|.|--+.. ++++..-.|..| -..+...+-|++++++. +.++.+--|..-. .++++
T Consensus 115 ~~~v~~tv~~l~~aGaagv~iED~~~-~k~cgH~~gk~L-~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl~~ai 192 (318)
T 1zlp_A 115 PLNVQRFIRELISAGAKGVFLEDQVW-PKKCGHMRGKAV-VPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGLEEGI 192 (318)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECBCS-SCCCSSSSCCCB-CCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEECCCCC-CccccCCCCCcc-CCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCHHHHH
Confidence 8888888888776 999999986642 333322223334 44555555556665543 3455555554221 25788
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe---C---CCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN---G---DVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n---G---gI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
+-++.++++|+|.|.+++. .+.+.++++.+.+++|+.+| | ...|.+ ++- +.|+..|..|-.
T Consensus 193 ~Ra~Ay~eAGAd~i~~e~~---------~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~---eL~-~lGv~~v~~~~~ 259 (318)
T 1zlp_A 193 RRANLYKEAGADATFVEAP---------ANVDELKEVSAKTKGLRIANMIEGGKTPLHTPE---EFK-EMGFHLIAHSLT 259 (318)
T ss_dssp HHHHHHHHTTCSEEEECCC---------CSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHH---HHH-HHTCCEEEECSH
T ss_pred HHHHHHHHcCCCEEEEcCC---------CCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHH---HHH-HcCCeEEEEchH
Confidence 9999999999999999864 25788999999999999765 3 244544 344 689999999865
Q ss_pred hh
Q 020428 235 AL 236 (326)
Q Consensus 235 ~l 236 (326)
++
T Consensus 260 ~~ 261 (318)
T 1zlp_A 260 AV 261 (318)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 237
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=97.81 E-value=0.00031 Score=66.86 Aligned_cols=125 Identities=17% Similarity=0.118 Sum_probs=100.8
Q ss_pred HHHHHHHHHH-hhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHHH
Q 020428 87 AVRALTAAKM-VCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 87 ~~~~~~aa~~-~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a 163 (326)
++++.+.++. +.+ ||..+-+..| .+++.-.+.++++|+++ ++++.+...-+|+..++++++
T Consensus 169 ~e~~~~~a~~~~~~~G~~~~K~KvG----------------~~~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~ 232 (398)
T 4dye_A 169 PKAMAEHAVRVVEEGGFDAVKLKGT----------------TDCAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAG 232 (398)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECC----------------SCHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEecC----------------CCHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHH
Confidence 5777766554 566 9999998765 13566677888888886 677888888889999999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+.+++.|+.+|- |.. + |++..+++++.+++||.+...+.+..++.++++...+|.|++--+-.+
T Consensus 233 ~~l~~~~i~~iE-------qP~--~-d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~G 296 (398)
T 4dye_A 233 IALEELDLEYLE-------DPC--V-GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWG 296 (398)
T ss_dssp HHHGGGCCSEEE-------CCS--S-HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHT
T ss_pred HHHhhcCCCEEc-------CCC--C-CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccC
Confidence 999999999983 222 2 788899999999999999999999999999997666899988654443
No 238
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.79 E-value=5.1e-05 Score=65.81 Aligned_cols=74 Identities=12% Similarity=0.030 Sum_probs=56.3
Q ss_pred HHHHHHcCCcEEEEeecc--c-CCCCCCcCCHHHHHHHHHh--cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 163 ARRIEKTGVSALAVHGRK--V-ADRPRDPAKWGEIADIVAA--LSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~--~-~~~~~~~~~~~~i~~i~~~--~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+..++ .|+|+|.+..-- . ...+..+.+|+.++++++. .++||++.|||+ ++.+.+++ ..|++||.++++++.
T Consensus 101 ~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~-~~nv~~~~-~~Ga~gVav~s~i~~ 177 (210)
T 3ceu_A 101 VKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGIN-EDNLLEIK-DFGFGGAVVLGDLWN 177 (210)
T ss_dssp HHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCC-TTTHHHHH-HTTCSEEEESHHHHT
T ss_pred HHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCC-HHHHHHHH-HhCCCEEEEhHHhHc
Confidence 44445 899999975531 1 1122245689999999887 689999999998 89999999 599999999999986
Q ss_pred Cc
Q 020428 238 NA 239 (326)
Q Consensus 238 ~P 239 (326)
.+
T Consensus 178 ~~ 179 (210)
T 3ceu_A 178 KF 179 (210)
T ss_dssp TC
T ss_pred CC
Confidence 33
No 239
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=97.78 E-value=0.00065 Score=60.95 Aligned_cols=157 Identities=13% Similarity=0.156 Sum_probs=97.4
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeCceeccc-ccccccccccccCcccccccCCccee---eeccc-CCCCcEEEEE-CCC
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGEEIIDHK-LLKCERRVNEYIGSTDFVEKGTDSVV---FRTCH-QERNHVVFQM-GTS 85 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te~i~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~p~~vQl-~g~ 85 (326)
|.+.-|..+.+++.+.|++.+.+....... +.+ .+.....+ ..++ -.... ....++++-+ ||+
T Consensus 21 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~------~dt~~vTl-----demi~h~~aV~r~~~~~~vvaD~pfgs 89 (275)
T 1o66_A 21 MLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGR------KSTLPVSL-----RDMCYHTECVARGAKNAMIVSDLPFGA 89 (275)
T ss_dssp EEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCC------SSSTTCCH-----HHHHHHHHHHHHHCSSSEEEEECCTTS
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCC------CCCCCCCH-----HHHHHHHHHHHhhCCCCeEEEECCCCC
Confidence 346679999999999999988876322211 111 00000000 0100 00111 1223566666 443
Q ss_pred ---CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC---------
Q 020428 86 ---DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--------- 152 (326)
Q Consensus 86 ---~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--------- 152 (326)
++++..+.|.++.+ |+++|.|--| +...+.|+++.++ ++||..-+.+
T Consensus 90 y~~s~~~a~~na~rl~kaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPQs~~~~g 149 (275)
T 1o66_A 90 YQQSKEQAFAAAAELMAAGAHMVKLEGG-------------------VWMAETTEFLQMR-GIPVCAHIGLTPQSVFAFG 149 (275)
T ss_dssp SSSCHHHHHHHHHHHHHTTCSEEEEECS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGTTC--
T ss_pred ccCCHHHHHHHHHHHHHcCCcEEEECCc-------------------HHHHHHHHHHHHc-CCCeEeeeccCceeecccC
Confidence 68888777666655 9999998643 2344556666554 7887643332
Q ss_pred -----C--CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeC
Q 020428 153 -----L--KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANG 209 (326)
Q Consensus 153 -----g--~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nG 209 (326)
+ ...++.++-|+.++++|++.|.+.+. | -+..++|.+.+++|+|+-|
T Consensus 150 gf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIG 203 (275)
T 1o66_A 150 GYKVQGRGGKAQALLNDAKAHDDAGAAVVLMECV--------L--AELAKKVTETVSCPTIGIG 203 (275)
T ss_dssp ---------CHHHHHHHHHHHHHTTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEES
T ss_pred CeEEEeChHHHHHHHHHHHHHHHcCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEEC
Confidence 1 12357888999999999999999764 1 3678899999999999866
No 240
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=97.76 E-value=4.1e-05 Score=66.76 Aligned_cols=134 Identities=11% Similarity=0.057 Sum_probs=80.0
Q ss_pred cEEEE--ECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC
Q 020428 77 HVVFQ--MGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK 154 (326)
Q Consensus 77 p~~vQ--l~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~ 154 (326)
|+++- +. ..|+.+.+.+ +..|+|+|-++.-.+ .+.+.++++.+++. +++..+.+ ++.
T Consensus 61 ~i~ld~~l~-d~p~~~~~~~--~~aGad~i~vh~~~~----------------~~~~~~~~~~~~~~-g~~~~~d~-l~~ 119 (218)
T 3jr2_A 61 ILVCDMKTT-DGGAILSRMA--FEAGADWITVSAAAH----------------IATIAACKKVADEL-NGEIQIEI-YGN 119 (218)
T ss_dssp EEEEEEEEC-SCHHHHHHHH--HHHTCSEEEEETTSC----------------HHHHHHHHHHHHHH-TCEEEEEC-CSS
T ss_pred cEEEEEeec-ccHHHHHHHH--HhcCCCEEEEecCCC----------------HHHHHHHHHHHHHh-CCccceee-eec
Confidence 55543 33 4566654333 223999999985321 23456677777654 55444322 222
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEe-ecccCCCCCCcCCHHHHHHHHHh--cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 155 SSQDTVELARRIEKTGVSALAVH-GRKVADRPRDPAKWGEIADIVAA--LSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh-~r~~~~~~~~~~~~~~i~~i~~~--~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
. +. +-++.+.+.|+|++.++ +.+.. ........+.++++++. .++|+++.||| +++.+.+++ ..|||+|.+
T Consensus 120 ~--T~-~~~~~~~~~g~d~v~~~~~~~~~-~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~-~aGAd~vvv 193 (218)
T 3jr2_A 120 W--TM-QDAKAWVDLGITQAIYHRSRDAE-LAGIGWTTDDLDKMRQLSALGIELSITGGI-VPEDIYLFE-GIKTKTFIA 193 (218)
T ss_dssp C--CH-HHHHHHHHTTCCEEEEECCHHHH-HHTCCSCHHHHHHHHHHHHTTCEEEEESSC-CGGGGGGGT-TSCEEEEEE
T ss_pred C--CH-HHHHHHHHcCccceeeeeccccc-cCCCcCCHHHHHHHHHHhCCCCCEEEECCC-CHHHHHHHH-HcCCCEEEE
Confidence 1 12 34555566799998764 32221 10011123344455443 48999999999 589998888 699999999
Q ss_pred ccchhc
Q 020428 232 ARGALW 237 (326)
Q Consensus 232 Gr~~l~ 237 (326)
||++..
T Consensus 194 GsaI~~ 199 (218)
T 3jr2_A 194 GRALAG 199 (218)
T ss_dssp SGGGSH
T ss_pred chhhcC
Confidence 999764
No 241
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=97.76 E-value=0.00046 Score=62.88 Aligned_cols=203 Identities=14% Similarity=0.071 Sum_probs=118.6
Q ss_pred cCCCCHHHHHHHHHcCCCeEEeC-ceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-CC-CCHHH
Q 020428 13 VRVGTLPFRLLAAQYGADITYGE-EIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-GT-SDAVR 89 (326)
Q Consensus 13 ~g~t~~~fr~~~~~~G~~l~~te-~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~g-~~~~~ 89 (326)
.+.-|....+++.+.|.+.+++. ...+..+.. .+.+...+.+. ....-......+.|+++-+ +| .+++.
T Consensus 24 ~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~------pD~~~vt~~em--~~~~~~I~~~~~~PviaD~d~Gyg~~~~ 95 (295)
T 1s2w_A 24 MEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGV------RDSNEASWTQV--VEVLEFMSDASDVPILLDADTGYGNFNN 95 (295)
T ss_dssp EEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------------CHHH--HHHHHHHHHTCSSCEEEECCSSCSSHHH
T ss_pred ecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCC------CCCCCCCHHHH--HHHHHHHHhcCCCCEEecCCCCCCCHHH
Confidence 36679999999999999877765 211112211 11111110000 0000111223346888887 33 25777
Q ss_pred HHHHHHHhhc-CCCEEEEccCCCcccccccccc-ccccCChHHHHHHHHHHhhcc-cCcEEEEecCC-----CChHHHHH
Q 020428 90 ALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMG-AALLSKPELIHDILTMLKRNL-DVPVTCKIRLL-----KSSQDTVE 161 (326)
Q Consensus 90 ~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G-~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g-----~~~~~~~e 161 (326)
..+.++.+.+ |+.+|.|--+.. ++++..-.| ..-+...+...+-|++++++- +.++.+--|.. ...+++++
T Consensus 96 v~~~v~~l~~aGaagv~iED~~~-~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~ 174 (295)
T 1s2w_A 96 ARRLVRKLEDRGVAGACLEDKLF-PKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALK 174 (295)
T ss_dssp HHHHHHHHHHTTCCEEEEECBCC---------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEECCCCC-CccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHH
Confidence 8888877766 999999986642 222221111 122334444455555555543 44455555542 22478999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC--CcEEEeCC---CCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS--IPVIANGD---VFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~--iPVi~nGg---I~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
-++.++++|+|.|.+++. ..+.+.++++.+.++ +|+++|-+ -.+ ..++- +.|+..|..|-.++
T Consensus 175 Ra~ay~eAGAd~i~~e~~--------~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~---~~eL~-~lGv~~v~~~~~~~ 242 (295)
T 1s2w_A 175 RAEAYRNAGADAILMHSK--------KADPSDIEAFMKAWNNQGPVVIVPTKYYKTP---TDHFR-DMGVSMVIWANHNL 242 (295)
T ss_dssp HHHHHHHTTCSEEEECCC--------SSSSHHHHHHHHHHTTCSCEEECCSTTTTSC---HHHHH-HHTCCEEEECSHHH
T ss_pred HHHHHHHcCCCEEEEcCC--------CCCHHHHHHHHHHcCCCCCEEEeCCCCCCCC---HHHHH-HcCCcEEEEChHHH
Confidence 999999999999999852 224678899999887 99999843 344 44444 68999999885533
No 242
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=97.74 E-value=0.00018 Score=61.27 Aligned_cols=75 Identities=21% Similarity=0.292 Sum_probs=61.4
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
|......-.+.+++...|++-+-. |.. -+.++++++.+++|||+.|+|+|.+|+.+++ ..||++|..++.
T Consensus 112 DS~al~~~~~~i~~~~PD~iEiLP--------Gi~-p~iI~~i~~~~~~PiIaGGlI~~~edv~~al-~aGA~aVsTs~~ 181 (192)
T 3kts_A 112 DSSAYNKGVALIQKVQPDCIELLP--------GII-PEQVQKMTQKLHIPVIAGGLIETSEQVNQVI-ASGAIAVTTSNK 181 (192)
T ss_dssp SHHHHHHHHHHHHHHCCSEEEEEC--------TTC-HHHHHHHHHHHCCCEEEESSCCSHHHHHHHH-TTTEEEEEECCG
T ss_pred EcchHHHHHHHHhhcCCCEEEECC--------chh-HHHHHHHHHhcCCCEEEECCcCCHHHHHHHH-HcCCeEEEeCCH
Confidence 444455667778888889886652 222 3789999999999999999999999999999 699999999998
Q ss_pred hhcCc
Q 020428 235 ALWNA 239 (326)
Q Consensus 235 ~l~~P 239 (326)
.||+-
T Consensus 182 ~LW~~ 186 (192)
T 3kts_A 182 HLWEG 186 (192)
T ss_dssp GGGTT
T ss_pred HHhCc
Confidence 88764
No 243
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=97.73 E-value=9.9e-05 Score=64.93 Aligned_cols=148 Identities=9% Similarity=0.135 Sum_probs=96.9
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccc-----------cccccccccccCChHHHHHH----------
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSF-----------SVSGGMGAALLSKPELIHDI---------- 134 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~-----------~~~~~~G~~l~~~p~~~~~i---------- 134 (326)
|++.=+.+.++++....++.+.+ |+..||+.+-.|... ...-|.|.- -+++.+...
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTV--lt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTI--LNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECC--CSHHHHHHHHHHTCSEEEC
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCc--CCHHHHHHHHHcCCCEEEe
Confidence 67777789999999999998877 899999977655410 011233432 234444433
Q ss_pred -------HHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEE
Q 020428 135 -------LTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVI 206 (326)
Q Consensus 135 -------v~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi 206 (326)
++..++. ++|+..-+. +.+.+..+.++|+|.|-+..-. ..+ ..++++.++.-+ ++|++
T Consensus 113 P~~~~~vi~~~~~~-gi~~ipGv~-------TptEi~~A~~~Gad~vK~FPa~----~~g--G~~~lkal~~p~p~ip~~ 178 (232)
T 4e38_A 113 PGFNPNTVRACQEI-GIDIVPGVN-------NPSTVEAALEMGLTTLKFFPAE----ASG--GISMVKSLVGPYGDIRLM 178 (232)
T ss_dssp SSCCHHHHHHHHHH-TCEEECEEC-------SHHHHHHHHHTTCCEEEECSTT----TTT--HHHHHHHHHTTCTTCEEE
T ss_pred CCCCHHHHHHHHHc-CCCEEcCCC-------CHHHHHHHHHcCCCEEEECcCc----ccc--CHHHHHHHHHHhcCCCee
Confidence 3333222 444444331 3344566678999999886531 111 358899998865 79999
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
..|||. ++.+.+.+ ..|+.++.+|+.+ .+|.+..
T Consensus 179 ptGGI~-~~n~~~~l-~aGa~~~vgGs~l-~~~~~i~ 212 (232)
T 4e38_A 179 PTGGIT-PSNIDNYL-AIPQVLACGGTWM-VDKKLVT 212 (232)
T ss_dssp EBSSCC-TTTHHHHH-TSTTBCCEEECGG-GCHHHHH
T ss_pred eEcCCC-HHHHHHHH-HCCCeEEEECchh-cChHHhh
Confidence 999995 89999999 6899998887654 3444443
No 244
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=97.72 E-value=0.00031 Score=62.29 Aligned_cols=102 Identities=8% Similarity=0.161 Sum_probs=77.9
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCc
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIP 204 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iP 204 (326)
+++.+.++++...+ .+..+.|-+. ..+.++.+.+.|++.|-|.+|.-. +-..|.+...++...+ ++.
T Consensus 138 ~~~~l~~l~~~A~~-lGl~~LvEVh-------~~~El~rAl~~~a~iIGINNRnL~---tf~vdl~~t~~L~~~ip~~~~ 206 (258)
T 4a29_A 138 TERELESLLEYARS-YGMEPLILIN-------DENDLDIALRIGARFIGIMSRDFE---TGEINKENQRKLISMIPSNVV 206 (258)
T ss_dssp CHHHHHHHHHHHHH-TTCCCEEEES-------SHHHHHHHHHTTCSEEEECSBCTT---TCCBCHHHHHHHHTTSCTTSE
T ss_pred CHHHHHHHHHHHHH-HhHHHHHhcc-------hHHHHHHHhcCCCcEEEEeCCCcc---ccccCHHHHHHHHhhCCCCCE
Confidence 45667777766654 4666666653 233355666789999988888654 2345788888888776 578
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
+|+-+||.|++|+.++. ..|+|+|.||.+++.+|.
T Consensus 207 ~VsESGI~t~~dv~~l~-~~G~~a~LVGealmr~~d 241 (258)
T 4a29_A 207 KVAKLGISERNEIEELR-KLGVNAFLISSSLMRNPE 241 (258)
T ss_dssp EEEEESSCCHHHHHHHH-HTTCCEEEECHHHHHCTT
T ss_pred EEEcCCCCCHHHHHHHH-HCCCCEEEECHHHhCCCc
Confidence 89999999999999998 699999999999999875
No 245
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=97.69 E-value=5.6e-05 Score=66.43 Aligned_cols=137 Identities=8% Similarity=0.070 Sum_probs=94.8
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHH---HHhhcccCcEEEEec
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILT---MLKRNLDVPVTCKIR 151 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~---~v~~~~~~pv~vK~r 151 (326)
+.|+.+.|..+||+.+.+. +.+ +|.|-+|...... + +.+.++ .+++. +..+.+-+.
T Consensus 64 ~~~~dvhLmv~dp~~~i~~---~~~-Ad~itvH~ea~~~-------------~---~~~~i~~~~~i~~~-G~k~gvaln 122 (227)
T 1tqx_A 64 SIFFDVHLMVEYPEKYVPL---LKT-SNQLTFHFEALNE-------------D---TERCIQLAKEIRDN-NLWCGISIK 122 (227)
T ss_dssp SCEEEEEEESSCGGGGGGG---CTT-SSEEEEEGGGGTT-------------C---HHHHHHHHHHHHTT-TCEEEEEEC
T ss_pred CCcEEEEEEEcCHHHHHHH---HHh-CCEEEEeecCCcc-------------C---HHHHHHHHHHHHHc-CCeEEEEeC
Confidence 3589999999999866532 223 7899998653210 2 334555 77654 655555553
Q ss_pred CCCChHHHHHHHHHHHHcC-CcEEEEeecc---cCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCC
Q 020428 152 LLKSSQDTVELARRIEKTG-VSALAVHGRK---VADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGA 226 (326)
Q Consensus 152 ~g~~~~~~~e~a~~l~~~G-~d~i~vh~r~---~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Ga 226 (326)
.. +..+.++.+.+.| +|.|.+.... ..|.+ .+..++-++++++.. +++|.+-|||. .+.+..+. ..||
T Consensus 123 p~----tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f-~~~~l~ki~~lr~~~~~~~I~VdGGI~-~~ti~~~~-~aGA 195 (227)
T 1tqx_A 123 PK----TDVQKLVPILDTNLINTVLVMTVEPGFGGQSF-MHDMMGKVSFLRKKYKNLNIQVDGGLN-IETTEISA-SHGA 195 (227)
T ss_dssp TT----SCGGGGHHHHTTTCCSEEEEESSCTTCSSCCC-CGGGHHHHHHHHHHCTTCEEEEESSCC-HHHHHHHH-HHTC
T ss_pred CC----CcHHHHHHHhhcCCcCEEEEeeeccCCCCccc-chHHHHHHHHHHHhccCCeEEEECCCC-HHHHHHHH-HcCC
Confidence 32 3345566666766 9999665443 33433 455688888888876 78999999997 78999999 6999
Q ss_pred cEEEeccchhcCc
Q 020428 227 SSVMAARGALWNA 239 (326)
Q Consensus 227 d~VmiGr~~l~~P 239 (326)
|.+++||+++..+
T Consensus 196 d~~V~GsaIf~~~ 208 (227)
T 1tqx_A 196 NIIVAGTSIFNAE 208 (227)
T ss_dssp CEEEESHHHHTCS
T ss_pred CEEEEeHHHhCCC
Confidence 9999999977644
No 246
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.68 E-value=7e-05 Score=73.27 Aligned_cols=70 Identities=19% Similarity=0.247 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
.+..+.++.+.++|+|.|.++..... .+..++.++++++.. ++||++ |++.|.+++..+. +.|||+|.+|
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g~----~~~~~~~v~~i~~~~p~~~Vi~-g~v~t~e~a~~l~-~aGaD~I~vg 298 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHGH----SKGVIERVRWVKQTFPDVQVIG-GNIATAEAAKALA-EAGADAVKVG 298 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCCS----BHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred cchHHHHHHHhhcccceEEecccCCc----chhHHHHHHHHHHHCCCceEEE-eeeCcHHHHHHHH-HcCCCEEEEC
Confidence 35678889999999999999854211 223468889999887 788887 7899999999998 6999999986
No 247
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=97.67 E-value=9.6e-05 Score=64.81 Aligned_cols=146 Identities=13% Similarity=0.165 Sum_probs=92.8
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccc--c---------ccccccccccCChHHHHH-----------
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSF--S---------VSGGMGAALLSKPELIHD----------- 133 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~--~---------~~~~~G~~l~~~p~~~~~----------- 133 (326)
|++.=|-+.+++++.+.++.+.+ |++.|++.+-.|... + ..-++|. ++ +.+.+..
T Consensus 18 ~ii~vir~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGt-vl-~~d~~~~A~~aGAd~v~~ 95 (224)
T 1vhc_A 18 KIVPVIALDNADDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGT-VL-TAEQVVLAKSSGADFVVT 95 (224)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEES-CC-SHHHHHHHHHHTCSEEEC
T ss_pred CeEEEEeCCCHHHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCc-Ee-eHHHHHHHHHCCCCEEEE
Confidence 56666677888888888877766 788888875433210 0 0112333 22 3333332
Q ss_pred ------HHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc-CCcE
Q 020428 134 ------ILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL-SIPV 205 (326)
Q Consensus 134 ------iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~-~iPV 205 (326)
+++..++ .+.|+..-+ .+.+.+..+.+.|+|+|-++.- .+. -.+.++.++..+ ++|+
T Consensus 96 p~~d~~v~~~ar~-~g~~~i~Gv-------~t~~e~~~A~~~Gad~vk~Fpa-------~~~gG~~~lk~l~~~~~~ipv 160 (224)
T 1vhc_A 96 PGLNPKIVKLCQD-LNFPITPGV-------NNPMAIEIALEMGISAVKFFPA-------EASGGVKMIKALLGPYAQLQI 160 (224)
T ss_dssp SSCCHHHHHHHHH-TTCCEECEE-------CSHHHHHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHTTTTTCEE
T ss_pred CCCCHHHHHHHHH-hCCCEEecc-------CCHHHHHHHHHCCCCEEEEeeC-------ccccCHHHHHHHHhhCCCCeE
Confidence 2333333 344443322 1233356677899999999551 111 267889999887 7999
Q ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 206 IANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 206 i~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
++.|||. ++.+.++++..|+++|. |+++...+.+
T Consensus 161 vaiGGI~-~~N~~~~l~agga~~v~-gS~i~~~~~i 194 (224)
T 1vhc_A 161 MPTGGIG-LHNIRDYLAIPNIVACG-GSWFVEKKLI 194 (224)
T ss_dssp EEBSSCC-TTTHHHHHTSTTBCCEE-ECGGGCHHHH
T ss_pred EEECCcC-HHHHHHHHhcCCCEEEE-EchhcCcchh
Confidence 9999994 68899999433999999 9988776665
No 248
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=97.66 E-value=0.00044 Score=65.22 Aligned_cols=133 Identities=9% Similarity=0.159 Sum_probs=100.7
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhccc---CcEEEEecC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLD---VPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~---~pv~vK~r~ 152 (326)
|+-..+++.+++.+.+.++.+. +||..+-+..|. .+++.-.+.+++++++++ +.+.+...-
T Consensus 153 p~~~~i~~~~~e~~~~~a~~~~~~G~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~~l~vDaN~ 217 (377)
T 2pge_A 153 PVNGLIWMGEAAFMQEQIEAKLAEGYGCLKLKIGA---------------IDFDKECALLAGIRESFSPQQLEIRVDANG 217 (377)
T ss_dssp EBCEEECCCCHHHHHHHHHHHHHTTCSEEEEEC------------------CHHHHHHHHHHHHHHSCTTTCEEEEECTT
T ss_pred EEeEEecCCCHHHHHHHHHHHHHHhhhhheeecCC---------------CChHHHHHHHHHHHHHcCCCCceEEEECCC
Confidence 4444566678888877666554 599999987653 256777788888888764 566666666
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHH--HHHHHHhcCCcEEE
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDD--FQRIKTAAGASSVM 230 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d--~~~~l~~~Gad~Vm 230 (326)
+|+.++++++++.+++.++.+|- | +..+.||+..+++++.+++||.+.-.+.|..+ +.++++...+|.|+
T Consensus 218 ~~~~~~a~~~~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ 289 (377)
T 2pge_A 218 AFSPANAPQRLKRLSQFHLHSIE-------Q-PIRQHQWSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYII 289 (377)
T ss_dssp BBCTTTHHHHHHHHHTTCCSEEE-------C-CBCSSCHHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEE
T ss_pred CCCHHHHHHHHHHHhcCCCcEEE-------c-cCCcccHHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEE
Confidence 78888999999999999988762 1 22445899999999999999999888888888 77888767789887
Q ss_pred ec
Q 020428 231 AA 232 (326)
Q Consensus 231 iG 232 (326)
+=
T Consensus 290 ik 291 (377)
T 2pge_A 290 LK 291 (377)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 249
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=97.65 E-value=0.00059 Score=61.45 Aligned_cols=157 Identities=17% Similarity=0.205 Sum_probs=94.1
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeCceeccc-ccccccccccccCcccccccCCccee---eecccCCC-CcEEEEE-CCC
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGEEIIDHK-LLKCERRVNEYIGSTDFVEKGTDSVV---FRTCHQER-NHVVFQM-GTS 85 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te~i~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~p~~vQl-~g~ 85 (326)
|.+.-|..+.+++.+.|++.+.+....... +.+ .+.....+ ..++ -......+ .++++-+ ||+
T Consensus 38 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~------~dt~~vTl-----demi~h~~aV~r~~~~~~vvaD~pfgs 106 (281)
T 1oy0_A 38 MLTAYDYSTARIFDEAGIPVLLVGDSAANVVYGY------DTTVPISI-----DELIPLVRGVVRGAPHALVVADLPFGS 106 (281)
T ss_dssp EEECCSHHHHHHHHTTTCCEEEECTTHHHHTTCC------SSSSSCCG-----GGTHHHHHHHHHHCTTSEEEEECCTTS
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCC------CCCCCCCH-----HHHHHHHHHHHhcCCCCeEEEECCCCc
Confidence 345669999999999999988775322211 111 00000000 0110 01111122 3455555 443
Q ss_pred ---CHHHHHH-HHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--------
Q 020428 86 ---DAVRALT-AAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL-------- 152 (326)
Q Consensus 86 ---~~~~~~~-aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~-------- 152 (326)
++++..+ +.+.+++ |+++|.|--| +...+.|+++.++ ++||..-+.+
T Consensus 107 y~~s~~~a~~na~rl~~eaGa~aVklEdg-------------------~e~~~~I~al~~a-gIpV~gHiGLtPqsv~~~ 166 (281)
T 1oy0_A 107 YEAGPTAALAAATRFLKDGGAHAVKLEGG-------------------ERVAEQIACLTAA-GIPVMAHIGFTPQSVNTL 166 (281)
T ss_dssp STTCHHHHHHHHHHHHHTTCCSEEEEEBS-------------------GGGHHHHHHHHHH-TCCEEEEEECCC------
T ss_pred ccCCHHHHHHHHHHHHHHhCCeEEEECCc-------------------HHHHHHHHHHHHC-CCCEEeeecCCcceeccc
Confidence 6777655 5666665 9999998643 1344556666554 7887632222
Q ss_pred ------CCC--hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeC
Q 020428 153 ------LKS--SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANG 209 (326)
Q Consensus 153 ------g~~--~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nG 209 (326)
+.+ .++.++-|+.++++|++.|.+.+. | -+..++|.+.+++|+|+-|
T Consensus 167 ggf~v~grt~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIG 221 (281)
T 1oy0_A 167 GGFRVQGRGDAAEQTIADAIAVAEAGAFAVVMEMV--------P--AELATQITGKLTIPTVGIG 221 (281)
T ss_dssp --------CHHHHHHHHHHHHHHHHTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEES
T ss_pred CCeEEEeCcHHHHHHHHHHHHHHHcCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEeC
Confidence 122 256888899999999999999764 1 3678899999999999866
No 250
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=97.61 E-value=0.00064 Score=64.49 Aligned_cols=126 Identities=6% Similarity=0.174 Sum_probs=94.5
Q ss_pred EEEC-CCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCCh
Q 020428 80 FQMG-TSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSS 156 (326)
Q Consensus 80 vQl~-g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~ 156 (326)
..++ +.+++++.+.++.+. +||..+.+..| | ..+ .+.++++++++ ++.+.+-..-+|+.
T Consensus 154 ~~~g~~~~~e~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d----~~~v~avr~a~~~~~l~vDaN~~~~~ 215 (393)
T 1wuf_A 154 VSIGLQQNVETLLQLVNQYVDQGYERVKLKIA-P-------------NKD----IQFVEAVRKSFPKLSLMADANSAYNR 215 (393)
T ss_dssp EEECCCSCHHHHHHHHHHHHHHTCCEEEEECB-T-------------TBS----HHHHHHHHTTCTTSEEEEECTTCCCG
T ss_pred EEeCCCCCHHHHHHHHHHHHHHhhHhheeccC-h-------------HHH----HHHHHHHHHHcCCCEEEEECCCCCCH
Confidence 3444 346888877666554 49999998654 1 112 35577788776 45566666667888
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++ ++++.+++.++.+|- |. ..+.|++..+++++.+++||.+.-.+.+..++.++++...+|.|++=
T Consensus 216 ~~a-~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik 282 (393)
T 1wuf_A 216 EDF-LLLKELDQYDLEMIE-------QP-FGTKDFVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLK 282 (393)
T ss_dssp GGH-HHHHTTGGGTCSEEE-------CC-SCSSCSHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred HHH-HHHHHHHhCCCeEEE-------CC-CCCcCHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 888 999999999998874 22 34557899999999999999999999999999999976568988874
No 251
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=97.60 E-value=0.0016 Score=61.18 Aligned_cols=129 Identities=9% Similarity=0.117 Sum_probs=99.5
Q ss_pred EEEC-CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCC
Q 020428 80 FQMG-TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKS 155 (326)
Q Consensus 80 vQl~-g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~ 155 (326)
..+. +..++.+.+.++.+.+ |+..+-+..|- .+++.-.+.++++++.+ ++.+.+-..-+|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~g~~~~K~Kvg~---------------~~~~~d~~~v~avr~~~g~~~~l~vDaN~~~~ 200 (370)
T 2chr_A 136 WTLASGDTKRDLDSAVEMIERRRHNRFKVKLGF---------------RSPQDDLIHMEALSNSLGSKAYLRVDVNQAWD 200 (370)
T ss_dssp EEECSSCHHHHHHHHHHHHHTTSCCEEEEECSS---------------SCHHHHHHHHHHHHHHTTTTSEEEEECTTCCC
T ss_pred eeeccCchhhhHHHHHHHHhhcccceeeccccc---------------CChHHHHHHHHHHHHhcCCCcEEEecCCCCCC
Confidence 3343 4456777888887776 88888876652 23555566788888877 4567777777899
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 156 SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
.+++.++++.+++.++.+| +| +..+-|++.++++++.+++||.+.=.+.|..++.++++...+|.+++
T Consensus 201 ~~~A~~~~~~l~~~~~~~i-------Ee-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~ 268 (370)
T 2chr_A 201 EQVASVYIPELEALGVELI-------EQ-PVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSL 268 (370)
T ss_dssp THHHHHHHHHHHTTTCCEE-------EC-CSCSSCHHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECC
T ss_pred HHHHHHHHHHHHhcCCcee-------cC-CCChhhhhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEe
Confidence 9999999999999999886 22 23455899999999999999999999999999999996555787765
No 252
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=97.59 E-value=0.00018 Score=62.63 Aligned_cols=148 Identities=11% Similarity=0.119 Sum_probs=94.9
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccc-----c------ccccccccccCChHHHHHHHHHH-----
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSF-----S------VSGGMGAALLSKPELIHDILTML----- 138 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~-----~------~~~~~G~~l~~~p~~~~~iv~~v----- 138 (326)
.|++.=|-+.+++++.+.++.+.+ |++.|++..-.|... . .--++|. + -+.+.+...+++=
T Consensus 16 ~~~i~v~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagt-v-i~~d~~~~A~~aGAd~v~ 93 (214)
T 1wbh_A 16 GPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGT-V-LNPQQLAEVTEAGAQFAI 93 (214)
T ss_dssp CSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEES-C-CSHHHHHHHHHHTCSCEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCE-E-EEHHHHHHHHHcCCCEEE
Confidence 367877888899888888887777 799999976544311 0 0113333 2 2333333222211
Q ss_pred -----------hhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc-CCcE
Q 020428 139 -----------KRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL-SIPV 205 (326)
Q Consensus 139 -----------~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~-~iPV 205 (326)
+...+.|+..-+ .+.+.+..+.+.|+|+|-++.- .+. -.+.++.++..+ ++|+
T Consensus 94 ~p~~d~~v~~~~~~~g~~~i~G~-------~t~~e~~~A~~~Gad~v~~Fpa-------~~~gG~~~lk~i~~~~~~ipv 159 (214)
T 1wbh_A 94 SPGLTEPLLKAATEGTIPLIPGI-------STVSELMLGMDYGLKEFKFFPA-------EANGGVKALQAIAGPFSQVRF 159 (214)
T ss_dssp ESSCCHHHHHHHHHSSSCEEEEE-------SSHHHHHHHHHTTCCEEEETTT-------TTTTHHHHHHHHHTTCTTCEE
T ss_pred cCCCCHHHHHHHHHhCCCEEEec-------CCHHHHHHHHHCCCCEEEEecC-------ccccCHHHHHHHhhhCCCCeE
Confidence 111234443332 1233456667899999999651 111 267889999888 8999
Q ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 206 IANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 206 i~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
++.|||+ ++.+.++++..|+++|. |+++...+.+
T Consensus 160 vaiGGI~-~~n~~~~l~agg~~~v~-gS~i~~~~~~ 193 (214)
T 1wbh_A 160 CPTGGIS-PANYRDYLALKSVLCIG-GSWLVPADAL 193 (214)
T ss_dssp EEBSSCC-TTTHHHHHTSTTBSCEE-EGGGSCHHHH
T ss_pred EEECCCC-HHHHHHHHhcCCCeEEE-eccccChhhh
Confidence 9999995 68899999433999999 9988777665
No 253
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=97.58 E-value=0.00046 Score=63.28 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=69.6
Q ss_pred HHHHHHHHhhcccCcEEEEecC-----C--CCh-HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh--
Q 020428 131 IHDILTMLKRNLDVPVTCKIRL-----L--KSS-QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA-- 200 (326)
Q Consensus 131 ~~~iv~~v~~~~~~pv~vK~r~-----g--~~~-~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~-- 200 (326)
+.++.++.++ .++|+.+-+=. + .++ +...+.++.+.+.|+|++-++.-... ..+++.+.++.+.
T Consensus 144 i~~v~~~~~~-~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~-----~g~~~~~~~vv~~~~ 217 (304)
T 1to3_A 144 VKEFNELCHS-NGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYG-----KGARSDLLTASQRLN 217 (304)
T ss_dssp HHHHHHHHHT-TTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGG-----CSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCC-----CCCHHHHHHHHHhcc
Confidence 3333333332 38888775522 2 223 44566689999999999988863211 1267887777777
Q ss_pred --cCCc-EEEeCCCCCH----HHHHHHHHhcCCcEEEeccchhcC
Q 020428 201 --LSIP-VIANGDVFEY----DDFQRIKTAAGASSVMAARGALWN 238 (326)
Q Consensus 201 --~~iP-Vi~nGgI~s~----~d~~~~l~~~Gad~VmiGr~~l~~ 238 (326)
+++| |+..||+ +. +.+..++ ..|++||.+||++...
T Consensus 218 ~~~~~P~Vv~aGG~-~~~~~~~~~~~a~-~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 218 GHINMPWVILSSGV-DEKLFPRAVRVAM-EAGASGFLAGRAVWSS 260 (304)
T ss_dssp HTCCSCEEECCTTS-CTTTHHHHHHHHH-HTTCCEEEESHHHHGG
T ss_pred ccCCCCeEEEecCC-CHHHHHHHHHHHH-HcCCeEEEEehHHhCc
Confidence 8999 9999999 55 3466777 5799999999998866
No 254
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=97.58 E-value=0.0012 Score=62.09 Aligned_cols=116 Identities=15% Similarity=0.180 Sum_probs=91.1
Q ss_pred HHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHc
Q 020428 92 TAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKT 169 (326)
Q Consensus 92 ~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~ 169 (326)
++.+...+||..+-+..|- +++.-.+.++++|+++ ++.+.+-..-+|+..+++++++.+++.
T Consensus 151 ~~~~~~~~Gf~~~K~k~g~----------------~~~~di~~v~avr~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 214 (378)
T 4hpn_A 151 EMAERRAEGFHACKIKIGF----------------GVEEDLRVIAAVREAIGPDMRLMIDANHGYTVTEAITLGDRAAGF 214 (378)
T ss_dssp HHHHHHHTTCSEEEEECCS----------------CHHHHHHHHHHHHHHHTTTSEEEEECTTCCCHHHHHHHHHHHGGG
T ss_pred HHHHHHHhccceecccccC----------------ChHHHHHHHHHHHHhcCCcEEEEEecCcccCHHHHHHHHhhhhhc
Confidence 3444455699988886541 3555567788888887 567777777789999999999999999
Q ss_pred CCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 170 GVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 170 G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
++.+|- .+..+.|++..+++++.+++||.+.-.+.|..++.++++...+|.+++
T Consensus 215 ~i~~iE--------eP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 268 (378)
T 4hpn_A 215 GIDWFE--------EPVVPEQLDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQP 268 (378)
T ss_dssp CCSCEE--------CCSCTTCHHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECC
T ss_pred ccchhh--------cCCCccchhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEee
Confidence 988762 223455899999999999999999999999999999997666787754
No 255
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=97.55 E-value=0.001 Score=63.18 Aligned_cols=138 Identities=14% Similarity=0.149 Sum_probs=97.2
Q ss_pred EEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChH
Q 020428 80 FQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQ 157 (326)
Q Consensus 80 vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~ 157 (326)
..+...+++++.+.++... +||..+-+..|.+.+.. .-...++.-.+.++++|+++ +..+.+-..-+|+..
T Consensus 159 ~t~~~~~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~-------~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~w~~~ 231 (393)
T 3u9i_A 159 VTITTGSVTAAARAAQAIVARGVTTIKIKIGAGDPDA-------TTIRTMEHDLARIVAIRDVAPTARLILDGNCGYTAP 231 (393)
T ss_dssp EEEC---CHHHHHHHHHHHTTTCCEEEEECC--------------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSCCCHH
T ss_pred EEecCCCHHHHHHHHHHHHHcCCCeEEEEeCCCcccc-------cccccHHHHHHHHHHHHHHCCCCeEEEEccCCCCHH
Confidence 3455567888877776654 49999999887543210 00112455666788888876 455666666679999
Q ss_pred HHHHHHHHH--HHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 158 DTVELARRI--EKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 158 ~~~e~a~~l--~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++++++.+ ++.++.+| +| +..+.|++..+++++.+++||.+.=.+.|..++.++++...+|.|++=
T Consensus 232 ~A~~~~~~L~~~~~~i~~i-------Ee-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k 300 (393)
T 3u9i_A 232 DALRLLDMLGVHGIVPALF-------EQ-PVAKDDEEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIK 300 (393)
T ss_dssp HHHHHHHTTTTTTCCCSEE-------EC-CSCTTCTTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHhhCCCCeEEE-------EC-CCCCCcHHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEec
Confidence 999999999 77777776 12 223457888999999999999999899999999999976668888764
No 256
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=97.55 E-value=0.00083 Score=63.66 Aligned_cols=131 Identities=14% Similarity=0.162 Sum_probs=96.0
Q ss_pred EEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCCh
Q 020428 79 VFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSS 156 (326)
Q Consensus 79 ~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~ 156 (326)
...+...+++++.+.++... .||..+-+..|.. +++.-.+.++++|+++ +..+.+-..-+|+.
T Consensus 137 ~~t~~~~~~e~~~~~a~~~~~~G~~~iKlKvg~~---------------~~~~d~~~v~avR~~~~~~~L~vDaN~~w~~ 201 (389)
T 3s5s_A 137 DITITTGSPERAEEAARRAAAMGFRALKVKVGGR---------------LAASDPARIEAIHAAAPGASLILDGNGGLTA 201 (389)
T ss_dssp CEEECSSCSHHHHHHHHHHHHHTCCEEEEECCGG---------------GTTTHHHHHHHHHHHCTTCEEEEECTTCSCH
T ss_pred EeeecCCCHHHHHHHHHHHHHcCCCeEEEEecCC---------------ChHHHHHHHHHHHHhCCCCeEEEECCCCCCH
Confidence 34556677888877776654 4999999876532 1333445677777766 44566666667999
Q ss_pred HHHHHHHHHH--HHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRI--EKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l--~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++++++++.+ ++.++.+| +| +..+.|++..+++++.+++||.+.=.+.+..++.++++...+|.|++-
T Consensus 202 ~~A~~~~~~L~~~~~~i~~i-------Ee-P~~~~d~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k 271 (389)
T 3s5s_A 202 GEALALVAHARRLGADVALL-------EQ-PVPRDDWDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIK 271 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-------EC-CSCTTCHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHHHhhCCCCeEEE-------EC-CCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEec
Confidence 9999999999 55555444 12 234558999999999999999999899999999999976668888774
No 257
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=97.51 E-value=0.00068 Score=59.10 Aligned_cols=102 Identities=12% Similarity=0.166 Sum_probs=65.8
Q ss_pred HHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCC-----CCcCCHHH-HHHHHHhc-C
Q 020428 130 LIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRP-----RDPAKWGE-IADIVAAL-S 202 (326)
Q Consensus 130 ~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~-----~~~~~~~~-i~~i~~~~-~ 202 (326)
.+.+.++..++. ++.+.+-+. ...+ .+.+.+.|.+.|-++.+..-+.. ..+.+.+. .+.+++.. +
T Consensus 99 e~~~~~~~a~~~-Gl~~iv~v~--~~~e-----~~~~~~~~~~~i~~~~~~~iGtG~~~~t~~~~~~~~~~~~ir~~~~~ 170 (219)
T 2h6r_A 99 DIEAVINKCKNL-GLETIVCTN--NINT-----SKAVAALSPDCIAVEPPELIGTGIPVSKANPEVVEGTVRAVKEINKD 170 (219)
T ss_dssp HHHHHHHHHHHH-TCEEEEEES--SSHH-----HHHHTTTCCSEEEECCCC--------------CSHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHC-CCeEEEEeC--CchH-----HHHHHhCCCCEEEEEeccccccCCCCccCCHHHHHHHHHHHHhccCC
Confidence 466677766554 665555553 2221 34556678899989887642111 11211333 34444444 7
Q ss_pred CcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 203 IPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 203 iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
+||++.|||.+++++..+. ..|+|||.||++++.-++
T Consensus 171 ~~ii~ggGI~~~~~~~~~~-~~gaDgvlVGsAi~~~~d 207 (219)
T 2h6r_A 171 VKVLCGAGISKGEDVKAAL-DLGAEGVLLASGVVKAKN 207 (219)
T ss_dssp CEEEECSSCCSHHHHHHHH-TTTCCCEEESHHHHTCSS
T ss_pred CeEEEEeCcCcHHHHHHHh-hCCCCEEEEcHHHhCccc
Confidence 9999999999999999988 689999999999887544
No 258
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=97.47 E-value=0.0015 Score=62.39 Aligned_cols=123 Identities=12% Similarity=0.192 Sum_probs=92.7
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
.+++++.+.++...+ ||..+-+..|.. ++...+.++++|+++ ++.+.+-..-+|+..++++
T Consensus 187 ~~~~~~~~~a~~~~~~G~~~~K~k~g~~----------------~~~~~~~v~~vR~~~g~~~~l~vDaN~~~~~~~A~~ 250 (412)
T 4h1z_A 187 DTRAKRAELAAAWQAKGFSSFKFASPVA----------------DDGVAKEMEILRERLGPAVRIACDMHWAHTASEAVA 250 (412)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEGGGC----------------TTCHHHHHHHHHHHHCSSSEEEEECCSCCCHHHHHH
T ss_pred CcHHHHHHHHHHHHhcCcceeccccccc----------------hhhHHHHHHHHHhccCCeEEEEeccccCCCHHHHHH
Confidence 457777777666554 999988854321 122344567777776 5667777777899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+++.+++.|+.+| +| +..+.|++..+++++.+++||.+.=.+.|..|+.++++...+|.+++
T Consensus 251 ~~~~l~~~~l~~i-------Eq-P~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~ 312 (412)
T 4h1z_A 251 LIKAMEPHGLWFA-------EA-PVRTEDIDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQP 312 (412)
T ss_dssp HHHHHGGGCEEEE-------EC-CSCTTCHHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECC
T ss_pred HHHhhccccccee-------cC-CCCccchHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEe
Confidence 9999999998776 22 23455899999999999999999999999999999996555676654
No 259
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=97.46 E-value=0.00065 Score=63.75 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=73.7
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEE
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVI 206 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi 206 (326)
.++...+.++.+++....|+.+-+.... .+.++.+.++|+|.|+++.-. .. .....+.++++++.+++||+
T Consensus 79 s~e~~~~~I~~vk~~~~~pvga~ig~~~-----~e~a~~l~eaGad~I~ld~a~---G~-~~~~~~~i~~i~~~~~~~Vi 149 (361)
T 3khj_A 79 DMESQVNEVLKVKNSGGLRVGAAIGVNE-----IERAKLLVEAGVDVIVLDSAH---GH-SLNIIRTLKEIKSKMNIDVI 149 (361)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECTTC-----HHHHHHHHHTTCSEEEECCSC---CS-BHHHHHHHHHHHHHCCCEEE
T ss_pred CHHHHHHHHHHHHhccCceEEEEeCCCH-----HHHHHHHHHcCcCeEEEeCCC---CC-cHHHHHHHHHHHHhcCCcEE
Confidence 5777888899998877888888875432 678899999999999986321 00 11124678888888899998
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+ |++.|+++++.+. +.|||+|.+|
T Consensus 150 v-g~v~t~e~A~~l~-~aGaD~I~VG 173 (361)
T 3khj_A 150 V-GNVVTEEATKELI-ENGADGIKVG 173 (361)
T ss_dssp E-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred E-ccCCCHHHHHHHH-HcCcCEEEEe
Confidence 7 6789999999998 6999999996
No 260
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=97.46 E-value=0.00028 Score=61.32 Aligned_cols=151 Identities=11% Similarity=0.147 Sum_probs=97.4
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCcccc----cc-----ccccccccCChHHHHH------------
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFS----VS-----GGMGAALLSKPELIHD------------ 133 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~----~~-----~~~G~~l~~~p~~~~~------------ 133 (326)
.|++.=|-+.++++....++.+.+ |++.||+.+-.|..-. .+ ---|+.-..+++.+.+
T Consensus 13 ~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivsP 92 (217)
T 3lab_A 13 KPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVSP 92 (217)
T ss_dssp CSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEES
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEeC
Confidence 478887889999999999998887 8999999876654110 00 0111222224444443
Q ss_pred -----HHHHHhhcccC------cEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-
Q 020428 134 -----ILTMLKRNLDV------PVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL- 201 (326)
Q Consensus 134 -----iv~~v~~~~~~------pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~- 201 (326)
+++..++. ++ |+.--+ .+.+.+..+.++|+|.|-++.-.. .+ ..++++.++.-+
T Consensus 93 ~~~~evi~~~~~~-~v~~~~~~~~~PG~-------~TptE~~~A~~~Gad~vK~FPa~~----~g--G~~~lkal~~p~p 158 (217)
T 3lab_A 93 GLTPELIEKAKQV-KLDGQWQGVFLPGV-------ATASEVMIAAQAGITQLKCFPASA----IG--GAKLLKAWSGPFP 158 (217)
T ss_dssp SCCHHHHHHHHHH-HHHCSCCCEEEEEE-------CSHHHHHHHHHTTCCEEEETTTTT----TT--HHHHHHHHHTTCT
T ss_pred CCcHHHHHHHHHc-CCCccCCCeEeCCC-------CCHHHHHHHHHcCCCEEEECcccc----cc--CHHHHHHHHhhhc
Confidence 33333322 44 554444 123445666889999998764211 11 257888888766
Q ss_pred CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 202 SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 202 ~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
++|++..|||. ++.+.+.+ ..|+..+..| ..+..|.+..
T Consensus 159 ~i~~~ptGGI~-~~N~~~~l-~aGa~~~vgG-s~l~~~~~i~ 197 (217)
T 3lab_A 159 DIQFCPTGGIS-KDNYKEYL-GLPNVICAGG-SWLTESKLLI 197 (217)
T ss_dssp TCEEEEBSSCC-TTTHHHHH-HSTTBCCEEE-SGGGCHHHHH
T ss_pred CceEEEeCCCC-HHHHHHHH-HCCCEEEEEC-hhhcChhHHh
Confidence 69999999998 89999999 6899887665 4455555544
No 261
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=97.42 E-value=0.00083 Score=61.23 Aligned_cols=91 Identities=9% Similarity=0.133 Sum_probs=66.2
Q ss_pred HHHHHHHHhhcccC-cEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEE
Q 020428 131 IHDILTMLKRNLDV-PVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIA 207 (326)
Q Consensus 131 ~~~iv~~v~~~~~~-pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~ 207 (326)
+.+-++++++..+. ++.+-+. +.+.++.+.++|+|+|-++. .+.+.++++++.+ ++||.+
T Consensus 195 i~~ai~~~r~~~~~~kI~vev~-------tlee~~eA~~aGaD~I~ld~----------~~~e~l~~~v~~~~~~~~I~A 257 (296)
T 1qap_A 195 VRQAVEKAFWLHPDVPVEVEVE-------NLDELDDALKAGADIIMLDN----------FNTDQMREAVKRVNGQARLEV 257 (296)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES-------SHHHHHHHHHTTCSEEEESS----------CCHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHHHhCCCCcEEEEeC-------CHHHHHHHHHcCCCEEEECC----------CCHHHHHHHHHHhCCCCeEEE
Confidence 45566666666532 5555442 12445555688999998874 3567777777766 699999
Q ss_pred eCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 208 NGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 208 nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
+||| |.+.+.++. .+|+|++.+|+....-|+
T Consensus 258 SGGI-t~~~i~~~a-~~GvD~isvGsli~~a~~ 288 (296)
T 1qap_A 258 SGNV-TAETLREFA-ETGVDFISVGALTKHVRA 288 (296)
T ss_dssp CCCS-CHHHHHHHH-HTTCSEEECSHHHHEEEC
T ss_pred ECCC-CHHHHHHHH-HcCCCEEEEeHHHcCCCC
Confidence 9999 999999999 699999999996555554
No 262
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=97.41 E-value=0.00096 Score=58.89 Aligned_cols=132 Identities=6% Similarity=0.036 Sum_probs=85.8
Q ss_pred EEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--------cCcEEEEe
Q 020428 79 VFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--------DVPVTCKI 150 (326)
Q Consensus 79 ~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--------~~pv~vK~ 150 (326)
-+-|..++|+.+.+.+.. .|+|+|-+|.+.. +.+.+.++.+++.. +..+.+-+
T Consensus 73 DvhLMv~~p~~~i~~~~~--aGAd~itvH~ea~-----------------~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l 133 (237)
T 3cu2_A 73 DVHLMVRNQLEVAKAVVA--NGANLVTLQLEQY-----------------HDFALTIEWLAKQKTTYANQVYPVLIGACL 133 (237)
T ss_dssp EEEEECSCHHHHHHHHHH--TTCSEEEEETTCT-----------------TSHHHHHHHHTTCEEEETTEEEECEEEEEE
T ss_pred CeEEEEECHHHHHHHHHH--cCCCEEEEecCCc-----------------ccHHHHHHHHHhcccccccccCCceEEEEE
Confidence 566777899887776543 3899999987532 12345677776541 33344444
Q ss_pred cCCCChHHHHHHHHHHHHcCCcEEEE---eecccCCCCCCcCCHHHHHHHHHhc-----CCcEEEeCCCCCHHHHHHHHH
Q 020428 151 RLLKSSQDTVELARRIEKTGVSALAV---HGRKVADRPRDPAKWGEIADIVAAL-----SIPVIANGDVFEYDDFQRIKT 222 (326)
Q Consensus 151 r~g~~~~~~~e~a~~l~~~G~d~i~v---h~r~~~~~~~~~~~~~~i~~i~~~~-----~iPVi~nGgI~s~~d~~~~l~ 222 (326)
... +..+.++.+. .++|.|.+ +.....|.. .+...+.++++++.. ++||.+-|||+ .+.+..+.
T Consensus 134 ~p~----Tp~~~l~~~l-~~~D~vlvMsv~pgfggq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-~~~~~~~~- 205 (237)
T 3cu2_A 134 CPE----TPISELEPYL-DQIDVIQLLTLDPRNGTKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSMT-LELAKYFK- 205 (237)
T ss_dssp CTT----SCGGGGTTTT-TTCSEEEEESEETTTTEECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-HHHHHHHH-
T ss_pred eCC----ChHHHHHHHh-hcCceeeeeeeccCcCCeec-ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-HHHHHHHH-
Confidence 322 2222222222 27999865 555444433 333466677777665 69999999997 78888888
Q ss_pred h--cCCcEEEeccchhc
Q 020428 223 A--AGASSVMAARGALW 237 (326)
Q Consensus 223 ~--~Gad~VmiGr~~l~ 237 (326)
. .|||++.+||+++.
T Consensus 206 ~~~aGad~~VvGSaIf~ 222 (237)
T 3cu2_A 206 QGTHQIDWLVSGSALFS 222 (237)
T ss_dssp HSSSCCCCEEECGGGGS
T ss_pred HhCCCCcEEEEeeHHhC
Confidence 8 89999999999665
No 263
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=97.39 E-value=0.0017 Score=57.88 Aligned_cols=96 Identities=20% Similarity=0.198 Sum_probs=72.5
Q ss_pred HHHHhhcccCcEEEEecC-----CC--ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE
Q 020428 135 LTMLKRNLDVPVTCKIRL-----LK--SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA 207 (326)
Q Consensus 135 v~~v~~~~~~pv~vK~r~-----g~--~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~ 207 (326)
.+++++. +.+|..-+.. |+ . .+..++|+.++++|+++|+|-. -...+. ...+.+..+++.+++||+.
