Query 020431
Match_columns 326
No_of_seqs 201 out of 1991
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:45:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020431.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020431hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3c1m_A Probable aspartokinase; 100.0 5.2E-55 1.8E-59 433.6 29.8 300 15-326 96-408 (473)
2 3tvi_A Aspartokinase; structur 100.0 1.8E-54 6.1E-59 425.4 28.2 266 34-310 107-443 (446)
3 2cdq_A Aspartokinase; aspartat 100.0 9.7E-54 3.3E-58 426.4 31.0 296 14-326 113-424 (510)
4 2j0w_A Lysine-sensitive aspart 100.0 1.6E-52 5.5E-57 412.7 23.6 292 15-326 87-390 (449)
5 3ab4_A Aspartokinase; aspartat 100.0 9.1E-49 3.1E-53 383.8 30.6 283 30-326 60-348 (421)
6 3l76_A Aspartokinase; alloster 100.0 4.8E-49 1.6E-53 400.3 27.7 290 30-326 60-359 (600)
7 1ybd_A Uridylate kinase; alpha 99.9 7.9E-24 2.7E-28 191.8 15.9 160 33-216 71-239 (239)
8 2a1f_A Uridylate kinase; PYRH, 99.9 2.1E-23 7.3E-28 190.1 15.8 182 11-216 28-240 (247)
9 3ek6_A Uridylate kinase; UMPK 99.9 9.6E-23 3.3E-27 185.5 18.8 182 11-216 29-241 (243)
10 2jjx_A Uridylate kinase, UMP k 99.9 8.4E-23 2.9E-27 187.1 17.8 151 43-217 86-247 (255)
11 4a7w_A Uridylate kinase; trans 99.9 1.1E-22 3.8E-27 184.7 18.2 180 11-214 27-239 (240)
12 2j4j_A Uridylate kinase; trans 99.9 4.8E-23 1.6E-27 185.3 14.8 150 32-216 60-225 (226)
13 1z9d_A Uridylate kinase, UK, U 99.9 2.6E-22 8.7E-27 183.5 16.5 184 11-218 27-242 (252)
14 2ap9_A NAG kinase, acetylgluta 99.9 2.8E-22 9.4E-27 187.7 16.3 174 33-217 92-291 (299)
15 2j5v_A Glutamate 5-kinase; pro 99.9 8.9E-23 3.1E-27 195.9 12.9 193 11-218 23-259 (367)
16 3nwy_A Uridylate kinase; allos 99.9 1.7E-21 5.8E-26 180.4 18.5 181 11-215 69-280 (281)
17 3ll9_A Isopentenyl phosphate k 99.9 3.7E-22 1.3E-26 184.2 12.6 155 50-215 93-266 (269)
18 2ogx_A Molybdenum storage prot 99.9 1.1E-21 3.7E-26 181.7 13.1 161 33-217 98-272 (276)
19 2egx_A Putative acetylglutamat 99.9 3.9E-21 1.3E-25 177.3 15.4 170 33-214 68-268 (269)
20 2brx_A Uridylate kinase; UMP k 99.9 3.5E-21 1.2E-25 175.2 14.3 150 32-216 80-244 (244)
21 2va1_A Uridylate kinase; UMPK, 99.9 1.1E-20 3.9E-25 173.0 16.9 181 11-215 44-255 (256)
22 2ako_A Glutamate 5-kinase; str 99.8 1.5E-21 5.1E-26 178.2 9.2 161 34-207 63-232 (251)
23 3d40_A FOMA protein; fosfomyci 99.8 2.9E-21 1E-25 179.7 9.2 156 38-208 93-259 (286)
24 2rd5_A Acetylglutamate kinase- 99.8 3.8E-20 1.3E-24 173.1 15.1 162 40-216 112-298 (298)
25 2ij9_A Uridylate kinase; struc 99.8 4.5E-20 1.5E-24 165.0 14.8 146 32-214 58-218 (219)
26 1gs5_A Acetylglutamate kinase; 99.8 4.2E-20 1.4E-24 169.3 13.1 155 43-215 81-257 (258)
27 2v5h_A Acetylglutamate kinase; 99.8 1.2E-19 4E-24 171.5 14.7 170 33-217 116-311 (321)
28 2ogx_B Molybdenum storage prot 99.8 2.6E-19 9E-24 165.1 16.1 124 90-216 132-269 (270)
29 2bty_A Acetylglutamate kinase; 99.8 2.8E-19 9.5E-24 165.9 15.6 157 41-216 98-279 (282)
30 3ll5_A Gamma-glutamyl kinase r 99.8 5.2E-19 1.8E-23 161.3 12.1 145 45-207 83-232 (249)
31 2buf_A Acetylglutamate kinase; 99.8 3.6E-18 1.2E-22 159.9 16.0 167 33-217 93-297 (300)
32 3l86_A Acetylglutamate kinase; 99.8 1.1E-18 3.7E-23 161.5 11.8 148 49-216 117-278 (279)
33 1e19_A Carbamate kinase-like c 99.8 5.1E-18 1.7E-22 159.8 14.8 119 90-216 177-314 (314)
34 3k4o_A Isopentenyl phosphate k 99.7 1.1E-16 3.9E-21 147.2 13.7 146 49-217 101-265 (266)
35 2e9y_A Carbamate kinase; trans 99.7 4.1E-16 1.4E-20 146.9 15.4 119 90-216 177-315 (316)
36 3zzh_A Acetylglutamate kinase; 99.7 1.2E-15 4.2E-20 142.7 14.6 166 34-217 114-302 (307)
37 3d2m_A Putative acetylglutamat 99.6 1.7E-15 5.7E-20 149.3 13.4 157 42-217 119-304 (456)
38 4ab7_A Protein Arg5,6, mitocho 99.6 1.7E-14 5.9E-19 141.6 17.5 158 42-217 123-302 (464)
39 2we5_A Carbamate kinase 1; arg 99.6 3.5E-15 1.2E-19 140.2 11.6 119 90-215 173-309 (310)
40 3kzf_A Carbamate kinase; argin 99.6 1.5E-14 5.1E-19 134.9 11.9 122 90-216 179-316 (317)
41 3s6g_A N-acetylglutamate kinas 99.5 5E-14 1.7E-18 138.5 14.4 158 42-217 133-311 (460)
42 4go7_X Aspartokinase; transfer 99.5 2.6E-14 8.9E-19 125.8 8.4 126 181-308 46-180 (200)
43 3mah_A Aspartokinase; aspartat 99.5 6E-14 2E-18 119.0 7.3 120 183-307 33-152 (157)
44 2dtj_A Aspartokinase; protein- 99.4 5.2E-13 1.8E-17 115.5 11.6 127 181-309 26-161 (178)
45 3s1t_A Aspartokinase; ACT doma 99.4 2.2E-13 7.4E-18 118.3 7.9 125 180-307 26-160 (181)
46 3s6k_A Acetylglutamate kinase; 99.4 1E-13 3.5E-18 136.4 6.5 167 33-217 126-314 (467)
47 2dt9_A Aspartokinase; protein- 99.3 1.1E-12 3.7E-17 112.2 7.4 127 182-312 28-164 (167)
48 3c1m_A Probable aspartokinase; 99.3 1.3E-12 4.4E-17 129.3 9.0 122 184-306 334-469 (473)
49 2cdq_A Aspartokinase; aspartat 99.3 2E-12 6.9E-17 128.8 8.3 123 181-307 354-485 (510)
50 2re1_A Aspartokinase, alpha an 99.3 1.2E-11 4.3E-16 105.7 8.5 123 181-306 36-166 (167)
51 3mah_A Aspartokinase; aspartat 99.2 1.2E-11 4E-16 104.8 7.6 87 228-326 5-92 (157)
52 4axs_A Carbamate kinase; oxido 99.2 6.4E-11 2.2E-15 111.8 12.5 119 90-215 194-331 (332)
53 2dt9_A Aspartokinase; protein- 99.2 3.8E-11 1.3E-15 102.6 9.5 90 230-326 5-99 (167)
54 3s1t_A Aspartokinase; ACT doma 99.2 4.1E-11 1.4E-15 103.9 9.8 93 228-326 3-100 (181)
55 2j0w_A Lysine-sensitive aspart 99.2 1.1E-11 3.9E-16 121.7 6.3 116 185-305 325-448 (449)
56 3l76_A Aspartokinase; alloster 99.2 2.1E-11 7.3E-16 123.8 7.8 74 233-308 519-592 (600)
57 3ab4_A Aspartokinase; aspartat 99.1 5.7E-11 2E-15 115.9 8.1 123 183-307 277-408 (421)
58 4go7_X Aspartokinase; transfer 99.1 1.2E-10 4.2E-15 102.3 9.2 92 228-325 22-118 (200)
59 2re1_A Aspartokinase, alpha an 99.1 3.2E-10 1.1E-14 96.8 9.2 92 229-326 13-107 (167)
60 2dtj_A Aspartokinase; protein- 98.9 1.8E-09 6.1E-14 93.2 7.8 91 230-326 4-99 (178)
61 2f06_A Conserved hypothetical 98.0 1.3E-05 4.6E-10 65.9 7.3 109 186-303 21-131 (144)
62 3tvi_A Aspartokinase; structur 97.8 1.2E-05 4.2E-10 78.7 4.5 91 231-326 288-378 (446)
63 2f06_A Conserved hypothetical 96.5 0.0077 2.6E-07 49.1 7.9 50 251-302 13-64 (144)
64 1zhv_A Hypothetical protein AT 95.8 0.034 1.2E-06 45.2 8.0 66 235-303 56-121 (134)
65 1zvp_A Hypothetical protein VC 95.3 0.051 1.7E-06 44.1 7.3 64 236-302 66-129 (133)
66 1zpv_A ACT domain protein; str 92.7 0.59 2E-05 34.2 8.2 59 241-302 5-68 (91)
67 2f1f_A Acetolactate synthase i 90.7 0.21 7.2E-06 41.9 4.0 52 251-302 10-67 (164)
68 2pc6_A Probable acetolactate s 90.5 0.19 6.5E-06 42.2 3.6 52 251-302 11-68 (165)
69 1u8s_A Glycine cleavage system 88.6 1.2 4.2E-05 37.5 7.4 60 241-305 6-67 (192)
70 2ko1_A CTR148A, GTP pyrophosph 87.9 2.1 7.1E-05 30.7 7.4 57 242-301 6-67 (88)
71 2fgc_A Acetolactate synthase, 86.1 1.1 3.7E-05 38.5 5.5 52 251-302 36-93 (193)
72 2nyi_A Unknown protein; protei 85.1 2.6 8.7E-05 35.8 7.5 38 240-280 92-129 (195)
73 1y7p_A Hypothetical protein AF 79.4 2.5 8.4E-05 37.0 5.2 51 252-302 12-69 (223)
74 1u8s_A Glycine cleavage system 77.0 11 0.00037 31.5 8.6 38 240-280 92-129 (192)
75 3p96_A Phosphoserine phosphata 76.6 4.6 0.00016 38.0 6.8 38 241-281 12-49 (415)
76 3o1l_A Formyltetrahydrofolate 75.1 5.1 0.00017 36.7 6.3 36 241-279 22-57 (302)
77 2nyi_A Unknown protein; protei 74.3 5.2 0.00018 33.8 5.8 61 241-304 5-69 (195)
78 3n0v_A Formyltetrahydrofolate 71.5 7.5 0.00026 35.2 6.5 35 241-278 8-42 (286)
79 3kbq_A Protein TA0487; structu 70.7 17 0.00057 30.4 8.0 69 46-140 23-91 (172)
80 3lou_A Formyltetrahydrofolate 69.6 8.1 0.00028 35.1 6.3 36 240-278 9-44 (292)
81 3obi_A Formyltetrahydrofolate 69.0 6 0.0002 35.9 5.2 35 241-278 6-40 (288)
82 3nrb_A Formyltetrahydrofolate 67.5 16 0.00053 33.1 7.7 36 240-278 6-41 (287)
83 2jhe_A Transcription regulator 58.6 31 0.0011 27.6 7.4 41 252-293 8-48 (190)
84 1sc6_A PGDH, D-3-phosphoglycer 52.7 25 0.00085 33.3 6.6 60 240-302 330-393 (404)
85 3mtj_A Homoserine dehydrogenas 51.7 23 0.00079 34.1 6.2 52 251-302 366-425 (444)
86 3mwb_A Prephenate dehydratase; 45.9 1.1E+02 0.0039 27.8 9.6 125 160-302 127-269 (313)
87 2qmx_A Prephenate dehydratase; 43.3 1E+02 0.0036 27.6 8.8 132 160-302 120-267 (283)
88 1mkz_A Molybdenum cofactor bio 41.3 74 0.0025 26.0 7.1 70 45-138 27-96 (172)
89 2qmw_A PDT, prephenate dehydra 40.8 1.7E+02 0.0058 25.9 9.7 126 161-302 122-255 (267)
90 3iwt_A 178AA long hypothetical 39.4 88 0.003 25.4 7.3 68 46-137 40-107 (178)
91 2fts_A Gephyrin; gephyrin, neu 38.8 88 0.003 29.6 8.0 72 47-145 209-280 (419)
92 1y5e_A Molybdenum cofactor bio 37.6 93 0.0032 25.2 7.1 69 46-138 31-99 (169)
93 1ygy_A PGDH, D-3-phosphoglycer 36.5 63 0.0022 31.5 6.8 52 251-302 461-516 (529)
94 3s5j_B Ribose-phosphate pyroph 34.5 1.9E+02 0.0065 26.4 9.3 94 36-146 97-194 (326)
95 3ewi_A N-acylneuraminate cytid 34.0 70 0.0024 25.9 5.7 50 143-205 11-61 (168)
96 3rfq_A Pterin-4-alpha-carbinol 33.6 1.1E+02 0.0037 25.5 6.9 78 36-138 32-116 (185)
97 2pjk_A 178AA long hypothetical 33.2 1.2E+02 0.0041 24.9 7.1 68 47-138 41-108 (178)
98 3k5p_A D-3-phosphoglycerate de 31.1 86 0.0029 29.8 6.5 34 240-276 342-375 (416)
99 2is8_A Molybdopterin biosynthe 30.3 1E+02 0.0035 24.9 6.1 68 47-138 22-89 (164)
100 3m05_A Uncharacterized protein 27.6 1.8E+02 0.0062 22.3 6.7 50 255-304 15-69 (114)
101 1g8l_A Molybdopterin biosynthe 25.5 2.3E+02 0.0079 26.6 8.4 70 47-145 205-274 (411)
102 2g2c_A Putative molybdenum cof 23.2 1.4E+02 0.0049 24.0 5.7 67 47-138 26-96 (167)
103 1uz5_A MOEA protein, 402AA lon 22.9 1.9E+02 0.0066 27.1 7.3 70 47-145 208-277 (402)
104 1jlj_A Gephyrin; globular alph 20.9 3.2E+02 0.011 22.5 7.6 68 46-137 34-104 (189)
105 1uuy_A CNX1, molybdopterin bio 20.7 3.3E+02 0.011 21.7 7.6 67 48-138 27-98 (167)
106 1di6_A MOGA, molybdenum cofact 20.2 3.2E+02 0.011 22.7 7.4 69 47-137 24-92 (195)
No 1
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=100.00 E-value=5.2e-55 Score=433.59 Aligned_cols=300 Identities=38% Similarity=0.544 Sum_probs=272.5
Q ss_pred HHHHHHHHHHhhhc-----CCCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhH
Q 020431 15 FIRSTYNFLSNVDS-----GHATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESE 89 (326)
Q Consensus 15 ~i~~~~~~l~~~~~-----~~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~ 89 (326)
.|+..++.|++++. ++++++.+|+++|+||++|+++++.+|+++|++|+++++.++++++++.+|..+++.....
T Consensus 96 ~i~~~~~~l~~~l~~~~~~~~~~~~~~d~~~~~ge~~s~~l~~~~L~~~G~~a~~l~~~~~~i~t~~~~~~~~~~~~~~~ 175 (473)
T 3c1m_A 96 IIDSRIEELEKVLIGVAYLGELTPKSRDYILSFGERLSSPILSGAIRDLGEKSIALEGGEAGIITDNNFGSARVKRLEVK 175 (473)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECHHHHTEEECSCTTSCCEEEECHH
T ss_pred HHHHHHHHHHHHHHhhhhcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEchheeEEEccCCCCccccHhhhH
Confidence 67788888888754 5889999999999999999999999999999999999999996667667776555444566
Q ss_pred HHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeec
Q 020431 90 KRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLS 169 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls 169 (326)
+.++.+++ .+.|||++||+|.+++|.++|+||||||++|+.+|.+|+|+++++||||||||++||+.+|+|+++++++
T Consensus 176 ~~i~~ll~--~g~ipVv~G~~g~~~~g~~~~l~rg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dP~~~~~a~~i~~is 253 (473)
T 3c1m_A 176 ERLLPLLK--EGIIPVVTGFIGTTEEGYITTLGRGGSDYSAALIGYGLDADIIEIWTDVSGVYTTDPRLVPTARRIPKLS 253 (473)
T ss_dssp HHHHHHHH--TTCEEEEESSEEEETTSCEEECCTTTHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEE
T ss_pred HHHHHHHh--CCcEEEEeCCcccCCCCCEEEeCCCChHHHHHHHHHHcCCCEEEEeeCCCcceeCCCCCCCCCeEecccC
Confidence 88999988 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchhhccCCeeeEEeecCeEEEEEecC
Q 020431 170 YQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVEGT 249 (326)
Q Consensus 170 ~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~~~~~~v~~I~~~~~ia~IsivG~ 249 (326)
|+|+.+++++|+++|||+++++|.++|+|++|.|+++|+..||+|.+... . ....+++|+.++|+++|+++|.
T Consensus 254 ~~e~~~l~~~g~~~m~~~a~~~a~~~gi~v~I~~~~~~~~~GT~i~~~~~-~------~~~~v~gIa~~~~~a~Isv~g~ 326 (473)
T 3c1m_A 254 YIEAMELAYFGAKVLHPRTIEPAMEKGIPILVKNTFEPESEGTLITNDME-M------SDSIVKAISTIKNVALINIFGA 326 (473)
T ss_dssp HHHHHHHHHTTCTTSCGGGHHHHHHHTCCEEEEETTSTTSCCEEEESCCC-C------CTTSCCEEEEEEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHcCCEEEEEecCCCCCceEEEecccc-c------cccccchhhccCCeEEEEEecC
Confidence 99999999999999999999999999999999999999999999987531 1 2356899999999999999999
Q ss_pred CCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHH--------HHHhcCCCCcceEEEcC
Q 020431 250 GMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKF--------REALNAGRLSQVCLSFW 321 (326)
Q Consensus 250 ~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f--------~~~~~~~~~~~v~~~~~ 321 (326)
+|.+.+|+.+++|+.|+++||+|+||+|++|+.+|||+|++++.+++++.||++| ..++ .++++.++.+
T Consensus 327 ~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~~Is~~V~~~d~~~a~~~L~~~l~~~~~~~~~~~~---~~~~v~~~~~ 403 (473)
T 3c1m_A 327 GMVGVSGTAARIFKALGEEEVNVILISQGSSETNISLVVSEEDVDKALKALKREFGDFGKKSFLNNN---LIRDVSVDKD 403 (473)
T ss_dssp SSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTCCEEEEEEGGGHHHHHHHHHHHHCC----CTTSCC---CEEEEEEEEE
T ss_pred CCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEechHHHHHHHHHHHHHhhhccccccccc---ccceEEEeCC
Confidence 9999999999999999999999999999999999999999999999999999887 2222 3568999999
Q ss_pred eeecC
Q 020431 322 LCDYT 326 (326)
Q Consensus 322 ~~~~~ 326 (326)
+|+++
T Consensus 404 ~a~vs 408 (473)
T 3c1m_A 404 VCVIS 408 (473)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99873
No 2
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.8e-54 Score=425.36 Aligned_cols=266 Identities=31% Similarity=0.443 Sum_probs=229.7
Q ss_pred hHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccC
Q 020431 34 SFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAST 113 (326)
Q Consensus 34 ~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~ 113 (326)
+..|+++|+||+||+++|+.+| ++.+++++++++++++ . .++...+.++++++++ .+.|||++||+|.+
T Consensus 107 ~~~D~lls~GE~lS~~lla~~l-----~a~~~~~~~~~~~~~~---~-~~~~~~~~~~l~~~l~--~~~v~Vv~Gf~g~~ 175 (446)
T 3tvi_A 107 ASSDYAASRGEYLNGVILAKYL-----NAEFIDAAEVIFFDKS---G-CFDEKKSYEKIKEKVL--SCNKAVIPGFYGSS 175 (446)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHH-----TCEECCGGGTCBBCC------CBCHHHHHHHHHHHTT--TCSSEECCCSEEEC
T ss_pred ccHHHHHHhHHHHHHHHHHHHh-----cceeECHHHheeeCCC---C-ceehHhhHHHHHHHHh--cCCeEEeeCceecC
Confidence 7789999999999999999996 5999999999887762 2 2456667789999997 89999999999999
Q ss_pred CCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHH
Q 020431 114 PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVM 193 (326)
Q Consensus 114 ~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~ 193 (326)
++|.++|+||||||++|+++|.+++|+++++||||||||++|||++|+|++++++||+|+.+|+++|+++|||+|+++|+
T Consensus 176 ~~g~~~tl~rGgsD~~Aa~lA~~l~A~~~~i~TDVdGvyt~dP~~~~~a~~i~~is~~e~~ela~~Ga~vl~~~a~~~a~ 255 (446)
T 3tvi_A 176 FNGDVKTFSRGGSDVTGSIISAGVNADLYENWTDVSGFLMADPRIVENPKTISKISYKELRELSYMGATVLHEEAIFPVK 255 (446)
T ss_dssp TTSCEEECSSSTTHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHTTTC----CCSTTTHHHH
T ss_pred CCCCeEEEccCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCcCCCCeEcceeCHHHHHHHHhCCCCcchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCEEEEeccCCCCCceEEeCCCCC----------------------CCcc---------------------------
Q 020431 194 RYDIPIVIRNIFNLSVPGIMICRPPVD----------------------ENED--------------------------- 224 (326)
Q Consensus 194 ~~~I~v~I~n~~~~~~~GT~I~~~~~~----------------------~~~~--------------------------- 224 (326)
++|||++|+|+++|+.+||+|.+.... ...|
T Consensus 256 ~~~ipi~i~~~~~p~~~GT~i~~~~~~~~~~~~v~gIa~~~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~~ 335 (446)
T 3tvi_A 256 DSGIPINIKNTNKPSDPGTLILSDTHKEINLGTITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPSG 335 (446)
T ss_dssp HSSCCEEEEETTBTTSCCEEEECTTTSCCCTTCCCEEEEEEEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCEE
T ss_pred HcCCeEEEecCCCCCCCCEEEecCCcccccCcceEEEEecCCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEecC
Confidence 999999999999999999999754210 0000
Q ss_pred -------h--hhcc-------------CCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCcc
Q 020431 225 -------E--QIID-------------SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEH 282 (326)
Q Consensus 225 -------~--~~~~-------------~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~ 282 (326)
. .... -....+.+.+++++|++||.+|++.||+++++|++|+++||||.||+|++|+.
T Consensus 336 ~~~is~~V~~~d~~~~~~~~~~el~~~~~~~~v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtSei 415 (446)
T 3tvi_A 336 VDSVSLVIEDCKLDGKCDKIIEEIKKQCNPDSIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSSEI 415 (446)
T ss_dssp TTEEEEEEEHHHHTTTHHHHHHHHHHHSCCSEEEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSCTT
T ss_pred CCEEEEEEecchHHHHHHHHHHHHHHhcCCCcEEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCCCc
Confidence 0 0000 01235888899999999999999999999999999999999999999999999
Q ss_pred EEEEEEccccHHHHHHHHHHHHHHHhcC
Q 020431 283 SVCFAVPEKEVKAVAEALESKFREALNA 310 (326)
Q Consensus 283 sIs~~V~~~d~~~av~~Lh~~f~~~~~~ 310 (326)
+|||+|+++|.++|+++||++||..--+
T Consensus 416 ~Is~vV~~~d~~~Av~aLH~~ff~~~~~ 443 (446)
T 3tvi_A 416 NVIVGVETVDFEKAVKSIYNAFNEGHHH 443 (446)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHC-----
T ss_pred eEEEEEcHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999876543
No 3
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=100.00 E-value=9.7e-54 Score=426.41 Aligned_cols=296 Identities=26% Similarity=0.422 Sum_probs=256.6
Q ss_pred HHHHHHHHHHHhhhc-----CCCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCC---c
Q 020431 14 EFIRSTYNFLSNVDS-----GHATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPD---F 85 (326)
Q Consensus 14 ~~i~~~~~~l~~~~~-----~~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~---~ 85 (326)
+.|+..++.|++++. ++++++.+|+++|+||++|+.+++.+|+++|++|++++++++++++++.++..+++ +
T Consensus 113 ~~i~~~~~~l~~~l~~~~~~~~~~~r~~d~l~s~GE~~s~~ll~~~L~~~Gi~A~~l~~~~~~l~t~~~~~~~~i~~~~~ 192 (510)
T 2cdq_A 113 SVILTYLEELEQLLKGIAMMKELTLRTRDYLVSFGECLSTRIFAAYLNTIGVKARQYDAFEIGFITTDDFTNGDILEATY 192 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECGGGTTCEECSCSTTCCBCTTHH
T ss_pred HHHHHHHHHHHHHHhhhhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEhhHeeEEEecCCCccchhhHHH
Confidence 356777788877643 57889999999999999999999999999999999999999966666666654443 2
Q ss_pred hhhHHHHHH-HhhcCCCcEEEecCccccCC-CCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCe
Q 020431 86 SESEKRLEK-WFSQSPSNTIIATGFIASTP-DNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAV 163 (326)
Q Consensus 86 ~~~~~~i~~-~l~~~~~~ipVv~Gfi~~~~-~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~ 163 (326)
...++.+.+ +++ .+.|||++||+|.++ +|.++|+||||||++|+++|.+|+|+++++||||||||++|||++|+|+
T Consensus 193 ~~~~~~l~~~Ll~--~g~IpVv~Gf~g~~~~~g~ittlgrGgsD~tAa~lA~~l~Ad~l~i~TDVdGVytaDPr~v~~A~ 270 (510)
T 2cdq_A 193 PAVAKRLYDDWMH--DPAVPIVTGFLGKGWKTGAVTTLGRGGSDLTATTIGKALGLKEIQVWKDVDGVLTCDPTIYKRAT 270 (510)
T ss_dssp HHHHHHHHHHHHH--SCCEEEEESSEEEETTTCCEEECCTTHHHHHHHHHHHHHTCSEEEEEESSSSSBSSCTTTCTTCC
T ss_pred HHHHHHHHHHHHh--CCcEEEEeCccccCCCCCceEEeCCCChHHHHHHHHHHcCCCEEEEEeCCCCcCCCCCCCCCCCE
Confidence 223455654 556 789999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred EEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchhhccCCeeeEEeecCeEE
Q 020431 164 ILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLAL 243 (326)
Q Consensus 164 ~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~~~~~~v~~I~~~~~ia~ 243 (326)
++++++|+|+.+|+++|+++|||+|+++|.++|||++|+|+++|+.+||+|.+... . ....+++|+.++|+++
T Consensus 271 ~I~~Is~~E~~ela~~Ga~vmh~~a~~~a~~~gIpv~I~n~~~p~~~GT~I~~~~~-~------~~~~v~gIa~~~~~~~ 343 (510)
T 2cdq_A 271 PVPYLTFDEAAELAYFGAQVLHPQSMRPAREGEIPVRVKNSYNPKAPGTIITKTRD-M------TKSILTSIVLKRNVTM 343 (510)
T ss_dssp BCCEEEHHHHHHHHHHHSSCCCHHHHHHHHHHTCCEEEEETTSTTSCCEEEESCCC-C------TTCCEEEEEEEEEEEE
T ss_pred EecEeCHHHHHHHHhcCcchhHHHHHHHHHHCCCeEEEEccCcCCCCCeEEecccc-c------cccccccccccCCeEE
Confidence 99999999999999999999999999999999999999999999999999987532 1 2346999999999999
Q ss_pred EEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccH------HHHHHHHHHHHHHHhcCCCCcceE
Q 020431 244 VNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEV------KAVAEALESKFREALNAGRLSQVC 317 (326)
Q Consensus 244 IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~------~~av~~Lh~~f~~~~~~~~~~~v~ 317 (326)
|+|.|.+|.+.+|+.+++|+.|+++||+|+||+| |+.+|||+|++++. .+.++.+.++ + ..+++++
T Consensus 344 I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~s--se~sis~~v~~~~~~~~~~~~~~l~~~~~e----l--~~~~~v~ 415 (510)
T 2cdq_A 344 LDIASTRMLGQVGFLAKVFSIFEELGISVDVVAT--SEVSISLTLDPSKLWSRELIQQELDHVVEE----L--EKIAVVN 415 (510)
T ss_dssp EEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEE--ETTEEEEEECCGGGSSSCCCHHHHHHHHHH----H--TTTSEEE
T ss_pred EEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEe--CCCeEEEEEechHhhhhhHHHHHHHHHHHH----h--CCCCeEE
Confidence 9999999999999999999999999999999984 69999999998764 3344444333 2 2267899
Q ss_pred EEcCeeecC
Q 020431 318 LSFWLCDYT 326 (326)
Q Consensus 318 ~~~~~~~~~ 326 (326)
++.++|+|+
T Consensus 416 ~~~~~a~Vs 424 (510)
T 2cdq_A 416 LLKGRAIIS 424 (510)
T ss_dssp EEEEEEEEE
T ss_pred EeCCcEEEE
Confidence 999999874
No 4
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=100.00 E-value=1.6e-52 Score=412.69 Aligned_cols=292 Identities=28% Similarity=0.475 Sum_probs=248.2
Q ss_pred HHHHHHHHHHhhhc---CCCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHH-
Q 020431 15 FIRSTYNFLSNVDS---GHATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEK- 90 (326)
Q Consensus 15 ~i~~~~~~l~~~~~---~~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~- 90 (326)
.++..++.|..+.. -..+++.+|+++|+||++|+.+++.+|+++|+++++++++++ +.+++.++..+++...+.+
T Consensus 87 ~i~~~~~~l~~l~~~~~~~~~~~~~d~l~s~Ge~~s~~l~~~~L~~~Gi~a~~l~~~~~-l~t~~~~~~~~~~~~~~~~~ 165 (449)
T 2j0w_A 87 EIERLLENITVLAEAAALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKV-MRTNDRFGRAEPDIAALAEL 165 (449)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEECCGGGT-CBBCSCTTSCCBCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEchHHh-eeecCCCCCccccHhHhHHH
Confidence 35555666633221 123589999999999999999999999999999999999999 5566667766666544333
Q ss_pred ---HHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEee
Q 020431 91 ---RLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRT 167 (326)
Q Consensus 91 ---~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ 167 (326)
.++.+++ +.|||++||+|.+++|.++|+||||||++|+++|.+|+|+++++||||||||++|||++|+|+++++
T Consensus 166 ~~~~l~~l~~---~~IpVv~Gf~g~~~~g~~ttl~rGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~DPr~~~~a~~i~~ 242 (449)
T 2j0w_A 166 AALQLLPRLN---EGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVDIWTDVPGIYTTDPRVVSAAKRIDE 242 (449)
T ss_dssp HHHHTHHHHH---HSEEEEESSEEECTTSCEEECCTTHHHHHHHHHHHHTTCSEEEEEESSSSEESSCTTTCTTCCEESE
T ss_pred HHHHHHHHhc---CCEEEEeCCeeeCCCCCEEEeCCCChHHHHHHHHHHCCCCEEEEccccCCcCcCCCCCCCCCEEccC
Confidence 3444443 3499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchhhccCCeeeEEeecCeEEEEEe
Q 020431 168 LSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVE 247 (326)
Q Consensus 168 ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~~~~~~v~~I~~~~~ia~Isiv 247 (326)
++|+|+.+++++|+|+|||+|+++|.++|+|++|+|+++|+.+||+|.+... ....+++|+.++|+++|++.
T Consensus 243 is~~e~~ela~~G~kvlh~~a~~~a~~~gi~v~I~~~~~p~~~GT~I~~~~~--------~~~~v~gIa~~~~~~~i~i~ 314 (449)
T 2j0w_A 243 IAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTE--------NPPLFRALALRRNQTLLTLH 314 (449)
T ss_dssp EEHHHHHHHHHTTCTTSCTTTHHHHHHHTCCEEEEESSCTTSCCEEEESCCS--------SCCSEEEEEEEEEEEEEEEC
T ss_pred ccHHHHHHHHhcCCccchHHHHHHHHHCCCeEEEEECCCCCCCeeEEecccc--------cccccccceeeCCEEEEEEE
Confidence 9999999999999999999999999999999999999999999999987531 23569999999999999999
Q ss_pred cCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccH-----HHHHHHHHHHHHHHhcCCCCcceEEEcCe
Q 020431 248 GTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEV-----KAVAEALESKFREALNAGRLSQVCLSFWL 322 (326)
Q Consensus 248 G~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~-----~~av~~Lh~~f~~~~~~~~~~~v~~~~~~ 322 (326)
|.+|.+.+|+.+++|+.|++++|+|+||+| |+.+|||+|++++. .++++.+..++.. +++++++.++
T Consensus 315 ~~~m~~~~g~~~~if~~l~~~~i~vd~i~s--s~~sis~~v~~~~~~~~~~~~~~~~~~~el~~------~~~v~~~~~~ 386 (449)
T 2j0w_A 315 SLNMLHSRGFLAEVFGILARHNISVDLITT--SEVSVALTLDTTGSTSTGDTLLTQSLLMELSA------LCRVEVEEGL 386 (449)
T ss_dssp CCSCSCHHHHHHHHTTTTTTTTCCCSEEEE--ETTEEEEEECCCCCSSTTCCSSCHHHHHHHHH------HSCEEEEEEE
T ss_pred ecCCCCccCHHHHHHHHHHHcCCCEEEEEe--CCCeEEEEEeccccchhhHHHHHHHHHHHhcc------CCeEEEeCCe
Confidence 999999999999999999999999999995 58999999998653 2234444443321 5679999999
Q ss_pred eecC
Q 020431 323 CDYT 326 (326)
Q Consensus 323 ~~~~ 326 (326)
|+|+
T Consensus 387 a~vs 390 (449)
T 2j0w_A 387 ALVA 390 (449)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9874
No 5
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=100.00 E-value=9.1e-49 Score=383.83 Aligned_cols=283 Identities=25% Similarity=0.360 Sum_probs=222.5
Q ss_pred CCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCc
Q 020431 30 HATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGF 109 (326)
Q Consensus 30 ~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gf 109 (326)
..+++..|.++|+||++++.+++.+|+++|+++.++++.++.+.+++.++..++... ..+.++++++ .+.|||++||
T Consensus 60 ~~~~~~~d~~~a~Ge~~~~~ll~~~L~~~G~~a~~l~~~~~~~~t~~~~~~~~v~~~-~~~~i~~~l~--~g~ipVv~g~ 136 (421)
T 3ab4_A 60 VPPAREMDMLLTAGERISNALVAMAIESLGAEAQSFTGSQAGVLTTERHGNARIVDV-TPGRVREALD--EGKICIVAGF 136 (421)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEECCCC-----------------C-CHHHHHHHHH--TTCEEEC---
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEehhhceEEeccCCCCeeechh-hHHHHHHHHh--CCCEEEEeCC
Confidence 446788999999999999999999999999999999999986666655544333221 2278888888 8999999999
Q ss_pred cccCCC-CCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhh
Q 020431 110 IASTPD-NIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRT 188 (326)
Q Consensus 110 i~~~~~-g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a 188 (326)
+|.+++ |.++|+||||||++|+.+|.+|+|+++++||||||||++|||.+|++++++++||+|+.+|++.|++++||+|
T Consensus 137 ~g~~~~~g~~~tlgrg~sD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~el~~~Ga~v~~~~a 216 (421)
T 3ab4_A 137 QGVNKETRDVTTLGRGGSDTTAVALAAALNADVCEIYSDVDGVYTADPRIVPNAQKLEKLSFEEMLELAAVGSKILVLRS 216 (421)
T ss_dssp ---------------CCHHHHHHHHHHHHTCSEEEEEESCCSCBSSCTTTSTTCCBCSEECHHHHHHHHHTTCCSSCHHH
T ss_pred cCcCCCCCceEEeCCCCHHHHHHHHHHHCCCCEEEEEECCCccCcCCCCCCCCCeEccccCHHHHHHHHhcCCcCchHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchhhccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhC
Q 020431 189 IIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDV 268 (326)
Q Consensus 189 ~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~~~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~ 268 (326)
+++|.++|||++|+|+++| ..||+|.++.... + .+...+++++.++|+++|++.| +.+.+|+++++|+.|+++
T Consensus 217 ~~~a~~~gi~v~I~n~~~~-~~GT~I~~~~~~~--~--~~~~~i~~i~~~~~~~~i~v~~--~~~~~g~~~~If~~La~~ 289 (421)
T 3ab4_A 217 VEYARAFNVPLRVRSSYSN-DPGTLIAGSMEDI--P--VEEAVLTGVATDKSEAKVTVLG--ISDKPGEAAKVFRALADA 289 (421)
T ss_dssp HHHHHHTTCCEEEEESSSC-CCCEEECSCGGGS--C--TTTCCCCEEEEECSEEEEEEEE--EESSTTHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEecCcCC-CCCeEEEecCccc--c--cccCccceEEeeCCEEEEEEec--cCCcccHHHHHHHHHHHc
Confidence 9999999999999999998 6899998741100 0 1234699999999999999998 778899999999999999
Q ss_pred CCcEEEEEecCCc-----cEEEEEEccccHHHHHHHHHHHHHHHhcCCCCcceEEEcCeeecC
Q 020431 269 GANVIMISQASSE-----HSVCFAVPEKEVKAVAEALESKFREALNAGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 269 ~I~v~~Isq~~se-----~sIs~~V~~~d~~~av~~Lh~~f~~~~~~~~~~~v~~~~~~~~~~ 326 (326)
||+|+||+|++|+ .+|+|+|++++.+++.+.|++ +..++. ++++.++.++|+++
T Consensus 290 ~I~vd~I~q~~s~~~~g~~~isf~v~~~~~~~a~~~l~~-~~~~~~---~~~v~~~~~~a~vs 348 (421)
T 3ab4_A 290 EINIDMVLQNVFSVEDGTTDITFTCPRSDGRRAMEILKK-LQVQGN---WTNVLYDDQVGKVS 348 (421)
T ss_dssp TCCCEEEEECCCC--CCEEEEEEEEETTTHHHHHHHHHH-HHTTTT---CSEEEEECCEEEEE
T ss_pred CCcEEEEEccCccccCCcceEEEEEechhHHHHHHHHHH-HHHHcC---CceEEEeCCeEEEE
Confidence 9999999997774 799999999999999888876 544443 56899999999873
No 6
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=100.00 E-value=4.8e-49 Score=400.32 Aligned_cols=290 Identities=24% Similarity=0.374 Sum_probs=245.5
Q ss_pred CCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCc
Q 020431 30 HATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGF 109 (326)
Q Consensus 30 ~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gf 109 (326)
..+++..|+++++||++|+.+++.+|+++|+++++++++++++++++.+++.++..... +.++++++ .+.|||++||
T Consensus 60 ~~~~~~~d~l~s~Ge~~s~~l~~~~l~~~G~~a~~l~~~~~~l~~~~~~~~~~~~~~~~-~~i~~ll~--~g~IpVv~Gf 136 (600)
T 3l76_A 60 NPCRREMDMLLSTGEQVSIALLSLALQEIDQPAISLTGAQVGIVTEAEHSRARILEIRP-DRLEHHLR--EGKVVVVAGF 136 (600)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGTEEEEC-------CCEEEE-CCHHHHHT--TTCEEEEECE
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHhCCCCeEEechhHcceEEecCCCCceeccccH-HHHHHHHh--CCCEEEEECC
Confidence 45688899999999999999999999999999999999999888776665543332111 67888887 8999999999
Q ss_pred cccCCCC--CcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchh
Q 020431 110 IASTPDN--IPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPR 187 (326)
Q Consensus 110 i~~~~~g--~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~ 187 (326)
+|.+++| .++++||||||++|+++|.+|+|+++++||||||||++|||++|+|+++++++|+|+.+|+++|+++|||+
T Consensus 137 ~g~~~~g~~~~~tlgrGgsD~~Aa~lA~~l~Ad~l~i~TDVdGv~~~dPr~~~~a~~i~~is~~e~~ela~~G~~vm~p~ 216 (600)
T 3l76_A 137 QGISSVEHLEITTLGRGGSDTSAVALAAALKADFCEIYTDVPGILTTDPRLVPEAQLMAEITCDEMLELASLGAKVLHPR 216 (600)
T ss_dssp EEC----CEEEECCCTTHHHHHHHHHHHHHTCSEEEEEESSSSCBSSCTTTCTTCCBCSEEEHHHHHHTGGGGTTTCCHH
T ss_pred eecCCCCCEEEecCCCCChHHHHHHHHHHcCCCEEEEEECCCcCCCCCCCCCCCCeEeeEEcHHHHHHHHhCCCCccHHH
Confidence 9999999 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCC-CcchhhccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHH
Q 020431 188 TIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDE-NEDEQIIDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVK 266 (326)
Q Consensus 188 a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~-~~~~~~~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~ 266 (326)
|+++|.++|||++|+|+++ +.+||+|.+..... ..........+++|+.++|+++|++. +|.+.+|+.+++|+.|+
T Consensus 217 a~~~a~~~gipv~I~n~~~-~~~GT~I~~~~~~~~~~~~~~~~~~v~gi~~~~~~~~i~i~--~~~~~~g~~~~if~~La 293 (600)
T 3l76_A 217 AVEIARNYGIPLVVRSSWS-DEPGTKVVAPPVQNRSLVGLEIAKAVDGVEYDADQAKVALL--RVPDRPGVASKLFRDIA 293 (600)
T ss_dssp HHHHHHHHTCCEEEEETTC-CSCCEEEECCCCCSCCCCCCBSSCSCCEEEEECCCEEEEEE--EEECSTTHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECCC-CCCCeEEecCCccccccccccccCcceEEEeeCCEEEEEEe--CCCCcccHHHHHHHHHH
Confidence 9999999999999999998 46899998753210 00000134679999999999999998 58899999999999999
Q ss_pred hCCCcEEEEEecCCc---cEEEEEEccccHHHHHHHHHHHHHHHhc----CCCCcceEEEcCeeecC
Q 020431 267 DVGANVIMISQASSE---HSVCFAVPEKEVKAVAEALESKFREALN----AGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 267 ~~~I~v~~Isq~~se---~sIs~~V~~~d~~~av~~Lh~~f~~~~~----~~~~~~v~~~~~~~~~~ 326 (326)
+++|+|+||+|+.++ .+|+|++++++..++.+.|++ +..++. +..++++.++.++|+|+
T Consensus 294 ~~~I~Vd~I~qs~~~~~~~~Isftv~~~~~~~a~~~l~~-~~~el~~~~~~~~~~~v~~~~~~a~Vs 359 (600)
T 3l76_A 294 QQQVDIDLIIQSIHDGNSNDIAFTVVKDLLNTAEAVTSA-IAPALRSYPEADQEAEIIVEKGIAKIA 359 (600)
T ss_dssp HTTCCCCCEEBCCCBTTEEEEEEEECGGGHHHHHHHHHH-HGGGGSSSTTCSSSSEEEEECSEEEEE
T ss_pred HcCCCEEEEEeeccCCCCceEEEEEeHHHHHHHHHHHHH-HHHHhhccccccCcceeEecCCeEEEE
Confidence 999999999997754 799999999999998888876 656663 34788999999999874
No 7
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=99.91 E-value=7.9e-24 Score=191.79 Aligned_cols=160 Identities=19% Similarity=0.254 Sum_probs=131.4
Q ss_pred hhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCcccc
Q 020431 33 ESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAS 112 (326)
Q Consensus 33 ~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~ 112 (326)
++..|.+.+.|++++++++..+|.++|+++.++++.+...+.+ ++.. .+.+ ++++ .|.|||++|+.+
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~l~~~G~~~~~~~~~~~~~~~~--------~~~~-~~~~-~ll~--~g~ipVv~g~~g- 137 (239)
T 1ybd_A 71 RATADYMGMMATVMNALALKDAFETLGIKARVQSALSMQQIAE--------TYAR-PKAI-QYLE--EGKVVIFAAGTG- 137 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESSCBSSSCE--------ECCH-HHHH-HHHH--TTCEEEEESTTS-
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeeccccccc--------chhH-HHHH-HHHh--CCcEEEEECCcc-
Confidence 3345567778899999999999999999999999877643322 1111 1334 6777 899999997633
Q ss_pred CCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHH
Q 020431 113 TPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPV 192 (326)
Q Consensus 113 ~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a 192 (326)
. .++++|++|+.+|.+++|++++|||||||||++||+++|+|+++++++++|+.++ |.++|||+++.+|
T Consensus 138 ----~----~~~~~D~~Aa~lA~~l~Ad~liilTdVdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~~~m~~~a~~~a 206 (239)
T 1ybd_A 138 ----N----PFFTTDTAAALRGAEMNCDVMLKATNVDGVYTADPKKDPSATRYETITFDEALLK---NLKVMDATAFALC 206 (239)
T ss_dssp ----S----TTCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCGGGCTTCCBCSEEEHHHHHHT---TCCSSCHHHHHHH
T ss_pred ----C----CCCCcHHHHHHHHHhcCCCEEEEeeCCCccCCCCCCCCCCCeEccccCHHHHHHh---cccccCHHHHHHH
Confidence 1 2357899999999999999999999999999999999999999999999998774 7899999999999
Q ss_pred HhCCCCEEEEeccCCC---------CCceEEeC
Q 020431 193 MRYDIPIVIRNIFNLS---------VPGIMICR 216 (326)
Q Consensus 193 ~~~~I~v~I~n~~~~~---------~~GT~I~~ 216 (326)
.++|+|++|.|+++|+ ..||.|.+
T Consensus 207 ~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~i~~ 239 (239)
T 1ybd_A 207 RERKLNIVVFGIAKEGSLKRVITGEDEGTLVHC 239 (239)
T ss_dssp HHTTCCEEEECTTSTTHHHHHHHTCSCSEEEEC
T ss_pred HHcCCcEEEEeCCChhHHHHHHcCCCCCeEEcC
Confidence 9999999999997653 45888753
No 8
>2a1f_A Uridylate kinase; PYRH, structural genomics, PSI, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Haemophilus influenzae} SCOP: c.73.1.3 PDB: 2bne_A* 2bnf_A* 2v4y_A* 2bnd_A*
Probab=99.90 E-value=2.1e-23 Score=190.10 Aligned_cols=182 Identities=18% Similarity=0.213 Sum_probs=138.6
Q ss_pred hhHHHHHHHHHHHHhhhc---------C--C-----------CChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEccc
Q 020431 11 LSYEFIRSTYNFLSNVDS---------G--H-----------ATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTR 68 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~~---------~--~-----------~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~ 68 (326)
++.+.++...+++..+.. + . .+++..|.+.+.|++++++++..+|.++|+++.++++.
T Consensus 28 ~~~~~i~~~a~~I~~l~~~G~~vVlVhGgG~~~~~~~~~~~g~~~~~~d~~~~~~~~~~~~ll~~~l~~~G~~~~~~~~~ 107 (247)
T 2a1f_A 28 IDPAILDRMAVEIKELVEMGVEVSVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAF 107 (247)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEECCChHhcchhHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHHHcCCCeEEeccc
Confidence 456777777777665432 1 1 34445667778899999999999999999999999988
Q ss_pred ceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeecc
Q 020431 69 EVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDV 148 (326)
Q Consensus 69 ~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV 148 (326)
+...+++ . + ....+.++++ .+.|||++|+. |. .++++|++|+.+|.+++|++++|||||
T Consensus 108 ~~~~~~~-~-------~--~~~~~~~ll~--~g~ipVi~~~~-----g~----~~~~~D~~Aa~lA~~l~Ad~liilTDV 166 (247)
T 2a1f_A 108 QLNGICD-T-------Y--NWSEAIKMLR--EKRVVIFSAGT-----GN----PFFTTDSTACLRGIEIEADVVLKATKV 166 (247)
T ss_dssp CCTTTSE-E-------C--CHHHHHHHHH--TTCEEEEESTT-----SC----SSCCHHHHHHHHHHHTTCSEEEEEESS
T ss_pred ccccccc-h-------h--hHHHHHHHHh--CCCEEEEeCCc-----CC----CCCCcHHHHHHHHHhCCCCEEEEEeCC
Confidence 7643321 1 1 2234577887 89999999842 22 235789999999999999999999999
Q ss_pred CcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCC---------CCCceEEeC
Q 020431 149 DGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNL---------SVPGIMICR 216 (326)
Q Consensus 149 ~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~---------~~~GT~I~~ 216 (326)
||||++||+++|+++++++++++|+.++ |.++|+|+++.+|.++|++++|.|+.+| +..||+|..
T Consensus 167 dGvy~~dP~~~p~a~~i~~i~~~e~~~~---g~~~m~~~aa~~a~~~gv~v~I~~~~~~~~l~~~l~g~~~GT~~~~ 240 (247)
T 2a1f_A 167 DGVYDCDPAKNPDAKLYKNLSYAEVIDK---ELKVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTICE 240 (247)
T ss_dssp SSCBCC-------CCBCSEECHHHHHHT---TCCSSCHHHHHHHHHHTCCEEEEETTSTTHHHHHHTCSCSSEEECC
T ss_pred CcccCCCCCCCCCCeEcccCCHHHHHHc---CccccCHHHHHHHHHcCCcEEEEeCCCchHHHHHHcCCCCceEEee
Confidence 9999999999999999999999999874 7899999999999999999999998754 346888853
No 9
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=99.90 E-value=9.6e-23 Score=185.47 Aligned_cols=182 Identities=20% Similarity=0.201 Sum_probs=144.1
Q ss_pred hhHHHHHHHHHHHHhhhc---------C--C-----------CChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEccc
Q 020431 11 LSYEFIRSTYNFLSNVDS---------G--H-----------ATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTR 68 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~~---------~--~-----------~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~ 68 (326)
++.++++....++..+.. + . .+....|++-....++++.++..+|.+.|++++.+++.
T Consensus 29 ~~~~~i~~la~~i~~l~~~G~~vviV~gGG~~~~~~~~~~~g~~~~~~d~~g~l~t~~N~~~l~~al~~~G~~a~~~~~~ 108 (243)
T 3ek6_A 29 IDPKVINRLAHEVIEAQQAGAQVALVIGGGNIFRGAGLAASGMDRVTGDHMGMLATVINALAMQDALEKLGAKVRVMSAI 108 (243)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEECSTTTSCSTTTSCSSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHHHcCCCeEEechh
Confidence 667888888888876643 1 1 12223343323344677888999999999999999998
Q ss_pred ceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeecc
Q 020431 69 EVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDV 148 (326)
Q Consensus 69 ~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV 148 (326)
++..+++ .++. +.+.++++ .|.|||++|+. |.. ++++|++|+++|.+++|+++++||||
T Consensus 109 ~~~~v~~------~~~~----~~~~~lL~--~g~IpVv~~~~-----g~~----~~~~D~~Aa~lA~~l~Ad~li~lTdV 167 (243)
T 3ek6_A 109 KINDVCE------DFIR----RRAIRHLE--KGRIAIFAAGT-----GNP----FFTTDSGAALRAIEIGADLLLKATKV 167 (243)
T ss_dssp CBTTTBE------ECCH----HHHHHHHH--TTCEEEEESTT-----SST----TCCHHHHHHHHHHHHTCSEEEEECSS
T ss_pred hcCcccC------cCCH----HHHHHHHH--CCcEEEEECCC-----CCC----cCChHHHHHHHHHHcCCCEEEEEeCC
Confidence 8654322 1233 67888998 89999999842 221 25689999999999999999999999
Q ss_pred CcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCC---------CCCceEEeC
Q 020431 149 DGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNL---------SVPGIMICR 216 (326)
Q Consensus 149 ~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~---------~~~GT~I~~ 216 (326)
||||++||+++|+|+++++++++|+.+ .|.++|+++|+..|.++|+|++|.|+++| +..||.|.+
T Consensus 168 dGvy~~dp~~~p~a~~i~~i~~~e~~~---~g~~~~~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 241 (243)
T 3ek6_A 168 DGVYDKDPKKHSDAVRYDSLTYDEVIM---QGLEVMDTAAFALARDSDLPLRIFGMSEPGVLLRILHGAQIGTLVQG 241 (243)
T ss_dssp SSCBSSCGGGCTTCCBCSEECHHHHHH---HTCCSSCHHHHHHHHHTTCCEEEECCCSTTHHHHHHTTCCCSEEECC
T ss_pred CccCCCCCCCCCCceecccccHHHHHh---CCchhHHHHHHHHHHHCCCeEEEEcCCCccHHHHHHCCCCCceEEee
Confidence 999999999999999999999999876 37889999999999999999999998754 346999876
No 10
>2jjx_A Uridylate kinase, UMP kinase; structural genomics, pyrimidine biosynthesis, ATP-binding, nucleotide-binding, OPPF, PYRH, cytoplasm; HET: ATP; 2.82A {Bacillus anthracis}
Probab=99.90 E-value=8.4e-23 Score=187.08 Aligned_cols=151 Identities=18% Similarity=0.285 Sum_probs=126.0
Q ss_pred chHHHHHHHHHHHHH-cCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccc
Q 020431 43 GELWSAQMLAAVVRK-NGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTL 121 (326)
Q Consensus 43 GE~~s~~~~~~~L~~-~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~l 121 (326)
+..+++.+++..|.+ +|+++.++++.++..+++ ..+. ..+.++++ .|.|||++| + ++++.++
T Consensus 86 ~~~~~~~ll~~~l~~~~Gi~a~~l~~~~~~~v~~------~~~~----~~~~~lL~--~g~IpVi~g--g-~g~~~vt-- 148 (255)
T 2jjx_A 86 GTIINSLMLRGVLTSKTNKEVRVMTSIPFNAVAE------PYIR----LRAVHHLD--NGYIVIFGG--G-NGQPFVT-- 148 (255)
T ss_dssp HHHHHHHHHHHHHHHHCSSCEEEEESSCCCSSSE------ECCH----HHHHHHHH--TTCEEEEES--T-TSCSSCC--
T ss_pred HHHHHHHHHHHHHHhhcCCceEEecHHHcCcccC------cccH----HHHHHHHh--CCcEEEEeC--C-CCCCccc--
Confidence 346888888999999 999999999988764332 1122 33447887 899999998 3 3333332
Q ss_pred cCCcchHHHHHHHHhhccceEEEee-ccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEE
Q 020431 122 KRDGSDFSAAIMGALLRAHQVTIWT-DVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIV 200 (326)
Q Consensus 122 grggsD~~A~~lA~~l~a~~~~~~t-DV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~ 200 (326)
+|++|+.+|.+|+|+++++|| ||||||++||+++|+++++++++++|+.++ |.++|+|.|++++.++|++++
T Consensus 149 ----tD~~Aa~lA~~l~Ad~liilT~DVdGVy~~dP~~~p~a~~i~~is~~e~~~~---G~~~m~~~a~~~a~~~gi~v~ 221 (255)
T 2jjx_A 149 ----TDYPSVQRAIEMNSDAILVAKQGVDGVFTSDPKHNKSAKMYRKLNYNDVVRQ---NIQVMDQAALLLARDYNLPAH 221 (255)
T ss_dssp ----SHHHHHHHHHHHTCSEEEEEESSCCSCBSSCTTTCSSCCBCSEEEHHHHHHT---TCCSSCHHHHHHHHHHTCCEE
T ss_pred ----hHHHHHHHHHhcCCCEEEEEeCCcCeeECCCCCCCCCCeEeeEecHHHHHHc---CCccCHHHHHHHHHHcCCeEE
Confidence 499999999999999999999 999999999999999999999999988764 889999999999999999999
Q ss_pred EEeccCCC---------CCceEEeCC
Q 020431 201 IRNIFNLS---------VPGIMICRP 217 (326)
Q Consensus 201 I~n~~~~~---------~~GT~I~~~ 217 (326)
|.|+++|+ ..||.|.++
T Consensus 222 I~~~~~~~~l~~~l~g~~~GT~I~~~ 247 (255)
T 2jjx_A 222 VFNFDEPGVMRRICLGEHVGTLINDD 247 (255)
T ss_dssp EEETTSTTHHHHHHBTCCCSEEEESS
T ss_pred EEeCCCchHHHHHhcCCCCceEEecC
Confidence 99998763 579999874
No 11
>4a7w_A Uridylate kinase; transferase; HET: GTP; 1.80A {Helicobacter pylori} PDB: 4a7x_A*
Probab=99.90 E-value=1.1e-22 Score=184.74 Aligned_cols=180 Identities=18% Similarity=0.238 Sum_probs=140.9
Q ss_pred hhHHHHHHHHHHHHhhhc---------C--C------------CChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcc
Q 020431 11 LSYEFIRSTYNFLSNVDS---------G--H------------ATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDT 67 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~~---------~--~------------~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~ 67 (326)
++.++++...+++..+.. + . ......|.+-....++++.+++..|+++|++++.+++
T Consensus 27 ~~~~~i~~~a~~I~~l~~~G~~vvlV~gGG~~~~g~~~~~~G~~~~~~~~~~~~la~~~n~~l~~~~l~~~G~~av~lt~ 106 (240)
T 4a7w_A 27 IDIHVLDHIAKEIKSLVENDIEVGIVIGGGNIIRGVSAAQGGIIRRTSGDYMGMLATVINAVAMQEALEHIGLDTRVQSA 106 (240)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEECCTTTC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHCCCcEEEEECCcHHHhHhHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEecH
Confidence 577788888787776543 1 0 1111122222234678889999999999999999999
Q ss_pred cceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeec
Q 020431 68 REVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTD 147 (326)
Q Consensus 68 ~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tD 147 (326)
.++..... ..+. +.+.++++ .+.|||++|+.+ .. .+.+|++|+++|.+++|+++++|||
T Consensus 107 ~d~~~~~~------~~~~----~~i~~lL~--~g~ipVi~~~~g-----~~----~~~~D~~Aa~lA~~l~Ad~li~lTd 165 (240)
T 4a7w_A 107 IEIKEICE------SYIY----RKAIRHLE--KGRVVIFGAGTG-----NP----FFTTDTAATLRAIEIGSDLIIKATK 165 (240)
T ss_dssp SCCTTTSE------ECCH----HHHHHHHH--TTCEEEEESTTS-----CT----TSCHHHHHHHHHHHTTCSEEEEEES
T ss_pred HHcCcccC------cCcH----HHHHHHHH--CCCEEEEeCCCC-----CC----CCChHHHHHHHHHHcCCCEEEEccC
Confidence 88753221 1233 67788888 899999998532 21 1347999999999999999999999
Q ss_pred cCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCC----------CCceEE
Q 020431 148 VDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLS----------VPGIMI 214 (326)
Q Consensus 148 V~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~----------~~GT~I 214 (326)
|||||++||+++|+|+++++++++|+.+. |.++|+++|+.+|.++|+|++|.|+++|+ ..||.|
T Consensus 166 VdGvy~~dp~~~p~a~~i~~i~~~e~~~~---g~~~m~~~a~~~a~~~gv~v~I~~g~~~~~l~~~l~g~~g~GT~i 239 (240)
T 4a7w_A 166 VDGIYDKDPNKFKDAKKLDTLSYNDALIG---DIEVMDDTAISLAKDNKLPIVVCNMFKKGNLLQVIKHQQGVFSMV 239 (240)
T ss_dssp SSSEESSCTTTCTTCCEESEECHHHHHHS---SCCSSCHHHHHHHHHTTCCEEEEESSSTTHHHHHHHHSCSSCEEE
T ss_pred CCceECCCCCCCCCCeEcceecHHHHHhc---CccccHHHHHHHHHHCCCeEEEECCCCccHHHHHHCCCCCCceee
Confidence 99999999999999999999999998764 88999999999999999999999997653 357876
No 12
>2j4j_A Uridylate kinase; transferase, nucleoside monophosphate kinase, UMP kinase, aspartokinase fold, pyrimidine nucleotide synthesis; HET: U5P ACP 4TC; 2.1A {Sulfolobus solfataricus} PDB: 2j4k_A* 2j4l_A*
Probab=99.90 E-value=4.8e-23 Score=185.29 Aligned_cols=150 Identities=19% Similarity=0.246 Sum_probs=125.4
Q ss_pred ChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccc
Q 020431 32 TESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (326)
Q Consensus 32 ~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~ 111 (326)
++...|.+.+.|+.+++.++...|+++|+++ + .++. ++++++++ .+.|||++| +
T Consensus 60 ~~~~~~~~~~~~~~~~~~l~~~~l~~~g~~~------------~------~~~~----~~i~~ll~--~g~ipVi~g--g 113 (226)
T 2j4j_A 60 GEAYLDLLGIWASRLNAYLVMFSLQDLAYMH------------V------PQSL----EEFIQDWS--HGKVVVTGG--F 113 (226)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTSBCSC------------C------CSSH----HHHHHHHT--TSSBEEECC--C
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHhCCCC------------C------cCCH----HHHHHHHH--CCCEEEEcC--C
Confidence 3466788889999999999999999999954 1 1344 77888888 899999998 2
Q ss_pred cCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhc-CCc------cc
Q 020431 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF-GAN------VL 184 (326)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~-g~~------v~ 184 (326)
+. .+++|++|+.+|.+|+|+++++||||||||++||+++|+++++++++++|+.+++.. |.+ ++
T Consensus 114 -~~--------~~~~D~~Aa~lA~~l~Ad~liilTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~l~~~~~~~~ggm~~~~ 184 (226)
T 2j4j_A 114 -QP--------GQSTAAVAALVAEASSSKTLVVATNVDGVYEKDPRIYADVKLIPHLTTQDLRKILEGSQSVQAGTYELL 184 (226)
T ss_dssp -ST--------TSCHHHHHHHHHHHTTCSEEEEEESSSSCBSSCTTTSSSCCBCSEEEHHHHHHHHC----------CCS
T ss_pred -CC--------CCCcHHHHHHHHHhcCCCEEEEeeccceeeCCCCCCCCCCeEccccCHHHHHHHhhcCCCCcCCccccc
Confidence 11 356899999999999999999999999999999999999999999999999999643 554 78
Q ss_pred chhhHHHHHhCCCCEEEEeccCCC---------CCceEEeC
Q 020431 185 HPRTIIPVMRYDIPIVIRNIFNLS---------VPGIMICR 216 (326)
Q Consensus 185 ~~~a~~~a~~~~I~v~I~n~~~~~---------~~GT~I~~ 216 (326)
|++++.+|.++|+|++|.|+++|+ ..||.|.+
T Consensus 185 k~~a~~~a~~~gi~v~I~~~~~~~~l~~~~~g~~~GT~i~~ 225 (226)
T 2j4j_A 185 DPLAIKIVERSKIRVIVMNYRKLNRIIDILKGEEVSSIIEP 225 (226)
T ss_dssp CHHHHHHHHHTTCEEEEEEGGGGGGHHHHHTTCSSCEEEEC
T ss_pred hHHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEEee
Confidence 999999999999999999986543 46898865
No 13
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=99.89 E-value=2.6e-22 Score=183.52 Aligned_cols=184 Identities=20% Similarity=0.263 Sum_probs=144.9
Q ss_pred hhHHHHHHHHHHHHhhhc---------C--C-----------CChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEccc
Q 020431 11 LSYEFIRSTYNFLSNVDS---------G--H-----------ATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTR 68 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~~---------~--~-----------~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~ 68 (326)
++.+.++...++|..+.. + . .+++..|.+-+.+++++++++...|.+.|+++..+.+.