T Consensus 38 ~~al~~~-~~~~IaE~k~aSPskg~i~~-~~p~~~A~~~~~~GA~~isvlt--~~~~f~--G~~~~l~~i~~~v~lPvl~ 111 (254)
T 1vc4_A 38 KEALLRP-GLSVIAEVKRQSPSEGLIRE-VDPVEAALAYARGGARAVSVLT--EPHRFG--GSLLDLKRVREAVDLPLLR 111 (254)
T ss_dssp HHHHTSS-SCEEEEEECSCCTTTCCCCS-CCHHHHHHHHHHTTCSEEEEEC--CCSSSC--CCHHHHHHHHHHCCSCEEE
T ss_pred HHHHhhc-CCcEEeeecCCCcCCCcCCC-CCHHHHHHHHHHcCCCEEEEec--chhhhc--cCHHHHHHHHHhcCCCEEE
Confidence 3444433 5666654432 32 3 5789999999999999998832 222222 2467888999999999999
Q ss_pred eCCCCCHHHHHHHHHhcCCcEEEeccchhc
Q 020428 208 NGDVFEYDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 208 nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
-+.|.+..++..++ ..|||+|.++...+.
T Consensus 112 kdfI~d~~qi~~a~-~~GAD~VlL~~~~l~ 140 (254)
T 1vc4_A 112 KDFVVDPFMLEEAR-AFGASAALLIVALLG 140 (254)
T ss_dssp ESCCCSHHHHHHHH-HTTCSEEEEEHHHHG
T ss_pred CCcCCCHHHHHHHH-HcCCCEEEECccchH
Confidence 99999999999888 699999999999887
No 264
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=97.38 E-value=0.0018 Score=57.75 Aligned_cols=157 Identities=18% Similarity=0.220 Sum_probs=96.8
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeCceeccc-ccccccccccccCcccccccCCccee---eeccc-CCCCcEEEEE-CCC
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGEEIIDHK-LLKCERRVNEYIGSTDFVEKGTDSVV---FRTCH-QERNHVVFQM-GTS 85 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te~i~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~p~~vQl-~g~ 85 (326)
|.+.-|..+.+++.+.|++.++++-..... +.+ .+.....+ ..++ -.... ....++++-+ ||+
T Consensus 21 ~~tayD~~sA~l~e~aG~d~ilvGdsl~~~~lG~------~dt~~vtl-----demi~h~~aV~r~~~~~~vvaD~pfgs 89 (264)
T 1m3u_A 21 TITAYDYSFAKLFADEGLNVMLVGDSLGMTVQGH------DSTLPVTV-----ADIAYHTAAVRRGAPNCLLLADLPFMA 89 (264)
T ss_dssp EEECCSHHHHHHHHHHTCCEEEECTTHHHHTTCC------SSSTTCCH-----HHHHHHHHHHHHHCTTSEEEEECCTTS
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCC------CCCCCcCH-----HHHHHHHHHHHhhCCCCcEEEECCCCC
Confidence 346669999999999999999886322211 111 00000000 0100 00111 1223566666 332
Q ss_pred --CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC----------
Q 020428 86 --DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL---------- 152 (326)
Q Consensus 86 --~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~---------- 152 (326)
++++..+.+.++.+ |+++|.|--| +...+.|+++.++ ++||.--+.+
T Consensus 90 y~~~~~a~~~a~rl~kaGa~aVklEgg-------------------~e~~~~I~al~~a-gipV~gHiGLtPq~v~~~gg 149 (264)
T 1m3u_A 90 YATPEQAFENAATVMRAGANMVKIEGG-------------------EWLVETVQMLTER-AVPVCGHLGLTPQSVNIFGG 149 (264)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEECCCS-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHTS
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEECCc-------------------HHHHHHHHHHHHC-CCCeEeeecCCceeecccCC
Confidence 67777776666655 9999998643 2345556666554 7888733222
Q ss_pred ----CCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeC
Q 020428 153 ----LKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANG 209 (326)
Q Consensus 153 ----g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nG 209 (326)
+.+. ++.++-|+.++++|++.|.+.+. | -+..++|.+.+++|+|+-|
T Consensus 150 f~v~grt~~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~it~~l~iP~igIG 203 (264)
T 1m3u_A 150 YKVQGRGDEAGDQLLSDALALEAAGAQLLVLECV--------P--VELAKRITEALAIPVIGIG 203 (264)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHTCCEEEEESC--------C--HHHHHHHHHHCSSCEEEES
T ss_pred eEEEeCCHHHHHHHHHHHHHHHHCCCcEEEEecC--------C--HHHHHHHHHhCCCCEEEeC
Confidence 2232 46888899999999999999764 1 3678899999999999866
No 265
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=97.38 E-value=0.00097 Score=61.92 Aligned_cols=97 Identities=13% Similarity=0.175 Sum_probs=70.6
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcC--CcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCc
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTG--VSALAVHGRKVADRPRDPAKWGEIADIVAALSIP 204 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G--~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iP 204 (326)
+++...++++.+++. +.|+++.+ +... +..+.++.+.++| ++.|.++.. +. .....|+.++++++.++.|
T Consensus 79 ~~~~~~~~i~~~~~~-g~~v~v~~--g~~~-~~~~~a~~~~~~g~~~~~i~i~~~---~G-~~~~~~~~i~~lr~~~~~~ 150 (336)
T 1ypf_A 79 QPEKRISFIRDMQSR-GLIASISV--GVKE-DEYEFVQQLAAEHLTPEYITIDIA---HG-HSNAVINMIQHIKKHLPES 150 (336)
T ss_dssp SGGGHHHHHHHHHHT-TCCCEEEE--CCSH-HHHHHHHHHHHTTCCCSEEEEECS---SC-CSHHHHHHHHHHHHHCTTS
T ss_pred CCHHHHHHHHHHHhc-CCeEEEeC--CCCH-HHHHHHHHHHhcCCCCCEEEEECC---CC-CcHHHHHHHHHHHHhCCCC
Confidence 344556667776653 66788774 4443 3556788899999 999988642 11 2234688999999998756
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++..|.|.|.++++.+. +.|||+|.++
T Consensus 151 ~vi~G~v~s~e~A~~a~-~aGad~Ivvs 177 (336)
T 1ypf_A 151 FVIAGNVGTPEAVRELE-NAGADATKVG 177 (336)
T ss_dssp EEEEEEECSHHHHHHHH-HHTCSEEEEC
T ss_pred EEEECCcCCHHHHHHHH-HcCCCEEEEe
Confidence 66667799999999999 6999999994
No 266
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=97.37 E-value=0.00057 Score=61.68 Aligned_cols=91 Identities=16% Similarity=0.193 Sum_probs=63.9
Q ss_pred HHHHHHHhhccc--CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-----CCc
Q 020428 132 HDILTMLKRNLD--VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-----SIP 204 (326)
Q Consensus 132 ~~iv~~v~~~~~--~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-----~iP 204 (326)
.+-++++++..+ .++.+-+. + .+.++.+.++|+|+|-++.. +.+.++++++.+ ++|
T Consensus 169 ~~ai~~~r~~~~~~~~i~vev~---t----lee~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~~~~ 231 (273)
T 2b7n_A 169 KSFLTHARKNLPFTAKIEIECE---S----FEEAKNAMNAGADIVMCDNL----------SVLETKEIAAYRDAHYPFVL 231 (273)
T ss_dssp HHHHHHHGGGSCTTCCEEEEES---S----HHHHHHHHHHTCSEEEEETC----------CHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHHHHhCCCCceEEEEcC---C----HHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCcE
Confidence 455667776653 35565442 1 23345555689999998752 245555554443 399
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
|.++||| |++.+.++. .+|+|++.+|+.....|++
T Consensus 232 i~AsGGI-~~~ni~~~~-~aGaD~i~vGs~i~~a~~~ 266 (273)
T 2b7n_A 232 LEASGNI-SLESINAYA-KSGVDAISVGALIHQATFI 266 (273)
T ss_dssp EEEESSC-CTTTHHHHH-TTTCSEEECTHHHHTCCCC
T ss_pred EEEECCC-CHHHHHHHH-HcCCcEEEEcHHhcCCCCC
Confidence 9999999 899999999 6999999999987765653
No 267
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=97.35 E-value=0.0048 Score=57.06 Aligned_cols=125 Identities=11% Similarity=0.141 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHH-hhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
.+++++.+.++. +..|+..+.+..|. .+++.-.+.++++|+.+ ++.+.+-..-+|+.+++++
T Consensus 115 ~~~e~~~~~a~~~~~~G~~~~KiKvg~---------------~~~~~d~~~v~avr~~~g~~~~L~vDaN~~~~~~~A~~ 179 (332)
T 2ozt_A 115 GSGQAALEQWQQSWQRGQTTFKWKVGV---------------MSPEEEQAILKALLAALPPGAKLRLDANGSWDRATANR 179 (332)
T ss_dssp CTGGGHHHHHHHHHHTTCCEEEEECSS---------------SCHHHHHHHHHHHHHHSCTTCEEEEECTTCCCHHHHHH
T ss_pred CChHHHHHHHHHHHHcCCcEEEEEeCC---------------CChHHHHHHHHHHHHHcCCCCEEEEcccCCCCHHHHHH
Confidence 456666555554 44599998887652 23555667788898887 3566666666799999999
Q ss_pred HHHHHHHc---CCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 162 LARRIEKT---GVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 162 ~a~~l~~~---G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++.+++. ++.+| +|. ..+.|++..+++++.+++||.+.=.+.+..++.++++...+|.+++=
T Consensus 180 ~~~~l~~~~~~~i~~i-------EqP-~~~~d~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik 245 (332)
T 2ozt_A 180 WFAWLDRHGNGKIEYV-------EQP-LPPDQWQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIK 245 (332)
T ss_dssp HHHHHHHHCCTTEEEE-------ECC-SCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHhhccCCccee-------ECC-CCCCCHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEC
Confidence 99999998 66654 222 23558999999999999999999899999999999954345766653
No 268
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=97.33 E-value=0.00016 Score=63.43 Aligned_cols=147 Identities=11% Similarity=0.114 Sum_probs=90.3
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccc--c--cc-------ccccccccCChHHHHHHHHHH------
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSF--S--VS-------GGMGAALLSKPELIHDILTML------ 138 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~--~--~~-------~~~G~~l~~~p~~~~~iv~~v------ 138 (326)
|++.=+-+.+++++.+.++.+.+ |++.|++-+-.|... + .+ -++|. ++ +.+.+...+.+=
T Consensus 27 ~ii~V~r~~~~~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~igagt-vl-~~d~~~~A~~aGAd~v~~ 104 (225)
T 1mxs_A 27 RILPVITIAREEDILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGT-VL-DRSMFAAVEAAGAQFVVT 104 (225)
T ss_dssp SEEEEECCSCGGGHHHHHHHHHHTTCCEEEEESSSTHHHHHHHHHHHHCTTSEEEEEC-CC-SHHHHHHHHHHTCSSEEC
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHhCcccEEeeCe-Ee-eHHHHHHHHHCCCCEEEe
Confidence 56666677788888777777766 788888865433210 0 01 12343 22 333333322211
Q ss_pred ----------hhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc-CCcEE
Q 020428 139 ----------KRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL-SIPVI 206 (326)
Q Consensus 139 ----------~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~-~iPVi 206 (326)
+...++|+..-+ .+.+.+..+.+.|+|+|-++.- .+. -.+.++.++..+ ++|++
T Consensus 105 p~~d~~v~~~~~~~g~~~i~G~-------~t~~e~~~A~~~Gad~vk~FPa-------~~~~G~~~lk~i~~~~~~ipvv 170 (225)
T 1mxs_A 105 PGITEDILEAGVDSEIPLLPGI-------STPSEIMMGYALGYRRFKLFPA-------EISGGVAAIKAFGGPFGDIRFC 170 (225)
T ss_dssp SSCCHHHHHHHHHCSSCEECEE-------CSHHHHHHHHTTTCCEEEETTH-------HHHTHHHHHHHHHTTTTTCEEE
T ss_pred CCCCHHHHHHHHHhCCCEEEee-------CCHHHHHHHHHCCCCEEEEccC-------ccccCHHHHHHHHhhCCCCeEE
Confidence 111233333222 1123356667889999988541 111 257788888877 89999
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+.||| +++.+.++++..|+++|. |+++...+.+
T Consensus 171 aiGGI-~~~N~~~~l~~~Ga~~v~-gSai~~~~~i 203 (225)
T 1mxs_A 171 PTGGV-NPANVRNYMALPNVMCVG-TTWMLDSSWI 203 (225)
T ss_dssp EBSSC-CTTTHHHHHHSTTBCCEE-ECTTSCHHHH
T ss_pred EECCC-CHHHHHHHHhccCCEEEE-EchhcCchhh
Confidence 99999 478899999447999999 9998776655
No 269
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=97.32 E-value=0.0032 Score=57.55 Aligned_cols=204 Identities=13% Similarity=0.069 Sum_probs=118.3
Q ss_pred ceEEccccCCCCHHHHHHHHHcCCCeEEe-Cceeccc-ccccccccccccCcccccccCCcceeeecccCC--CCcEEEE
Q 020428 6 KLVLAPMVRVGTLPFRLLAAQYGADITYG-EEIIDHK-LLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQE--RNHVVFQ 81 (326)
Q Consensus 6 ~iilAPM~g~t~~~fr~~~~~~G~~l~~t-e~i~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~vQ 81 (326)
+.+..| +.-|..+.+++.+.|.+.+++ ....+.. +.+ .+.+...+.+. ....-...... ..|+++-
T Consensus 25 ~~i~~~--~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~------pD~~~vt~~em--~~~~~~i~r~~~~~~PviaD 94 (307)
T 3lye_A 25 ELIVCP--GVYDGLSARTAMELGFKSLYMTGAGTTASRLGQ------PDLAIAQLHDM--RDNADMIANLDPFGPPLIAD 94 (307)
T ss_dssp CCEEEE--EECSHHHHHHHHHTTCSCEEECHHHHHHHHHCC------CSSSCSCHHHH--HHHHHHHHTSSTTSCCEEEE
T ss_pred CeEEEe--cCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCC------CCCCCCCHHHH--HHHHHhhhccCCCCCcEEEE
Confidence 344544 666999999999999987764 4222211 111 11111100000 00000111111 3689988
Q ss_pred E-CC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecCC--
Q 020428 82 M-GT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRLL-- 153 (326)
Q Consensus 82 l-~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~g-- 153 (326)
+ +| .+++...+.++.+.+ |+.+|.|--+.. ++.+..-.|..+. ..+...+-+++.+++. +.++.+--|..
T Consensus 95 ~d~Gyg~~~~v~~~v~~l~~aGaagv~iEDq~~-~k~cgh~~gk~l~-~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~ 172 (307)
T 3lye_A 95 MDTGYGGPIMVARTVEHYIRSGVAGAHLEDQIL-TKRCGHLSGKKVV-SRDEYLVRIRAAVATKRRLRSDFVLIARTDAL 172 (307)
T ss_dssp CTTCSSSHHHHHHHHHHHHHTTCCEEEECCBCC-CC--------CBC-CHHHHHHHHHHHHHHHHHTTCCCEEEEEECCH
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCeEEEEcCCCC-CcccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCeEEEEechhh
Confidence 8 33 358888888888776 999999976542 2222221233344 4444444444554432 56676666653
Q ss_pred --CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEe---CC---CCCHHHHHHHHHhc
Q 020428 154 --KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIAN---GD---VFEYDDFQRIKTAA 224 (326)
Q Consensus 154 --~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~n---Gg---I~s~~d~~~~l~~~ 224 (326)
...+++++-++.+.++|+|.|-+++. .+.+.++++.+.++ +||.+| || ..|.+ ++- +.
T Consensus 173 ~~~gldeAi~Ra~ay~eAGAD~ifi~~~---------~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~---eL~-~l 239 (307)
T 3lye_A 173 QSLGYEECIERLRAARDEGADVGLLEGF---------RSKEQAAAAVAALAPWPLLLNSVENGHSPLITVE---EAK-AM 239 (307)
T ss_dssp HHHCHHHHHHHHHHHHHTTCSEEEECCC---------SCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHH---HHH-HH
T ss_pred hccCHHHHHHHHHHHHHCCCCEEEecCC---------CCHHHHHHHHHHccCCceeEEeecCCCCCCCCHH---HHH-Hc
Confidence 23568999999999999999999864 25678889998885 898765 33 23444 344 57
Q ss_pred CCcEEEeccc
Q 020428 225 GASSVMAARG 234 (326)
Q Consensus 225 Gad~VmiGr~ 234 (326)
|+..|..+-.
T Consensus 240 Gv~~v~~~~~ 249 (307)
T 3lye_A 240 GFRIMIFSFA 249 (307)
T ss_dssp TCSEEEEETT
T ss_pred CCeEEEEChH
Confidence 9988877644
No 270
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=97.31 E-value=0.0017 Score=61.56 Aligned_cols=125 Identities=12% Similarity=0.071 Sum_probs=94.2
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
.+++.+.+.++.+.+ ||..+-+..|-+ +++.-.+.++++|+++ ++.+.+-...+|+..++++
T Consensus 163 ~~~~~~~~~~~~~~~~G~~~~Kikvg~~---------------~~~~d~~~v~avR~~~G~~~~l~vDaN~~~~~~~A~~ 227 (388)
T 4h83_A 163 EPLGSIADEMHNYQELGLAGVKFKVGGL---------------SAAEDAARITAAREAAGDDFIICIDANQGYKPAVAVD 227 (388)
T ss_dssp CTTCSHHHHHHHHHHHTBSEEEEECSSS---------------CHHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCceEeecCCCC---------------CHHHHHHHHHHHHHhcCCCeEEEEecCcCCCHHHHHH
Confidence 345666666666555 999998876422 3444456678888877 5677777777899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+++.+++.++.+|- |......+++..+++++.+++||.+.=.+.|..++.++++...+|.|++
T Consensus 228 ~~~~l~~~~~~~iE-------eP~~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~ 290 (388)
T 4h83_A 228 LSRRIADLNIRWFE-------EPVEWHNDKRSMRDVRYQGSVPVCAGQTEFSASGCRDLMETGAIDVCNF 290 (388)
T ss_dssp HHHHTTTSCCCCEE-------SCBCSTTHHHHHHHHHHHSSSCEEECTTCSSHHHHHHHHHHTCCSEECC
T ss_pred HHHHhhhcCcceee-------cCcccccchHHHHHHHhhcCCCccCCccccChHhHHHHHHcCCCCeEee
Confidence 99999999988762 2211123577889999999999999999999999999997656787755
No 271
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=97.29 E-value=0.0023 Score=58.83 Aligned_cols=121 Identities=12% Similarity=0.081 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. . +..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg-~-~t~~ai~ 97 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCG----------NTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG-Y-ATSTAIE 97 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC-c-CHHHHHH
Confidence 477888888887765 999987763 234444445666677777776665 589999885 3 8899999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+++++||+ +| |--.+++.+.++.
T Consensus 98 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La 158 (316)
T 3e96_A 98 LGNAAKAAGADAVMIHMP----IHPYVTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLA 158 (316)
T ss_dssp HHHHHHHHTCSEEEECCC----CCSCCCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHH
Confidence 999999999999987532 222222 24566788888899986 77 6556677777665
No 272
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=97.27 E-value=0.0015 Score=58.31 Aligned_cols=194 Identities=12% Similarity=0.050 Sum_probs=117.1
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeCce-ecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEE-C--CCCH
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGEEI-IDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQM-G--TSDA 87 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te~i-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl-~--g~~~ 87 (326)
|.+.-|..+.+++.+.|++.+++.-- .+..+.+ .+.....+-+. ....-..+...+.|+++-+ + |+++
T Consensus 24 ~~~ayD~~sA~~~~~aG~dai~vg~~s~a~~~G~------pD~~~vt~~em--~~~~~~I~r~~~~pviaD~~~Gyg~~~ 95 (255)
T 2qiw_A 24 LPTVWDTWSAGLVEEAGFSGLTIGSHPVADATGS------SDGENMNFADY--MAVVKKITSAVSIPVSVDVESGYGLSP 95 (255)
T ss_dssp CCEESSHHHHHHHHHTTCSCEEECHHHHHHHTTC------CTTTCSCHHHH--HHHHHHHHHHCSSCEEEECTTCTTCCH
T ss_pred EecCcCHHHHHHHHHcCCCEEEEChHHHHHhCCC------CCCCCcCHHHH--HHHHHHHHhcCCCCEEeccCCCcCcHH
Confidence 34667999999999999988876621 1112211 11111100000 0000011112236899888 3 4455
Q ss_pred HHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecCC-----CC---
Q 020428 88 VRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRLL-----KS--- 155 (326)
Q Consensus 88 ~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~g-----~~--- 155 (326)
.+.++.+.+ |+++|.|--+... .|. -+-..+...+-|++++++. ++|+.|--|.+ .+
T Consensus 96 ---~~~~~~l~~aGa~gv~iEd~~~~-------~~k-~l~~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~ 164 (255)
T 2qiw_A 96 ---ADLIAQILEAGAVGINVEDVVHS-------EGK-RVREAQEHADYIAAARQAADVAGVDVVINGRTDAVKLGADVFE 164 (255)
T ss_dssp ---HHHHHHHHHTTCCEEEECSEEGG-------GTT-EECCHHHHHHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSS
T ss_pred ---HHHHHHHHHcCCcEEEECCCCCC-------CCC-cccCHHHHHHHHHHHHHHHHhcCCCeEEEEEechhhccCCcch
Confidence 555555444 9999999755311 122 2335566667777776653 67866666643 22
Q ss_pred --hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe--CCCCCH-HHHHHHHHhcCCcEEE
Q 020428 156 --SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN--GDVFEY-DDFQRIKTAAGASSVM 230 (326)
Q Consensus 156 --~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n--GgI~s~-~d~~~~l~~~Gad~Vm 230 (326)
.+++++-++.++++|+|.|.+++. .+.+.++++.+.+++|+-.+ ++-.|+ -+..++- +.|+..|.
T Consensus 165 ~~~~~ai~ra~a~~eAGAd~i~~e~~---------~~~~~~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~-~lGv~~v~ 234 (255)
T 2qiw_A 165 DPMVEAIKRIKLMEQAGARSVYPVGL---------STAEQVERLVDAVSVPVNITAHPVDGHGAGDLATLA-GLGVRRVT 234 (255)
T ss_dssp SHHHHHHHHHHHHHHHTCSEEEECCC---------CSHHHHHHHHTTCSSCBEEECBTTTBBTTBCHHHHH-HTTCCEEE
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCC---------CCHHHHHHHHHhCCCCEEEEecCCCCCCCCCHHHHH-HcCCCEEE
Confidence 467899999999999999999764 35688999999999998766 333111 1233444 68999999
Q ss_pred eccc
Q 020428 231 AARG 234 (326)
Q Consensus 231 iGr~ 234 (326)
.|-.
T Consensus 235 ~~~~ 238 (255)
T 2qiw_A 235 FGPL 238 (255)
T ss_dssp CTTH
T ss_pred EHHH
Confidence 8865
No 273
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=97.23 E-value=0.0073 Score=52.16 Aligned_cols=136 Identities=13% Similarity=0.054 Sum_probs=85.1
Q ss_pred cEEEEE-CCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCC
Q 020428 77 HVVFQM-GTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKS 155 (326)
Q Consensus 77 p~~vQl-~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~ 155 (326)
++++-+ .+..|+.+.+. .+..|+|.|-+|.... .+.+.++++.+++. +.++.+++-...+
T Consensus 58 ~v~lD~kl~dip~t~~~~--~~~~Gad~itvh~~~g----------------~~~l~~~~~~~~~~-g~~~~~~ll~~~t 118 (216)
T 1q6o_A 58 IVLADAKIADAGKILSRM--CFEANADWVTVICCAD----------------INTAKGALDVAKEF-NGDVQIELTGYWT 118 (216)
T ss_dssp EEEEEEEECSCHHHHHHH--HHHTTCSEEEEETTSC----------------HHHHHHHHHHHHHT-TCEEEEEECSCCC
T ss_pred eEEEEEEecccHHHHHHH--HHhCCCCEEEEeccCC----------------HHHHHHHHHHHHHc-CCCceeeeeeCCC
Confidence 455443 23457777662 2334999999986321 23355666666653 6776665531333
Q ss_pred hHHHHHHHHHHHHcCCcEEEEee-c-ccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 156 SQDTVELARRIEKTGVSALAVHG-R-KVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~-r-~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
.+ -++.+++.|.+.+.+|- + +...+..+ ..+.++.+++.. ++||++.|||+ ++.+.+++ +.|||++.+
T Consensus 119 -~~---~~~~l~~~~~~~~vl~~a~~~~~~G~~g--~~~~i~~lr~~~~~~~~i~v~GGI~-~~~~~~~~-~aGad~ivv 190 (216)
T 1q6o_A 119 -WE---QAQQWRDAGIGQVVYHRSRDAQAAGVAW--GEADITAIKRLSDMGFKVTVTGGLA-LEDLPLFK-GIPIHVFIA 190 (216)
T ss_dssp -HH---HHHHHHHTTCCEEEEECCHHHHHTTCCC--CHHHHHHHHHHHHTTCEEEEESSCC-GGGGGGGT-TSCCSEEEE
T ss_pred -hh---hHHHHHhcCcHHHHHHHHHHHHhcCCCC--CHHHHHHHHHhcCCCCcEEEECCcC-hhhHHHHH-HcCCCEEEE
Confidence 22 23455566887777752 2 11122222 356667777655 68899999998 78888888 689999999
Q ss_pred ccchhcCc
Q 020428 232 ARGALWNA 239 (326)
Q Consensus 232 Gr~~l~~P 239 (326)
||+++..+
T Consensus 191 G~~I~~a~ 198 (216)
T 1q6o_A 191 GRSIRDAA 198 (216)
T ss_dssp SHHHHTSS
T ss_pred eehhcCCC
Confidence 99987643
No 274
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=97.21 E-value=0.0055 Score=57.96 Aligned_cols=129 Identities=12% Similarity=0.229 Sum_probs=95.6
Q ss_pred cEEEEECCCC-HHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCC
Q 020428 77 HVVFQMGTSD-AVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~-~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g 153 (326)
|+-..++..+ ++++.+.++... +||..+-+..| | ..+. +.++++|+.+ ++.+.+-..-+
T Consensus 139 ~~~~~~~~~~~~e~~~~~~~~~~~~G~~~~K~Kv~-~-------------~~d~----~~v~avR~~~~~~~l~vDaN~~ 200 (388)
T 3qld_A 139 EVSATLGMSESLDVLIQSVDAAVEQGFRRVKLKIA-P-------------GRDR----AAIKAVRLRYPDLAIAADANGS 200 (388)
T ss_dssp EBEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECB-T-------------TBSH----HHHHHHHHHCTTSEEEEECTTC
T ss_pred EEeEEecCCCCHHHHHHHHHHHHHhCCCeEEEEeC-c-------------HHHH----HHHHHHHHHCCCCeEEEECCCC
Confidence 4555665554 888887777654 59999988764 1 1233 4566666665 55666766668
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
|+..++.. ++.+++.++.+| ++ +..+.|++..+++++.+++||.+.=.+.+..++.++++...+|.|++-
T Consensus 201 ~~~~~A~~-~~~l~~~~i~~i-------Ee-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k 270 (388)
T 3qld_A 201 YRPEDAPV-LRQLDAYDLQFI-------EQ-PLPEDDWFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVK 270 (388)
T ss_dssp CCGGGHHH-HHHGGGGCCSCE-------EC-CSCTTCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred CChHHHHH-HHHHhhCCCcEE-------EC-CCCcccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEEC
Confidence 99888876 888998887766 22 234557899999999999999998899999999999976668988875
No 275
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=97.19 E-value=0.0059 Score=55.59 Aligned_cols=204 Identities=13% Similarity=0.089 Sum_probs=118.5
Q ss_pred eEEccccCCCCHHHHHHHHHcCCCeEEe-Cceec-ccccccccccccccCcccccccCCcceeeecccC-CCCcEEEEE-
Q 020428 7 LVLAPMVRVGTLPFRLLAAQYGADITYG-EEIID-HKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQ-ERNHVVFQM- 82 (326)
Q Consensus 7 iilAPM~g~t~~~fr~~~~~~G~~l~~t-e~i~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~vQl- 82 (326)
.++.| +.-|..+.+++.+.|.+.+++ ....+ ..+.+ .+.+...+.+- ....-..... ...|+++-+
T Consensus 19 ~i~~~--~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~------pD~~~vt~~em--~~~~~~I~~~~~~~PviaD~d 88 (302)
T 3fa4_A 19 FIVAP--GVYDGLSARVALSAGFDALYMTGAGTAASVHGQ------ADLGICTLNDM--RANAEMISNISPSTPVIADAD 88 (302)
T ss_dssp CEEEE--EECSHHHHHHHHTTTCSCEEECHHHHHHHHHSC------CSSSCCCHHHH--HHHHHHHHTTSTTSCEEEECT
T ss_pred eEEEe--cCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCC------CCCCcCCHHHH--HHHHHHHHhhccCCCEEEECC
Confidence 34444 666999999999999987764 42221 11111 11111110000 0000011111 256899888
Q ss_pred CC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecCC----
Q 020428 83 GT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRLL---- 153 (326)
Q Consensus 83 ~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~g---- 153 (326)
+| .+++...+.++.+.+ |+.+|.|.-... ++.+..-.|..+.. .+...+=|++.+++. +.++.+--|..
T Consensus 89 ~Gyg~~~~v~~tv~~l~~aGaagv~iEDq~~-~Krcgh~~gk~l~~-~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~ 166 (302)
T 3fa4_A 89 TGYGGPIMVARTTEQYSRSGVAAFHIEDQVQ-TKRCGHLAGKILVD-TDTYVTRIRAAVQARQRIGSDIVVIARTDSLQT 166 (302)
T ss_dssp TTTSSHHHHHHHHHHHHHTTCCEEEECSBCC-C-------CCCBCC-HHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCcEEEECCCCC-CcccCCCCCCeecC-HHHHHHHHHHHHHHHHhcCCCEEEEEEeccccc
Confidence 33 368888888888776 999999975532 22222222334444 444444344444432 55666666652
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEe---CC---CCCHHHHHHHHHhcCC
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIAN---GD---VFEYDDFQRIKTAAGA 226 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~n---Gg---I~s~~d~~~~l~~~Ga 226 (326)
...+++++-++.+.++|+|.|-+++. .+.+.++++.+.+ +.|+.+| || ..|.++ +- +.|+
T Consensus 167 ~gldeAi~Ra~ay~eAGAD~ifi~g~---------~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~e---L~-~lGv 233 (302)
T 3fa4_A 167 HGYEESVARLRAARDAGADVGFLEGI---------TSREMARQVIQDLAGWPLLLNMVEHGATPSISAAE---AK-EMGF 233 (302)
T ss_dssp HCHHHHHHHHHHHHTTTCSEEEETTC---------CCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHH---HH-HHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEeecCC---------CCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHH---HH-HcCC
Confidence 24578999999999999999999874 2567888999888 4898775 33 234443 44 5799
Q ss_pred cEEEeccch
Q 020428 227 SSVMAARGA 235 (326)
Q Consensus 227 d~VmiGr~~ 235 (326)
..|..+-.+
T Consensus 234 ~~v~~~~~~ 242 (302)
T 3fa4_A 234 RIIIFPFAA 242 (302)
T ss_dssp SEEEETTTT
T ss_pred CEEEEchHH
Confidence 888877543
No 276
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=97.17 E-value=0.0012 Score=59.53 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=63.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.+..++|+.++++|+++|.|-. +..+.+ ...+.+..+++.+++||+..+.|.++.++.++. ..|||+|.++-+++
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVlt---d~~~f~-Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~-~~GAD~VlLi~a~L 153 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLT---DTPSFQ-GAPEFLTAARQACSLPALRKDFLFDPYQVYEAR-SWGADCILIIMASV 153 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC---CSTTTC-CCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHH-HTTCSEEEEETTTS
T ss_pred CCHHHHHHHHHHCCCCEEEEec---cccccC-CCHHHHHHHHHhcCCCEEECCccCCHHHHHHHH-HcCCCEEEEccccc
Confidence 4788999999999999998753 122222 257888999999999999999999999999998 69999999998877
Q ss_pred cC
Q 020428 237 WN 238 (326)
Q Consensus 237 ~~ 238 (326)
.+
T Consensus 154 ~~ 155 (272)
T 3tsm_A 154 DD 155 (272)
T ss_dssp CH
T ss_pred CH
Confidence 54
No 277
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=97.16 E-value=0.0029 Score=59.76 Aligned_cols=121 Identities=11% Similarity=0.208 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHh-hcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 85 SDAVRALTAAKMV-CKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
.+++++.+.++.+ .+||..+-+..| | ..+. +.++++++++ ++.+.+-..-+|+.+++ ++
T Consensus 160 ~~~~~~~~~a~~~~~~G~~~~KiKvg-~-------------~~d~----~~v~avr~a~~~~~l~vDaN~~~~~~~a-~~ 220 (386)
T 1wue_A 160 EDLPQLLKQVQLAVEKGYQRVKLKIR-P-------------GYDV----EPVALIRQHFPNLPLMVDANSAYTLADL-PQ 220 (386)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECB-T-------------TBSH----HHHHHHHHHCTTSCEEEECTTCCCGGGH-HH
T ss_pred CCHHHHHHHHHHHHHhhhheEEEeeC-c-------------HHHH----HHHHHHHHhCCCCeEEEeCCCCCCHHHH-HH
Confidence 4688887666654 459998888654 2 1233 4466666665 56677777767988888 88
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++.+++.++.+|- | +..+.|++..+++++.+++||.+.=.+.|..++.++++...+|.|++=
T Consensus 221 ~~~l~~~~i~~iE-------q-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik 282 (386)
T 1wue_A 221 LQRLDHYQLAMIE-------Q-PFAADDFLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLK 282 (386)
T ss_dssp HHGGGGSCCSCEE-------C-CSCTTCSHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEEC
T ss_pred HHHHHhCCCeEEe-------C-CCCcccHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEc
Confidence 9999998887762 2 234557899999999999999998899999999999976668988874
No 278
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=97.15 E-value=0.0008 Score=56.95 Aligned_cols=100 Identities=16% Similarity=0.155 Sum_probs=70.4
Q ss_pred HHHHHHHHhhcccCcEEEEecC--CCC-hHHHHHHHHHHHHcCCcEEEEee-------cccC----C-------------
Q 020428 131 IHDILTMLKRNLDVPVTCKIRL--LKS-SQDTVELARRIEKTGVSALAVHG-------RKVA----D------------- 183 (326)
Q Consensus 131 ~~~iv~~v~~~~~~pv~vK~r~--g~~-~~~~~e~a~~l~~~G~d~i~vh~-------r~~~----~------------- 183 (326)
+.++++.++++ ++|+.+=.-+ |.+ .++.+++. +..++|+|+=+- +... |
T Consensus 45 L~~iv~~ik~~-gK~vivh~DlI~GLs~d~~ai~fL---~~~~pdGIIsTk~~~i~~Akk~GL~tIqR~FliDs~al~~~ 120 (188)
T 1vkf_A 45 LKFHLKILKDR-GKTVFVDMDFVNGLGEGEEAILFV---KKAGADGIITIKPKNYVVAKKNGIPAVLRFFALDSKAVERG 120 (188)
T ss_dssp HHHHHHHHHHT-TCEEEEEGGGEETCCSSHHHHHHH---HHHTCSEEEESCHHHHHHHHHTTCCEEEEEECCSHHHHHHH
T ss_pred HHHHHHHHHHC-CCeEEEecCcccccCCCHHHHHHH---HhcCCCEEEcCcHHHHHHHHHcCCEEeeEEEEEEeHHHhhh
Confidence 77889999888 9999998776 433 45667776 777888886320 0000 0
Q ss_pred -------------CCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 184 -------------RPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 184 -------------~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
-..++.--+.++++ +++|||+.|+|+|.||+.+ + ..||++|..|+--|++.
T Consensus 121 ~~~I~~~kPD~iEiLPg~v~p~~I~~v---~~~PiIaGGlI~t~edv~~-l-~aGA~aIsTs~~~LW~~ 184 (188)
T 1vkf_A 121 IEQIETLGVDVVEVLPGAVAPKVARKI---PGRTVIAAGLVETEEEARE-I-LKHVSAISTSSRILWKM 184 (188)
T ss_dssp HHHHHHHTCSEEEEESGGGHHHHHTTS---TTSEEEEESCCCSHHHHHH-H-TTTSSEEEECCHHHHTC
T ss_pred hhhccccCCCeEeecCCCchHHHHHHh---cCCCEEEECCcCCHHHHHH-H-HCCCeEEEeCCHHHhCC
Confidence 00012123445554 6889999999999999999 9 69999999998877754
No 279
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=97.14 E-value=0.009 Score=54.59 Aligned_cols=123 Identities=13% Similarity=0.165 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gt----------tGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 101 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGT----------TGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAHSIR 101 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHH
Confidence 477888888887765 9999988642 33333445666677777777665 578888763 256889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..- .|..+. -+++++.|.+++++||+ +| |--.+++.+.++.+
T Consensus 102 la~~a~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 167 (304)
T 3l21_A 102 LAKACAAEGAHGLLVVTP----YYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALAS 167 (304)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 999999999999988643 222222 24556788888899986 55 65667888888763
No 280
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=97.14 E-value=0.016 Score=52.00 Aligned_cols=156 Identities=18% Similarity=0.242 Sum_probs=97.2
Q ss_pred cCCCCHHHHHHHHHcCCCeEEeCceecc-cccccccccccccCcccccccCCccee---eecccCC-CCcEEEEE-CC--
Q 020428 13 VRVGTLPFRLLAAQYGADITYGEEIIDH-KLLKCERRVNEYIGSTDFVEKGTDSVV---FRTCHQE-RNHVVFQM-GT-- 84 (326)
Q Consensus 13 ~g~t~~~fr~~~~~~G~~l~~te~i~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~p~~vQl-~g-- 84 (326)
.+.-|..+.+++.+.|++.+.+...... .+.+ .+.....+ ..++ -..+... ..|+++-+ +|
T Consensus 34 ~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~------~dt~~vtl-----dem~~h~~aV~r~~~~~~vvaD~pfgsY 102 (275)
T 3vav_A 34 LTCYDASFAALLDRANVDVQLIGDSLGNVLQGQ------TTTLPVTL-----DDIAYHTACVARAQPRALIVADLPFGTY 102 (275)
T ss_dssp EECCSHHHHHHHHHTTCSEEEECTTHHHHTTCC------SSSTTCCH-----HHHHHHHHHHHHTCCSSEEEEECCTTSC
T ss_pred EeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCC------CCCCccCH-----HHHHHHHHHHHhcCCCCCEEEecCCCCC
Confidence 3667999999999999998877632211 1111 00000000 0000 0111122 35788888 55
Q ss_pred CCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC-----------
Q 020428 85 SDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL----------- 152 (326)
Q Consensus 85 ~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~----------- 152 (326)
.++++..+.+.++. .|+++|.|--| ....+.++++++. ++|+.--+.+
T Consensus 103 ~s~~~a~~~a~rl~kaGa~aVklEdg-------------------~~~~~~i~~l~~~-GIpv~gHlgltPq~~~~~gg~ 162 (275)
T 3vav_A 103 GTPADAFASAVKLMRAGAQMVKFEGG-------------------EWLAETVRFLVER-AVPVCAHVGLTPQSVHAFGGF 162 (275)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEECC-------------------GGGHHHHHHHHHT-TCCEEEEEESCGGGHHHHC--
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCc-------------------hhHHHHHHHHHHC-CCCEEEecCCCceEEeccCCe
Confidence 47888777766554 49999998643 1234556666654 7777643321
Q ss_pred ---CCCh---HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeC
Q 020428 153 ---LKSS---QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANG 209 (326)
Q Consensus 153 ---g~~~---~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nG 209 (326)
|.+. ++.++-++.++++|++.|.+-+- | -+.+++|.+.+++|+|+-|
T Consensus 163 ~vqgrt~~~a~~~i~rA~a~~eAGA~~ivlE~v--------p--~~~a~~It~~l~iP~igIG 215 (275)
T 3vav_A 163 KVQGKTEAGAAQLLRDARAVEEAGAQLIVLEAV--------P--TLVAAEVTRELSIPTIGIG 215 (275)
T ss_dssp -CCCCSHHHHHHHHHHHHHHHHHTCSEEEEESC--------C--HHHHHHHHHHCSSCEEEES
T ss_pred EEEcCCHHHHHHHHHHHHHHHHcCCCEEEecCC--------C--HHHHHHHHHhCCCCEEEEc
Confidence 2232 46888899999999999998754 1 2478899999999999765
No 281
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=97.13 E-value=0.012 Score=53.68 Aligned_cols=123 Identities=15% Similarity=0.222 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~ 98 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGT----------TGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHASID 98 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHHHH
Confidence 467788888887665 9999988642 33444445666677777776665 588887774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.+
T Consensus 99 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (301)
T 1xky_A 99 LTKKATEVGVDAVMLVAP----YYNKPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSE 164 (301)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 999999999999987643 222222 24566788888899986 55 44457888888763
No 282
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=97.12 E-value=0.00096 Score=60.95 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=62.2
Q ss_pred HHHHHHHhhccc--CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-----CCc
Q 020428 132 HDILTMLKRNLD--VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-----SIP 204 (326)
Q Consensus 132 ~~iv~~v~~~~~--~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-----~iP 204 (326)
.+-++++++..+ .++.+-+. + .+.++.+.++|+|+|-++.. +.+.++++++.+ ++|
T Consensus 184 ~~ai~~~r~~~~~~~~i~vev~---t----lee~~~A~~aGaD~I~ld~~----------~~~~l~~~v~~l~~~~~~~~ 246 (299)
T 2jbm_A 184 EKAVRAARQAADFALKVEVECS---S----LQEAVQAAEAGADLVLLDNF----------KPEELHPTATVLKAQFPSVA 246 (299)
T ss_dssp HHHHHHHHHHHTTTSCEEEEES---S----HHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHhCCcCCeEEEecC---C----HHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCee
Confidence 344555555543 45665442 1 23355555789999998752 245555544443 389
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
|.++||| |.+.+.++. .+|+|++.+|+.....|++
T Consensus 247 I~ASGGI-t~~ni~~~~-~aGaD~i~vGs~i~~a~~~ 281 (299)
T 2jbm_A 247 VEASGGI-TLDNLPQFC-GPHIDVISMGMLTQAAPAL 281 (299)
T ss_dssp EEEESSC-CTTTHHHHC-CTTCCEEECTHHHHSCCCC
T ss_pred EEEECCC-CHHHHHHHH-HCCCCEEEEChhhcCCCCc
Confidence 9999999 899999999 6999999999976555554
No 283
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=97.12 E-value=0.0096 Score=54.04 Aligned_cols=123 Identities=15% Similarity=0.180 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 86 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCG----------TTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEAIA 86 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHH
Confidence 477888888887665 999988763 234444445666677777777665 588888774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEEE------eCCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVIA------NGDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi~------nGgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..- .|..+. -++.++.|.+.+++||+. .|---+++.+.++.+
T Consensus 87 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (292)
T 2vc6_A 87 FVRHAQNAGADGVLIVSP----YYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFE 152 (292)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHh
Confidence 999999999999987643 222232 244567888889999875 354467888888874
No 284
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=97.12 E-value=0.013 Score=53.06 Aligned_cols=122 Identities=13% Similarity=0.141 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 86 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGT----------TGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEAIE 86 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHH
Confidence 477888888887665 9999988642 33444445666677777776655 578887764 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+++++||+ +| |---+++.+.++.
T Consensus 87 la~~a~~~Gadavlv~~P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 87 LSVFAEDVGADAVLSITP----YYNKPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 999999999999987643 222222 24566788888899976 55 4446788888876
No 285
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=97.11 E-value=0.0037 Score=54.48 Aligned_cols=139 Identities=9% Similarity=0.039 Sum_probs=83.6
Q ss_pred CcEEEEE-CCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhccc--CcEEEEecC
Q 020428 76 NHVVFQM-GTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLD--VPVTCKIRL 152 (326)
Q Consensus 76 ~p~~vQl-~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~--~pv~vK~r~ 152 (326)
.++++-+ +...|+.+.+++ ...|+|.+.+|..+. .+.+.+.++.+++.-. ..+.|-+-.
T Consensus 59 ~~iflDlKl~Dip~t~~~~~--~~~Gad~vtVH~~~g----------------~~~l~~a~~~~~~~g~~~~~~~Vt~lt 120 (221)
T 3exr_A 59 KIIVADTKCADAGGTVAKNN--AVRGADWMTCICSAT----------------IPTMKAARKAIEDINPDKGEIQVELYG 120 (221)
T ss_dssp SEEEEEEEECSCHHHHHHHH--HTTTCSEEEEETTSC----------------HHHHHHHHHHHHHHCTTTCEEEEECCS
T ss_pred CcEEEEEEeeccHHHHHHHH--HHcCCCEEEEeccCC----------------HHHHHHHHHHHHhcCCCcceEEEEEcC
Confidence 3566655 346688877763 334999999996432 2345556666654311 233333332
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEE
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~Vm 230 (326)
.++.+ .++.+.+.|++.+.+|--...+...-....+.++.+++.. +++|...||| +++++..+. ..|||.++
T Consensus 121 s~~~~----~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~e~~~ir~~~~~~~~i~v~gGI-~~~~~~~~~-~aGad~~V 194 (221)
T 3exr_A 121 DWTYD----QAQQWLDAGISQAIYHQSRDALLAGETWGEKDLNKVKKLIEMGFRVSVTGGL-SVDTLKLFE-GVDVFTFI 194 (221)
T ss_dssp SCCHH----HHHHHHHTTCCEEEEECCHHHHHHTCCCCHHHHHHHHHHHHHTCEEEEESSC-CGGGGGGGT-TCCCSEEE
T ss_pred CCCHH----HHHHHHcCCHHHHHHHHHHhcCCCccccCHHHHHHHHHhhcCCceEEEECCC-CHHHHHHHH-HCCCCEEE
Confidence 33333 2345566899998887322111111112234455666544 6889999999 567777777 69999999
Q ss_pred eccchhcC
Q 020428 231 AARGALWN 238 (326)
Q Consensus 231 iGr~~l~~ 238 (326)
+||++...
T Consensus 195 vG~~I~~a 202 (221)
T 3exr_A 195 AGRGITEA 202 (221)
T ss_dssp ECHHHHTS
T ss_pred ECchhhCC
Confidence 99997653
No 286
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=97.11 E-value=0.0069 Score=58.35 Aligned_cols=122 Identities=19% Similarity=0.257 Sum_probs=96.6
Q ss_pred CCHHHHHHHHHHh-hc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMV-CK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e 161 (326)
.+|+++++.|+.. .+ ||..+-+..|-. +++.-.+.++++|+++ ++++.+-..-+|+..++++
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~d~~L~vDaN~~w~~~~Ai~ 256 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVF---------------APEEEMAAVEALRAAFPDHPLRLDPNAAWTPQTSVK 256 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCcEEEECCCCCCHHHHHH
Confidence 5788888877765 44 999998876531 3455566788888876 6678888877899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++.+++. +.+| ++.. .+++..+++++.+++||.+.-.+.+..++.++++...+|.+++-
T Consensus 257 ~~~~L~~~-l~~i-------EeP~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d 316 (445)
T 3vdg_A 257 VAAGLEGV-LEYL-------EDPT---PGLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSD 316 (445)
T ss_dssp HHHHTTTT-CSEE-------ECCS---SSHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEEC
T ss_pred HHHHHhhH-HHee-------eCCC---CCHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeC
Confidence 99999988 7776 2221 37899999999999999998899999999999976668888774
No 287
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=97.09 E-value=0.016 Score=52.53 Aligned_cols=122 Identities=13% Similarity=0.134 Sum_probs=86.5
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 86 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGT----------TGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEAVH 86 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHH
Confidence 477888888887766 9999988642 33343445666677777776655 478887764 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.+++.|+|++.+..- .|..+. -++.++.|.+++++||+ +| |---+++.+.++.
T Consensus 87 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 87 LTAHAKEVGADGALVVVP----YYNKPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 999999999999987632 222232 24556788888899976 55 4446888888876
No 288
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=97.08 E-value=0.015 Score=53.40 Aligned_cols=123 Identities=16% Similarity=0.160 Sum_probs=87.0
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~eai~ 109 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVG----------TTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTREAVA 109 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHH
Confidence 477888888887665 999998864 234444445666677777776655 578888654 256889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+++++||+ +| |---+++.+.++.+
T Consensus 110 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 175 (314)
T 3qze_A 110 LTEAAKSGGADACLLVTP----YYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSK 175 (314)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 999999999999987642 222222 24567788888999986 44 55567888877763
No 289
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=97.07 E-value=0.0034 Score=55.12 Aligned_cols=99 Identities=15% Similarity=0.168 Sum_probs=72.3
Q ss_pred HHHHHHHHHhhcccCcEEEEecC--C---CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCc
Q 020428 130 LIHDILTMLKRNLDVPVTCKIRL--L---KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIP 204 (326)
Q Consensus 130 ~~~~iv~~v~~~~~~pv~vK~r~--g---~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iP 204 (326)
.+..+++.+...-+ +.|-++. + .++.+..++|+.+++.|+.+|.+. ..+.++++++.+++|
T Consensus 6 ~~~~~~~~~~~~~~--livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~------------~~~~i~~ir~~v~~P 71 (232)
T 3igs_A 6 LLEQLDKNIAASGG--LIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE------------GIDNLRMTRSLVSVP 71 (232)
T ss_dssp HHHHHHHHHHHHCC--EEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE------------SHHHHHHHHTTCCSC
T ss_pred HHHHHHHHhhhcCC--EEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC------------CHHHHHHHHHhcCCC
Confidence 45556666622223 4444454 2 346789999999999999998872 367899999999999
Q ss_pred EEE-e----CC--C---CCHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 205 VIA-N----GD--V---FEYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 205 Vi~-n----Gg--I---~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
|++ + || + .+.+++.+++ ..|||.|.++.+...+|....
T Consensus 72 vig~~k~d~~~~~~~I~~~~~~i~~~~-~~Gad~V~l~~~~~~~p~~l~ 119 (232)
T 3igs_A 72 IIGIIKRDLDESPVRITPFLDDVDALA-QAGAAIIAVDGTARQRPVAVE 119 (232)
T ss_dssp EEEECBCCCSSCCCCBSCSHHHHHHHH-HHTCSEEEEECCSSCCSSCHH
T ss_pred EEEEEeecCCCcceEeCccHHHHHHHH-HcCCCEEEECccccCCHHHHH
Confidence 985 1 33 3 3567898888 699999999998887885433
No 290
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=97.06 E-value=0.012 Score=53.67 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=87.4
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 86 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVG----------TTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEAVR 86 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHHHH
Confidence 477888888887655 999988763 234444445666677777776655 588887774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.+
T Consensus 87 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 152 (297)
T 2rfg_A 87 YAQHAQQAGADAVLCVAG----YYNRPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAA 152 (297)
T ss_dssp HHHHHHHHTCSEEEECCC----TTTCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHc
Confidence 999999999999988632 232332 24556788888899976 55 54468888888763
No 291
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=97.06 E-value=0.0011 Score=60.08 Aligned_cols=91 Identities=12% Similarity=0.188 Sum_probs=64.4
Q ss_pred HHHHHHHhhccc--CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-----CCc
Q 020428 132 HDILTMLKRNLD--VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-----SIP 204 (326)
Q Consensus 132 ~~iv~~v~~~~~--~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-----~iP 204 (326)
.+.++++++..+ .+|.|-+. +.+.++.+.++|+|.|.++.. ..+.++++.+.+ ++|
T Consensus 180 ~~av~~ar~~~~~~~~I~VEV~-------tleea~eA~~aGaD~I~LDn~----------~~e~l~~av~~l~~~~~~v~ 242 (285)
T 1o4u_A 180 ERAVQEVRKIIPFTTKIEVEVE-------NLEDALRAVEAGADIVMLDNL----------SPEEVKDISRRIKDINPNVI 242 (285)
T ss_dssp HHHHHHHHTTSCTTSCEEEEES-------SHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHHHHhCCCCceEEEEeC-------CHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhhccCCCce
Confidence 445666666552 45666442 245566677799999999874 234454444443 789
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+.++|||+ ++.+.++. .+|+|++.+|+....-|++
T Consensus 243 ieASGGIt-~eni~~~a-~tGVD~IsvGslt~sa~~~ 277 (285)
T 1o4u_A 243 VEVSGGIT-EENVSLYD-FETVDVISSSRLTLQEVFV 277 (285)
T ss_dssp EEEEECCC-TTTGGGGC-CTTCCEEEEGGGTSSCCCC
T ss_pred EEEECCCC-HHHHHHHH-HcCCCEEEEeHHHcCCCCc
Confidence 99999994 78888888 7999999999977765543
No 292
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=97.05 E-value=0.0071 Score=58.24 Aligned_cols=122 Identities=17% Similarity=0.225 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHh-hc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMV-CK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e 161 (326)
.+|+++++.|+.+ .+ ||..+-+..|-+ +++.-.+.++++|+++ ++++.+-..-+|+..++++
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~~~~~L~vDaN~~w~~~~Ai~ 254 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVF---------------PPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKW 254 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeeeCCCCCCHHHHHH
Confidence 5788888877765 44 999998876532 3455566788888876 6677787777899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++.+++. +.+|- +. ..+++..+++++.+++||.+.-.+.+..++.++++...+|.+++-
T Consensus 255 ~~~~L~~~-l~~iE-------eP---~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d 314 (445)
T 3va8_A 255 VAKELEGI-VEYLE-------DP---AGEIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSD 314 (445)
T ss_dssp HHHHTTTT-CSEEE-------SC---BSHHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEEC
T ss_pred HHHHHhhh-cCeEe-------ec---CcCHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEec
Confidence 99999988 77762 22 137888999999999999998899999999999975668888873
No 293
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=97.04 E-value=0.014 Score=54.04 Aligned_cols=123 Identities=16% Similarity=0.142 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~ 120 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGS----------TGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEAVA 120 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHH
Confidence 477888888887765 9999988642 34444445666677777777665 588888774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.+
T Consensus 121 la~~A~~~Gadavlv~~P----~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~ 186 (332)
T 2r8w_A 121 LAKDAEAAGADALLLAPV----SYTPLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAY 186 (332)
T ss_dssp HHHHHHHHTCSEEEECCC----CSSCCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHc
Confidence 999999999999987633 222222 24566788888999986 45 43458888888874
No 294
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=97.04 E-value=0.017 Score=54.18 Aligned_cols=121 Identities=11% Similarity=0.146 Sum_probs=91.5
Q ss_pred CHHHHHHHHHH-hhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~ 162 (326)
+++++.+.++. +.+||..+-+..|- +++.-.+.++++++++ ++.+.+...-+|+.++++++
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~----------------~~~~d~~~v~avr~a~g~~~~l~vDaN~~~~~~~a~~~ 207 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGR----------------EPEKDPERVRAAREAIGESVELMVDANGAYTRKQALYW 207 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCS----------------SGGGHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCC----------------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHH
Confidence 45656555554 44599999886541 4455567788888776 46777777778999999999
Q ss_pred HHHHHHc-CCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC--CcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 163 ARRIEKT-GVSALAVHGRKVADRPRDPAKWGEIADIVAALS--IPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 163 a~~l~~~-G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~--iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++.+++. ++.+| +| +..+.|++..+++++.++ +||.+.=.+.|..++.++ ...+|.+++=
T Consensus 208 ~~~l~~~~~i~~i-------Eq-P~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~ik 270 (372)
T 3cyj_A 208 AGAFAREAGISYL-------EE-PVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQAD 270 (372)
T ss_dssp HHHHHHHHCCCEE-------EC-SSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEEC
T ss_pred HHHHHhhcCCcEE-------EC-CCCcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEEecC
Confidence 9999999 88876 22 224458999999999887 799998899999998887 4678988873
No 295
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=97.03 E-value=0.014 Score=50.17 Aligned_cols=127 Identities=10% Similarity=0.036 Sum_probs=79.8
Q ss_pred cEEEE--EC--CCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEec
Q 020428 77 HVVFQ--MG--TSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIR 151 (326)
Q Consensus 77 p~~vQ--l~--g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r 151 (326)
++++- +. +++|+.+. +.+.+ |+|.|.+|.... + +.++.+++..+ +++...
T Consensus 53 ~v~~D~kl~DI~~t~~~~v---~~~~~~Gad~vtvh~~~g----------------~----~~i~~~~~~~g--v~vl~~ 107 (208)
T 2czd_A 53 EIIADLKLADIPNTNRLIA---RKVFGAGADYVIVHTFVG----------------R----DSVMAVKELGE--IIMVVE 107 (208)
T ss_dssp EEEEEEEECSCHHHHHHHH---HHHHHTTCSEEEEESTTC----------------H----HHHHHHHTTSE--EEEECC
T ss_pred EEEEEeeeCchHHHHHHHH---HHHHhcCCCEEEEeccCC----------------H----HHHHHHHHhCC--cEEEEe
Confidence 45544 34 45554444 33334 899999986321 1 12455554433 444433
Q ss_pred CCCC------hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeCCCCCH-HHHHHHHHh
Q 020428 152 LLKS------SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIANGDVFEY-DDFQRIKTA 223 (326)
Q Consensus 152 ~g~~------~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nGgI~s~-~d~~~~l~~ 223 (326)
+... .+....++....+.|++++.+.+. ..+.++++++..+ -+++..|||+.. .++.+++ .