T Consensus 27 ~~~~~~~~~a~~I~~l~~~G~~vVlVhGgG~~~~g~~~~~lg~~~~~~~~~~~~~~~~~~~ll~~al~~~G~~~~~~~~~ 106 (252)
T 1z9d_A 27 IDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRVQADYTGMLGTVMNALVMADSLQHYGVDTRVQTAI 106 (252)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCEEEEEECCTTTCCHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEECCChHhccchHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCeEEEecc
Confidence 456677777777766532 1 1 22333445566778889998999999999999999987
Q ss_pred ceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEee-c
Q 020431 69 EVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWT-D 147 (326)
Q Consensus 69 ~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~t-D 147 (326)
+...+.+ . + ....+.++++ .|.|||++|+. |. .++++|++|+.+|.+++|++++||| |
T Consensus 107 ~~~~~~~-~-------~--~~~~~~~lL~--~g~IpVi~~~~-----g~----~~~~~D~~Aa~lA~~l~Ad~LiilT~D 165 (252)
T 1z9d_A 107 PMQNVAE-P-------Y--IRGRALRHLE--KNRIVVFGAGI-----GS----PYFSTDTTAALRAAEIEADAILMAKNG 165 (252)
T ss_dssp CBTTTBE-E-------C--CHHHHHHHHH--TTCEEEEESTT-----SC----TTCCHHHHHHHHHHHTTCSEEEEEESS
T ss_pred ccccccC-c-------c--hHHHHHHHHh--CCCEEEEeCCc-----CC----CCCChHHHHHHHHHhcCCCEEEEecCC
Confidence 6643322 1 1 1234477887 89999999832 22 2467999999999999999999999 9
Q ss_pred cCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCC---------CCceEEeCCC
Q 020431 148 VDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLS---------VPGIMICRPP 218 (326)
Q Consensus 148 V~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~---------~~GT~I~~~~ 218 (326)
|||||++||+++|+++++++++++|+.+ .|.++|+++++..|.++|++++|.|+.+|+ ..||.|.++.
T Consensus 166 VdGvy~~dP~~~~~a~~i~~i~~~e~~~---~~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~~~~ 242 (252)
T 1z9d_A 166 VDGVYNADPKKDANAVKFDELTHGEVIK---RGLKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTVSNKV 242 (252)
T ss_dssp CCSCBSSCTTTCTTCCBCSEEEHHHHHT---TTCCCSCHHHHHHHHHTTCEEEEEETTSTTHHHHHHTTCCCSEEEECC-
T ss_pred CCeeeCCCCCCCCCCeEeeEecHHHHHh---ccccccCHHHHHHHHHcCCeEEEEeCCCchHHHHHHcCCCCceEEecCC
Confidence 9999999999999999999999999876 478899999999999999999999997664 5799998753
No 14
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=99.88 E-value=2.8e-22 Score=187.71 Aligned_cols=174 Identities=14% Similarity=0.201 Sum_probs=138.9
Q ss_pred hhHHhH--hhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCC-C---CCCc-------hhhHHHHHHHhhcC
Q 020431 33 ESFTDF--VVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQ-V---DPDF-------SESEKRLEKWFSQS 99 (326)
Q Consensus 33 ~~~~d~--i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~-~---~~~~-------~~~~~~i~~~l~~~ 99 (326)
+...+. .++.|+. ...++..|+++|++++++++.+..++++..++. . .+|+ ....+.++++++
T Consensus 92 ~~~l~~~~~~~~G~l--~~~l~~~L~~~g~~av~lt~~d~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~~~i~~lL~-- 167 (299)
T 2ap9_A 92 PEVLDVARMVLFGQV--GRELVNLINAHGPYAVGITGEDAQLFTAVRRSVTVDGVATDIGLVGDVDQVNTAAMLDLVA-- 167 (299)
T ss_dssp HHHHHHHHHHHHHTH--HHHHHHHHTTSSSCEEEEETTGGGCEEEEECCBCSSSCCBCCBSEEEEEEECHHHHHHHHH--
T ss_pred HHHHHHHHHHHhhHH--HHHHHHHHHhCCCCceEechhHCCEEEEEecccccccccCCCCcceeEEEecHHHHHHHHh--
Confidence 344444 4457885 334799999999999999998864444322110 0 0110 012378899998
Q ss_pred CCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhc
Q 020431 100 PSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF 179 (326)
Q Consensus 100 ~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~ 179 (326)
.|.|||++|+ +.++.|+.+++ ++|++|+.+|.+|+|++++|||||||||++||+ +++++++++++|+.+++.+
T Consensus 168 ~g~IpVv~~v-~~~~~G~~~~l---~~D~~Aa~lA~~l~Ad~liilTDVdGV~~~dP~---~~~~i~~is~~e~~~l~~~ 240 (299)
T 2ap9_A 168 AGRIPVVSTL-APDADGVVHNI---NADTAAAAVAEALGAEKLLMLTDIDGLYTRWPD---RDSLVSEIDTGTLAQLLPT 240 (299)
T ss_dssp TTCEEEEESE-EECTTCCEEEE---CHHHHHHHHHHHTTCSEEEEEESSSSEETTTTC---TTCEESEEEHHHHHHHGGG
T ss_pred CCCeEEECCe-eECCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCChhhhcCCCC---CCcChhhcCHHHHHHHHHh
Confidence 8999999998 88899998887 489999999999999999999999999999998 5799999999999999988
Q ss_pred CCcccchh--hHHHHHhCCCC-EEEEeccCCC----------CCceEEeCC
Q 020431 180 GANVLHPR--TIIPVMRYDIP-IVIRNIFNLS----------VPGIMICRP 217 (326)
Q Consensus 180 g~~v~~~~--a~~~a~~~~I~-v~I~n~~~~~----------~~GT~I~~~ 217 (326)
++++|+|+ ++..+.++|++ ++|.|+.+|+ ..||.|.++
T Consensus 241 ~~ggM~~Kl~aa~~a~~~gv~~v~I~~g~~p~~ll~~l~~~~~~GT~i~~~ 291 (299)
T 2ap9_A 241 LELGMVPKVEACLRAVIGGVPSAHIIDGRVTHCVLVELFTDAGTGTKVVRG 291 (299)
T ss_dssp SCTTTHHHHHHHHHHHHHTCSEEEEEETTSTTHHHHHHHSCCCCSEEEECC
T ss_pred hcCchHHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHhcCCCCcEEEecC
Confidence 99999996 88899999999 9999987553 458999764
No 15
>2j5v_A Glutamate 5-kinase; proline biosynthesis, gamma glutamyl kinase, amino-acid biosynthesis, transferase, feedback regulation, PUA domain; HET: RGP; 2.5A {Escherichia coli} PDB: 2j5t_A* 2w21_A
Probab=99.88 E-value=8.9e-23 Score=195.94 Aligned_cols=193 Identities=16% Similarity=0.208 Sum_probs=118.5
Q ss_pred hhHHHHHHHHHHHHhhhc---------C---------------CCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEc
Q 020431 11 LSYEFIRSTYNFLSNVDS---------G---------------HATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMD 66 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~~---------~---------------~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~ 66 (326)
++.+.++...+++..+.. + +.+-...+.+.+.|+..+++.+...|.++|+++..
T Consensus 23 ~~~~~l~~la~~Ia~l~~~G~~vVlV~gGgi~~g~~~lg~~~~~~~l~~~qa~aavGq~~l~~~~~~~l~~~G~~~~q-- 100 (367)
T 2j5v_A 23 LNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQ-- 100 (367)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEE--
T ss_pred cCHHHHHHHHHHHHHHHhCCCcEEEEEcCHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCceEE--
Confidence 556777777777766532 1 11224566677899999999999999999998863
Q ss_pred ccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCccc--ccCCcchHHHHHHHHhhccceEEE
Q 020431 67 TREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTT--LKRDGSDFSAAIMGALLRAHQVTI 144 (326)
Q Consensus 67 ~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~--lgrggsD~~A~~lA~~l~a~~~~~ 144 (326)
+.+..++ +.. ...+...++.++++++ .|.|||+.+ ++.+.+ +.+|++|++|+.+|.+++|+.+++
T Consensus 101 ---vllt~~d-~~~-~~r~~n~~~~i~~LL~--~g~IPIv~e------nd~v~~~el~~gd~D~lAa~vA~~l~Ad~Lii 167 (367)
T 2j5v_A 101 ---MLLTRAD-MED-RERFLNARDTLRALLD--NNVVPVINE------NDAVATAEIKVGDNDNLSALAAILAGADKLLL 167 (367)
T ss_dssp ---EEECGGG-GSS-HHHHHHHHHHHHHHHH--TTCEEEEEE------CTTSCCGGGCCCSHHHHHHHHHHHHTCSEEEE
T ss_pred ---EEEeccc-ccC-ceEEEhHHHHHHHHHH--CCCEEEECC------CCceecccccCCCHHHHHHHHHHhcCCCEEEE
Confidence 3332222 211 1223344578888888 899999963 233333 668999999999999999999999
Q ss_pred eeccCcccccCCCCCCCCeEEeeecH--HHHHHHhh-----cCCcccch--hhHHHHHhCCCCEEEEeccCCC-------
Q 020431 145 WTDVDGVYSADPRKVSEAVILRTLSY--QEAWEMSY-----FGANVLHP--RTIIPVMRYDIPIVIRNIFNLS------- 208 (326)
Q Consensus 145 ~tDV~Gv~~~dP~~~~~a~~i~~ls~--~e~~~l~~-----~g~~v~~~--~a~~~a~~~~I~v~I~n~~~~~------- 208 (326)
||||||||++||+++|++++++++++ +|+.+++. +|+++|+| .|+..|.++|++++|.|+++|+
T Consensus 168 lTDVdGvy~~dP~~~p~a~~I~~i~~~~~e~~~l~~~~~s~~gtGgM~~Kl~Aa~~a~~~Gv~v~I~~g~~~~~L~~~l~ 247 (367)
T 2j5v_A 168 LTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGDVME 247 (367)
T ss_dssp EECC------------------------------------------CHHHHHHHHHHHHTTCEEEEEETTSTTHHHHHHH
T ss_pred eecCCceECCCCCCCCCCeEeeeeCCCHHHHHHHhhccCCCcCcCccHHHHHHHHHHHHcCCCEEEEcCCCchHHHHHhc
Confidence 99999999999999999999999999 89998875 47889999 5899999999999999998765
Q ss_pred --CCceEEeCCC
Q 020431 209 --VPGIMICRPP 218 (326)
Q Consensus 209 --~~GT~I~~~~ 218 (326)
..||+|.+..
T Consensus 248 g~~~GT~i~~~~ 259 (367)
T 2j5v_A 248 GISVGTLFHAQA 259 (367)
T ss_dssp TCCCSEEECCCS
T ss_pred CCCCcEEEEcCc
Confidence 6799998753
No 16
>3nwy_A Uridylate kinase; allosterically activated form, AAK fold, UMP kinase, transfe; HET: GTP UDP; 2.54A {Mycobacterium tuberculosis}
Probab=99.88 E-value=1.7e-21 Score=180.40 Aligned_cols=181 Identities=19% Similarity=0.247 Sum_probs=139.0
Q ss_pred hhHHHHHHHHHHHHhhhc---------C-------------CCChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEccc
Q 020431 11 LSYEFIRSTYNFLSNVDS---------G-------------HATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTR 68 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~~---------~-------------~~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~ 68 (326)
|+.++++...+++.++.. + ..+....|.+-..++++++.++...|.++|++++.+.+.
T Consensus 69 ld~~~i~~la~~I~~l~~~G~~vviV~GgG~i~~g~~~~~~gl~~~~~d~~g~lat~~n~~~l~~~L~~~Gi~a~~~~~~ 148 (281)
T 3nwy_A 69 LDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAI 148 (281)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEECCTTC---CCTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEECChhHhhhHHHHhcCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 678888888888877654 1 122334555666788999999999999999999988877
Q ss_pred ceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeecc
Q 020431 69 EVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDV 148 (326)
Q Consensus 69 ~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV 148 (326)
+...+.+ .| .+ .+.+ ++|+ .|.|||+.|+. |. .++++|++|+++|..++|+.+++||||
T Consensus 149 ~~~~~~~-~~----~~----~~~l-~lL~--~g~IpVv~g~~-----g~----~~~~~D~~Aa~lA~~l~Ad~LiilTDV 207 (281)
T 3nwy_A 149 TMGQVAE-PY----LP----LRAV-RHLE--KGRVVIFGAGM-----GL----PYFSTDTTAAQRALEIGADVVLMAKAV 207 (281)
T ss_dssp CCGGGSE-EC----CH----HHHH-HHHH--TTCEEEEESTT-----SS----TTCCHHHHHHHHHHHTTCSEEEEEESS
T ss_pred ccccccc-cc----ch----HHHH-HHHH--cCCeEEEECCC-----CC----CCCCHHHHHHHHHHHcCCCEEEEeecc
Confidence 6654442 11 11 1344 6887 89999999842 22 135789999999999999999999999
Q ss_pred CcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCC---------CCceEEe
Q 020431 149 DGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLS---------VPGIMIC 215 (326)
Q Consensus 149 ~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~---------~~GT~I~ 215 (326)
||||++||+++|+|++++++++.|+.+ .|.++++++|+..|.++|+|++|.|+.+|+ ..||+|.
T Consensus 208 dGVy~~dP~~~p~A~~i~~is~~e~~~---~g~~v~k~~Aa~~a~~~Gi~v~I~~g~~p~~l~~~l~Ge~~GT~i~ 280 (281)
T 3nwy_A 208 DGVFAEDPRVNPEAELLTAVSHREVLD---RGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIGTLVT 280 (281)
T ss_dssp SSCBCC-----CCCCBCSEECHHHHHT---TTCCSSCHHHHHHHHTTTCCEEEEETTSTTHHHHHHHTCCCSEEEC
T ss_pred CccccCCCCcCCCCeEcccccHHHHHH---cCCCcHHHHHHHHHHHCCCeEEEecCCCchHHHHHHcCCCCceEEe
Confidence 999999999999999999999998754 478899999999999999999999997643 4688874
No 17
>3ll9_A Isopentenyl phosphate kinase; mevalonate biosynthesis isoprenoid, transferase; HET: ADP; 2.15A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.87 E-value=3.7e-22 Score=184.19 Aligned_cols=155 Identities=16% Similarity=0.169 Sum_probs=120.7
Q ss_pred HHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCC--CCcccccCCcch
Q 020431 50 MLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD--NIPTTLKRDGSD 127 (326)
Q Consensus 50 ~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~--g~~~~lgrggsD 127 (326)
.+++.|+++|++++.+++.+..+++.++. ..++. +.++++++ .+.|||++||++.+.+ |++.++ ++|
T Consensus 93 ~l~~~L~~~G~~a~~l~g~~~~~~~~g~v--~~v~~----~~i~~lL~--~g~ipVi~~~~~~~~~~~g~~~~~---~~D 161 (269)
T 3ll9_A 93 HVCDALLAEGIPAVSMQPSAFIRAHAGRI--SHADI----SLIRSYLE--EGMVPVVYGDVVLDSDRRLKFSVI---SGD 161 (269)
T ss_dssp HHHHHHHHTTCCEEECCGGGTEEEETTEE--EEECC----HHHHHHHH--TTCEEEEECEEEEBSCTTTSEEEE---CHH
T ss_pred HHHHHHHHCCCcEEEEcchHcCeEecCee--eeecH----HHHHHHHH--CCCEEEECCCEEecccccCcceec---chH
Confidence 57999999999999999999877654221 23455 88999998 8999999999998888 888876 489
Q ss_pred HHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhh-----cCCcccchh--hHHHHHhCCCCEE
Q 020431 128 FSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSY-----FGANVLHPR--TIIPVMRYDIPIV 200 (326)
Q Consensus 128 ~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~-----~g~~v~~~~--a~~~a~~~~I~v~ 200 (326)
++|+.+|.+|+|+++++||||||||++||+++|++++++++++.|+.++.. .+..+|.|+ ++..+.++|++++
T Consensus 162 ~~Aa~lA~~l~Ad~li~ltdv~Gv~~~dp~~~~~a~~i~~i~~~e~~~~l~~~~~~~~tgGM~~Kl~aa~~a~~~Gv~v~ 241 (269)
T 3ll9_A 162 QLINHFSLRLMPERVILGTDVDGVYTRNPKKHPDARLLDVIGSLDDLESLDGTLNTDVTGGMVGKIRELLLLAEKGVESE 241 (269)
T ss_dssp HHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCSBCCC-------------------SHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCCeEEEecCCCEEEcCCCCcCCcceEccccCHHHHHHHhcccCCCcCcCCcHHHHHHHHHHHhCCCeEE
Confidence 999999999999999999999999999999999999999999999977643 345788885 6777778999999
Q ss_pred EEeccCC---------CCC-ceEEe
Q 020431 201 IRNIFNL---------SVP-GIMIC 215 (326)
Q Consensus 201 I~n~~~~---------~~~-GT~I~ 215 (326)
|.|+..| +.. ||.|.
T Consensus 242 I~~g~~~~~l~~~~~g~~~~GT~i~ 266 (269)
T 3ll9_A 242 IINAAVPGNIERALLGEEVRGTRIT 266 (269)
T ss_dssp EEESSSTTHHHHHHHTCCCSSEEC-
T ss_pred EEeCCCchHHHHHHCCCCCCcEEEE
Confidence 9998654 345 88875
No 18
>2ogx_A Molybdenum storage protein subunit alpha; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.86 E-value=1.1e-21 Score=181.73 Aligned_cols=161 Identities=17% Similarity=0.206 Sum_probs=125.0
Q ss_pred hhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCcccc
Q 020431 33 ESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAS 112 (326)
Q Consensus 33 ~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~ 112 (326)
+...+.+...++.++..+++..+...|++++. +....+.++++++ .|.|||++||++.
T Consensus 98 ~~~l~~v~~~~~~~n~~l~~~ll~~~g~~~v~--------------------~~~~~~~i~~lL~--~g~IpVi~~~~~~ 155 (276)
T 2ogx_A 98 VGSLAPLAASEAGQNGHILAAMLASEGVSYVE--------------------HPTVADQLAIHLS--ATRAVVGSAFPPY 155 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTCCBCC--------------------HHHHHHHHHHHHH--HSSEEEEESSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc--------------------ccChHHHHHHHHh--CCCEEEEcCCccc
Confidence 33445555556666766666666566664321 1123377888998 8999999998776
Q ss_pred CCCCCc-ccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCC--CCCCCeEEeeecHHHHHHHhhcCCcccchhhH
Q 020431 113 TPDNIP-TTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPR--KVSEAVILRTLSYQEAWEMSYFGANVLHPRTI 189 (326)
Q Consensus 113 ~~~g~~-~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~--~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~ 189 (326)
+.++.+ ..+.++++|++|+.+|.+|+|+++++||||||||++||+ .+|+++++++++++|+.+++ |.++|+|++.
T Consensus 156 ~~~e~~G~~~~~~~~D~~Aa~lA~~l~Ad~LiilTDVdGvy~~dP~~~~~~~a~~i~~i~~~e~~~~~--g~ggM~~K~~ 233 (276)
T 2ogx_A 156 HHHEFPGSRIPPHRADTGAFLLADAFGAAGLTIVENVDGIYTADPNGPDRGQARFLPETSATDLAKSE--GPLPVDRALL 233 (276)
T ss_dssp GGGCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCTTSTTGGGCCEESEEEHHHHHTSC--SCCSSCHHHH
T ss_pred ccccccCCcCCCCChHHHHHHHHHHcCCCEEEEEeCCCccCCCCCCccCCCCCeEcceeCHHHHHHHh--CcCChHHHHH
Confidence 622211 122346799999999999999999999999999999999 89999999999999998887 8899999998
Q ss_pred HHHH--hCCCCEEEEeccCC---------CCCceEEeCC
Q 020431 190 IPVM--RYDIPIVIRNIFNL---------SVPGIMICRP 217 (326)
Q Consensus 190 ~~a~--~~~I~v~I~n~~~~---------~~~GT~I~~~ 217 (326)
..+. +.+++++|.|+.+| +..||.|.++
T Consensus 234 ~~~~~~~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 272 (276)
T 2ogx_A 234 DVMATARHIERVQVVNGLVPGRLTAALRGEHVGTLIRTG 272 (276)
T ss_dssp HHHHTCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEECS
T ss_pred HHHHHhcCCCeEEEEECCCccHHHHHHcCCCCceEEccC
Confidence 8888 56889999999866 4679999763
No 19
>2egx_A Putative acetylglutamate kinase; struc genomics, NPPSFA, national project on protein structural AN functional analyses; 1.92A {Thermus thermophilus} PDB: 3u6u_A
Probab=99.86 E-value=3.9e-21 Score=177.27 Aligned_cols=170 Identities=12% Similarity=0.118 Sum_probs=131.2
Q ss_pred hhHHhHhhcc--chHHHHHHHHHHHHHcCCceEEEcccceeeccCCCC----------------CC-CCCCchhhHHHHH
Q 020431 33 ESFTDFVVGH--GELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSS----------------NQ-VDPDFSESEKRLE 93 (326)
Q Consensus 33 ~~~~d~i~~~--GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~----------------g~-~~~~~~~~~~~i~ 93 (326)
+...+.+.+. |+. ...+.+.|.++|+++..+++.+..+++.... |. .++.... .+.++
T Consensus 68 ~~~l~~~~~~~~G~i--~~~l~~~l~~~G~~a~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~D~g~~g~i~~v~-~~~i~ 144 (269)
T 2egx_A 68 RKTLEIFEMVYCGLV--NKRLVELLQKEGANAIGLSGLDGRLFVGRRKTAVKYVENGKVKVHRGDYTGTVEEVN-KALLD 144 (269)
T ss_dssp HHHHHHHHHHHHTHH--HHHHHHHHHHTTCCEEEEETTGGGCEEECBC----------------CCEECCCEEC-HHHHH
T ss_pred HHHHHHHHHHHHhHH--HHHHHHHHHHCCCCeEEeCCCCccceeeeecccccccccccccCCcCCCCCCceEEC-HHHHH
Confidence 3455666555 677 7889999999999999999988544332211 11 0111111 37889
Q ss_pred HHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHH
Q 020431 94 KWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEA 173 (326)
Q Consensus 94 ~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~ 173 (326)
++++ .|.|||+++ ++.+++|++.+ +++|++|+.+|..|+|+++++||||||||+ ||+ |+++++++++++|+
T Consensus 145 ~ll~--~g~ipVi~~-v~~~~~g~~~~---~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~-dp~--~~a~~i~~i~~~e~ 215 (269)
T 2egx_A 145 LLLQ--AGYLPVLTP-PALSYENEAIN---TDGDQIAALLATLYGAEALVYLSNVPGLLA-RYP--DEASLVREIPVERI 215 (269)
T ss_dssp HHHH--TTCEEEEEC-CEEETTSCEEE---ECHHHHHHHHHHHHTCSEEEEEESSSSCBC---------CBCCEECHHHH
T ss_pred HHHH--CCCEEEEcC-cEECCCCCEEE---eCHHHHHHHHHHHcCCCEEEEEeCchhhhc-CCC--CCccccccCCHHHh
Confidence 9998 899999996 57788888763 569999999999999999999999999999 993 79999999999999
Q ss_pred H--HHhhcCCcccch--hhHHHHHhCCC-CEEEEeccCCC-------CCceEE
Q 020431 174 W--EMSYFGANVLHP--RTIIPVMRYDI-PIVIRNIFNLS-------VPGIMI 214 (326)
Q Consensus 174 ~--~l~~~g~~v~~~--~a~~~a~~~~I-~v~I~n~~~~~-------~~GT~I 214 (326)
. ++...+.++|+| +++..|.++|+ +++|.|+.+|+ ..||.|
T Consensus 216 ~~~~l~~~~~ggm~~Kl~aa~~a~~~gv~~v~I~~g~~~~~l~~~l~g~GT~i 268 (269)
T 2egx_A 216 EDPEYLALAQGRMKRKVMGAVEAVKGGVKRVVFADGRVENPIRRALSGEGTVV 268 (269)
T ss_dssp HCHHHHTTSCHHHHHHHHHHHHHHHTTCSCEEEEESSSSSHHHHHHTTCSEEE
T ss_pred hHHHhcCCCCCchHHHHHHHHHHHHcCCCeEEEEeCCCchHHHHHhCCCCeEE
Confidence 9 997788899999 48899999999 99999988764 358877
No 20
>2brx_A Uridylate kinase; UMP kinase, amino acid kinase, phosphoryl group transfer, pyrimidine biosynthesis, transferase; 2.40A {Pyrococcus furiosus} SCOP: c.73.1.3 PDB: 2ji5_A* 2bmu_A* 2bri_A*
Probab=99.86 E-value=3.5e-21 Score=175.25 Aligned_cols=150 Identities=25% Similarity=0.293 Sum_probs=123.7
Q ss_pred ChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccc
Q 020431 32 TESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (326)
Q Consensus 32 ~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~ 111 (326)
++...+.+.+.|+.+++.++...|.++|+++ . .++. +.+.++++ .+.|||++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~l~~~g~~~------------~------~~~~----~~i~~lL~--~g~IpVi~g--- 132 (244)
T 2brx_A 80 SETFKDFIGIQITRANAMLLIAALREKAYPV------------V------VEDF----WEAWKAVQ--LKKIPVMGG--- 132 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHGGGBCSS------------C------BCSH----HHHHHHHH--TTCBCEECC---
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHcCCCC------------C------cCCH----HHHHHHHh--CCCEEEEcC---
Confidence 4456677788899999999999999999754 0 1233 67788888 899999998
Q ss_pred cCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhc-CC-----cccc
Q 020431 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF-GA-----NVLH 185 (326)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~-g~-----~v~~ 185 (326)
|.. .+++|++|+.+|.+++|++++|||||||||++||+++|+++++++++++|+.+++.. |. .+++
T Consensus 133 ----g~~----~~~~D~~Aa~lA~~l~Ad~liilTDVdGVy~~dP~~~p~a~~i~~i~~~e~~~~~~~~g~~~g~m~~~~ 204 (244)
T 2brx_A 133 ----THP----GHTTDAVAALLAEFLKADLLVVITNVDGVYTADPKKDPTAKKIKKMKPEELLEIVGKGIEKAGSSSVID 204 (244)
T ss_dssp ----CST----TCCHHHHHHHHHHHTTCSEEEEECSSSSCBSSCTTTCTTCCBCSEECHHHHHHHHHC--------CCSC
T ss_pred ----CCC----CCCchHHHHHHHHHcCCCEEEEEeCCCccCCCCCCCCCCCeEeeEECHHHHHHHHhccCCCCCCCcchH
Confidence 222 245799999999999999999999999999999999999999999999999998543 43 7889
Q ss_pred hhhHHHHHhCCCCEEEEeccCC---------CCCceEEeC
Q 020431 186 PRTIIPVMRYDIPIVIRNIFNL---------SVPGIMICR 216 (326)
Q Consensus 186 ~~a~~~a~~~~I~v~I~n~~~~---------~~~GT~I~~ 216 (326)
+.|++.+.+.+++++|.|+.+| +..||.|.+
T Consensus 205 ~~A~~~~~~~~~~v~I~ng~~~~~l~~~l~g~~~GT~i~~ 244 (244)
T 2brx_A 205 PLAAKIIARSGIKTIVIGKEDAKDLFRVIKGDHNGTTIEP 244 (244)
T ss_dssp HHHHHHHHHHTCCEEEECHHHHTCHHHHHTTCSSSEEECC
T ss_pred HHHHHHHHHCCCeEEEEeCCChhHHHHHHcCCCCceEecC
Confidence 9999999999999999987543 346898853
No 21
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=99.85 E-value=1.1e-20 Score=173.01 Aligned_cols=181 Identities=14% Similarity=0.168 Sum_probs=128.9
Q ss_pred hhHHHHHHHHHHHHhhh--------cC---C----------CChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccc
Q 020431 11 LSYEFIRSTYNFLSNVD--------SG---H----------ATESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTRE 69 (326)
Q Consensus 11 ~~~~~i~~~~~~l~~~~--------~~---~----------~~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~ 69 (326)
++.+.++...++|..+. ++ . .++...+..-+.+..++++++...|.++|+++..+.+.+
T Consensus 44 ~~~~~i~~~a~~i~~l~~g~~vVlVhGgG~~~~~~~~~~~g~~~~~~~~~~~l~~~~n~~l~~~~l~~~Gi~a~~~~~~t 123 (256)
T 2va1_A 44 IDFIKINDLAEQIEKISKKYIVSIVLGGGNIWRGSIAKELDMDRNLADNMGMMATIINGLALENALNHLNVNTIVLSAIK 123 (256)
T ss_dssp SCHHHHHHHHHHHHHHTTTSEEEEEECCTTTCCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEECCcHHhccchHHHcCCCCCchhHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeee
Confidence 45677777777777642 21 1 111122333344457778888999999999999988654
Q ss_pred eeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeec-c
Q 020431 70 VLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTD-V 148 (326)
Q Consensus 70 ~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tD-V 148 (326)
...+. +. ..+..+.++++ .|.|||++|. .| +.++++|++|+.+|..++|+++++||| |
T Consensus 124 ~~~~~-----~~-----~~~~~~~~lL~--~g~IpVi~~~-----~g----~~~~~~D~~Aa~lA~~l~Ad~LiilTD~V 182 (256)
T 2va1_A 124 CDKLV-----HE-----SSANNIKKAIE--KEQVMIFVAG-----TG----FPYFTTDSCAAIRAAETESSIILMGKNGV 182 (256)
T ss_dssp CTTTC-----EE-----CCHHHHHHHHH--TTCEEEEEST-----TS----SSSCCHHHHHHHHHHHHTCSEEEEEESSC
T ss_pred ccccc-----ch-----hhHHHHHHHHh--CCcEEEEECC-----CC----CCCCChhHHHHHHHHhCCCCEEEEeeccc
Confidence 32111 11 12233467888 8999999882 23 234678999999999999999999999 9
Q ss_pred CcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCC---------CCceEEe
Q 020431 149 DGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLS---------VPGIMIC 215 (326)
Q Consensus 149 ~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~---------~~GT~I~ 215 (326)
||||++||+++|+++++++++++|+.++ +.++|+++|+..|.++|++++|.|+.+|+ ..||.|.