T Consensus 108 t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~----------~~~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~-~ 176 (208)
T 2czd_A 108 MSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT----------RPERIGYIRDRLKEGIKILAPGIGAQGGKAKDAV-K 176 (208)
T ss_dssp CCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS----------STHHHHHHHHHSCTTCEEEECCCCSSTTHHHHHH-H
T ss_pred cCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhCCCCeEEEECCCCCCCCCHHHHH-H
Confidence 3211 234556778888999999866532 2355677777665 367899999863 3688888 5
Q ss_pred cCCcEEEeccchhcCc
Q 020428 224 AGASSVMAARGALWNA 239 (326)
Q Consensus 224 ~Gad~VmiGr~~l~~P 239 (326)
.|+|++.+||+++..+
T Consensus 177 aGad~vvvGr~I~~a~ 192 (208)
T 2czd_A 177 AGADYIIVGRAIYNAP 192 (208)
T ss_dssp HTCSEEEECHHHHTSS
T ss_pred cCCCEEEEChHHhcCC
Confidence 8999999999988653
No 296
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=97.01 E-value=0.0043 Score=56.21 Aligned_cols=89 Identities=13% Similarity=0.197 Sum_probs=62.7
Q ss_pred HHHHHHhhccc--CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEe
Q 020428 133 DILTMLKRNLD--VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIAN 208 (326)
Q Consensus 133 ~iv~~v~~~~~--~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~n 208 (326)
+-++.+++..+ .+|.+-+. +.+.++.+.++|+|+|.++..+ .+.++++.+.+ ++|+.+.
T Consensus 184 ~av~~ar~~~~~~~~IgVev~-------t~eea~eA~~aGaD~I~ld~~~----------~~~~k~av~~v~~~ipi~As 246 (286)
T 1x1o_A 184 EAVRRAKARAPHYLKVEVEVR-------SLEELEEALEAGADLILLDNFP----------LEALREAVRRVGGRVPLEAS 246 (286)
T ss_dssp HHHHHHHHHSCTTSCEEEEES-------SHHHHHHHHHHTCSEEEEESCC----------HHHHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHhCCCCCEEEEEeC-------CHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhCCCCeEEEE
Confidence 35666666552 45655442 2444566678899999998752 34455555544 6999999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
|||+ ++.+.++. .+|+|+|.+|+....-|+
T Consensus 247 GGIt-~eni~~~a-~tGvD~IsVgs~~~~a~~ 276 (286)
T 1x1o_A 247 GNMT-LERAKAAA-EAGVDYVSVGALTHSAKA 276 (286)
T ss_dssp SSCC-HHHHHHHH-HHTCSEEECTHHHHSCCC
T ss_pred cCCC-HHHHHHHH-HcCCCEEEEcHHHcCCCc
Confidence 9995 89999998 699999999986665454
No 297
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=97.00 E-value=0.016 Score=52.63 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=86.2
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 93 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGT----------TGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEAIA 93 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHH
Confidence 477888888887665 9999988642 33333445666677777776655 588888663 257889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..- .|..+. -+++++.|.+++++||+ +| |---+++.+.++.
T Consensus 94 la~~a~~~Gadavlv~~P----~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 158 (297)
T 3flu_A 94 LSQAAEKAGADYTLSVVP----YYNKPSQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLA 158 (297)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHH
Confidence 999999999999987642 222222 24567788888899986 54 5455777777765
No 298
>4h2h_A Mandelate racemase/muconate lactonizing enzyme; enolase, mandelate racemase subgroup, enzyme function initia EFI, structural genomics; HET: 0XW; 1.70A {Pelagibaca bermudensis} PDB: 2pmq_A*
Probab=96.99 E-value=0.013 Score=55.00 Aligned_cols=129 Identities=7% Similarity=0.090 Sum_probs=94.5
Q ss_pred cEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRL 152 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~ 152 (326)
|+-..++..+++++.+.++... +||..+-+..|.. +++.-.+.++++++++ ++.+.+-..-
T Consensus 141 ~~y~s~~~~~~~~~~~~a~~~~~~G~~~~KiKvg~~---------------~~~~di~~v~~vr~a~~g~~~~l~vDaN~ 205 (376)
T 4h2h_A 141 SSYYSLGVMEPDEAARQALEKQREGYSRLQVKLGAR---------------PIEIDIEAIRKVWEAVRGTGIALAADGNR 205 (376)
T ss_dssp ECEEEECSCCHHHHHHHHHHHHHHTCSEEEEECCSS---------------CHHHHHHHHHHHHHHHTTSCCEEEEECTT
T ss_pred eEeeecccCCHHHHHHHHHHHHhcCceEEEEecCCC---------------CHHHHHHHHHHHHhhccCCeeEEEEeecc
Confidence 5556677788888777666554 4999999876632 2233345566666654 4667777777
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+|+..+++++++.+++.+. ++ +|. -.+++.++.+++.+++||.+.=.+.+..++.++++...+|.+++
T Consensus 206 ~~~~~~A~~~~~~l~~~~~-~i-------EeP---~~~~~~~~~l~~~~~~pia~dE~~~~~~~~~~~~~~~~~d~v~~ 273 (376)
T 4h2h_A 206 GWTTRDALRFSRECPDIPF-VM-------EQP---CNSFEDLEAIRPLCHHALYMDEDGTSLNTVITAAATSLVDGFGM 273 (376)
T ss_dssp CCCHHHHHHHHHHCTTSCE-EE-------ESC---SSSHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEECC
T ss_pred CCCHHHHHHHHHHHhhccc-cc-------cCC---cchhhhHhhhhhcccCccccCcccCCHHHHHHHHHhhccCcccc
Confidence 8999999999999987764 32 221 12578889999999999999889999999999996555788765
No 299
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=96.99 E-value=0.015 Score=54.00 Aligned_cols=122 Identities=15% Similarity=0.137 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~ 117 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGS----------GGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARETIE 117 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHH
Confidence 467788888887665 8999888642 33444445666677777777665 588887764 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.
T Consensus 118 la~~A~~~Gadavlv~~P----~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINP----YYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHTCSEEEEECC----SSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 999999999999987632 222222 24556788888899976 45 4345788888776
No 300
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=96.98 E-value=0.0076 Score=55.32 Aligned_cols=120 Identities=16% Similarity=0.140 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+.. +..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~ 97 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNG----------NTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIE 97 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECc----------ccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHH
Confidence 477888888887665 899987653 234444445666677777777655 5899998864 7889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee--CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN--GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n--GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+++++||+ +| |- -+++.+.++.
T Consensus 98 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~tg~-l~~~~~~~La 158 (314)
T 3d0c_A 98 LGKSAIDSGADCVMIHQP----VHPYITDAGAVEYYRNIIEALDAPSIIYFKDAH-LSDDVIKELA 158 (314)
T ss_dssp HHHHHHHTTCSEEEECCC----CCSCCCHHHHHHHHHHHHHHSSSCEEEEECCTT-SCTHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCC-cCHHHHHHHH
Confidence 999999999999988643 222232 24566788888999986 45 43 6778777765
No 301
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=96.98 E-value=0.0097 Score=57.25 Aligned_cols=122 Identities=13% Similarity=0.225 Sum_probs=96.1
Q ss_pred CCHHHHHHHHHHh-hc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMV-CK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e 161 (326)
.+|+++++.|+.+ .+ ||..+-+..|.. +++.-.+.++++|+++ ++++.+-..-+|+..++++
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai~ 251 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVF---------------PPEQEAEAIQALRDAFPGLPLRLDPNAAWTVETSIR 251 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCC---------------CHHHHHHHHHHHHHhCCCCcEeccCCCCCCHHHHHH
Confidence 5789888877765 44 999998876532 3445556788888877 6678888777899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++.+++. +.+| +|.. .+++..+++++.+++||.+.=.+.+..++.++++...+|.+++-
T Consensus 252 ~~~~L~~~-l~~i-------EeP~---~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d 311 (441)
T 3vc5_A 252 VGRALDGV-LEYL-------EDPT---PGIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLID 311 (441)
T ss_dssp HHHHTTTT-CSEE-------ECCS---SSHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHH-HHHh-------hccC---CCHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeec
Confidence 99999988 7776 2221 37889999999999999988889999999999976668888773
No 302
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=96.96 E-value=0.026 Score=51.20 Aligned_cols=122 Identities=9% Similarity=0.074 Sum_probs=88.7
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 89 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGT----------TGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDAAD 89 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHHHH
Confidence 477788888887665 9999988642 34444446677778888887776 578888775 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCC-cC---CHHHHHHHHHhc---CCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRD-PA---KWGEIADIVAAL---SIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~-~~---~~~~i~~i~~~~---~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.+++.|+|++.+..- .|.. +. -+++++.|.+++ ++||+ +| |---+++.+.++.
T Consensus 90 la~~A~~~Gadavlv~~P----~y~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 90 QSAEALNAGARNILLAPP----SYFKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp HHHHHHHTTCSEEEECCC----CSSCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEEcCC----cCCCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 999999999999988633 2222 22 245667888888 89986 55 4446788888887
No 303
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=96.95 E-value=0.02 Score=52.53 Aligned_cols=123 Identities=20% Similarity=0.226 Sum_probs=87.2
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ai~ 108 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGT----------TGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSEAVE 108 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----------ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHH
Confidence 467888888887665 9999977632 33333345666677777776655 588888664 257889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.+
T Consensus 109 la~~A~~~Gadavlv~~P----~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 109 LAKHAEKAGADAVLVVTP----YYNRPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 999999999999987643 222222 24566788888899986 54 55567888888875
No 304
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=96.94 E-value=0.02 Score=52.59 Aligned_cols=121 Identities=17% Similarity=0.143 Sum_probs=86.3
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~G----------tTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ai~ 110 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLG----------STGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAKTVR 110 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHH
Confidence 467788888887765 999998764 234444445666677777776655 588888664 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRI 220 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~ 220 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |--.+++.+.++
T Consensus 111 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 174 (315)
T 3na8_A 111 RAQFAESLGAEAVMVLPI----SYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRI 174 (315)
T ss_dssp HHHHHHHTTCSEEEECCC----CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHH
Confidence 999999999999988543 222222 24566788888899986 55 555578888887
No 305
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=96.93 E-value=0.024 Score=51.61 Aligned_cols=124 Identities=15% Similarity=0.152 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEEEecCCCChHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~vK~r~g~~~~~~~ 160 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ai 93 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGT----------TGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHEAV 93 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHHHH
Confidence 477888888887765 9999987642 33343445666677777776665 368888653 25788999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHHh
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKTA 223 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~~ 223 (326)
++++.+++.|+|++.+..- .|..+. -++.++.|.+++++||+ +| |---+++.+.++.+.
T Consensus 94 ~la~~a~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAP----YYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp HHHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 9999999999999988643 222222 24567788888999986 54 555678888888754
No 306
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=96.93 E-value=0.022 Score=51.64 Aligned_cols=123 Identities=13% Similarity=0.138 Sum_probs=85.9
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 88 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNG----------TTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKSIQ 88 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHH
Confidence 367778888877655 999998764 233443445566667777776655 588888664 256889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..= .|..+. -+++++.|.+++++||+ +| |---+++.+.++.+
T Consensus 89 la~~a~~~Gadavlv~~P----~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 89 ASIQAKALGADAIMLITP----YYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 999999999999987632 122222 24566788888899986 54 55567888877764
No 307
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=96.93 E-value=0.02 Score=51.92 Aligned_cols=122 Identities=17% Similarity=0.189 Sum_probs=85.5
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 87 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGT----------TGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREAIE 87 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHH
Confidence 477888888887665 9999977642 23333334566677777776655 578888654 256889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.+++.|+|++.+..- .|..+. -+++++.|.+.+++||+ +| |---+++.+.++.
T Consensus 88 la~~a~~~Gadavlv~~P----~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3tak_A 88 LTKAAKDLGADAALLVTP----YYNKPTQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLA 152 (291)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHH
Confidence 999999999999987643 122222 25567788888999986 54 5556788777775
No 308
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=96.91 E-value=0.012 Score=50.57 Aligned_cols=180 Identities=11% Similarity=0.073 Sum_probs=104.1
Q ss_pred cCCCCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEECCC-CHHHHH
Q 020428 13 VRVGTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQMGTS-DAVRAL 91 (326)
Q Consensus 13 ~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl~g~-~~~~~~ 91 (326)
+|.|+..=...+.+.|++.+.--+. +.+ .|.. ..+.-..+....+.. ...|-+|.+ +++...
T Consensus 7 CGit~~eda~~a~~~GaD~iGfif~-~~S----pR~V----------~~~~a~~i~~~~~~~--~~~VgVfvn~~~~~i~ 69 (205)
T 1nsj_A 7 CGITNLEDALFSVESGADAVGFVFY-PKS----KRYI----------SPEDARRISVELPPF--VFRVGVFVNEEPEKIL 69 (205)
T ss_dssp CCCCSHHHHHHHHHHTCSEEEEECC-TTC----TTBC----------CHHHHHHHHHHSCSS--SEEEEEESSCCHHHHH
T ss_pred CCCCcHHHHHHHHHcCCCEEEEEec-CCC----CCcC----------CHHHHHHHHHhCCCC--CCEEEEEeCCCHHHHH
Confidence 6888888888899999876642221 111 0100 000001112222221 234444554 566666
Q ss_pred HHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCC
Q 020428 92 TAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGV 171 (326)
Q Consensus 92 ~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~ 171 (326)
+.++.+ +.|.|.||.. ..|+.+. .++. ++|+.--++... ..+ + ..+.+..+
T Consensus 70 ~~~~~~--~ld~vQLHG~----------------e~~~~~~----~l~~--~~~vika~~v~~-~~~---l-~~~~~~~~ 120 (205)
T 1nsj_A 70 DVASYV--QLNAVQLHGE----------------EPIELCR----KIAE--RILVIKAVGVSN-ERD---M-ERALNYRE 120 (205)
T ss_dssp HHHHHH--TCSEEEECSC----------------CCHHHHH----HHHT--TSEEEEEEEESS-HHH---H-HHHGGGTT
T ss_pred HHHHhh--CCCEEEECCC----------------CCHHHHH----HHhc--CCCEEEEEEcCC-HHH---H-HHHHHcCC
Confidence 655543 7899999831 2344443 3332 366665555432 222 1 22334449
Q ss_pred cEEEEeecccC-CCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 172 SALAVHGRKVA-DRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 172 d~i~vh~r~~~-~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
|++.+...... ++.....||+.++.++ ..+.|++..||+ +++.+.++++..++.||-+.+|.=..|.
T Consensus 121 d~~LlD~~~~~~GGtG~~fdw~~l~~~~-~~~~p~~LAGGL-~peNV~~ai~~~~p~gVDvsSGvE~~pG 188 (205)
T 1nsj_A 121 FPILLDTKTPEYGGSGKTFDWSLILPYR-DRFRYLVLSGGL-NPENVRSAIDVVRPFAVDVSSGVEAFPG 188 (205)
T ss_dssp SCEEEEESCSSSSSCCSCCCGGGTGGGG-GGSSCEEEESSC-CTTTHHHHHHHHCCSEEEESGGGEEETT
T ss_pred CEEEECCCCCCCCCCCCccCHHHHHhhh-cCCCcEEEECCC-CHHHHHHHHHhcCCCEEEECCceecCCC
Confidence 99999865431 2333467998876542 347899999999 4778877776679999999999765554
No 309
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=96.91 E-value=0.021 Score=52.29 Aligned_cols=127 Identities=13% Similarity=0.146 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 94 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILA----------NFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQVCAA 94 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHHHHH
Confidence 477888888887765 999988863 234444445666677777777665 588988874 256889999
Q ss_pred HHHHHHHcCCcEEEEeecccC--CCCCCcCCHHHHHHHHHhcCCcEE-Ee----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVA--DRPRDPAKWGEIADIVAALSIPVI-AN----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~--~~~~~~~~~~~i~~i~~~~~iPVi-~n----GgI~s~~d~~~~l~ 222 (326)
+++.++++|+|++.+..-.-. ...+...-++.++.|.+++++||+ +| |--.+++.+.++.+
T Consensus 95 la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~ 162 (309)
T 3fkr_A 95 RSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAR 162 (309)
T ss_dssp HHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHh
Confidence 999999999999988542110 011111225567788888899976 44 54467888888764
No 310
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=96.91 E-value=0.021 Score=52.09 Aligned_cols=122 Identities=16% Similarity=0.152 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ai~ 98 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLG----------TTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKTLK 98 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHHHH
Confidence 477888888887665 999998864 234444445666677777776655 588887774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.
T Consensus 99 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 99 LVKQAEKLGANGVLVVTP----YYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 999999999999987643 222222 24556788888899976 45 4345788888876
No 311
>2opj_A O-succinylbenzoate-COA synthase; TIM barrel, structural genomics, protein structure initiative; 1.60A {Thermobifida fusca} PDB: 2qvh_A*
Probab=96.90 E-value=0.0045 Score=57.17 Aligned_cols=131 Identities=14% Similarity=0.157 Sum_probs=83.6
Q ss_pred cEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLK 154 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~ 154 (326)
|+-.-+...+++++.+.++ ..||..+-+..|.+ |.. ++.-.+.++++|+.+ ++.+.+-..-+|
T Consensus 71 ~~~~ti~~~~~e~~~~~~~--~~G~~~~KiKvg~~---------g~~----~~~d~~~v~avR~~~G~~~~L~vDaN~~w 135 (327)
T 2opj_A 71 PVNATVPAVGPEEAARIVA--SSGCTTAKVKVAER---------GQS----EANDVARVEAVRDALGPRGRVRIDVNGAW 135 (327)
T ss_dssp EBCEEECSCCHHHHHHHHH--HHCCSEEEEECCC-------------------CHHHHHHHHHHHHCTTSEEEEECTTCS
T ss_pred EEeEEeCCCCHHHHHHHHH--HCCCCEEEEEeCCC---------CCC----HHHHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence 3333455567887655544 46999999877643 111 222346678888776 466777777789
Q ss_pred ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 155 SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 155 ~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.++++++++.+++.++.+| +|.. .+++..+++++.+++||.+.=.+.+..|+.++++...+|.|++=
T Consensus 136 ~~~~A~~~~~~L~~~~l~~i-------EqP~---~~~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~i~ik 203 (327)
T 2opj_A 136 DVDTAVRMIRLLDRFELEYV-------EQPC---ATVDELAEVRRRVSVPIAADESIRRAEDPLRVRDAEAADVVVLK 203 (327)
T ss_dssp CHHHHHHHHHHHGGGCEEEE-------ECCS---SSHHHHHHHHHHCSSCEEC-----------CTTTTTCCSBEEEC
T ss_pred CHHHHHHHHHHHHhcCCcEE-------eCCC---CCHHHHHHHHhhCCCCEEcCCCCCCHHHHHHHHHhCCCCEEEeC
Confidence 99999999999999887765 2221 25788899999999999999899999999998865558888874
No 312
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=96.90 E-value=0.0012 Score=65.23 Aligned_cols=79 Identities=14% Similarity=0.175 Sum_probs=57.8
Q ss_pred HHHHHHHHHcC---CcEEEEeecccC---CCCC-CcCCHHHHHHHHHh------cCCcEEEeCCCCCHHHHHHHHHh---
Q 020428 160 VELARRIEKTG---VSALAVHGRKVA---DRPR-DPAKWGEIADIVAA------LSIPVIANGDVFEYDDFQRIKTA--- 223 (326)
Q Consensus 160 ~e~a~~l~~~G---~d~i~vh~r~~~---~~~~-~~~~~~~i~~i~~~------~~iPVi~nGgI~s~~d~~~~l~~--- 223 (326)
.+.+..+.+.| +|+|.+..--.. ..+. .+..++.++++++. .++||++-||| +++++.++++.
T Consensus 118 ~eea~~A~~~G~~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvvAIGGI-~~~ni~~v~~~~~~ 196 (540)
T 3nl6_A 118 PEEVDELSKMGPDMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTVGIGGL-HPDNIERVLYQCVS 196 (540)
T ss_dssp HHHHHHHHHTCC--CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEEEESSC-CTTTHHHHHHHCBC
T ss_pred HHHHHHHHHcCCCCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEEEEcCC-CHHHHHHHHHhhcc
Confidence 34566778889 999998543221 1222 34457888888775 48999999999 78999999942
Q ss_pred ----cCCcEEEeccchhcCc
Q 020428 224 ----AGASSVMAARGALWNA 239 (326)
Q Consensus 224 ----~Gad~VmiGr~~l~~P 239 (326)
.|+|+|.++++++..+
T Consensus 197 ~g~~~GadgvAVvsaI~~a~ 216 (540)
T 3nl6_A 197 SNGKRSLDGICVVSDIIASL 216 (540)
T ss_dssp TTSSCBCSCEEESHHHHTCT
T ss_pred cccccCceEEEEeHHHhcCC
Confidence 7899999999988644
No 313
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=96.88 E-value=0.028 Score=51.38 Aligned_cols=127 Identities=13% Similarity=0.116 Sum_probs=87.3
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 100 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQG----------SNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQATVE 100 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHHHHH
Confidence 467788888887766 999998864 234444456677788888888776 578887653 257889999
Q ss_pred HHHHHHHcCCcEEEEeecc-cCCCCCCcCCHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRK-VADRPRDPAKWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~-~~~~~~~~~~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..=. .....+...-+++++.|.+.+++||+ +| |---+++.+.++.+
T Consensus 101 la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 168 (307)
T 3s5o_A 101 MTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQ 168 (307)
T ss_dssp HHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhc
Confidence 9999999999999875321 10001111235567788888899986 54 33457788777763
No 314
>3ijl_A Muconate cycloisomerase; enolase superfamily, dipeptide epimerase, L-Pro-D-Glu, nonpr binding; HET: DGL; 1.50A {Bacteroides thetaiotaomicron} PDB: 3iji_A* 3ijq_A*
Probab=96.86 E-value=0.0087 Score=55.45 Aligned_cols=123 Identities=12% Similarity=0.237 Sum_probs=93.2
Q ss_pred EECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC-ChHHH
Q 020428 81 QMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK-SSQDT 159 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~-~~~~~ 159 (326)
.++..+++++.+.++...+||..+-+..|.. .-.+.++++|++++..+.+-..-+| +.+++
T Consensus 129 ~~~~~~~e~~~~~a~~~~~g~~~~K~Kvg~~------------------~d~~~v~avR~~~~~~l~vDaN~~~t~~~~A 190 (338)
T 3ijl_A 129 TIGIDTPDVVRAKTKECAGLFNILKVKLGRD------------------NDKEMIETIRSVTDLPIAVDANQGWKDRQYA 190 (338)
T ss_dssp BCCCCCHHHHHHHHHHHHTTCSSEEEECSSS------------------CHHHHHHHHHTTCCCCEEEECTTCCCCHHHH
T ss_pred EEeCCCHHHHHHHHHHHHhcccEEEEecCcH------------------HHHHHHHHHHhhcCCcEEEECcCCCCCHHHH
Confidence 3445689988888877655888888876531 1245688888888777777777789 59999
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
.++++.+++.++.+| +| +..+-|++..+++++.+++||.+.=.+.|..++.+++ ..+|.+++
T Consensus 191 ~~~~~~l~~~~i~~i-------Ee-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~--~a~d~i~~ 252 (338)
T 3ijl_A 191 LDMIHWLKEKGIVMI-------EQ-PMPKEQLDDIAWVTQQSPLPVFADESLQRLGDVAALK--GAFTGINI 252 (338)
T ss_dssp HHHHHHHHHTTEEEE-------EC-CSCTTCHHHHHHHHHTCSSCEEESTTCCSGGGTGGGB--TTBSEEEE
T ss_pred HHHHHHHhhCCCCEE-------EC-CCCCCcHHHHHHHHhcCCCCEEECCCCCCHHHHHHHH--hhCCEEEe
Confidence 999999999987765 22 2345579999999999999999988999999887765 35676653
No 315
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=96.86 E-value=0.014 Score=50.03 Aligned_cols=193 Identities=14% Similarity=0.071 Sum_probs=111.8
Q ss_pred ccCCCCHHHHHHHHHcCCCeEEeCceecccccccccccccccCcccccccCCcceeeecccCCCCcEEEEECCC-CHHHH
Q 020428 12 MVRVGTLPFRLLAAQYGADITYGEEIIDHKLLKCERRVNEYIGSTDFVEKGTDSVVFRTCHQERNHVVFQMGTS-DAVRA 90 (326)
Q Consensus 12 M~g~t~~~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~vQl~g~-~~~~~ 90 (326)
.+|.|+..=...+.++|++.+.--+. +.+ .|.. ....-..+....+.. +..|-+|.+ +++..
T Consensus 5 ICGit~~eda~~a~~~GaD~iGfif~-~~S----pR~V----------~~~~a~~i~~~~~~~--~~~VgVfvn~~~~~i 67 (203)
T 1v5x_A 5 ICGITRLEDALLAEALGAFALGFVLA-PGS----RRRI----------APEAARAIGEALGPF--VVRVGVFRDQPPEEV 67 (203)
T ss_dssp ECCCCCHHHHHHHHHHTCSEEEEECC-TTC----TTBC----------CHHHHHHHHHHSCSS--SEEEEEESSCCHHHH
T ss_pred EcCCCcHHHHHHHHHcCCCEEEEEec-CCC----CCcC----------CHHHHHHHHHhCCCC--CCEEEEEeCCCHHHH
Confidence 36888888888899999876642221 111 0100 000001112222222 234444554 56666
Q ss_pred HHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcC
Q 020428 91 LTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTG 170 (326)
Q Consensus 91 ~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G 170 (326)
.+.++.+ +.|.|.||.. ..|+.+.++ +. ++|+.--++..... + + .+.+..
T Consensus 68 ~~~~~~~--~ld~vQLHG~----------------e~~~~~~~l----~~--~~~vika~~v~~~~-~---l--~~~~~~ 117 (203)
T 1v5x_A 68 LRLMEEA--RLQVAQLHGE----------------EPPEWAEAV----GR--FYPVIKAFPLEGPA-R---P--EWADYP 117 (203)
T ss_dssp HHHHHHT--TCSEEEECSC----------------CCHHHHHHH----TT--TSCEEEEEECSSSC-C---G--GGGGSS
T ss_pred HHHHHhh--CCCEEEECCC----------------CCHHHHHHh----cc--CCCEEEEEEcCChH-h---h--hhhhcC
Confidence 6655543 7899999831 245554443 22 57777666653221 1 1 123344
Q ss_pred CcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcccccccCCCCH
Q 020428 171 VSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASIFSSQGKLHW 250 (326)
Q Consensus 171 ~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~~~~~~~~ 250 (326)
+|++.+.... ++.....||+.++.+. ..+.|++..||++ ++.+.+++ ..++.||-+.+|.=..|.. ...
T Consensus 118 ~d~~LlD~~~--gGtG~~fdW~~l~~~~-~~~~p~~LAGGL~-peNV~~ai-~~~p~gVDvsSGvE~~pG~------KD~ 186 (203)
T 1v5x_A 118 AQALLLDGKR--PGSGEAYPRAWAKPLL-ATGRRVILAGGIA-PENLEEVL-ALRPYALDLASGVEEAPGV------KSA 186 (203)
T ss_dssp CSEEEEECSS--TTSCCCCCGGGGHHHH-HTTSCEEECSSCC-STTHHHHH-HHCCSEEEESGGGEEETTE------ECH
T ss_pred CCEEEEcCCC--CCCCCccCHHHHHhhh-ccCCcEEEECCCC-HHHHHHHH-hcCCCEEEeCCceecCCCC------cCH
Confidence 8999988643 3334567999887732 2468999999995 77787777 6899999999997655543 222
Q ss_pred HHHHHHHHHHHHh
Q 020428 251 EDVKREYVRKSIF 263 (326)
Q Consensus 251 ~~~~~~~~~~~~~ 263 (326)
+.+++|++....
T Consensus 187 -~ki~~fi~~~r~ 198 (203)
T 1v5x_A 187 -EKLRALFARLAS 198 (203)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHH
Confidence 334566665544
No 316
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=96.85 E-value=0.014 Score=54.75 Aligned_cols=96 Identities=17% Similarity=0.253 Sum_probs=69.8
Q ss_pred HHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC------------------------C--------
Q 020428 136 TMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA------------------------D-------- 183 (326)
Q Consensus 136 ~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~------------------------~-------- 183 (326)
+++......|.++.+-.+.+.+...++++.++++|++.|.|+--+.. +
T Consensus 115 eev~~~~~~~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~ 194 (370)
T 1gox_A 115 EEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDK 194 (370)
T ss_dssp HHHHTTCCCCEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC----
T ss_pred HHHHhhcCCCceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhcccc
Confidence 34444334577777655566777788999999999999887633210 0
Q ss_pred ------------CCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 184 ------------RPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 184 ------------~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
......+|+.++++++.+++||+. +++.+++++..+. +.|+|+|.++-
T Consensus 195 ~~g~~~~~~v~~~~~~~~~~~~i~~l~~~~~~pv~v-K~~~~~e~a~~a~-~~Gad~I~vs~ 254 (370)
T 1gox_A 195 ANDSGLSSYVAGQIDRSLSWKDVAWLQTITSLPILV-KGVITAEDARLAV-QHGAAGIIVSN 254 (370)
T ss_dssp -----HHHHHHHTBCTTCCHHHHHHHHHHCCSCEEE-ECCCSHHHHHHHH-HTTCSEEEECC
T ss_pred ccCccHHHHHHhhcCccchHHHHHHHHHHhCCCEEE-EecCCHHHHHHHH-HcCCCEEEECC
Confidence 001234688899999999999995 6789999999998 69999999953
No 317
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=96.85 E-value=0.023 Score=51.32 Aligned_cols=110 Identities=19% Similarity=0.247 Sum_probs=74.3
Q ss_pred ccCChHHHHHHHHHHhhcccCcEEEEecC-CC-C------h-----HHHHHHHHHHHHcCCcEEEEeecccCCCCCC--c
Q 020428 124 LLSKPELIHDILTMLKRNLDVPVTCKIRL-LK-S------S-----QDTVELARRIEKTGVSALAVHGRKVADRPRD--P 188 (326)
Q Consensus 124 l~~~p~~~~~iv~~v~~~~~~pv~vK~r~-g~-~------~-----~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~--~ 188 (326)
+..|-+..+++++..... ++.|-.-+.. |. + . .++.+..+.+++.|+|.|.+.=.|..+.|.+ .
T Consensus 110 ~eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~ 188 (286)
T 1gvf_A 110 FAENVKLVKSVVDFCHSQ-DCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYSKTPK 188 (286)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSCCSSCCSSCCC
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCccccCcCCCCc
Confidence 334555666666666543 5555554443 11 1 0 2356666777789999998765555555543 4
Q ss_pred CCHHHHHHHHHhcCCcEEEeCCCCC-HHHHHHHHHhcCCcEEEeccch
Q 020428 189 AKWGEIADIVAALSIPVIANGDVFE-YDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 189 ~~~~~i~~i~~~~~iPVi~nGgI~s-~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
.+++.+++|++.+++|++.-||=.+ .+++++++ ..|+.-|=|++.+
T Consensus 189 Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai-~~Gv~KiNi~Tdl 235 (286)
T 1gvf_A 189 IDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTI-ELGVTKVNVATEL 235 (286)
T ss_dssp CCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHH-HTTEEEEEECHHH
T ss_pred cCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHH-HCCCeEEEEChHH
Confidence 6899999999999999998886544 56688888 6898888888764
No 318
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=96.85 E-value=0.0074 Score=52.27 Aligned_cols=79 Identities=27% Similarity=0.368 Sum_probs=67.7
Q ss_pred CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHh
Q 020428 144 VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTA 223 (326)
Q Consensus 144 ~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~ 223 (326)
.|+..=+|. .+.++...+++.+.+.|++.|-|+-|+ +.-.+.|+++++.++-++|+.|-|.|.++++.++ .
T Consensus 13 ~~vi~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai-~ 83 (217)
T 3lab_A 13 KPLIPVIVI-DDLVHAIPMAKALVAGGVHLLEVTLRT-------EAGLAAISAIKKAVPEAIVGAGTVCTADDFQKAI-D 83 (217)
T ss_dssp CSEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTSEEEEECCCSHHHHHHHH-H
T ss_pred CCEEEEEEc-CCHHHHHHHHHHHHHcCCCEEEEeCCC-------ccHHHHHHHHHHHCCCCeEeeccccCHHHHHHHH-H
Confidence 466666664 677899999999999999999998775 3357899999998877899999999999999999 6
Q ss_pred cCCcEEEe
Q 020428 224 AGASSVMA 231 (326)
Q Consensus 224 ~Gad~Vmi 231 (326)
.||+.++.
T Consensus 84 AGA~fivs 91 (217)
T 3lab_A 84 AGAQFIVS 91 (217)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEe
Confidence 99999875
No 319
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=96.84 E-value=0.00093 Score=60.88 Aligned_cols=91 Identities=10% Similarity=0.084 Sum_probs=49.8
Q ss_pred HHHHHHHhhccc--CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--------
Q 020428 132 HDILTMLKRNLD--VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-------- 201 (326)
Q Consensus 132 ~~iv~~v~~~~~--~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-------- 201 (326)
.+-++++++..+ .++.+-+. +. +.++.+.++|+|+|-++..+ .+.++++++.+
T Consensus 186 ~~ai~~~r~~~~~~~~i~vev~---tl----ee~~~A~~aGaD~I~ld~~~----------~~~l~~~v~~l~~~~~g~~ 248 (294)
T 3c2e_A 186 TNAVKNARAVCGFAVKIEVECL---SE----DEATEAIEAGADVIMLDNFK----------GDGLKMCAQSLKNKWNGKK 248 (294)
T ss_dssp HHHHHHHHHHHCTTSCEEEECS---SS----HHHHHHHHHTCSEEECCC-------------------------------
T ss_pred HHHHHHHHHhcCcCCeEEEecC---CH----HHHHHHHHcCCCEEEECCCC----------HHHHHHHHHHhcccccCCC
Confidence 445566665553 45555442 12 23444456899999886531 23334433333
Q ss_pred CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 202 SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 202 ~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
++||.++||| |.+.+.++. .+|+|++.+|+.....|++
T Consensus 249 ~v~I~ASGGI-t~~ni~~~~-~~GvD~i~vGs~i~~a~~~ 286 (294)
T 3c2e_A 249 HFLLECSGGL-NLDNLEEYL-CDDIDIYSTSSIHQGTPVI 286 (294)
T ss_dssp CCEEEEECCC-CC------C-CCSCSEEECGGGTSSCCCC
T ss_pred CeEEEEECCC-CHHHHHHHH-HcCCCEEEEechhcCCCCC
Confidence 2899999999 899999999 6999999999986655553
No 320
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=96.83 E-value=0.025 Score=51.60 Aligned_cols=122 Identities=16% Similarity=0.254 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ai~ 102 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGT----------TGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTSVE 102 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHHHH
Confidence 467788888887665 9999888642 33343345666677777776655 478887764 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.+++.|+|++.+..= .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.
T Consensus 103 la~~A~~~Gadavlv~~P----~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 103 LAEAAASAGADGLLVVTP----YYSKPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 999999999999987632 232232 24556788888899976 55 4335778777765
No 321
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=96.82 E-value=0.025 Score=51.59 Aligned_cols=123 Identities=12% Similarity=0.205 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~ 97 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGS----------TGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAESQQ 97 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECee----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHH
Confidence 467788888887665 9999988642 33444445666677777776655 578888764 246789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcC-CcEE-Ee----CCC-CCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALS-IPVI-AN----GDV-FEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~-iPVi-~n----GgI-~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..- .|..+. -++.++.|.+.++ +||+ +| .|+ -+++.+.++.+
T Consensus 98 la~~A~~~Gadavlv~~P----~y~~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~ 164 (303)
T 2wkj_A 98 LAASAKRYGFDAVSAVTP----FYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVT 164 (303)
T ss_dssp HHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEecCC----CCCCCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhc
Confidence 999999999999987633 232232 2455678888888 9986 55 243 57888888764
No 322
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=96.82 E-value=0.047 Score=49.48 Aligned_cols=123 Identities=12% Similarity=0.116 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHh-h-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHH
Q 020428 85 SDAVRALTAAKMV-C-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~ 160 (326)
-|.+.+.+.++.+ . .|+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..+++
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai 89 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGG----------STGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKEAV 89 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCc----------cccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHH
Confidence 4677787777765 4 4899998863 234444445666677777777655 578887764 25678999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
++++.++++|+|++.+..- .|..+. -++.++.|.+.+++||+ +| |---+++.+.++.+
T Consensus 90 ~la~~a~~~Gadavlv~~P----~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 156 (293)
T 1f6k_A 90 ELGKYATELGYDCLSAVTP----FYYKFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYK 156 (293)
T ss_dssp HHHHHHHHHTCSEEEEECC----CSSCCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhc
Confidence 9999999999999987633 222232 24566788888899986 55 43357888888763
No 323
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=96.81 E-value=0.055 Score=47.24 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC--C---ChHHH
Q 020428 86 DAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL--K---SSQDT 159 (326)
Q Consensus 86 ~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g--~---~~~~~ 159 (326)
++..+.+.|+.+.+ |+.+|..+ . .+.++++++.+++||.-..+.. . -...+
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~~-------------------~----~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~ 90 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRIE-------------------G----IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPY 90 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEE-------------------S----HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCS
T ss_pred CcchHHHHHHHHHHCCCcEEEEC-------------------C----HHHHHHHHHhcCCCEEEEEeecCCCCceEeCcc
Confidence 47888888888877 89998863 1 2457889999999987544431 1 11123
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCC-HHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAK-WGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~-~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
.+.+..+.++|+|.|.+...... .|.. .++++.+++ .++++++ ++.|.+++.++. +.|+|.|.+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~----~p~~l~~~i~~~~~-~g~~v~~--~v~t~eea~~a~-~~Gad~Ig~ 155 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRS----RPVDIDSLLTRIRL-HGLLAMA--DCSTVNEGISCH-QKGIEFIGT 155 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSC----CSSCHHHHHHHHHH-TTCEEEE--ECSSHHHHHHHH-HTTCSEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccC----ChHHHHHHHHHHHH-CCCEEEE--ecCCHHHHHHHH-hCCCCEEEe
Confidence 44567788899999987654211 1222 355666655 4777765 689999999998 699999965
No 324
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=96.81 E-value=0.012 Score=53.37 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=83.2
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ai~ 87 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCG----------TTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAASIA 87 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHH
Confidence 577788888887655 999998864 234444445666677777776655 588887774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCC---HHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAK---WGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~---~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.+++.|+|++.+..- .|..+.+ ++.++.|.+.+++||+ +| |---+++.+.++.
T Consensus 88 la~~a~~~Gadavlv~~P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 152 (291)
T 3a5f_A 88 MSKWAESIGVDGLLVITP----YYNKTTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELC 152 (291)
T ss_dssp HHHHHHHTTCSEEEEECC----CSSCCCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHT
T ss_pred HHHHHHhcCCCEEEEcCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHH
Confidence 999999999999987632 2323322 3334566677788875 45 4445777777765
No 325
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=96.78 E-value=0.0024 Score=59.75 Aligned_cols=70 Identities=17% Similarity=0.240 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
....+.++.+.++|+|.|+++.-.. + ...-|+.++.+++.. ++||++ |+|.|+++++.+. +.|||+|.+|
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G---~-~~~~~e~I~~ir~~~~~~~Vi~-G~V~T~e~A~~a~-~aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHA---H-AKYVGKTLKSLRQLLGSRCIMA-GNVATYAGADYLA-SCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCC---S-SHHHHHHHHHHHHHHTTCEEEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCC---C-cHhHHHHHHHHHHhcCCCeEEE-cCcCCHHHHHHHH-HcCCCEEEEc
Confidence 5678899999999999999964211 1 122378899999876 788887 6799999999999 6999999985
No 326
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=96.78 E-value=0.022 Score=54.92 Aligned_cols=123 Identities=12% Similarity=0.094 Sum_probs=91.4
Q ss_pred CCHHHHHHHHHHh-h-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMV-C-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e 161 (326)
.+|+++++.++.. . .||..+-+..|.+ +++.-.+.++++|++. ++.+.+-..-+|+..++++
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~~ 245 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVL---------------RGEEEADCIRALHEAFPEARLALDPNGAWKLDEAVR 245 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTCBCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCC---------------CHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHH
Confidence 5788888877764 4 4999999987642 2334456678888775 5567777766899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCC----HHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAK----WGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~----~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+++.+++. +.+|- |. ..+-| ++.++++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 246 ~~~~L~~~-i~~iE-------eP-~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~ 310 (450)
T 3mzn_A 246 VLEPIKHL-LSYAE-------DP-CGQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLA 310 (450)
T ss_dssp HHGGGGGG-CSEEE-------SS-BCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBC
T ss_pred HHHHhhhc-cceee-------CC-CCcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 99999987 76652 21 22334 68889999999999988667888999999996556787754
No 327
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.77 E-value=0.0035 Score=56.45 Aligned_cols=79 Identities=22% Similarity=0.297 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchh
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.+..++|+.+++.|+++|.|..-.. .+.| ..+.+..+++.+++||+..+.|.+..++..+. ..|||+|.++-+.+
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~--~f~G--s~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~-~~GAD~VlLi~a~l 146 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQR--RFQG--SLDDLDAVRASVSIPVLRKDFVVQPYQIHEAR-AHGADMLLLIVAAL 146 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGG--GHHH--HHHHHHHHHHHCSSCEEEESCCCSHHHHHHHH-HTTCSEEEEEGGGS
T ss_pred CCHHHHHHHHHHcCCCEEEEecChh--hcCC--CHHHHHHHHHhCCCCEEECccccCHHHHHHHH-HcCCCEEEEecccC
Confidence 4688999999999999999863211 1111 35788899999999999999999999999998 69999999998877
Q ss_pred cCcc
Q 020428 237 WNAS 240 (326)
Q Consensus 237 ~~P~ 240 (326)
.+..
T Consensus 147 ~~~~ 150 (272)
T 3qja_A 147 EQSV 150 (272)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 6443
No 328
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=96.72 E-value=0.043 Score=49.92 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=68.5
Q ss_pred cCChHHHHHHHHHHhhcccCcEEEEecC-C-CC------h-----HHHHHHHHHHHHcCCcEEEEeecccCCCCC----C
Q 020428 125 LSKPELIHDILTMLKRNLDVPVTCKIRL-L-KS------S-----QDTVELARRIEKTGVSALAVHGRKVADRPR----D 187 (326)
Q Consensus 125 ~~~p~~~~~iv~~v~~~~~~pv~vK~r~-g-~~------~-----~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~----~ 187 (326)
..|-+..+++++..... ++.|-.-+.. | .+ . .++.+..+.+++.|+|.|.+.=.|..+.|. .
T Consensus 111 eeNi~~Tk~vv~~ah~~-gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p 189 (307)
T 3n9r_A 111 EENLELTSKVVKMAHNA-GVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSHGAFKFKGEP 189 (307)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCSSSC
T ss_pred HHHHHHHHHHHHHHHHc-CCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCCCEEEEecCCcccccCCCCCC
Confidence 34555666666666543 5555554433 1 11 0 134555566778999999876555555553 3
Q ss_pred cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCc
Q 020428 188 PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 188 ~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad 227 (326)
..+++.+++|++.+++|++.-||=.-+++..+++.++|-+
T Consensus 190 ~Ld~~~L~~I~~~~~~PLVlHGgS~vp~~~~~~~~~~gg~ 229 (307)
T 3n9r_A 190 KLDFERLQEVKRLTNIPLVLHGASAIPDNVRKSYLDAGGD 229 (307)
T ss_dssp CCCHHHHHHHHHHHCSCEEESSCCCCCHHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHhcCCCCeEEeCCCCcchHHHHHHHHhcCc
Confidence 4689999999887899999999887788888888777643
No 329
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=96.72 E-value=0.017 Score=55.95 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=91.2
Q ss_pred CCCHHHHHHHHHHh-h-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHH
Q 020428 84 TSDAVRALTAAKMV-C-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTV 160 (326)
Q Consensus 84 g~~~~~~~~aa~~~-~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~ 160 (326)
+.+|+++++.|+.. . .||..+-+..|.+ +++.-.+.++++|++. ++.+.+-..-+|+..+++
T Consensus 198 ~~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~rv~avRea~pd~~L~vDaN~~w~~~~Ai 262 (470)
T 3p0w_A 198 AMTPAAIARLAEAATERYGFADFKLKGGVM---------------PGAEEMEAIAAIKARFPHARVTLDPNGAWSLNEAI 262 (470)
T ss_dssp BCSHHHHHHHHHHHHHHHCCSEEEEECSSS---------------CHHHHHHHHHHHHHHCTTSEEEEECTTBBCHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC---------------CHHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHH
Confidence 35788888877754 4 4999999987642 2333456678888775 566777776689999999
Q ss_pred HHHHHHHHcCCcEEEEeecccCCCCCCcCC----HHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 161 ELARRIEKTGVSALAVHGRKVADRPRDPAK----WGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 161 e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~----~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
++++.+++. +.+| +|. ..+-| ++.++++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 263 ~~~~~Le~~-l~~i-------EeP-~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~ 328 (470)
T 3p0w_A 263 ALCKGQGHL-VAYA-------EDP-CGPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLA 328 (470)
T ss_dssp HHHTTCTTT-CSEE-------ESC-BCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBC
T ss_pred HHHHhcccc-ceee-------cCC-CChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEe
Confidence 999999887 6665 121 23334 68889999999999988767888999999996555777654
No 330
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=96.68 E-value=0.0064 Score=55.36 Aligned_cols=84 Identities=19% Similarity=0.171 Sum_probs=59.6
Q ss_pred HHHHHHHHHHcCCcEEEEeec-ccCCCCC----CcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 159 TVELARRIEKTGVSALAVHGR-KVADRPR----DPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r-~~~~~~~----~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
..+.|+.++++|++.|.+--+ +.+..+. ...+.+.++++++.+++||++-+++...++++.+. ..|||.| -..
T Consensus 30 ~~e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v~iPvl~k~~i~~ide~qil~-aaGAD~I-d~s 107 (297)
T 4adt_A 30 NVEQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCISINVLAKVRIGHFVEAQILE-ELKVDML-DES 107 (297)
T ss_dssp SHHHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTCCSEEEEEEETTCHHHHHHHH-HTTCSEE-EEE
T ss_pred cHHHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhcCCCEEEeccCCcHHHHHHHH-HcCCCEE-EcC
Confidence 458899999999999987621 1222222 23578999999999999999988888888888777 6999999 222
Q ss_pred chhcCcccccc
Q 020428 234 GALWNASIFSS 244 (326)
Q Consensus 234 ~~l~~P~lf~~ 244 (326)
..+..+.+...
T Consensus 108 ~~~~~~~li~~ 118 (297)
T 4adt_A 108 EVLTMADEYNH 118 (297)
T ss_dssp TTSCCSCSSCC
T ss_pred CCCCHHHHHHH
Confidence 22334455443
No 331
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=96.66 E-value=0.006 Score=57.21 Aligned_cols=97 Identities=18% Similarity=0.215 Sum_probs=68.7
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcE
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPV 205 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPV 205 (326)
+++...+.++.+++.-..++.+-+. .. .+..+.++.+.++|+|.|+++.-. + . .+...+.++++++.. ++||
T Consensus 80 s~e~~~~~i~~vk~~~~l~vga~vg--~~-~~~~~~~~~lieaGvd~I~idta~--G-~-~~~~~~~I~~ik~~~p~v~V 152 (366)
T 4fo4_A 80 SIEQQAAQVHQVKISGGLRVGAAVG--AA-PGNEERVKALVEAGVDVLLIDSSH--G-H-SEGVLQRIRETRAAYPHLEI 152 (366)
T ss_dssp CHHHHHHHHHHHHTTTSCCCEEECC--SC-TTCHHHHHHHHHTTCSEEEEECSC--T-T-SHHHHHHHHHHHHHCTTCEE
T ss_pred CHHHHHHHHHHHHhcCceeEEEEec--cC-hhHHHHHHHHHhCCCCEEEEeCCC--C-C-CHHHHHHHHHHHHhcCCCce
Confidence 4778888888888753344444332 22 245677889999999999986321 0 1 112246678888886 7888
Q ss_pred EEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 206 IANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 206 i~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++ |.+.|+++++++. +.|||+|.+|
T Consensus 153 i~-G~v~t~e~A~~a~-~aGAD~I~vG 177 (366)
T 4fo4_A 153 IG-GNVATAEGARALI-EAGVSAVKVG 177 (366)
T ss_dssp EE-EEECSHHHHHHHH-HHTCSEEEEC
T ss_pred Ee-eeeCCHHHHHHHH-HcCCCEEEEe
Confidence 76 7789999999998 6899999995
No 332
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=96.65 E-value=0.028 Score=51.48 Aligned_cols=101 Identities=16% Similarity=0.204 Sum_probs=65.7
Q ss_pred cCChHHHHHHHHHHhhcccCcEEEEecC-CC-C----h----HHHHHHHHHHHHcCCcEEEEeecccCCCCC--C--c--
Q 020428 125 LSKPELIHDILTMLKRNLDVPVTCKIRL-LK-S----S----QDTVELARRIEKTGVSALAVHGRKVADRPR--D--P-- 188 (326)
Q Consensus 125 ~~~p~~~~~iv~~v~~~~~~pv~vK~r~-g~-~----~----~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~--~--~-- 188 (326)
..|-+..+++++..... ++.|-.-+.. |. + . .++.+..+.+++.|+|.|.+.=.|..+.|. + .
T Consensus 112 eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~ 190 (323)
T 2isw_A 112 DENVRITKEVVAYAHAR-SVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELTGVDALAVAIGTSHGAYKFKSESDIR 190 (323)
T ss_dssp HHHHHHHHHHHHHHHTT-TCEEEEEESCC----------CCCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCCCC----C
T ss_pred HHHHHHHHHHHHHHHHc-CCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCCcccc
Confidence 34555566666655433 5555444433 11 1 0 235666677778999999876555555554 3 3
Q ss_pred CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCC
Q 020428 189 AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGA 226 (326)
Q Consensus 189 ~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Ga 226 (326)
.+++.+++|++.+++|++.-||=.-+++..+++.++|-
T Consensus 191 L~~~~L~~I~~~~~vpLVlHGgSsvp~~~~~~~~~~gg 228 (323)
T 2isw_A 191 LAIDRVKTISDLTGIPLVMHGSSSVPKDVKDMINKYGG 228 (323)
T ss_dssp CCCHHHHHHHHHHCSCEEECSCCCCCHHHHHHHHHTTC
T ss_pred cCHHHHHHHHHHhCCCeEEECCCCCCHHHHHHHHHhcc
Confidence 57899999999999999999987667777777766653
No 333
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=96.65 E-value=0.051 Score=49.09 Aligned_cols=109 Identities=16% Similarity=0.209 Sum_probs=73.7
Q ss_pred cCChHHHHHHHHHHhhcccCcEEEEecC--CCC---------hHHHHHHHHHHHHcCCcEEEEeecccCCCCCC--cCCH
Q 020428 125 LSKPELIHDILTMLKRNLDVPVTCKIRL--LKS---------SQDTVELARRIEKTGVSALAVHGRKVADRPRD--PAKW 191 (326)
Q Consensus 125 ~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g~~---------~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~--~~~~ 191 (326)
..|-+..+++++..... ++.|-.-+.. |.+ ..++.+..+.+++.|+|.|.+.=.|..+.|.+ ..|+
T Consensus 117 eeNi~~Tk~vv~~ah~~-gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~ 195 (288)
T 3q94_A 117 EENVETTKKVVEYAHAR-NVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSVHGPYKGEPNLGF 195 (288)
T ss_dssp HHHHHHHHHHHHHHHTT-TCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCH
T ss_pred HHHHHHHHHHHHHHHHc-CCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcccCCcCCCCccCH
Confidence 34555566666655443 5555554433 111 12355666677789999998765555555543 4589
Q ss_pred HHHHHHHHhcCCcEEEeCCCCC-HHHHHHHHHhcCCcEEEeccch
Q 020428 192 GEIADIVAALSIPVIANGDVFE-YDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 192 ~~i~~i~~~~~iPVi~nGgI~s-~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+.+++|++.+++|++.-||=.. .+++++++ ..|+.-|=|++.+
T Consensus 196 ~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai-~~Gv~KiNi~Tdl 239 (288)
T 3q94_A 196 AEMEQVRDFTGVPLVLHGGTGIPTADIEKAI-SLGTSKINVNTEN 239 (288)
T ss_dssp HHHHHHHHHHCSCEEECCCTTCCHHHHHHHH-HTTEEEEEECHHH
T ss_pred HHHHHHHHhcCCCEEEeCCCCCCHHHHHHHH-HcCCeEEEEChHH
Confidence 9999999999999998876554 46688888 6898888888764
No 334
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=96.64 E-value=0.022 Score=51.58 Aligned_cols=123 Identities=14% Similarity=0.146 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~ 87 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGT----------TGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEAIS 87 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHH
Confidence 477888888887765 9999988642 33344445666677777776655 578887774 256789999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..- .|..+. -++.++.|.+++++||+ +| |---+++.+.++.+
T Consensus 88 la~~a~~~Gadavlv~~P----~y~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLTVTP----YYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAK 153 (292)
T ss_dssp HHHHTTTSSCSEEEEECC----CSSCCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCEEEECCC----CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHc
Confidence 999999999999987633 222232 24556788888899986 45 43457888888763
No 335
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=96.63 E-value=0.029 Score=50.43 Aligned_cols=116 Identities=18% Similarity=0.141 Sum_probs=79.8
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCC-cEEEEe-ecccC-CCCCCcCCHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGV-SALAVH-GRKVA-DRPRDPAKWGEIAD 196 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~-d~i~vh-~r~~~-~~~~~~~~~~~i~~ 196 (326)
-|+..+.+..++.++- .++.||.+|.....+.++....+..+...|. +.+.+| |-+.- .......|+..+..
T Consensus 127 Igs~~~~n~~ll~~~a-----~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~ 201 (276)
T 1vs1_A 127 IGARNMQNFPLLREVG-----RSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAV 201 (276)
T ss_dssp ECGGGTTCHHHHHHHH-----HHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHH
T ss_pred ECcccccCHHHHHHHH-----ccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHH
Confidence 4577788887766653 3589999999876678888888888999998 455566 44222 22345678898999
Q ss_pred HHHhcCCcEEE-eC---CCCC--HHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 197 IVAALSIPVIA-NG---DVFE--YDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 197 i~~~~~iPVi~-nG---gI~s--~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+++..++||++ .. |.++ ..-....+ ..||+|+||=+-+--+..+
T Consensus 202 lk~~~~lpVi~dssH~~g~~~~~~~~~~aAv-a~Ga~Gl~IE~H~~~d~a~ 251 (276)
T 1vs1_A 202 LKEATHLPVIVDPSHPAGRRSLVPALAKAGL-AAGADGLIVEVHPNPEEAL 251 (276)
T ss_dssp HHHHBSSCEEECCHHHHCSGGGHHHHHHHHH-HTTCSEEEEEBCSSGGGCS
T ss_pred HHHHhCCCEEEeCCCCCCccchHHHHHHHHH-HcCCCEEEEEecCCcccCC
Confidence 99988999975 22 3332 33344455 5899999998765444333
No 336
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=96.60 E-value=0.014 Score=50.01 Aligned_cols=82 Identities=16% Similarity=0.265 Sum_probs=63.8
Q ss_pred cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcE-EEeCCCCCHHHHHHHH
Q 020428 143 DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPV-IANGDVFEYDDFQRIK 221 (326)
Q Consensus 143 ~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPV-i~nGgI~s~~d~~~~l 221 (326)
..|+..-++ +.+.++..+.++.+.+.|++.|.+...+ +...+.++++++..++|+ ++.|++.+.+++..++
T Consensus 6 ~~~i~~~i~-~~d~~~~~~~~~~~~~~G~~~i~l~~~~-------~~~~~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~ 77 (212)
T 2v82_A 6 KLPLIAILR-GITPDEALAHVGAVIDAGFDAVEIPLNS-------PQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALA 77 (212)
T ss_dssp SSCEEEECT-TCCHHHHHHHHHHHHHHTCCEEEEETTS-------TTHHHHHHHHHHHHTTTSEEEEECCCSHHHHHHHH
T ss_pred CCCEEEEEe-CCCHHHHHHHHHHHHHCCCCEEEEeCCC-------hhHHHHHHHHHHhCCCCeEEEeccccCHHHHHHHH
Confidence 456666555 4677889999999999999999985432 233577888887777764 4678899999999888
Q ss_pred HhcCCcEEEecc
Q 020428 222 TAAGASSVMAAR 233 (326)
Q Consensus 222 ~~~Gad~VmiGr 233 (326)
..|||+|.+|.