T Consensus 183 dGVy~~dP~~~p~a~~i~~is~~e~~~~---~~~~mk~~aa~~a~~~gv~v~I~~g~~~~~l~~~l~g~~~GT~i~ 255 (256)
T 2va1_A 183 DGVYDSDPKINPNAQFYEHITFNMALTQ---NLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVS 255 (256)
T ss_dssp CSBCSCC--------CBSEEEHHHHHHH---TCCSSCHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSCEEEEE
T ss_pred CeEEcCCCCCCCCCEEccEEcHHHHHHh---ccCCccHHHHHHHHHCCCeEEEEeCCCchHHHHHHcCCCCeEEEe
Confidence 9999999999999999999999999887 46788999999999999999999987543 4588874
No 22
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=99.85 E-value=1.5e-21 Score=178.18 Aligned_cols=161 Identities=12% Similarity=0.123 Sum_probs=121.4
Q ss_pred hHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccC
Q 020431 34 SFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIAST 113 (326)
Q Consensus 34 ~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~ 113 (326)
...+.+.+.|+....+.+...|.++|+++..+. .+.+.+.. ...+....+.++.+++ .|.|||++|+-+..
T Consensus 63 ~~~~~l~~~~q~~l~~~~~~~l~~~G~~~~~i~------~~~~~~~~-~~~~~~~~~~i~~ll~--~g~ipVi~~~d~v~ 133 (251)
T 2ako_A 63 INKQVLAAIGQPFLISVYNELLAKFNKLGGQIL------LTGKDFDS-RKATKHAKNAIDMMIN--LGILPIINENDATA 133 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEE------ECTGGGGC-HHHHHHHHHHHHHHHH--TTCEEEEEECTTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEE------eccchhcC-cceEehHHHHHHHHHH--CCCEEEEeCCCcee
Confidence 345678888999999999999999999987432 22211210 0112223367888888 89999998651111
Q ss_pred CCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHH--HHHHHhh-----cCCcccch
Q 020431 114 PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQ--EAWEMSY-----FGANVLHP 186 (326)
Q Consensus 114 ~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~--e~~~l~~-----~g~~v~~~ 186 (326)
. ++. .++++|++|+.+|.+|+|++++|||||||||++||+++|++++++++++. |+.+++. +|+++|.|
T Consensus 134 ~-~~~---~~~~~D~~Aa~lA~~l~Ad~liilTdVdGVy~~dP~~~~~a~~i~~i~~~~~e~~~~~~~~~~~~~~ggm~~ 209 (251)
T 2ako_A 134 I-EEI---VFGDNDSLSAYATHFFDADLLVILSDIDGFYDKNPSEFSDAKRLEKITHIKEEWLQATIKTGSEHGTGGIVT 209 (251)
T ss_dssp C-HHH---HBTTTHHHHHHHHHHTTCSEEEEEESSCSCBSSCTTTCTTCCBCCEESCCCGGGC---------CBSCHHHH
T ss_pred e-cce---eecCchHHHHHHHHhcCCCEEEEEeCCCceeeCCCCCCCCCeEeeEeccchHHHHHHhcccCCCCccCchHH
Confidence 1 111 35789999999999999999999999999999999999999999999998 9988865 56787776
Q ss_pred --hhHHHHHhCCCCEEEEeccCC
Q 020431 187 --RTIIPVMRYDIPIVIRNIFNL 207 (326)
Q Consensus 187 --~a~~~a~~~~I~v~I~n~~~~ 207 (326)
+|+..|.++|++++|.|+.+|
T Consensus 210 k~~aa~~a~~~gv~v~I~~g~~~ 232 (251)
T 2ako_A 210 KLKAAKFLLEHNKKMFLASGFDL 232 (251)
T ss_dssp HHHHHHHHHHTTCEEEEEESSSC
T ss_pred HHHHHHHHHHCCCeEEEEeCCCh
Confidence 589999999999999997654
No 23
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=99.84 E-value=2.9e-21 Score=179.69 Aligned_cols=156 Identities=13% Similarity=0.035 Sum_probs=123.5
Q ss_pred HhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCC
Q 020431 38 FVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNI 117 (326)
Q Consensus 38 ~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~ 117 (326)
...+.|+......+...|.++|+++..+.+.+..+..+ |...++. +.++++++ .|.|||++||++.+++|+
T Consensus 93 ~~~~vt~g~l~~~l~~~l~~~G~~a~~l~~~~~~~t~d---g~~~~~~----~~i~~lL~--~g~IpVi~gd~~~~~~g~ 163 (286)
T 3d40_A 93 AGLTEATFEVKKRWAEKLRGIGVDAFPLQLAAMCTLRN---GIPQLRS----EVLRDVLD--HGALPVLAGDALFDEHGK 163 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEECCGGGTEEEET---TEEEECC----SHHHHHHH--TTCEEEEECEEEEBTTSC
T ss_pred hcchhhHHHHHHHHHHHHHHcCCcEEEEEeecCCcccC---CeEEehH----HHHHHHHH--CcCEEEEcCCeEEcCCCC
Confidence 34566666667899999999999999998877654222 1112334 67888998 899999999989888887
Q ss_pred cccccCCcchHHHHHHHHh-hccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhh--------cCCcccch--
Q 020431 118 PTTLKRDGSDFSAAIMGAL-LRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSY--------FGANVLHP-- 186 (326)
Q Consensus 118 ~~~lgrggsD~~A~~lA~~-l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~--------~g~~v~~~-- 186 (326)
+ .++++|++|+.+|.+ |+|++++|+|||||||++||+ ++++++++++.|+.++.. ++.++|+|
T Consensus 164 ~---~~~~~D~~Aa~lA~~~l~Ad~LiilTDVdGVy~~dP~---~a~~i~~is~~e~~~l~~~~~~~~~~~~tggM~~Kl 237 (286)
T 3d40_A 164 L---WAFSSDRVPEVLLPMVEGRLRVVTLTDVDGIVTDGAG---GDTILPEVDARSPEQAYAALWGSSEWDATGAMHTKL 237 (286)
T ss_dssp E---EEECGGGHHHHTTTTCCSCEEEEEEESSSSCEECC------CEECCEEETTSCHHHHHHHHHSCC----CHHHHHH
T ss_pred E---EeeCHHHHHHHHHHhhCCCCEEEEecCCCeeEcCCCC---CCcCCcccCHHHHHHHHHhhccccCCcccCcHHHHH
Confidence 5 346799999999999 999999999999999999999 899999999987766632 35689999
Q ss_pred hhHHHHHhCCCCEEEEeccCCC
Q 020431 187 RTIIPVMRYDIPIVIRNIFNLS 208 (326)
Q Consensus 187 ~a~~~a~~~~I~v~I~n~~~~~ 208 (326)
+|+..+.++|++++|.|+.+|+
T Consensus 238 ~Aa~~a~~~gv~v~I~~g~~p~ 259 (286)
T 3d40_A 238 DALVTCARRGAECFIMRGDPGS 259 (286)
T ss_dssp HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHCCCcEEEEeCCCCC
Confidence 5889999999999999987654
No 24
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=99.83 E-value=3.8e-20 Score=173.10 Aligned_cols=162 Identities=15% Similarity=0.174 Sum_probs=130.5
Q ss_pred hccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCC------CCC----CCCCchhhHHHHHHHhhcCCCcEEEecCc
Q 020431 40 VGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTS------SNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGF 109 (326)
Q Consensus 40 ~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~------~g~----~~~~~~~~~~~i~~~l~~~~~~ipVv~Gf 109 (326)
++.|+. ...++..|.++|++++.+++.+..++.... +|. ..++. +.++++++ .|.|||++|+
T Consensus 112 ~~~G~~--n~~l~~~l~~~g~~a~~l~~~~~~~l~~~~~~~~~d~g~~g~v~~v~~----~~i~~lL~--~g~IpVi~~v 183 (298)
T 2rd5_A 112 VLVGKV--NKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDP----SVLRPLVD--YGYIPVIASV 183 (298)
T ss_dssp HHHHTH--HHHHHHHHHHTTSCEEEEETTGGGCEEEEECTTHHHHBSEEEEEEECG----GGHHHHHH--TTCEEEEESE
T ss_pred HHhchH--HHHHHHHHHhCCCCccccChHHCCEEEEEeCCccccCCcceEEEEECH----HHHHHHHh--CCCEEEEcCe
Confidence 336887 557899999999999999987553332211 221 12333 77888998 8999999998
Q ss_pred cccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcC--Ccccchh
Q 020431 110 IASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHPR 187 (326)
Q Consensus 110 i~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g--~~v~~~~ 187 (326)
+.++.|+..++ ++|++|+.+|.+|+|++++|||||||||++||+ | ++++++++++|+.+++..| .++|.|+
T Consensus 184 -~~~~~G~~~~i---~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~~dp~--~-a~~i~~is~~e~~~~~~~g~~~gGM~~K 256 (298)
T 2rd5_A 184 -AADDSGQAYNI---NADTVAGELAAALGAEKLILLTDVAGILENKED--P-SSLIKEIDIKGVKKMIEDGKVAGGMIPK 256 (298)
T ss_dssp -EECTTSCEEEE---CHHHHHHHHHHHHTCSEEEEEESSSSEESSSSC--T-TSEECEEEHHHHHHHHHTTSSCTTHHHH
T ss_pred -eECCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCCcCeecCCCC--C-CCCcccCCHHHHHHHHHCCCCCCchHHH
Confidence 78888988877 489999999999999999999999999999998 4 8999999999999998654 5789985
Q ss_pred --hHHHHHhCCCC-EEEEeccCCC----------CCceEEeC
Q 020431 188 --TIIPVMRYDIP-IVIRNIFNLS----------VPGIMICR 216 (326)
Q Consensus 188 --a~~~a~~~~I~-v~I~n~~~~~----------~~GT~I~~ 216 (326)
++..+.++|++ ++|.|+..++ ..||.|.+
T Consensus 257 l~aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~i~~ 298 (298)
T 2rd5_A 257 VKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG 298 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEETTSTTHHHHHHHSSSCSEEEEEC
T ss_pred HHHHHHHHHcCCCeEEEecCCCCchHHHHHhcCCCCceEEeC
Confidence 78888999998 9999986543 35888753
No 25
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=99.83 E-value=4.5e-20 Score=164.99 Aligned_cols=146 Identities=25% Similarity=0.302 Sum_probs=117.7
Q ss_pred ChhHHhHhhccchHHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccc
Q 020431 32 TESFTDFVVGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIA 111 (326)
Q Consensus 32 ~~~~~d~i~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~ 111 (326)
++...+.+.+.++.+++.++...++.. + .. ..++. +.++++++ .+.|||++|
T Consensus 58 ~~~~l~~~~~~~~~~~~~l~~~~~~~~-~-------------~~-----~~~~~----~~i~~ll~--~g~ipVi~~--- 109 (219)
T 2ij9_A 58 SETFCDYIGIAATRLNAMLLISAIPSA-A-------------KK-----VPVDF----MEAEELSK--LYRVVVMGG--- 109 (219)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCTTB-C-------------SS-----CCSSH----HHHHHHHT--TCSEEEECC---
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHh-c-------------CC-----CcCCH----HHHHHHHH--CCCEEEEeC---
Confidence 455667777778888888888766542 1 00 11344 77888998 899999998
Q ss_pred cCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhc-CC-----cccc
Q 020431 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYF-GA-----NVLH 185 (326)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~-g~-----~v~~ 185 (326)
|.. .|++|++|+.+|.+++|+++++||||||||++||+++|+++++++++++|+.+++.. |. .+++
T Consensus 110 ----g~~----~~~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~dP~~~~~a~~i~~i~~~e~~~~~~~~g~~~g~~~~~~ 181 (219)
T 2ij9_A 110 ----TFP----GHTTDATAALLAEFIKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRSSAKAGTNVVID 181 (219)
T ss_dssp ----CSS----SSCTHHHHHHHHHHTTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC-----CCCCCSC
T ss_pred ----CCC----CCCchHHHHHHHHHcCCCeEEEeeCCCceecCCCCCCCCCeEeeeeCHHHHHHHHhcCCCCCCCccchH
Confidence 222 246899999999999999999999999999999999999999999999999999754 44 7889
Q ss_pred hhhHHHHHhCCCCEEEEeccCC---------CCCceEE
Q 020431 186 PRTIIPVMRYDIPIVIRNIFNL---------SVPGIMI 214 (326)
Q Consensus 186 ~~a~~~a~~~~I~v~I~n~~~~---------~~~GT~I 214 (326)
+.|++.+.+.+++++|.|+ +| +..||.|
T Consensus 182 ~~a~~~~~~~~~~v~I~~g-~~~~l~~~~~g~~~GT~i 218 (219)
T 2ij9_A 182 LLAAKIIERSKIKTYVILG-TPENIMKAVKGEAVGTVI 218 (219)
T ss_dssp HHHHHHHHHHTCCEEEEEC-CHHHHHHHHTTCCCSEEE
T ss_pred HHHHHHHHHCCCeEEEEEC-CHhHHHHHHcCCCCCeEe
Confidence 9999999999999999997 43 3468877
No 26
>1gs5_A Acetylglutamate kinase; carbamate kinase, amino acid kinase, arginine biosynthesis, phosphoryl group transfer, protein crystallography; HET: NLG ANP; 1.5A {Escherichia coli} SCOP: c.73.1.2 PDB: 1gsj_A* 1oh9_A* 1oha_A* 1ohb_A* 2wxb_A 2x2w_A* 3t7b_A*
Probab=99.82 E-value=4.2e-20 Score=169.27 Aligned_cols=155 Identities=15% Similarity=0.100 Sum_probs=123.7
Q ss_pred chHHHHHHHHHHHHHcCCceEEEcccceeeccCC-------CCCCC-CCCchhhHHHHHHHhhcCCCcEEEecCccccCC
Q 020431 43 GELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPT-------SSNQV-DPDFSESEKRLEKWFSQSPSNTIIATGFIASTP 114 (326)
Q Consensus 43 GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~-------~~g~~-~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~ 114 (326)
++.+++.++ +.|+++|+++..+++.+..+++.. ..|+. .++. +.++++++ .+.|||++|+ +.+.
T Consensus 81 ~~~~n~~l~-~~l~~~G~~a~~l~~~~~~~~~~~~~~~d~~~~g~~~~~~~----~~i~~ll~--~g~ipVi~~~-g~~~ 152 (258)
T 1gs5_A 81 AGTANKTLL-AWAKKHQIAAVGLFLGDGDSVKVTQLDEELGHVGLAQPGSP----KLINSLLE--NGYLPVVSSI-GVTD 152 (258)
T ss_dssp HTHHHHHHH-HHHHHTTCCEEEECTTGGGCEEEEECCGGGBSBEEEEECCC----HHHHHHHH--TTCEEEECSE-EECT
T ss_pred hccchHHHH-HHHHHCCCCeEEEeecCCCEEEEEEcCCCCCCcCceeEECH----HHHHHHHH--CCCEEEEeCC-cCCC
Confidence 456666665 467999999999999886544431 12221 3455 77888998 8999999998 8889
Q ss_pred CCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCC-----cccchhhH
Q 020431 115 DNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGA-----NVLHPRTI 189 (326)
Q Consensus 115 ~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~-----~v~~~~a~ 189 (326)
.|+++++ ++|++|+.+|.+|+|+ +++||||||||++| ++++++++++|+.+++..|. +..++.|+
T Consensus 153 ~g~~~~~---~~D~~Aa~lA~~l~Ad-li~ltdV~Gv~~~d------~~~i~~i~~~e~~~l~~~~~~~gGm~~k~~~a~ 222 (258)
T 1gs5_A 153 EGQLMNV---NADQAATALAATLGAD-LILLSDVSGILDGK------GQRIAEMTAAKAEQLIEQGIITDGMIVKVNAAL 222 (258)
T ss_dssp TSCEEEC---CHHHHHHHHHHHHTCE-EEEEESSSSCBCTT------SCBCCEECHHHHHHHHHTTCSCTHHHHHHHHHH
T ss_pred CCcEEEe---cHHHHHHHHHHHhCCc-EEEEeCCCceECCC------CCCCcccCHHHHHHHHhcCCCCCcHHHHHHHHH
Confidence 9998887 4999999999999999 99999999999975 58999999999999976543 44455688
Q ss_pred HHHHhCCCCEEEEeccCC---------CCCceEEe
Q 020431 190 IPVMRYDIPIVIRNIFNL---------SVPGIMIC 215 (326)
Q Consensus 190 ~~a~~~~I~v~I~n~~~~---------~~~GT~I~ 215 (326)
+++.+.++|++|.|+.+| +..||.|.
T Consensus 223 ~~~~~~~~~v~I~~~~~~~~l~~~~~~~~~GT~i~ 257 (258)
T 1gs5_A 223 DAARTLGRPVDIASWRHAEQLPALFNGMPMGTRIL 257 (258)
T ss_dssp HHHHHHTSCEEEEESSCGGGHHHHHTTCCSSEEEC
T ss_pred HHHHhCCCEEEEecCCCchHHHHHhcCCCCcEEEe
Confidence 888888999999997654 34688874
No 27
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=99.82 E-value=1.2e-19 Score=171.48 Aligned_cols=170 Identities=15% Similarity=0.152 Sum_probs=133.2
Q ss_pred hhHHhHh--hccchHHHHHHHHHHHHHcCCceEEEcccceeeccCC-----CCCCC----CCCchhhHHHHHHHhhcCCC
Q 020431 33 ESFTDFV--VGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPT-----SSNQV----DPDFSESEKRLEKWFSQSPS 101 (326)
Q Consensus 33 ~~~~d~i--~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~-----~~g~~----~~~~~~~~~~i~~~l~~~~~ 101 (326)
+...|.+ ++.|+. ...++..|.++|++++.+++.+..++... .+|.. .++. +.++++++ .|
T Consensus 116 ~~~l~~~~~~~~G~i--n~~l~~~L~~~g~~a~gl~~~~a~~l~a~~~~~~d~g~~g~v~~v~~----~~i~~lL~--~g 187 (321)
T 2v5h_A 116 ADTMEVVEMVLVGRV--NKDIVSRINTTGGRAVGFCGTDGRLVLARPHDQEGIGFVGEVNSVNS----EVIEPLLE--RG 187 (321)
T ss_dssp HHHHHHHHHHHHHTH--HHHHHHHHHHHTCCEEEECTTGGGSEEEEECSSCSSBSBEEEEEECG----GGTHHHHH--TT
T ss_pred HHHHHHHHHHHhChH--HHHHHHHHHhCCCCeeeeChhhccEEEeecCCCccccccceeEEecH----HHHHHHHH--CC
Confidence 3444543 346877 55789999999999999987754322211 12321 1344 67888888 89
Q ss_pred cEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcC-
Q 020431 102 NTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG- 180 (326)
Q Consensus 102 ~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g- 180 (326)
.|||++++ +.++.|+..++ ++|++|+.+|.+|+|++++|+|||||||++||+ +++++++++++|+.+++..|
T Consensus 188 ~IpVi~~v-~~~~~G~~~~i---~~D~~Aa~lA~~l~Ad~LiilTDVdGVy~~dp~---~a~~i~~is~~e~~~l~~~g~ 260 (321)
T 2v5h_A 188 YIPVISSV-AADENGQSFNI---NADTVAGEIAAALNAEKLILLTDTRGILEDPKR---PESLIPRLNIPQSRELIAQGI 260 (321)
T ss_dssp CEEEEESE-EECTTSCEEEC---CHHHHHHHHHHHTTCSEEEEEESSSSCBSSTTC---TTCBCCEEEHHHHHHHHHTTS
T ss_pred CeEEEeCc-eECCCCCEEEe---CHHHHHHHHHHHcCCCEEEEeeCCCceEcCCCC---CCeeeeEEcHHHHHHHHhCCC
Confidence 99999964 88888876544 589999999999999999999999999999998 58999999999999998754
Q ss_pred -Ccccch--hhHHHHHhCCCC-EEEEeccCC----------CCCceEEeCC
Q 020431 181 -ANVLHP--RTIIPVMRYDIP-IVIRNIFNL----------SVPGIMICRP 217 (326)
Q Consensus 181 -~~v~~~--~a~~~a~~~~I~-v~I~n~~~~----------~~~GT~I~~~ 217 (326)
+++|+| +++..|.++|++ ++|.|+..+ +..||.|.+.
T Consensus 261 ~~gGM~~Kl~Aa~~a~~~gv~~v~I~~g~~~~~ll~~l~~~~~~GT~I~~~ 311 (321)
T 2v5h_A 261 VGGGMIPKVDCCIRSLAQGVRAAHIIDGRIPHALLLEIFTDAGIGTMIVGS 311 (321)
T ss_dssp SCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCCCCSEEEEECC
T ss_pred CcCcHHHHHHHHHHHHHcCCCEEEEEeCCCCchHHHHHhcCCCCceEEECC
Confidence 678999 588999999998 999997544 3569999764
No 28
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=99.81 E-value=2.6e-19 Score=165.15 Aligned_cols=124 Identities=15% Similarity=0.166 Sum_probs=100.8
Q ss_pred HHHHHHhhcCCCcEEEecCccccCCCCCccccc---CCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEe
Q 020431 90 KRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK---RDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILR 166 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lg---rggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~ 166 (326)
+.++++++ .+.|||++|+.+.+.....++.| .+++|++|+.+|.+++|+++++||||||||++||+.+|++++++
T Consensus 132 ~~i~~lL~--~g~ipVi~g~~g~~~~~~~~~~g~~~~~~~D~~Aa~lA~~l~Ad~Li~lTDVdGvy~~dP~~~~~a~~i~ 209 (270)
T 2ogx_B 132 SAVPLSLA--EVNAVVFSGMPPYKLWMRPAAEGVIPPYRTDAGCFLLAEQFGCKQMIFVKDEDGLYTANPKTSKDATFIP 209 (270)
T ss_dssp CHHHHHCT--TCCEEEEECSCTTGGGCCCCSSSSSCSSCHHHHHHHHHHHHTCSEEEEEESSSSEESSCSSSCTTCCEES
T ss_pred HHHHHHHh--CCCEEEEeCCccccccccccccccCCCCCcHHHHHHHHHhcCCCEEEEEeCCCcccCCCCCCCCCCeEcc
Confidence 45888888 89999999997755322211222 37899999999999999999999999999999999999999999
Q ss_pred eecHHHHHHHhhcCCcccchhhHHHHHh--CCCCEEEEeccCCC---------CCceEEeC
Q 020431 167 TLSYQEAWEMSYFGANVLHPRTIIPVMR--YDIPIVIRNIFNLS---------VPGIMICR 216 (326)
Q Consensus 167 ~ls~~e~~~l~~~g~~v~~~~a~~~a~~--~~I~v~I~n~~~~~---------~~GT~I~~ 216 (326)
+++++|+.+++..| +++++.+...+.. .+++++|.|+.+|+ ..||.|.+
T Consensus 210 ~i~~~e~~~~~~~g-~~~~ggm~~kl~aa~~~~~v~I~~g~~~~~l~~~l~g~~~GT~i~~ 269 (270)
T 2ogx_B 210 RISVDEMKAKGLHD-SILEFPVLDLLQSAQHVREVQVVNGLVPGNLTRALAGEHVGTIITA 269 (270)
T ss_dssp EEEHHHHHHTTCCC-TTSCHHHHHHHHHCSSCCEEEEEETTSTTHHHHHHTTCCCSEEEEC
T ss_pred eeCHHHHHHHhcCC-CcccHHHHHHHHHhhcCCcEEEEeCCCchHHHHHHcCCCCCeEecC
Confidence 99999999987544 5788777666665 56799999997654 56999864
No 29
>2bty_A Acetylglutamate kinase; N-acetyl-L-glutamate kinase, amino acid kinase, phosphoryl group transfer, arginine metabolism, transferase; HET: ARG NLG; 2.75A {Thermotoga maritima} SCOP: c.73.1.2
Probab=99.81 E-value=2.8e-19 Score=165.89 Aligned_cols=157 Identities=18% Similarity=0.147 Sum_probs=126.9
Q ss_pred ccchHHHHHHHHHHHHHcCCceEEEcccceeeccCC------CCCC----CCCCchhhHHHHHHHhhcCCCcEEEecCcc
Q 020431 41 GHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPT------SSNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFI 110 (326)
Q Consensus 41 ~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~------~~g~----~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi 110 (326)
+.|+. ...++..|+++|++++.+++.+..++... .+|. ..++. +.++++++ .|.|||++|+
T Consensus 98 ~~G~~--~~~l~~~l~~~g~~a~~l~~~~~~~l~~~~~~~~~d~g~~g~v~~~~~----~~i~~ll~--~g~IpVi~~v- 168 (282)
T 2bty_A 98 LVGKI--NKEIVMNLNLHGGRAVGICGKDSKLIVAEKETKHGDIGYVGKVKKVNP----EILHALIE--NDYIPVIAPV- 168 (282)
T ss_dssp HHHTH--HHHHHHHHHTTTCCEEEEETTGGGSEEEEECCTTCCCBSBEEEEEECT----HHHHHHHH--TTCEEEEESE-
T ss_pred HhhHH--HHHHHHHHHhCCCCceecChhhCCEEEEecCCcccCCCcceEEEEecH----HHHHHHHH--CCCEEEECCC-
Confidence 36887 56689999999999999988754332211 1232 12344 78899998 8999999998
Q ss_pred ccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcC--Ccccch--
Q 020431 111 ASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHP-- 186 (326)
Q Consensus 111 ~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g--~~v~~~-- 186 (326)
+.++.|+..++ ++|++|+.+|.+++|+++++||||||||++ | +++++++++|+.+++..| .++|.|
T Consensus 169 ~~~~~G~~~~~---~~D~~Aa~lA~~l~Ad~liilTDVdGvy~~-----~--~~i~~i~~~e~~~~~~~g~~~gGM~~K~ 238 (282)
T 2bty_A 169 GIGEDGHSYNI---NADTAAAEIAKSLMAEKLILLTDVDGVLKD-----G--KLISTLTPDEAEELIRDGTVTGGMIPKV 238 (282)
T ss_dssp EECSSSCEEEC---CHHHHHHHHHHHHTCSEEEEEESSSSCEET-----T--EECCEECHHHHHHHHTTTCSCTTHHHHH
T ss_pred ccCCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCCCCeecC-----c--hhhhhCCHHHHHHHHHcCCCCCcHHHHH
Confidence 88888988877 489999999999999999999999999997 2 899999999999998754 467877
Q ss_pred hhHHHHHhCCCC-EEEEeccCCC----------CCceEEeC
Q 020431 187 RTIIPVMRYDIP-IVIRNIFNLS----------VPGIMICR 216 (326)
Q Consensus 187 ~a~~~a~~~~I~-v~I~n~~~~~----------~~GT~I~~ 216 (326)
+++..+.++|++ ++|.|+..|+ ..||.|.+
T Consensus 239 ~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~ 279 (282)
T 2bty_A 239 ECAVSAVRGGVGAVHIINGGLEHAILLEIFSRKGIGTMIKE 279 (282)
T ss_dssp HHHHHHHHTTCSCEEEEETTSTTHHHHHHSSSSCSSEEECC
T ss_pred HHHHHHHHhCCCeEEEecCCCCchHHHHHhcCCCCceEEEe
Confidence 588999999998 9999976543 46999975
No 30
>3ll5_A Gamma-glutamyl kinase related protein; alternate mevalonate pathway, isopentenyl phsophate kinase, beta-alpha sandwich fold; HET: MSE ADP IPE ATP IP8; 1.99A {Thermoplasma acidophilum} PDB: 3lkk_A*
Probab=99.79 E-value=5.2e-19 Score=161.33 Aligned_cols=145 Identities=16% Similarity=0.161 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCC
Q 020431 45 LWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRD 124 (326)
Q Consensus 45 ~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrg 124 (326)
.++..+ .+.|.++|++++.+++.++... |+. +. +.++++++ .|.|||++|+++.+.+|++.+ +
T Consensus 83 ~ln~~~-v~~l~~~G~~a~~l~~~~~~~~-----g~v--~~----~~i~~ll~--~g~ipVi~~~~~~~~~~~~~~---~ 145 (249)
T 3ll5_A 83 NLDLMV-IDAMIEMGMRPISVPISALRYD-----GRF--DY----TPLIRYID--AGFVPVSYGDVYIKDEHSYGI---Y 145 (249)
T ss_dssp HHHHHH-HHHHHHTTCCEEECCGGGSCBS-----SSB--CC----HHHHHHHH--TTCEEEEECEEEEEETTEEEE---E
T ss_pred HHHHHH-HHHHHHCCCcEEEEcHHHcccc-----cEE--cH----HHHHHHHH--CCCEEEECCCEEEcCCCceee---e
Confidence 444444 4889999999999999888541 333 55 88999998 899999999888776666554 3
Q ss_pred cchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHh--hcCCcccchh--hHHHH-HhCCCCE
Q 020431 125 GSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMS--YFGANVLHPR--TIIPV-MRYDIPI 199 (326)
Q Consensus 125 gsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~--~~g~~v~~~~--a~~~a-~~~~I~v 199 (326)
++|++|+.+|.+++|++++|||||||||++||+.+|+++++++++ +++.... ..+.++|.|+ ++..+ .++|+++
T Consensus 146 ~~D~~Aa~lA~~l~Ad~li~ltdvdGv~~~dp~~~~~a~~i~~i~-~~~~~~~~~~~~tGgM~~Kl~aA~~a~~~~Gv~v 224 (249)
T 3ll5_A 146 SGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDID-TNITFDRVQNDVTGGIGKKFESMVKMKSSVKNGV 224 (249)
T ss_dssp CHHHHHHHHHHHHCCSEEEEEESSSSCBSSCTTTCTTCCBCCEEC-CCC-------------HHHHHHHHHHHTTCTTCE
T ss_pred cHHHHHHHHHHhcCCCEEEEEeCCCccCCCCCCCCCCcEEHHHHH-HHHhcccCCCeeECCHHHHHHHHHHHHHhcCCEE
Confidence 589999999999999999999999999999999999999999994 2222221 2346788885 55555 8899999
Q ss_pred EEEeccCC
Q 020431 200 VIRNIFNL 207 (326)
Q Consensus 200 ~I~n~~~~ 207 (326)
+|.|+..+
T Consensus 225 ~I~~g~~~ 232 (249)
T 3ll5_A 225 YLINGNHP 232 (249)
T ss_dssp EEEETTSG
T ss_pred EEEeCCCh
Confidence 99997543
No 31
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=99.77 E-value=3.6e-18 Score=159.87 Aligned_cols=167 Identities=14% Similarity=0.186 Sum_probs=131.9
Q ss_pred hhHHhHh--hccchHHHHHHHHHHHHHcCCceEEEcccceeeccCC-----------------CCCCC----CCCchhhH
Q 020431 33 ESFTDFV--VGHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNPT-----------------SSNQV----DPDFSESE 89 (326)
Q Consensus 33 ~~~~d~i--~~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~-----------------~~g~~----~~~~~~~~ 89 (326)
+...+.+ ++.|+. ...++..|.++|++++.+++.+..+.... .+|.. .++ .
T Consensus 93 ~~~l~~~~~~~~G~~--~~~l~~~l~~~g~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~----~ 166 (300)
T 2buf_A 93 AATMDVVEMVLGGQV--NKDIVNLINRHGGSAIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVN----V 166 (300)
T ss_dssp HHHHHHHHHHHHHTH--HHHHHHHHHHTTCCEEEEEETGGGCEEEEECCCCCC--------CCCCBSBEEEEEEC----H
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHhCCCCEEEecCCCCCeeeeeeccccccchhhcccccccCCcceeEEEEC----H
Confidence 3444544 446888 88999999999999999987654332111 12221 123 3
Q ss_pred HHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeec
Q 020431 90 KRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLS 169 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls 169 (326)
+.++++++ .|.|||++++ +.++.|+..++ ++|++|+.+|.+++|++++|+|||||||++ +++++++++
T Consensus 167 ~~i~~lL~--~g~IpVi~~v-~~~~~G~~~~i---~~D~~Aa~lA~~l~Ad~li~lTdVdGv~~~------~a~~i~~i~ 234 (300)
T 2buf_A 167 GLLNMLVK--GDFIPVIAPI-GVGSNGESYNI---NADLVAGKVAEALKAEKLMLLTNIAGLMDK------QGQVLTGLS 234 (300)
T ss_dssp HHHHHHHH--TTCEEEEEEE-EECTTSCEEEC---CHHHHHHHHHHHHTCSEEEEEESSSCCBCT------TSCBCCEEC
T ss_pred HHHHHHHH--CCCEEEEcCc-eeCCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEeCCCCeECC------CCcChhhCC
Confidence 78899998 8999999954 77888888766 489999999999999999999999999987 488999999
Q ss_pred HHHHHHHhhcC--Ccccch--hhHHHHHhCCCC-EEEEeccCCC----------CCceEEeCC
Q 020431 170 YQEAWEMSYFG--ANVLHP--RTIIPVMRYDIP-IVIRNIFNLS----------VPGIMICRP 217 (326)
Q Consensus 170 ~~e~~~l~~~g--~~v~~~--~a~~~a~~~~I~-v~I~n~~~~~----------~~GT~I~~~ 217 (326)
++|+.+++..| +++|+| +++..+.++|++ ++|.|+..++ ..||.|.+.
T Consensus 235 ~~e~~~~~~~~~~~ggM~~Kv~aa~~a~~~gv~~v~I~~g~~~~~ll~~~~~~~~~GT~i~~~ 297 (300)
T 2buf_A 235 TEQVNELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLISNR 297 (300)
T ss_dssp HHHHHHHHHTTCSCTTHHHHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHSSTTCCSEEEECC
T ss_pred HHHHHHHHHcCCCCCccHHHHHHHHHHHHhCCCEEEEeeCCCCchHHHHHhcCCCCceEEEeC
Confidence 99999998654 688999 588889999999 9999976543 469999763
No 32
>3l86_A Acetylglutamate kinase; ARGB, amino-acid biosynthesis, arginine biosynthesi binding, nucleotide-binding, transferase; HET: ADP NLG; 2.06A {Streptococcus mutans}
Probab=99.77 E-value=1.1e-18 Score=161.52 Aligned_cols=148 Identities=14% Similarity=0.256 Sum_probs=125.0
Q ss_pred HHHHHHHHHcCCceEEEcccceeeccCCC-----CCC----CCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcc
Q 020431 49 QMLAAVVRKNGIDCKWMDTREVLIVNPTS-----SNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPT 119 (326)
Q Consensus 49 ~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~-----~g~----~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~ 119 (326)
+.+++.|.++|+++..+++.+..+++... |+. .+++. +.|+++++ .|.|||++| ++.+++|+..
T Consensus 117 ~~i~~~L~~~G~~a~~l~g~dg~llta~~~~~~d~g~vG~i~~v~~----~~i~~lL~--~g~IPVi~~-v~~~~~G~~~ 189 (279)
T 3l86_A 117 KNLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYGYVGDVTHINK----RVIEEFLE--NRQIPILAS-LGYSKEGDML 189 (279)
T ss_dssp HHHHHHHHHTTCCEEECSGGGGGTEEEEESCHHHHBSBEEEEEECH----HHHHHHHH--TTCEEEEES-EEECTTSCEE
T ss_pred HHHHHHHHhCCCCEEEEecCcCCEEEeeccCccccCcccccchhhH----HHHHHHHh--CCcEEEECC-cEECCCCCEe
Confidence 77899999999999999999865555432 111 12344 88999998 899999999 7888889888
Q ss_pred cccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcC--Ccccch--hhHHHHHhC
Q 020431 120 TLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFG--ANVLHP--RTIIPVMRY 195 (326)
Q Consensus 120 ~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g--~~v~~~--~a~~~a~~~ 195 (326)
++ ++|++|+.+|.+|+|++++|+|||||||+ +++++++++++|+.+++..| .++|.| +++..|.++
T Consensus 190 ~i---~~D~~Aa~lA~~L~Ad~LiilTDVdGV~~-------d~~~I~~i~~~e~~~l~~~~~~tGGM~~Kl~aa~~a~~~ 259 (279)
T 3l86_A 190 NI---NADYLATAVAVALAADKLILMTNVKGVLE-------NGAVLEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAA 259 (279)
T ss_dssp EC---CHHHHHHHHHHHTTCSEEEEECSSSSCEE-------TTEECCEEEGGGSHHHHHTTSSCTTHHHHHHHHHHHHHT
T ss_pred ec---CHHHHHHHHHHHcCCCEEEEEeCCCcccc-------CCEehhhccHHHHHHHHhCCCCcCcHHHHHHHHHHHHHc
Confidence 77 48999999999999999999999999994 47899999999999997643 578888 588999999
Q ss_pred CCC-EEEEeccCCCCCceEEeC
Q 020431 196 DIP-IVIRNIFNLSVPGIMICR 216 (326)
Q Consensus 196 ~I~-v~I~n~~~~~~~GT~I~~ 216 (326)
|++ +.|.|+++. ||+|..
T Consensus 260 Gv~~v~I~~~~~~---GT~i~~ 278 (279)
T 3l86_A 260 GVGQVLIGDNLLT---GTLITA 278 (279)
T ss_dssp TCSEEEEESSSSC---SEEEEC
T ss_pred CCCEEEEeccCCC---CeEEec
Confidence 998 999999873 999964
No 33
>1e19_A Carbamate kinase-like carbamoylphosphate synthetase; transferase, hyperthermophiles, ADP site, phosphoryl group transfer; HET: ADP; 1.5A {Pyrococcus furiosus} SCOP: c.73.1.1
Probab=99.76 E-value=5.1e-18 Score=159.77 Aligned_cols=119 Identities=17% Similarity=0.137 Sum_probs=98.3
Q ss_pred HHHHHHhhcCCCcEEEecCccc----cCCCCCccccc---CCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCC
Q 020431 90 KRLEKWFSQSPSNTIIATGFIA----STPDNIPTTLK---RDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEA 162 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi~----~~~~g~~~~lg---rggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a 162 (326)
+.++++++ .|.|||++|+.| .+.++ ++| ++++|++|+.+|..++|++++++|||||||++|| .|++
T Consensus 177 ~~i~~lL~--~g~IpV~~Gg~giPi~~~~d~---~~g~~~~~d~D~~Aa~lA~~l~Ad~li~lTdVdGvy~~~p--~~~a 249 (314)
T 1e19_A 177 ETIKKLVE--RGVIVIASGGGGVPVILEDGE---IKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYG--TEKE 249 (314)
T ss_dssp HHHHHHHH--TTCEEECSGGGCEEEEEETTE---EEECCCCCCHHHHHHHHHHHTTCSEEEEEESSSSCEETTT--STTC
T ss_pred HHHHHHHH--CCCEEEEeCCCccCeEECCCC---cceeEEeccHHHHHHHHHHHcCCCEEEEeccCCEEECCCC--CCCC
Confidence 78999998 899999998633 23332 344 3889999999999999999999999999999999 4899
Q ss_pred eEEeeecHHHHHHHhhcC---Ccccchh---hHHHHHhCCCCEEEEec------cCCCCCceEEeC
Q 020431 163 VILRTLSYQEAWEMSYFG---ANVLHPR---TIIPVMRYDIPIVIRNI------FNLSVPGIMICR 216 (326)
Q Consensus 163 ~~i~~ls~~e~~~l~~~g---~~v~~~~---a~~~a~~~~I~v~I~n~------~~~~~~GT~I~~ 216 (326)
+++++++++|+.+++..| .++|.|| |++.+.+.+++++|.|. ++. ..||.|.+
T Consensus 250 ~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~~~~~~~~~v~I~~~~~l~~~~~g-~~GT~i~~ 314 (314)
T 1e19_A 250 QWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHLEKAVEALEG-KTGTQVLP 314 (314)
T ss_dssp EECCEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHTCSEEEEEEGGGHHHHHTT-SSSEEEEC
T ss_pred eECCEECHHHHHHHHhCCCcCCCChHHHHHHHHHHHHhCCCeEEEecHHHHHHHHcC-CCCeEEcC
Confidence 999999999999997644 4789997 66778888999999983 333 47999864
No 34
>3k4o_A Isopentenyl phosphate kinase; small molecule kinase, ATP-binding, transferase, methanocald jannaschii, isopentenyl monophosphate; 2.05A {Methanocaldococcus jannaschii} PDB: 3k4y_A* 3k52_A* 3k56_A*
Probab=99.70 E-value=1.1e-16 Score=147.21 Aligned_cols=146 Identities=14% Similarity=0.090 Sum_probs=112.0
Q ss_pred HHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcchH
Q 020431 49 QMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGSDF 128 (326)
Q Consensus 49 ~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggsD~ 128 (326)
+.+++.|.++|+++..+.+.++.+.+++ ..++. +.++.+++ .+.|||++||++.+.+|++.+ +++|+
T Consensus 101 ~~l~~~l~~~G~~a~~l~~~d~~~~~~g----~~v~~----~~i~~lL~--~g~ipVi~~~~~~~~~g~~~~---~~~D~ 167 (266)
T 3k4o_A 101 NIIIDTLQSYDIPAVSIQPSSFVVFGDK----LIFDT----SAIKEMLK--RNLVPVIHGDIVIDDKNGYRI---ISGDD 167 (266)
T ss_dssp HHHHHHHHTTTCCEEEECGGGTCEESSS----CBCCC----HHHHHHHH--TTCEEEEECEEEEESSSCEEE---ECHHH
T ss_pred HHHHHHHHHCCCcEEEeeHHHcCcccCc----eEecH----HHHHHHHH--CCCEEEEeCCEEEcCCCCeee---eCHHH
Confidence 3478899999999999999998766542 23566 88999998 899999999988888777643 56899
Q ss_pred HHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhh--------cCCcccchh--hHHHHHhCCCC
Q 020431 129 SAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSY--------FGANVLHPR--TIIPVMRYDIP 198 (326)
Q Consensus 129 ~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~--------~g~~v~~~~--a~~~a~~~~I~ 198 (326)
+|+.+|.+|+|+++++|||||||| +||+. +++++.+|+.++.. .+..+|.|+ ++..+.+ +
T Consensus 168 ~Aa~lA~~l~Ad~li~ltdvdGv~-~d~~~------i~~~~~~e~~~l~~~~~~~~~~~~tGGM~~Kv~aa~~a~~---~ 237 (266)
T 3k4o_A 168 IVPYLANELKADLILYATDVDGVL-IDNKP------IKRIDKNNIYKILNYLSGSNSIDVTGGMKYKIEMIRKNKC---R 237 (266)
T ss_dssp HHHHHHHHHTCSEEEEEESSSSSB-SSSSB------CSEECTTTHHHHHHHHHSTTCSCCSSHHHHHHHHHHHTTC---E
T ss_pred HHHHHHHHcCCCEEEEEecCCeEE-eCCee------cCcCCHHHHHHHHHHhccccCCcccCCHHHHHHHHHHHhc---C
Confidence 999999999999999999999999 88764 45555444444432 345678886 3333333 9
Q ss_pred EEEEeccCC---------CCCceEEeCC
Q 020431 199 IVIRNIFNL---------SVPGIMICRP 217 (326)
Q Consensus 199 v~I~n~~~~---------~~~GT~I~~~ 217 (326)
++|.|+..+ +..||.|.+.
T Consensus 238 v~I~~g~~~~~l~~~l~g~~~GT~i~~~ 265 (266)
T 3k4o_A 238 GFVFNGNKANNIYKALLGEVEGTEIDFS 265 (266)
T ss_dssp EEEEETTSTTHHHHHHTTCCCSEEEECC
T ss_pred EEEEeCCCccHHHHHhCCCCCceEEEeC
Confidence 999998644 3569999863
No 35
>2e9y_A Carbamate kinase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=99.68 E-value=4.1e-16 Score=146.85 Aligned_cols=119 Identities=19% Similarity=0.233 Sum_probs=95.1
Q ss_pred HHHHHHhhcCCCcEEEecCcc----ccCCCCC----cccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCC
Q 020431 90 KRLEKWFSQSPSNTIIATGFI----ASTPDNI----PTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSE 161 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi----~~~~~g~----~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~ 161 (326)
+.++++++ .|.|||++|+- +.+++|. ..++ ++|++|+.+|.+|+|+.++|+|||||||+ ||+ .|+
T Consensus 177 ~~i~~lL~--~g~IpI~~g~~g~pv~~~~~g~~~g~~~~i---d~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp~-~p~ 249 (316)
T 2e9y_A 177 DLIAEASA--ESPAVVALGGGGVPVVERPGGVLEPVEAVV---DKDLASSLLATQLNADLLVILTDVPGVAV-NYG-REG 249 (316)
T ss_dssp HHHHHHHH--HCSEEEECGGGCEEEEECTTSCEEECSCCC---CHHHHHHHHHHHTTCSEEEEEESSSSCEE-TTT-STT
T ss_pred HHHHHHHH--CCCEEEEECCCCCCeeECCCCCeecceeee---CHHHHHHHHHHHcCCCEEEEEeCchHhhC-CCC-CCC
Confidence 78999998 89999998753 3356663 2222 58999999999999999999999999999 885 689
Q ss_pred CeEEeeecHHHHHHHhhc---CCcccchh--hHHHHHhCCC-CEEEEecc------CCCCCceEEeC
Q 020431 162 AVILRTLSYQEAWEMSYF---GANVLHPR--TIIPVMRYDI-PIVIRNIF------NLSVPGIMICR 216 (326)
Q Consensus 162 a~~i~~ls~~e~~~l~~~---g~~v~~~~--a~~~a~~~~I-~v~I~n~~------~~~~~GT~I~~ 216 (326)
++++++++++|+.+++.. +.++|.|+ ++..+.++|+ ++.|.|.. +. ..||.|.+
T Consensus 250 a~~i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~v~I~~~~~l~~~l~g-~~GT~i~~ 315 (316)
T 2e9y_A 250 ERWLRRAAASELKKYLREGHFPPGSMGPKVEAAISFVERTGKPAVIGSLEEARQVLSL-QAGTVVML 315 (316)
T ss_dssp CEECSEEEHHHHHHHHHTTCSCTTTHHHHHHHHHHHHHHHCSCEEEEESTTHHHHHTT-SSSEEEEC
T ss_pred CcCCcEEcHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEECcHHHHHHHHcC-CCCeEEec
Confidence 999999999999999763 44678885 6667778899 78887632 22 46898864
No 36
>3zzh_A Acetylglutamate kinase; transferase, arginine biosynthesis; HET: ARG NLG; 2.10A {Saccharomyces cerevisiae} PDB: 3zzg_A 3zzf_A*
Probab=99.65 E-value=1.2e-15 Score=142.68 Aligned_cols=166 Identities=14% Similarity=0.124 Sum_probs=123.3
Q ss_pred hHHhHhh-ccchHHHHHHHHHHHHHcCCceEEEcccceeeccC-C--CCC---C-CCCCchhhHHHHHHHhhcCCCcEEE
Q 020431 34 SFTDFVV-GHGELWSAQMLAAVVRKNGIDCKWMDTREVLIVNP-T--SSN---Q-VDPDFSESEKRLEKWFSQSPSNTII 105 (326)
Q Consensus 34 ~~~d~i~-~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~-~--~~g---~-~~~~~~~~~~~i~~~l~~~~~~ipV 105 (326)
+..+.+. +.|+ ++ ..+++.|.++|++|+++++.-+ .... + .+| + .++|. +.|+.+++ .|.|||
T Consensus 114 ~~l~vv~m~~~~-vn-~~lv~~L~~~G~~Av~l~gg~~-~a~~~~~~d~g~~G~i~~v~~----~~i~~lL~--~g~IpV 184 (307)
T 3zzh_A 114 HTMAVVRKCFLE-QN-LKLVTALEQLGVRARPITSGVF-TADYLDKDKYKLVGNIKSVTK----EPIEASIK--AGALPI 184 (307)
T ss_dssp HHHHHHHHHHHH-HH-HHHHHHHHHTTCCEEEECSSSE-EEEESCHHHHBSBEEEEEECC----HHHHHHHH--HTCEEE
T ss_pred HHHHHHHHHHHH-HH-HHHHHHHHhCCCCeeEEcCCcE-EEEecCccccCccccccccCH----HHHHHHHH--CCCEEE
Confidence 4444432 3464 44 6668999999999999987422 2210 0 122 2 24666 88999998 899999
Q ss_pred ecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHH-HHHHhhc--CCc
Q 020431 106 ATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQE-AWEMSYF--GAN 182 (326)
Q Consensus 106 v~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e-~~~l~~~--g~~ 182 (326)
++|+ +.+.+|++.++ ++|++|+.+|.+|+|++++|+|||||||++ |++++++++++.| +.++... +.+
T Consensus 185 i~~~-g~~~~G~~~~i---~~D~~A~~lA~~L~Ad~Li~lTdV~GV~~~-----~~~~~i~~i~~~e~~~~l~~~~~~tG 255 (307)
T 3zzh_A 185 LTSL-AETASGQMLNV---NADVAAGELARVFEPLKIVYLNEKGGIING-----STGEKISMINLDEEYDDLMKQSWVKY 255 (307)
T ss_dssp ECCC-EECTTCBEEBC---CHHHHHHHHHHHHCCSEEEEECSSCSCEET-----TTTEECCEEEHHHHHHHHHTSTTSCH
T ss_pred EeCC-eECCCCcEEec---CHHHHHHHHHHhCCCCEEEEEeCCcceecC-----CCCcCCcccCHHHHHHHHHhCCCCCC
Confidence 9998 77888988876 489999999999999999999999999986 5789999999976 5677654 357
Q ss_pred ccchh--hHHHHHhC---CCCEEEEecc-------CCCCCceEEeCC
Q 020431 183 VLHPR--TIIPVMRY---DIPIVIRNIF-------NLSVPGIMICRP 217 (326)
Q Consensus 183 v~~~~--a~~~a~~~---~I~v~I~n~~-------~~~~~GT~I~~~ 217 (326)
+|.|+ +++.|.+. +.++.|.+.. ..+..||.|.+.
T Consensus 256 GM~~Kl~aa~~a~~~v~~g~~v~I~~~~~ll~elft~~g~GT~I~~~ 302 (307)
T 3zzh_A 256 GTKLKIREIKELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRG 302 (307)
T ss_dssp HHHHHHHHHHHHHHHSCTTCCEEEECGGGHHHHHHSCCCCSEEEECC
T ss_pred cHHHHHHHHHHHHHHhccCeEEEEeCccHHHHHHhcCCCCcEEEecC
Confidence 88886 34444443 7889998742 345679999763
No 37
>3d2m_A Putative acetylglutamate synthase; protein-COA-Glu ternary complex, transferase; HET: COA GLU; 2.21A {Neisseria gonorrhoeae} PDB: 2r8v_A* 3b8g_A* 2r98_A* 3d2p_A*
Probab=99.63 E-value=1.7e-15 Score=149.27 Aligned_cols=157 Identities=15% Similarity=0.111 Sum_probs=120.5
Q ss_pred cchHHHHHHHHHHHHHcCCce----EEEcccceeeccCCC--------CCC----CCCCchhhHHHHHHHhhcCCCcEEE
Q 020431 42 HGELWSAQMLAAVVRKNGIDC----KWMDTREVLIVNPTS--------SNQ----VDPDFSESEKRLEKWFSQSPSNTII 105 (326)
Q Consensus 42 ~GE~~s~~~~~~~L~~~Gi~a----~~l~~~~~~~~~~~~--------~g~----~~~~~~~~~~~i~~~l~~~~~~ipV 105 (326)
.|+. ...+.+.|. +|+++ +.+++.+..+.+... +|. ..++. +.|+++++ .|.|||
T Consensus 119 ~G~~--~~~l~~~l~-~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~d~g~~g~v~~v~~----~~i~~lL~--~g~ipI 189 (456)
T 3d2m_A 119 AGTV--RSRFEAALC-GSVSGFARAPSVPLVSGNFLTARPIGVIDGTDMEYAGVIRKTDT----AALRFQLD--AGNIVW 189 (456)
T ss_dssp HHHH--HHHHHHHHH-TC--------CCCEECCSCEEEEECCEETTEECBTBEEEEEECH----HHHHHHHH--TTCEEE
T ss_pred HhHH--HHHHHHHHh-cccccCCCccceeeccCcEEEEEEcccccCcccCceeeEEEECH----HHHHHHHH--CCCeEE
Confidence 4644 345677888 99998 777776643333211 121 12333 88999998 899999
Q ss_pred ecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHHHHHHhhcCCcccc
Q 020431 106 ATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQEAWEMSYFGANVLH 185 (326)
Q Consensus 106 v~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e~~~l~~~g~~v~~ 185 (326)
++++ +.+..|+..++ ++|++|+.+|.+++|+.++|+|||||||++ +++++++++++|+.+++..|.++|.
T Consensus 190 i~~~-~~~~~g~~~~~---~~D~~Aa~lA~~l~Ad~li~lTdvdGv~~~------~~~~i~~i~~~e~~~~~~~g~ggm~ 259 (456)
T 3d2m_A 190 MPPL-GHSYGGKTFNL---DMVQAAASVAVSLQAEKLVYLTLSDGISRP------DGTLAETLSAQEAQSLAEHAASETR 259 (456)
T ss_dssp ECSE-EECTTSCEEEC---CHHHHHHHHHHHHTCSEEEEEESSSSCBCT------TSCBCSEEEHHHHHHHHTTCCHHHH
T ss_pred ECCc-ccCCCCCEEEE---CHHHHHHHHHHHcCCCEEEEEECCccccCC------CCCccccCCHHHHHHHHhccCCChH
Confidence 9997 77888988876 489999999999999999999999999986 6889999999999999877779999
Q ss_pred h--hhHHHHHhCCCC-EEEEeccCC----------CCCceEEeCC
Q 020431 186 P--RTIIPVMRYDIP-IVIRNIFNL----------SVPGIMICRP 217 (326)
Q Consensus 186 ~--~a~~~a~~~~I~-v~I~n~~~~----------~~~GT~I~~~ 217 (326)
| +++..|.++|++ +.|.|+..| +..||.|.+.
T Consensus 260 ~Kl~aa~~a~~~gv~~v~I~~~~~~~~ll~~l~~~~~~GT~i~~~ 304 (456)
T 3d2m_A 260 RLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIAKE 304 (456)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSTTHHHHHHHCSSCSSEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEEecCcCCchHHHHHHhhcCCceeeecc
Confidence 9 588888899996 999997432 3569999765
No 38
>4ab7_A Protein Arg5,6, mitochondrial; transferase, arginine biosynthesis, amino acid kinase domain GCN5-related acetyltransferase, GNAT; HET: NLG; 3.25A {Saccharomyces cerevisiae} PDB: 3zzi_A*
Probab=99.60 E-value=1.7e-14 Score=141.64 Aligned_cols=158 Identities=14% Similarity=0.141 Sum_probs=121.7
Q ss_pred cchHHHHHHHHHHHHHcCCceEEEcccceeecc---CCCCC---C-CCCCchhhHHHHHHHhhcCCCcEEEecCccccCC
Q 020431 42 HGELWSAQMLAAVVRKNGIDCKWMDTREVLIVN---PTSSN---Q-VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTP 114 (326)
Q Consensus 42 ~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~---~~~~g---~-~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~ 114 (326)
.|+ + .+.+++.|.++|++|+++.+.-+ ... ...+| + ..++. +.|+.+++ .|.|||++|+ +.+.
T Consensus 123 ~~~-v-n~~lv~~L~~~G~~Avglsgg~~-~a~~~~~~d~g~vG~I~~v~~----~~I~~lL~--~G~IPVi~~~-g~~~ 192 (464)
T 4ab7_A 123 FLE-Q-NLKLVTALEQLGVRARPITSGVF-TADYLDKDKYKLVGNIKSVTK----EPIEASIK--AGALPILTSL-AETA 192 (464)
T ss_dssp HHH-H-HHHHHHHHHHTTCCEEEECSSSE-EEEESCTTTTBSBEEEEEECC----HHHHHHHH--TTCEEEEESE-EECT
T ss_pred HHH-H-HHHHHHHHHhCCCCeEEECCCcE-EEEecCccccCCcCcccccCH----HHHHHHHH--CCcEEEEcCC-cCCC
Confidence 354 3 46678999999999999987332 221 11223 2 24666 88999998 8999999997 8888
Q ss_pred CCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHHH-HHHHhhc--CCcccchh--hH
Q 020431 115 DNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQE-AWEMSYF--GANVLHPR--TI 189 (326)
Q Consensus 115 ~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~e-~~~l~~~--g~~v~~~~--a~ 189 (326)
+|++.++ ++|++|+.+|.+|+|++++++|||||||++ |++++++++++.| +.++... +.++|.|+ ++
T Consensus 193 ~G~~~ni---~~D~~Aa~lA~~L~Ad~Li~lTdV~GV~~~-----~~~~lI~~it~~e~~~~li~~~~~tgGM~pKl~aa 264 (464)
T 4ab7_A 193 SGQMLNV---NADVAAGELARVFEPLKIVYLNEKGGIING-----STGEKISMINLDEEYDDLMKQSWVKYGTKLKIREI 264 (464)
T ss_dssp TCBEEEC---CHHHHHHHHHHHHCCSEEEEEESSCSEECT-----TTCCEECEEEHHHHHHHHHTCSSCCHHHHHHHHHH
T ss_pred CCCEEEe---cHHHHHHHHHHHcCCCEEEEEecccccccC-----CCCcCCcccCHHHHHHHHHhcCCCCCcHHHHHHHH
Confidence 8988876 489999999999999999999999999986 4789999999976 5667654 35789996 55
Q ss_pred HHHHhC---CCCEEEEecc-------CCCCCceEEeCC
Q 020431 190 IPVMRY---DIPIVIRNIF-------NLSVPGIMICRP 217 (326)
Q Consensus 190 ~~a~~~---~I~v~I~n~~-------~~~~~GT~I~~~ 217 (326)
+.|.+. +.++.|.+.. ..+..||.|.+.