T Consensus 78 -~~Gad~V~~~~ 88 (212)
T 2v82_A 78 -RMGCQLIVTPN 88 (212)
T ss_dssp -HTTCCEEECSS
T ss_pred -HcCCCEEEeCC
Confidence 69999998775
No 337
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=96.60 E-value=0.045 Score=47.67 Aligned_cols=119 Identities=10% Similarity=0.032 Sum_probs=72.8
Q ss_pred CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeec
Q 020428 100 DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGR 179 (326)
Q Consensus 100 ~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r 179 (326)
|++.|-|+.+.- +.. ...+.+.++...+. +.-+.+-+. +..+. +.+...+.+.|-+-+|
T Consensus 88 Ga~~VllghseR-----R~~--------~~e~~~k~~~A~~~-GL~~ivcVg------e~~e~-~~~~~~~~~iIayep~ 146 (225)
T 1hg3_A 88 GAVGTLLNHSEN-----RMI--------LADLEAAIRRAEEV-GLMTMVCSN------NPAVS-AAVAALNPDYVAVEPP 146 (225)
T ss_dssp TCCEEEESCGGG-----CCB--------HHHHHHHHHHHHHH-TCEEEEEES------SHHHH-HHHHTTCCSEEEECCT
T ss_pred CCCEEEECcchh-----cCC--------HHHHHHHHHHHHHC-CCEEEEEeC------CHHHH-HHHhcCCCCEEEEeCh
Confidence 888888865321 111 11244555554433 555555553 22222 4456667787778777
Q ss_pred ccCCCCC--CcCCHHHH---HHH-HHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 180 KVADRPR--DPAKWGEI---ADI-VAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 180 ~~~~~~~--~~~~~~~i---~~i-~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
...+... ..+..+.+ .++ ++.. +++|++.|||.+.+++..+. ..|+||+.||++++.-++
T Consensus 147 waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~-~~~vDG~LVG~a~l~a~~ 213 (225)
T 1hg3_A 147 ELIGTGIPVSKAKPEVITNTVELVKKVNPEVKVLCGAGISTGEDVKKAI-ELGTVGVLLASGVTKAKD 213 (225)
T ss_dssp TTTTTSCCTTTSCTHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEESHHHHTCSS
T ss_pred hhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHH-hCCCCEEEeCHHHHCCcC
Confidence 6554320 13333333 222 2222 68999999999999999888 689999999999887554
No 338
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=96.59 E-value=0.022 Score=49.90 Aligned_cols=96 Identities=22% Similarity=0.259 Sum_probs=73.9
Q ss_pred HHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCC
Q 020428 133 DILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVF 212 (326)
Q Consensus 133 ~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~ 212 (326)
++++.+.+. +|..=+|. .+.++..++++.+.+.|++.|-+.-++ +...+.|+++++.++-.+++.|.|.
T Consensus 26 ~~~~~l~~~---~vv~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t-------~~a~e~I~~l~~~~~~~~iGaGTVl 94 (232)
T 4e38_A 26 TINNQLKAL---KVIPVIAI-DNAEDIIPLGKVLAENGLPAAEITFRS-------DAAVEAIRLLRQAQPEMLIGAGTIL 94 (232)
T ss_dssp HHHHHHHHH---CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEECCC
T ss_pred HHHHHHHhC---CEEEEEEc-CCHHHHHHHHHHHHHCCCCEEEEeCCC-------CCHHHHHHHHHHhCCCCEEeECCcC
Confidence 455555443 45544553 567889999999999999999997664 3347889999998866899999999
Q ss_pred CHHHHHHHHHhcCCcEEEeccchhcCccccc
Q 020428 213 EYDDFQRIKTAAGASSVMAARGALWNASIFS 243 (326)
Q Consensus 213 s~~d~~~~l~~~Gad~VmiGr~~l~~P~lf~ 243 (326)
+.++++.++ ..||++|+..- .+|.+..
T Consensus 95 t~~~a~~Ai-~AGA~fIvsP~---~~~~vi~ 121 (232)
T 4e38_A 95 NGEQALAAK-EAGATFVVSPG---FNPNTVR 121 (232)
T ss_dssp SHHHHHHHH-HHTCSEEECSS---CCHHHHH
T ss_pred CHHHHHHHH-HcCCCEEEeCC---CCHHHHH
Confidence 999999999 69999998753 3554443
No 339
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=96.58 E-value=0.021 Score=51.71 Aligned_cols=114 Identities=12% Similarity=0.123 Sum_probs=74.4
Q ss_pred CCCEEE----EccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEE----ecCC------CChHHHHHHHHH
Q 020428 100 DVAAID----INMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCK----IRLL------KSSQDTVELARR 165 (326)
Q Consensus 100 ~~d~id----lN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK----~r~g------~~~~~~~e~a~~ 165 (326)
|+|++- +|.|.|... ...+.+.+++++..+ .++|+.+= -|.| .+++.....++.
T Consensus 141 GADaV~~l~~i~~Gs~~e~-----------~~l~~la~vv~ea~~-~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRi 208 (307)
T 3fok_A 141 GVDFAKTLVRINLSDAGTA-----------PTLEATAHAVNEAAA-AQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAI 208 (307)
T ss_dssp TCCEEEEEEEECTTCTTHH-----------HHHHHHHHHHHHHHH-TTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHH
T ss_pred CCCEEEEEEEECCCChhHH-----------HHHHHHHHHHHHHHH-cCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHH
Confidence 888755 677766441 223444555555533 38887663 1211 346667777888
Q ss_pred HHHcCCc----EEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCC--CHHHHHHHHH---h-cCCcEEEeccch
Q 020428 166 IEKTGVS----ALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVF--EYDDFQRIKT---A-AGASSVMAARGA 235 (326)
Q Consensus 166 l~~~G~d----~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~--s~~d~~~~l~---~-~Gad~VmiGr~~ 235 (326)
..+.|+| .|-+- |. +.++++.+.+.+||+..||=. +.+++.++.+ + .|+.|+.+||-+
T Consensus 209 AaELGADs~~tivK~~-------y~-----e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNI 276 (307)
T 3fok_A 209 AAGLGNDSSYTWMKLP-------VV-----EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTL 276 (307)
T ss_dssp HHTCSSCCSSEEEEEE-------CC-----TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTT
T ss_pred HHHhCCCcCCCEEEeC-------Cc-----HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhh
Confidence 8999999 88662 11 346888888899998877765 4555554432 4 699999999986
Q ss_pred hc
Q 020428 236 LW 237 (326)
Q Consensus 236 l~ 237 (326)
+.
T Consensus 277 fQ 278 (307)
T 3fok_A 277 LY 278 (307)
T ss_dssp SS
T ss_pred cc
Confidence 55
No 340
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.57 E-value=0.025 Score=51.49 Aligned_cols=125 Identities=17% Similarity=0.109 Sum_probs=84.1
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+.. .+..++++
T Consensus 22 iD~~~l~~lv~~li~~Gv~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~-~~t~~ai~ 90 (300)
T 3eb2_A 22 VRADVMGRLCDDLIQAGVHGLTPLG----------STGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVAS-TSVADAVA 90 (300)
T ss_dssp BCHHHHHHHHHHHHHTTCSCBBTTS----------GGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEE-SSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCC-CCHHHHHH
Confidence 477888888887655 889886653 234444445666677777776665 5788886642 56889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
+++.++++|+|++.+..-.-. ..+...-++.++.|.+.+++||+ +| |--.+++.+.++.
T Consensus 91 la~~a~~~Gadavlv~~P~y~-~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 91 QAKLYEKLGADGILAILEAYF-PLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp HHHHHHHHTCSEEEEEECCSS-CCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCC-CCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 999999999999987543211 01111224566788888899986 55 3335677777775
No 341
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=96.55 E-value=0.17 Score=45.44 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=96.9
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRL 152 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~ 152 (326)
.+.+++.|.+.+.+++...++.+. .++|.||+=..+=.. ..+.+.+.+.+..+|+.+ ++|+.+-+|.
T Consensus 39 ~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~-----------~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt 107 (276)
T 3o1n_A 39 APKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFAN-----------VTTAESVLEAAGAIREIITDKPLLFTFRS 107 (276)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHCCSSCEEEECCB
T ss_pred CcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccc-----------cCcHHHHHHHHHHHHHhcCCCCEEEEEEE
Confidence 345889999999999998888887 499999996532110 123477889999999887 8999998887
Q ss_pred ----C---CChHHHHHHHHHHHHcC-CcEEEEeecccCCCCCCcCCHHHHHHHH---HhcCCcEEEe----CCCCCHHHH
Q 020428 153 ----L---KSSQDTVELARRIEKTG-VSALAVHGRKVADRPRDPAKWGEIADIV---AALSIPVIAN----GDVFEYDDF 217 (326)
Q Consensus 153 ----g---~~~~~~~e~a~~l~~~G-~d~i~vh~r~~~~~~~~~~~~~~i~~i~---~~~~iPVi~n----GgI~s~~d~ 217 (326)
| .+.+...++.+.+.+.| +|+|.|--.. +-+.++++. +..++.||++ .+--+.+++
T Consensus 108 ~~eGG~~~~~~~~~~~ll~~~l~~g~~dyIDvEl~~---------~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el 178 (276)
T 3o1n_A 108 AKEGGEQALTTGQYIDLNRAAVDSGLVDMIDLELFT---------GDDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEI 178 (276)
T ss_dssp GGGTCSBCCCHHHHHHHHHHHHHHTCCSEEEEEGGG---------CHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHH
T ss_pred hhhCCCCCCCHHHHHHHHHHHHhcCCCCEEEEECcC---------CHHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHH
Confidence 2 24567888888888899 9999996432 124455554 3457888876 233344555
Q ss_pred HHHH---HhcCCcEEEecc
Q 020428 218 QRIK---TAAGASSVMAAR 233 (326)
Q Consensus 218 ~~~l---~~~Gad~VmiGr 233 (326)
...+ ...|||.|=+..
T Consensus 179 ~~~~~~~~~~GaDIvKia~ 197 (276)
T 3o1n_A 179 VQRLRKMQELGADIPKIAV 197 (276)
T ss_dssp HHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEEe
Confidence 5443 246888775553
No 342
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=96.54 E-value=0.018 Score=51.38 Aligned_cols=115 Identities=17% Similarity=0.176 Sum_probs=78.0
Q ss_pred cccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEE-Ee-e-cccCCCCCCcCCHHHHHHH
Q 020428 121 GAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALA-VH-G-RKVADRPRDPAKWGEIADI 197 (326)
Q Consensus 121 G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~-vh-~-r~~~~~~~~~~~~~~i~~i 197 (326)
|+..+.+..++.++- + .+.||.+|.....+.++....+..+...|...++ +| | ++.........|+..+..+
T Consensus 113 ga~~~~n~~ll~~~a----~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~l 187 (262)
T 1zco_A 113 GARNSQNFELLKEVG----K-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVV 187 (262)
T ss_dssp CGGGTTCHHHHHHHT----T-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHH
T ss_pred CcccccCHHHHHHHH----h-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHH
Confidence 456677777665543 3 6999999998766888999999999999986555 45 2 1222223345677889999
Q ss_pred HHhcCCcEEEe----CCCCC--HHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 198 VAALSIPVIAN----GDVFE--YDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 198 ~~~~~iPVi~n----GgI~s--~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
++..++||++. +|.+. +.-+.... ..||+|+||=+-+--+..+
T Consensus 188 k~~~~~pVi~d~sH~~g~~~~v~~~~~aAv-a~Ga~Gl~iE~H~~~d~al 236 (262)
T 1zco_A 188 KELSHLPIIVDPSHPAGRRSLVIPLAKAAY-AIGADGIMVEVHPEPEKAL 236 (262)
T ss_dssp HHHBSSCEEECSSTTTCSGGGHHHHHHHHH-HTTCSEEEEEBCSSGGGCS
T ss_pred HhhhCCCEEEEcCCCCCccchHHHHHHHHH-HcCCCEEEEEecCCccccC
Confidence 98889999653 23322 12244455 5899999998865444444
No 343
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=96.54 E-value=0.055 Score=49.52 Aligned_cols=125 Identities=12% Similarity=0.092 Sum_probs=86.4
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..+++++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~ai~l 94 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLG----------ILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAMRRL 94 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEEST----------GGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCc----------cCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHHHHH
Confidence 477888888887765 999998763 234444445666677777776665 678888653 2578899999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC--CcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS--IPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~--iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
++.+++.|+|++.+..-. ...+...-++.++.|.+.++ +||+ +| |---+++.+.++.+
T Consensus 95 a~~A~~~Gadavlv~~P~--~~~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPP--SLRTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVM 160 (313)
T ss_dssp HHHHHHHTCSEEEECCCT--TCCSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECCCC--CCCCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHH
Confidence 999999999999885321 11111122456778888888 9987 43 55567888888774
No 344
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=96.51 E-value=0.029 Score=51.53 Aligned_cols=124 Identities=14% Similarity=0.166 Sum_probs=85.8
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.+ .+||.+-+. +.+..++++
T Consensus 29 iD~~~l~~lv~~li~~Gv~gl~v~G----------tTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~ 97 (318)
T 3qfe_A 29 LDLASQERYYAYLARSGLTGLVILG----------TNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQVLE 97 (318)
T ss_dssp ECHHHHHHHHHHHHTTTCSEEEESS----------GGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCc----------cccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHH
Confidence 367788888887766 999998864 234444445666677777777665 588888663 357889999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcC----CHHHHHHHHHhcCCcEE-Ee-----CCC-CCHHHHHHHHH
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPA----KWGEIADIVAALSIPVI-AN-----GDV-FEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~----~~~~i~~i~~~~~iPVi-~n-----GgI-~s~~d~~~~l~ 222 (326)
+++.+++.|+|++.+..=. .|..|. -+++++.|.+.+++||+ +| .|+ -+++.+.++.+
T Consensus 98 la~~a~~~Gadavlv~~P~---y~~kp~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 98 HINDASVAGANYVLVLPPA---YFGKATTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp HHHHHHHHTCSEEEECCCC---C---CCCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCc---ccCCCCCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 9999999999999875321 111222 25567888888899986 44 244 57888888774
No 345
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=96.51 E-value=0.043 Score=50.21 Aligned_cols=123 Identities=11% Similarity=0.148 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~Gt----------TGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~ 93 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGT----------TAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDSIE 93 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESST----------TTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHH
Confidence 356677777777655 9999988742 33444445667777888887766 578888663 256789999
Q ss_pred HHHHHHHcCC-cEEEEeecccCCCCCCcC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHHH
Q 020428 162 LARRIEKTGV-SALAVHGRKVADRPRDPA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIKT 222 (326)
Q Consensus 162 ~a~~l~~~G~-d~i~vh~r~~~~~~~~~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l~ 222 (326)
+++.+++.|+ |++.+..- .|..+. -+++++.|.+++++||+ +| |--.+++.+.++.+
T Consensus 94 la~~A~~~Ga~davlv~~P----~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 160 (311)
T 3h5d_A 94 FVKEVAEFGGFAAGLAIVP----YYNKPSQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLAD 160 (311)
T ss_dssp HHHHHHHSCCCSEEEEECC----CSSCCCHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHT
T ss_pred HHHHHHhcCCCcEEEEcCC----CCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 9999999997 99987642 122222 24566788888899986 55 54567888777763
No 346
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=96.51 E-value=0.073 Score=48.37 Aligned_cols=103 Identities=14% Similarity=0.130 Sum_probs=70.2
Q ss_pred ccCChHHHHHHHHHHhhcccCcEEEEecC-C--CCh----------HHHHHHHHHHHHcCCcEEEEeecccCCCCC----
Q 020428 124 LLSKPELIHDILTMLKRNLDVPVTCKIRL-L--KSS----------QDTVELARRIEKTGVSALAVHGRKVADRPR---- 186 (326)
Q Consensus 124 l~~~p~~~~~iv~~v~~~~~~pv~vK~r~-g--~~~----------~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~---- 186 (326)
+..|-+..+++++..... ++.|-.-+.. | .+. .++.+..+.+++.|+|.|.+.=.|..+.|.
T Consensus 108 ~eENi~~Tk~vv~~ah~~-gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~ 186 (305)
T 1rvg_A 108 FETNVRETRRVVEAAHAV-GVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGR 186 (305)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHCCSEEEECSSCCSSSBCSSSS
T ss_pred HHHHHHHHHHHHHHHHHc-CCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHCCCEEEEecCccccccCCCCC
Confidence 344555666666666543 5555554443 1 111 235666677778999999876555555554
Q ss_pred CcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCc
Q 020428 187 DPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 187 ~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad 227 (326)
...+++.+++|.+.+++|++.-||=.=++++.+++.++|-+
T Consensus 187 p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~gg~ 227 (305)
T 1rvg_A 187 PFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGE 227 (305)
T ss_dssp CCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTTCC
T ss_pred CccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhccc
Confidence 34689999999999999999999876688888888777744
No 347
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=96.49 E-value=0.0047 Score=58.03 Aligned_cols=103 Identities=17% Similarity=0.306 Sum_probs=65.4
Q ss_pred ccCChHHHHHHHHHHhh-cccCcEEEEecC----C-CChHHHHHHHHHHHHcCCcEEEEeecccC--CCCCCcC-----C
Q 020428 124 LLSKPELIHDILTMLKR-NLDVPVTCKIRL----L-KSSQDTVELARRIEKTGVSALAVHGRKVA--DRPRDPA-----K 190 (326)
Q Consensus 124 l~~~p~~~~~iv~~v~~-~~~~pv~vK~r~----g-~~~~~~~e~a~~l~~~G~d~i~vh~r~~~--~~~~~~~-----~ 190 (326)
.+++|+..... +.+++ +.+.|+...+.. + ++.+...+.++.+ +++++.+|=-... -...+.. .
T Consensus 100 ~l~~~~~~~s~-~~vr~~ap~~~~~anlg~~ql~~~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~~~~~~~~ 175 (368)
T 3vkj_A 100 AIEKAEARESF-AIVRKVAPTIPIIANLGMPQLVKGYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGEPEYQIYA 175 (368)
T ss_dssp HHHCGGGSHHH-HHHHHHCSSSCEEEEEEGGGGGTTCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCCCBCBTHH
T ss_pred ccCCHHHHhhH-HHHHHhCcCcceecCcCeeecCCCCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCCchhhHHH
Confidence 44567654443 33342 347788877765 4 6655544444444 6666666622110 0011222 4
Q ss_pred HHHHHHHHHhcCCcEEEe--CCCCCHHHHHHHHHhcCCcEEEe
Q 020428 191 WGEIADIVAALSIPVIAN--GDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 191 ~~~i~~i~~~~~iPVi~n--GgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
++.++.+++.+++||++= |+-.|++++..+. +.|+|+|.+
T Consensus 176 ~~~i~~i~~~~~vPVivK~vG~g~s~~~A~~l~-~aGad~I~V 217 (368)
T 3vkj_A 176 LEKLRDISKELSVPIIVKESGNGISMETAKLLY-SYGIKNFDT 217 (368)
T ss_dssp HHHHHHHHTTCSSCEEEECSSSCCCHHHHHHHH-HTTCCEEEC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-hCCCCEEEE
Confidence 678899999999999984 5557899999888 699999998
No 348
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=96.49 E-value=0.046 Score=47.63 Aligned_cols=119 Identities=16% Similarity=0.117 Sum_probs=74.8
Q ss_pred CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeec
Q 020428 100 DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGR 179 (326)
Q Consensus 100 ~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r 179 (326)
|++.|-|+.+.-.. . ...+.+.++...+. +.-+.+-+. +..+. +.+...+.+.|-+-+|
T Consensus 85 Ga~~VllghseRR~-----~--------~~e~~~k~~~A~~~-GL~~ivcVg------e~~e~-~~~~~~~~~iIayep~ 143 (226)
T 1w0m_A 85 GGSGVILNHSEAPL-----K--------LNDLARLVAKAKSL-GLDVVVCAP------DPRTS-LAAAALGPHAVAVEPP 143 (226)
T ss_dssp TCCEEEECCTTSCC-----B--------HHHHHHHHHHHHHT-TCEEEEEES------SHHHH-HHHHHTCCSEEEECCG
T ss_pred CCCEEEEeeeeccC-----C--------HHHHHHHHHHHHHC-CCEEEEEeC------CHHHH-HHHhcCCCCEEEEcCh
Confidence 89999987543211 1 12245555555443 555555553 22222 4456678888888777
Q ss_pred ccCCCCC--CcCCHHHHHH----HHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 180 KVADRPR--DPAKWGEIAD----IVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 180 ~~~~~~~--~~~~~~~i~~----i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
...+... ..+..+.+.+ +++.. +++|++.|||.+.+++..+. ..|+||+.||++++.-++
T Consensus 144 waiGtG~~v~t~~~d~~~~~~~~ir~~~~~~~ilyggsV~~~n~~~~~~-~~giDG~LVG~a~l~a~~ 210 (226)
T 1w0m_A 144 ELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAAL-RLGTRGVLLASAAVKAKD 210 (226)
T ss_dssp GGTTTSCCHHHHCHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHH-HTTCSEEEECHHHHTCSS
T ss_pred hhhccCCCCCCCChhHHHHHHHHHHhccCCCEEEEeCCCCcHHHHHHHH-hCCCCEEEECHHHHCCcC
Confidence 6654320 1334443332 22222 68999999999999999888 689999999999887554
No 349
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=96.49 E-value=0.022 Score=52.86 Aligned_cols=88 Identities=19% Similarity=0.235 Sum_probs=63.8
Q ss_pred cccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCC--CcC----CHHHHHHHHHhcCCcEEEe--CCCC
Q 020428 141 NLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPR--DPA----KWGEIADIVAALSIPVIAN--GDVF 212 (326)
Q Consensus 141 ~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~--~~~----~~~~i~~i~~~~~iPVi~n--GgI~ 212 (326)
..+.|+.+.+..+.+.+. +.+.++++|+|+|.+|.....+..+ +.. .++.++++++.+++||+.- |...
T Consensus 114 ~~~~pv~~~i~~~~~~~~---~~~~~~~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~~~~~ 190 (349)
T 1p0k_A 114 NPNGLIFANLGSEATAAQ---AKEAVEMIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRVSVPVIVKEVGFGM 190 (349)
T ss_dssp CSSSCEEEEEETTCCHHH---HHHHHHHTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHCSSCEEEEEESSCC
T ss_pred CCCceeEEeecCCCCHHH---HHHHHHhcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHcCCCEEEEecCCCC
Confidence 358899988876666543 4566788999999998764332211 111 2578899999899999875 5557
Q ss_pred CHHHHHHHHHhcCCcEEEec
Q 020428 213 EYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 213 s~~d~~~~l~~~Gad~VmiG 232 (326)
+.+++..+. +.|+|+|.+.
T Consensus 191 ~~~~a~~a~-~~Gad~I~v~ 209 (349)
T 1p0k_A 191 SKASAGKLY-EAGAAAVDIG 209 (349)
T ss_dssp CHHHHHHHH-HHTCSEEEEE
T ss_pred CHHHHHHHH-HcCCCEEEEc
Confidence 899998888 6899999994
No 350
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=96.49 E-value=0.02 Score=51.92 Aligned_cols=116 Identities=15% Similarity=0.095 Sum_probs=76.8
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCC-cCCHHHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRD-PAKWGEIADIV 198 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~-~~~~~~i~~i~ 198 (326)
.|+..+.+.+++++ +. .++.||.+|....-+.++....+..+...|...+++.-|...-.|.. ..|+..+..++
T Consensus 114 IgA~~~~n~~Ll~~----~a-~~~kPV~lk~G~~~t~~ei~~Av~~i~~~Gn~~i~L~~rg~~~~y~~~~~dl~~i~~lk 188 (292)
T 1o60_A 114 LPAFLARQTDLVEA----MA-KTGAVINVKKPQFLSPSQMGNIVEKIEECGNDKIILCDRGTNFGYDNLIVDMLGFSVMK 188 (292)
T ss_dssp ECGGGTTCHHHHHH----HH-HTTCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHH
T ss_pred ECcccccCHHHHHH----HH-cCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHH
Confidence 35777888875444 43 46899999998765777888888999999986666554543222211 15888899998
Q ss_pred Hhc-CCcEEE-----------eCCCCCH------HHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 199 AAL-SIPVIA-----------NGDVFEY------DDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 199 ~~~-~iPVi~-----------nGgI~s~------~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+.. ++||++ .|+-... .-+.... ..||+|+||=+=+--+..+
T Consensus 189 ~~~~~~pV~~D~sH~~q~p~~~~~~~~g~~~~~~~ia~aAv-a~Ga~Gl~IE~H~~~d~al 248 (292)
T 1o60_A 189 KASKGSPVIFDVTHSLQCRDPFGAASSGRRAQVTELARSGL-AVGIAGLFLEAHPNPNQAK 248 (292)
T ss_dssp HHTTSCCEEEEHHHHCC------------CTTHHHHHHHHH-HHCCSEEEEEEESSGGGCS
T ss_pred hhCCCCCEEEECCCcccccCccccCCCCChhHHHHHHHHHH-HcCCCEEEEEecCCcccCC
Confidence 887 899998 1222222 3333445 5899999998765444444
No 351
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=96.47 E-value=0.071 Score=46.30 Aligned_cols=134 Identities=10% Similarity=0.014 Sum_probs=84.0
Q ss_pred cEEEEE-CCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC--
Q 020428 77 HVVFQM-GTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL-- 153 (326)
Q Consensus 77 p~~vQl-~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g-- 153 (326)
+++.-+ ++.-|.....+++.+.+. |.+.+|..... ++-+...++...+. +.-|++=++..
T Consensus 55 ~VflDlK~~DI~nTv~~~~~~~~~~-d~vTVh~~~G~---------------~~~~~~a~~~~~~~-~~~v~vLts~s~~ 117 (222)
T 4dbe_A 55 EIIVDFKLADIGYIMKSIVERLSFA-NSFIAHSFIGV---------------KGSLDELKRYLDAN-SKNLYLVAVMSHE 117 (222)
T ss_dssp EEEEEEEECSCHHHHHHHHTTCTTC-SEEEEESTTCT---------------TTTHHHHHHHHHHT-TCEEEEEEECSST
T ss_pred eEEEEeeecchHHHHHHHHHHHHhC-CEEEEEcCcCc---------------HHHHHHHHHHHHhc-CCcEEEEEeCCCc
Confidence 677776 455566767677666555 99999853220 11233334443322 33455434432
Q ss_pred -CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHH-HHHHHHHhcCCcEEEe
Q 020428 154 -KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYD-DFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 -~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~-d~~~~l~~~Gad~Vmi 231 (326)
+.......+++..+++|++++++.+. .-+.++.+++.++-.++..+||+-.. +..+++ ..|+|.++|
T Consensus 118 ~~~~~~~~~~a~~a~~~g~~GvV~sat----------~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~-~~Gad~iVV 186 (222)
T 4dbe_A 118 GWSTLFADYIKNVIREISPKGIVVGGT----------KLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAV-CAGADYEII 186 (222)
T ss_dssp TCCCTTHHHHHHHHHHHCCSEEEECTT----------CHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHH-HHTCSEEEE
T ss_pred chHHHHHHHHHHHHHHhCCCEEEECCC----------CHHHHHHHHHhCCCCEEEcCCcccCccCHHHHH-HcCCCEEEE
Confidence 22223477899999999999988542 12456677776644678889997421 455667 589999999
Q ss_pred ccchhcC
Q 020428 232 ARGALWN 238 (326)
Q Consensus 232 Gr~~l~~ 238 (326)
||+++..
T Consensus 187 GR~I~~A 193 (222)
T 4dbe_A 187 GRSIYNA 193 (222)
T ss_dssp CHHHHTS
T ss_pred CHHhcCC
Confidence 9998874
No 352
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=96.45 E-value=0.012 Score=53.12 Aligned_cols=93 Identities=9% Similarity=0.079 Sum_probs=62.2
Q ss_pred HHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCH-HHHHHHHHh-cCCcEEEe
Q 020428 132 HDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKW-GEIADIVAA-LSIPVIAN 208 (326)
Q Consensus 132 ~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~-~~i~~i~~~-~~iPVi~n 208 (326)
.+.++++++.. ..++.|-+. +.+.++.+.++|+|.|.+|..+. .+. +.++.++.. .++++.++
T Consensus 182 ~~av~~ar~~~~~~~I~Vev~-------t~eea~eal~aGaD~I~LDn~~~-------~~~~~~v~~l~~~~~~v~ieaS 247 (284)
T 1qpo_A 182 VDALRAVRNAAPDLPCEVEVD-------SLEQLDAVLPEKPELILLDNFAV-------WQTQTAVQRRDSRAPTVMLESS 247 (284)
T ss_dssp HHHHHHHHHHCTTSCEEEEES-------SHHHHHHHGGGCCSEEEEETCCH-------HHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC-------CHHHHHHHHHcCCCEEEECCCCH-------HHHHHHHHHhhccCCCeEEEEE
Confidence 34556665554 225666553 24566667779999999997532 111 233334331 26899999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
||| |++.+.++. .+|+|++.+|+....-|+
T Consensus 248 GGI-t~~~i~~~a-~tGVD~isvG~l~~~a~~ 277 (284)
T 1qpo_A 248 GGL-SLQTAATYA-ETGVDYLAVGALTHSVRV 277 (284)
T ss_dssp SSC-CTTTHHHHH-HTTCSEEECGGGTSSBCC
T ss_pred CCC-CHHHHHHHH-hcCCCEEEECHHHcCCCC
Confidence 999 488898888 699999999986665554
No 353
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=96.45 E-value=0.027 Score=52.35 Aligned_cols=116 Identities=15% Similarity=0.217 Sum_probs=76.6
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEE--eecccCCCC-CCcCCHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAV--HGRKVADRP-RDPAKWGEIAD 196 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~v--h~r~~~~~~-~~~~~~~~i~~ 196 (326)
-|+..+.+.+++.++ . ..+.||.+|....-+.++....+..+...|..-+++ +|-+.-..| ....|+..+..
T Consensus 195 IgAr~~~n~~LL~~v----a-~~~kPVilk~G~~~tl~ei~~Ave~i~~~GN~~viLceRG~~typ~~~~~~vdl~ai~~ 269 (350)
T 1vr6_A 195 IGARNAQNFRLLSKA----G-SYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPI 269 (350)
T ss_dssp ECGGGTTCHHHHHHH----H-TTCSCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCCTTHHHH
T ss_pred ECcccccCHHHHHHH----H-ccCCcEEEcCCCCCCHHHHHHHHHHHHHCCCCeEEEEeCCCCCCCCcChhhhhHHHHHH
Confidence 344455555544443 2 358999999987667888888889999999866655 333222233 45678888999
Q ss_pred HHHhcCCcEEE-e---CCCCC--HHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 197 IVAALSIPVIA-N---GDVFE--YDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 197 i~~~~~iPVi~-n---GgI~s--~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+++..++||++ . +|-+. ..-....+ ..||+|+||=+-+--+-.+
T Consensus 270 lk~~~~lpVi~dssHs~G~~~~v~~~a~AAv-A~GA~Gl~IE~H~~pd~al 319 (350)
T 1vr6_A 270 IRKESHLPILVDPSHSGGRRDLVIPLSRAAI-AVGAHGIIVEVHPEPEKAL 319 (350)
T ss_dssp HHHHBSSCEEECHHHHHCSGGGHHHHHHHHH-HHTCSEEEEEBCSCGGGCS
T ss_pred HHHhhCCCEEEeCCCCCcccchHHHHHHHHH-HhCCCEEEEEecCCcccCC
Confidence 99988999976 2 23322 33344455 4799999998765444444
No 354
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=96.44 E-value=0.01 Score=55.57 Aligned_cols=86 Identities=19% Similarity=0.229 Sum_probs=60.2
Q ss_pred ccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC--CCCCCcCC---H-HHHHHHHHhcCCcEEEeCCC---C
Q 020428 142 LDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA--DRPRDPAK---W-GEIADIVAALSIPVIANGDV---F 212 (326)
Q Consensus 142 ~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~--~~~~~~~~---~-~~i~~i~~~~~iPVi~nGgI---~ 212 (326)
.+.++..-+...... .+..+.++..|+|++.+|-.... ....+..+ | +.++++++.+++||++=| | .
T Consensus 143 P~~~~ianig~~~~~---e~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~ 218 (365)
T 3sr7_A 143 PHLLLATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VGFGM 218 (365)
T ss_dssp --CCEEEEEETTSCH---HHHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCC
T ss_pred CCCcEEEEeCCCCCH---HHHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCC
Confidence 366776666543332 25677788899999999855321 01122233 3 678999999999999874 6 7
Q ss_pred CHHHHHHHHHhcCCcEEEec
Q 020428 213 EYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 213 s~~d~~~~l~~~Gad~VmiG 232 (326)
+++++..+. +.|+|+|.++
T Consensus 219 s~e~A~~l~-~aGad~I~V~ 237 (365)
T 3sr7_A 219 DVKTIQTAI-DLGVKTVDIS 237 (365)
T ss_dssp CHHHHHHHH-HHTCCEEECC
T ss_pred CHHHHHHHH-HcCCCEEEEe
Confidence 999999988 6999999984
No 355
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=96.42 E-value=0.062 Score=46.31 Aligned_cols=129 Identities=13% Similarity=0.070 Sum_probs=81.4
Q ss_pred cEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcE--EEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPV--TCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv--~vK~r~g 153 (326)
++++-+=-.+.++..+.++.+..++|.+|+++ |-. ...-.++++++++.. +.|+ .+|+-
T Consensus 8 ~lilalD~~~~~~~~~~~~~~~~~vd~ie~g~--~~~--------------~~~G~~~i~~lr~~~~~~~i~ld~~l~-- 69 (218)
T 3jr2_A 8 MIQIALDQTNLTDAVAVASNVASYVDVIEVGT--ILA--------------FAEGMKAVSTLRHNHPNHILVCDMKTT-- 69 (218)
T ss_dssp EEEEEECCSSHHHHHHHHHHHGGGCSEEEECH--HHH--------------HHHTTHHHHHHHHHCTTSEEEEEEEEC--
T ss_pred CeEEEeCCCCHHHHHHHHHHhcCCceEEEeCc--HHH--------------HhcCHHHHHHHHHhCCCCcEEEEEeec--
Confidence 56766656778888888877755899999874 110 111135677787763 4454 56653
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCH-HHHHHHHHhcCCcEEE-eCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKW-GEIADIVAALSIPVIA-NGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~-~~i~~i~~~~~iPVi~-nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
..+ ..+++.+.++|+|.|++|+-.. .... +.++.+++ .+++.+. .=++.|++++..+. ..|+|.+.+
T Consensus 70 d~p---~~~~~~~~~aGad~i~vh~~~~------~~~~~~~~~~~~~-~g~~~~~d~l~~~T~~~~~~~~-~~g~d~v~~ 138 (218)
T 3jr2_A 70 DGG---AILSRMAFEAGADWITVSAAAH------IATIAACKKVADE-LNGEIQIEIYGNWTMQDAKAWV-DLGITQAIY 138 (218)
T ss_dssp SCH---HHHHHHHHHHTCSEEEEETTSC------HHHHHHHHHHHHH-HTCEEEEECCSSCCHHHHHHHH-HTTCCEEEE
T ss_pred ccH---HHHHHHHHhcCCCEEEEecCCC------HHHHHHHHHHHHH-hCCccceeeeecCCHHHHHHHH-HcCccceee
Confidence 222 3467889999999999997532 1112 33344443 3666553 33446788888887 469998776
Q ss_pred ccc
Q 020428 232 ARG 234 (326)
Q Consensus 232 Gr~ 234 (326)
.++
T Consensus 139 ~~~ 141 (218)
T 3jr2_A 139 HRS 141 (218)
T ss_dssp ECC
T ss_pred eec
Confidence 543
No 356
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=96.42 E-value=0.064 Score=45.69 Aligned_cols=130 Identities=14% Similarity=0.133 Sum_probs=78.7
Q ss_pred EEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc-ccCcEEEEecCCCCh
Q 020428 78 VVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN-LDVPVTCKIRLLKSS 156 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~-~~~pv~vK~r~g~~~ 156 (326)
+++.+=-.+.++..+.++.+..++|.|++.. |.. . ..-.++++++++. .+.||.+-+-.....
T Consensus 3 li~a~D~~~~~~~~~~~~~~~~~~diie~G~--p~~--~------------~~g~~~i~~ir~~~~~~~i~~~~~~~~~~ 66 (211)
T 3f4w_A 3 LQLALDELTLPEAMVFMDKVVDDVDIIEVGT--PFL--I------------REGVNAIKAIKEKYPHKEVLADAKIMDGG 66 (211)
T ss_dssp EEEEECSCCHHHHHHHHHHHGGGCSEEEECH--HHH--H------------HHTTHHHHHHHHHCTTSEEEEEEEECSCH
T ss_pred EEEEeCCCCHHHHHHHHHHhhcCccEEEeCc--HHH--H------------hccHHHHHHHHHhCCCCEEEEEEEeccch
Confidence 3444433567777777777755889999865 432 1 1113567888876 478886533222212
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHH-HHHHHHHhcCCcEEEe-CCCCCH-HHHHHHHHhcCCcEEEecc
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWG-EIADIVAALSIPVIAN-GDVFEY-DDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~-~i~~i~~~~~iPVi~n-GgI~s~-~d~~~~l~~~Gad~VmiGr 233 (326)
..+++.+.++|+|.|++|+... ..+.+ .++.++ ..+++++.. =+..|+ +.+..+. +.|+|.|.+..
T Consensus 67 ---~~~~~~~~~~Gad~v~v~~~~~------~~~~~~~~~~~~-~~g~~~~v~~~~~~t~~~~~~~~~-~~g~d~i~v~~ 135 (211)
T 3f4w_A 67 ---HFESQLLFDAGADYVTVLGVTD------VLTIQSCIRAAK-EAGKQVVVDMICVDDLPARVRLLE-EAGADMLAVHT 135 (211)
T ss_dssp ---HHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHH-HHTCEEEEECTTCSSHHHHHHHHH-HHTCCEEEEEC
T ss_pred ---HHHHHHHHhcCCCEEEEeCCCC------hhHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHH-HcCCCEEEEcC
Confidence 2358889999999999997531 11222 333333 347776642 345665 5566666 68999987754
Q ss_pred c
Q 020428 234 G 234 (326)
Q Consensus 234 ~ 234 (326)
|
T Consensus 136 g 136 (211)
T 3f4w_A 136 G 136 (211)
T ss_dssp C
T ss_pred C
Confidence 3
No 357
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.40 E-value=0.0053 Score=59.78 Aligned_cols=70 Identities=21% Similarity=0.295 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
...+.++.+.++|+|.|.+++- .+. ....|+.++++++.+ ++||+ .|+|.+.+++..++ ..|+|+|.+|.
T Consensus 233 ~~~~~a~~l~~~G~d~ivi~~a--~g~--~~~~~~~i~~l~~~~p~~pvi-~G~v~t~~~a~~~~-~~Gad~I~vg~ 303 (491)
T 1zfj_A 233 DTFERAEALFEAGADAIVIDTA--HGH--SAGVLRKIAEIRAHFPNRTLI-AGNIATAEGARALY-DAGVDVVKVGI 303 (491)
T ss_dssp THHHHHHHHHHHTCSEEEECCS--CTT--CHHHHHHHHHHHHHCSSSCEE-EEEECSHHHHHHHH-HTTCSEEEECS
T ss_pred hHHHHHHHHHHcCCCeEEEeee--cCc--chhHHHHHHHHHHHCCCCcEe-CCCccCHHHHHHHH-HcCCCEEEECc
Confidence 3567788999999999999872 111 123477889999988 89999 89999999999999 69999999985
No 358
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=96.40 E-value=0.052 Score=47.38 Aligned_cols=130 Identities=15% Similarity=0.176 Sum_probs=84.6
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC--
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL-- 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g-- 153 (326)
++.+.++. ++++..+. +.. +.|.|.||.. ..|+. ++.+++.+++|+.=-+|..
T Consensus 72 ~~~v~v~v-~~~ei~~~---i~~~~ld~vQLHG~----------------E~~~~----~~~l~~~~~~~viKa~~v~~~ 127 (228)
T 4aaj_A 72 VFLVSTMV-GFSEWAMA---IERTGAQYIQVHSN----------------ALPQT----IDTLKKEFGVFVMKAFRVPTI 127 (228)
T ss_dssp EEEEECCC-CHHHHHHH---HHHHTCSEEEECSC----------------CCHHH----HHHHHHHHCCEEEEEEECCSS
T ss_pred CEEEeccC-chHHHHHH---HHhccchheecccc----------------cCHHH----HHHHhhccCceEEEEEEeccc
Confidence 45555554 45554443 334 7899999842 23444 4555666677776445542
Q ss_pred -CC-hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 154 -KS-SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 -~~-~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
.. .++.......+....+|++.+... ++.....||++++.+.. +.|++..||++ ++.+.++++..+..||=+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~d~~LlDs~---GGtG~~fDW~~~~~~~~--~~p~iLAGGL~-peNV~~Ai~~~~P~gVDV 201 (228)
T 4aaj_A 128 SKNPEEDANRLLSEISRYNADMVLLDTG---AGSGKLHDLRVSSLVAR--KIPVIVAGGLN-AENVEEVIKVVKPYGVDV 201 (228)
T ss_dssp CSCHHHHHHHHHHHHHHSCCSEEEEEC----------CCCHHHHHHHH--HSCEEEESSCC-TTTHHHHHHHHCCSEEEE
T ss_pred ccchhhhHHHHHHHHhccCCCEEccCCC---CCCcCcCChHHHHHhhh--cCCeEEECCCC-HHHHHHHHHHhCCCEEEe
Confidence 11 234555566677788999988752 22234579999888765 47999999995 788888887789999999
Q ss_pred ccchh
Q 020428 232 ARGAL 236 (326)
Q Consensus 232 Gr~~l 236 (326)
.+|.=
T Consensus 202 sSGVE 206 (228)
T 4aaj_A 202 SSGVE 206 (228)
T ss_dssp SGGGE
T ss_pred CCCCC
Confidence 99964
No 359
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=96.35 E-value=0.058 Score=45.78 Aligned_cols=132 Identities=18% Similarity=0.139 Sum_probs=77.6
Q ss_pred EEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCCh
Q 020428 78 VVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSS 156 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~ 156 (326)
+++-+-..+.++..+.++.+..+++.|+++.+. . .. .| .++++++++.+ +.|+.+-+... +.
T Consensus 3 li~a~d~~~~~~~~~~~~~~~~~v~~iev~~~~--~--~~--~g----------~~~i~~l~~~~~~~~i~~~l~~~-di 65 (207)
T 3ajx_A 3 LQVAIDLLSTEAALELAGKVAEYVDIIELGTPL--I--KA--EG----------LSVITAVKKAHPDKIVFADMKTM-DA 65 (207)
T ss_dssp EEEEECCSCHHHHHHHHHHHGGGCSEEEECHHH--H--HH--HC----------THHHHHHHHHSTTSEEEEEEEEC-SC
T ss_pred EEEEeCCCCHHHHHHHHHHhhccCCEEEECcHH--H--Hh--hC----------HHHHHHHHHhCCCCeEEEEEEec-Cc
Confidence 455555667888888888877788999996531 1 00 11 23577777766 77887633222 31
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE-eCCCCCHHH-HHHHHHhcCCcEEEeccc
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA-NGDVFEYDD-FQRIKTAAGASSVMAARG 234 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~-nGgI~s~~d-~~~~l~~~Gad~VmiGr~ 234 (326)
...+++.+.++|+|+|++|.-.. ....+.+.+..+..++++.. .-...|+++ +..+. ..|+|.|-+..+
T Consensus 66 --~~~~~~~a~~~Gad~v~vh~~~~------~~~~~~~~~~~~~~g~~~gv~~~s~~~p~~~~~~~~-~~g~d~v~~~~~ 136 (207)
T 3ajx_A 66 --GELEADIAFKAGADLVTVLGSAD------DSTIAGAVKAAQAHNKGVVVDLIGIEDKATRAQEVR-ALGAKFVEMHAG 136 (207)
T ss_dssp --HHHHHHHHHHTTCSEEEEETTSC------HHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHH-HTTCSEEEEECC
T ss_pred --cHHHHHHHHhCCCCEEEEeccCC------hHHHHHHHHHHHHcCCceEEEEecCCChHHHHHHHH-HhCCCEEEEEec
Confidence 23356888899999999997532 11122222222223666522 223447766 44444 579999855444
Q ss_pred h
Q 020428 235 A 235 (326)
Q Consensus 235 ~ 235 (326)
.
T Consensus 137 ~ 137 (207)
T 3ajx_A 137 L 137 (207)
T ss_dssp H
T ss_pred c
Confidence 3
No 360
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=96.34 E-value=0.04 Score=53.11 Aligned_cols=123 Identities=13% Similarity=0.097 Sum_probs=90.5
Q ss_pred CCHHHHHHHHHHh-h-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMV-C-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~-~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e 161 (326)
.+|+++++.++.. . .||..+-+..|.+ +++.-.+.++++|++. ++++.+-..-+|+..++++
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~---------------~~~~Di~~v~avRea~pd~~L~vDaN~~w~~~~A~~ 248 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVF---------------EGSKEIDTVIELKKHFPDARITLDPNGCWSLDEAIQ 248 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHCTTCCEEEECTTBSCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCC---------------CHHHHHHHHHHHHHhCCCCeEeecCCCCCCHHHHHH
Confidence 5788888877764 4 3999998877642 2333355677888775 5667777777899999999
Q ss_pred HHHHHHHcCCcEEEEeecccCCCCCCcCC----HHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 162 LARRIEKTGVSALAVHGRKVADRPRDPAK----WGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh~r~~~~~~~~~~~----~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+++.+++. +.+|- |. ..+-| ++.++++++.+++||.+.=-+.+..++.++++...+|.+++
T Consensus 249 ~~~~L~~~-l~~iE-------eP-~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~ 313 (455)
T 3pfr_A 249 LCKGLNDV-LTYAE-------DP-CIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLA 313 (455)
T ss_dssp HHTTCTTT-CSEEE-------SC-BCCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBC
T ss_pred HHHhhccc-ceeee-------cC-CChhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEe
Confidence 99999887 66652 21 22334 68889999999999988667788999999996556787654
No 361
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=96.33 E-value=0.016 Score=52.22 Aligned_cols=90 Identities=9% Similarity=0.087 Sum_probs=62.4
Q ss_pred HHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEe
Q 020428 132 HDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIAN 208 (326)
Q Consensus 132 ~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~n 208 (326)
.+.++++++.. ..|+.|-+. +.+.++.+.++|+|.|.++.. ..+.++++.+.+ ++++.++
T Consensus 186 ~~Av~~ar~~~~~~~IeVEv~-------tl~ea~eAl~aGaD~I~LDn~----------~~~~l~~av~~~~~~v~ieaS 248 (287)
T 3tqv_A 186 AKAVTKAKKLDSNKVVEVEVT-------NLDELNQAIAAKADIVMLDNF----------SGEDIDIAVSIARGKVALEVS 248 (287)
T ss_dssp HHHHHHHHHHCTTSCEEEEES-------SHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHhhCCCCcEEEEeC-------CHHHHHHHHHcCCCEEEEcCC----------CHHHHHHHHHhhcCCceEEEE
Confidence 34555555543 467777553 235566667789999999764 235566655554 7899999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
||| +++.+.++. .+|+|.+.+|.-...-|+
T Consensus 249 GGI-t~~~i~~~a-~tGVD~IsvGalt~sa~~ 278 (287)
T 3tqv_A 249 GNI-DRNSIVAIA-KTGVDFISVGAITKHIKA 278 (287)
T ss_dssp SSC-CTTTHHHHH-TTTCSEEECSHHHHSBCC
T ss_pred CCC-CHHHHHHHH-HcCCCEEEEChhhcCCcc
Confidence 999 578888888 699999999865444443
No 362
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3
Probab=96.33 E-value=0.038 Score=47.73 Aligned_cols=128 Identities=9% Similarity=0.027 Sum_probs=76.7
Q ss_pred CCcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEe--
Q 020428 75 RNHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKI-- 150 (326)
Q Consensus 75 ~~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~-- 150 (326)
+.+++.-+ ++--+.....+++.+.+ |+|.+.+|.. .|. +.+..+++... ..-+.|-.
T Consensus 58 ~~~v~lD~K~~DI~nT~~~~v~~~~~~GaD~vTvh~~----------~G~------~~l~~~~~~~~---~~~~~V~~lt 118 (213)
T 1vqt_A 58 NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSC----------AGY------ESVERALSATD---KHVFVVVKLT 118 (213)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGG----------GCH------HHHHHHHHHCS---SEEEEECCCT
T ss_pred CCCEEEEeecccCchHHHHHHHHHHHCCCCEEEEecc----------CCH------HHHHHHHHhcC---CCeEEEEEeC
Confidence 45677777 34445666666766666 8999999852 121 22223322221 11122222
Q ss_pred cCCCCh-HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHH---H------HHHH
Q 020428 151 RLLKSS-QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYD---D------FQRI 220 (326)
Q Consensus 151 r~g~~~-~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~---d------~~~~ 220 (326)
..+... +.....++. .+.|++ +++.+ +.++++++.++.| +..+||.-.. | ..+
T Consensus 119 s~~~~l~~~v~~~a~~-~e~G~d-vV~~~-------------~~~~~ir~~~~~~-~v~pGI~~~~~~~dq~rv~t~~~- 181 (213)
T 1vqt_A 119 SMEGSLEDYMDRIEKL-NKLGCD-FVLPG-------------PWAKALREKIKGK-ILVPGIRMEVKADDQKDVVTLEE- 181 (213)
T ss_dssp TSCCCHHHHHHHHHHH-HHHTCE-EECCH-------------HHHHHHTTTCCSC-EEECCBC---------CCBCHHH-
T ss_pred CCCHHHHHHHHHHHHH-hcCCCE-EEEcH-------------HHHHHHHHHCCCC-EEECCCCCCCCccchhhcCCHHH-
Confidence 221111 456777888 999999 54422 4567777777778 8888986432 2 566
Q ss_pred HHhcCCcEEEeccchhcCc
Q 020428 221 KTAAGASSVMAARGALWNA 239 (326)
Q Consensus 221 l~~~Gad~VmiGr~~l~~P 239 (326)
+ +.|+|++.+||+++..+
T Consensus 182 i-~aGad~iVvGR~I~~a~ 199 (213)
T 1vqt_A 182 M-KGIANFAVLGREIYLSE 199 (213)
T ss_dssp H-TTTCSEEEESHHHHTSS
T ss_pred H-HCCCCEEEEChhhcCCC
Confidence 7 68999999999988644
No 363
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=96.32 E-value=0.029 Score=51.52 Aligned_cols=95 Identities=18% Similarity=0.248 Sum_probs=71.5
Q ss_pred CChHHHHHHHHHHhhcccCcEEEEecCCCC--hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCC
Q 020428 126 SKPELIHDILTMLKRNLDVPVTCKIRLLKS--SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSI 203 (326)
Q Consensus 126 ~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~--~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~i 203 (326)
..++.+.+.++.+++.++.|+.+-+-.... ..+..+.++.+.+.|+|.|++|... | ++.++.+++. ++
T Consensus 50 ~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~-------p--~~~~~~l~~~-gi 119 (328)
T 2gjl_A 50 PSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND-------P--GEHIAEFRRH-GV 119 (328)
T ss_dssp SSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-------C--HHHHHHHHHT-TC
T ss_pred CCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-------c--HHHHHHHHHc-CC
Confidence 357888888999988777787776544210 2235677888889999999999642 2 5777887765 88
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEe-cc
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMA-AR 233 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~Vmi-Gr 233 (326)
||+. .+.|.+++..+. ..|+|++.+ |+
T Consensus 120 ~vi~--~v~t~~~a~~~~-~~GaD~i~v~g~ 147 (328)
T 2gjl_A 120 KVIH--KCTAVRHALKAE-RLGVDAVSIDGF 147 (328)
T ss_dssp EEEE--EESSHHHHHHHH-HTTCSEEEEECT
T ss_pred CEEe--eCCCHHHHHHHH-HcCCCEEEEECC
Confidence 9885 488999999888 689999998 53
No 364
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=96.28 E-value=0.06 Score=46.56 Aligned_cols=133 Identities=8% Similarity=-0.035 Sum_probs=85.1
Q ss_pred CCcEEEEE-CCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 75 RNHVVFQM-GTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 75 ~~p~~vQl-~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
+.+++.-+ ++.-|.....+++.+.+.+|.+.+|..... ...++ +... +.-|++=++..
T Consensus 50 g~~VflDlK~~DIpnTv~~a~~~~~~~ad~vTvh~~~G~---------~~~~~----------~~~~--~~~v~vLts~s 108 (215)
T 3ve9_A 50 DGIKILDLKLADIDNTMILIVDELKDITNSFIAHAFVGV---------EGSLA----------SLSQ--RVDLFLVLSMS 108 (215)
T ss_dssp CSEEEEEEEECSCHHHHHHHHHHHTTTCSEEEEEGGGCT---------TTTHH----------HHHH--HSEEEEECCCS
T ss_pred CCcEEEEecccCchhHHHHHHHHHHHhhheEEEeCCCCc---------HHHHH----------hHhc--CCCEEEEEecC
Confidence 45777777 455577777666666545899999853220 11111 1111 12245444442
Q ss_pred ---CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCH-HHHHHHHHhcCCcEE
Q 020428 154 ---KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEY-DDFQRIKTAAGASSV 229 (326)
Q Consensus 154 ---~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~-~d~~~~l~~~Gad~V 229 (326)
+..+....+++...++|++++++.+. ..+.++.+++.++-.++..+||+.. .+..+++ ..|+|.+
T Consensus 109 ~~~~~~~~v~~~a~~a~~~G~~GvV~sat----------~~~e~~~ir~~~~~f~~v~pGI~~~g~~~~~a~-~~Gad~i 177 (215)
T 3ve9_A 109 HPGWNDAFYPYLREVARRVNPKGFVAPAT----------RPSMISRVKGDFPDKLVISPGVGTQGAKPGIAL-CHGADYE 177 (215)
T ss_dssp STTCCGGGHHHHHHHHHHHCCSEEECCTT----------SHHHHHHHHHHCTTSEEEECCTTSTTCCTTHHH-HTTCSEE
T ss_pred CcchHHHHHHHHHHHHHHcCCCceeeCCC----------CHHHHHHHHHhCCCcEEEcCCCCcCcCCHHHHH-HcCCCEE
Confidence 22345788899999999999887432 2456677887764478888999842 1566677 5899999
Q ss_pred EeccchhcCc
Q 020428 230 MAARGALWNA 239 (326)
Q Consensus 230 miGr~~l~~P 239 (326)
++||+++..+
T Consensus 178 VvGr~I~~a~ 187 (215)
T 3ve9_A 178 IVGRSVYQSA 187 (215)
T ss_dssp EECHHHHTSS
T ss_pred EeCHHHcCCC
Confidence 9999988743
No 365
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=96.27 E-value=0.032 Score=50.09 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=63.6
Q ss_pred HHHHHHHHHH-hhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHH
Q 020428 87 AVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARR 165 (326)
Q Consensus 87 ~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~ 165 (326)
.+...+.|+. +.+|+|.||||++.+. ...++.+..+++++++.+++|+++-.. + .++++.
T Consensus 33 ~~~a~~~a~~~v~~GAdiIDIg~~s~~------------~eE~~rv~~vi~~l~~~~~~pisIDT~---~----~~v~~a 93 (271)
T 2yci_X 33 PRPIQEWARRQAEKGAHYLDVNTGPTA------------DDPVRVMEWLVKTIQEVVDLPCCLDST---N----PDAIEA 93 (271)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEECCSCS------------SCHHHHHHHHHHHHHHHCCCCEEEECS---C----HHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCcCc------------hhHHHHHHHHHHHHHHhCCCeEEEeCC---C----HHHHHH
Confidence 3444444444 4459999999987632 246788999999999888999999774 2 344555
Q ss_pred HHHc--CCcEEE-EeecccCCCCCCcCCHHHHHHHHHhcCCcEEE
Q 020428 166 IEKT--GVSALA-VHGRKVADRPRDPAKWGEIADIVAALSIPVIA 207 (326)
Q Consensus 166 l~~~--G~d~i~-vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~ 207 (326)
..++ |++.|. +++.. -+++.+..+....+.|+|+
T Consensus 94 al~a~~Ga~iINdvs~~~--------d~~~~~~~~~a~~~~~vv~ 130 (271)
T 2yci_X 94 GLKVHRGHAMINSTSADQ--------WKMDIFFPMAKKYEAAIIG 130 (271)
T ss_dssp HHHHCCSCCEEEEECSCH--------HHHHHHHHHHHHHTCEEEE
T ss_pred HHHhCCCCCEEEECCCCc--------cccHHHHHHHHHcCCCEEE
Confidence 5555 998886 65531 1234455555667889887
No 366
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=96.25 E-value=0.048 Score=50.69 Aligned_cols=44 Identities=11% Similarity=0.358 Sum_probs=38.2
Q ss_pred CcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 187 DPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 187 ~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+...|+.++.+++.+++||+.-| +.+.+++..+. +.|+|+|.+.