T Consensus 265 ~aa~~~v~~g~~v~I~~~~~ll~eLft~~g~GT~I~~~ 302 (464)
T 4ab7_A 265 KELLDYLPRSSSVAIINVQDLQKELFTDSGAGTMIRRG 302 (464)
T ss_dssp HHHHTTSCTTCEEEEEESTTHHHHTTSSSTTSEEEECC
T ss_pred HHHHHhcccCcEEEEecChHHHHHHhcCCCCceEEecC
Confidence 566554 7788888742 345679999876
No 39
>2we5_A Carbamate kinase 1; arginine catabolism, arginine metabolism, ATP synthesys, open alpha/beta sheet, phosphotransferase, transferase; HET: ADP; 1.39A {Enterococcus faecalis} PDB: 1b7b_A 2we4_A*
Probab=99.60 E-value=3.5e-15 Score=140.16 Aligned_cols=119 Identities=16% Similarity=0.197 Sum_probs=94.9
Q ss_pred HHHHHHhhcCCCcEEEecCccccC-----CCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeE
Q 020431 90 KRLEKWFSQSPSNTIIATGFIAST-----PDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVI 164 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi~~~-----~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~ 164 (326)
+.++++++ .|.|||++|+.|.. ..|+..+ +++|++|+.+|.+++|++++|+|||||||+ || ..|++++
T Consensus 173 ~~i~~lL~--~g~IpIi~Gg~Gipv~~~~~~g~~~~---~~~D~~Aa~lA~~l~Ad~LiilTdVdGVy~-dp-~~~~a~~ 245 (310)
T 2we5_A 173 ETINTLIK--NDIITISCGGGGIPVVGQELKGVEAV---IDKDFASEKLAELVDADALVILTGVDYVCI-NY-GKPDEKQ 245 (310)
T ss_dssp HHHHHHHH--TTCEEECCGGGCEEEETTTTEECCCC---CCHHHHHHHHHHHTTCSEEEEECSCSSCEE-ST-TSTTCEE
T ss_pred HHHHHHHH--CCCEEEEECCCCCCCcCCCCCCcEee---cCHHHHHHHHHHHcCCCEEEEEeCchHhhC-CC-CCCCCeE
Confidence 88999998 89999999874421 2233333 358999999999999999999999999999 88 4789999
Q ss_pred EeeecHHHHHHHhhcC---Ccccchh--hHHHHHhCCC--CEEEEec------cCCCCCceEEe
Q 020431 165 LRTLSYQEAWEMSYFG---ANVLHPR--TIIPVMRYDI--PIVIRNI------FNLSVPGIMIC 215 (326)
Q Consensus 165 i~~ls~~e~~~l~~~g---~~v~~~~--a~~~a~~~~I--~v~I~n~------~~~~~~GT~I~ 215 (326)
+++++++|+.+++..| .++|.|+ ++..+.+.|+ +++|.+. +..+..||.|.
T Consensus 246 i~~i~~~e~~~~~~~g~~~~GgM~~Kv~aa~~a~~~gv~~~v~I~~~~~l~~~l~g~~~GT~i~ 309 (310)
T 2we5_A 246 LTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQPNKQAIITSLENLGSMSGDEIVGTVVT 309 (310)
T ss_dssp CCEEEHHHHHHHHHTTCSCTTTTHHHHHHHHHHHHHSTTCEEEEECSGGGGGCBTTBCCSEEEE
T ss_pred CCEEcHHHHHHHhhCCCCCCCChHHHHHHHHHHHHcCCCceEEECcHHHHHHHHcCCCCCeEEe
Confidence 9999999999997643 4778885 7777788898 7888752 23335688874
No 40
>3kzf_A Carbamate kinase; arginine dihydrolase pathway, giardia LAMB target, transferase; 3.00A {Giardia lamblia atcc 50803}
Probab=99.56 E-value=1.5e-14 Score=134.90 Aligned_cols=122 Identities=14% Similarity=0.128 Sum_probs=95.0
Q ss_pred HHHHHHhhcCCCcEEEecCcccc---CCCCCcc-cccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEE
Q 020431 90 KRLEKWFSQSPSNTIIATGFIAS---TPDNIPT-TLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVIL 165 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gfi~~---~~~g~~~-~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i 165 (326)
+.|+.+|+ .|.|||++|+.|. ++++..+ +...+++|++|+.+|..|+|+.++|+|||||||+ ||+ .|+++++
T Consensus 179 ~~I~~LL~--~G~IvI~aGGgGiPv~~~~~~~~G~~~~id~D~~Aa~lA~~L~AD~LIiLTDVdGVy~-dp~-~p~a~~I 254 (317)
T 3kzf_A 179 GVIKTLID--NNVLVICTNGGGIPCKRENKVISGVDAVIDKDLATSLLAKTLNSDYLMILTDVLNACI-NYK-KPDERKL 254 (317)
T ss_dssp HHHHHHHH--TTCEEECCGGGCEEEEECSSCEEECSCCCCHHHHHHHHHHHHTCSCEEECCSSSSCEE-SSS-CSSCEEC
T ss_pred HHHHHHHH--CCCEEEEeCCCCCCcccCCCcccceEEeccHHHHHHHHHHHhCCCEEEEecCCCeeeC-CCC-CCCCeEC
Confidence 78888998 8999999877554 2333332 3335679999999999999999999999999999 999 5899999
Q ss_pred eeecHHHHHHHhhc---CCcccchh--hHHH-HHhCCCCEEEEecc------CCCCCceEEeC
Q 020431 166 RTLSYQEAWEMSYF---GANVLHPR--TIIP-VMRYDIPIVIRNIF------NLSVPGIMICR 216 (326)
Q Consensus 166 ~~ls~~e~~~l~~~---g~~v~~~~--a~~~-a~~~~I~v~I~n~~------~~~~~GT~I~~ 216 (326)
++++++|+.++... +.+.|.|+ ++.. +.+.+.++.|.|.. +.+ .||.|.+
T Consensus 255 ~~it~~e~~~li~~g~~~~GGM~pKl~AA~~av~~gg~~v~I~s~~~l~~~l~G~-~GT~I~~ 316 (317)
T 3kzf_A 255 EEIKLSEILALEKDGHFAAGSMGPKVRAAIEFTQATGKMSIITSLSTAVDALNGK-CGTRIIK 316 (317)
T ss_dssp CEEEHHHHHHHHTTTSCC--CCHHHHHHHHHHHHHHCCCEEECCGGGHHHHHTTS-SSEEEEC
T ss_pred cCcCHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHcCCCeEEEcchHHHHHHHCCC-CCeEEec
Confidence 99999999998753 34688885 4444 45556789999864 333 6999976
No 41
>3s6g_A N-acetylglutamate kinase / N-acetylglutamate SYNT; synthase, transferase; HET: COA; 2.67A {Maricaulis maris} PDB: 3s7y_A 3s6h_A*
Probab=99.54 E-value=5e-14 Score=138.47 Aligned_cols=158 Identities=13% Similarity=0.105 Sum_probs=119.2
Q ss_pred cchHHHHHHHHHHHHHcCCceEEEccccee--eccCCCCCC----CCCCchhhHHHHHHHhhcCCCcEEEecCccccCCC
Q 020431 42 HGELWSAQMLAAVVRKNGIDCKWMDTREVL--IVNPTSSNQ----VDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPD 115 (326)
Q Consensus 42 ~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~~--~~~~~~~g~----~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~ 115 (326)
.| .++ ..+++.|.++|++|+++.+..+. ..++..+|. ..++. +.|+.+++ .|.|||++++ +.+..
T Consensus 133 lg-~vn-~~lv~aL~~~G~~Av~lsg~~~~a~~~~~~d~g~~G~I~~v~~----~~i~~lL~--~g~IpVi~p~-g~~~~ 203 (460)
T 3s6g_A 133 LT-QAN-LALVDAIRDAGGRAAAVPRGVFEADIVDADKLGRVGEPRHIHL----DLVGSAAR--AGQAAILACL-GETPD 203 (460)
T ss_dssp HH-HHH-HHHHHHHHHTTCCEEEECSSSEEEEESCTTTTBSEEEEEEECC----HHHHHHHH--TTCEEEEECE-EECTT
T ss_pred HH-HHH-HHHHHHHHhCCCCceEEecCeEEEEEecCcccCccCcceEEcH----HHHHHHHH--CCcEEEEECc-eECCC
Confidence 46 555 44556999999999999985441 112223332 24666 88999998 8999999986 77888
Q ss_pred CCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHH-HHHHHhhc--CCcccchh--hHH
Q 020431 116 NIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQ-EAWEMSYF--GANVLHPR--TII 190 (326)
Q Consensus 116 g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~-e~~~l~~~--g~~v~~~~--a~~ 190 (326)
|+..++ ++|.+|+.+|.+|+|++++++|||||||++ +++++++++.. |+.++... +.++|.|+ ++.
T Consensus 204 G~~~~i---~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~------~~~lI~~i~~~~e~~~l~~~~~~tGGM~~Kl~aa~ 274 (460)
T 3s6g_A 204 GTLVNI---NADVAVRALVHALQPYKVVFLTGTGGLLDE------DGDILSSINLATDFGDLMQADWVNGGMRLKLEEIK 274 (460)
T ss_dssp CCEEEE---CHHHHHHHHHHHHCCSEEEEECSSCSCBCT------TSSBCCEEEHHHHHHHHHHCSSSCHHHHHHHHHHH
T ss_pred CcEEec---CHHHHHHHHHHHcCCCEEEEEeCCccccCC------CCeecceeCcHHHHHHHHhcCCCCCcHHHHHHHHH
Confidence 988876 489999999999999999999999999984 47899999986 78888764 35788885 666
Q ss_pred HHHhCCCCEEEEecc----------CCCCCceEEeCC
Q 020431 191 PVMRYDIPIVIRNIF----------NLSVPGIMICRP 217 (326)
Q Consensus 191 ~a~~~~I~v~I~n~~----------~~~~~GT~I~~~ 217 (326)
.+.+...++.+.++. ..+..||.|.+.
T Consensus 275 ~a~~gv~~v~iv~g~~~~~Ll~eLft~~g~GT~i~~~ 311 (460)
T 3s6g_A 275 RLLDDLPLSSSVSITRPSELARELFTHAGSGTLIRRG 311 (460)
T ss_dssp HHHHTSCTTCEEEEECGGGHHHHHHSSCCSSEEEECC
T ss_pred HHHhCCCcEEEEEeCCCcHHHHHHhcCCCCceEEEcC
Confidence 666643246666653 234579999875
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=99.51 E-value=2.6e-14 Score=125.77 Aligned_cols=126 Identities=20% Similarity=0.169 Sum_probs=92.1
Q ss_pred CcccchhhHHHHHhCCCCEEEEeccCCCC-Cce-EEe--CCCCCCCcc---hhh--ccCCeeeEEeecCeEEEEEecCCC
Q 020431 181 ANVLHPRTIIPVMRYDIPIVIRNIFNLSV-PGI-MIC--RPPVDENED---EQI--IDSPVKGFATIDNLALVNVEGTGM 251 (326)
Q Consensus 181 ~~v~~~~a~~~a~~~~I~v~I~n~~~~~~-~GT-~I~--~~~~~~~~~---~~~--~~~~v~~I~~~~~ia~IsivG~~~ 251 (326)
..++-.+.+..+.++||.+-++.+...+. .++ .+. ....+.... ... ..-....+.+.+++|+|++||.+|
T Consensus 46 ~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~~~~~~~l~~~~~~~~~~~v~~~~~iakVSvVG~GM 125 (200)
T 4go7_X 46 IPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDSLRNEIGFSQLLYDDHIGKVSLIGAGM 125 (200)
T ss_dssp STTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGHHHHHHHHHTTHHHHCCSEEEEECCEEEEEEEEESC
T ss_pred CccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhHHHHHHHHHHHHhhhceeeEEEecCeeeeeeecccc
Confidence 34555567888888999877766543221 222 221 110000000 000 111356789999999999999999
Q ss_pred CCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHHh
Q 020431 252 AGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREAL 308 (326)
Q Consensus 252 ~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~~ 308 (326)
++.||+++|+|++|++.||||.||+ +||.+|||+|+++|.++|+++||++|++.-
T Consensus 126 ~~~~GVaak~F~aLa~~~INI~mIs--tSEi~IS~vV~~~d~~~Av~aLH~~F~L~~ 180 (200)
T 4go7_X 126 RSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGLGG 180 (200)
T ss_dssp TTCHHHHHHHHHHHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHHTC--
T ss_pred ccCCCcHHHHHHHHHHCCCCEEEEE--ccCCEEEEEEeHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999 899999999999999999999999997653
No 43
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=99.47 E-value=6e-14 Score=118.99 Aligned_cols=120 Identities=17% Similarity=0.142 Sum_probs=85.1
Q ss_pred ccchhhHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchhhccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHH
Q 020431 183 VLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIF 262 (326)
Q Consensus 183 v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~~~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if 262 (326)
++..+.+..+.++||++...++... .=+...++...-....+.. .....+++.+++++|+++|.+|++.||+++++|
T Consensus 33 g~~~~if~~La~~~I~vd~I~~s~~--~Isf~v~~~~~~~~il~~l-~~~~~v~~~~~~a~vsvvG~gm~~~~gv~a~~f 109 (157)
T 3mah_A 33 HFMRKLFEIFEFYQEPVDMVATSEV--GVSLTIDNDKNLPDIVRAL-SDIGDVTVDKDMVIICIVGDMEWDNVGFEARII 109 (157)
T ss_dssp HHHHHHHHHHHHTTCCCSCEECCSS--EEEEEESCCTTHHHHHHHH-TTTEEEEEEEEEEEEEEEC------CCHHHHHH
T ss_pred hHHHHHHHHHHHcCCCEEEEEecCC--EEEEEECChHHHHHHHHHH-hccCeEEEeCCeEEEEEECCCcccCccHHHHHH
Confidence 3445667888899998777665421 1122223211000011111 225788999999999999999999999999999
Q ss_pred HHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHH
Q 020431 263 GAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (326)
Q Consensus 263 ~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~ 307 (326)
++|+ ||||.||+|++|+.+|+|+|+++|.+++++.||++|+..
T Consensus 110 ~aL~--~Ini~~isqg~Se~~is~vv~~~d~~~a~~~Lh~~f~~~ 152 (157)
T 3mah_A 110 NALK--GVPVRMISYGGSNYNVSVLVKAEDKKKALIALSNKLFNS 152 (157)
T ss_dssp HTTT--TSCCSEEEECSSSSCEEEEEEGGGHHHHHHHHHHHHHC-
T ss_pred HHhC--CCCeEEEeeCCCCCEEEEEEcHHHHHHHHHHHHHHHhcc
Confidence 9999 999999999999999999999999999999999999864
No 44
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=99.44 E-value=5.2e-13 Score=115.51 Aligned_cols=127 Identities=21% Similarity=0.271 Sum_probs=95.3
Q ss_pred CcccchhhHHHHHhCCCC--EEEEeccCCCCCceEEeCCCC--CCC---cchhh--ccCCeeeEEeecCeEEEEEecCCC
Q 020431 181 ANVLHPRTIIPVMRYDIP--IVIRNIFNLSVPGIMICRPPV--DEN---EDEQI--IDSPVKGFATIDNLALVNVEGTGM 251 (326)
Q Consensus 181 ~~v~~~~a~~~a~~~~I~--v~I~n~~~~~~~GT~I~~~~~--~~~---~~~~~--~~~~v~~I~~~~~ia~IsivG~~~ 251 (326)
..++-.+.+.++.++||+ +...|.++|+..+|.|+-.-. +.. ...+. ....++.+...+++++|+++|.+|
T Consensus 26 ~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d~~~a~~~l~~~~~~~~~~~v~~~~~~a~VsvVG~gm 105 (178)
T 2dtj_A 26 KPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQVGKVSLVGAGM 105 (178)
T ss_dssp STTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHHHHHHHHHHTTTTTTTCSEEEEESCEEEEEEEEECC
T ss_pred CccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccccHHHHHHHHHHHHHhcCCCeEEEeCCeEEEEEEcCCc
Confidence 345556678888999965 555565555444566641100 000 00000 112356789999999999999999
Q ss_pred CCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHHhc
Q 020431 252 AGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREALN 309 (326)
Q Consensus 252 ~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~~~ 309 (326)
++.||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|++.||++|+.+..
T Consensus 106 ~~~~Gv~arif~aLa~~~InI~~is--tSe~~Is~vV~~~d~~~Av~~Lh~~F~l~~~ 161 (178)
T 2dtj_A 106 KSHPGVTAEFMEALRDVNVNIELIS--TSEIRISVLIREDDLDAAARALHEQFQLGGE 161 (178)
T ss_dssp TTCHHHHHHHHHHHHHTTCCCCEEE--EETTEEEEEEEGGGHHHHHHHHHHHHTCCSS
T ss_pred ccCccHHHHHHHHHHHCCCCEEEEE--cCCCeEEEEEeHHHHHHHHHHHHHHHccCCC
Confidence 9999999999999999999999998 7899999999999999999999999986543
No 45
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=99.43 E-value=2.2e-13 Score=118.32 Aligned_cols=125 Identities=21% Similarity=0.228 Sum_probs=94.7
Q ss_pred CCcccchhhHHHHHhCCCCEEEEeccCCCC-Cc-eEEe---CCCCCCCcc---hhhc--cCCeeeEEeecCeEEEEEecC
Q 020431 180 GANVLHPRTIIPVMRYDIPIVIRNIFNLSV-PG-IMIC---RPPVDENED---EQII--DSPVKGFATIDNLALVNVEGT 249 (326)
Q Consensus 180 g~~v~~~~a~~~a~~~~I~v~I~n~~~~~~-~G-T~I~---~~~~~~~~~---~~~~--~~~v~~I~~~~~ia~IsivG~ 249 (326)
+..++..+.+..+.++||++....+..++. .| +.|+ +... .... .+.. .-.+..+.+.+++++|+++|.
T Consensus 26 ~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~-~~~a~~~L~~~~~el~~~~v~~~~~va~VsvVG~ 104 (181)
T 3s1t_A 26 DIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDV-GPAAVEKLDSLRNEIGFSQLLYDDHIGKVSLIGA 104 (181)
T ss_dssp SSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTT-HHHHHHHHHHTHHHHCCSEEEEESCEEEEEEEEE
T ss_pred CCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhH-HHHHHHHHHHHHHhcCcceEEEeCCEEEEEEEec
Confidence 445566677888899999977776544331 23 2332 2111 0000 0000 113567889999999999999
Q ss_pred CCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHH
Q 020431 250 GMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (326)
Q Consensus 250 ~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~ 307 (326)
+|++.||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|++.||+.|+..
T Consensus 105 gm~~~~Gvaa~~f~aLa~~~InI~~Is--tSei~Is~vV~~~d~~~Av~aLH~~f~l~ 160 (181)
T 3s1t_A 105 GMRSHPGVTATFCEALAAVGVNIELIS--TSEIRISVLCRDTELDKAVVALHEAFGLG 160 (181)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCCCEEE--EETTEEEEEEEGGGHHHHHHHHHHHHTCC
T ss_pred ccccCchHHHHHHHHHHHCCCcEEEEE--cCCCEEEEEEeHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999 78999999999999999999999999764
No 46
>3s6k_A Acetylglutamate kinase; synthase, transferase; 2.80A {Xanthomonas campestris PV}
Probab=99.42 E-value=1e-13 Score=136.41 Aligned_cols=167 Identities=13% Similarity=0.119 Sum_probs=119.6
Q ss_pred hhHHhHhh-ccchHHHHHHHHHHHHHcCCceEEEcccce--eeccCCCCC---C-CCCCchhhHHHHHHHhhcCCCcEEE
Q 020431 33 ESFTDFVV-GHGELWSAQMLAAVVRKNGIDCKWMDTREV--LIVNPTSSN---Q-VDPDFSESEKRLEKWFSQSPSNTII 105 (326)
Q Consensus 33 ~~~~d~i~-~~GE~~s~~~~~~~L~~~Gi~a~~l~~~~~--~~~~~~~~g---~-~~~~~~~~~~~i~~~l~~~~~~ipV 105 (326)
++..+.+. +.| .++.. +++.|.++|++|+++.+..+ ...++..+| + ..++. +.|+.+++ .|.|||
T Consensus 126 ~~~l~vv~~~~g-~vn~~-Lv~aL~~~G~~Av~lsg~~~~a~~~~~~d~g~~G~I~~v~~----~~i~~lL~--~g~IpV 197 (467)
T 3s6k_A 126 PHALAIVRKVFQ-ASNLK-LVEALQQNGARATSITGGVFEAEYLNRDTYGLVGEVKAVNL----APIEASLQ--AGSIPV 197 (467)
T ss_dssp HHHHHHHHHHHH-HHHHH-HHHHHHHHTCCBCCCCSSSBCCCBSCSSSSBSBBCCCCBCC----HHHHTHHH--HTCBCC
T ss_pred HHHHHHHHHHHH-HHHHH-HHHHHHhCCCCceEEcCccEEEEeccCcccCccceEEEEcH----HHHHHHHH--CCCEEE
Confidence 34444443 256 55554 45699999999999998544 111222233 2 34667 88999998 899999
Q ss_pred ecCccccCCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCCeEEeeecHH-HHHHHhhc--CCc
Q 020431 106 ATGFIASTPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEAVILRTLSYQ-EAWEMSYF--GAN 182 (326)
Q Consensus 106 v~Gfi~~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a~~i~~ls~~-e~~~l~~~--g~~ 182 (326)
+++. +.+..|+..++ ++|++|+.+|.+|+|++++|+|||||||+. +++++++++.. |+.++... +.+
T Consensus 198 i~pv-g~~~~G~~~~i---~~D~~Aa~lA~~L~Ad~LiilTdv~Gv~~~------~~~lI~~i~~~~e~~~l~~~~~~tG 267 (467)
T 3s6k_A 198 ITSL-GETPSGQILNV---NADFAANELVQELQPYKIIFLTGTGGLLDA------EGKLIDSINLSTEYDHLMQQPWING 267 (467)
T ss_dssp CCSC-CCCSSSCCCBC---CHHHHHHHHHHHHCCSSCCCCCSSCSCCCS------SCCCCCCCCTTTTTHHHHTSSSCCS
T ss_pred EECc-eECCCCcEEec---CHHHHHHHHHHhcCCCEEEEEecccceeCC------CCCCccccChHHHHHHHHhcCCCCC
Confidence 9953 44667888776 489999999999999999999999999985 46788999885 77777653 357
Q ss_pred ccchh--hHHHHHhCCCCEEEEeccCC----------CCCceEEeCC
Q 020431 183 VLHPR--TIIPVMRYDIPIVIRNIFNL----------SVPGIMICRP 217 (326)
Q Consensus 183 v~~~~--a~~~a~~~~I~v~I~n~~~~----------~~~GT~I~~~ 217 (326)
+|.|+ ++..+.+.+.++.+.++..+ +..||.|.+.
T Consensus 268 GM~~Kl~aa~~a~~gv~~~~iv~g~~~~~Ll~eLft~~g~GT~i~~~ 314 (467)
T 3s6k_A 268 GMRVKIEQIKDLLDRLPLESSVSITRPADLAKELFTHKGSGTLVRRG 314 (467)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCBCCCCTTTHHHHHHSSCTTSCCBCCC
T ss_pred chHHHHHHHHHHHhCCCcEEEEEeCCchHHHHHHhcCCCcceEEeCC
Confidence 88885 66666664334666665433 3569999764
No 47
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=99.35 E-value=1.1e-12 Score=112.23 Aligned_cols=127 Identities=18% Similarity=0.211 Sum_probs=90.0
Q ss_pred cccchhhHHHHHhCCCCEEEEeccCCC-CCc-eEE--e-CCCCCCC--cchh---hccCCeeeEEeecCeEEEEEecCCC
Q 020431 182 NVLHPRTIIPVMRYDIPIVIRNIFNLS-VPG-IMI--C-RPPVDEN--EDEQ---IIDSPVKGFATIDNLALVNVEGTGM 251 (326)
Q Consensus 182 ~v~~~~a~~~a~~~~I~v~I~n~~~~~-~~G-T~I--~-~~~~~~~--~~~~---~~~~~v~~I~~~~~ia~IsivG~~~ 251 (326)
.++-.+.+..+.++||++...++.... ..| +.| . ++.+... ..+. .+.. + .+.+.+++++|+++|.+|
T Consensus 28 ~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~~~a~~~L~~~~~~~~-~-~v~~~~~~a~vsvVG~gm 105 (167)
T 2dt9_A 28 PGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQEALEALEPVLAEIG-G-EAILRPDIAKVSIVGVGL 105 (167)
T ss_dssp TTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGHHHHHHHHHHHHHHHC-C-EEEEECSEEEEEEEESSG
T ss_pred CCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHHHHHHHHHHHHHHHhC-C-cEEEeCCEEEEEEECCCc
Confidence 444556778888899987777655321 123 222 2 2111000 0000 0112 3 788899999999999999
Q ss_pred CCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHHhcCCC
Q 020431 252 AGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREALNAGR 312 (326)
Q Consensus 252 ~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~~~~~~ 312 (326)
++.||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|++.||+.|+....+.+
T Consensus 106 ~~~~Gv~a~~f~aL~~~~InI~~is--~Se~~is~vv~~~d~~~Av~~Lh~~f~~~~~~~~ 164 (167)
T 2dt9_A 106 ASTPEVPAKMFQAVASTGANIEMIA--TSEVRISVIIPAEYAEAALRAVHQAFELDKAHHH 164 (167)
T ss_dssp GGSTHHHHHHHHHHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTC-------
T ss_pred ccCcCHHHHHHHHHHHCCCCEEEEE--ccCCEEEEEEeHHHHHHHHHHHHHHHcCCccccc
Confidence 9999999999999999999999998 7899999999999999999999999987655443
No 48
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=99.35 E-value=1.3e-12 Score=129.32 Aligned_cols=122 Identities=23% Similarity=0.345 Sum_probs=93.3
Q ss_pred cchhhHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchh---h-c--------cC--CeeeEEeecCeEEEEEecC
Q 020431 184 LHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQ---I-I--------DS--PVKGFATIDNLALVNVEGT 249 (326)
Q Consensus 184 ~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~---~-~--------~~--~v~~I~~~~~ia~IsivG~ 249 (326)
+-.+.+..+.++||++...+....+..=+.+.++.+ .....+ . . .. .+..+.+.+|+++|+++|.
T Consensus 334 ~~a~if~~La~~~InV~~IsQ~tse~~Is~~V~~~d-~~~a~~~L~~~l~~~~~~~~~~~~~~~~v~~~~~~a~vsvVG~ 412 (473)
T 3c1m_A 334 TAARIFKALGEEEVNVILISQGSSETNISLVVSEED-VDKALKALKREFGDFGKKSFLNNNLIRDVSVDKDVCVISVVGA 412 (473)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCTTCCEEEEEEGGG-HHHHHHHHHHHHCC----CTTSCCCEEEEEEEEEEEEEEEECT
T ss_pred HHHHHHHHHHHcCCcEEEEEecCCCCEEEEEEechH-HHHHHHHHHHHHhhhcccccccccccceEEEeCCcEEEEEEec
Confidence 334677888899999888874322222122222111 001111 0 1 11 1567889999999999999
Q ss_pred CCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHH
Q 020431 250 GMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (326)
Q Consensus 250 ~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~ 306 (326)
+|++.||+++++|++|+++||||.||+|++|+.+|||+|+++|.++|++.||+.|+.
T Consensus 413 gm~~~~Gvaak~f~aL~~~~InI~misqgtSe~~Is~vV~~~d~~~Av~aLh~~f~~ 469 (473)
T 3c1m_A 413 GMRGAKGIAGKIFTAVSESGANIKMIAQGSSEVNISFVIDEKDLLNCVRKLHEKFIE 469 (473)
T ss_dssp TTTTCTTHHHHHHHHHHHHTCCCCEEEESSCSSEEEEEEEGGGHHHHHHHHHHHHTT
T ss_pred CCCCChhHHHHHHHHHHHCCCCEEEEecCCCCceEEEEEcHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999975
No 49
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=99.32 E-value=2e-12 Score=128.76 Aligned_cols=123 Identities=18% Similarity=0.196 Sum_probs=95.0
Q ss_pred CcccchhhHHHHHhCCCCEEEEeccCCCCCceEEe-CCCC-CC----Ccchh---hccCCeeeEEeecCeEEEEEecCCC
Q 020431 181 ANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMIC-RPPV-DE----NEDEQ---IIDSPVKGFATIDNLALVNVEGTGM 251 (326)
Q Consensus 181 ~~v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~-~~~~-~~----~~~~~---~~~~~v~~I~~~~~ia~IsivG~~~ 251 (326)
..++..+.+..+.++||++.+..+.. ..-.+. +... .. ....+ .+-..+..+.+.+|+|+|++||. |
T Consensus 354 ~~g~~~~if~~la~~~I~vd~I~sse---~sis~~v~~~~~~~~~~~~~~l~~~~~el~~~~~v~~~~~~a~VsiVG~-m 429 (510)
T 2cdq_A 354 QVGFLAKVFSIFEELGISVDVVATSE---VSISLTLDPSKLWSRELIQQELDHVVEELEKIAVVNLLKGRAIISLIGN-V 429 (510)
T ss_dssp CTTHHHHHHHHHHHTTCCEEEEEEET---TEEEEEECCGGGSSSCCCHHHHHHHHHHHTTTSEEEEEEEEEEEEEEEC-G
T ss_pred cccHHHHHHHHHHHcCCcEEEEEeCC---CeEEEEEechHhhhhhHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEEEE-C
Confidence 34555678889999999988776542 222222 2111 00 00111 11123567889999999999999 9
Q ss_pred CCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHH
Q 020431 252 AGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (326)
Q Consensus 252 ~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~ 307 (326)
++.||+++++|++|+++||||.||+|++|+.+|||+|+++|.++|+++||+.|+..
T Consensus 430 ~~~~Gvaa~~f~aL~~~~InI~mIsqGsSei~Is~vV~~~d~~~Av~aLH~~f~~~ 485 (510)
T 2cdq_A 430 QHSSLILERAFHVLYTKGVNVQMISQGASKVNISFIVNEAEAEGCVQALHKSFFES 485 (510)
T ss_dssp GGHHHHHHHHHHHHHHHTCCCSEEEECTTCSEEEEEEEHHHHHHHHHHHHHHHHSS
T ss_pred CCChhHHHHHHHHHHHCCCCEEEEEecCCcceEEEEEeHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999863
No 50
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=99.25 E-value=1.2e-11 Score=105.66 Aligned_cols=123 Identities=21% Similarity=0.139 Sum_probs=90.8
Q ss_pred CcccchhhHHHHHhCCCCEEEEeccCCCCCc-eEE--e-CCCCCC--Ccchhh--ccCCeeeEEeecCeEEEEEecCCCC
Q 020431 181 ANVLHPRTIIPVMRYDIPIVIRNIFNLSVPG-IMI--C-RPPVDE--NEDEQI--IDSPVKGFATIDNLALVNVEGTGMA 252 (326)
Q Consensus 181 ~~v~~~~a~~~a~~~~I~v~I~n~~~~~~~G-T~I--~-~~~~~~--~~~~~~--~~~~v~~I~~~~~ia~IsivG~~~~ 252 (326)
..++-.+.+..+.++||.+...++.... .| +.| . +..+.. ....+. ..-.++.++..+++++|+++|.+|.
T Consensus 36 ~~G~~~~if~~La~~~Invd~i~~s~~~-~g~~~isf~v~~~~~~~a~~~l~~~~~~l~~~~i~~~~~~a~vsvvG~~m~ 114 (167)
T 2re1_A 36 KPGVAYQILGAVADANIEVDMIIQNVGS-EGTTDFSFTVPRGDYKQTLEILSERQDSIGAASIDGDDTVCKVSAVGLGMR 114 (167)
T ss_dssp CTTHHHHHHHHHHTTTCCCCCEEEC-----CEEEEEEEECGGGHHHHHHHHHHSSTTTTCSEEEEESSEEEEEEECSSCT
T ss_pred CcCHHHHHHHHHHHcCCeEEEEEcCCCC-CCeeEEEEEEechHHHHHHHHHHHHHHHcCCceEEecCCEEEEEEECCCcC
Confidence 3455556788888999987776654321 13 222 1 211100 000110 1113567899999999999999999
Q ss_pred CcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHH
Q 020431 253 GVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFRE 306 (326)
Q Consensus 253 ~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~ 306 (326)
+.||+++++|++|+++||||.|++ +|+.+++++|+++|.+++++.||++|+.
T Consensus 115 ~~~Gv~a~i~~aL~~~~InI~~is--tse~~is~vv~~~d~~~av~~Lh~~f~l 166 (167)
T 2re1_A 115 SHVGVAAKIFRTLAEEGINIQMIS--TSEIKVSVLIDEKYMELATRVLHKAFNL 166 (167)
T ss_dssp TCCCHHHHHHHHHHHTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHHCCCcEEEEE--cccCEEEEEEeHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999998 7999999999999999999999999863
No 51
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=99.24 E-value=1.2e-11 Score=104.76 Aligned_cols=87 Identities=15% Similarity=0.164 Sum_probs=75.2
Q ss_pred ccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEcccc-HHHHHHHHHHHHHH
Q 020431 228 IDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKE-VKAVAEALESKFRE 306 (326)
Q Consensus 228 ~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d-~~~av~~Lh~~f~~ 306 (326)
+.+.+++|+.++|+++|++.|.+|.+.||+.+++|+.|+++||+|+||+| |+.+|||++++.+ +.++++.|++
T Consensus 5 ~~~~v~gIa~~~~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~--s~~~Isf~v~~~~~~~~il~~l~~---- 78 (157)
T 3mah_A 5 EKDCIKAVAAKDGITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVAT--SEVGVSLTIDNDKNLPDIVRALSD---- 78 (157)
T ss_dssp --CCCCEEEEEEEEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEEC--CSSEEEEEESCCTTHHHHHHHHTT----
T ss_pred CCCceEEEEecCCEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEe--cCCEEEEEECChHHHHHHHHHHhc----
Confidence 45679999999999999999999999999999999999999999999994 6889999999987 5555555543
Q ss_pred HhcCCCCcceEEEcCeeecC
Q 020431 307 ALNAGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 307 ~~~~~~~~~v~~~~~~~~~~ 326 (326)
+..++++.++|+|+
T Consensus 79 ------~~~v~~~~~~a~vs 92 (157)
T 3mah_A 79 ------IGDVTVDKDMVIIC 92 (157)
T ss_dssp ------TEEEEEEEEEEEEE
T ss_pred ------cCeEEEeCCeEEEE
Confidence 57899999998873
No 52
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=99.22 E-value=6.4e-11 Score=111.76 Aligned_cols=119 Identities=15% Similarity=0.167 Sum_probs=87.7
Q ss_pred HHHHHHhhcCCCcEEEecCc--ccc-----CCCCCcccccCCcchHHHHHHHHhhccceEEEeeccCcccccCCCCCCCC
Q 020431 90 KRLEKWFSQSPSNTIIATGF--IAS-----TPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWTDVDGVYSADPRKVSEA 162 (326)
Q Consensus 90 ~~i~~~l~~~~~~ipVv~Gf--i~~-----~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~tDV~Gv~~~dP~~~~~a 162 (326)
+.|..+++ .+.|||..|- ++. +..|...+ +++|.+|+.+|..++|+.++|+|||||||+.+|+ |++
T Consensus 194 ~~I~~L~~--~g~Ivi~~ggggipv~~~~~~~~G~~~v---id~D~~Aa~lA~~l~Ad~LiiLTdV~gv~~~~~~--~~~ 266 (332)
T 4axs_A 194 DAIKQNVN--NGCVCIVGGGGGIPTIIQDNQYIGVDGV---IDKDFALAKIADAVNADIFVVLTAVDYVYVDFNK--PTQ 266 (332)
T ss_dssp HHHHHHHH--TTCEEECCGGGCEEEEESSSCEEECSSC---CCHHHHHHHHHHHTTCSEEEEECSCSSCEESTTS--TTC
T ss_pred HHHHHhhc--CCeEEEecccCCCCccccCCcccCceee---echHHHHHHHHHHhCCceEEEEecCCceEcCCCC--cch
Confidence 67888887 7888876542 111 11233333 4589999999999999999999999999998886 789
Q ss_pred eEEeeecHHHHHHHhhc---CCcccchh--hHHHHHhCCC--CEEEEeccC-----CCCCceEEe
Q 020431 163 VILRTLSYQEAWEMSYF---GANVLHPR--TIIPVMRYDI--PIVIRNIFN-----LSVPGIMIC 215 (326)
Q Consensus 163 ~~i~~ls~~e~~~l~~~---g~~v~~~~--a~~~a~~~~I--~v~I~n~~~-----~~~~GT~I~ 215 (326)
++++++|.+|+.++... +.+.|-|| |+..+.+.+. .+.|.+..+ ....||.|.
T Consensus 267 ~~i~~it~~e~~~~~~~g~~~~GgM~pKv~Aa~~~v~~g~g~~~iI~~~~~~~~~l~g~~GT~Iv 331 (332)
T 4axs_A 267 KALKTVDVKALNNFINQDQFAKGSMLPKIKAAMGFVNGHPNRSAIIADLSKVEDALKGLSGTKII 331 (332)
T ss_dssp EECSSCBHHHHHHHHHTTCSCTTTTHHHHHHHHHHHTTCTTCEEEEECSTTHHHHTTTSSSEEEB
T ss_pred hhcccCCHHHHHHHHHCCCcCcCCcHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHCCCCCcEEe
Confidence 99999999999999764 45779996 6666666654 566655321 113599885
No 53
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=99.21 E-value=3.8e-11 Score=102.61 Aligned_cols=90 Identities=24% Similarity=0.304 Sum_probs=80.2
Q ss_pred CCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC-----ccEEEEEEccccHHHHHHHHHHHH
Q 020431 230 SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS-----EHSVCFAVPEKEVKAVAEALESKF 304 (326)
Q Consensus 230 ~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s-----e~sIs~~V~~~d~~~av~~Lh~~f 304 (326)
..+++|+..+|+++|++.| +.+.||+++++|+.|+++||+|+||+|+.+ +.+++|+|++++.+++.+.|++ +
T Consensus 5 ~~v~gIa~~~~~a~Itv~g--~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~~~a~~~L~~-~ 81 (167)
T 2dt9_A 5 KAVTGVALDLDHAQIGLIG--IPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQEALEALEP-V 81 (167)
T ss_dssp CCEEEEEEECSEEEEEEEE--EECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGHHHHHHHHHH-H
T ss_pred CceeEEEEeCCEEEEEEec--CCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHHHHHHHHHHH-H
Confidence 4699999999999999998 688899999999999999999999999876 7899999999999999999987 5
Q ss_pred HHHhcCCCCcceEEEcCeeecC
Q 020431 305 REALNAGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 305 ~~~~~~~~~~~v~~~~~~~~~~ 326 (326)
..+++ + ++.++.++++++
T Consensus 82 ~~~~~---~-~v~~~~~~a~vs 99 (167)
T 2dt9_A 82 LAEIG---G-EAILRPDIAKVS 99 (167)
T ss_dssp HHHHC---C-EEEEECSEEEEE
T ss_pred HHHhC---C-cEEEeCCEEEEE
Confidence 55664 4 899999998863
No 54
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=99.21 E-value=4.1e-11 Score=103.88 Aligned_cols=93 Identities=27% Similarity=0.373 Sum_probs=81.1
Q ss_pred ccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCc-----cEEEEEEccccHHHHHHHHHH
Q 020431 228 IDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE-----HSVCFAVPEKEVKAVAEALES 302 (326)
Q Consensus 228 ~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se-----~sIs~~V~~~d~~~av~~Lh~ 302 (326)
+.+.+++|+.++|+++|+|.| |.+.||+++++|+.|+++||+|+||+|+.|+ .+++|++++++.+++.+.|++
T Consensus 3 e~~~V~gIa~~~~~~~Iti~~--~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~~~a~~~L~~ 80 (181)
T 3s1t_A 3 EDPILTGVAHDRSEAKVTIVG--LPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDS 80 (181)
T ss_dssp -CCEEEEEEEECSEEEEEEEE--EESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTHHHHHHHHHH
T ss_pred CCCcEEEEEecCCEEEEEEec--CCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHHHHHHHHHHH
Confidence 346799999999999999996 8999999999999999999999999997765 589999999999999888877
Q ss_pred HHHHHhcCCCCcceEEEcCeeecC
Q 020431 303 KFREALNAGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 303 ~f~~~~~~~~~~~v~~~~~~~~~~ 326 (326)
+..++ .+++++++.++|+|+
T Consensus 81 -~~~el---~~~~v~~~~~va~Vs 100 (181)
T 3s1t_A 81 -LRNEI---GFSQLLYDDHIGKVS 100 (181)
T ss_dssp -THHHH---CCSEEEEESCEEEEE
T ss_pred -HHHhc---CcceEEEeCCEEEEE
Confidence 44455 467899999999873
No 55
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=99.20 E-value=1.1e-11 Score=121.72 Aligned_cols=116 Identities=21% Similarity=0.312 Sum_probs=86.3
Q ss_pred chhhHHHHHhCCCCEEEEeccCCCCCceEEe-CCCC---C-CCcchh---hccCCeeeEEeecCeEEEEEecCCCCCccc
Q 020431 185 HPRTIIPVMRYDIPIVIRNIFNLSVPGIMIC-RPPV---D-ENEDEQ---IIDSPVKGFATIDNLALVNVEGTGMAGVPG 256 (326)
Q Consensus 185 ~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~-~~~~---~-~~~~~~---~~~~~v~~I~~~~~ia~IsivG~~~~~~~~ 256 (326)
..+.+..+.++||++.+..+. + ..-.+. +... . .....+ .+-..+..+.+.+|+++|++||.+|++.||
T Consensus 325 ~~~if~~l~~~~i~vd~i~ss--~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~~~~v~~~~~~a~vsvVG~gm~~~~g 401 (449)
T 2j0w_A 325 LAEVFGILARHNISVDLITTS--E-VSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALIGNDLSKACG 401 (449)
T ss_dssp HHHHTTTTTTTTCCCSEEEEE--T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHHHSCEEEEEEEEEEEEEESSCTTSSS
T ss_pred HHHHHHHHHHcCCCEEEEEeC--C-CeEEEEEeccccchhhHHHHHHHHHHHhccCCeEEEeCCeEEEEEECCCcccccc
Confidence 345666777899987666543 1 222222 2211 0 000000 011114568889999999999999999999
Q ss_pred HHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHH
Q 020431 257 TANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFR 305 (326)
Q Consensus 257 i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~ 305 (326)
+.+++|++|++ |||.||+|++|+.+|||+|+++|.++|++.||++|+
T Consensus 402 v~~~~f~aL~~--ini~mIsqg~Se~~Is~vV~~~d~~~Av~~lh~~f~ 448 (449)
T 2j0w_A 402 VGKEVFGVLEP--FNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLF 448 (449)
T ss_dssp HHHHHHSSCTT--SCCCEEEESSCTTEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhC--CCeEEEEecCCCcEEEEEEeHHHHHHHHHHHHHHHh
Confidence 99999999966 999999999999999999999999999999999997
No 56
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=99.19 E-value=2.1e-11 Score=123.80 Aligned_cols=74 Identities=30% Similarity=0.416 Sum_probs=70.4
Q ss_pred eeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHHh
Q 020431 233 KGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREAL 308 (326)
Q Consensus 233 ~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~~ 308 (326)
..+.+++++|+|++||.||+++||+++|+|++|+++|||+.||+ +||.+|||+|+++|.++|+++||+.|+...
T Consensus 519 ~~v~~~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tSEi~Is~vV~~~~~~~Av~alh~~F~l~~ 592 (600)
T 3l76_A 519 AAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA--TSEIKISCVVPQDRGVDALKAAHSAFNLAG 592 (600)
T ss_dssp CEEEEECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--ECSSEEEEEEEGGGHHHHHHHHHHHTTTTS
T ss_pred ceEEEeCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE--cCCceEEEEEeHHHHHHHHHHHHHHhCCCC
Confidence 46889999999999999999999999999999999999999999 899999999999999999999999997643
No 57
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=99.14 E-value=5.7e-11 Score=115.87 Aligned_cols=123 Identities=22% Similarity=0.253 Sum_probs=91.3
Q ss_pred ccchhhHHHHHhCCCCEEEEeccCCC-CCc-eEEe---CCCCCC--Ccchhhc--cCCeeeEEeecCeEEEEEecCCCCC
Q 020431 183 VLHPRTIIPVMRYDIPIVIRNIFNLS-VPG-IMIC---RPPVDE--NEDEQII--DSPVKGFATIDNLALVNVEGTGMAG 253 (326)
Q Consensus 183 v~~~~a~~~a~~~~I~v~I~n~~~~~-~~G-T~I~---~~~~~~--~~~~~~~--~~~v~~I~~~~~ia~IsivG~~~~~ 253 (326)
++-.+.+..+.++||.+........+ ..| +.|+ +..+.. ....+.. .-.+..+.+.+|+++|+++|.+|++
T Consensus 277 g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~~~~a~~~l~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~ 356 (421)
T 3ab4_A 277 GEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSDGRRAMEILKKLQVQGNWTNVLYDDQVGKVSLVGAGMKS 356 (421)
T ss_dssp THHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTTHHHHHHHHHHHHTTTTCSEEEEECCEEEEEEECGGGTS
T ss_pred cHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechhHHHHHHHHHHHHHHcCCceEEEeCCeEEEEEEccCccc
Confidence 33446788889999998877542211 023 2332 221100 0001111 1124578889999999999999999
Q ss_pred cccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHH
Q 020431 254 VPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREA 307 (326)
Q Consensus 254 ~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~ 307 (326)
+||+++++|++|+++||||.||+ +|+.+|||+|+++|.++|++.||+.|+..
T Consensus 357 ~~Gv~a~~f~aL~~~~InI~~is--~Se~~is~vV~~~d~~~Av~~Lh~~f~~~ 408 (421)
T 3ab4_A 357 HPGVTAEFMEALRDVNVNIELIS--TSEIRISVLIREDDLDAAARALHEQFQLG 408 (421)
T ss_dssp CTTHHHHHHHHHHHTTCCCCEEE--EETTEEEEEEEGGGHHHHHHHHHHHTTCC
T ss_pred CccHHHHHHHHHHHCCCCEEEEE--cCCCeEEEEEeHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999998 78999999999999999999999999864
No 58
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=99.14 E-value=1.2e-10 Score=102.27 Aligned_cols=92 Identities=27% Similarity=0.376 Sum_probs=79.8
Q ss_pred ccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCc-----cEEEEEEccccHHHHHHHHHH
Q 020431 228 IDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE-----HSVCFAVPEKEVKAVAEALES 302 (326)
Q Consensus 228 ~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se-----~sIs~~V~~~d~~~av~~Lh~ 302 (326)
+++.+++|+..+|+++|+|.| |.+.||+++++|+.|+++||||+||+|+.|+ ..++|++++++..++...|.+
T Consensus 22 E~~vVtGIa~~~~~a~Iti~g--~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~~~~~~~l~~ 99 (200)
T 4go7_X 22 EDPILTGVAHDRSEAKVTIVG--LPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVGPAAVEKLDS 99 (200)
T ss_dssp CSCEEEEEEEECSEEEEEEEE--EECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGHHHHHHHHHT
T ss_pred ccCcEEEEEccCCEEEEEEec--CCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhHHHHHHHHHH
Confidence 456799999999999999987 8999999999999999999999999998764 468999999999999988866
Q ss_pred HHHHHhcCCCCcceEEEcCeeec
Q 020431 303 KFREALNAGRLSQVCLSFWLCDY 325 (326)
Q Consensus 303 ~f~~~~~~~~~~~v~~~~~~~~~ 325 (326)
+..++. ..++.++.++|.|
T Consensus 100 -~~~~~~---~~~v~~~~~iakV 118 (200)
T 4go7_X 100 -LRNEIG---FSQLLYDDHIGKV 118 (200)
T ss_dssp -THHHHC---CSEEEEECCEEEE
T ss_pred -HHhhhc---eeeEEEecCeeee
Confidence 444443 5679999999876
No 59
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=99.08 E-value=3.2e-10 Score=96.81 Aligned_cols=92 Identities=29% Similarity=0.401 Sum_probs=77.0
Q ss_pred cCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC---ccEEEEEEccccHHHHHHHHHHHHH
Q 020431 229 DSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS---EHSVCFAVPEKEVKAVAEALESKFR 305 (326)
Q Consensus 229 ~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s---e~sIs~~V~~~d~~~av~~Lh~~f~ 305 (326)
...+++|+.++|+++|++.| |.+.||+++++|+.|+++||+|+||+|+.+ +.+++|+|++.+.+++.+.|++ +.
T Consensus 13 ~~~V~gIa~~~~~~~i~v~~--~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~~~~a~~~l~~-~~ 89 (167)
T 2re1_A 13 RAAVTGIAFDKNQARINVRG--VPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGDYKQTLEILSE-RQ 89 (167)
T ss_dssp --CCCEEEEECCCEEEEEEE--EECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGGHHHHHHHHHH-SS
T ss_pred CCCeEEEEecCCEEEEEEec--CCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechHHHHHHHHHHH-HH
Confidence 45699999999999999998 889999999999999999999999999766 7899999999999999888876 32
Q ss_pred HHhcCCCCcceEEEcCeeecC
Q 020431 306 EALNAGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 306 ~~~~~~~~~~v~~~~~~~~~~ 326 (326)
.++ .+..+.++.++++++
T Consensus 90 ~~l---~~~~i~~~~~~a~vs 107 (167)
T 2re1_A 90 DSI---GAASIDGDDTVCKVS 107 (167)
T ss_dssp TTT---TCSEEEEESSEEEEE
T ss_pred HHc---CCceEEecCCEEEEE
Confidence 333 246789999988763
No 60
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=98.93 E-value=1.8e-09 Score=93.20 Aligned_cols=91 Identities=25% Similarity=0.333 Sum_probs=77.7
Q ss_pred CCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC-----ccEEEEEEccccHHHHHHHHHHHH
Q 020431 230 SPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS-----EHSVCFAVPEKEVKAVAEALESKF 304 (326)
Q Consensus 230 ~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s-----e~sIs~~V~~~d~~~av~~Lh~~f 304 (326)
..+++|+.++|+++|+|.+ +.+.||+++++|+.|+++||+|+||+|+++ +.+|+|+++.++.+++.+.|.+ +
T Consensus 4 ~~V~gIa~~~~~~~Itv~~--~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~d~~~a~~~l~~-~ 80 (178)
T 2dtj_A 4 AVLTGVATDKSEAKVTVLG--ISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRSDGRRAMEILKK-L 80 (178)
T ss_dssp CEEEEEEEECSEEEEEEEE--EECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHHHHHHHHHHHHT-T
T ss_pred CcEEEEEecCCEEEEEEec--CCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccccHHHHHHHHHH-H
Confidence 4699999999999999986 578899999999999999999999999855 7889999999999988888876 3
Q ss_pred HHHhcCCCCcceEEEcCeeecC
Q 020431 305 REALNAGRLSQVCLSFWLCDYT 326 (326)
Q Consensus 305 ~~~~~~~~~~~v~~~~~~~~~~ 326 (326)
..++. +.+++++.++|+|+
T Consensus 81 ~~~~~---~~~v~~~~~~a~Vs 99 (178)
T 2dtj_A 81 QVQGN---WTNVLYDDQVGKVS 99 (178)
T ss_dssp TTTTT---CSEEEEESCEEEEE
T ss_pred HHhcC---CCeEEEeCCeEEEE
Confidence 33332 46799999998873
No 61
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=97.99 E-value=1.3e-05 Score=65.93 Aligned_cols=109 Identities=16% Similarity=0.170 Sum_probs=72.0
Q ss_pred hhhHHHHHhCCCCEEEEeccCCCCCc-eEEeCCCCCCCcchhhccCCeeeEEeecCeEEEEEecCCCCCcccHHHHHHHH
Q 020431 186 PRTIIPVMRYDIPIVIRNIFNLSVPG-IMICRPPVDENEDEQIIDSPVKGFATIDNLALVNVEGTGMAGVPGTANAIFGA 264 (326)
Q Consensus 186 ~~a~~~a~~~~I~v~I~n~~~~~~~G-T~I~~~~~~~~~~~~~~~~~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~ 264 (326)
.+.+..+.+.|+.+...........| ..+... + .....+. ++... -.....+++|-+|.++||+++++|++
T Consensus 21 ~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~-d-~~~a~~~----L~~~G--~~v~~~svv~v~~~d~pGvla~i~~~ 92 (144)
T 2f06_A 21 TEVTEVLAKENINLSALCIAENADFGILRGIVS-D-PDKAYKA----LKDNH--FAVNITDVVGISCPNVPGALAKVLGF 92 (144)
T ss_dssp HHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES-C-HHHHHHH----HHHTT--CCEEEEEEEEEEEESSTTHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC-C-HHHHHHH----HHHcC--CeEeeeeEEEEEeCCCCcHHHHHHHH
Confidence 34567777889887665444322235 334421 1 0000110 11000 11233478888899999999999999
Q ss_pred HHhCCCcE-EEEEecCCccEEEEEEccccHHHHHHHHHHH
Q 020431 265 VKDVGANV-IMISQASSEHSVCFAVPEKEVKAVAEALESK 303 (326)
Q Consensus 265 L~~~~I~v-~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~ 303 (326)
|+++|||| .+++.. ++..++++++.+|.+++++.||+.
T Consensus 93 L~~~~InI~~~~~~~-~~~~~~~~i~~~d~~~A~~~L~~~ 131 (144)
T 2f06_A 93 LSAEGVFIEYMYSFA-NNNVANVVIRPSNMDKCIEVLKEK 131 (144)
T ss_dssp HHHTTCCEEEEEEEE-ETTEEEEEEEESCHHHHHHHHHHT
T ss_pred HHHCCCCEEEEEEEc-cCCcEEEEEEeCCHHHHHHHHHHc
Confidence 99999999 556632 678899999999999999999984
No 62
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=97.80 E-value=1.2e-05 Score=78.65 Aligned_cols=91 Identities=11% Similarity=0.200 Sum_probs=76.8
Q ss_pred CeeeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHHHHHHhcC
Q 020431 231 PVKGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESKFREALNA 310 (326)
Q Consensus 231 ~v~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~f~~~~~~ 310 (326)
.+++|+..+|+++|++.|.+|.+.+|+.+++|+.|++++|+|+||+| ++.++||+|++++..+.++.+.+++..++.
T Consensus 288 ~v~gIa~~~~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~~--~~~~is~~V~~~d~~~~~~~~~~el~~~~~- 364 (446)
T 3tvi_A 288 TITGIAGKKNFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMPS--GVDSVSLVIEDCKLDGKCDKIIEEIKKQCN- 364 (446)
T ss_dssp CCCEEEEEEEEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBCE--ETTEEEEEEEHHHHTTTHHHHHHHHHHHSC-
T ss_pred ceEEEEecCCEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEec--CCCEEEEEEecchHHHHHHHHHHHHHHhcC-
Confidence 68999999999999999999999999999999999999999999985 588999999999876544444444544443
Q ss_pred CCCcceEEEcCeeecC
Q 020431 311 GRLSQVCLSFWLCDYT 326 (326)
Q Consensus 311 ~~~~~v~~~~~~~~~~ 326 (326)
..+++++.++|+|+
T Consensus 365 --~~~v~v~~~vA~VS 378 (446)
T 3tvi_A 365 --PDSIEIHPNMALVA 378 (446)
T ss_dssp --CSEEEEEEEEEEEE
T ss_pred --CCcEEEeCCeEEEE
Confidence 45799999999874
No 63
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=96.54 E-value=0.0077 Score=49.09 Aligned_cols=50 Identities=10% Similarity=0.108 Sum_probs=39.9
Q ss_pred CCCcccHHHHHHHHHHhCCCcEEEEEecCCcc-E-EEEEEccccHHHHHHHHHH
Q 020431 251 MAGVPGTANAIFGAVKDVGANVIMISQASSEH-S-VCFAVPEKEVKAVAEALES 302 (326)
Q Consensus 251 ~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~-s-Is~~V~~~d~~~av~~Lh~ 302 (326)
+.+.||.++++|+.|+++||||++|+|+.+.. . ++|. ..+.+++.+.|++
T Consensus 13 v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~--~~d~~~a~~~L~~ 64 (144)
T 2f06_A 13 LENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGI--VSDPDKAYKALKD 64 (144)
T ss_dssp ECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEE--ESCHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEE--eCCHHHHHHHHHH
Confidence 56789999999999999999999999874432 4 4465 4677888888875
No 64
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=95.79 E-value=0.034 Score=45.22 Aligned_cols=66 Identities=11% Similarity=0.185 Sum_probs=56.7
Q ss_pred EEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHHH
Q 020431 235 FATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALESK 303 (326)
Q Consensus 235 I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~~ 303 (326)
+....+...|+|.|..-.+..|+++.+.+.|+++||++..|| +=.+.. ++|++++.++++++|.+.
T Consensus 56 ~~~~~~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~iS--ty~tD~-IlVp~~~~~~Ai~aL~~~ 121 (134)
T 1zhv_A 56 VRVDPGWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFVVS--TFDGDH-LLVRSNDLEKTADLLANA 121 (134)
T ss_dssp SEEEEEEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEEEE--CSSCEE-EEEEGGGHHHHHHHHHHT
T ss_pred CccCCCeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEEEE--eccccE-EEEeHHHHHHHHHHHHHc
Confidence 466778899999988777889999999999999999999998 434444 678999999999999885
No 65
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=95.27 E-value=0.051 Score=44.10 Aligned_cols=64 Identities=14% Similarity=0.169 Sum_probs=52.8
Q ss_pred EeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccHHHHHHHHHH
Q 020431 236 ATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEVKAVAEALES 302 (326)
Q Consensus 236 ~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~~~av~~Lh~ 302 (326)
....+...|++.|..-.+..|+.+.+-+.|+++||.+..|| +=.+.- ++|++++.+++++.|.+
T Consensus 66 ~~~~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~iS--ty~tDh-IlVp~~~~~~A~~~L~~ 129 (133)
T 1zvp_A 66 ESSALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANVIA--GYYHDH-IFVQKEKAQQALQALGE 129 (133)
T ss_dssp CCCSCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEEEE--CSSCEE-EEEEGGGHHHHHHHHTT
T ss_pred ccCCCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEEEE--eccccE-EEEehhHHHHHHHHHHH
Confidence 45568889999987777899999999999999999999998 434444 67899999999999865
No 66
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=92.68 E-value=0.59 Score=34.24 Aligned_cols=59 Identities=20% Similarity=0.316 Sum_probs=43.2
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC--ccEEEEE--Ecc-ccHHHHHHHHHH
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS--EHSVCFA--VPE-KEVKAVAEALES 302 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s--e~sIs~~--V~~-~d~~~av~~Lh~ 302 (326)
...|++.|. +.||+++++.+.|+++|+||.-++|... ...+.+. ++. .+++.+.+.|.+
T Consensus 5 ~~~l~v~~~---DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~ 68 (91)
T 1zpv_A 5 KAIITVVGK---DKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEES---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHH
T ss_pred eEEEEEEEC---CCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCCCHHHHHHHHHH
Confidence 356888875 6899999999999999999999987653 2233333 444 467777777765
No 67
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=90.66 E-value=0.21 Score=41.89 Aligned_cols=52 Identities=12% Similarity=0.274 Sum_probs=37.7
Q ss_pred CCCcccHHHHHHHHHHhCCCcEEEEEecCCc----cEEEEEEccc--cHHHHHHHHHH
Q 020431 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE----HSVCFAVPEK--EVKAVAEALES 302 (326)
Q Consensus 251 ~~~~~~i~a~if~~L~~~~I~v~~Isq~~se----~sIs~~V~~~--d~~~av~~Lh~ 302 (326)
..+.||+++++...|+++|+||..++-+.++ ..+.+.++.. .++++.+.|++
T Consensus 10 v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~d~~~leqI~kqL~K 67 (164)
T 2f1f_A 10 LENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVGDEKVLEQIEKQLHK 67 (164)
T ss_dssp EECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEeccHHHHHHHHHHHcC
Confidence 3478999999999999999999887765443 4466677733 45555555555
No 68
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=90.51 E-value=0.19 Score=42.21 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=37.4
Q ss_pred CCCcccHHHHHHHHHHhCCCcEEEEEecCCc----cEEEEEEccc--cHHHHHHHHHH
Q 020431 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE----HSVCFAVPEK--EVKAVAEALES 302 (326)
Q Consensus 251 ~~~~~~i~a~if~~L~~~~I~v~~Isq~~se----~sIs~~V~~~--d~~~av~~Lh~ 302 (326)
..+.||+++++...|+++|+||..++-+.++ ..+.+.++.. .++++.+.|++
T Consensus 11 veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d~~~leql~kQL~K 68 (165)
T 2pc6_A 11 MENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGPDEIVEQITKQLNK 68 (165)
T ss_dssp EECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred EeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEeccHHHHHHHHHHhcC
Confidence 3478999999999999999999887765443 4466677633 44555555554
No 69
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=88.59 E-value=1.2 Score=37.54 Aligned_cols=60 Identities=20% Similarity=0.301 Sum_probs=42.9
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC--ccEEEEEEccccHHHHHHHHHHHHH
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS--EHSVCFAVPEKEVKAVAEALESKFR 305 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s--e~sIs~~V~~~d~~~av~~Lh~~f~ 305 (326)
...|++.|. ++||+++++.+.|+++|+||.-++|... ...+.+.+.... .....|.+.|.