T Consensus 202 ~~~~w~~i~~lr~~~~~PvivK~-v~~~e~A~~a~-~~GaD~I~vs 245 (352)
T 3sgz_A 202 ASFCWNDLSLLQSITRLPIILKG-ILTKEDAELAM-KHNVQGIVVS 245 (352)
T ss_dssp TTCCHHHHHHHHHHCCSCEEEEE-ECSHHHHHHHH-HTTCSEEEEC
T ss_pred CCCCHHHHHHHHHhcCCCEEEEe-cCcHHHHHHHH-HcCCCEEEEe
Confidence 45689999999999999998764 68999999988 6999999884
No 367
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=96.25 E-value=0.031 Score=51.14 Aligned_cols=89 Identities=10% Similarity=0.128 Sum_probs=61.5
Q ss_pred HHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEe
Q 020428 132 HDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIAN 208 (326)
Q Consensus 132 ~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~n 208 (326)
.+.++++++.. ..|+.|-+. +.+.++.+.++|+|.|-+... +.+.++++++.+ ++++.++
T Consensus 219 ~~Av~~ar~~~p~~kIeVEVd-------tldea~eAl~aGaD~I~LDn~----------~~~~l~~av~~l~~~v~ieaS 281 (320)
T 3paj_A 219 RQAISTAKQLNPGKPVEVETE-------TLAELEEAISAGADIIMLDNF----------SLEMMREAVKINAGRAALENS 281 (320)
T ss_dssp HHHHHHHHHHSTTSCEEEEES-------SHHHHHHHHHTTCSEEEEESC----------CHHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEEEC-------CHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEE
Confidence 34555555544 356666552 234455566689999999763 346666666655 6899999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
|||+ .+.+.++. .+|+|++.+|.-...-|
T Consensus 282 GGIt-~~~I~~~a-~tGVD~isvGalt~sa~ 310 (320)
T 3paj_A 282 GNIT-LDNLKECA-ETGVDYISVGALTKHLK 310 (320)
T ss_dssp SSCC-HHHHHHHH-TTTCSEEECTHHHHSBC
T ss_pred CCCC-HHHHHHHH-HcCCCEEEECceecCCC
Confidence 9996 88888888 69999999997433333
No 368
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=96.24 E-value=0.4 Score=42.47 Aligned_cols=93 Identities=17% Similarity=0.229 Sum_probs=69.9
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRL 152 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~ 152 (326)
.+.++|-|.|.+.+++.+.++.+.. ++|.||+=+.+=.. ..+++.+.+.+..+++.. +.|+.+-+|.
T Consensus 19 ~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~-----------~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt 87 (258)
T 4h3d_A 19 RPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFEN-----------VENIKEVKEVLYELRSYIHDIPLLFTFRS 87 (258)
T ss_dssp SCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHCTTSCEEEECCC
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccc-----------cCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 3458899999999998887777765 89999996532110 135678899999998876 7999999997
Q ss_pred ----C---CChHHHHHHHHHHHHcC-CcEEEEee
Q 020428 153 ----L---KSSQDTVELARRIEKTG-VSALAVHG 178 (326)
Q Consensus 153 ----g---~~~~~~~e~a~~l~~~G-~d~i~vh~ 178 (326)
| .+.+...++.+.+.+.| +|+|.|--
T Consensus 88 ~~EGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 121 (258)
T 4h3d_A 88 VVEGGEKLISRDYYTTLNKEISNTGLVDLIDVEL 121 (258)
T ss_dssp GGGTCSCCCCHHHHHHHHHHHHHTTCCSEEEEEG
T ss_pred hhhCCCCCCCHHHHHHHHHHHHhcCCchhhHHhh
Confidence 2 24556777777777776 89998864
No 369
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=96.24 E-value=0.11 Score=47.93 Aligned_cols=79 Identities=19% Similarity=0.227 Sum_probs=52.4
Q ss_pred HHHHHHHH--HHcCCcEEEEeec-cc---CCC------CCCcCCHHHHHHHHHhcCCcEE-EeCCCCCHHHHHHHHH---
Q 020428 159 TVELARRI--EKTGVSALAVHGR-KV---ADR------PRDPAKWGEIADIVAALSIPVI-ANGDVFEYDDFQRIKT--- 222 (326)
Q Consensus 159 ~~e~a~~l--~~~G~d~i~vh~r-~~---~~~------~~~~~~~~~i~~i~~~~~iPVi-~nGgI~s~~d~~~~l~--- 222 (326)
....++.+ .+.|+|.+-+--- +. ++. |+.....+.++++.+.+++|+| .+||+ +.+++.++++
T Consensus 190 V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-~~~~fl~~v~~A~ 268 (332)
T 3iv3_A 190 VNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-SAELFQETLVFAH 268 (332)
T ss_dssp HHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-CHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-CHHHHHHHHHHHH
Confidence 66777888 6779999987411 00 011 1111112457777788899965 69998 5666666653
Q ss_pred hcCC--cEEEeccchhcC
Q 020428 223 AAGA--SSVMAARGALWN 238 (326)
Q Consensus 223 ~~Ga--d~VmiGr~~l~~ 238 (326)
+.|| .||.+||....+
T Consensus 269 ~aGa~f~Gv~~GRnvwq~ 286 (332)
T 3iv3_A 269 KAGAKFNGVLCGRATWAG 286 (332)
T ss_dssp HHTCCCCEEEECHHHHTT
T ss_pred HcCCCcceEEeeHHHHHh
Confidence 4789 999999997775
No 370
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=96.21 E-value=0.014 Score=55.21 Aligned_cols=67 Identities=18% Similarity=0.333 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 160 VELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
.+.++.+.++|+|.|.+..-. + ......+.++++++..++||++ |++.|.++++.+. +.|||+|.+|
T Consensus 146 ~e~~~~lveaGvdvIvldta~--G--~~~~~~e~I~~ik~~~~i~Vi~-g~V~t~e~A~~a~-~aGAD~I~vG 212 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAH--G--HSLNIIRTLKEIKSKMNIDVIV-GNVVTEEATKELI-ENGADGIKVG 212 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSC--C--SBHHHHHHHHHHHTTCCCEEEE-EEECSHHHHHHHH-HTTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEeCCC--C--CcccHHHHHHHHHhcCCCeEEE-eecCCHHHHHHHH-HcCCCEEEEe
Confidence 678999999999999874210 0 0111257788888888999986 6889999999998 6999999996
No 371
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=96.18 E-value=0.033 Score=50.21 Aligned_cols=116 Identities=12% Similarity=0.022 Sum_probs=72.8
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCC-CcCCHHHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPR-DPAKWGEIADIV 198 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~-~~~~~~~i~~i~ 198 (326)
.|+..+.+.+++++ + ..++.||.+|....-+.++....+..+...|...+++.-|+..-.|. ...|+..+..++
T Consensus 111 Iga~~~~n~~ll~~----~-a~~~kPV~lk~G~~~t~~e~~~A~~~i~~~Gn~~i~L~~rg~~~~~~~~~~dl~~i~~lk 185 (280)
T 2qkf_A 111 LPAFLARQTDLVVA----M-AKTGNVVNIKKPQFLSPSQMKNIVEKFHEAGNGKLILCERGSSFGYDNLVVDMLGFGVMK 185 (280)
T ss_dssp ECGGGTTBHHHHHH----H-HHTCCEEEEECCTTSCGGGHHHHHHHHHHTTCCCEEEEECCEECSTTCEECCTTHHHHHH
T ss_pred ECcccccCHHHHHH----H-HcCCCcEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHH
Confidence 45677788875544 4 24699999999876577788888899999998666654454332221 125888899999
Q ss_pred Hhc-CCcEEEe-----------CCCCCH------HHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 199 AAL-SIPVIAN-----------GDVFEY------DDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 199 ~~~-~iPVi~n-----------GgI~s~------~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+.. ++||+.. |+-... .-+.... ..||+|+||=+=+--+..+
T Consensus 186 ~~~~~~pV~~D~sH~~q~~~~~~~~s~g~~~~~~~~a~aav-a~Ga~G~~IE~H~~~d~al 245 (280)
T 2qkf_A 186 QTCGNLPVIFDVTHSLQTRDAGSAASGGRRAQALDLALAGM-ATRLAGLFLESHPDPKLAK 245 (280)
T ss_dssp HHTTTCCEEEEHHHHCC----------CHHHHHHHHHHHHH-TTCCSEEEEEC--------
T ss_pred HhCCCCCEEEECCCCccccCccccccCCchhhHHHHHHHHH-HcCCCEEEEeecCCcccCC
Confidence 887 8999983 222222 2233445 6899999998765444333
No 372
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=96.18 E-value=0.098 Score=48.50 Aligned_cols=122 Identities=20% Similarity=0.153 Sum_probs=83.8
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a 163 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++. ...-.+||.+-+. +.+..++++++
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~G----------tTGE~~~Ls~eEr~~vi~~-~~~grvpViaGvg-~~st~eai~la 111 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCG----------SMGDWPLLTDEQRMEGVER-LVKAGIPVIVGTG-AVNTASAVAHA 111 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESS----------GGGTGGGSCHHHHHHHHHH-HHHTTCCEEEECC-CSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCc----------cCcChhhCCHHHHHHHHHH-HhCCCCcEEEecC-CCCHHHHHHHH
Confidence 467788888887665 899988764 2344444455666666666 2222688888774 25678999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCC-cC---CHHHHHHHHH-hcCCcEE-Ee----CCCCCHHHHHHH-HH
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRD-PA---KWGEIADIVA-ALSIPVI-AN----GDVFEYDDFQRI-KT 222 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~-~~---~~~~i~~i~~-~~~iPVi-~n----GgI~s~~d~~~~-l~ 222 (326)
+.+++.|+|++.+..- .|.. +. -++.++.|.+ .+++||+ +| |---+++.+.++ .+
T Consensus 112 ~~A~~~Gadavlv~~P----~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~ 177 (344)
T 2hmc_A 112 VHAQKVGAKGLMVIPR----VLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAE 177 (344)
T ss_dssp HHHHHHTCSEEEECCC----CSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCC----ccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhc
Confidence 9999999999987532 2222 22 2456678888 7899976 55 434578888888 53
No 373
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=96.17 E-value=0.048 Score=49.14 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=74.7
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCC-cCCHHHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRD-PAKWGEIADIV 198 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~-~~~~~~i~~i~ 198 (326)
.|+..+.+.+++++ +. ..+.||.+|....-+.++....++.+.+.|.+-|++--|+..-.|.. ..|+..+..++
T Consensus 116 IgA~~~~n~~LLr~----va-~~gkPVilK~G~~~t~~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk 190 (285)
T 3sz8_A 116 VPAFLARQTDLVVA----IA-KAGKPVNVKKPQFMSPTQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMA 190 (285)
T ss_dssp ECGGGTTCHHHHHH----HH-HTSSCEEEECCTTSCGGGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHH
T ss_pred ECccccCCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHH
Confidence 35777888885554 33 35899999998766777888888999999987777644433222322 26888999999
Q ss_pred Hhc-CCcEEEe---------------CCCCC--HHHHHHHHHhcCCcEEEeccch
Q 020428 199 AAL-SIPVIAN---------------GDVFE--YDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 199 ~~~-~iPVi~n---------------GgI~s--~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+.. ++||++. ||-+. +.-+.... ..||||++|=+=.
T Consensus 191 ~~~~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv-A~GA~gl~IE~H~ 244 (285)
T 3sz8_A 191 ETTGGCPVIFDVTHSLQCRDPLGDASGGRRRQVLDLARAGI-AVGIAGLFLEAHP 244 (285)
T ss_dssp HHTTSCCEEEETTTTCC---------------HHHHHHHHH-HHCCSEEEEEEES
T ss_pred HhCCCCCEEEeCCCccccCCCcCCCCCCchhhHHHHHHHHH-HhCCCEEEEEecc
Confidence 988 5999983 22211 23344555 5899999987643
No 374
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=96.16 E-value=0.1 Score=48.38 Aligned_cols=207 Identities=14% Similarity=0.130 Sum_probs=120.4
Q ss_pred ceEEccccC--CCCH----HHHHHHHHcCCCeEEeCceeccccccccccccc--ccCc-c-c---c--cccCCcceeeec
Q 020428 6 KLVLAPMVR--VGTL----PFRLLAAQYGADITYGEEIIDHKLLKCERRVNE--YIGS-T-D---F--VEKGTDSVVFRT 70 (326)
Q Consensus 6 ~iilAPM~g--~t~~----~fr~~~~~~G~~l~~te~i~~~~l~~~~~~~~~--~~~~-~-~---~--~~~~~~~~~~~~ 70 (326)
++|+|.+.. ..+. .+...+.+.||+.+=-..-.++.+........+ ..++ . + + +..+..+.+.+.
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~ 99 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEY 99 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHH
Confidence 678887764 3342 344667778998775443333332110000000 0000 0 0 0 000011223455
Q ss_pred ccCCCCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEE
Q 020428 71 CHQERNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCK 149 (326)
Q Consensus 71 ~~~~~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK 149 (326)
+.+.+-+++--.+. ++.. ..+.+ ++|.+-| ||.-+.|..+++.+ . ..+.||.+|
T Consensus 100 ~~~~Gi~~~st~~d--~~sv----d~l~~~~v~~~KI--------------~S~~~~n~~LL~~v----a-~~gkPviLs 154 (349)
T 2wqp_A 100 VESKGMIFISTLFS--RAAA----LRLQRMDIPAYKI--------------GSGECNNYPLIKLV----A-SFGKPIILS 154 (349)
T ss_dssp HHHTTCEEEEEECS--HHHH----HHHHHHTCSCEEE--------------CGGGTTCHHHHHHH----H-TTCSCEEEE
T ss_pred HHHhCCeEEEeeCC--HHHH----HHHHhcCCCEEEE--------------CcccccCHHHHHHH----H-hcCCeEEEE
Confidence 56666666655553 2222 22223 4566665 45567777775554 3 359999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcE
Q 020428 150 IRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASS 228 (326)
Q Consensus 150 ~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~ 228 (326)
.... +.++....++.+.+.|.+.+.+|+-+.-.......|+..|..+++.. ++||..++-=....-....+ ..||+
T Consensus 155 tGma-t~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~G~~~~~AAv-AlGA~- 231 (349)
T 2wqp_A 155 TGMN-SIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAV-ALGGS- 231 (349)
T ss_dssp CTTC-CHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSSSSHHHHHHH-HHTCC-
T ss_pred CCCC-CHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCCcHHHHHHHH-HhCCC-
Confidence 9875 77888888899999999888889654333333456889999999998 89998776444456666666 57998
Q ss_pred EEeccchhcCccc
Q 020428 229 VMAARGALWNASI 241 (326)
Q Consensus 229 VmiGr~~l~~P~l 241 (326)
||=+-+--+..+
T Consensus 232 -iIEkH~tld~a~ 243 (349)
T 2wqp_A 232 -ILERHFTDRMDR 243 (349)
T ss_dssp -EEEEEBCSCTTC
T ss_pred -EEEeCCCccccC
Confidence 555444334444
No 375
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=96.15 E-value=0.032 Score=52.71 Aligned_cols=128 Identities=9% Similarity=-0.041 Sum_probs=89.7
Q ss_pred HHHHHHHHHH-hhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHH
Q 020428 87 AVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 87 ~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a 163 (326)
++++.+.++. +..||..+-+..|.+.... .-..+++.-.+.++++|+++ ++++.+-..-+|+..++++++
T Consensus 149 ~e~~~~~a~~~~~~Gf~~~KlKvg~~~~~~-------~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~w~~~~A~~~~ 221 (392)
T 3v5c_A 149 VALMQEEAMQGYAKGQRHFKIKVGRGGRHM-------PLWEGTKRDIAIVRGISEVAGPAGKIMIDANNAYNLNLTKEVL 221 (392)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEECCTTTTTS-------CHHHHHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCCCCccc-------cccccHHHHHHHHHHHHHHcCCCCcEEeeCCCCcCHHHHHHHH
Confidence 4555555544 4459999999887532100 00012456667788888875 678888888889999999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHh-----cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAA-----LSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~-----~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+.+++.++.+| +|.. . .|++..+++++. ..+||...=.+. ..++.++++...+|.+++
T Consensus 222 ~~L~~~~l~~i-------EeP~-~-~d~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~ 284 (392)
T 3v5c_A 222 AALSDVNLYWL-------EAAF-H-EDEALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQY 284 (392)
T ss_dssp HHTTTSCCCEE-------ECSS-S-CCHHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECC
T ss_pred HhcccCCCeEE-------eCCC-C-cCHHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEe
Confidence 99999988876 2222 2 378888888875 578877766677 788889996555787755
No 376
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=96.14 E-value=0.077 Score=51.25 Aligned_cols=121 Identities=12% Similarity=0.113 Sum_probs=86.4
Q ss_pred CHHHHHHHHHH-hhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 86 DAVRALTAAKM-VCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 86 ~~~~~~~aa~~-~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
++++..+.++. ..+ ||..+-+..|.+ +++.-.+.++++++++ +.++.+-..-+|+.++++++
T Consensus 202 ~~~~~~~~~~~~~~~~Gf~~~KlKvG~~---------------~~~~di~~v~avrea~pd~~L~vDaN~~wt~~~Ai~~ 266 (464)
T 4g8t_A 202 TPESVVRLAEAAYEKYGFNDFKLKGGVL---------------DGFEEAEAVTALAKRFPDARITLDPNGAWSLDEAVKI 266 (464)
T ss_dssp SHHHHHHHHHHHHHHHCCSCEEEECSSS---------------CHHHHHHHHHHHHHHSTTCCEEEECTTCBCHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCeEEEeCCCC---------------CHHHHHHHHHHHHhhCCCceEEEECCCccCHHHHHHH
Confidence 45555544443 444 999988876532 3444556788888877 56777777778999999999
Q ss_pred HHHHHHcCCcEEEEeecccCCCCCCc----CCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEE
Q 020428 163 ARRIEKTGVSALAVHGRKVADRPRDP----AKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 163 a~~l~~~G~d~i~vh~r~~~~~~~~~----~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vm 230 (326)
++.+++. +.++ ++. ..+ ...+..+++++.+++||.+.-.+.+..++.++++...+|.++
T Consensus 267 ~~~le~~-l~wi-------EeP-~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~ 329 (464)
T 4g8t_A 267 GKQLKGV-LAYA-------EDP-CGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPL 329 (464)
T ss_dssp HHHTTTT-CSCE-------ESC-BCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEB
T ss_pred HHHhhhc-ccee-------ecC-cCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEe
Confidence 9999865 6554 111 111 235778899999999999999999999999999765567544
No 377
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=96.14 E-value=0.037 Score=52.50 Aligned_cols=97 Identities=10% Similarity=0.110 Sum_probs=75.8
Q ss_pred hHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcE
Q 020428 128 PELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPV 205 (326)
Q Consensus 128 p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPV 205 (326)
++.-.+.++++|+++ ++++.+-...+|+..+++++++.+++.++.+|- | +..+-|++..+++++.+++||
T Consensus 193 ~~~di~~v~avRea~G~~~~L~vDaN~~w~~~~A~~~~~~Le~~~l~~iE-------e-P~~~~d~~~~a~l~~~~~~pi 264 (404)
T 3ekg_A 193 LKKNLEELATMRERVGPDFWLMFDCWMSLDLNYATRLARGAREYGLKWIE-------E-ALPPDDYWGYAELRRNAPTGM 264 (404)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEEE-------C-CSCTTCHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEecCCCCCCHHHHHHHHHHHhhcCCcEEe-------c-CCCcccHHHHHHHHHhcCCCe
Confidence 355667788888887 577888888789999999999999999988872 2 234558999999999998884
Q ss_pred -EEeC-CCCCHHHHHHHHHhcCCcEEEec
Q 020428 206 -IANG-DVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 206 -i~nG-gI~s~~d~~~~l~~~Gad~VmiG 232 (326)
|+.| .+.|..++.++++...+|.+++=
T Consensus 265 ~Ia~gE~~~~~~~~~~li~~~a~dii~~d 293 (404)
T 3ekg_A 265 MVTTGEHEATRWGFRMLLEMGCCDIIQPD 293 (404)
T ss_dssp EEEECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred EEEecCccCCHHHHHHHHHcCCCCeEecC
Confidence 4444 58899999999965557877653
No 378
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.13 E-value=0.074 Score=48.33 Aligned_cols=102 Identities=10% Similarity=0.088 Sum_probs=65.8
Q ss_pred HHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCc-EEEEeecccCCC-CCC-cCC----HHHHHHHHH
Q 020428 129 ELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVS-ALAVHGRKVADR-PRD-PAK----WGEIADIVA 199 (326)
Q Consensus 129 ~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d-~i~vh~r~~~~~-~~~-~~~----~~~i~~i~~ 199 (326)
+...+.+...++.. +.|+.+-+. +.+.++..+.++.++++|+| +|.+|-...... ... ..+ ++.++.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 77 DYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp HHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHH
Confidence 33333344443344 788888775 56788999999999999999 999985322110 000 112 456677777
Q ss_pred hcCCcEEE--eCCCCCHHHH---HHHHHhcCCcEEEec
Q 020428 200 ALSIPVIA--NGDVFEYDDF---QRIKTAAGASSVMAA 232 (326)
Q Consensus 200 ~~~iPVi~--nGgI~s~~d~---~~~l~~~Gad~VmiG 232 (326)
.+++||+. +.++ +.+++ .+.+++.|+|+|.+-
T Consensus 156 ~~~~Pv~vKi~~~~-~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 156 FFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp TCCSCEEEEECCCC-SHHHHHHHHHHHTTSCCCEEEEC
T ss_pred hcCCCEEEEECCCC-CHHHHHHHHHHHHHcCCcEEEec
Confidence 77899874 5555 55554 344557899998774
No 379
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=96.12 E-value=0.02 Score=51.96 Aligned_cols=90 Identities=16% Similarity=0.182 Sum_probs=60.1
Q ss_pred HHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEe
Q 020428 132 HDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIAN 208 (326)
Q Consensus 132 ~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~n 208 (326)
.+.++++++.. ..|+.|-+. +.+.++.+.++|+|.|.+... +.+.+++..+.+ ++++.++
T Consensus 197 ~~Av~~~r~~~p~~~ieVEvd-------tlde~~eAl~aGaD~I~LDn~----------~~~~l~~av~~i~~~v~ieaS 259 (298)
T 3gnn_A 197 GEALDAAFALNAEVPVQIEVE-------TLDQLRTALAHGARSVLLDNF----------TLDMMRDAVRVTEGRAVLEVS 259 (298)
T ss_dssp HHHHHHHHHHC--CCCEEEES-------SHHHHHHHHHTTCEEEEEESC----------CHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEeC-------CHHHHHHHHHcCCCEEEECCC----------CHHHHHHHHHHhCCCCeEEEE
Confidence 34555555543 345555542 223455566689999999764 245555555543 6889999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
||| +.+.+.++. .+|+|++.+|.....-|+
T Consensus 260 GGI-~~~~i~~~a-~tGVD~isvG~lt~sa~~ 289 (298)
T 3gnn_A 260 GGV-NFDTVRAIA-ETGVDRISIGALTKDVRA 289 (298)
T ss_dssp SSC-STTTHHHHH-HTTCSEEECGGGGTSCCC
T ss_pred cCC-CHHHHHHHH-HcCCCEEEECCeecCCCc
Confidence 999 578888888 699999999986554444
No 380
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=96.05 E-value=0.21 Score=43.37 Aligned_cols=134 Identities=11% Similarity=0.041 Sum_probs=78.4
Q ss_pred CcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 76 NHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 76 ~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
.++++-+ ++..|+....+++.+.+ |+|.|.+|.-+ | ++.+...++.+++. +..|++=....
T Consensus 65 ~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~----------G------~~~l~~~~~~~~~~-g~~v~vLt~~s 127 (228)
T 3m47_A 65 CRIIADFKVADIPETNEKICRATFKAGADAIIVHGFP----------G------ADSVRACLNVAEEM-GREVFLLTEMS 127 (228)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTT----------C------HHHHHHHHHHHHHH-TCEEEEECCCC
T ss_pred CeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccC----------C------HHHHHHHHHHHHhc-CCCeEEEEeCC
Confidence 4666666 34556666666666655 99999998532 1 23444555555432 33455533331
Q ss_pred C-C-----hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCC-cEEEeCCCCCH-HHHHHHHHhcC
Q 020428 154 K-S-----SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSI-PVIANGDVFEY-DDFQRIKTAAG 225 (326)
Q Consensus 154 ~-~-----~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~i-PVi~nGgI~s~-~d~~~~l~~~G 225 (326)
. + ......+++...+.|++++++.+. ..+.++++++.++- ..+..+||... .+. +++ ..|
T Consensus 128 ~~~~~~~~~~~~~~~a~~a~~~G~~GvV~~at----------~~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~-~aG 195 (228)
T 3m47_A 128 HPGAEMFIQGAADEIARMGVDLGVKNYVGPST----------RPERLSRLREIIGQDSFLISPGVGAQGGDP-GET-LRF 195 (228)
T ss_dssp SGGGGTTHHHHHHHHHHHHHHTTCCEEECCSS----------CHHHHHHHHHHHCSSSEEEECC----------CG-GGT
T ss_pred CccHHHHHHHHHHHHHHHHHHhCCcEEEECCC----------ChHHHHHHHHhcCCCCEEEecCcCcCCCCH-hHH-HcC
Confidence 1 1 123456788888999999876441 23456777776642 34477888642 256 667 689
Q ss_pred CcEEEeccchhcC
Q 020428 226 ASSVMAARGALWN 238 (326)
Q Consensus 226 ad~VmiGr~~l~~ 238 (326)
+|.+++||+++..
T Consensus 196 ad~iVvGr~I~~a 208 (228)
T 3m47_A 196 ADAIIVGRSIYLA 208 (228)
T ss_dssp CSEEEECHHHHTS
T ss_pred CCEEEECHHHhCC
Confidence 9999999997753
No 381
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=96.05 E-value=0.085 Score=47.62 Aligned_cols=119 Identities=14% Similarity=0.030 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a 163 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.++- |.+-+. +.+..++++++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------TGE~~~Ls~eEr~~v~~~~~~~~~g-ViaGvg-~~~t~~ai~la 84 (288)
T 2nuw_A 17 VNVDALKTHAKNLLEKGIDAIFVNGT----------TGLGPALSKDEKRQNLNALYDVTHK-LIFQVG-SLNLNDVMELV 84 (288)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHTTTCSC-EEEECC-CSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCC-eEEeeC-CCCHHHHHHHH
Confidence 477888888887665 9999988642 3444445677778889999887744 555543 25678999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCC-cC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHH
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRD-PA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQR 219 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~-~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~ 219 (326)
+.++++|+|++.+..- .|.. +. -++.++.|.+++++||+ +| |---+++.+.+
T Consensus 85 ~~A~~~Gadavlv~~P----~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (288)
T 2nuw_A 85 KFSNEMDILGVSSHSP----YYFPRLPEKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKS 146 (288)
T ss_dssp HHHHTSCCSEEEECCC----CSSCSCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTT
T ss_pred HHHHhcCCCEEEEcCC----cCCCCCCHHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhc
Confidence 9999999999987632 2222 22 24566788888899976 45 32235555544
No 382
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=96.04 E-value=0.092 Score=47.32 Aligned_cols=119 Identities=16% Similarity=0.105 Sum_probs=81.8
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a 163 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.++- |.+-+. ..+..++++++
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~Gt----------tGE~~~Ls~~Er~~v~~~~~~~~~g-vi~Gvg-~~~t~~ai~la 83 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGT----------TGLGPALSLQEKMELTDAATSAARR-VIVQVA-SLNADEAIALA 83 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETST----------TTTGGGSCHHHHHHHHHHHHHHCSS-EEEECC-CSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECcc----------ccChhhCCHHHHHHHHHHHHHHhCC-EEEeeC-CCCHHHHHHHH
Confidence 477788888887665 9999988642 3444444667777888888877644 555553 25678999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCC-cC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHH
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRD-PA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQR 219 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~-~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~ 219 (326)
+.++++|+|++.+..- .|.. +. -++.++.|.+++++||+ +| |---+++.+.+
T Consensus 84 ~~A~~~Gadavlv~~P----~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 145 (286)
T 2r91_A 84 KYAESRGAEAVASLPP----YYFPRLSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE 145 (286)
T ss_dssp HHHHHTTCSEEEECCS----CSSTTCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCC----cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh
Confidence 9999999999988633 2222 22 24566788888899986 45 32346666655
No 383
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=96.04 E-value=0.033 Score=47.97 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=63.0
Q ss_pred cEEEEecCC---CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE-------eCCC---
Q 020428 145 PVTCKIRLL---KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA-------NGDV--- 211 (326)
Q Consensus 145 pv~vK~r~g---~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~-------nGgI--- 211 (326)
-||+....+ .+.+.+.++++.++++|++++++. ..+.++++++.+++|+++ .+++
T Consensus 8 ~~~~q~~~~~p~~~~~~~~~~a~~~~~~Ga~~i~~~------------~~~~i~~i~~~~~~pv~~~~~~~~~~~~~~i~ 75 (223)
T 1y0e_A 8 IVSCQALPDEPLHSSFIMSKMALAAYEGGAVGIRAN------------TKEDILAIKETVDLPVIGIVKRDYDHSDVFIT 75 (223)
T ss_dssp EEECCCCTTSTTCCHHHHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHHHCCSCEEEECBCCCTTCCCCBS
T ss_pred EEEecCCCCCCCCCCccHHHHHHHHHHCCCeeeccC------------CHHHHHHHHHhcCCCEEeeeccCCCccccccC
Confidence 345555443 245788999999999999999763 247789999999999974 3455
Q ss_pred CCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 212 FEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 212 ~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
.+.+++..++ ..|+|.|.++.....+|
T Consensus 76 ~~~~~i~~~~-~~Gad~v~l~~~~~~~p 102 (223)
T 1y0e_A 76 ATSKEVDELI-ESQCEVIALDATLQQRP 102 (223)
T ss_dssp CSHHHHHHHH-HHTCSEEEEECSCSCCS
T ss_pred CcHHHHHHHH-hCCCCEEEEeeecccCc
Confidence 5678888888 68999999998877776
No 384
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=96.03 E-value=0.053 Score=50.77 Aligned_cols=88 Identities=17% Similarity=0.265 Sum_probs=65.1
Q ss_pred cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC-------------------------------CC-------
Q 020428 143 DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA-------------------------------DR------- 184 (326)
Q Consensus 143 ~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~-------------------------------~~------- 184 (326)
+.|+++.+=...+.+...+.++.++++|++.|.+|--+.. +.
T Consensus 132 ~~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~ 211 (368)
T 2nli_A 132 GGPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGA 211 (368)
T ss_dssp TCCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTT
T ss_pred CCCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhc
Confidence 5677776643345667788888888999998887633111 00
Q ss_pred CCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 185 PRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 185 ~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
......|+.++.+++.+++||+.-| +.++++++.+. +.|+|+|.+.
T Consensus 212 ~d~~~~~~~i~~lr~~~~~PvivK~-v~~~e~a~~a~-~~Gad~I~vs 257 (368)
T 2nli_A 212 SKQKISPRDIEEIAGHSGLPVFVKG-IQHPEDADMAI-KRGASGIWVS 257 (368)
T ss_dssp BCSBCCHHHHHHHHHHSSSCEEEEE-ECSHHHHHHHH-HTTCSEEEEC
T ss_pred cCchhhHHHHHHHHHHcCCCEEEEc-CCCHHHHHHHH-HcCCCEEEEc
Confidence 0234579999999999999998864 68999999988 6999999984
No 385
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=96.02 E-value=0.16 Score=47.62 Aligned_cols=45 Identities=16% Similarity=0.282 Sum_probs=39.2
Q ss_pred CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 186 RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 186 ~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
....+|+.++++++.+++||+.- |+.++++++.+. +.|+|+|.++
T Consensus 209 ~p~~~~~~i~~i~~~~~~Pv~vk-gv~t~e~a~~a~-~aGad~I~vs 253 (380)
T 1p4c_A 209 DASFNWEALRWLRDLWPHKLLVK-GLLSAEDADRCI-AEGADGVILS 253 (380)
T ss_dssp CTTCCHHHHHHHHHHCCSEEEEE-EECCHHHHHHHH-HTTCSEEEEC
T ss_pred CccccHHHHHHHHHhcCCCEEEE-ecCcHHHHHHHH-HcCCCEEEEc
Confidence 34567999999999999999976 489999999999 6999999994
No 386
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=95.97 E-value=0.32 Score=44.16 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=82.6
Q ss_pred CCcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCc----EEE
Q 020428 75 RNHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVP----VTC 148 (326)
Q Consensus 75 ~~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~p----v~v 148 (326)
+.+++.-+ ++--|.....+++.+.+ |+|.+.+|.. .| ++.+...++..++.-..| |++
T Consensus 76 g~~IflDlKl~DIpnTv~~av~~~a~lGaD~vTVHa~----------~G------~~~m~aa~e~a~~~~~~~~llaVtv 139 (303)
T 3ru6_A 76 DFKIFLDLKFHDIPNTMADACEEVSKLGVDMINIHAS----------AG------KIAIQEVMTRLSKFSKRPLVLAVSA 139 (303)
T ss_dssp CCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG----------GC------HHHHHHHHHHHTTSSSCCEEEEECS
T ss_pred CCCEEEEeeeccCchhHHHHHHHHHhcCCCEEEEecc----------CC------HHHHHHHHHHHHhcCCCceEEEEEE
Confidence 34677666 45556666777776766 9999999852 11 334445555554322222 222
Q ss_pred EecCCC---------C-hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeCCCCCHH--
Q 020428 149 KIRLLK---------S-SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIANGDVFEYD-- 215 (326)
Q Consensus 149 K~r~g~---------~-~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nGgI~s~~-- 215 (326)
.+..+. + .+....+++...++|++++++++. . ++.|++.++ -.++..+||+-..
T Consensus 140 LTS~s~~~l~~l~~~~~~e~V~~lA~~a~~~G~dGvV~s~~----------E---~~~IR~~~~~~fl~VTPGIr~qG~~ 206 (303)
T 3ru6_A 140 LTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSVF----------E---SKKIKEHTSSNFLTLTPGIRPFGET 206 (303)
T ss_dssp CTTCCHHHHHHHHSSCHHHHHHHHHHHHHHTTCSEEECCTT----------T---HHHHHHHSCTTSEEEECCCCTTC--
T ss_pred ecCCCHHHHHHHHcCCHHHHHHHHHHHHHHcCCCEEEECHH----------H---HHHHHHhCCCccEEECCCcCcccCC
Confidence 222210 0 123456788888999999877322 1 456676663 4688899998221
Q ss_pred --------HHHHHHHhcCCcEEEeccchhcCc
Q 020428 216 --------DFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 216 --------d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
++.+++ ..|+|.+++||+++..+
T Consensus 207 ~~DQ~Rv~t~~~a~-~aGAd~iVvGr~I~~a~ 237 (303)
T 3ru6_A 207 NDDQKRVANLAMAR-ENLSDYIVVGRPIYKNE 237 (303)
T ss_dssp ------CCSHHHHH-HTTCSEEEECHHHHTSS
T ss_pred cccccccCCHHHHH-HcCCCEEEEChHHhCCC
Confidence 344566 58999999999988744
No 387
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=95.92 E-value=0.065 Score=50.45 Aligned_cols=109 Identities=18% Similarity=0.194 Sum_probs=74.5
Q ss_pred cccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEE-EeecccC-CC-CCCcCCHHHHHHH
Q 020428 121 GAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALA-VHGRKVA-DR-PRDPAKWGEIADI 197 (326)
Q Consensus 121 G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~-vh~r~~~-~~-~~~~~~~~~i~~i 197 (326)
|+..+.+.++ ++++. ..+.||.+|.....+.++....++.+.+.|..-|+ +|..+.. .. +....|+..+..+
T Consensus 232 gs~~~~n~~L----L~~~a-~~gkPVilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L~~rG~s~yp~~~~~~ldl~~i~~l 306 (385)
T 3nvt_A 232 GARNMQNFEL----LKAAG-RVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDISAVPIL 306 (385)
T ss_dssp CGGGTTCHHH----HHHHH-TSSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHH
T ss_pred CcccccCHHH----HHHHH-ccCCcEEEecCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccccCHHHHHHH
Confidence 4556666644 44443 46999999998877888999999999999986555 5532332 11 2345689999999
Q ss_pred HHhcCCcEEEe----CCCCCH--HHHHHHHHhcCCcEEEeccch
Q 020428 198 VAALSIPVIAN----GDVFEY--DDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 198 ~~~~~iPVi~n----GgI~s~--~d~~~~l~~~Gad~VmiGr~~ 235 (326)
++..++||+.. +|-+.. .-+.... ..||||++|=+=.
T Consensus 307 k~~~~lpV~~D~th~~G~r~~v~~~a~AAv-A~GA~gl~iE~H~ 349 (385)
T 3nvt_A 307 KKETHLPVMVDVTHSTGRKDLLLPCAKAAL-AIEADGVMAEVHP 349 (385)
T ss_dssp HHHBSSCEEEEHHHHHCCGGGHHHHHHHHH-HTTCSEEEEEBCS
T ss_pred HHhcCCCEEEcCCCCCCccchHHHHHHHHH-HhCCCEEEEEecC
Confidence 99889999654 222221 2344556 5899999998643
No 388
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=95.91 E-value=0.28 Score=43.88 Aligned_cols=119 Identities=14% Similarity=0.145 Sum_probs=77.5
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEe
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKI 150 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~ 150 (326)
..+.|+ +-+...|.- .|+++.+ |+|.| +-..+- . ...-|+-..+.-..+.+..-+++|+..+ ..||++-+
T Consensus 26 ~~g~~i-~m~tayDa~----sA~l~e~aG~d~i-lvGdSl-~-~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~ 97 (275)
T 3vav_A 26 EAGEKI-AMLTCYDAS----FAALLDRANVDVQ-LIGDSL-G-NVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADL 97 (275)
T ss_dssp HHTCCE-EEEECCSHH----HHHHHHHTTCSEE-EECTTH-H-HHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred HCCCcE-EEEeCcCHH----HHHHHHHcCCCEE-EECcHH-H-HHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEec
Confidence 333344 345666633 3455555 89999 432111 1 1223333334445667777788888877 48899999
Q ss_pred cCC--CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe
Q 020428 151 RLL--KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIAN 208 (326)
Q Consensus 151 r~g--~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n 208 (326)
..| .++++..+-+..+.++|+++|.+-+.. ...+.|+.+.+ .+|||++.
T Consensus 98 pfgsY~s~~~a~~~a~rl~kaGa~aVklEdg~--------~~~~~i~~l~~-~GIpv~gH 148 (275)
T 3vav_A 98 PFGTYGTPADAFASAVKLMRAGAQMVKFEGGE--------WLAETVRFLVE-RAVPVCAH 148 (275)
T ss_dssp CTTSCSSHHHHHHHHHHHHHTTCSEEEEECCG--------GGHHHHHHHHH-TTCCEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCCEEEECCch--------hHHHHHHHHHH-CCCCEEEe
Confidence 875 467788888888888999999997652 12567777775 48999874
No 389
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=95.90 E-value=0.077 Score=51.88 Aligned_cols=88 Identities=19% Similarity=0.308 Sum_probs=64.6
Q ss_pred cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC---------------------------CCC----------
Q 020428 143 DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA---------------------------DRP---------- 185 (326)
Q Consensus 143 ~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~---------------------------~~~---------- 185 (326)
+.|.++.+-.+.+.+...++++.++++|+++|.||--... ..+
T Consensus 246 ~~~~~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~~~~~~g~~~~~~~g~~~~~~~~ 325 (511)
T 1kbi_A 246 KQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAGPKAMKKTNVEESQGASRALSKF 325 (511)
T ss_dssp SCCEEEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC-------CCCCSSCCCGGGGCBTT
T ss_pred CCCeEEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCcccccccccccccccccHHHHHhhc
Confidence 4577777755566677788888999999998776532110 000
Q ss_pred -CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 186 -RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 186 -~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
.....|+.++.+++.+++||+.- |+.+.+++..+. +.|+|+|.++
T Consensus 326 ~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~-~aGad~I~vs 371 (511)
T 1kbi_A 326 IDPSLTWKDIEELKKKTKLPIVIK-GVQRTEDVIKAA-EIGVSGVVLS 371 (511)
T ss_dssp BCTTCCHHHHHHHHHHCSSCEEEE-EECSHHHHHHHH-HTTCSEEEEC
T ss_pred cChHhHHHHHHHHHHHhCCcEEEE-eCCCHHHHHHHH-HcCCCEEEEc
Confidence 11245999999999999999976 466799999888 6999999993
No 390
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=95.87 E-value=0.045 Score=49.58 Aligned_cols=99 Identities=15% Similarity=0.167 Sum_probs=68.0
Q ss_pred HHHHHHHhh-cccCcEEEEecCCCChHHHHHHHHHHHH-cCCcEEEEeecccCC-----CCCCc--CCHHHHHHHHHhcC
Q 020428 132 HDILTMLKR-NLDVPVTCKIRLLKSSQDTVELARRIEK-TGVSALAVHGRKVAD-----RPRDP--AKWGEIADIVAALS 202 (326)
Q Consensus 132 ~~iv~~v~~-~~~~pv~vK~r~g~~~~~~~e~a~~l~~-~G~d~i~vh~r~~~~-----~~~~~--~~~~~i~~i~~~~~ 202 (326)
.++++.+++ ..+.|+.+-+. +.+.++..+.++.+++ +|+|+|.+|-..... .+... .-.+.++++++.++
T Consensus 86 ~~~~~~~~~~~~~~p~~v~l~-~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~ 164 (311)
T 1ep3_A 86 TEKLPWLNENFPELPIIANVA-GSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSK 164 (311)
T ss_dssp HTHHHHHHHHCTTSCEEEEEC-CSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhcCCCCcEEEEEc-CCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcC
Confidence 335666665 33789888876 3467788999999998 999999987432110 01111 11567788888889
Q ss_pred CcEEE--eCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 203 IPVIA--NGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 203 iPVi~--nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+||+. ..++.+..++.+.+++.|+|+|.+
T Consensus 165 ~pv~vk~~~~~~~~~~~a~~l~~~G~d~i~v 195 (311)
T 1ep3_A 165 VPLYVKLSPNVTDIVPIAKAVEAAGADGLTM 195 (311)
T ss_dssp SCEEEEECSCSSCSHHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHcCCCEEEE
Confidence 99875 346777777555555799999998
No 391
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=95.86 E-value=0.053 Score=50.13 Aligned_cols=123 Identities=8% Similarity=0.021 Sum_probs=85.4
Q ss_pred cEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKS 155 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~ 155 (326)
|+-..+.|.+++++ .+.+..||..+-+-.| ++ -.+.++++|+.+ ++.+.+-..-+|+
T Consensus 121 ~~~~~~~g~~~e~~---~~~~~~G~~~~KiKvg------------------~~-d~~~v~avr~~~~~~~l~vDaN~~~~ 178 (342)
T 2okt_A 121 AYGATASGLSNKQL---ESLKATKPTRIKLKWT------------------PQ-IMHQIRVLRELDFHFQLVIDANESLD 178 (342)
T ss_dssp ECEEEESSCCHHHH---HHHHHHCCSEEEEECC------------------TT-HHHHHHHHTTSSSCCEEEEECTTCCC
T ss_pred eeeEEEecCCHHHH---HHHHHcCCcEEEEEeC------------------HH-HHHHHHHHHHhCCCCeEEEECCCCCC
Confidence 34444424344444 3344459998888654 23 357788888876 4556666666799
Q ss_pred hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 156 SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 156 ~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
.+++ ++++.+++.++.+|- |. ..+.|++..++ +.+++||.+.=.+.+..++.++++...+|.|++=
T Consensus 179 ~~~A-~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~--~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k 244 (342)
T 2okt_A 179 RQDF-TQLQLLAREQVLYIE-------EP-FKDISMLDEVA--DGTIPPIALDEKATSLLDIINLIELYNVKVVVLK 244 (342)
T ss_dssp GGGH-HHHHHHGGGCEEEEE-------CC-CSSGGGGGGSC--TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEEC
T ss_pred HHHH-HHHHHHhhCCCcEEE-------CC-CCCccHHHHHH--hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEC
Confidence 9999 999999998877762 11 22334555544 5678999999899999999999976778988874
No 392
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=95.86 E-value=0.055 Score=49.00 Aligned_cols=109 Identities=17% Similarity=0.145 Sum_probs=75.3
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCC-cCCHHHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRD-PAKWGEIADIV 198 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~-~~~~~~i~~i~ 198 (326)
.|+..+.+.+++.+ +. ..+.||.+|....-+.++....++.+.+.|.+-|++--|+..-.|.. ..|+..+..++
T Consensus 137 IgA~~~~n~~LLr~----va-~~gkPVilK~Gms~t~~ei~~ave~i~~~Gn~~iiL~erg~~y~~~~~~vdl~~i~~lk 211 (298)
T 3fs2_A 137 IPAFLCRQTDLLIA----AA-RTGRVVNVKKGQFLAPWDMKNVLAKITESGNPNVLATERGVSFGYNTLVSDMRALPIMA 211 (298)
T ss_dssp ECGGGTTCHHHHHH----HH-HTTSEEEEECCTTCCGGGHHHHHHHHHTTTCCCEEEEECCEECSSSCEECCTTHHHHHH
T ss_pred ECccccCCHHHHHH----HH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCCCccCHHHHHHHH
Confidence 46777888886554 33 45899999998766778888889999999988777644433222322 25888999999
Q ss_pred HhcCCcEEEe---------------CCCCC--HHHHHHHHHhcCCcEEEeccch
Q 020428 199 AALSIPVIAN---------------GDVFE--YDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 199 ~~~~iPVi~n---------------GgI~s--~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+ .++||++. ||-+. +.-+.... ..||||++|=+=.
T Consensus 212 ~-~~~PV~~D~sHsvq~p~~~~~~s~G~r~~v~~~a~AAv-AlGAdGl~IE~H~ 263 (298)
T 3fs2_A 212 G-LGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAV-AVGVAGFFIETHE 263 (298)
T ss_dssp T-TTSCEEEEHHHHTCCCC--------CGGGHHHHHHHHH-HHCCSEEEEEEES
T ss_pred H-cCCcEEEcCCCccccCCcccCCCCCchhhHHHHHHHHH-HcCCCEEEEEecC
Confidence 8 89999982 33222 23344556 5899999987643
No 393
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=95.85 E-value=0.044 Score=49.61 Aligned_cols=89 Identities=12% Similarity=0.111 Sum_probs=60.8
Q ss_pred HHHHHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEe
Q 020428 132 HDILTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIAN 208 (326)
Q Consensus 132 ~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~n 208 (326)
.+.++.+++.. ..|+.|-++ +.+.++.+.++|+|.|.+...+ .+.++++.+.+ ++.+.++
T Consensus 195 ~~Av~~ar~~~p~~kIeVEv~-------tl~e~~eAl~aGaDiImLDn~s----------~~~l~~av~~~~~~v~leaS 257 (300)
T 3l0g_A 195 TLAIQRLRKNLKNEYIAIECD-------NISQVEESLSNNVDMILLDNMS----------ISEIKKAVDIVNGKSVLEVS 257 (300)
T ss_dssp HHHHHHHHHHSSSCCEEEEES-------SHHHHHHHHHTTCSEEEEESCC----------HHHHHHHHHHHTTSSEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEEC-------CHHHHHHHHHcCCCEEEECCCC----------HHHHHHHHHhhcCceEEEEE
Confidence 45566666553 456666553 3455666677899999997642 34555554433 6889999
Q ss_pred CCCCCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 209 GDVFEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 209 GgI~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
||| |++.+.++. .+|+|.+.+|.-...-|
T Consensus 258 GGI-t~~~i~~~A-~tGVD~IsvGalthsa~ 286 (300)
T 3l0g_A 258 GCV-NIRNVRNIA-LTGVDYISIGCITNSFQ 286 (300)
T ss_dssp SSC-CTTTHHHHH-TTTCSEEECGGGTSSCC
T ss_pred CCC-CHHHHHHHH-HcCCCEEEeCccccCCC
Confidence 999 578888888 69999999995433333
No 394
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=95.83 E-value=0.1 Score=47.23 Aligned_cols=119 Identities=13% Similarity=0.066 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a 163 (326)
-|.+.+.+.++.+.+ |+++|=++. ..|-+..-..+.-.++++.+.+.++- |.+-+. +.+..++++++
T Consensus 17 iD~~~l~~lv~~li~~Gv~gl~~~G----------ttGE~~~Ls~eEr~~v~~~~~~~~~g-viaGvg-~~~t~~ai~la 84 (293)
T 1w3i_A 17 IDKEKLKIHAENLIRKGIDKLFVNG----------TTGLGPSLSPEEKLENLKAVYDVTNK-IIFQVG-GLNLDDAIRLA 84 (293)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESS----------TTTTGGGSCHHHHHHHHHHHHTTCSC-EEEECC-CSCHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECc----------cccChhhCCHHHHHHHHHHHHHHcCC-EEEecC-CCCHHHHHHHH
Confidence 477788888887665 999998864 23444444677778888888887744 555543 25678999999
Q ss_pred HHHHHcCCcEEEEeecccCCCCCC-cC---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHH
Q 020428 164 RRIEKTGVSALAVHGRKVADRPRD-PA---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQR 219 (326)
Q Consensus 164 ~~l~~~G~d~i~vh~r~~~~~~~~-~~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~ 219 (326)
+.++++|+|++.+..- .|.. +. -++.++.|.+++++||+ +| |---+++.+.+
T Consensus 85 ~~A~~~Gadavlv~~P----~y~~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~ 146 (293)
T 1w3i_A 85 KLSKDFDIVGIASYAP----YYYPRMSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE 146 (293)
T ss_dssp HHGGGSCCSEEEEECC----CSCSSCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH
T ss_pred HHHHhcCCCEEEEcCC----CCCCCCCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh
Confidence 9999999999987632 2222 22 24566788888899976 45 32346666655
No 395
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=95.77 E-value=0.048 Score=47.36 Aligned_cols=93 Identities=14% Similarity=0.173 Sum_probs=66.5
Q ss_pred HHHHHHHhhcccCcEEEEecCC---CChH--HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEE
Q 020428 132 HDILTMLKRNLDVPVTCKIRLL---KSSQ--DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVI 206 (326)
Q Consensus 132 ~~iv~~v~~~~~~pv~vK~r~g---~~~~--~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi 206 (326)
.++++.++ -++++++....+ ...+ +..++++.++++|+++|++. ..+.++.+++.+++|++
T Consensus 8 ~~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~a~~~~~~G~~~i~~~------------~~~~i~~i~~~~~~p~i 73 (234)
T 1yxy_A 8 EKLMEQLK--GGIIVSCQALPGEPLYSETGGIMPLMAKAAQEAGAVGIRAN------------SVRDIKEIQAITDLPII 73 (234)
T ss_dssp HHHHHHHT--TSCEEECCCCTTSTTCCTTCCSHHHHHHHHHHHTCSEEEEE------------SHHHHHHHHTTCCSCEE
T ss_pred HHHHHHHh--CCEEEEeeCCCCCCCcCCccchHHHHHHHHHHCCCcEeecC------------CHHHHHHHHHhCCCCEE
Confidence 34666662 245555555432 1245 78899999999999999874 24678899998999997
Q ss_pred Ee-------CCC---CCHHHHHHHHHhcCCcEEEeccchhcCc
Q 020428 207 AN-------GDV---FEYDDFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 207 ~n-------GgI---~s~~d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+. +++ .+.+++..++ ..|||.|.++.....+|
T Consensus 74 ~~~~~~~~~~~~~i~~~~~~i~~~~-~~Gad~V~l~~~~~~~~ 115 (234)
T 1yxy_A 74 GIIKKDYPPQEPFITATMTEVDQLA-ALNIAVIAMDCTKRDRH 115 (234)
T ss_dssp EECBCCCTTSCCCBSCSHHHHHHHH-TTTCSEEEEECCSSCCT
T ss_pred eeEcCCCCccccccCChHHHHHHHH-HcCCCEEEEcccccCCC
Confidence 42 222 2567888888 69999999998877666
No 396
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=95.75 E-value=0.014 Score=57.17 Aligned_cols=70 Identities=14% Similarity=0.183 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
+..+.++.+.++|+|.|.+|.-.. + ....++.++++++.+ ++||++ |+|.|.++++.+. +.|+|+|.+|.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G---~-~~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~-~aGad~I~vg~ 325 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQG---N-SVYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLI-DAGVDGLRVGM 325 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC---C-SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHH-HHTCSEEEECS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCC---c-chhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHH-HcCCCEEEECC
Confidence 357788888999999999976421 1 122468899999988 899986 7899999999998 68999999964
No 397
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=95.75 E-value=0.17 Score=47.45 Aligned_cols=112 Identities=13% Similarity=0.089 Sum_probs=78.5
Q ss_pred cccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCC-cEEEEeecccCCCCCCcCCHHHHHHHHH
Q 020428 121 GAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGV-SALAVHGRKVADRPRDPAKWGEIADIVA 199 (326)
Q Consensus 121 G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~-d~i~vh~r~~~~~~~~~~~~~~i~~i~~ 199 (326)
||.-+.|..+++.+ . ..+.||.+|.... +.++....++.+.+.|. +.+.+|+-+.-.......|+..|..+++
T Consensus 141 gS~~~~N~pLL~~v----a-~~gKPViLStGma-Tl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~ 214 (385)
T 1vli_A 141 ASYEINHLPLLKYV----A-RLNRPMIFSTAGA-EISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAA 214 (385)
T ss_dssp CGGGTTCHHHHHHH----H-TTCSCEEEECTTC-CHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHH
T ss_pred CcccccCHHHHHHH----H-hcCCeEEEECCCC-CHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHH
Confidence 45567777775554 3 3599999999875 78888888999999998 6777786543333334568889999999
Q ss_pred hc-CCcEEEeCCCCC-HHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 200 AL-SIPVIANGDVFE-YDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 200 ~~-~iPVi~nGgI~s-~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
.. ++||..++--.. ..-..... ..||+ ||=+=+--+..+
T Consensus 215 ~f~~lpVG~SdHt~G~~~~~~AAv-AlGA~--iIEkHftldra~ 255 (385)
T 1vli_A 215 AFPEAVIGFSDHSEHPTEAPCAAV-RLGAK--LIEKHFTIDKNL 255 (385)
T ss_dssp HSTTSEEEEEECCSSSSHHHHHHH-HTTCS--EEEEEBCSCTTS
T ss_pred HcCCCCEEeCCCCCCchHHHHHHH-HcCCC--EEEeCCCccccC
Confidence 98 899987754444 55666666 58998 555444334444
No 398
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.74 E-value=0.012 Score=57.51 Aligned_cols=69 Identities=20% Similarity=0.292 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+..+.++.+.++|+|.|.++.... .....++.++++++.. ++||++ |++.+.+++..+. +.|||+|.+|
T Consensus 231 d~~~~a~~l~~aG~d~I~id~a~g----~~~~~~~~i~~ir~~~p~~~Vi~-g~v~t~e~a~~l~-~aGaD~I~Vg 300 (496)
T 4fxs_A 231 GNEERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRAAYPHLEIIG-GNVATAEGARALI-EAGVSAVKVG 300 (496)
T ss_dssp CCHHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCTTCCEEE-EEECSHHHHHHHH-HHTCSEEEEC
T ss_pred chHHHHHHHHhccCceEEeccccc----cchHHHHHHHHHHHHCCCceEEE-cccCcHHHHHHHH-HhCCCEEEEC
Confidence 457788899999999999986531 1223467889999887 799988 8899999999998 6999999986
No 399
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=95.71 E-value=0.29 Score=44.51 Aligned_cols=149 Identities=14% Similarity=0.121 Sum_probs=88.6
Q ss_pred CCCCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEec
Q 020428 73 QERNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIR 151 (326)
Q Consensus 73 ~~~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r 151 (326)
..+.|++ =+...|+- .|+++.+ |++.|=+.-.+=. .. .|+-....-..+.+...++.|...++.||++-+-
T Consensus 26 ~~~~~i~-~~~ayD~~----sA~l~e~aG~dai~vs~~s~a-~~--~G~pD~~~vt~~em~~~~~~I~r~~~~pviaD~d 97 (305)
T 3ih1_A 26 EANEILQ-IPGAHDAM----AALVARNTGFLALYLSGAAYT-AS--KGLPDLGIVTSTEVAERARDLVRATDLPVLVDID 97 (305)
T ss_dssp HSSSCEE-EEBCSSHH----HHHHHHHTTCSCEEECHHHHH-HH--HTCCSSSCSCHHHHHHHHHHHHHHHCCCEEEECT
T ss_pred hCCCcEE-EecCcCHH----HHHHHHHcCCCEEEECcHHHH-Hh--CCCCCCCcCCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 3333443 35566644 3444544 8888877531100 00 1222223345667777788888888999999999
Q ss_pred CCC-ChHHHHHHHHHHHHcCCcEEEEeecccCCC---CC--CcCCH-HHHHHH---HHhcCCcEEEeCCCCCH-------
Q 020428 152 LLK-SSQDTVELARRIEKTGVSALAVHGRKVADR---PR--DPAKW-GEIADI---VAALSIPVIANGDVFEY------- 214 (326)
Q Consensus 152 ~g~-~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~---~~--~~~~~-~~i~~i---~~~~~iPVi~nGgI~s~------- 214 (326)
.|+ ++.+..+.++.++++|+++|++-+.....+ .. .-.+. +.+.+| ++. +.++..++.....
T Consensus 98 ~Gyg~~~~v~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ 176 (305)
T 3ih1_A 98 TGFGGVLNVARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDE 176 (305)
T ss_dssp TCSSSHHHHHHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHH
Confidence 874 466788889999999999999987753211 11 11122 333444 444 5666555554433
Q ss_pred --HHHHHHHHhcCCcEEEe
Q 020428 215 --DDFQRIKTAAGASSVMA 231 (326)
Q Consensus 215 --~d~~~~l~~~Gad~Vmi 231 (326)
++++.+. +.|||+|.+
T Consensus 177 ai~Ra~ay~-eAGAD~i~~ 194 (305)
T 3ih1_A 177 AIERANAYV-KAGADAIFP 194 (305)
T ss_dssp HHHHHHHHH-HHTCSEEEE
T ss_pred HHHHHHHHH-HcCCCEEEE
Confidence 2233333 689999998
No 400
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=95.68 E-value=0.056 Score=48.27 Aligned_cols=105 Identities=14% Similarity=0.122 Sum_probs=63.1
Q ss_pred HHHHHHHHhhcccCcEEEEecCC-CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-----------------CHH
Q 020428 131 IHDILTMLKRNLDVPVTCKIRLL-KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-----------------KWG 192 (326)
Q Consensus 131 ~~~iv~~v~~~~~~pv~vK~r~g-~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-----------------~~~ 192 (326)
+.+.++.+++.-...+..=+-.| ++.+++.++++.++++|+|+|.+..-..+....||. -.+
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~ 83 (268)
T 1qop_A 4 YENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFE 83 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 44455555433222222222233 556889999999999999999995422222222221 135
Q ss_pred HHHHHHHh-cCCcEEEeCCCC-----C-HHHHHHHHHhcCCcEEEeccchh
Q 020428 193 EIADIVAA-LSIPVIANGDVF-----E-YDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 193 ~i~~i~~~-~~iPVi~nGgI~-----s-~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
.++++++. +++||++.+... . .+.+..+. ..|+|++.+.-...
T Consensus 84 ~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~~~~~~~-~aGadgii~~d~~~ 133 (268)
T 1qop_A 84 MLAIIREKHPTIPIGLLMYANLVFNNGIDAFYARCE-QVGVDSVLVADVPV 133 (268)
T ss_dssp HHHHHHHHCSSSCEEEEECHHHHHTTCHHHHHHHHH-HHTCCEEEETTCCG
T ss_pred HHHHHHhcCCCCCEEEEEcccHHHHhhHHHHHHHHH-HcCCCEEEEcCCCH
Confidence 68889888 899998754221 1 24444455 78999999864443
No 401
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=95.68 E-value=0.071 Score=50.73 Aligned_cols=95 Identities=6% Similarity=0.066 Sum_probs=74.8
Q ss_pred hHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC--C
Q 020428 128 PELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS--I 203 (326)
Q Consensus 128 p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~--i 203 (326)
++.-.+.++++++++ ++.+.+-..-+|+.++++++++.+++.++.+| ++ +..+.|++..+++++.++ +
T Consensus 205 ~~~d~~~v~avrea~G~~~~L~vDaN~~~~~~~Ai~~~~~l~~~~i~~i-------Eq-Pl~~~d~~~~~~l~~~~~~~i 276 (415)
T 2p3z_A 205 IRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWI-------EE-CLPPQQYEGYRELKRNAPAGM 276 (415)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEEECTTCCCHHHHHHHHHHHGGGTCCEE-------EC-CSCTTCHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCCceE-------eC-CCCcchHHHHHHHHHhcCCCC
Confidence 445567788888876 46666766667999999999999999988876 22 224558999999999887 8
Q ss_pred cEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 204 PVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 204 PVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
||.+.=.+.+..++.++++.. +|.|++
T Consensus 277 pIa~dE~~~~~~~~~~~i~~~-~d~i~i 303 (415)
T 2p3z_A 277 MVTSGEHHGTLQSFRTLAETG-IDIMQP 303 (415)
T ss_dssp EEEECTTCCSHHHHHHHHHTT-CSEECC
T ss_pred cEEcCCCCCCHHHHHHHHHcC-CCEEEe
Confidence 988887889999999999654 998876
No 402
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=95.66 E-value=0.11 Score=46.06 Aligned_cols=102 Identities=12% Similarity=0.096 Sum_probs=61.5
Q ss_pred HHHHHHHHhhcccCcEEEEecCC-CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-----------------CHH
Q 020428 131 IHDILTMLKRNLDVPVTCKIRLL-KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-----------------KWG 192 (326)
Q Consensus 131 ~~~iv~~v~~~~~~pv~vK~r~g-~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-----------------~~~ 192 (326)
+.+.++.+++.-...+..=+-.| ++.+++.++++.++++|+|.|.+-.-..+....+|. -++
T Consensus 4 ~~~~f~~~~~~~~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~ 83 (262)
T 2ekc_A 4 ISDKFTELKEKREKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLE 83 (262)
T ss_dssp HHHHHHHHHHHTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHH
Confidence 34445555433122222222244 567889999999999999999994322221112221 135
Q ss_pred HHHHHHHhc-CCcEEEeCCCCC------HHHHHHHHHhcCCcEEEecc
Q 020428 193 EIADIVAAL-SIPVIANGDVFE------YDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 193 ~i~~i~~~~-~iPVi~nGgI~s------~~d~~~~l~~~Gad~VmiGr 233 (326)
.++++++.+ ++|++..|.... .+.+..+. ..|+||+.+.-
T Consensus 84 ~v~~ir~~~~~~Pi~~m~y~n~v~~~g~~~f~~~~~-~aG~dgvii~d 130 (262)
T 2ekc_A 84 LSETLRKEFPDIPFLLMTYYNPIFRIGLEKFCRLSR-EKGIDGFIVPD 130 (262)
T ss_dssp HHHHHHHHCTTSCEEEECCHHHHHHHCHHHHHHHHH-HTTCCEEECTT
T ss_pred HHHHHHhhcCCCCEEEEecCcHHHHhhHHHHHHHHH-HcCCCEEEECC
Confidence 578888888 999998653321 23334444 79999999963
No 403
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=95.58 E-value=0.05 Score=46.16 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=61.6
Q ss_pred CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeCCCCCHHHHHHHHH
Q 020428 144 VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIANGDVFEYDDFQRIKT 222 (326)
Q Consensus 144 ~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nGgI~s~~d~~~~l~ 222 (326)
.|+..=+| +.+.++..++++.+.+.|++.|.+|.++. ...+.++++++.++ -.+++.|-+.|++++..+.
T Consensus 10 ~~~i~~~~-~~~~~~~~~~~~~~~~~G~~~iev~~~~~-------~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~- 80 (205)
T 1wa3_A 10 HKIVAVLR-ANSVEEAKEKALAVFEGGVHLIEITFTVP-------DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAV- 80 (205)
T ss_dssp HCEEEEEC-CSSHHHHHHHHHHHHHTTCCEEEEETTST-------THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHH-
T ss_pred CCEEEEEe-cCCHHHHHHHHHHHHHCCCCEEEEeCCCh-------hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHH-
Confidence 46666666 35678899999999999999999997642 12456788887652 2356677789999999998
Q ss_pred hcCCcEEEeccc
Q 020428 223 AAGASSVMAARG 234 (326)
Q Consensus 223 ~~Gad~VmiGr~ 234 (326)
..|||.| ++-+
T Consensus 81 ~~Gad~i-v~~~ 91 (205)
T 1wa3_A 81 ESGAEFI-VSPH 91 (205)
T ss_dssp HHTCSEE-ECSS
T ss_pred HcCCCEE-EcCC
Confidence 5899999 7654
No 404
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=95.58 E-value=0.09 Score=46.98 Aligned_cols=108 Identities=17% Similarity=0.103 Sum_probs=69.9
Q ss_pred HHHHHHHHHhhcccCcEEEEecCC-CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCc-----------------CCH
Q 020428 130 LIHDILTMLKRNLDVPVTCKIRLL-KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDP-----------------AKW 191 (326)
Q Consensus 130 ~~~~iv~~v~~~~~~pv~vK~r~g-~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~-----------------~~~ 191 (326)
.+.+..+.+++.-...+..=+-.| ++.+.+.++++.++++|+|.|.+--=-.+....|| .-+
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 345556666554344455555555 57789999999999999999998522222222221 115
Q ss_pred HHHHHHHHh-cCCcEEEeCCCCC-----HHHHHHHHHhcCCcEEEeccchhc
Q 020428 192 GEIADIVAA-LSIPVIANGDVFE-----YDDFQRIKTAAGASSVMAARGALW 237 (326)
Q Consensus 192 ~~i~~i~~~-~~iPVi~nGgI~s-----~~d~~~~l~~~Gad~VmiGr~~l~ 237 (326)
+.++++++. +++||+.-|-... .+...+...+.|+||+.+.---+.
T Consensus 84 ~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~e 135 (267)
T 3vnd_A 84 DIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVE 135 (267)
T ss_dssp HHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGG
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHh
Confidence 778888887 8999988754321 254445555799999999654443
No 405
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.48 E-value=0.15 Score=54.08 Aligned_cols=97 Identities=24% Similarity=0.207 Sum_probs=70.7
Q ss_pred HHHHhhcc-cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCC----CCC------cCCHHHHHHHHHhcCC
Q 020428 135 LTMLKRNL-DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADR----PRD------PAKWGEIADIVAALSI 203 (326)
Q Consensus 135 v~~v~~~~-~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~----~~~------~~~~~~i~~i~~~~~i 203 (326)
+..+++.. +.|+.+-+-.+.+.++..+.++.++++|+|+|.+|....... +.. ..-++.++.+++.+++
T Consensus 625 i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~ 704 (1025)
T 1gte_A 625 VTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQI 704 (1025)
T ss_dssp HHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCC
Confidence 45555544 678888886677888999999999999999999986533221 100 1124567788888899
Q ss_pred cEE--EeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 204 PVI--ANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 204 PVi--~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
||+ ...++.+..++.+.+++.|+|+|.+
T Consensus 705 Pv~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 705 PFFAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp CEEEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred ceEEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 998 4677777777666666899999998
No 406
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.45 E-value=0.18 Score=45.32 Aligned_cols=124 Identities=15% Similarity=0.206 Sum_probs=81.2
Q ss_pred HHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHH
Q 020428 89 RALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIE 167 (326)
Q Consensus 89 ~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~ 167 (326)
.+.+-++.+.+ |+|+|=+.+=-|.. --|.+.+.++++... +.+++.- |..+...+..+..+.+.
T Consensus 112 ~M~~dI~~~~~~GAdGvVfG~L~~dg-----------~iD~~~~~~Li~~a~---~l~vTFH-RAFD~~~d~~~Ale~Li 176 (287)
T 3iwp_A 112 VMKADIRLAKLYGADGLVFGALTEDG-----------HIDKELCMSLMAICR---PLPVTFH-RAFDMVHDPMAALETLL 176 (287)
T ss_dssp HHHHHHHHHHHTTCSEEEECCBCTTS-----------CBCHHHHHHHHHHHT---TSCEEEC-GGGGGCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeCCCC-----------CcCHHHHHHHHHHcC---CCcEEEE-CchhccCCHHHHHHHHH
Confidence 44455555555 99998874311322 136778888888764 3566653 22111124566677788
Q ss_pred HcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 168 KTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 168 ~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.|++.|..+|-. .+.....+.++++.+.. +++|++.|||+ .+.+.++++.+|++.+=..
T Consensus 177 ~lGvdrILTSG~~----~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~-~~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 177 TLGFERVLTSGCD----SSALEGLPLIKRLIEQAKGRIVVMPGGGIT-DRNLQRILEGSGATEFHCS 238 (287)
T ss_dssp HHTCSEEEECTTS----SSTTTTHHHHHHHHHHHTTSSEEEECTTCC-TTTHHHHHHHHCCSEEEEC
T ss_pred HcCCCEEECCCCC----CChHHhHHHHHHHHHHhCCCCEEEECCCcC-HHHHHHHHHhhCCCEEeEC
Confidence 8899999887752 22344678888877654 49999999996 5667788867999877553
No 407
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=95.39 E-value=0.034 Score=54.05 Aligned_cols=71 Identities=23% Similarity=0.330 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
.+..+.++.+.++|+|.|.++.... .....|+.++++++.+ ++||+. |++.|.+++..+. +.|+|+|.+|-
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G----~~~~~~e~i~~i~~~~p~~pvi~-g~~~t~e~a~~l~-~~G~d~I~v~~ 307 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG----HSRRVIETLEMIKADYPDLPVVA-GNVATPEGTEALI-KAGADAVKVGV 307 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC----SSHHHHHHHHHHHHHCTTSCEEE-EEECSHHHHHHHH-HTTCSEEEECS
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC----chHHHHHHHHHHHHHCCCceEEe-CCcCCHHHHHHHH-HcCCCEEEEcC
Confidence 3456788899999999999975311 1123578899999988 799877 7789999998888 69999999954
No 408
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=95.39 E-value=0.16 Score=47.34 Aligned_cols=96 Identities=13% Similarity=0.105 Sum_probs=70.5
Q ss_pred CChHHHHHHHHHHhhcccCcEEEEecCCCC---------------------------------hHHHHHHHHHHHHcCCc
Q 020428 126 SKPELIHDILTMLKRNLDVPVTCKIRLLKS---------------------------------SQDTVELARRIEKTGVS 172 (326)
Q Consensus 126 ~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~---------------------------------~~~~~e~a~~l~~~G~d 172 (326)
..++.+.+.++.+++.++.|+.|.+-.... .....+.++.+.+.|++
T Consensus 45 ~s~~~l~~~i~~~~~~~~~p~gVnl~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~ 124 (369)
T 3bw2_A 45 KTADGMYQEIKRLRGLTGRPFGVNVFMPQPELAESGAVEVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVP 124 (369)
T ss_dssp SCHHHHHHHHHHHHHHCCSCEEEEEECCCCCC---CHHHHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCS
T ss_pred CCHHHHHHHHHHHHHhCCCCeEEEEecCCCCcccHHHHHHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCC
Confidence 457888888899988777787776533111 01135667888899999
Q ss_pred EEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe-cc
Q 020428 173 ALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA-AR 233 (326)
Q Consensus 173 ~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi-Gr 233 (326)
.|.+|... ...+.++++++ .++||+. .+.|.+++..+. ..|+|+|.+ |+
T Consensus 125 ~V~~~~g~--------~~~~~i~~~~~-~g~~v~~--~v~t~~~a~~a~-~~GaD~i~v~g~ 174 (369)
T 3bw2_A 125 VVSFHFGV--------PDREVIARLRR-AGTLTLV--TATTPEEARAVE-AAGADAVIAQGV 174 (369)
T ss_dssp EEEEESSC--------CCHHHHHHHHH-TTCEEEE--EESSHHHHHHHH-HTTCSEEEEECT
T ss_pred EEEEeCCC--------CcHHHHHHHHH-CCCeEEE--ECCCHHHHHHHH-HcCCCEEEEeCC
Confidence 99998642 24678888876 4788776 578999998887 699999999 64
No 409
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=95.39 E-value=0.12 Score=47.52 Aligned_cols=90 Identities=22% Similarity=0.261 Sum_probs=70.1
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEE
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVI 206 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi 206 (326)
+++.+.+.++.+++.++.|+.|.+-.. + .+..+.++.+.+.|+|.|++|+.. | .+.++.+++ .++||+
T Consensus 61 ~~~~l~~~i~~i~~~~~~p~gVnl~~~-~-~~~~~~~~~~~~~g~d~V~l~~g~-------p--~~~~~~l~~-~g~~v~ 128 (326)
T 3bo9_A 61 KPDDLRKAISELRQKTDKPFGVNIILV-S-PWADDLVKVCIEEKVPVVTFGAGN-------P--TKYIRELKE-NGTKVI 128 (326)
T ss_dssp CHHHHHHHHHHHHTTCSSCEEEEEETT-S-TTHHHHHHHHHHTTCSEEEEESSC-------C--HHHHHHHHH-TTCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEEecc-C-CCHHHHHHHHHHCCCCEEEECCCC-------c--HHHHHHHHH-cCCcEE
Confidence 688899999999988888998887541 1 234677788889999999998742 2 456667665 478887
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
. ++.+.+++..+. ..|+|+|.+
T Consensus 129 ~--~v~s~~~a~~a~-~~GaD~i~v 150 (326)
T 3bo9_A 129 P--VVASDSLARMVE-RAGADAVIA 150 (326)
T ss_dssp E--EESSHHHHHHHH-HTTCSCEEE
T ss_pred E--EcCCHHHHHHHH-HcCCCEEEE
Confidence 5 688999999888 689999998
No 410
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=95.38 E-value=0.12 Score=49.33 Aligned_cols=98 Identities=14% Similarity=0.137 Sum_probs=70.3
Q ss_pred ChHHHHHHHHHHhhc---c--cCcEEEEe-----------c---CCCChHHHHHHHHH-HHHcCCcEEEEeecccCCCCC
Q 020428 127 KPELIHDILTMLKRN---L--DVPVTCKI-----------R---LLKSSQDTVELARR-IEKTGVSALAVHGRKVADRPR 186 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~---~--~~pv~vK~-----------r---~g~~~~~~~e~a~~-l~~~G~d~i~vh~r~~~~~~~ 186 (326)
+.+.+.-++++++++ + ++.+.+-. . .+|+.++.+++++. ++++++.+| + .+.
T Consensus 217 ~~e~l~~i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~i~~I-------E-dPl 288 (428)
T 3tqp_A 217 NEAAFELILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYPVISI-------E-DGL 288 (428)
T ss_dssp HHHHHHHHHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSCEEEE-------E-CCS
T ss_pred HHHHHHHHHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcccceE-------e-CCC
Confidence 444555668899988 6 45555544 1 25788899999997 898987665 1 223
Q ss_pred CcCCHHHHHHHHHhcCCcEEEeCC---CCCHHHHHHHHHhcCCcEEEec
Q 020428 187 DPAKWGEIADIVAALSIPVIANGD---VFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 187 ~~~~~~~i~~i~~~~~iPVi~nGg---I~s~~d~~~~l~~~Gad~VmiG 232 (326)
.+-||+..+++.+.++.||-..|+ ++++.++.++++...+|.+++=
T Consensus 289 ~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iK 337 (428)
T 3tqp_A 289 SENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVK 337 (428)
T ss_dssp CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC
T ss_pred CcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEec
Confidence 456899999999998867644455 4499999999976667888764
No 411
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=95.37 E-value=0.044 Score=49.58 Aligned_cols=83 Identities=22% Similarity=0.201 Sum_probs=60.0
Q ss_pred ccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeec-c----cCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHH
Q 020428 142 LDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGR-K----VADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDD 216 (326)
Q Consensus 142 ~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r-~----~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d 216 (326)
...|+.+-++. .++++.+.++|++.|++-.. . ..+......+.+.++++++.+++|++.+.++.+.++
T Consensus 20 ~~~~~i~~~~~-------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~~~~~Pvi~~~~~~~~~~ 92 (297)
T 2zbt_A 20 FKGGVIMDVTT-------PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMAAVSIPVMAKVRIGHFVE 92 (297)
T ss_dssp GTTEEEEEESS-------HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHH
T ss_pred hhCCeeeeech-------HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHHhcCCCeEEEeccCCHHH
Confidence 34566665542 78999999999999987210 0 011111234678899999999999999888888888
Q ss_pred HHHHHHhcCCcEEEecc
Q 020428 217 FQRIKTAAGASSVMAAR 233 (326)
Q Consensus 217 ~~~~l~~~Gad~VmiGr 233 (326)
++.++ ..|||+| .|.
T Consensus 93 ~~~~~-~aGad~v-~~~ 107 (297)
T 2zbt_A 93 AMILE-AIGVDFI-DES 107 (297)
T ss_dssp HHHHH-HTTCSEE-EEE
T ss_pred HHHHH-HCCCCEE-eee
Confidence 88888 6999999 443
No 412
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=95.35 E-value=0.055 Score=52.13 Aligned_cols=97 Identities=11% Similarity=0.131 Sum_probs=77.0
Q ss_pred hHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCc
Q 020428 128 PELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIP 204 (326)
Q Consensus 128 p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iP 204 (326)
++.-.+.++++|+++ ++++.+-..-+|+..+++++++.+++.++.+|- + +..+-|++.++++++.+ .+|
T Consensus 199 ~~~di~rv~avRea~G~d~~L~vDaN~~wt~~~Ai~~~~~Le~~~l~~iE-------E-Pl~~dd~~~la~L~~~~~~iP 270 (455)
T 3fxg_A 199 LRKNVEFLRKHREAVGPDFPIMVDCYMSLNVSYTIELVKACLDLNINWWE-------E-CLSPDDTDGFALIKRAHPTVK 270 (455)
T ss_dssp HHHHHHHHHHHHHHHCSSSCEEEECTTCCCHHHHHHHHHHTGGGCCSEEE-------C-CSCGGGGGGHHHHHHHCTTSE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHhcccCCcceec-------C-CCCcchHHHHHHHHHhCCCCe
Confidence 455667788888887 578888888889999999999999999998762 2 22345788889999887 478
Q ss_pred EEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 205 VIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 205 Vi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
|.+.=.+.|..++.++++...+|.+++=
T Consensus 271 IA~gEs~~s~~d~~~li~~~avDiiq~d 298 (455)
T 3fxg_A 271 FTTGEHEYSRYGFRKLVEGRNLDIIQPD 298 (455)
T ss_dssp EEECTTCCHHHHHHHHHTTCCCSEECCC
T ss_pred EECCCccCCHHHHHHHHHcCCCCEEEEC
Confidence 8877789999999999965567887663
No 413
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=95.28 E-value=0.091 Score=47.40 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=73.1
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCC------cEEEEeecccCCCCCC-cCCHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGV------SALAVHGRKVADRPRD-PAKWG 192 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~------d~i~vh~r~~~~~~~~-~~~~~ 192 (326)
.|+..+.+.+++. ++. .++.||.+|....-+.++....++.+.+.|. +-|++--|+..-.|.. ..|+.
T Consensus 113 IgA~~~~n~~LLr----~~a-~~gkPVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~erg~~y~~~~~~vdl~ 187 (288)
T 3tml_A 113 TPAFLCRQTDFIH----ACA-RSGKPVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMACERGVSFGYNNLVSDMR 187 (288)
T ss_dssp ECGGGTTCHHHHH----HHH-TSSSCEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEEECCEECSSSCEECCHH
T ss_pred ECcccccCHHHHH----HHH-ccCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEEeCCCCCCCCcCcCCHH
Confidence 4577788888644 443 5699999999876567777888888888887 5555433433223322 25899
Q ss_pred HHHHHHHhcCCcEEEe---------------CCCCCH--HHHHHHHHhcCCcEEEeccch
Q 020428 193 EIADIVAALSIPVIAN---------------GDVFEY--DDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 193 ~i~~i~~~~~iPVi~n---------------GgI~s~--~d~~~~l~~~Gad~VmiGr~~ 235 (326)
.+..+++ .++||++. ||-+.. .-+.... ..||||++|=+=.
T Consensus 188 ~i~~lk~-~~~pV~~D~sHs~q~p~~~~~~s~G~r~~v~~~a~AAv-A~GadGl~iE~H~ 245 (288)
T 3tml_A 188 SLAIMRE-TNAPVVFDATHSVQLPGGQGTSSGGQREFVPVLARAAV-ATGVAGLFMETHP 245 (288)
T ss_dssp HHHHGGG-GSSCEEEEHHHHTCCCC--------CTTHHHHHHHHHH-HHCCSEEEEEEES
T ss_pred HHHHHHh-cCCcEEEcCCcccccCCcccCCCCCchhhHHHHHHHHH-HcCCCEEEEeecc
Confidence 9999988 89999882 443332 2345556 5899999987643
No 414
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=95.27 E-value=0.071 Score=48.48 Aligned_cols=77 Identities=22% Similarity=0.219 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCcEEEEeec----cc-CCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 158 DTVELARRIEKTGVSALAVHGR----KV-ADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r----~~-~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
++.++++.++++|+++|++... .+ ........+.+.++++++.+++||+++-.+...++++.++ ..|||+|. +
T Consensus 29 ~~~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~-a~GAd~V~-~ 106 (305)
T 2nv1_A 29 INAEQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNAVSIPVMAKARIGHIVEARVLE-AMGVDYID-E 106 (305)
T ss_dssp SSHHHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHHCSSCEEEEECTTCHHHHHHHH-HHTCSEEE-E
T ss_pred CHHHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHhCCCCEEecccccchHHHHHHH-HCCCCEEE-E
Confidence 4568899999999999965421 11 1111123468899999999999998643333377777777 59999996 6
Q ss_pred cchh
Q 020428 233 RGAL 236 (326)
Q Consensus 233 r~~l 236 (326)
...+
T Consensus 107 ~~~l 110 (305)
T 2nv1_A 107 SEVL 110 (305)
T ss_dssp CTTS
T ss_pred eccC
Confidence 6555
No 415
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=95.25 E-value=0.22 Score=44.67 Aligned_cols=134 Identities=16% Similarity=0.203 Sum_probs=84.0
Q ss_pred HHHhhc-CCCEEEEcc-CCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC--ChHHHHHHHHHHHHc
Q 020428 94 AKMVCK-DVAAIDINM-GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK--SSQDTVELARRIEKT 169 (326)
Q Consensus 94 a~~~~~-~~d~idlN~-gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~--~~~~~~e~a~~l~~~ 169 (326)
|+++.+ |++.|=+.- +.- . ..|+-....-..+.+...++.|...++.||++-+-.|+ ++.+..+.++.+.++
T Consensus 29 A~~~~~aG~~ai~vsg~s~a--~--~~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~~v~~l~~a 104 (275)
T 2ze3_A 29 ARLLEAAGFTAIGTTSAGIA--H--ARGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRRTVEHFAAL 104 (275)
T ss_dssp HHHHHHHTCSCEEECHHHHH--H--HSCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEECcHHHH--H--hCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHHHHHHHHHc
Confidence 334444 888887752 111 1 12333333456677888888998888999999999974 577899999999999
Q ss_pred CCcEEEEeecccCCCCCCcCCH----HHHHHHHHh---cCCcEEEeCCCCC--------H-HHHHHHH------HhcCCc
Q 020428 170 GVSALAVHGRKVADRPRDPAKW----GEIADIVAA---LSIPVIANGDVFE--------Y-DDFQRIK------TAAGAS 227 (326)
Q Consensus 170 G~d~i~vh~r~~~~~~~~~~~~----~~i~~i~~~---~~iPVi~nGgI~s--------~-~d~~~~l------~~~Gad 227 (326)
|+++|++-+...... +.-.+. +.|+.+++. .++|+..+|-... . +.+.+++ ++.|||
T Consensus 105 Gaagv~iED~~~~~~-k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda~~~~~g~~~~~~~~~ai~Ra~ay~eAGAd 183 (275)
T 2ze3_A 105 GVAGVNLEDATGLTP-TELYDLDSQLRRIEAARAAIDASGVPVFLNARTDTFLKGHGATDEERLAETVRRGQAYADAGAD 183 (275)
T ss_dssp TCSEEEEECBCSSSS-SCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCTTTTTCSSSHHHHHHHHHHHHHHHHHTTCS
T ss_pred CCcEEEECCCcCCCC-CccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechhhhccccccchhhHHHHHHHHHHHHHCCCC
Confidence 999999987653211 111222 234444443 2678776664433 1 2233332 357999
Q ss_pred EEEec
Q 020428 228 SVMAA 232 (326)
Q Consensus 228 ~VmiG 232 (326)
++.+=
T Consensus 184 ~i~~e 188 (275)
T 2ze3_A 184 GIFVP 188 (275)
T ss_dssp EEECT
T ss_pred EEEEC
Confidence 99873
No 416
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=95.22 E-value=0.033 Score=54.35 Aligned_cols=72 Identities=18% Similarity=0.249 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEeccc
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAARG 234 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr~ 234 (326)
.+..+.++.|.++|+|.|+|..-. +. + ..-.+.++.|++.. ++||| .|+|.|++.++.++ ..|||+|-||-|
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ah--Gh-s-~~v~~~i~~ik~~~p~~~vi-aGNVaT~e~a~~Li-~aGAD~vkVGiG 352 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQ--GN-S-VYQIEFIKWIKQTYPKIDVI-AGNVVTREQAAQLI-AAGADGLRIGMG 352 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSC--CC-S-HHHHHHHHHHHHHCTTSEEE-EEEECSHHHHHHHH-HHTCSEEEECSS
T ss_pred ccHHHHHHHHHhcCCcEEEEeccc--cc-c-HHHHHHHHHHHhhCCcceEE-eccccCHHHHHHHH-HcCCCEEeecCC
Confidence 467888999999999999985321 11 1 11367888888876 56655 58999999999999 699999999865
No 417
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=95.20 E-value=0.12 Score=46.37 Aligned_cols=107 Identities=17% Similarity=0.125 Sum_probs=69.3
Q ss_pred HHHHHHHHHhhcccCcEEEEecCC-CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCc-------------C----CH
Q 020428 130 LIHDILTMLKRNLDVPVTCKIRLL-KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDP-------------A----KW 191 (326)
Q Consensus 130 ~~~~iv~~v~~~~~~pv~vK~r~g-~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~-------------~----~~ 191 (326)
.+.+..+.+++.-...+..=+-.| ++.+.+.++++.++++|+|.|.+--=-.+....|| . -+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 355666666655344455555556 67889999999999999999998522222111121 1 15
Q ss_pred HHHHHHHHh-cCCcEEEeCCCC-----CHHHHHHHHHhcCCcEEEeccchh
Q 020428 192 GEIADIVAA-LSIPVIANGDVF-----EYDDFQRIKTAAGASSVMAARGAL 236 (326)
Q Consensus 192 ~~i~~i~~~-~~iPVi~nGgI~-----s~~d~~~~l~~~Gad~VmiGr~~l 236 (326)
+.++++++. +++||+.-|-.. ..+...+...+.|+|||.+.---+
T Consensus 86 ~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ 136 (271)
T 3nav_A 86 ELIAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPT 136 (271)
T ss_dssp HHHHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCG
T ss_pred HHHHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCH
Confidence 678888887 799998876322 234444444579999999964433
No 418
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=95.20 E-value=0.088 Score=50.31 Aligned_cols=72 Identities=14% Similarity=0.163 Sum_probs=57.6
Q ss_pred CCCChHHHHHHHHHHHH-cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeC-CCCCHHHHHHHHHhcCCc
Q 020428 152 LLKSSQDTVELARRIEK-TGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANG-DVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 152 ~g~~~~~~~e~a~~l~~-~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nG-gI~s~~d~~~~l~~~Gad 227 (326)
.+|+.++.+++++.+++ +++.+| + .+..+-||+..+++++.+ ++||.+.= -++++.++.++++...+|
T Consensus 265 ~~~t~~~ai~~~~~L~~~~~i~~i-------E-ePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d 336 (431)
T 2fym_A 265 KAFTSEEFTHFLEELTKQYPIVSI-------E-DGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIAN 336 (431)
T ss_dssp EEECHHHHHHHHHHHHHHSCEEEE-------E-SCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCS
T ss_pred CCCCHHHHHHHHHHHHHhCCceEE-------E-CCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCC
Confidence 44788899999999988 876554 1 223456899999999998 89988766 689999999999766689
Q ss_pred EEEe
Q 020428 228 SVMA 231 (326)
Q Consensus 228 ~Vmi 231 (326)
.|++
T Consensus 337 ~i~i 340 (431)
T 2fym_A 337 SILI 340 (431)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8887
No 419
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=95.20 E-value=0.14 Score=48.29 Aligned_cols=88 Identities=19% Similarity=0.294 Sum_probs=61.5
Q ss_pred cCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccC------------------------------C-------CC
Q 020428 143 DVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVA------------------------------D-------RP 185 (326)
Q Consensus 143 ~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~------------------------------~-------~~ 185 (326)
+.|+.+.+=...+.+...++++.++++|++.|.+.--+.. + ..
T Consensus 146 ~~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~ 225 (392)
T 2nzl_A 146 EALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDS 225 (392)
T ss_dssp TSEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------
T ss_pred CCcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcc
Confidence 4677777643346667788888888889888877421100 0 00
Q ss_pred ----------CCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 186 ----------RDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 186 ----------~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
.....|+.++.+++.+++||+.- |+.+++++..+. +.|+|+|.++
T Consensus 226 ~~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivK-gv~~~e~A~~a~-~aGad~I~vs 280 (392)
T 2nzl_A 226 GLAAYVAKAIDPSISWEDIKWLRRLTSLPIVAK-GILRGDDAREAV-KHGLNGILVS 280 (392)
T ss_dssp CHHHHHHHHBCTTCCHHHHHHHC--CCSCEEEE-EECCHHHHHHHH-HTTCCEEEEC
T ss_pred hHHHHHhhcCChHHHHHHHHHHHHhhCCCEEEE-ecCCHHHHHHHH-HcCCCEEEeC
Confidence 11247899999999999999876 468999999988 6999999994
No 420
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=95.17 E-value=0.033 Score=52.79 Aligned_cols=69 Identities=19% Similarity=0.271 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+..+.++.+.++|+|.|.++... .+ ....|+.++.+++.+ ++||++ |++.+.++++.+. +.|+|+|.+|
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~---g~-~~~~~e~i~~ir~~~~~~pviv-~~v~~~~~a~~a~-~~Gad~I~vg 222 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH---GH-STRIIELIKKIKTKYPNLDLIA-GNIVTKEAALDLI-SVGADCLKVG 222 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC---CS-SHHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHH-TTTCSEEEEC
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC---CC-hHHHHHHHHHHHHHCCCCeEEE-cCCCcHHHHHHHH-hcCCCEEEEC
Confidence 35667788889999999985321 11 123478889999988 899987 7788999999888 6999999994
No 421
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=95.16 E-value=0.26 Score=45.80 Aligned_cols=128 Identities=8% Similarity=0.019 Sum_probs=74.8
Q ss_pred CCCEEEEc-------cCCCccccccccccccccC-----C--hHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHH
Q 020428 100 DVAAIDIN-------MGCPKSFSVSGGMGAALLS-----K--PELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARR 165 (326)
Q Consensus 100 ~~d~idlN-------~gcP~~~~~~~~~G~~l~~-----~--p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~ 165 (326)
|+.+|++- -|.|.+...+-. .++++ + .+...+-++..++..+.||.+-+ .|.+.++..+.++.
T Consensus 71 G~G~v~~ktvt~~pq~GNp~PR~~~~~--~~~iN~~G~~n~G~~~~~~~l~~~~~~~~~pvivsI-~G~~~~d~~~~a~~ 147 (354)
T 4ef8_A 71 ASGSLVSKSCTPALREGNPTPRYQALP--LGSINSMGLPNNGFDFYLAYAAEQHDYGKKPLFLSM-SGLSMRENVEMCKR 147 (354)
T ss_dssp SCSCEEEEEECSSCBCCSCSCCEEEET--TEEEECCCCCBCCHHHHHHHHHHTCCTTTCCEEEEE-CCSSHHHHHHHHHH
T ss_pred CCCeEEeCcccCcccCCCCCCcEEecc--hhhhccCCCCCcCHHHHHHHHHHHhhcCCCcEEEEe-ccCCHHHHHHHHHH
Confidence 77777774 355555443322 22333 2 23333333333333478888876 36778899999999
Q ss_pred HH---HcCCcEEEEeecccCC--CCCCcCC----HHHHHHHHHhcCCcEEE--eCCCCCHHHHHHH---HHhcC-CcEEE
Q 020428 166 IE---KTGVSALAVHGRKVAD--RPRDPAK----WGEIADIVAALSIPVIA--NGDVFEYDDFQRI---KTAAG-ASSVM 230 (326)
Q Consensus 166 l~---~~G~d~i~vh~r~~~~--~~~~~~~----~~~i~~i~~~~~iPVi~--nGgI~s~~d~~~~---l~~~G-ad~Vm 230 (326)
++ +.|+|+|.+.-..... ...-..+ .++++.+++.+++||+. .-++ +.+++.++ +++.| +|+|.
T Consensus 148 l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~-d~~~~~~~a~~~~~~Gg~d~I~ 226 (354)
T 4ef8_A 148 LAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYF-DFAHFDAAAEILNEFPKVQFIT 226 (354)
T ss_dssp HHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCC-SHHHHHHHHHHHHTCTTEEEEE
T ss_pred HhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCCC-CHHHHHHHHHHHHhCCCccEEE
Confidence 98 6799999986442211 1000113 34566677778899873 3333 45555444 44677 99997
Q ss_pred e
Q 020428 231 A 231 (326)
Q Consensus 231 i 231 (326)
+
T Consensus 227 ~ 227 (354)
T 4ef8_A 227 C 227 (354)
T ss_dssp E
T ss_pred E
Confidence 5
No 422
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=95.16 E-value=0.25 Score=43.41 Aligned_cols=133 Identities=10% Similarity=0.082 Sum_probs=77.3
Q ss_pred CcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhccc--Cc-E-EEE
Q 020428 76 NHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLD--VP-V-TCK 149 (326)
Q Consensus 76 ~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~--~p-v-~vK 149 (326)
.++++-+ .+..|+....+++.+.+ |+|.|.+|.-. | ++.+...++.+++. + .| + .+.
T Consensus 66 ~~v~lD~kl~Dip~t~~~~i~~~~~~Gad~vTvH~~~----------g------~~~l~~~~~~~~~~-G~~~~~~l~v~ 128 (245)
T 1eix_A 66 FDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG----------G------ARMMTAAREALVPF-GKDAPLLIAVT 128 (245)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGG----------C------HHHHHHHHHTTGGG-GGGCCEEEEEC
T ss_pred CcEEEEeeccccHHHHHHHHHHHHhCCCCEEEEeccC----------C------HHHHHHHHHHHHHc-CCCCCcEEEEE
Confidence 3555554 34667776666666666 99999998521 1 22344555555442 2 23 1 222
Q ss_pred ecCCCC------------h-HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHH
Q 020428 150 IRLLKS------------S-QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYD 215 (326)
Q Consensus 150 ~r~g~~------------~-~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~ 215 (326)
.....+ . +....++....+.|.+.++... ++ ++++++.. +.+++..|||+...
T Consensus 129 ~~ts~~~~~l~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~------------~e-i~~lr~~~~~~~i~v~gGI~~~g 195 (245)
T 1eix_A 129 VLTSMEASDLVDLGMTLSPADYAERLAALTQKCGLDGVVCSA------------QE-AVRFKQVFGQEFKLVTPGIRPQG 195 (245)
T ss_dssp SCTTCCHHHHHTTTCCSCHHHHHHHHHHHHHHTTCSEEECCG------------GG-HHHHHHHHCSSSEEEECCBCCTT
T ss_pred ecCCCCHHHHHHhccCCCHHHHHHHHHHHHHHcCCCeEEeCH------------HH-HHHHHHhcCCCCEEEECCcCCCC
Confidence 211111 1 1122233334567888765432 24 56666655 46899999998421
Q ss_pred ----------HHHHHHHhcCCcEEEeccchhcCc
Q 020428 216 ----------DFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 216 ----------d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
.+.+++ +.|+|.+.+||+++..+
T Consensus 196 ~~~~dq~rv~t~~~a~-~aGad~iVvGr~I~~a~ 228 (245)
T 1eix_A 196 SEAGDQRRIMTPEQAL-SAGVDYMVIGRPVTQSV 228 (245)
T ss_dssp CCCTTCCSCBCHHHHH-HTTCSEEEECHHHHTSS
T ss_pred CCccchhccCCHHHHH-HcCCCEEEECHHHcCCC
Confidence 466677 68999999999988654
No 423
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=95.15 E-value=0.095 Score=45.45 Aligned_cols=133 Identities=13% Similarity=0.132 Sum_probs=80.7
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEcc--CCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINM--GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~--gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
.++..|...|...+.+.++.+.+ |+|.+.+-. |.-.++ + ..-.++++++++.++.|+.+-+-.
T Consensus 8 ~i~psi~a~d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~---------~----~~~~~~~~~lr~~~~~~~~v~lmv- 73 (228)
T 1h1y_A 8 KIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPN---------L----TIGAPVIQSLRKHTKAYLDCHLMV- 73 (228)
T ss_dssp EEEEBGGGSCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC---------B----CBCHHHHHHHHTTCCSEEEEEEES-
T ss_pred eEEEEeeeCCHHHHHHHHHHHHHcCCCEEEEEEecCCcCcc---------h----hhCHHHHHHHHhhcCCcEEEEEEe-
Confidence 46778888888888888888766 889765542 211111 0 111256777777766677655543
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCC-HHHHHHHHHhcCCcEEEeCCCCCH-HHHHHHHHhc--CCcEE
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAK-WGEIADIVAALSIPVIANGDVFEY-DDFQRIKTAA--GASSV 229 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~-~~~i~~i~~~~~iPVi~nGgI~s~-~d~~~~l~~~--Gad~V 229 (326)
.++ .++++.+.++|+|.|++|+-... .. .+.++++++. ++.++..=.-.|+ +.++.++ .. ++|.|
T Consensus 74 ~d~---~~~i~~~~~agad~v~vH~~~~~------~~~~~~~~~i~~~-g~~igv~~~p~t~~e~~~~~~-~~~~~~d~v 142 (228)
T 1h1y_A 74 TNP---SDYVEPLAKAGASGFTFHIEVSR------DNWQELIQSIKAK-GMRPGVSLRPGTPVEEVFPLV-EAENPVELV 142 (228)
T ss_dssp SCG---GGGHHHHHHHTCSEEEEEGGGCT------TTHHHHHHHHHHT-TCEEEEEECTTSCGGGGHHHH-HSSSCCSEE
T ss_pred cCH---HHHHHHHHHcCCCEEEECCCCcc------cHHHHHHHHHHHc-CCCEEEEEeCCCCHHHHHHHH-hcCCCCCEE
Confidence 333 34566677799999999987432 12 3556666554 5655543333444 3444444 44 89999
Q ss_pred Eeccc
Q 020428 230 MAARG 234 (326)
Q Consensus 230 miGr~ 234 (326)
.+++-
T Consensus 143 l~~sv 147 (228)
T 1h1y_A 143 LVMTV 147 (228)
T ss_dssp EEESS
T ss_pred EEEee
Confidence 98643
No 424
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=95.12 E-value=0.68 Score=41.56 Aligned_cols=135 Identities=15% Similarity=0.138 Sum_probs=89.0
Q ss_pred EEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C--
Q 020428 78 VVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L-- 153 (326)
Q Consensus 78 ~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g-- 153 (326)
+.+-++..+.++...|. +.|+|-|||+.+-.. +.+--.+ .+++.+++.+++||-+=+|. |
T Consensus 40 ~~lEvc~~s~~~a~~A~---~gGAdRIELc~~l~~---------GGlTPS~----g~i~~a~~~~~ipV~vMIRPRgGdF 103 (287)
T 3iwp_A 40 FLMEVCVDSVESAVNAE---RGGADRIELCSGLSE---------GGTTPSM----GVLQVVKQSVQIPVFVMIRPRGGDF 103 (287)
T ss_dssp SEEEEEESSHHHHHHHH---HHTCSEEEECBCGGG---------TCBCCCH----HHHHHHHTTCCSCEEEECCSSSSCS
T ss_pred ceEEEEeCCHHHHHHHH---HhCCCEEEECCCCCC---------CCCCCCH----HHHHHHHHhcCCCeEEEEecCCCCc
Confidence 56677777766555432 248999999733111 1111112 34666677778999988887 3
Q ss_pred -CChH---HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCC---CCCHHHHHHHHHhcC
Q 020428 154 -KSSQ---DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGD---VFEYDDFQRIKTAAG 225 (326)
Q Consensus 154 -~~~~---~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGg---I~s~~d~~~~l~~~G 225 (326)
.+.. .-.+-++.+.++|+|+|+++.-+.+ +..|.+..+++.+.. .++|...=- +.++..+.+.+...|
T Consensus 104 ~Ys~~E~~~M~~dI~~~~~~GAdGvVfG~L~~d----g~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lG 179 (287)
T 3iwp_A 104 LYSDREIEVMKADIRLAKLYGADGLVFGALTED----GHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLG 179 (287)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTT----SCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHHHcCCCEEEEeeeCCC----CCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcC
Confidence 2333 3456678888999999999877655 456888888776653 578876654 345766666665679
Q ss_pred CcEEEec
Q 020428 226 ASSVMAA 232 (326)
Q Consensus 226 ad~VmiG 232 (326)
++.|.-+
T Consensus 180 vdrILTS 186 (287)
T 3iwp_A 180 FERVLTS 186 (287)
T ss_dssp CSEEEEC
T ss_pred CCEEECC
Confidence 9998774
No 425
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=95.12 E-value=0.22 Score=44.36 Aligned_cols=96 Identities=11% Similarity=0.118 Sum_probs=62.6
Q ss_pred CCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHH
Q 020428 85 SDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 85 ~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a 163 (326)
.+++...+.|+.+. +|+|.||||+|. .....++.+.+++..+.+.+++||++-.. + .+++
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~------------~~v~~~ee~~rvv~~i~~~~~~pisIDT~---~----~~v~ 82 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGP------------AVQDKVSAMEWLVEVTQEVSNLTLCLDST---N----IKAI 82 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC----------------CHHHHHHHHHHHHHTTCCSEEEEECS---C----HHHH
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCC------------CCCChHHHHHHHHHHHHHhCCCeEEEeCC---C----HHHH
Confidence 35666665555544 499999999753 23356788999999998877999999774 2 2445
Q ss_pred HHHHHc--CCcEEE-EeecccCCCCCCcCCHHHHHHHHHhcCCcEEE
Q 020428 164 RRIEKT--GVSALA-VHGRKVADRPRDPAKWGEIADIVAALSIPVIA 207 (326)
Q Consensus 164 ~~l~~~--G~d~i~-vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~ 207 (326)
+...++ |++.|. |++. ..+++.+..+....+.|+|+
T Consensus 83 ~aAl~a~~Ga~iINdvs~~--------~d~~~~~~~~~a~~~~~vvl 121 (262)
T 1f6y_A 83 EAGLKKCKNRAMINSTNAE--------REKVEKLFPLAVEHGAALIG 121 (262)
T ss_dssp HHHHHHCSSCEEEEEECSC--------HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhCCCCCEEEECCCC--------cccHHHHHHHHHHhCCcEEE
Confidence 555555 888875 5543 11243455566667889887
No 426
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=95.10 E-value=1.7 Score=38.51 Aligned_cols=135 Identities=13% Similarity=0.163 Sum_probs=82.0
Q ss_pred CCcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--c--CcEEE
Q 020428 75 RNHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--D--VPVTC 148 (326)
Q Consensus 75 ~~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~--~pv~v 148 (326)
+.+++.-+ ++.-|.....+++.+.+ |+|.+.+|... | ++.+...++...+.. + .|..+
T Consensus 56 g~~VflDlK~~DIpnTv~~a~~~~~~~gad~vTVh~~~----------G------~~~~~aa~~~~~~~~~~g~~~~~li 119 (259)
T 3tfx_A 56 GYKIFLDLKMHDIPNTVYNGAKALAKLGITFTTVHALG----------G------SQMIKSAKDGLIAGTPAGHSVPKLL 119 (259)
T ss_dssp TCEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGG----------C------HHHHHHHHHHHHHHSCTTSCCCEEE
T ss_pred CCcEEEEecccccchHHHHHHHHHHhcCCCEEEEcCCC----------C------HHHHHHHHHHHHHhcccCCCCceEE
Confidence 45677777 45557777777777777 99999998521 1 234444455543311 1 22111
Q ss_pred Ee-cC-CCC--------------hHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCC
Q 020428 149 KI-RL-LKS--------------SQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDV 211 (326)
Q Consensus 149 K~-r~-g~~--------------~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI 211 (326)
-+ -+ ..+ .+...++++...++|++++++.+. . ++.+++.+ +-.++..+||
T Consensus 120 ~Vt~lTS~~~~~l~~~~g~~~~~~e~v~~~A~~a~~~G~dGvV~s~~----------e---~~~ir~~~~~~f~~vtPGI 186 (259)
T 3tfx_A 120 AVTELTSISDDVLRNEQNCRLPMAEQVLSLAKMAKHSGADGVICSPL----------E---VKKLHENIGDDFLYVTPGI 186 (259)
T ss_dssp EECSCTTCCHHHHHHTSCBSSCHHHHHHHHHHHHHHTTCCEEECCGG----------G---HHHHHHHHCSSSEEEECCC
T ss_pred EEEEeCCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCEEEECHH----------H---HHHHHhhcCCccEEEcCCc
Confidence 11 11 111 134567888889999999987421 2 34555554 3446778888
Q ss_pred CCHH----H------HHHHHHhcCCcEEEeccchhcCc
Q 020428 212 FEYD----D------FQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 212 ~s~~----d------~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
+-.. | ..+++ ..|+|.+++||+++..+
T Consensus 187 r~~g~~~gDQ~Rv~T~~~a~-~aGad~iVvGr~I~~a~ 223 (259)
T 3tfx_A 187 RPAGNAKDDQSRVATPKMAK-EWGSSAIVVGRPITLAS 223 (259)
T ss_dssp CCC-----------CHHHHH-HTTCSEEEECHHHHTSS
T ss_pred CCCCCCcCCccccCCHHHHH-HcCCCEEEEChHHhCCC
Confidence 7431 1 55667 68999999999977643
No 427
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=95.10 E-value=0.15 Score=46.85 Aligned_cols=92 Identities=22% Similarity=0.240 Sum_probs=69.5
Q ss_pred ChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEE
Q 020428 127 KPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVI 206 (326)
Q Consensus 127 ~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi 206 (326)
+++.+.+.++.+++.++.|+.|.+-.. + .+..+.++.+.++|+|.|.+|+.. | .+.++.+++ .++||+
T Consensus 47 ~~~~~~~~i~~i~~~~~~p~gvnl~~~-~-~~~~~~~~~a~~~g~d~V~~~~g~-------p--~~~i~~l~~-~g~~v~ 114 (332)
T 2z6i_A 47 PKEVVKANIDKIKSLTDKPFGVNIMLL-S-PFVEDIVDLVIEEGVKVVTTGAGN-------P--SKYMERFHE-AGIIVI 114 (332)
T ss_dssp CHHHHHHHHHHHHHHCCSCEEEEECTT-S-TTHHHHHHHHHHTTCSEEEECSSC-------G--GGTHHHHHH-TTCEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCC-C-CCHHHHHHHHHHCCCCEEEECCCC-------h--HHHHHHHHH-cCCeEE
Confidence 577888889999887788988877541 1 134567888889999999999742 2 345666665 488888
Q ss_pred EeCCCCCHHHHHHHHHhcCCcEEEe-cc
Q 020428 207 ANGDVFEYDDFQRIKTAAGASSVMA-AR 233 (326)
Q Consensus 207 ~nGgI~s~~d~~~~l~~~Gad~Vmi-Gr 233 (326)
. .+.+.+++..+. +.|+|++.+ |+
T Consensus 115 ~--~v~~~~~a~~~~-~~GaD~i~v~g~ 139 (332)
T 2z6i_A 115 P--VVPSVALAKRME-KIGADAVIAEGM 139 (332)
T ss_dssp E--EESSHHHHHHHH-HTTCSCEEEECT
T ss_pred E--EeCCHHHHHHHH-HcCCCEEEEECC
Confidence 5 478999998877 689999999 54
No 428
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=95.07 E-value=0.48 Score=42.07 Aligned_cols=139 Identities=14% Similarity=0.170 Sum_probs=86.1
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccC-cEEEEecCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV-PVTCKIRLL 153 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~-pv~vK~r~g 153 (326)
.|++ -+...|.- .|+++.+ |+|.|=+ |-.... ..-|+-..+.-..+.+..-+++|+..++. +|.+-+.-|
T Consensus 17 ~~i~-~~tayD~~----sA~l~e~aG~d~ilv--Gdsl~~-~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pfg 88 (264)
T 1m3u_A 17 KRFA-TITAYDYS----FAKLFADEGLNVMLV--GDSLGM-TVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPFM 88 (264)
T ss_dssp CCEE-EEECCSHH----HHHHHHHHTCCEEEE--CTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCTT
T ss_pred CcEE-EEeCcCHH----HHHHHHHcCCCEEEE--CHHHHH-HHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCCC
Confidence 3443 45666633 3455555 9999866 322221 22344444455567777788888887765 456665542
Q ss_pred -C-ChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE-----------eCCC----CCHHH
Q 020428 154 -K-SSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA-----------NGDV----FEYDD 216 (326)
Q Consensus 154 -~-~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~-----------nGgI----~s~~d 216 (326)
. +++++.+-+..+.++|+++|.+-+.. ...+.|+.+.+ .+|||++ .||. +|.+.
T Consensus 89 sy~~~~~a~~~a~rl~kaGa~aVklEgg~--------e~~~~I~al~~-agipV~gHiGLtPq~v~~~ggf~v~grt~~~ 159 (264)
T 1m3u_A 89 AYATPEQAFENAATVMRAGANMVKIEGGE--------WLVETVQMLTE-RAVPVCGHLGLTPQSVNIFGGYKVQGRGDEA 159 (264)
T ss_dssp SSSSHHHHHHHHHHHHHTTCSEEECCCSG--------GGHHHHHHHHH-TTCCEEEEEESCGGGHHHHTSSCCCCCSHHH
T ss_pred CcCCHHHHHHHHHHHHHcCCCEEEECCcH--------HHHHHHHHHHH-CCCCeEeeecCCceeecccCCeEEEeCCHHH
Confidence 2 67788888889999999999987641 12455666654 3799983 3554 34443
Q ss_pred HHHHH------HhcCCcEEEe
Q 020428 217 FQRIK------TAAGASSVMA 231 (326)
Q Consensus 217 ~~~~l------~~~Gad~Vmi 231 (326)
+.+++ ++.||+++.+
T Consensus 160 a~~~i~rA~a~~eAGA~~ivl 180 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVL 180 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHCCCcEEEE
Confidence 44333 3579998876
No 429
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=95.06 E-value=0.6 Score=40.91 Aligned_cols=134 Identities=11% Similarity=0.102 Sum_probs=78.3
Q ss_pred CcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc--cc--Cc--EE
Q 020428 76 NHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN--LD--VP--VT 147 (326)
Q Consensus 76 ~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~--~~--~p--v~ 147 (326)
.++++-+ ++..|+....+++.+.+ |+|.|.+|.- .| ++.+...++.+++. .+ .| +.
T Consensus 56 ~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vTvH~~----------~g------~~~l~~~~~~~~~~~~~G~~~~~~la 119 (246)
T 2yyu_A 56 HAVFLDLKLHDIPNTVKQAMKGLARVGADLVNVHAA----------GG------RRMMEAAIEGLDAGTPSGRMRPRCIA 119 (246)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEGG----------GC------HHHHHHHHHHHHHHSCSSSCCCEEEE
T ss_pred CeEEEEeecccchHHHHHHHHHHHhcCCCEEEEECC----------CC------HHHHHHHHHHHHhhcccCCcCCCEEE
Confidence 3555554 34667776666666666 9999999852 11 23345666666652 23 34 32
Q ss_pred EEecCCCChHH--------------HHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeCCCC
Q 020428 148 CKIRLLKSSQD--------------TVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIANGDVF 212 (326)
Q Consensus 148 vK~r~g~~~~~--------------~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nGgI~ 212 (326)
+......+.++ ...++....+.|.+.++... ++ ++++++..+ .+++..|||+
T Consensus 120 v~~~Ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~V~~~------------~e-i~~lr~~~~~~~i~V~gGI~ 186 (246)
T 2yyu_A 120 VTQLTSTDERMLHEELWISRPLVETVAHYAALAKESGLDGVVCSA------------NE-AAFIKERCGASFLAVTPGIR 186 (246)
T ss_dssp ESSCTTCCHHHHHHTSCCCSCHHHHHHHHHHHHHHHTCCEEECCH------------HH-HHHHHHHHCTTSEEEECCCC
T ss_pred EEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCCEEEeCH------------HH-HHHHHHhcCCCCEEEeCCcC
Confidence 33222211111 12222223567888765432 34 666776553 5689999997
Q ss_pred CH-H---------HHHHHHHhcCCcEEEeccchhcCc
Q 020428 213 EY-D---------DFQRIKTAAGASSVMAARGALWNA 239 (326)
Q Consensus 213 s~-~---------d~~~~l~~~Gad~VmiGr~~l~~P 239 (326)
.. . .+.+++ +.|+|.+.+||+++..+
T Consensus 187 ~~g~~~~dq~rv~t~~~a~-~aGad~iVvGr~I~~a~ 222 (246)
T 2yyu_A 187 FADDAAHDQVRVVTPRKAR-ALGSDYIVIGRSLTRAA 222 (246)
T ss_dssp CCC-------CCCCHHHHH-HHTCSEEEECHHHHTSS
T ss_pred CCCCCcccccccCCHHHHH-HcCCCEEEECHhhcCCC
Confidence 42 1 356667 58999999999988643
No 430
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=95.01 E-value=0.29 Score=44.58 Aligned_cols=94 Identities=12% Similarity=0.133 Sum_probs=64.4
Q ss_pred HHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEE-EecCCCChHHHHHHHHHHHHcCCc-
Q 020428 95 KMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTC-KIRLLKSSQDTVELARRIEKTGVS- 172 (326)
Q Consensus 95 ~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~v-K~r~g~~~~~~~e~a~~l~~~G~d- 172 (326)
+++..|+|.||||+.+-.| .+.-..++...++++.+++.+++|+++ -+ .+++.-.++++...++|++
T Consensus 82 ~~v~~GAdiIDIg~~StrP--------~~~~vs~eee~~vV~~v~~~~~vplsI~DT---~~~~~~~~V~eaal~aga~~ 150 (310)
T 2h9a_B 82 KCVEYGADIVALRLVSAHP--------DGQNRSGAELAEVCKAVADAIDVPLMIIGC---GVEEKDAEIFPVIGEALSGR 150 (310)
T ss_dssp HHHHTTCSEEEEECGGGCT--------TTTCCCHHHHHHHHHHHHHHCSSCEEEECC---SCHHHHHHHHHHHHHHTTTS
T ss_pred HHHHcCCcEEEEeCccCCC--------CCCCCCHHHHHHHHHHHHHhCCceEEEECC---CCCCCCHHHHHHHHHhCCCC
Confidence 4454599999999863222 122345677777999999888999998 65 2344456778888888987
Q ss_pred --EEE-EeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeC
Q 020428 173 --ALA-VHGRKVADRPRDPAKWGEIADIVAALSIPVIANG 209 (326)
Q Consensus 173 --~i~-vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nG 209 (326)
.|. +++ . +++.+..+....+.||++.-
T Consensus 151 k~iINdvs~---------~-~~~~~~~~aa~~g~~vv~m~ 180 (310)
T 2h9a_B 151 NCLLSSATK---------D-NYKPIVATCMVHGHSVVASA 180 (310)
T ss_dssp CCEEEEECT---------T-THHHHHHHHHHHTCEEEEEC
T ss_pred CCEEEECCC---------C-ccHHHHHHHHHhCCCEEEEC
Confidence 332 322 1 45666667777899998765
No 431
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=95.00 E-value=0.11 Score=49.30 Aligned_cols=97 Identities=13% Similarity=0.146 Sum_probs=72.9
Q ss_pred HHHHHHHHhhcc--cCcEEEEecC------CCChHHHHHHHHHHHHcCCcE-EEEeecccCCCCC-C--cCCHHHHHHHH
Q 020428 131 IHDILTMLKRNL--DVPVTCKIRL------LKSSQDTVELARRIEKTGVSA-LAVHGRKVADRPR-D--PAKWGEIADIV 198 (326)
Q Consensus 131 ~~~iv~~v~~~~--~~pv~vK~r~------g~~~~~~~e~a~~l~~~G~d~-i~vh~r~~~~~~~-~--~~~~~~i~~i~ 198 (326)
..+.++++|+.+ ++.+.+-..- +|+.++++++++.+++.|+.. +.+ ++... + +.||+..++++
T Consensus 218 d~~~v~aiR~~~G~~~~L~vDan~~~~~~~~~~~~~A~~~~~~L~~~~~~~~l~i-----EqP~~~~~~~~d~~~~~~l~ 292 (413)
T 1kko_A 218 LSDRILSLRSSPRYHPTLHIDVYGTIGLIFDMDPVRCAEYIASLEKEAQGLPLYI-----EGPVDAGNKPDQIRMLTAIT 292 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHTGGGGTTSCEEE-----ECCCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCeEEEECCCccccccCCCHHHHHHHHHHHHhccCCcceEE-----ECCcCCCCCcccHHHHHHHH
Confidence 337889998887 4566666666 689999999999999976541 111 22211 1 45889999999
Q ss_pred Hh-----cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 199 AA-----LSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 199 ~~-----~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+. +++||.+.=.++|.+++.++++...+|.|++=
T Consensus 293 ~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik 331 (413)
T 1kko_A 293 KELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCHMVQIK 331 (413)
T ss_dssp HHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCSEEEEC
T ss_pred HhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCCEEEeC
Confidence 88 88999998889999999999976568888774
No 432
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=95.00 E-value=0.23 Score=43.09 Aligned_cols=80 Identities=25% Similarity=0.264 Sum_probs=62.7
Q ss_pred cEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhc
Q 020428 145 PVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAA 224 (326)
Q Consensus 145 pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~ 224 (326)
|+..=+|. .+.++..++++.+.+.|++.|.+.-++ +...+.++++++.++--+++.|-+.+.+++..++ ..
T Consensus 18 ~ii~vir~-~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~-~a 88 (224)
T 1vhc_A 18 KIVPVIAL-DNADDILPLADTLAKNGLSVAEITFRS-------EAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAK-SS 88 (224)
T ss_dssp CEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEETTS-------TTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHH-HH
T ss_pred CeEEEEeC-CCHHHHHHHHHHHHHcCCCEEEEeccC-------chHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHH-HC
Confidence 55555664 567789999999999999999886432 2346788888888754466777899999999999 69
Q ss_pred CCcEEEecc
Q 020428 225 GASSVMAAR 233 (326)
Q Consensus 225 Gad~VmiGr 233 (326)
|||+|..|.
T Consensus 89 GAd~v~~p~ 97 (224)
T 1vhc_A 89 GADFVVTPG 97 (224)
T ss_dssp TCSEEECSS
T ss_pred CCCEEEECC
Confidence 999999883
No 433
>1jpd_X L-Ala-D/L-Glu epimerase; enolase superfamily, muconate lactonizing enzyme subgroup, alpha/beta barrel, structural genomics, isomerase; 2.60A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1
Probab=94.97 E-value=0.061 Score=49.34 Aligned_cols=121 Identities=9% Similarity=0.160 Sum_probs=81.9
Q ss_pred EECCCCHHHHHHHHHHh-hcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHH
Q 020428 81 QMGTSDAVRALTAAKMV-CKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQD 158 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~-~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~ 158 (326)
.+.+.+++.+.+.++.. .+|+..+-+..|. + ...+.++++++.+ ++.+.+-..-+|+.++
T Consensus 127 ~~~~~~~e~~~~~a~~~~~~G~~~~KiKvg~----------------~--~d~~~v~avr~~~~~~~l~vDaN~~~~~~~ 188 (324)
T 1jpd_X 127 TVVIGTPDQMANSASTLWQAGAKLLKVKLDN----------------H--LISERMVAIRTAVPDATLIVDANESWRAEG 188 (324)
T ss_dssp EECSCCHHHHHHHHHHHHHTTCSEEEEECCS----------------S--CHHHHHHHHHHHCTTSEEEEECTTCCCSTT
T ss_pred EeeCCCHHHHHHHHHHHHHcCCCEEEEEeCC----------------c--hHHHHHHHHHHhCCCCEEEEECcCCCCHHH
Confidence 35556888887666654 4599999886551 1 1234567777765 4556666655788889
Q ss_pred HHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 159 TVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
+.++++.+++.++.+|- |. ..+.|++.+++++ .++||.+.=.+.+..++.++++ . +|.+++
T Consensus 189 a~~~~~~l~~~~i~~iE-------qP-~~~~d~~~~~~l~--~~ipIa~dE~~~~~~~~~~~~~-~-~~~i~i 249 (324)
T 1jpd_X 189 LAARCQLLADLGVAMLE-------QP-LPAQDDAALENFI--HPLPICADESCHTRSNLKALKG-R-YEMVNI 249 (324)
T ss_dssp HHHHHHHHHHTTCCEEE-------CC-SCTTSCGGGGSSC--CSSCEEESTTCSSGGGHHHHBT-T-BSEEEE
T ss_pred HHHHHHHHHhCCCCEEE-------CC-CCCCCHHHHHhcc--CCCCEEEcCCCCCHHHHHHHHh-h-CCEEEE
Confidence 99999999999988762 11 1223444444442 5899998888999999998884 2 565554
No 434
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=94.92 E-value=1.8 Score=38.12 Aligned_cols=140 Identities=13% Similarity=0.151 Sum_probs=92.4
Q ss_pred CcEEEEECCCCHHHHHHHHHHhh-cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecC-
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVC-KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRL- 152 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~-~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~- 152 (326)
+.+++-|.+.+.+++...++.+. .++|.||+=..+=.. ..+.+.+.+.+..+++.+ ++|+.+-+|.
T Consensus 20 p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~-----------~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~ 88 (257)
T 2yr1_A 20 PCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRA-----------IDDQERVLATANGLRNIAGEIPILFTIRSE 88 (257)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTT-----------TTCHHHHHHHHHHHHHHSSSCCEEEECCCT
T ss_pred cEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccc-----------cCcHHHHHHHHHHHHHhccCCCEEEEEeec
Confidence 35889999999998877676644 489999996532111 124678888999999887 8999998886
Q ss_pred ---C-C---ChHHHHHHHHHHHHcC-CcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCC----CCCHHHHHHH
Q 020428 153 ---L-K---SSQDTVELARRIEKTG-VSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGD----VFEYDDFQRI 220 (326)
Q Consensus 153 ---g-~---~~~~~~e~a~~l~~~G-~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGg----I~s~~d~~~~ 220 (326)
| + +.+...++.+.+.+.| +|+|.|--... . ....+.+.....+..||++=- --+.+++...
T Consensus 89 ~eGG~~~~~~~~~~~~ll~~~~~~g~~d~iDvEl~~~------~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~ 161 (257)
T 2yr1_A 89 REGGQPIPLNEAEVRRLIEAICRSGAIDLVDYELAYG------E-RIADVRRMTEECSVWLVVSRHYFDGTPRKETLLAD 161 (257)
T ss_dssp TTTCCCCSSCHHHHHHHHHHHHHHTCCSEEEEEGGGT------T-HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCCCEEEEECCCC------h-hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHH
Confidence 2 2 3466788888888888 99999965421 1 122222222345677887632 2333555444
Q ss_pred H---HhcCCcEEEecc
Q 020428 221 K---TAAGASSVMAAR 233 (326)
Q Consensus 221 l---~~~Gad~VmiGr 233 (326)
+ ...|||.|=++.
T Consensus 162 ~~~~~~~gaDivKia~ 177 (257)
T 2yr1_A 162 MRQAERYGADIAKVAV 177 (257)
T ss_dssp HHHHHHTTCSEEEEEE
T ss_pred HHHHHhcCCCEEEEEe
Confidence 3 257898776654
No 435
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=94.86 E-value=0.36 Score=44.89 Aligned_cols=82 Identities=9% Similarity=-0.006 Sum_probs=59.5
Q ss_pred CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc--cCcEEEEecCCCChHHHHH
Q 020428 85 SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL--DVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~--~~pv~vK~r~g~~~~~~~e 161 (326)
-|.+.+.+.++.+.+ |+++|=++.. .|-+..-..+.-.++++.+.+.+ .+||.+-+. ..+..++++
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GT----------TGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~ 145 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGT----------TGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG-SNSTREAIH 145 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESST----------TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeccc----------ccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHHH
Confidence 367788888887655 9999988642 33333334555566777766655 578887663 257889999
Q ss_pred HHHHHHHcCCcEEEEe
Q 020428 162 LARRIEKTGVSALAVH 177 (326)
Q Consensus 162 ~a~~l~~~G~d~i~vh 177 (326)
+++.++++|+|++.+.
T Consensus 146 la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 146 ATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHTTCSEEEEE
T ss_pred HHHHHHHcCCCEEEEc
Confidence 9999999999999875
No 436
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=94.86 E-value=0.57 Score=41.34 Aligned_cols=116 Identities=16% Similarity=0.163 Sum_probs=76.1
Q ss_pred cCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C---CChHH---HHHHHHHHHHcC
Q 020428 99 KDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L---KSSQD---TVELARRIEKTG 170 (326)
Q Consensus 99 ~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g---~~~~~---~~e~a~~l~~~G 170 (326)
.|+|-|||+.+=.. +.+--... +++.+++.+++||.|=+|. | ++..+ -.+-++.+.++|
T Consensus 20 ~GAdRIELc~~L~~---------GGlTPS~g----~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~G 86 (256)
T 1twd_A 20 NGADRVELCAAPKE---------GGLTPSLG----VLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELG 86 (256)
T ss_dssp TTCSEEEECBCGGG---------TCBCCCHH----HHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEcCCccc---------CCCCCCHH----HHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcC
Confidence 48999999743110 11111122 3455667778999999988 3 23333 455567888999
Q ss_pred CcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCC---CCCHHHHHHHHHhcCCcEEEe
Q 020428 171 VSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGD---VFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 171 ~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGg---I~s~~d~~~~l~~~Gad~Vmi 231 (326)
+|+|++-.-+.+ +..|.+.++++.+.. ++|+..-=- +.++..+.+.+...|++.|.-
T Consensus 87 adGvV~G~Lt~d----g~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILT 147 (256)
T 1twd_A 87 FPGLVTGVLDVD----GNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLT 147 (256)
T ss_dssp CSEEEECCBCTT----SSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEeeECCC----CCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEEC
Confidence 999988666554 567899988887654 677764322 356777666665789988863
No 437
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=94.85 E-value=0.8 Score=43.41 Aligned_cols=151 Identities=11% Similarity=0.059 Sum_probs=92.5
Q ss_pred CcEEEEE---CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc---ccCcEEE
Q 020428 76 NHVVFQM---GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN---LDVPVTC 148 (326)
Q Consensus 76 ~p~~vQl---~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~---~~~pv~v 148 (326)
.|+++-+ +|+ +....+.++.+.+ |+.+|.|.=....++.+....|..|. ..+...+-|++++.+ .+.++.+
T Consensus 153 lPviaD~DtGyG~-~~~v~~tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv-~~~e~~~rI~Aa~~A~~~~~~d~~I 230 (435)
T 3lg3_A 153 LPIVADAEAGFGG-VLNAFELMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLV-PTQEAIQKLVAARLAADVLGVPTLL 230 (435)
T ss_dssp CCEEEECTTCSSS-HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEEC-CHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCeEEECCCCCCC-cHHHHHHHHHHHHcCCEEEEEecCCCCccccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 6899988 344 4467777777766 99999997554334433333344444 455444445555443 2555555
Q ss_pred EecCC--------------------------------CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHH
Q 020428 149 KIRLL--------------------------------KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIAD 196 (326)
Q Consensus 149 K~r~g--------------------------------~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~ 196 (326)
--|.. ...+++++-++.+.+ |+|.|-++.. ..+.+.+++
T Consensus 231 iARTDa~aa~l~~s~~d~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~--------~~~~~ei~~ 301 (435)
T 3lg3_A 231 IARTDADAADLLTSDCDPYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETS--------TPDLALAKR 301 (435)
T ss_dssp EEEECTTTCCEESCCCCGGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCS--------SCCHHHHHH
T ss_pred EEEcCCccccccccccccccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCC--------CCCHHHHHH
Confidence 44542 235678888888888 9999999753 336777777
Q ss_pred HHHhcC--Cc--EE-EeCC-CCC------HHHHH---HHHHhcCCcEEEeccchhc
Q 020428 197 IVAALS--IP--VI-ANGD-VFE------YDDFQ---RIKTAAGASSVMAARGALW 237 (326)
Q Consensus 197 i~~~~~--iP--Vi-~nGg-I~s------~~d~~---~~l~~~Gad~VmiGr~~l~ 237 (326)
+.+.++ .| ++ +|.. .++ .+++. +-|...|...|.++-+.+.
T Consensus 302 f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa~lG~~~v~~~la~~r 357 (435)
T 3lg3_A 302 FADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELSAMGYKYQFITLAGIH 357 (435)
T ss_dssp HHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHHHTTEEEEEETTHHHH
T ss_pred HHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHHHcCCcEEEeCcHHHH
Confidence 776653 33 33 4432 233 33332 2344689999999877664
No 438
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=94.81 E-value=0.18 Score=45.71 Aligned_cols=89 Identities=12% Similarity=0.084 Sum_probs=61.1
Q ss_pred ccCcEEEEecCCCChHHHHHHHHHHHHcCCc---EEEEeecccCCCC-CC-cCC----HHHHHHHHHhcCCcEEE--eCC
Q 020428 142 LDVPVTCKIRLLKSSQDTVELARRIEKTGVS---ALAVHGRKVADRP-RD-PAK----WGEIADIVAALSIPVIA--NGD 210 (326)
Q Consensus 142 ~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d---~i~vh~r~~~~~~-~~-~~~----~~~i~~i~~~~~iPVi~--nGg 210 (326)
.+.|+.+-+. +.+.++..+.++.++++|+| +|.+|-....... .. ..+ ++.++.+++.+++||+. .++
T Consensus 92 ~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~ 170 (314)
T 2e6f_A 92 SKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY 170 (314)
T ss_dssp TTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC
T ss_pred CCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 3789988886 56788999999999999999 9999854222100 00 112 45677888888999874 455
Q ss_pred CCCHHHH---HHHHHhcC-CcEEEec
Q 020428 211 VFEYDDF---QRIKTAAG-ASSVMAA 232 (326)
Q Consensus 211 I~s~~d~---~~~l~~~G-ad~VmiG 232 (326)
+ +.+++ .+.+++.| +|++.+-
T Consensus 171 ~-~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 F-DIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp C-CHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred C-CHHHHHHHHHHHHhcCCceEEEEe
Confidence 4 66663 33345789 9999754
No 439
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=94.79 E-value=0.18 Score=48.37 Aligned_cols=71 Identities=14% Similarity=0.281 Sum_probs=56.3
Q ss_pred CChHHHHHHHHHHHH-cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCC-CCCHHHHHHHHHhcCCcEE
Q 020428 154 KSSQDTVELARRIEK-TGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGD-VFEYDDFQRIKTAAGASSV 229 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~-~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGg-I~s~~d~~~~l~~~Gad~V 229 (326)
|+.++++++++.+.+ +++.+| ++ +..+.||+..+++++.+ ++||++.-- ++++.++.++++...+|.|
T Consensus 279 ~t~~eai~~~~~l~~~~~i~~i-------Ee-Pl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i 350 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKYPIITI-------ED-GMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSI 350 (444)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE-------ES-CSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred CCHHHHHHHHHHHHHhCCcEEE-------EC-CCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEE
Confidence 678889999998864 876654 22 23456899999999998 899987776 8999999999976668988
Q ss_pred Eec
Q 020428 230 MAA 232 (326)
Q Consensus 230 miG 232 (326)
++=
T Consensus 351 ~ik 353 (444)
T 1w6t_A 351 LIK 353 (444)
T ss_dssp EEC
T ss_pred EEc
Confidence 774
No 440
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=94.79 E-value=0.097 Score=51.20 Aligned_cols=70 Identities=20% Similarity=0.274 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 158 DTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
+..+.++.+.++|+|.|.+..-.. ....-++.++++++.. ++||++ |+|.|.++++.+. +.|+|+|.+|-
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g----~~~~v~~~i~~i~~~~~~~~vi~-g~v~t~e~a~~~~-~aGad~i~vg~ 326 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHG----HSQGVIDKVKEVRAKYPSLNIIA-GNVATAEATKALI-EAGANVVKVGI 326 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HHTCSEEEECS
T ss_pred chHHHHHHHHhhccceEEeccccc----chhhhhhHHHHHHHhCCCceEEe-eeeccHHHHHHHH-HhCCCEEEECC
Confidence 457778899999999999974421 1122357888998886 477774 7899999999999 68999999854
No 441
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=94.74 E-value=0.56 Score=41.89 Aligned_cols=115 Identities=12% Similarity=0.108 Sum_probs=73.1
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccC-cEEEEecCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV-PVTCKIRLL 153 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~-pv~vK~r~g 153 (326)
.|++ -+...|.- .|+++.+ |+|.|=+ |--... ..-|+-..+.-..+.+...+++|+..++. +|.+-+.-|
T Consensus 17 ~~i~-~~tayDa~----sA~l~e~aG~d~ilv--GdSl~~-~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfg 88 (275)
T 1o66_A 17 EKIA-MLTAYESS----FAALMDDAGVEMLLV--GDSLGM-AVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFG 88 (275)
T ss_dssp CCEE-EEECCSHH----HHHHHHHTTCCEEEE--CTTHHH-HTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTT
T ss_pred CcEE-EEeCcCHH----HHHHHHHcCCCEEEE--CHHHHH-HHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCC
Confidence 3443 45666633 4455555 8998833 322221 22344444555677888888888888765 466666553
Q ss_pred ---CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE
Q 020428 154 ---KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA 207 (326)
Q Consensus 154 ---~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~ 207 (326)
.+++++.+-+..+.++|+++|.+-+.. .-.+.|+.+.+ .+|||++
T Consensus 89 sy~~s~~~a~~na~rl~kaGa~aVklEdg~--------e~~~~I~al~~-agIpV~g 136 (275)
T 1o66_A 89 AYQQSKEQAFAAAAELMAAGAHMVKLEGGV--------WMAETTEFLQM-RGIPVCA 136 (275)
T ss_dssp SSSSCHHHHHHHHHHHHHTTCSEEEEECSG--------GGHHHHHHHHH-TTCCEEE
T ss_pred CccCCHHHHHHHHHHHHHcCCcEEEECCcH--------HHHHHHHHHHH-cCCCeEe
Confidence 257888888889999999999997751 12455666654 3899983
No 442
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=94.73 E-value=0.96 Score=39.33 Aligned_cols=135 Identities=14% Similarity=0.175 Sum_probs=78.6
Q ss_pred CcEEEEE-CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc--ccC--c--EE
Q 020428 76 NHVVFQM-GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN--LDV--P--VT 147 (326)
Q Consensus 76 ~p~~vQl-~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~--~~~--p--v~ 147 (326)
.++++-+ ++..|+....+++.+.+ |+|.|.+|.- .| .+.+..+++.+++. .+. | +.
T Consensus 55 ~~v~lD~kl~Dip~t~~~~~~~~~~~Gad~vtvH~~----------~g------~~~l~~~~~~~~~~~~~g~~~~~~~~ 118 (239)
T 1dbt_A 55 CELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAA----------GG------KKMMQAALEGLEEGTPAGKKRPSLIA 118 (239)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGG----------GC------HHHHHHHHHHHHHHSCTTSCCCEEEE
T ss_pred CcEEEEeccccchHHHHHHHHHHHhcCCCEEEEeCc----------CC------HHHHHHHHHHHHhhhccCCCCccEEE
Confidence 3555554 34667777767766666 9999999852 11 22344555666543 132 3 44
Q ss_pred EEecCCCChHH--------------HHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCC
Q 020428 148 CKIRLLKSSQD--------------TVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVF 212 (326)
Q Consensus 148 vK~r~g~~~~~--------------~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~ 212 (326)
|-.....+.+. ...++....+.|.+.++... +-++++++.. +.+++..|||+
T Consensus 119 V~~~ts~~~~~l~~~~~~~~~~~d~Vl~ma~~~~~~G~~g~v~~~-------------~~i~~lr~~~~~~~i~v~gGI~ 185 (239)
T 1dbt_A 119 VTQLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCSV-------------HEAKAIYQAVSPSFLTVTPGIR 185 (239)
T ss_dssp ECSCTTCCHHHHHHTSCBCSCHHHHHHHHHHHHHHTTCSEEECCG-------------GGHHHHTTTSCTTCEEEECCBC
T ss_pred EEEcCCCCHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCEEEECH-------------HHHHHHHHhcCCCcEEEeCCcC
Confidence 43332221111 12222323667888765543 1244555554 36899999998
Q ss_pred CHHH----------HHHHHHhcCCcEEEeccchhcCcc
Q 020428 213 EYDD----------FQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 213 s~~d----------~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
.... ..+++ +.|+|.+.+||+++..+.
T Consensus 186 ~~~~~~~dq~rv~tp~~a~-~aGad~iVvGr~I~~a~d 222 (239)
T 1dbt_A 186 MSEDAANDQVRVATPAIAR-EKGSSAIVVGRSITKAED 222 (239)
T ss_dssp CTTSCCTTCSSCBCHHHHH-HTTCSEEEECHHHHTSSC
T ss_pred CCCCCccceeccCCHHHHH-HcCCCEEEEChhhcCCCC
Confidence 5332 25667 689999999999886543
No 443
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=94.71 E-value=0.17 Score=48.05 Aligned_cols=95 Identities=7% Similarity=0.062 Sum_probs=72.1
Q ss_pred HHHHHHHHhhcc--cCcEEEEecCC------CChHHHHHHHHHHHHc--CCc-EEEEeecccCCCCC---CcCCHHHHHH
Q 020428 131 IHDILTMLKRNL--DVPVTCKIRLL------KSSQDTVELARRIEKT--GVS-ALAVHGRKVADRPR---DPAKWGEIAD 196 (326)
Q Consensus 131 ~~~iv~~v~~~~--~~pv~vK~r~g------~~~~~~~e~a~~l~~~--G~d-~i~vh~r~~~~~~~---~~~~~~~i~~ 196 (326)
-.+.++++|+.+ ++.+.+-..-+ |+.++++++++.+++. ++. +| ++... .+.|++..++
T Consensus 218 d~~~v~avR~~~G~~~~l~vDaN~~~~~~~~~~~~~a~~~~~~L~~~~~~i~~~i-------EqP~~~~~~~~d~~~~~~ 290 (413)
T 1kcz_A 218 LRDRIIKLRVREDYAPIFHIDVYGTIGAAFDVDIKAMADYIQTLAEAAKPFHLRI-------EGPMDVEDRQKQMEAMRD 290 (413)
T ss_dssp HHHHHHHHCSSTTCCCEEEEECTTHHHHHTTTCHHHHHHHHHHHHHHHTTSCEEE-------ECSBCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCceEEEecCCCcccccCCCHHHHHHHHHHHHhhcCCcceEE-------ecCCCCCCCcccHHHHHH
Confidence 457788898877 35555665556 8999999999999998 665 43 11110 1237889999
Q ss_pred HHHh-----cCCcEEEeCCCCCHHHHHHHHHhcCCcEEEec
Q 020428 197 IVAA-----LSIPVIANGDVFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 197 i~~~-----~~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiG 232 (326)
+++. +++||.+.=.++|.+++.++++...+|.|++=
T Consensus 291 l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik 331 (413)
T 1kcz_A 291 LRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIK 331 (413)
T ss_dssp HHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEEC
T ss_pred HHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeC
Confidence 9988 78999988889999999999976668888775
No 444
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=94.70 E-value=0.3 Score=44.08 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=64.2
Q ss_pred ECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC-ChHHH
Q 020428 82 MGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK-SSQDT 159 (326)
Q Consensus 82 l~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~-~~~~~ 159 (326)
+...|+- .|+++.+ |++.|=+.-.+ ...+ .|+-....-..+.+...++.|...++.||++-+-.|+ ++.+.
T Consensus 20 ~~a~D~~----sA~~~~~aG~~ai~vs~~~-~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~~ 92 (290)
T 2hjp_A 20 MAAHNPL----VAKLAEQAGFGGIWGSGFE-LSAS--YAVPDANILSMSTHLEMMRAIASTVSIPLIADIDTGFGNAVNV 92 (290)
T ss_dssp EECSSHH----HHHHHHHHTCSEEEECHHH-HHHH--TTSCTTTCSCHHHHHHHHHHHHTTCSSCEEEECTTTTSSHHHH
T ss_pred ecCCCHH----HHHHHHHcCCCEEEEChHH-HHHh--CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCHHHH
Confidence 5556643 3344444 89988775210 0000 2333333456678888889999999999999998874 56788
Q ss_pred HHHHHHHHHcCCcEEEEeecc
Q 020428 160 VELARRIEKTGVSALAVHGRK 180 (326)
Q Consensus 160 ~e~a~~l~~~G~d~i~vh~r~ 180 (326)
.+.++.+.++|+++|++-+..
T Consensus 93 ~~~v~~l~~aGa~gv~iED~~ 113 (290)
T 2hjp_A 93 HYVVPQYEAAGASAIVMEDKT 113 (290)
T ss_dssp HHHHHHHHHHTCSEEEEECBC
T ss_pred HHHHHHHHHhCCeEEEEcCCC
Confidence 999999999999999998765
No 445
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=94.67 E-value=0.39 Score=43.52 Aligned_cols=149 Identities=17% Similarity=0.122 Sum_probs=85.9
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEcc-CCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINM-GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~-gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
.|++ =+...|+-. |+++.+ |++.|=+.- ++-. ...|+-....-..+.+...++.|...++.||++-+-.|
T Consensus 22 ~~i~-~~~a~D~~s----A~l~e~aGf~ai~vs~~s~a~---~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~G 93 (298)
T 3eoo_A 22 QPLQ-VVGAITAYA----AKMAEAVGFKAVYLSGGGVAA---NSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTG 93 (298)
T ss_dssp SSEE-EEECSSHHH----HHHHHHHTCSCEEECHHHHHH---HTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTC
T ss_pred CcEE-EecCCCHHH----HHHHHHcCCCEEEECcHHHHH---HhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCC
Confidence 3443 345566432 333444 888887642 1110 01122222234566777778888888899999999987
Q ss_pred C-ChHHHHHHHHHHHHcCCcEEEEeecccCCCC---CC--cCCH-HHHHHHHHh---c-CCcEEEeC--CCCCHHHHHHH
Q 020428 154 K-SSQDTVELARRIEKTGVSALAVHGRKVADRP---RD--PAKW-GEIADIVAA---L-SIPVIANG--DVFEYDDFQRI 220 (326)
Q Consensus 154 ~-~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~---~~--~~~~-~~i~~i~~~---~-~iPVi~nG--gI~s~~d~~~~ 220 (326)
+ ++.+..+.++.+.++|+.+|++-+.....+. .+ -.+. +.+.+|+.. - +.+++.++ +-...+.+.+.
T Consensus 94 yg~~~~v~~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldea 173 (298)
T 3eoo_A 94 WGGAFNIARTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAA 173 (298)
T ss_dssp SSSHHHHHHHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHH
Confidence 5 5678888899999999999999877542111 11 1222 345555432 1 34444444 33322222222
Q ss_pred H------HhcCCcEEEec
Q 020428 221 K------TAAGASSVMAA 232 (326)
Q Consensus 221 l------~~~Gad~VmiG 232 (326)
+ .+.|||++.+=
T Consensus 174 i~Ra~ay~~AGAD~if~~ 191 (298)
T 3eoo_A 174 IERAIAYVEAGADMIFPE 191 (298)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHhhHhcCCCEEEeC
Confidence 2 25899999883
No 446
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=94.62 E-value=0.088 Score=45.06 Aligned_cols=81 Identities=11% Similarity=0.012 Sum_probs=57.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCC--cCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRD--PAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~--~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
-|..+..+.++.+++.|+|++++--.. +.+.. ....+.++++++.++.|+..-+.|.++++..+.+...|+|+|.+
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~d--g~~~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~v 90 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMD--GQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMTI 90 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEB--SSSSSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeec--CCCCCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEEE
Confidence 345678888999999999998765322 21111 22378899999888899999899998864334444799999999
Q ss_pred ccchh
Q 020428 232 ARGAL 236 (326)
Q Consensus 232 Gr~~l 236 (326)
.-...
T Consensus 91 h~~~~ 95 (220)
T 2fli_A 91 HTEST 95 (220)
T ss_dssp EGGGC
T ss_pred ccCcc
Confidence 65443
No 447
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=94.60 E-value=0.15 Score=46.36 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=59.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCC-HHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAK-WGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~-~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-.... .+.++.+.+.+ ++|||+ .|+..+.+.++.. .++.|||
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 4567788999999999999999999887755433222 34455555544 589874 5665555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 114 avlv~~P~y~~~ 125 (304)
T 3cpr_A 114 GLLVVTPYYSKP 125 (304)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 448
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=94.58 E-value=0.18 Score=45.05 Aligned_cols=114 Identities=14% Similarity=0.151 Sum_probs=74.0
Q ss_pred ccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCC-cCCHHHHHHHH
Q 020428 120 MGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRD-PAKWGEIADIV 198 (326)
Q Consensus 120 ~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~-~~~~~~i~~i~ 198 (326)
.|+..+++.+++++ + ..++.||.+|....-+.++....+..+...|...+++.-|...-.|.. ..|+..+..++
T Consensus 100 IgA~~~rn~~ll~~----~-a~~~~PV~lK~G~~~t~~e~~~Av~~i~~~GN~~i~L~~rG~~~~y~~~~~dl~~i~~lk 174 (267)
T 2nwr_A 100 IPAFLCRQTDLLLA----A-AKTGRAVNVKKGQFLAPWDTKNVVEKLKFGGAKEIYLTERGTTFGYNNLVVDFRSLPIMK 174 (267)
T ss_dssp ECGGGTTCHHHHHH----H-HTTTSEEEEECCTTCCGGGGHHHHHHHHHTTCSSEEEEECCEECSSSCEECCTTHHHHHT
T ss_pred ECcccccCHHHHHH----H-HcCCCcEEEeCCCCCCHHHHHHHHHHHHHcCCCeEEEEECCCCCCCCccccCHHHHHHHH
Confidence 35677788875444 4 356999999998865677778888889999986666554533222211 25777888888
Q ss_pred HhcCCcEEEe---------------CCCCC--HHHHHHHHHhcCCcEEEeccchhcCccc
Q 020428 199 AALSIPVIAN---------------GDVFE--YDDFQRIKTAAGASSVMAARGALWNASI 241 (326)
Q Consensus 199 ~~~~iPVi~n---------------GgI~s--~~d~~~~l~~~Gad~VmiGr~~l~~P~l 241 (326)
+. + ||+.. +|-.. ..-+.... ..|++|+||=+-+--+..+
T Consensus 175 ~~-~-pVivD~sH~~q~p~G~s~hs~g~~~~~~~ia~aav-a~Ga~G~mIE~H~~pd~al 231 (267)
T 2nwr_A 175 QW-A-KVIYDATHSVQLPGGLGDKSGGMREFIFPLIRAAV-AVGCDGVFMETHPEPEKAL 231 (267)
T ss_dssp TT-S-EEEEETTGGGCCTTC------CCGGGHHHHHHHHH-HHCCSEEEEEEESCGGGCS
T ss_pred Hc-C-CEEEcCCcccccCCCcCcCCCCchhHHHHHHHHHH-HcCCCEEEEEecCCcccCC
Confidence 76 6 99873 33111 23344445 5899999998765434333
No 449
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=94.58 E-value=0.25 Score=42.53 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=64.2
Q ss_pred CcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHh
Q 020428 144 VPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTA 223 (326)
Q Consensus 144 ~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~ 223 (326)
.|+..=+|. .+.++..++++.+.+.|++.|.+.-++ +...+.++++++.++-.+++.|-+.+.+++..++ .
T Consensus 16 ~~~i~v~r~-~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~-~ 86 (214)
T 1wbh_A 16 GPVVPVIVV-KKLEHAVPMAKALVAGGVRVLNVTLRT-------ECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVT-E 86 (214)
T ss_dssp CSEEEEECC-SSGGGHHHHHHHHHHTTCCEEEEESCS-------TTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHH-H
T ss_pred CCEEEEEEC-CCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHH-H
Confidence 466666664 566788999999999999999887442 2346788888888765677888899999999999 6
Q ss_pred cCCcEEEec
Q 020428 224 AGASSVMAA 232 (326)
Q Consensus 224 ~Gad~VmiG 232 (326)
.|||+|..|
T Consensus 87 aGAd~v~~p 95 (214)
T 1wbh_A 87 AGAQFAISP 95 (214)
T ss_dssp HTCSCEEES
T ss_pred cCCCEEEcC
Confidence 999999988
No 450
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=94.54 E-value=0.92 Score=41.95 Aligned_cols=132 Identities=13% Similarity=0.147 Sum_probs=86.6
Q ss_pred eeecccCCCCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCc
Q 020428 67 VFRTCHQERNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVP 145 (326)
Q Consensus 67 ~~~~~~~~~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~p 145 (326)
+.+.+.+.+-+++--.|... . +..+.+ +++.+-|. |.=+.|..+++.+ . ..+.|
T Consensus 83 L~~~~~~~Gi~~~st~fD~~--s----vd~l~~~~v~~~KI~--------------S~~~~N~pLL~~v----a-~~gKP 137 (350)
T 3g8r_A 83 LVAEMKANGFKAICTPFDEE--S----VDLIEAHGIEIIKIA--------------SCSFTDWPLLERI----A-RSDKP 137 (350)
T ss_dssp HHHHHHHTTCEEEEEECSHH--H----HHHHHHTTCCEEEEC--------------SSSTTCHHHHHHH----H-TSCSC
T ss_pred HHHHHHHcCCcEEeccCCHH--H----HHHHHHcCCCEEEEC--------------cccccCHHHHHHH----H-hhCCc
Confidence 45566667767776665332 2 223334 57777763 4445666665544 3 35999
Q ss_pred EEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEe----CCCCCHHHHHHH
Q 020428 146 VTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIAN----GDVFEYDDFQRI 220 (326)
Q Consensus 146 v~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~n----GgI~s~~d~~~~ 220 (326)
|.+|.... +.++....++.+.+.|.+.+.+|+-+.-..+....|+..|..+++.. ++||..+ |+.. .-+...
T Consensus 138 viLstGms-tl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~--~~~~AA 214 (350)
T 3g8r_A 138 VVASTAGA-RREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLM--EPIMLA 214 (350)
T ss_dssp EEEECTTC-CHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSCC--HHHHHH
T ss_pred EEEECCCC-CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCCcc--HHHHHH
Confidence 99999875 77888888888888898877777654322223456888999999998 7999877 4432 223345
Q ss_pred HHhcCCc
Q 020428 221 KTAAGAS 227 (326)
Q Consensus 221 l~~~Gad 227 (326)
. ..||+
T Consensus 215 v-AlGA~ 220 (350)
T 3g8r_A 215 V-AQGAT 220 (350)
T ss_dssp H-HTTCC
T ss_pred H-HcCCC
Confidence 5 47886
No 451
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=94.54 E-value=0.53 Score=44.73 Aligned_cols=151 Identities=9% Similarity=0.010 Sum_probs=93.9
Q ss_pred CcEEEEE---CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEEE
Q 020428 76 NHVVFQM---GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVTC 148 (326)
Q Consensus 76 ~p~~vQl---~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~v 148 (326)
.|+++-+ +|+ +....+.++.+.+ |+.+|.|-=..+.++.+..-.|..|. ..+...+-|++++.+. +.++.+
T Consensus 153 ~PviaD~dtGfG~-~~~v~~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv-~~~e~v~rI~Aar~A~~~~g~d~~I 230 (439)
T 3i4e_A 153 APIVADAEAGFGG-VLNAFELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLV-PTREAVAKLTAARLAADVMGTPTVL 230 (439)
T ss_dssp CCEEEECTTTTSS-HHHHHHHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBC-CHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCeEEECCCCCCc-cHHHHHHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeec-CHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 6899988 344 4467777777666 99999997655444444333343444 4544444455555432 566655
Q ss_pred EecCC--------------------------------CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHH
Q 020428 149 KIRLL--------------------------------KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIAD 196 (326)
Q Consensus 149 K~r~g--------------------------------~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~ 196 (326)
--|.. ...+++++-++.+.+ |+|.|-++.. ..+.+.+++
T Consensus 231 iARTDa~~a~l~~s~~d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~--------~~~~eei~~ 301 (439)
T 3i4e_A 231 VARTDAEAADLITSDIDDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETG--------KPDLEYAKK 301 (439)
T ss_dssp EEEECTTTCCEESCCCCTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCS--------SCCHHHHHH
T ss_pred EEEcCcccccccccccccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCC--------CCCHHHHHH
Confidence 55542 125678888888888 9999998753 346777877
Q ss_pred HHHhcC----CcEE-EeCC-CCC------HHHHHH---HHHhcCCcEEEeccchhc
Q 020428 197 IVAALS----IPVI-ANGD-VFE------YDDFQR---IKTAAGASSVMAARGALW 237 (326)
Q Consensus 197 i~~~~~----iPVi-~nGg-I~s------~~d~~~---~l~~~Gad~VmiGr~~l~ 237 (326)
+.+.++ .+++ +|.. .++ .+++.. -|...|+..|.++-+.+.
T Consensus 302 f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~~lGv~~v~~~la~~r 357 (439)
T 3i4e_A 302 FAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFH 357 (439)
T ss_dssp HHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHHHHTCCEEEETTHHHH
T ss_pred HHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHHHcCCeEEEeChHHHH
Confidence 777653 4444 3332 233 333322 234689999999977664
No 452
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=94.52 E-value=0.071 Score=46.64 Aligned_cols=85 Identities=12% Similarity=0.113 Sum_probs=58.6
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCc-------------CC----HHHHHHHHHhcCCcEEEeCCCCC---
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDP-------------AK----WGEIADIVAALSIPVIANGDVFE--- 213 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~-------------~~----~~~i~~i~~~~~iPVi~nGgI~s--- 213 (326)
++.+++.+.++.+++. +|+|++.--..+....|+ .+ .+.++++++.+++||..-++++.
T Consensus 16 ~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~ 94 (248)
T 1geq_A 16 PDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYR 94 (248)
T ss_dssp SCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhh
Confidence 4447899999999999 999998621111111111 13 56788899888999987665554
Q ss_pred ---HHHHHHHHHhcCCcEEEeccchhcCcc
Q 020428 214 ---YDDFQRIKTAAGASSVMAARGALWNAS 240 (326)
Q Consensus 214 ---~~d~~~~l~~~Gad~VmiGr~~l~~P~ 240 (326)
.+.++.++ ..|||+|.++.-...++.
T Consensus 95 ~~~~~~~~~~~-~~Gad~v~~~~~~~~~~~ 123 (248)
T 1geq_A 95 AGVRNFLAEAK-ASGVDGILVVDLPVFHAK 123 (248)
T ss_dssp HCHHHHHHHHH-HHTCCEEEETTCCGGGHH
T ss_pred cCHHHHHHHHH-HCCCCEEEECCCChhhHH
Confidence 46777777 699999999965444443
No 453
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=94.51 E-value=0.067 Score=49.76 Aligned_cols=68 Identities=13% Similarity=0.140 Sum_probs=50.7
Q ss_pred HHHHHHHHHc--CCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCCCCCHHHHHHHHHhcCCcEEEecc
Q 020428 160 VELARRIEKT--GVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGDVFEYDDFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 160 ~e~a~~l~~~--G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGgI~s~~d~~~~l~~~Gad~VmiGr 233 (326)
.+.++.+.+. |++.+.+|... . ....-|+.++++++.. ++||++ |++.|+++++.+. +.|+|+|.++-
T Consensus 120 ~~~~~~l~~~~~g~~~i~i~~~~---g-~~~~~~~~i~~lr~~~~~~~vi~-g~v~t~e~A~~a~-~aGaD~I~v~~ 190 (351)
T 2c6q_A 120 FEQLEQILEAIPQVKYICLDVAN---G-YSEHFVEFVKDVRKRFPQHTIMA-GNVVTGEMVEELI-LSGADIIKVGI 190 (351)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSC---T-TBHHHHHHHHHHHHHCTTSEEEE-EEECSHHHHHHHH-HTTCSEEEECS
T ss_pred HHHHHHHHhccCCCCEEEEEecC---C-CcHHHHHHHHHHHHhcCCCeEEE-EeCCCHHHHHHHH-HhCCCEEEECC
Confidence 3455555565 99999887421 1 1122478899999988 899884 7789999999999 69999998863
No 454
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=94.51 E-value=0.55 Score=44.59 Aligned_cols=151 Identities=13% Similarity=0.052 Sum_probs=92.6
Q ss_pred CcEEEEE---CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc---ccCcEEE
Q 020428 76 NHVVFQM---GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN---LDVPVTC 148 (326)
Q Consensus 76 ~p~~vQl---~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~---~~~pv~v 148 (326)
.|+++-+ +|+.+ ...+.++.+.+ |+.+|.|-=..+.++.+..-.|-.|. ..+...+-|++++.+ .+.++.+
T Consensus 149 ~PIiaD~DtGfG~~~-nv~~tvk~~i~AGaaGi~IEDq~~~~KkCGH~~gk~lv-p~~e~v~rI~AAr~A~~~~g~d~vI 226 (429)
T 1f8m_A 149 APIVADGEAGFGGAL-NVYELQKALIAAGVAGSHWEDQLASEKKCGHLGGKVLI-PTQQHIRTLTSARLAADVADVPTVV 226 (429)
T ss_dssp CCEEEECTTTTSSHH-HHHHHHHHHHHTTCSEEEEECBCGGGCCCTTSSCCEEC-CHHHHHHHHHHHHHHHHHTTCCCEE
T ss_pred CCEEEECCCCCCCcH-HHHHHHHHHHHcCCEEEEEecCCCccccccCCCCCeee-CHHHHHHHHHHHHHHHHhcCCCEEE
Confidence 6999988 34444 67777777766 99999987554444433333344444 444444444555444 3566655
Q ss_pred EecCC--------------------------------CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHH
Q 020428 149 KIRLL--------------------------------KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIAD 196 (326)
Q Consensus 149 K~r~g--------------------------------~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~ 196 (326)
--|.. ...+++++-++.+.+ |+|.|-+++. ..+.+.+++
T Consensus 227 iARTDa~~a~li~s~~d~~d~~fl~g~~~~eg~y~~~~gld~AI~Ra~AYa~-gAD~if~e~~--------~~~~eei~~ 297 (429)
T 1f8m_A 227 IARTDAEAATLITSDVDERDQPFITGERTREGFYRTKNGIEPCIARAKAYAP-FADLIWMETG--------TPDLEAARQ 297 (429)
T ss_dssp EEEECTTTCCEESCCCSTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHGG-GCSEEEECCS--------SCCHHHHHH
T ss_pred EEEechhhhccccccccccccccccCCCCcccccccccCHHHHHHHHHHHHh-cCCEEEeCCC--------CCCHHHHHH
Confidence 55542 124678888888888 9999998743 346788888
Q ss_pred HHHhcC--Cc--EE-EeCC-CCC------HHHHH---HHHHhcCCcEEEeccchhc
Q 020428 197 IVAALS--IP--VI-ANGD-VFE------YDDFQ---RIKTAAGASSVMAARGALW 237 (326)
Q Consensus 197 i~~~~~--iP--Vi-~nGg-I~s------~~d~~---~~l~~~Gad~VmiGr~~l~ 237 (326)
+.+.++ .| ++ +|+. -++ .+++. +-+.+.|...+.++-+.+.
T Consensus 298 f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~f~~eL~~lG~~~v~~~l~~~r 353 (429)
T 1f8m_A 298 FSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAKFQKELAAMGFKFQFITLAGFH 353 (429)
T ss_dssp HHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHHHHHHHHHHTEEEEEETTHHHH
T ss_pred HHHHhcccCCCceeecCCCCCCCcccccchhhHhHHHHHHHHcCCeEEEECcHHHH
Confidence 888764 25 44 4442 233 22332 2334678888888866553
No 455
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=94.50 E-value=0.53 Score=40.82 Aligned_cols=86 Identities=20% Similarity=0.283 Sum_probs=53.3
Q ss_pred CcEEEEECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhc--ccCcEEEEecCC
Q 020428 76 NHVVFQMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRN--LDVPVTCKIRLL 153 (326)
Q Consensus 76 ~p~~vQl~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~--~~~pv~vK~r~g 153 (326)
.++++-+=-.+.++..+.++.+...++.+.++.+. - -.+| | ++++++++. ..+.+.+|+ .
T Consensus 13 ~~lilAlD~~~~~~a~~~v~~~~~~v~~~Kvg~~l--f----~~~G------~----~~v~~l~~~~g~~v~lD~Kl--~ 74 (228)
T 3m47_A 13 NRLILAMDLMNRDDALRVTGEVREYIDTVKIGYPL--V----LSEG------M----DIIAEFRKRFGCRIIADFKV--A 74 (228)
T ss_dssp GGEEEECCCCSHHHHHHHHHTTTTTCSEEEEEHHH--H----HHHC------T----HHHHHHHHHHCCEEEEEEEE--C
T ss_pred CCeEEEeCCCCHHHHHHHHHHcCCcccEEEEcHHH--H----HhcC------H----HHHHHHHhcCCCeEEEEEee--c
Confidence 46777765556666666665554457888886421 0 0112 2 345556553 345556666 3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeec
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGR 179 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r 179 (326)
+-+.+....++.+.++|+|.+++|+-
T Consensus 75 DipnTv~~~~~~~~~~gad~vtvh~~ 100 (228)
T 3m47_A 75 DIPETNEKICRATFKAGADAIIVHGF 100 (228)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEEST
T ss_pred ccHhHHHHHHHHHHhCCCCEEEEecc
Confidence 44555666888889999999999975
No 456
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=94.40 E-value=0.13 Score=47.12 Aligned_cols=86 Identities=17% Similarity=0.170 Sum_probs=58.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCC-HHHHHHHHHhc--CCcEEEe-CCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAK-WGEIADIVAAL--SIPVIAN-GDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~-~~~i~~i~~~~--~iPVi~n-GgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-.... .+.++.+.+.+ ++|||+. |+..+.+.++.. .++.|||
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 3567788899999999999999999887754332221 23445555544 6898855 444444443322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 121 avlv~~P~y~~~ 132 (314)
T 3qze_A 121 ACLLVTPYYNKP 132 (314)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998877655
No 457
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=94.34 E-value=0.17 Score=44.66 Aligned_cols=101 Identities=15% Similarity=0.165 Sum_probs=60.5
Q ss_pred HHHHHHHHhhcccCcEEEEecCC-CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCc-------------CC----HH
Q 020428 131 IHDILTMLKRNLDVPVTCKIRLL-KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDP-------------AK----WG 192 (326)
Q Consensus 131 ~~~iv~~v~~~~~~pv~vK~r~g-~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~-------------~~----~~ 192 (326)
+.+.+..+++.-...+..=+-.+ ++.+++.+.++.++++|+|.|.+-.-..+....+| .+ ++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~ 84 (262)
T 1rd5_A 5 VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLE 84 (262)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 34445555443222333333233 45688999999999999999998432111111111 11 45
Q ss_pred HHHHHHHhcCCcEEEeCCCCCHH---HHHHHHHhcCCcEEEecc
Q 020428 193 EIADIVAALSIPVIANGDVFEYD---DFQRIKTAAGASSVMAAR 233 (326)
Q Consensus 193 ~i~~i~~~~~iPVi~nGgI~s~~---d~~~~l~~~Gad~VmiGr 233 (326)
.++++++.+++||+.++.. ++. .++.+. ..|+|+|.+.-
T Consensus 85 ~i~~ir~~~~~Pv~~m~~~-~~~~~~~~~~a~-~aGadgv~v~d 126 (262)
T 1rd5_A 85 MLREVTPELSCPVVLLSYY-KPIMFRSLAKMK-EAGVHGLIVPD 126 (262)
T ss_dssp HHHHHGGGCSSCEEEECCS-HHHHSCCTHHHH-HTTCCEEECTT
T ss_pred HHHHHHhcCCCCEEEEecC-cHHHHHHHHHHH-HcCCCEEEEcC
Confidence 6788888889999987522 221 123355 69999999863
No 458
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=94.34 E-value=0.14 Score=46.50 Aligned_cols=86 Identities=20% Similarity=0.221 Sum_probs=58.6
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++|||+ .|+..+.+.++.. .++.|||
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 356678899999999999999999888775433222 123455555544 689874 5655555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 110 avlv~~P~y~~~ 121 (301)
T 1xky_A 110 AVMLVAPYYNKP 121 (301)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998877655
No 459
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=94.32 E-value=0.13 Score=46.44 Aligned_cols=86 Identities=14% Similarity=0.134 Sum_probs=57.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHH---HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIANGDVFEYDDFQRI---KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~---l~~~Gad 227 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++|||+.-|-.+.+++.++ .++.|||
T Consensus 20 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 99 (292)
T 3daq_A 20 VNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGAD 99 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCC
Confidence 356678889999999999999999988774432221 123455555554 6899865444444444443 2357999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 100 avlv~~P~y~~~ 111 (292)
T 3daq_A 100 AIMLITPYYNKT 111 (292)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999997766554
No 460
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=94.32 E-value=0.14 Score=46.31 Aligned_cols=86 Identities=15% Similarity=0.142 Sum_probs=57.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEe-CCCCCHHHHHH--HHHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIAN-GDVFEYDDFQR--IKTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~n-GgI~s~~d~~~--~l~~~Gad 227 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++|||+. |+..+.+.++. ..++.|||
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gad 104 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGAD 104 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 356678889999999999999999988765432222 123455555544 6898854 44444444332 23468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 105 avlv~~P~y~~~ 116 (297)
T 3flu_A 105 YTLSVVPYYNKP 116 (297)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 461
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=94.31 E-value=0.36 Score=41.88 Aligned_cols=90 Identities=20% Similarity=0.259 Sum_probs=67.5
Q ss_pred HHHHHHHHhhcccCcEEEEecCCCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCC
Q 020428 131 IHDILTMLKRNLDVPVTCKIRLLKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGD 210 (326)
Q Consensus 131 ~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGg 210 (326)
..++++.+.+ .|+..=+|. .+.++..++++.+.+.|++.|.+.-++ +...+.++++++.++--+++.|-
T Consensus 16 ~~~~~~~l~~---~~ii~V~r~-~~~~~~~~~~~al~~gGv~~iel~~k~-------~~~~~~i~~l~~~~~~~~igagt 84 (225)
T 1mxs_A 16 AARIDAICEK---ARILPVITI-AREEDILPLADALAAGGIRTLEVTLRS-------QHGLKAIQVLREQRPELCVGAGT 84 (225)
T ss_dssp HHHHHHHHHH---HSEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEESSS-------THHHHHHHHHHHHCTTSEEEEEC
T ss_pred HHHHHHHHHH---CCEEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEecCC-------ccHHHHHHHHHHhCcccEEeeCe
Confidence 4445555554 356655664 466789999999999999999886432 23457788888877444677788
Q ss_pred CCCHHHHHHHHHhcCCcEEEec
Q 020428 211 VFEYDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 211 I~s~~d~~~~l~~~Gad~VmiG 232 (326)
+.+.+++..++ ..|||+|..|
T Consensus 85 vl~~d~~~~A~-~aGAd~v~~p 105 (225)
T 1mxs_A 85 VLDRSMFAAVE-AAGAQFVVTP 105 (225)
T ss_dssp CCSHHHHHHHH-HHTCSSEECS
T ss_pred EeeHHHHHHHH-HCCCCEEEeC
Confidence 99999999999 6999999988
No 462
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=94.23 E-value=0.16 Score=45.93 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=58.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-... ..+.++.+.+.+ ++|||+ .|+..+.+.++.. .++.|||
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 456678889999999999999999988775433222 234455555544 589874 4555554443322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 99 avlv~~P~y~~~ 110 (291)
T 3a5f_A 99 GLLVITPYYNKT 110 (291)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999999888655
No 463
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.21 E-value=0.7 Score=41.77 Aligned_cols=147 Identities=17% Similarity=0.124 Sum_probs=87.0
Q ss_pred cEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC-
Q 020428 77 HVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK- 154 (326)
Q Consensus 77 p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~- 154 (326)
|++ =+...|+-. |+++.+ |++.|=+.-.+ ... ..-|+-....-..+.+...++.|...++.||++-+-.|+
T Consensus 18 ~i~-~~~a~D~~s----A~~~~~aG~~ai~vs~~~-~a~-~~~G~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg 90 (295)
T 1xg4_A 18 PLQ-IVGTINANH----ALLAQRAGYQAIYLSGGG-VAA-GSLGLPDLGISTLDDVLTDIRRITDVCSLPLLVDADIGFG 90 (295)
T ss_dssp SEE-EEECSSHHH----HHHHHHTTCSCEEECHHH-HHH-TTTCCCSSSCSCHHHHHHHHHHHHHHCCSCEEEECTTCSS
T ss_pred cEE-EecCcCHHH----HHHHHHcCCCEEEECchH-hhh-hhcCCCCCCCCCHHHHHHHHHHHHhhCCCCEEecCCcccC
Confidence 443 355566433 444444 88888764210 000 012232333445677888888888888999999998875
Q ss_pred -ChHHHHHHHHHHHHcCCcEEEEeecccCCC---CCC---cCCHHHHHHHHH---hc-CCcEEEeCCCCC---------H
Q 020428 155 -SSQDTVELARRIEKTGVSALAVHGRKVADR---PRD---PAKWGEIADIVA---AL-SIPVIANGDVFE---------Y 214 (326)
Q Consensus 155 -~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~---~~~---~~~~~~i~~i~~---~~-~iPVi~nGgI~s---------~ 214 (326)
++.+..+.++.+.++|+++|++-+...... ..+ .+.-+.+.+|+. .- ..++..+|-... .
T Consensus 91 ~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai 170 (295)
T 1xg4_A 91 SSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAI 170 (295)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHH
Confidence 578899999999999999999987653211 111 111234444443 32 344444443332 2
Q ss_pred HHHHHHHHhcCCcEEEe
Q 020428 215 DDFQRIKTAAGASSVMA 231 (326)
Q Consensus 215 ~d~~~~l~~~Gad~Vmi 231 (326)
+++..+. +.|||++.+
T Consensus 171 ~ra~ay~-eAGAd~i~~ 186 (295)
T 1xg4_A 171 ERAQAYV-EAGAEMLFP 186 (295)
T ss_dssp HHHHHHH-HTTCSEEEE
T ss_pred HHHHHHH-HcCCCEEEE
Confidence 2333333 689999988
No 464
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=94.20 E-value=0.15 Score=45.60 Aligned_cols=71 Identities=25% Similarity=0.231 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHcCCcEEEEeecc-----cCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEE
Q 020428 158 DTVELARRIEKTGVSALAVHGRK-----VADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSV 229 (326)
Q Consensus 158 ~~~e~a~~l~~~G~d~i~vh~r~-----~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~V 229 (326)
...+.|+.++++|+.+|.+--|. ..++-....+.+.|++|++.+++||++==-|....+++.+. ..|+|.|
T Consensus 19 ~~~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~dp~~I~~I~~aVsIPVm~k~righ~~EAqile-a~GaD~I 94 (291)
T 3o07_A 19 VTPEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSDPKMIKDIMNSVSIPVMAKVRIGHFVEAQIIE-ALEVDYI 94 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCCHHHHHHHHTTCSSCEEEEEETTCHHHHHHHH-HTTCSEE
T ss_pred CCHHHHHHHHHhCchhhhhccCCCchhhhcCCccccCCHHHHHHHHHhCCCCeEEEEecCcHHHHHHHH-HcCCCEE
Confidence 35678999999999999876332 22333345688999999999999999988888888887666 6999988
No 465
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=94.16 E-value=0.99 Score=38.98 Aligned_cols=114 Identities=11% Similarity=0.073 Sum_probs=75.2
Q ss_pred CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHh---hcccCcEEEEecC--C---CChHH---HHHHHHHHHH
Q 020428 100 DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLK---RNLDVPVTCKIRL--L---KSSQD---TVELARRIEK 168 (326)
Q Consensus 100 ~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~---~~~~~pv~vK~r~--g---~~~~~---~~e~a~~l~~ 168 (326)
|+|-|||+.+=.. +.+--.... ++.++ +.+++||.|=+|. | ++..+ -.+-++.+.+
T Consensus 21 GAdRIELc~~L~~---------GGlTPS~g~----i~~~~~~~~~~~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~ 87 (224)
T 2bdq_A 21 IISRVELCDNLAV---------GGTTPSYGV----IKEANQYLHEKGISVAVMIRPRGGNFVYNDLELRIMEEDILRAVE 87 (224)
T ss_dssp TCCEEEEEBCGGG---------TCBCCCHHH----HHHHHHHHHHTTCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCccc---------CCcCCCHHH----HHHHHHhhhhcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 8999999743110 011112223 34444 6678999998888 3 23333 4555678889
Q ss_pred cCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeCC---C--CCHHHHHHHHHhcCCcEEE
Q 020428 169 TGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANGD---V--FEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 169 ~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nGg---I--~s~~d~~~~l~~~Gad~Vm 230 (326)
+|+|+|++-.-+.+ +..|.+.++++.+.. ++|+..-=- + .++..+.+.+...|++.|.
T Consensus 88 ~GadGvV~G~Lt~d----g~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~rIL 151 (224)
T 2bdq_A 88 LESDALVLGILTSN----NHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVALGFTRIL 151 (224)
T ss_dssp TTCSEEEECCBCTT----SSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEEeeECCC----CCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHcCCCEEE
Confidence 99999988666554 567899998887654 678775432 3 6677766666678999886
No 466
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=94.13 E-value=2.2 Score=37.08 Aligned_cols=138 Identities=12% Similarity=0.105 Sum_probs=86.3
Q ss_pred cEEEEECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecC-
Q 020428 77 HVVFQMGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRL- 152 (326)
Q Consensus 77 p~~vQl~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~- 152 (326)
.+++-|.+ .+.+++...++.+.. ++|.||+=..+=.. .+++.+.+.+..+++.. ++|+.+-+|.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~------------~~~~~v~~~~~~lr~~~~~~PiI~T~R~~ 72 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFEN------------VTVDQVAEMITKLKVMQDSFKLLVTYRTK 72 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTT------------CCHHHHHHHHHHHC---CCSEEEEECCBG
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEeccccc------------CCHHHHHHHHHHHHHhccCCCEEEEeecc
Confidence 58889999 998888777776655 89999996543111 14678889999999887 7899998887
Q ss_pred ---C---CChHHHHHHHHHHHHc-CCcEEEEeecccCCCCCCcCCHHHHHHHHH---hcCCcEEEeCC----CCCHHHHH
Q 020428 153 ---L---KSSQDTVELARRIEKT-GVSALAVHGRKVADRPRDPAKWGEIADIVA---ALSIPVIANGD----VFEYDDFQ 218 (326)
Q Consensus 153 ---g---~~~~~~~e~a~~l~~~-G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~---~~~iPVi~nGg----I~s~~d~~ 218 (326)
| .+.+...++.+.+.+. ++|+|.|--... .+-+.+.++.+ ..+..||++=- --+.+++.
T Consensus 73 ~eGG~~~~~~~~~~~ll~~~~~~~~~d~iDvEl~~~-------~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~ 145 (238)
T 1sfl_A 73 LQGGYGQFTNDSYLNLISDLANINGIDMIDIEWQAD-------IDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQ 145 (238)
T ss_dssp GGTSCBCCCHHHHHHHHHHGGGCTTCCEEEEECCTT-------SCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHH
T ss_pred ccCCCCCCCHHHHHHHHHHHHHhCCCCEEEEEccCC-------CChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHH
Confidence 2 2456677888887776 699999864320 01233333322 34677887632 23345555
Q ss_pred HHH---HhcCCcEEEecc
Q 020428 219 RIK---TAAGASSVMAAR 233 (326)
Q Consensus 219 ~~l---~~~Gad~VmiGr 233 (326)
..+ ...|||.|=++.
T Consensus 146 ~~~~~~~~~gaDivKia~ 163 (238)
T 1sfl_A 146 FIFFKMQKFNPEYVKLAV 163 (238)
T ss_dssp HHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEe
Confidence 444 257888776654
No 467
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=94.09 E-value=0.53 Score=44.68 Aligned_cols=152 Identities=11% Similarity=0.037 Sum_probs=88.7
Q ss_pred CCcEEEEE---CCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc---cCcEE
Q 020428 75 RNHVVFQM---GTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL---DVPVT 147 (326)
Q Consensus 75 ~~p~~vQl---~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~---~~pv~ 147 (326)
..|+++-+ +|+ +....+.++.+.+ |+.+|.|-=....++.+..-.|..|....+.+.. |++++.+. +.++.
T Consensus 145 ~lPIiaD~DtGfG~-~~nv~rtVk~~~~AGaAGi~IEDQ~~~~KkCGH~~gk~lvp~ee~v~r-I~AAr~A~~~~g~d~v 222 (433)
T 3eol_A 145 FAPIVADAEAGFGD-PLDAFEIMKAYIEAGAAGVHFEDQLASEKKCGHLGGKVLIPTAAHIRN-LNAARLAADVMGTPTL 222 (433)
T ss_dssp CCCEEEECC---CC-HHHHHHHHHHHHHHTCSEEEEESBCC---------CCEECCHHHHHHH-HHHHHHHHHHHTCCCE
T ss_pred CCCeEEECCCCCCC-cHHHHHHHHHHHHcCCeEEEEecCCCCCCcCCCCCCCcccCHHHHHHH-HHHHHHHHHhcCCCEE
Confidence 46999988 344 4467777777766 9999999755544444443334445444444444 44444332 45555
Q ss_pred EEecCC----------------------------------CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHH
Q 020428 148 CKIRLL----------------------------------KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGE 193 (326)
Q Consensus 148 vK~r~g----------------------------------~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~ 193 (326)
+--|.. ...+++++-++.+.+ |+|.|-++.. ..+.+.
T Consensus 223 IiARTDA~~a~l~~s~~d~rd~~fl~g~g~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~If~e~~--------~~~~ee 293 (433)
T 3eol_A 223 IVARTDAEAAKLLTSDIDERDQPFVDYEAGRTAEGFYQVKNGIEPCIARAIAYAP-YCDLIWMETS--------KPDLAQ 293 (433)
T ss_dssp EEEEECTTTCCEESCCCSTTTGGGBCSSSCBCTTCCEEBCCSHHHHHHHHHHHGG-GCSEEEECCS--------SCCHHH
T ss_pred EEEEcCCccccccccCcccccccceeccCcccccccccccCCHHHHHHHHHHHHh-cCCEEEEeCC--------CCCHHH
Confidence 444432 235678888888888 9999999754 236777
Q ss_pred HHHHHHhcC----CcEEEeCC--CCC------HHHHHH---HHHhcCCcEEEeccchhc
Q 020428 194 IADIVAALS----IPVIANGD--VFE------YDDFQR---IKTAAGASSVMAARGALW 237 (326)
Q Consensus 194 i~~i~~~~~----iPVi~nGg--I~s------~~d~~~---~l~~~Gad~VmiGr~~l~ 237 (326)
++++.+.++ .++++.|. -++ .+++.. -|.+.|+..|.++-+++.
T Consensus 294 i~~f~~~v~~~~P~~~L~~~~sPsfnw~~~~~~~~~~~f~~eLa~lGv~~v~~~~a~~r 352 (433)
T 3eol_A 294 ARRFAEAVHKAHPGKLLAYNCSPSFNWKKNLDDATIAKFQRELGAMGYKFQFITLAGFH 352 (433)
T ss_dssp HHHHHHHHHHHSTTCCEEEECCSSSCHHHHSCHHHHHHHHHHHHHHTEEEEEETTHHHH
T ss_pred HHHHHHHhcccCCCcccccCCCCCCcccccCChhHHhHHHHHHHHcCCeEEEeCcHHHH
Confidence 877777653 43443333 232 233322 244689999999977654
No 468
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=94.04 E-value=0.15 Score=46.05 Aligned_cols=86 Identities=13% Similarity=0.118 Sum_probs=57.5
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHH---HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIANGDVFEYDDFQRI---KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~---l~~~Gad 227 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++|||+.=|=.+.+++.++ .++.|||
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGAD 98 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 356778889999999999999999887764432221 123455555544 6898855343344444333 3468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 99 avlv~~P~y~~~ 110 (291)
T 3tak_A 99 AALLVTPYYNKP 110 (291)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998877655
No 469
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=94.02 E-value=0.15 Score=46.16 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=57.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEE-EeCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVI-ANGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi-~nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-... ..+.++.+.+.+ ++||| +.|+..+.+.++.. .++.|||
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 100 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGAR 100 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCC
Confidence 356678899999999999999999988775433222 234455555555 58987 55665555544322 2468999
Q ss_pred EEEeccchhcC
Q 020428 228 SVMAARGALWN 238 (326)
Q Consensus 228 ~VmiGr~~l~~ 238 (326)
++|+-...+..
T Consensus 101 avlv~~P~y~~ 111 (294)
T 3b4u_A 101 NILLAPPSYFK 111 (294)
T ss_dssp EEEECCCCSSC
T ss_pred EEEEcCCcCCC
Confidence 99999776544
No 470
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=94.00 E-value=0.16 Score=46.14 Aligned_cols=86 Identities=19% Similarity=0.200 Sum_probs=59.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEE-EeCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVI-ANGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi-~nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++||| +.|+..+.+.++.. .++.|||
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCC
Confidence 466778899999999999999999988775433222 224455555544 58987 45665555544322 2457999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 110 avlv~~P~y~~~ 121 (306)
T 1o5k_A 110 GVLVVTPYYNKP 121 (306)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998887665
No 471
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=94.00 E-value=0.16 Score=45.89 Aligned_cols=86 Identities=16% Similarity=0.051 Sum_probs=58.5
Q ss_pred CChHHHHHHHHHHHH-cCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCC
Q 020428 154 KSSQDTVELARRIEK-TGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGA 226 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~-~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Ga 226 (326)
.|.+...++++.+.+ .|+++|.+.|-|.+...-... ..+.++.+.+.+ ++|||+ .|+..+.+.++.. .+..||
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGY 100 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCC
Confidence 356678899999999 999999999988775433222 234455555544 689874 4555555444322 245799
Q ss_pred cEEEeccchhcCc
Q 020428 227 SSVMAARGALWNA 239 (326)
Q Consensus 227 d~VmiGr~~l~~P 239 (326)
|++|+-...+..|
T Consensus 101 davlv~~P~y~~~ 113 (293)
T 1f6k_A 101 DCLSAVTPFYYKF 113 (293)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEECCCCCCCC
Confidence 9999998877655
No 472
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=93.99 E-value=0.15 Score=46.30 Aligned_cols=86 Identities=16% Similarity=0.078 Sum_probs=58.6
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..++++.+.+.+ ++|||+ .|+..+.+.++.. .++.|||
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 356678899999999999999999888765433222 233455555544 689884 5655555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 109 avlv~~P~y~~~ 120 (303)
T 2wkj_A 109 AVSAVTPFYYPF 120 (303)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEecCCCCCCC
Confidence 999998877655
No 473
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=93.99 E-value=0.19 Score=45.87 Aligned_cols=84 Identities=14% Similarity=0.156 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHH-hhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHH
Q 020428 85 SDAVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELA 163 (326)
Q Consensus 85 ~~~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a 163 (326)
.+++...+.|+. +++|+|.||||+-+-.|....++-.-......+.+..+++++++.+++|||+-..- .+++
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISIDT~~-------~~Va 118 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISVDTSR-------PRVM 118 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEEECSC-------HHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEEeCCC-------HHHH
Confidence 356666655554 45599999998643333100000000112223446677888888789999998742 2455
Q ss_pred HHHHHcCCcEEE
Q 020428 164 RRIEKTGVSALA 175 (326)
Q Consensus 164 ~~l~~~G~d~i~ 175 (326)
+...++|++.|.
T Consensus 119 ~aAl~aGa~iIN 130 (314)
T 3tr9_A 119 REAVNTGADMIN 130 (314)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHcCCCEEE
Confidence 556666888653
No 474
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=93.97 E-value=0.16 Score=46.24 Aligned_cols=85 Identities=19% Similarity=0.230 Sum_probs=58.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEe-CCCCCHHHHHHHH---HhcCC
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIAN-GDVFEYDDFQRIK---TAAGA 226 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~n-GgI~s~~d~~~~l---~~~Ga 226 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..++++.+.+.+ ++|||+. |+..+ +++.++. ++.||
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t-~~ai~la~~a~~~Ga 111 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDT-AHSIRLAKACAAEGA 111 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCH-HHHHHHHHHHHHHTC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCH-HHHHHHHHHHHHcCC
Confidence 456778899999999999999999988764432221 233455555554 6899865 44544 4443332 45799
Q ss_pred cEEEeccchhcCc
Q 020428 227 SSVMAARGALWNA 239 (326)
Q Consensus 227 d~VmiGr~~l~~P 239 (326)
|+|++-...+..|
T Consensus 112 davlv~~P~y~~~ 124 (304)
T 3l21_A 112 HGLLVVTPYYSKP 124 (304)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEECCCCCCCC
Confidence 9999998877665
No 475
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=93.93 E-value=0.16 Score=45.85 Aligned_cols=86 Identities=16% Similarity=0.057 Sum_probs=58.9
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-... ..+.++.+.+.+ ++|||+ .|+..+.+.++.. .+..|||
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGAD 97 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 466778899999999999999999988775433221 234455555544 589874 4655555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 98 avlv~~P~y~~~ 109 (294)
T 2ehh_A 98 GALVVVPYYNKP 109 (294)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 476
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=93.91 E-value=0.15 Score=45.99 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=58.4
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHHH--HhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRIK--TAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~l--~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-... ..+.++.+.+.+ ++|||+ .|+..+.+.++... +..|||
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 98 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIV 98 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCC
Confidence 356678899999999999999999988775433222 234455555544 589874 45555554443322 357999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 99 avlv~~P~y~~~ 110 (292)
T 2ojp_A 99 GCLTVTPYYNRP 110 (292)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 477
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=93.88 E-value=0.17 Score=45.64 Aligned_cols=86 Identities=15% Similarity=0.140 Sum_probs=59.0
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEE-EeCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVI-ANGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi-~nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++||| +.|+..+.+.++.. .+..|||
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gad 97 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGAD 97 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 466778899999999999999999887765433222 234455555544 58987 45665555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 98 avlv~~P~y~~~ 109 (289)
T 2yxg_A 98 AVLSITPYYNKP 109 (289)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 478
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=93.84 E-value=1.5 Score=39.35 Aligned_cols=165 Identities=9% Similarity=0.059 Sum_probs=95.0
Q ss_pred EECCCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--------
Q 020428 81 QMGTSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL-------- 152 (326)
Q Consensus 81 Ql~g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~-------- 152 (326)
+.+..+.+.+.++.+ .|++.|-+-.+. +....+...+.....+.+.+.++++.+++. +++|..-+..
T Consensus 76 ~~l~~n~~~i~~a~~---~G~~~V~i~~~~-S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~ 150 (295)
T 1ydn_A 76 SVLVPNMKGYEAAAA---AHADEIAVFISA-SEGFSKANINCTIAESIERLSPVIGAAIND-GLAIRGYVSCVVECPYDG 150 (295)
T ss_dssp EEECSSHHHHHHHHH---TTCSEEEEEEES-CHHHHHHHTSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECSSEETTTE
T ss_pred EEEeCCHHHHHHHHH---CCCCEEEEEEec-CHHHHHHHcCCCHHHHHHHHHHHHHHHHHc-CCeEEEEEEEEecCCcCC
Confidence 333455555444332 488887774321 111111112223334455666667776654 6666533332
Q ss_pred CCChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcC-CcEEEeC----CCCCHHHHHHHHHhcCCc
Q 020428 153 LKSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALS-IPVIANG----DVFEYDDFQRIKTAAGAS 227 (326)
Q Consensus 153 g~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~-iPVi~nG----gI~s~~d~~~~l~~~Gad 227 (326)
..+++...++++.+.+.|+|.|.+..- .+...+....+.++.+++.++ +|+-.-| |+. ...+...+ +.|++
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt--~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla-~an~l~Ai-~aG~~ 226 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDT--IGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRA-LDNIRVSL-EKGLR 226 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEET--TSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCH-HHHHHHHH-HHTCC
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCC--CCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchH-HHHHHHHH-HhCCC
Confidence 135788999999999999999998742 111222234677888888886 8887554 333 34456666 58999
Q ss_pred EEEeccchhc-CcccccccCCCCHHHHH
Q 020428 228 SVMAARGALW-NASIFSSQGKLHWEDVK 254 (326)
Q Consensus 228 ~VmiGr~~l~-~P~lf~~~~~~~~~~~~ 254 (326)
.|-+.=+=++ .|......|..+.+++.
T Consensus 227 ~vd~sv~GlG~cp~a~g~~GN~~~e~lv 254 (295)
T 1ydn_A 227 VFDASVGGLGGCPFAPGAKGNVDTVAVV 254 (295)
T ss_dssp EEEEBTTCCSCBTTBTTSCCBCBHHHHH
T ss_pred EEEeccccCCCCCCCCCCcCChhHHHHH
Confidence 8887643333 67655445555555444
No 479
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.80 E-value=1.5 Score=39.58 Aligned_cols=162 Identities=11% Similarity=0.064 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecC--C------CCh
Q 020428 85 SDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRL--L------KSS 156 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~--g------~~~ 156 (326)
.+.+++..+.+ .|++.|.+-.++- ....+...+.....+.+.+.++++.+++. ++.|..-+.. + .++
T Consensus 84 ~~~~~i~~a~~---aG~~~v~i~~~~s-~~~~~~~~~~s~ee~l~~~~~~v~~a~~~-G~~V~~~l~~~~~~e~~~~~~~ 158 (302)
T 2ftp_A 84 PNLKGFEAALE---SGVKEVAVFAAAS-EAFSQRNINCSIKDSLERFVPVLEAARQH-QVRVRGYISCVLGCPYDGDVDP 158 (302)
T ss_dssp CSHHHHHHHHH---TTCCEEEEEEESC-HHHHHHHHSSCHHHHHHHHHHHHHHHHHT-TCEEEEEEECTTCBTTTBCCCH
T ss_pred CCHHHHHHHHh---CCcCEEEEEEecC-HHHHHHHhCCCHHHHHHHHHHHHHHHHHC-CCeEEEEEEEEeeCCcCCCCCH
Confidence 45555554433 4888888743321 11112223333444556667777777664 5555433332 2 356
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc-CCcEEEeC--CCCC-HHHHHHHHHhcCCcEEEec
Q 020428 157 QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL-SIPVIANG--DVFE-YDDFQRIKTAAGASSVMAA 232 (326)
Q Consensus 157 ~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~-~iPVi~nG--gI~s-~~d~~~~l~~~Gad~VmiG 232 (326)
+...++++.+.+.|+|.|.+-.-. +...+....+.++.+++.+ ++|+-.-| +-.. ...+...+ +.|++.|-..
T Consensus 159 ~~~~~~~~~~~~~G~d~i~l~DT~--G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv-~aGa~~vd~t 235 (302)
T 2ftp_A 159 RQVAWVARELQQMGCYEVSLGDTI--GVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASL-LEGIAVFDSS 235 (302)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEESS--SCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHH-HTTCCEEEEB
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCC--CCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHH-HhCCCEEEec
Confidence 789999999999999999886322 2222223467788888888 58987655 3333 34456667 5899999887
Q ss_pred cchhcC-cccccccCCCCHHHHH
Q 020428 233 RGALWN-ASIFSSQGKLHWEDVK 254 (326)
Q Consensus 233 r~~l~~-P~lf~~~~~~~~~~~~ 254 (326)
=.=++. |.-....|..+.++++
T Consensus 236 v~GlG~cp~a~gr~GN~~~E~lv 258 (302)
T 2ftp_A 236 VAGLGGCPYAKGATGNVASEDVL 258 (302)
T ss_dssp GGGCCBCGGGTTCBCBCBHHHHH
T ss_pred ccccCCCCCCCCCCCChhHHHHH
Confidence 665654 7655555666655554
No 480
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.76 E-value=0.3 Score=44.29 Aligned_cols=97 Identities=22% Similarity=0.214 Sum_probs=55.7
Q ss_pred CHHHHHHHHHH-hhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHh---hcccCcEEEEecCCCChHHHHH
Q 020428 86 DAVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLK---RNLDVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 86 ~~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~---~~~~~pv~vK~r~g~~~~~~~e 161 (326)
+++...+.|+. +.+|+|.||||+|.+ .....+.+.+++..+. +.+++||++-..- .+
T Consensus 35 ~~~~a~~~A~~~v~~GAdiIDIg~g~~------------~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~-------~~ 95 (300)
T 3k13_A 35 KYDEALSIARQQVEDGALVIDVNMDDG------------LLDARTEMTTFLNLIMSEPEIARVPVMIDSSK-------WE 95 (300)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCT------------TSCHHHHHHHHHHHHHTCHHHHTSCEEEECSC-------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC------------CCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCC-------HH
Confidence 34555555554 445999999998633 2233456666666665 4568999997741 23
Q ss_pred HHHHHHH--cCCcEEE-EeecccCCCCCCcCCHHHHHHHHHhcCCcEEE
Q 020428 162 LARRIEK--TGVSALA-VHGRKVADRPRDPAKWGEIADIVAALSIPVIA 207 (326)
Q Consensus 162 ~a~~l~~--~G~d~i~-vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~ 207 (326)
+++...+ +|++.|. |++-. +...++.+..+.+..+.|||+
T Consensus 96 V~eaaL~~~~Ga~iINdIs~~~------~d~~~~~~~~l~a~~ga~vV~ 138 (300)
T 3k13_A 96 VIEAGLKCLQGKSIVNSISLKE------GEEVFLEHARIIKQYGAATVV 138 (300)
T ss_dssp HHHHHHHHCSSCCEEEEECSTT------CHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhcCCCCEEEeCCccc------CChhHHHHHHHHHHhCCeEEE
Confidence 3444444 5877553 33221 122344455555566777764
No 481
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=93.73 E-value=0.15 Score=46.20 Aligned_cols=86 Identities=17% Similarity=0.170 Sum_probs=58.8
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEE-EeCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVI-ANGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi-~nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++||| +.|+..+.+.++.. .++.|||
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 97 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGAD 97 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCC
Confidence 456678899999999999999999988775433222 234455555544 58987 45665555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 98 avlv~~P~y~~~ 109 (297)
T 2rfg_A 98 AVLCVAGYYNRP 109 (297)
T ss_dssp EEEECCCTTTCC
T ss_pred EEEEcCCCCCCC
Confidence 999998877655
No 482
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=93.70 E-value=0.15 Score=46.58 Aligned_cols=86 Identities=14% Similarity=0.136 Sum_probs=57.6
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEe-CCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIAN-GDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~n-GgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..++++.+.+.+ ++|||+. |+..+.+.++.. .+..|||
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 356778889999999999999999887764432221 123455555544 6898855 444444443322 3468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 120 avlv~~P~y~~~ 131 (315)
T 3si9_A 120 AVLVVTPYYNRP 131 (315)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 483
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=93.66 E-value=0.18 Score=45.78 Aligned_cols=86 Identities=15% Similarity=0.139 Sum_probs=58.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc---CCcEEEe-CCCCCHHHHHHH--HHhcCC
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL---SIPVIAN-GDVFEYDDFQRI--KTAAGA 226 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~---~iPVi~n-GgI~s~~d~~~~--l~~~Ga 226 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++|||+. |+..+.+.++.. .+..||
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 466778899999999999999999887764432221 223455555544 5899865 444444443322 246899
Q ss_pred cEEEeccchhcCc
Q 020428 227 SSVMAARGALWNA 239 (326)
Q Consensus 227 d~VmiGr~~l~~P 239 (326)
|++|+-...+..|
T Consensus 105 davlv~~P~y~~~ 117 (301)
T 3m5v_A 105 DGILSVAPYYNKP 117 (301)
T ss_dssp SEEEEECCCSSCC
T ss_pred CEEEEcCCCCCCC
Confidence 9999998877665
No 484
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=93.66 E-value=0.16 Score=46.36 Aligned_cols=86 Identities=17% Similarity=0.174 Sum_probs=58.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEe-CCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIAN-GDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~n-GgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..++++.+.+.+ ++|||+. |+..+.+.++.. .++.|||
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 356778899999999999999999988774432221 233455555544 6898855 445444443322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
++|+-...+..|
T Consensus 122 avlv~~P~y~~~ 133 (315)
T 3na8_A 122 AVMVLPISYWKL 133 (315)
T ss_dssp EEEECCCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877655
No 485
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=93.66 E-value=0.16 Score=46.77 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=59.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEE-EeCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVI-ANGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi-~nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+....+++.+.+.|+++|.+-|-|.+...-... ..++++.+.+.+ ++||| +.|+..+.+.++.. .+..|||
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 456678899999999999999999988775432221 234455555554 59987 55666655544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
+|++-...+..|
T Consensus 132 avlv~~P~Y~~~ 143 (332)
T 2r8w_A 132 ALLLAPVSYTPL 143 (332)
T ss_dssp EEEECCCCSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998877654
No 486
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=93.64 E-value=0.46 Score=42.58 Aligned_cols=118 Identities=12% Similarity=0.045 Sum_probs=80.3
Q ss_pred CCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHHHHH
Q 020428 85 SDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVELAR 164 (326)
Q Consensus 85 ~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e~a~ 164 (326)
-|.+.+.+.++.+.+.+++|=++. ..|-+..-..+.-.++++.+.+ .+||.+-+. +.+..+++++++
T Consensus 16 iD~~~l~~lv~~li~~v~gl~v~G----------ttGE~~~Ls~~Er~~v~~~~~~--rvpviaGvg-~~~t~~ai~la~ 82 (283)
T 2pcq_A 16 LDEEAFRELAQALEPLVDGLLVYG----------SNGEGVHLTPEERARGLRALRP--RKPFLVGLM-EETLPQAEGALL 82 (283)
T ss_dssp BCHHHHHHHHHHHGGGSSCCEETC----------TTTTGGGSCHHHHHHHHHTCCC--SSCCEEEEC-CSSHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCEEEECC----------cCcCchhcCHHHHHHHHHHHHh--CCcEEEeCC-CCCHHHHHHHHH
Confidence 467777777776543377776653 2344444466777788888877 788888775 256789999999
Q ss_pred HHHHcCCcEEEEeecccCCCCCCc-C---CHHHHHHHHHhcCCcEE-Ee-----CCCCCHHHHHHHH
Q 020428 165 RIEKTGVSALAVHGRKVADRPRDP-A---KWGEIADIVAALSIPVI-AN-----GDVFEYDDFQRIK 221 (326)
Q Consensus 165 ~l~~~G~d~i~vh~r~~~~~~~~~-~---~~~~i~~i~~~~~iPVi-~n-----GgI~s~~d~~~~l 221 (326)
.+++.|+|++.+..= .|..+ . -++.++.|.+ ++||+ +| |---+++.+.++.
T Consensus 83 ~A~~~Gadavlv~~P----~y~~~~~~~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La 143 (283)
T 2pcq_A 83 EAKAAGAMALLATPP----RYYHGSLGAGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALA 143 (283)
T ss_dssp HHHHHTCSEEEECCC----CTTGGGTTTHHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHT
T ss_pred HHHhcCCCEEEecCC----cCCCCCCHHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHh
Confidence 999999999987532 12222 1 2456677777 78875 45 4335778777775
No 487
>1r6w_A OSB synthase, O-succinylbenzoate synthase, OSBS; enolase superfamily, TIM barrel, capping alpha+beta domain, lyase; HET: 164; 1.62A {Escherichia coli} SCOP: c.1.11.2 d.54.1.1 PDB: 1fhv_A* 1fhu_A 2ofj_A 3gc2_A*
Probab=93.56 E-value=0.07 Score=48.88 Aligned_cols=120 Identities=10% Similarity=0.117 Sum_probs=81.4
Q ss_pred CCCHHHHHHHHHHhhcCCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcc-cCcEEEEecCCCChHHHHHH
Q 020428 84 TSDAVRALTAAKMVCKDVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNL-DVPVTCKIRLLKSSQDTVEL 162 (326)
Q Consensus 84 g~~~~~~~~aa~~~~~~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~-~~pv~vK~r~g~~~~~~~e~ 162 (326)
..+++.+.+.++.. .||..+-+..|.+ +++.-.+.++++|+.+ ++.+.+-..-+|+.+++.++
T Consensus 113 ~~~~~~~~~~a~~~-~G~~~~KiKvG~~---------------~~~~d~~~v~avr~~~~~~~l~vDaN~~~~~~~A~~~ 176 (322)
T 1r6w_A 113 NGDPDDLILKLADM-PGEKVAKVRVGLY---------------EAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQF 176 (322)
T ss_dssp CSCHHHHHHHHHTC-CSSEEEEEECSSS---------------CHHHHHHHHHHHHHHCTTEEEEEECTTCBCHHHHHHH
T ss_pred CCCHHHHHHHHHHh-CCCceEEEEeCCC---------------CHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHH
Confidence 45787776665543 5888888866532 4566667888888876 34444444457888999999
Q ss_pred HHHHHHc---CCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCCCHHHHHHHHHhcCCcEEEe
Q 020428 163 ARRIEKT---GVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 163 a~~l~~~---G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~s~~d~~~~l~~~Gad~Vmi 231 (326)
++.+++. ++.+| ++.. .+++..+++++.+++||.+.=.+.|.+ + .+++..++|.+++
T Consensus 177 ~~~l~~~~~~~i~~i-------EqP~---~~~~~~~~l~~~~~ipIa~dE~~~~~~-~-~~~~~~a~d~i~i 236 (322)
T 1r6w_A 177 AKYVNPDYRDRIAFL-------EEPC---KTRDDSRAFARETGIAIAWDESLREPD-F-AFVAEEGVRAVVI 236 (322)
T ss_dssp HHTSCTTTGGGEEEE-------ECCB---SSHHHHHHHHHHHCCCEEESGGGGSTT-C-CCCCCTTEEEEEE
T ss_pred HHHhhhhccCCeeEE-------ECCC---CChHHHHHHHHhCCCCEEeCCCCCChh-H-hhhhcCCCCEEEE
Confidence 9999887 66654 1111 247778899988999999877777743 3 4443344666655
No 488
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=93.52 E-value=0.18 Score=46.71 Aligned_cols=86 Identities=16% Similarity=0.214 Sum_probs=58.7
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEE-eCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIA-NGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~-nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-... ..++++.+.+.+ ++|||+ .|+..+.+.++.. .+..|||
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 456678899999999999999999988764432221 234455555544 689875 4555555444322 2458999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
+||+-...+..|
T Consensus 129 avlv~~P~Y~~~ 140 (343)
T 2v9d_A 129 GIVVINPYYWKV 140 (343)
T ss_dssp EEEEECCSSSCC
T ss_pred EEEECCCCCCCC
Confidence 999998887655
No 489
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=93.49 E-value=1.3 Score=38.32 Aligned_cols=139 Identities=13% Similarity=0.179 Sum_probs=87.3
Q ss_pred CCcEEEEE------CCCCHHH---HHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccC
Q 020428 75 RNHVVFQM------GTSDAVR---ALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDV 144 (326)
Q Consensus 75 ~~p~~vQl------~g~~~~~---~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~ 144 (326)
+.|+.+=| |..+.++ +.+-++.+.+ |+|+|=+.+=-|.. .-|.+.+.+++++.. +.
T Consensus 54 ~ipV~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~GadGvV~G~Lt~dg-----------~iD~~~~~~Li~~a~---~~ 119 (224)
T 2bdq_A 54 GISVAVMIRPRGGNFVYNDLELRIMEEDILRAVELESDALVLGILTSNN-----------HIDTEAIEQLLPATQ---GL 119 (224)
T ss_dssp TCEEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEECCBCTTS-----------SBCHHHHHHHHHHHT---TC
T ss_pred CCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCCEEEEeeECCCC-----------CcCHHHHHHHHHHhC---CC
Confidence 34666655 2345444 4455555666 99999874322322 136778888887665 45
Q ss_pred cEEEEecCCCCh--HHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhc--CCcEEEeCCCCCHHHHHHH
Q 020428 145 PVTCKIRLLKSS--QDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAAL--SIPVIANGDVFEYDDFQRI 220 (326)
Q Consensus 145 pv~vK~r~g~~~--~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~--~iPVi~nGgI~s~~d~~~~ 220 (326)
|++.- |..+.. .+..+-.+.+.+.|++.|.-||..... .-....+.++++.+.. ++-|++.|||+ .+.+.++
T Consensus 120 ~vTFH-RAFD~~~~~d~~~ale~L~~lGv~rILTSG~~~~~--~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~-~~Ni~~l 195 (224)
T 2bdq_A 120 PLVFH-MAFDVIPKSDQKKSIDQLVALGFTRILLHGSSNGE--PIIENIKHIKALVEYANNRIEIMVGGGVT-AENYQYI 195 (224)
T ss_dssp CEEEC-GGGGGSCTTTHHHHHHHHHHTTCCEEEECSCSSCC--CGGGGHHHHHHHHHHHTTSSEEEECSSCC-TTTHHHH
T ss_pred eEEEE-CchhccCCcCHHHHHHHHHHcCCCEEECCCCCCCC--cHHHHHHHHHHHHHhhCCCeEEEeCCCCC-HHHHHHH
Confidence 66653 222212 456677888899999999877653321 1223466777776543 57788888987 5667778
Q ss_pred HHhcCCcEEEe
Q 020428 221 KTAAGASSVMA 231 (326)
Q Consensus 221 l~~~Gad~Vmi 231 (326)
++.+|++.+=.
T Consensus 196 ~~~tGv~e~H~ 206 (224)
T 2bdq_A 196 CQETGVKQAHG 206 (224)
T ss_dssp HHHHTCCEEEE
T ss_pred HHhhCCCEEcc
Confidence 87799988874
No 490
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=93.48 E-value=0.32 Score=46.31 Aligned_cols=71 Identities=11% Similarity=0.236 Sum_probs=53.2
Q ss_pred CChHHHHHHH-HHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCC-CCCHHHHHHHHHhcCCcEEEe
Q 020428 154 KSSQDTVELA-RRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGD-VFEYDDFQRIKTAAGASSVMA 231 (326)
Q Consensus 154 ~~~~~~~e~a-~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGg-I~s~~d~~~~l~~~Gad~Vmi 231 (326)
|+.+++++++ +.+++.++.+| ++ +..+.|++..+++++..++||.+.=- +++..++.++++...+|.|++
T Consensus 267 ~~~~~ai~~~~~~l~~~~i~~i-------Ee-P~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 267 LTREELLDYYKALVDEYPIVSI-------ED-PFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEE-------EC-CSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred CCHHHHHHHHHHHHhhCCCcEE-------Ec-CCChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 4677888885 48888887665 22 22455899999999999999966544 566999999997666898877
Q ss_pred c
Q 020428 232 A 232 (326)
Q Consensus 232 G 232 (326)
=
T Consensus 339 k 339 (427)
T 2pa6_A 339 K 339 (427)
T ss_dssp C
T ss_pred c
Confidence 3
No 491
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=93.45 E-value=0.8 Score=41.49 Aligned_cols=67 Identities=18% Similarity=0.177 Sum_probs=51.0
Q ss_pred HcCCcEEEEeecccCCCCC---CcCCHHHHHHHHHhc--CCcEEEeCCCCC-HHHHHHHHHhcCCcEEEeccch
Q 020428 168 KTGVSALAVHGRKVADRPR---DPAKWGEIADIVAAL--SIPVIANGDVFE-YDDFQRIKTAAGASSVMAARGA 235 (326)
Q Consensus 168 ~~G~d~i~vh~r~~~~~~~---~~~~~~~i~~i~~~~--~iPVi~nGgI~s-~~d~~~~l~~~Gad~VmiGr~~ 235 (326)
+.|+|.|.+.-.|..+.|. ...+++.+++|.+.+ ++|++.-||=.+ .+++.+++ ..|+.-|=|++.+
T Consensus 182 ~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai-~~GV~KiNi~Tdl 254 (306)
T 3pm6_A 182 ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCI-ERGVAKVNVNRAV 254 (306)
T ss_dssp TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHH-HTTEEEEEESHHH
T ss_pred HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHH-HcCCeEEEeChHH
Confidence 6999999765444444443 346899999999988 799998887555 46688888 6899888888864
No 492
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=93.41 E-value=0.73 Score=42.61 Aligned_cols=89 Identities=7% Similarity=0.036 Sum_probs=60.3
Q ss_pred hcccCcEEEEecCCCChHHHHHHHHHHHHcCCc-EEEEeecccCCC-CCC-cCCHHH----HHHHHHhcCCcEE--EeCC
Q 020428 140 RNLDVPVTCKIRLLKSSQDTVELARRIEKTGVS-ALAVHGRKVADR-PRD-PAKWGE----IADIVAALSIPVI--ANGD 210 (326)
Q Consensus 140 ~~~~~pv~vK~r~g~~~~~~~e~a~~l~~~G~d-~i~vh~r~~~~~-~~~-~~~~~~----i~~i~~~~~iPVi--~nGg 210 (326)
...+.||.+-+. |.+.++..+.++.++++|++ +|.+.-...... ... ..+.+. ++.+++.+++||+ ..-+
T Consensus 125 ~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~ 203 (345)
T 3oix_A 125 QPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY 203 (345)
T ss_dssp STTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC
T ss_pred ccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 345789988875 57789999999999999987 998863322111 011 123444 4455555688986 3344
Q ss_pred CCCHHHHHHHHHhcCCcEEE
Q 020428 211 VFEYDDFQRIKTAAGASSVM 230 (326)
Q Consensus 211 I~s~~d~~~~l~~~Gad~Vm 230 (326)
.+.+++.++++..|++++.
T Consensus 204 -~~~~~~a~~~~~aga~~i~ 222 (345)
T 3oix_A 204 -FDIVHFDQAAAIFNXYPLT 222 (345)
T ss_dssp -CCHHHHHHHHHHHTTSCCS
T ss_pred -CCHHHHHHHHHHhCCCceE
Confidence 5788888888888888764
No 493
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=93.38 E-value=0.24 Score=45.11 Aligned_cols=83 Identities=14% Similarity=0.041 Sum_probs=57.2
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEEEe-CCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVIAN-GDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi~n-GgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...-... ..+.++.+.+.+ ++|||+. |+..+.+.++.. .++.|||
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gad 105 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAA 105 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCC
Confidence 456778889999999999999999988774432221 234455555554 6999855 666555544322 2468999
Q ss_pred EEEeccchh
Q 020428 228 SVMAARGAL 236 (326)
Q Consensus 228 ~VmiGr~~l 236 (326)
++|+-...+
T Consensus 106 avlv~~Pyy 114 (309)
T 3fkr_A 106 MVMAMPPYH 114 (309)
T ss_dssp EEEECCSCB
T ss_pred EEEEcCCCC
Confidence 999998765
No 494
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=93.29 E-value=0.16 Score=45.79 Aligned_cols=86 Identities=14% Similarity=0.108 Sum_probs=59.1
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcC-CHHHHHHHHHhc--CCcEE-EeCCCCCHHHHHHH--HHhcCCc
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPA-KWGEIADIVAAL--SIPVI-ANGDVFEYDDFQRI--KTAAGAS 227 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~-~~~~i~~i~~~~--~iPVi-~nGgI~s~~d~~~~--l~~~Gad 227 (326)
.|.+...++++.+.+.|+++|.+.|-|.+...-... ..+.++.+.+.+ ++||| +.|+..+.+.++.. .+..|||
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gad 97 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGAD 97 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCC
Confidence 456778899999999999999999888775433222 234455555544 58987 55666555544322 2468999
Q ss_pred EEEeccchhcCc
Q 020428 228 SVMAARGALWNA 239 (326)
Q Consensus 228 ~VmiGr~~l~~P 239 (326)
+||+-...+..|
T Consensus 98 avlv~~P~y~~~ 109 (292)
T 2vc6_A 98 GVLIVSPYYNKP 109 (292)
T ss_dssp EEEEECCCSSCC
T ss_pred EEEEcCCCCCCC
Confidence 999998877655
No 495
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=93.23 E-value=0.61 Score=44.22 Aligned_cols=168 Identities=7% Similarity=-0.007 Sum_probs=0.0
Q ss_pred eeecccCCCCcEEEEECCCC-----------HHHHHHHHHHhhc--CCC----EEEEccCCCc-----------------
Q 020428 67 VFRTCHQERNHVVFQMGTSD-----------AVRALTAAKMVCK--DVA----AIDINMGCPK----------------- 112 (326)
Q Consensus 67 ~~~~~~~~~~p~~vQl~g~~-----------~~~~~~aa~~~~~--~~d----~idlN~gcP~----------------- 112 (326)
+++...+.+.|+++|+..+. ++.+...++.+.+ +++ .+-+.=|-|.
T Consensus 30 il~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~~am~~a~e~ 109 (420)
T 2fiq_A 30 ALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVDAAMEKSVEL 109 (420)
T ss_dssp HHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchhhhhhhHHHH
Q ss_pred ---------ccccccccc------ccccCChHH--HHHHHHHHhhc------------ccCc--------EEEEecCCCC
Q 020428 113 ---------SFSVSGGMG------AALLSKPEL--IHDILTMLKRN------------LDVP--------VTCKIRLLKS 155 (326)
Q Consensus 113 ---------~~~~~~~~G------~~l~~~p~~--~~~iv~~v~~~------------~~~p--------v~vK~r~g~~ 155 (326)
.++-=|+.- -.+..+-.. ..++++...+. .+.- ....-....+
T Consensus 110 i~~aI~aGFtSVMiD~S~~~~~~~~pl~eNi~~~rt~elv~~Ah~~~~~~~eaElG~vgG~Ev~v~~~~~~~~~~~~~T~ 189 (420)
T 2fiq_A 110 VKAYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQREQLSYVIGTEVPVPGGEASAIQSVHITH 189 (420)
T ss_dssp HHHHHHTTCCEEEECCCSCCBTCCSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECSSCC----------CCCCC
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHcccCCcccceEEeeeecCCCCCcccccCCCCCCC
Q ss_pred hHHHHHHHH----HHHHcCCcE-------EEEeecccCCCCCCcC-CHHHHHHHHHhcCCc-EEE---eCCCCCHHHHHH
Q 020428 156 SQDTVELAR----RIEKTGVSA-------LAVHGRKVADRPRDPA-KWGEIADIVAALSIP-VIA---NGDVFEYDDFQR 219 (326)
Q Consensus 156 ~~~~~e~a~----~l~~~G~d~-------i~vh~r~~~~~~~~~~-~~~~i~~i~~~~~iP-Vi~---nGgI~s~~d~~~ 219 (326)
++++.++++ .+.+.|+|. |.|.-.|.-+.|..+. |++.+++|++.+++| ++. +|+=.+.+++.+
T Consensus 190 PeeA~~Fve~~~~~~~~tGvd~~~~~vi~LAV~iGt~HG~y~~~~ld~e~l~~I~~~v~~P~LVle~HGgSg~~~e~l~~ 269 (420)
T 2fiq_A 190 VEDAANTLRTHQKAFIARGLTEALTRVIAIVVQPGVEFDHSNIIHYQPQEAQALAQWIENTRMVYEAHSTDYQTRTAYWE 269 (420)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHTEEEEECCCSCEECSSCEECCCGGGGHHHHHHHTTSSCEEEESCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCcccccceEEEEeCCccCCCCCCCCcCHHHHHHHHHhcCCCCEEEecCCCCCCCHHHHHH
Q ss_pred HHHhcCCcEEEeccch
Q 020428 220 IKTAAGASSVMAARGA 235 (326)
Q Consensus 220 ~l~~~Gad~VmiGr~~ 235 (326)
++ ..|..-+=||+.+
T Consensus 270 ~v-~~Gi~kiNV~t~l 284 (420)
T 2fiq_A 270 LV-RDHFAILKVGPAL 284 (420)
T ss_dssp HH-HTTEEEEEECHHH
T ss_pred HH-HcCCCEEEECHHH
No 496
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=93.22 E-value=2.1 Score=37.92 Aligned_cols=137 Identities=9% Similarity=0.136 Sum_probs=89.6
Q ss_pred cEEEE-ECC-CCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCC
Q 020428 77 HVVFQ-MGT-SDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLL 153 (326)
Q Consensus 77 p~~vQ-l~g-~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g 153 (326)
++++. .+. .+++...+.++.+++ |++.|-...--|... .||-.=+ .+.-.+++.++.+..++|+..-+
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~fkprts----~~~~~g~--~~egl~~l~~~~~~~Gl~~~te~--- 94 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGAFKPRTS----PYSFQGY--GEKALRWMREAADEYGLVTVTEV--- 94 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSS----TTSCCCC--THHHHHHHHHHHHHHTCEEEEEC---
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEecccCCC----cccccCc--cHHHHHHHHHHHHHcCCcEEEee---
Confidence 55544 322 367888888888877 888887665444322 1111101 13334555666677799988766
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEEeCCCC-CHHHHHHHH---HhcCC-cE
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIANGDVF-EYDDFQRIK---TAAGA-SS 228 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~nGgI~-s~~d~~~~l---~~~Ga-d~ 228 (326)
+++.. +..+.+. +|++-|-+|+.. +.++++++.+ ++.||+..-|.. |++++.... ...|. +.
T Consensus 95 ~d~~~----~~~l~~~-vd~~kIga~~~~-------n~~ll~~~a~-~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i 161 (262)
T 1zco_A 95 MDTRH----VELVAKY-SDILQIGARNSQ-------NFELLKEVGK-VENPVLLKRGMGNTIQELLYSAEYIMAQGNENV 161 (262)
T ss_dssp CCGGG----HHHHHHH-CSEEEECGGGTT-------CHHHHHHHTT-SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred CCHHh----HHHHHhh-CCEEEECccccc-------CHHHHHHHHh-cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeE
Confidence 44433 4555666 999999988655 5678888876 799999998887 998887665 34565 55
Q ss_pred EEeccch
Q 020428 229 VMAARGA 235 (326)
Q Consensus 229 VmiGr~~ 235 (326)
+.+=||.
T Consensus 162 ~L~~RG~ 168 (262)
T 1zco_A 162 ILCERGI 168 (262)
T ss_dssp EEEECCB
T ss_pred EEEECCC
Confidence 5556664
No 497
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=93.21 E-value=1.1 Score=40.34 Aligned_cols=91 Identities=15% Similarity=0.204 Sum_probs=58.5
Q ss_pred ECCCCHHHHHHHHHHhhc-CCCEEEEcc-CCCccccccccccccccCChHHHHHHHHHHhhcccCcEEEEecCCC-ChHH
Q 020428 82 MGTSDAVRALTAAKMVCK-DVAAIDINM-GCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPVTCKIRLLK-SSQD 158 (326)
Q Consensus 82 l~g~~~~~~~~aa~~~~~-~~d~idlN~-gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~-~~~~ 158 (326)
+...|+-. |+++.+ |++.|=+.- ++-. .-|+-....-..+.+...++.|...++.||++-+-.|+ +..+
T Consensus 24 ~~a~D~~s----A~~~~~aG~~ai~vsg~~~a~----~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg~~~~ 95 (295)
T 1s2w_A 24 MEAHNGLS----ARIVQEAGFKGIWGSGLSVSA----QLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYGNFNN 95 (295)
T ss_dssp EEECSHHH----HHHHHHHTCSCEEECCHHHHH----TC---------CHHHHHHHHHHHHTCSSCEEEECCSSCSSHHH
T ss_pred ecCCCHHH----HHHHHHcCCCEEEeChHHHHH----hCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCCCHHH
Confidence 45566433 334444 888887752 1111 01222222334556777788888888999999998874 4667
Q ss_pred HHHHHHHHHHcCCcEEEEeecc
Q 020428 159 TVELARRIEKTGVSALAVHGRK 180 (326)
Q Consensus 159 ~~e~a~~l~~~G~d~i~vh~r~ 180 (326)
..+.++.+.++|+++|++-+..
T Consensus 96 v~~~v~~l~~aGaagv~iED~~ 117 (295)
T 1s2w_A 96 ARRLVRKLEDRGVAGACLEDKL 117 (295)
T ss_dssp HHHHHHHHHHTTCCEEEEECBC
T ss_pred HHHHHHHHHHcCCcEEEECCCC
Confidence 8888999999999999998764
No 498
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=93.20 E-value=0.33 Score=44.34 Aligned_cols=100 Identities=14% Similarity=0.250 Sum_probs=61.6
Q ss_pred CHHHHHHHHHH-hhcCCCEEEEccCCCcccccccccccc---ccCChHHHHHHHHHHhhcccCcEEEEecCCCChHHHHH
Q 020428 86 DAVRALTAAKM-VCKDVAAIDINMGCPKSFSVSGGMGAA---LLSKPELIHDILTMLKRNLDVPVTCKIRLLKSSQDTVE 161 (326)
Q Consensus 86 ~~~~~~~aa~~-~~~~~d~idlN~gcP~~~~~~~~~G~~---l~~~p~~~~~iv~~v~~~~~~pv~vK~r~g~~~~~~~e 161 (326)
+++...+.|+. +.+|+|.||||+-+-.| |+. .....+.+..+|+++++.+++|||+-+.- .+
T Consensus 31 ~~~~a~~~a~~~v~~GAdIIDIGgeSTrP-------Ga~~v~~~eE~~Rv~pvI~~l~~~~~vpiSIDT~~-------~~ 96 (314)
T 2vef_A 31 ALEQALQQARKLIAEGASMLDIGGESTRP-------GSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWK-------SQ 96 (314)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCC------------CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECSC-------HH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCcCCC-------CCCCCCHHHHHHHHHHHHHHHHhhCCceEEEeCCC-------HH
Confidence 45555554444 44599999998743222 221 12445567778888888789999997742 45
Q ss_pred HHHHHHHcCCcEEE-EeecccCCCCCCcCCHHHHHHHHHhcCCcEEEe
Q 020428 162 LARRIEKTGVSALA-VHGRKVADRPRDPAKWGEIADIVAALSIPVIAN 208 (326)
Q Consensus 162 ~a~~l~~~G~d~i~-vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~n 208 (326)
+++...++|++.|. |+|...+ + .+..+....+.|++..
T Consensus 97 Va~aAl~aGa~iINDVsg~~~d-----~----~m~~v~a~~~~~vvlm 135 (314)
T 2vef_A 97 VAEAALAAGADLVNDITGLMGD-----E----KMPHVVAEARAQVVIM 135 (314)
T ss_dssp HHHHHHHTTCCEEEETTTTCSC-----T----THHHHHHHHTCEEEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCC-----h----HHHHHHHHcCCCEEEE
Confidence 67777778998884 4443211 1 2334445568888874
No 499
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=93.20 E-value=1.9 Score=38.54 Aligned_cols=115 Identities=15% Similarity=0.200 Sum_probs=67.9
Q ss_pred CCcEEEEECCCCHHHHHHHHHHhhc-CCCEEEEccCCCccccccccccccccCChHHHHHHHHHHhhcccCcE-EEEecC
Q 020428 75 RNHVVFQMGTSDAVRALTAAKMVCK-DVAAIDINMGCPKSFSVSGGMGAALLSKPELIHDILTMLKRNLDVPV-TCKIRL 152 (326)
Q Consensus 75 ~~p~~vQl~g~~~~~~~~aa~~~~~-~~d~idlN~gcP~~~~~~~~~G~~l~~~p~~~~~iv~~v~~~~~~pv-~vK~r~ 152 (326)
+.|+ +-+...|. -.|+++.+ |+|.|=+ |--... ..-|+-..+.-..+.+...+++|+..++.|+ .+-+.-
T Consensus 33 g~~i-~~~tayDa----~sA~l~e~aG~d~ilv--GdSl~~-~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf 104 (281)
T 1oy0_A 33 GHKW-AMLTAYDY----STARIFDEAGIPVLLV--GDSAAN-VVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPF 104 (281)
T ss_dssp TCCE-EEEECCSH----HHHHHHHTTTCCEEEE--CTTHHH-HTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCT
T ss_pred CCcE-EEEeCcCH----HHHHHHHHcCCCEEEE--CHHHHH-HHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCC
Confidence 3344 34566663 34555655 8998833 322211 1223333444456677777888888777554 455544
Q ss_pred C---CChHHHHHH-HHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEE
Q 020428 153 L---KSSQDTVEL-ARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVI 206 (326)
Q Consensus 153 g---~~~~~~~e~-a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi 206 (326)
| .+++++.+- .+.++++|+++|.+-+.. ...+.|+.+.+. +|||+
T Consensus 105 gsy~~s~~~a~~na~rl~~eaGa~aVklEdg~--------e~~~~I~al~~a-gIpV~ 153 (281)
T 1oy0_A 105 GSYEAGPTAALAAATRFLKDGGAHAVKLEGGE--------RVAEQIACLTAA-GIPVM 153 (281)
T ss_dssp TSSTTCHHHHHHHHHHHHHTTCCSEEEEEBSG--------GGHHHHHHHHHH-TCCEE
T ss_pred CcccCCHHHHHHHHHHHHHHhCCeEEEECCcH--------HHHHHHHHHHHC-CCCEE
Confidence 3 246666664 455566999999998751 124556666553 79987
No 500
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=93.06 E-value=0.27 Score=45.48 Aligned_cols=85 Identities=19% Similarity=0.150 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHHHHcCCcEEEEeecccCCCCCCcCCHHHHHHHHHhcCCcEEE-eCCCCCHHHHHHH--HHhcCCcEEE
Q 020428 154 KSSQDTVELARRIEKTGVSALAVHGRKVADRPRDPAKWGEIADIVAALSIPVIA-NGDVFEYDDFQRI--KTAAGASSVM 230 (326)
Q Consensus 154 ~~~~~~~e~a~~l~~~G~d~i~vh~r~~~~~~~~~~~~~~i~~i~~~~~iPVi~-nGgI~s~~d~~~~--l~~~Gad~Vm 230 (326)
.|.+...++++.+.+.|+++|.+-|-|.+...........+-+..-.-++|||+ .|+..+.+.++.. .++.|||+||
T Consensus 44 ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavl 123 (344)
T 2hmc_A 44 PDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLM 123 (344)
T ss_dssp BCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 456678899999999999999999988775433222222222222223799875 4555554444322 2457999999
Q ss_pred eccchhcC
Q 020428 231 AARGALWN 238 (326)
Q Consensus 231 iGr~~l~~ 238 (326)
+-...+..
T Consensus 124 v~~P~y~~ 131 (344)
T 2hmc_A 124 VIPRVLSR 131 (344)
T ss_dssp ECCCCSSS
T ss_pred ECCCccCC
Confidence 99876655
Done!