T Consensus 6 ~~~itv~~~---DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~--~~~~~l~~~L~ 67 (192)
T 1u8s_A 6 HLVITAVGT---DRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP--SNITRVETTLP 67 (192)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH--HHHHHHHHHHH
T ss_pred EEEEEEEcC---CCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC--CCHHHHHHHHH
Confidence 467899985 5899999999999999999999988653 344455554332 24455555544
No 70
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=87.93 E-value=2.1 Score=30.73 Aligned_cols=57 Identities=18% Similarity=0.304 Sum_probs=37.7
Q ss_pred EEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCc--cEEEEEEccc---cHHHHHHHHH
Q 020431 242 ALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE--HSVCFAVPEK---EVKAVAEALE 301 (326)
Q Consensus 242 a~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se--~sIs~~V~~~---d~~~av~~Lh 301 (326)
..|.+.+ .+.||+++++.+.|++.|+||..+.+.... ..+.+.++-. ++.++++.|.
T Consensus 6 ~~l~v~~---~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 6 AGIRIVG---EDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVKNTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEE---ECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHT
T ss_pred EEEEEEE---ECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEECCHHHHHHHHHHHh
Confidence 3455654 478999999999999999999998876432 2344444433 3444444443
No 71
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=86.07 E-value=1.1 Score=38.54 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=37.2
Q ss_pred CCCcccHHHHHHHHHHhCCCcEEEEEecCCc----cEEEEEEccc--cHHHHHHHHHH
Q 020431 251 MAGVPGTANAIFGAVKDVGANVIMISQASSE----HSVCFAVPEK--EVKAVAEALES 302 (326)
Q Consensus 251 ~~~~~~i~a~if~~L~~~~I~v~~Isq~~se----~sIs~~V~~~--d~~~av~~Lh~ 302 (326)
+.+.||+++|+...|++.|+||..++-+.++ ..+.++|+.. .++++.+.|++
T Consensus 36 VeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~e~~ieqL~kQL~K 93 (193)
T 2fgc_A 36 VHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGDDKTIEQIEKQAYK 93 (193)
T ss_dssp EECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEECTTHHHHHHHHHTT
T ss_pred ECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECCHHHHHHHHHHhcC
Confidence 4578999999999999999999988765332 3466677643 35555555544
No 72
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=85.11 E-value=2.6 Score=35.82 Aligned_cols=38 Identities=21% Similarity=0.315 Sum_probs=33.4
Q ss_pred CeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC
Q 020431 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS 280 (326)
Q Consensus 240 ~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s 280 (326)
...+|+|.|. ++||+++++.+.|+++|+||.-+.|.+.
T Consensus 92 ~~~iltv~g~---DrpGiva~Vt~~La~~g~nI~~~~~~t~ 129 (195)
T 2nyi_A 92 REYELYVEGP---DSEGIVEAVTAVLAKKGANIVELETETL 129 (195)
T ss_dssp EEEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred cEEEEEEEeC---CCcCHHHHHHHHHHHcCCCEEEceeeec
Confidence 4578999985 5899999999999999999999998743
No 73
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=79.41 E-value=2.5 Score=36.99 Aligned_cols=51 Identities=10% Similarity=0.221 Sum_probs=38.2
Q ss_pred CCcccHHHHHHHHHHhCCCcEEEEEecCCc-------cEEEEEEccccHHHHHHHHHH
Q 020431 252 AGVPGTANAIFGAVKDVGANVIMISQASSE-------HSVCFAVPEKEVKAVAEALES 302 (326)
Q Consensus 252 ~~~~~i~a~if~~L~~~~I~v~~Isq~~se-------~sIs~~V~~~d~~~av~~Lh~ 302 (326)
.++||+++++.+.|+++++||..++|.... ..+.+-+++.+++++++.|.+
T Consensus 12 ~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d~~Le~LL~kLrk 69 (223)
T 1y7p_A 12 ENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEGGDFEKILERVKT 69 (223)
T ss_dssp ECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECSSCHHHHHHHHHT
T ss_pred cCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECCCCHHHHHHHHhC
Confidence 478999999999999999999999997754 355566666688888888876
No 74
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=77.01 E-value=11 Score=31.51 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=32.3
Q ss_pred CeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC
Q 020431 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS 280 (326)
Q Consensus 240 ~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s 280 (326)
...+|++.|. ++||+++++.+.|+++|+||..+.|.+.
T Consensus 92 ~~~~l~v~~~---D~~Gil~~v~~~l~~~~~nI~~~~~~t~ 129 (192)
T 1u8s_A 92 YTVEVYVESD---DKLGLTEKFTQFFAQRQIGMASLSAQTI 129 (192)
T ss_dssp EEEEEEEEES---CCTTHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred ceEEEEEEeC---CCccHHHHHHHHHHHcCCcHHHhhhhcc
Confidence 3567888874 5899999999999999999999887643
No 75
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=76.62 E-value=4.6 Score=38.03 Aligned_cols=38 Identities=21% Similarity=0.454 Sum_probs=33.5
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCc
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSE 281 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se 281 (326)
..+|+++|. ++||+.+++.+.|+++|+||.-++|....
T Consensus 12 ~~~lt~~g~---Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~ 49 (415)
T 3p96_A 12 SVLITVTGV---DQPGVTATLFEVLSRHGVELLNVEQVVIR 49 (415)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHTTTTCEEEEEEEEEET
T ss_pred eEEEEEEcC---CCCCHHHHHHHHHHHCCCCEEEeeeEEEC
Confidence 468999985 68999999999999999999999987643
No 76
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=75.13 E-value=5.1 Score=36.69 Aligned_cols=36 Identities=8% Similarity=-0.027 Sum_probs=32.1
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecC
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQAS 279 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~ 279 (326)
-.+++++|. ++||+.+++.+.|+++|+||.-++|..
T Consensus 22 ~~iLtv~c~---DrpGIVa~VS~~La~~g~NI~d~~q~~ 57 (302)
T 3o1l_A 22 TFRLVIACP---DRVGIVAKVSNFLASHNGWITEASHHS 57 (302)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred eEEEEEECC---CCCCHHHHHHHHHHHCCCCEEEeeEEe
Confidence 367899985 689999999999999999999999873
No 77
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=74.29 E-value=5.2 Score=33.85 Aligned_cols=61 Identities=26% Similarity=0.230 Sum_probs=42.7
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCCccE--EEEEEcccc--HHHHHHHHHHHH
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASSEHS--VCFAVPEKE--VKAVAEALESKF 304 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~se~s--Is~~V~~~d--~~~av~~Lh~~f 304 (326)
...|+|.|. ++||+.+++...|+++|.||.-+.|...... +.+.+.... .......|.+.|
T Consensus 5 ~~~ltv~~~---DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~~~~~~~~~l~~~L 69 (195)
T 2nyi_A 5 SFVVSVAGS---DRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAKDGKLIQSALESAL 69 (195)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSSSSHHHHHHHHHHS
T ss_pred EEEEEEEeC---CCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCccchhHHHHHHHHH
Confidence 467889985 6899999999999999999999888765433 345554322 112345565554
No 78
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=71.54 E-value=7.5 Score=35.24 Aligned_cols=35 Identities=9% Similarity=0.042 Sum_probs=31.7
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEec
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~ 278 (326)
-..++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 8 ~~vLtv~c~---DrpGIVa~Vs~~La~~g~NI~d~~q~ 42 (286)
T 3n0v_A 8 TWILTADCP---SMLGTVDVVTRYLFEQRCYVTEHHSF 42 (286)
T ss_dssp CEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cEEEEEEeC---CCCCHHHHHHHHHHHCCCCeeeeeee
Confidence 367899985 68999999999999999999999987
No 79
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=70.74 E-value=17 Score=30.36 Aligned_cols=69 Identities=13% Similarity=0.149 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCc
Q 020431 46 WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDG 125 (326)
Q Consensus 46 ~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrgg 125 (326)
-++..+++.|++.|+...... ++.| |.+...+.++++++ ...+.|++|=.+.+ -
T Consensus 23 tN~~~l~~~L~~~G~~v~~~~-----iv~D--------d~~~I~~~l~~a~~--~~DlVittGG~g~~-----------~ 76 (172)
T 3kbq_A 23 TNAAFIGNFLTYHGYQVRRGF-----VVMD--------DLDEIGWAFRVALE--VSDLVVSSGGLGPT-----------F 76 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE-----EECS--------CHHHHHHHHHHHHH--HCSEEEEESCCSSS-----------T
T ss_pred HHHHHHHHHHHHCCCEEEEEE-----EeCC--------CHHHHHHHHHHHHh--cCCEEEEcCCCcCC-----------c
Confidence 366789999999999765542 3333 34455677777776 35677777733432 2
Q ss_pred chHHHHHHHHhhccc
Q 020431 126 SDFSAAIMGALLRAH 140 (326)
Q Consensus 126 sD~~A~~lA~~l~a~ 140 (326)
-|.+.-.+|.+++.+
T Consensus 77 ~D~T~ea~a~~~~~~ 91 (172)
T 3kbq_A 77 DDMTVEGFAKCIGQD 91 (172)
T ss_dssp TCCHHHHHHHHHTCC
T ss_pred ccchHHHHHHHcCCC
Confidence 399999999999954
No 80
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=69.64 E-value=8.1 Score=35.12 Aligned_cols=36 Identities=11% Similarity=0.149 Sum_probs=32.3
Q ss_pred CeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEec
Q 020431 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (326)
Q Consensus 240 ~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~ 278 (326)
+-..++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 9 ~~~vLtv~c~---Dr~GIVa~Vs~~La~~g~NI~d~~q~ 44 (292)
T 3lou_A 9 HQFVLTLSCP---SAAGQVAAVVGLLDRHRCYVDELTVF 44 (292)
T ss_dssp CEEEEEEEEE---SCSCHHHHHHHHHHHTTEEEEEEEEE
T ss_pred CcEEEEEEcC---CCCCHHHHHHHHHHHCCCCEEeeEEE
Confidence 3467999985 68999999999999999999999987
No 81
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=68.97 E-value=6 Score=35.94 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=31.5
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEec
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~ 278 (326)
-..++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 6 ~~iLtv~g~---DrpGIVa~Vs~~La~~g~NI~d~~q~ 40 (288)
T 3obi_A 6 QYVLTLSCP---DRAGIVSAVSTFLFENGQNILDAQQY 40 (288)
T ss_dssp EEEEEEEEE---CCTTHHHHHHHHHHHTTEEEEEEEEE
T ss_pred eEEEEEECC---CCCCHHHHHHHHHHHCCCcEEeeeee
Confidence 367899985 68999999999999999999999994
No 82
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=67.46 E-value=16 Score=33.11 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=32.3
Q ss_pred CeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEec
Q 020431 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQA 278 (326)
Q Consensus 240 ~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~ 278 (326)
+-.+++++|. ++||+.+++.+.|+++|+||.-++|.
T Consensus 6 ~~~vLtv~c~---Dr~GIVa~Vs~~La~~g~NI~d~~q~ 41 (287)
T 3nrb_A 6 NQYVLSLACQ---DAPGIVSEVSTFLFNNGANIVEAEQF 41 (287)
T ss_dssp TEEEEEEEEE---CCTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CeEEEEEECC---CCCCHHHHHHHHHHHCCCCEEeeeee
Confidence 4578999985 68999999999999999999999994
No 83
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=58.56 E-value=31 Score=27.56 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=33.1
Q ss_pred CCcccHHHHHHHHHHhCCCcEEEEEecCCccEEEEEEccccH
Q 020431 252 AGVPGTANAIFGAVKDVGANVIMISQASSEHSVCFAVPEKEV 293 (326)
Q Consensus 252 ~~~~~i~a~if~~L~~~~I~v~~Isq~~se~sIs~~V~~~d~ 293 (326)
.+++|+++++.+.|+++++|+..+...+. ..+.+-++..+.
T Consensus 8 ~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~i~~~~~~~~~ 48 (190)
T 2jhe_A 8 EDRLGLTRELLDLLVLRGIDLRGIEIDPI-GRIYLNFAELEF 48 (190)
T ss_dssp CSCTTHHHHHHHHHHHTTCCEEEEEEETT-TEEEEEECCCCH
T ss_pred ecCCcHHHHHHHHHHHcCCCeEEEEEecC-CEEEEEEEeCCH
Confidence 46899999999999999999999987655 347777775543
No 84
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=52.69 E-value=25 Score=33.30 Aligned_cols=60 Identities=10% Similarity=0.103 Sum_probs=36.5
Q ss_pred CeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecC-CccEEEEE-Eccc--cHHHHHHHHHH
Q 020431 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQAS-SEHSVCFA-VPEK--EVKAVAEALES 302 (326)
Q Consensus 240 ~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~-se~sIs~~-V~~~--d~~~av~~Lh~ 302 (326)
+...+.+. ..+.||+++++-+.|+++||||....-++ .+..+.++ +++. .-+.+++.|.+
T Consensus 330 ~~~rl~~~---h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~~~~~~~~~l~~l~~ 393 (404)
T 1sc6_A 330 GGRRLMHI---HENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEKALQAMKA 393 (404)
T ss_dssp SSEEEEEE---EESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEECCHHHHHHHHHHHHT
T ss_pred CcceEEEE---eCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCCCCCCCHHHHHHHhc
Confidence 33444444 34789999999999999999995443332 23333333 4454 34445555543
No 85
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=51.74 E-value=23 Score=34.08 Aligned_cols=52 Identities=19% Similarity=0.250 Sum_probs=37.9
Q ss_pred CCCcccHHHHHHHHHHhCCCcEEEEEecCC-----ccEEEEEEc---cccHHHHHHHHHH
Q 020431 251 MAGVPGTANAIFGAVKDVGANVIMISQASS-----EHSVCFAVP---EKEVKAVAEALES 302 (326)
Q Consensus 251 ~~~~~~i~a~if~~L~~~~I~v~~Isq~~s-----e~sIs~~V~---~~d~~~av~~Lh~ 302 (326)
..+.||+++++-+.|++++|++..+.|-.. ...+.++.. +.++.+++..|.+
T Consensus 366 ~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~~~e~~~~~~~~~~~~ 425 (444)
T 3mtj_A 366 AFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHVTLEKNVNAAIAKIEA 425 (444)
T ss_dssp EC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECSEEHHHHHHHHHHHTT
T ss_pred ecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEeccCCHHHHHHHHHHHhc
Confidence 457899999999999999999999998532 246666654 4466666666654
No 86
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=45.87 E-value=1.1e+02 Score=27.76 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=73.1
Q ss_pred CCCeEEeeecHHHHHHHhhcCC----cccchhhHHHHHhCC-CCEEEEeccCCCCCceEEe---CCCCCCCcchhhccCC
Q 020431 160 SEAVILRTLSYQEAWEMSYFGA----NVLHPRTIIPVMRYD-IPIVIRNIFNLSVPGIMIC---RPPVDENEDEQIIDSP 231 (326)
Q Consensus 160 ~~a~~i~~ls~~e~~~l~~~g~----~v~~~~a~~~a~~~~-I~v~I~n~~~~~~~GT~I~---~~~~~~~~~~~~~~~~ 231 (326)
|+++.+..-|-.+|.++...+. --+-+ -..|..+| .++.-.+..+....-|.+. .... .
T Consensus 127 p~~~~v~~~STA~AA~~va~~~~~~~AAIas--~~AA~~Yg~L~il~~~I~D~~~N~TRFlvl~~~~~-~---------- 193 (313)
T 3mwb_A 127 PNADYVPGSSTAASAMGLLEDDAPYEAAICA--PLIAAEQPGLNVLAEDIGDNPDAVTRFILVSRPGA-L---------- 193 (313)
T ss_dssp TTCEEEECSCHHHHHHHTTSTTCSCSEEEEC--HHHHHHCTTCEEEESCCCSCTTCEEEEEEEECSCC-C----------
T ss_pred CCCEEEEcCcHHHHHHHHHhCCCCCccccCc--HHHHHHcCChhhhhhcccCCCcceeEEEEEecCCC-C----------
Confidence 5677887777888877764322 12222 23445688 8887777665444556553 2110 0
Q ss_pred eeeEEeecCeEEEEEecCCC-CCcccHHHHHHHHHHhCCCcEEEEEecCC---ccEEEEEEcc------ccHHHHHHHHH
Q 020431 232 VKGFATIDNLALVNVEGTGM-AGVPGTANAIFGAVKDVGANVIMISQASS---EHSVCFAVPE------KEVKAVAEALE 301 (326)
Q Consensus 232 v~~I~~~~~ia~IsivG~~~-~~~~~i~a~if~~L~~~~I~v~~Isq~~s---e~sIs~~V~~------~d~~~av~~Lh 301 (326)
.. ....+.+-|.+. + .+.||.+.++++.|+.+|||...|--=.+ .-...|.|+= ..+.++++.|+
T Consensus 194 ~~--~~~~~kTSl~f~---~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~eg~~~d~~v~~aL~~L~ 268 (313)
T 3mwb_A 194 PE--RTGADKTTVVVP---LPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDADGHATDSRVADALAGLH 268 (313)
T ss_dssp CC--CCSSEEEEEEEE---CSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEEESCTTSHHHHHHHHHHH
T ss_pred CC--CCCCCeEEEEEE---eCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEEeCCCCcHHHHHHHHHHH
Confidence 00 001223333333 3 37899999999999999999877751111 2345666652 34677777776
Q ss_pred H
Q 020431 302 S 302 (326)
Q Consensus 302 ~ 302 (326)
.
T Consensus 269 ~ 269 (313)
T 3mwb_A 269 R 269 (313)
T ss_dssp H
T ss_pred H
Confidence 6
No 87
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=43.26 E-value=1e+02 Score=27.56 Aligned_cols=132 Identities=10% Similarity=0.007 Sum_probs=71.9
Q ss_pred CCCeEEeeecHHHHHHHhhcCC----cccchhhHHHHHhCCCCEEEEeccCCCCCceEEe---CCCCCCCcchhhccCCe
Q 020431 160 SEAVILRTLSYQEAWEMSYFGA----NVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMIC---RPPVDENEDEQIIDSPV 232 (326)
Q Consensus 160 ~~a~~i~~ls~~e~~~l~~~g~----~v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~---~~~~~~~~~~~~~~~~v 232 (326)
|+++.+..-|-.+|.++...+. -.+-+ -..|..+|.++.-.+..+....-|++. .+...... .-.+
T Consensus 120 p~~~~~~~~sTA~AA~~va~~~~~~~AAIas--~~AA~~ygL~il~~~I~D~~~N~TRF~vl~~~~~~~~~-----~~~~ 192 (283)
T 2qmx_A 120 PQIRAEAAYDTAGSAKMVAESRDKSALAIAS--KRAGELYGLDILKENLADEEWNITRFFCIAHENNPDIS-----HLKV 192 (283)
T ss_dssp TTSEEEECSCHHHHHHHHHHTTCTTEEEEEC--HHHHHHTTCEEEESSCSSCCCCEEEEEEEEETTCCCCT-----TSSS
T ss_pred CCceEEEcCCHHHHHHHHHhCCCCCeEEeCC--HHHHHHcCCceecccCcCCCCCeeeEEEEecCcccccc-----cccc
Confidence 5677777777777777654321 12222 233456888887777665444556653 21110000 0000
Q ss_pred eeEEeecCeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC---ccEEEEEEccc------cHHHHHHHHHH
Q 020431 233 KGFATIDNLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS---EHSVCFAVPEK------EVKAVAEALES 302 (326)
Q Consensus 233 ~~I~~~~~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s---e~sIs~~V~~~------d~~~av~~Lh~ 302 (326)
.. ....+.+.|.+. +.+.||.+.++++.|+++|||...|--=.+ .-...|.|+=+ .+.++++.|+.
T Consensus 193 ~~-~~~~~ktsl~f~---~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~eg~~~d~~v~~aL~~L~~ 267 (283)
T 2qmx_A 193 RP-DVARQKTSIVFA---LPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADFIGHREDQNVHNALENLRE 267 (283)
T ss_dssp CC-EEEEEEEEEEEE---EECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEEESCTTSHHHHHHHHHHHT
T ss_pred CC-CCCCceEEEEEE---cCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEEecCCCcHHHHHHHHHHHH
Confidence 00 100233333333 236799999999999999999888751111 34567776532 35566666654
No 88
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=41.33 E-value=74 Score=26.01 Aligned_cols=70 Identities=16% Similarity=0.166 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCC
Q 020431 45 LWSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRD 124 (326)
Q Consensus 45 ~~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrg 124 (326)
--++..+++.|++.|+..... .++.| |.+...+.++++++.....+.|++|=.+.+.
T Consensus 27 D~n~~~l~~~L~~~G~~v~~~-----~iv~D--------d~~~i~~~l~~a~~~~~~DlVittGG~g~~~---------- 83 (172)
T 1mkz_A 27 DTSGHYLRDSAQEAGHHVVDK-----AIVKE--------NRYAIRAQVSAWIASDDVQVVLITGGTGLTE---------- 83 (172)
T ss_dssp CHHHHHHHHHHHHTTCEEEEE-----EEECS--------CHHHHHHHHHHHHHSSSCCEEEEESCCSSST----------
T ss_pred CccHHHHHHHHHHCCCeEeEE-----EEeCC--------CHHHHHHHHHHHHhcCCCCEEEeCCCCCCCC----------
Confidence 346788999999999975543 23333 3445567777777621246777777444333
Q ss_pred cchHHHHHHHHhhc
Q 020431 125 GSDFSAAIMGALLR 138 (326)
Q Consensus 125 gsD~~A~~lA~~l~ 138 (326)
-|++.-.++..++
T Consensus 84 -~D~t~ea~~~~~~ 96 (172)
T 1mkz_A 84 -GDQAPEALLPLFD 96 (172)
T ss_dssp -TCCHHHHHGGGCS
T ss_pred -CCCHHHHHHHHhc
Confidence 3777777766654
No 89
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=40.82 E-value=1.7e+02 Score=25.93 Aligned_cols=126 Identities=15% Similarity=0.073 Sum_probs=65.7
Q ss_pred CCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEeccCCCCCceEEeCCCCCCCcchhhccCCeeeEEeecC
Q 020431 161 EAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIFNLSVPGIMICRPPVDENEDEQIIDSPVKGFATIDN 240 (326)
Q Consensus 161 ~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~~~~~~GT~I~~~~~~~~~~~~~~~~~v~~I~~~~~ 240 (326)
+++.+..-|..+|.++...+.-.+-+ -..|..+|.++.-.+..+....-|++.--. +.. . -+ .+
T Consensus 122 ~~~~~~~~sTA~AA~~v~~~~AAIas--~~AA~~ygL~il~~~I~D~~~N~TRF~vl~----------~~~-~-~~--~~ 185 (267)
T 2qmw_A 122 QFDYDYVDSTIQSLTKIENGVAAIAP--LGSGEAYGFTPIDTHIEDYPHNVTRFLVIK----------NQQ-Q-FD--QN 185 (267)
T ss_dssp TCEEEECSSHHHHHHTCBTTEEEEEE--TTTSGGGTCCEEEECCCSCSCCEEEEEEEE----------SCC-C-CC--SS
T ss_pred CCEEEEcCCHHHHHHHHcCCCcEECC--HHHHHHCCCcEeeccccCCCCCceEEEEEe----------cCC-C-CC--CC
Confidence 45566655666665554321111111 122345677776666555434445543100 000 0 01 23
Q ss_pred eEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEEecCC---ccEEEEEEcc-----ccHHHHHHHHHH
Q 020431 241 LALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMISQASS---EHSVCFAVPE-----KEVKAVAEALES 302 (326)
Q Consensus 241 ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Isq~~s---e~sIs~~V~~-----~d~~~av~~Lh~ 302 (326)
.+.|.+.-.--.+.||.+.++++.|+++|||...|--=.+ .-...|.|+= ..+.++++.|+.
T Consensus 186 ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e~~~d~~v~~aL~~L~~ 255 (267)
T 2qmw_A 186 ATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQADSAITTDIKKVIAILET 255 (267)
T ss_dssp CSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEESCCSCHHHHHHHHHHHH
T ss_pred eEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEecCCcHHHHHHHHHHHH
Confidence 4334343200046799999999999999999888852111 2345666642 346667776655
No 90
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=39.35 E-value=88 Score=25.42 Aligned_cols=68 Identities=21% Similarity=0.231 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCc
Q 020431 46 WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDG 125 (326)
Q Consensus 46 ~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrgg 125 (326)
-|+..+++.|++.|+.+... .++.| |.+...+.+.++.......+.|++|=.+.+.
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~-----~iV~D--------d~~~i~~al~~~~a~~~~DlVittGG~g~~~----------- 95 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGY-----SLVPD--------DKIKILKAFTDALSIDEVDVIISTGGTGYSP----------- 95 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-----EEECS--------CHHHHHHHHHHHHTCTTCCEEEEESCCSSST-----------
T ss_pred chHHHHHHHHHHCCCEEEEE-----EEeCC--------CHHHHHHHHHHHHhcCCCCEEEecCCcccCC-----------
Confidence 46778999999999976554 23333 3333445555554322346777777444333
Q ss_pred chHHHHHHHHhh
Q 020431 126 SDFSAAIMGALL 137 (326)
Q Consensus 126 sD~~A~~lA~~l 137 (326)
-|++.-.++..+
T Consensus 96 ~D~t~ea~~~~~ 107 (178)
T 3iwt_A 96 TDITVETIRKLF 107 (178)
T ss_dssp TCCHHHHHGGGC
T ss_pred CCchHHHHHHhh
Confidence 377666665544
No 91
>2fts_A Gephyrin; gephyrin, neuroreceptor anchoring, structu protein; 2.41A {Rattus norvegicus} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 2fu3_A 1t3e_A
Probab=38.82 E-value=88 Score=29.63 Aligned_cols=72 Identities=19% Similarity=0.246 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcc
Q 020431 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (326)
Q Consensus 47 s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggs 126 (326)
++..+++.|++.|.....+ .++.| |.+...+.+++.++ ...+.|++|=.+. |.-
T Consensus 209 N~~~L~~~l~~~G~~v~~~-----~iv~D--------d~~~i~~~l~~a~~--~~DlVittGG~s~-----------g~~ 262 (419)
T 2fts_A 209 NRSTLLATIQEHGYPTINL-----GIVGD--------NPDDLLNALNEGIS--RADVIITSGGVSM-----------GEK 262 (419)
T ss_dssp HHHHHHHHHHTTTCCEEEE-----EEECS--------SHHHHHHHHHHHHH--HCSEEEEESCCSS-----------SCC
T ss_pred chHHHHHHHHHCCCEEEEE-----eecCC--------CHHHHHHHHHHHHh--cCCEEEEcCCCcC-----------CCc
Confidence 5678899999999976653 34443 34455677777776 3466677773222 334
Q ss_pred hHHHHHHHHhhccceEEEe
Q 020431 127 DFSAAIMGALLRAHQVTIW 145 (326)
Q Consensus 127 D~~A~~lA~~l~a~~~~~~ 145 (326)
|++...++..++. ++.||
T Consensus 263 D~t~~al~~~lg~-~~~f~ 280 (419)
T 2fts_A 263 DYLKQVLDIDLHA-QIHFG 280 (419)
T ss_dssp HHHHHHHHTTTCC-EEEES
T ss_pred ccHHHHHHHHcCC-ceEEe
Confidence 9999999888886 45555
No 92
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=37.60 E-value=93 Score=25.24 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCc
Q 020431 46 WSAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDG 125 (326)
Q Consensus 46 ~s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrgg 125 (326)
-++..+++.|++.|+..... .++.| |.+...+.++++++.....+.|++|=.+.+.
T Consensus 31 sn~~~l~~~L~~~G~~v~~~-----~iv~D--------d~~~i~~~l~~~~~~~~~DlVittGG~g~g~----------- 86 (169)
T 1y5e_A 31 KSGQLLHELLKEAGHKVTSY-----EIVKD--------DKESIQQAVLAGYHKEDVDVVLTNGGTGITK----------- 86 (169)
T ss_dssp HHHHHHHHHHHHHTCEEEEE-----EEECS--------SHHHHHHHHHHHHTCTTCSEEEEECCCSSST-----------
T ss_pred ChHHHHHHHHHHCCCeEeEE-----EEeCC--------CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC-----------
Confidence 46788999999999875543 23333 3445556777776521335667777434333
Q ss_pred chHHHHHHHHhhc
Q 020431 126 SDFSAAIMGALLR 138 (326)
Q Consensus 126 sD~~A~~lA~~l~ 138 (326)
-|++.-.++..++
T Consensus 87 ~D~t~ea~~~~~~ 99 (169)
T 1y5e_A 87 RDVTIEAVSALLD 99 (169)
T ss_dssp TCCHHHHHHTTCS
T ss_pred CCCcHHHHHHHcC
Confidence 3777777776554
No 93
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=36.49 E-value=63 Score=31.53 Aligned_cols=52 Identities=13% Similarity=0.202 Sum_probs=39.3
Q ss_pred CCCcccHHHHHHHHHHhCCCcEEEEEecCC----ccEEEEEEccccHHHHHHHHHH
Q 020431 251 MAGVPGTANAIFGAVKDVGANVIMISQASS----EHSVCFAVPEKEVKAVAEALES 302 (326)
Q Consensus 251 ~~~~~~i~a~if~~L~~~~I~v~~Isq~~s----e~sIs~~V~~~d~~~av~~Lh~ 302 (326)
..+.||+++++.+.|+++||||..+.-+-+ +.-+.+-+++.--+.+++.|.+
T Consensus 461 ~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 461 YVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQDVPDDVRTAIAA 516 (529)
T ss_dssp ESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSCCCHHHHHHHHH
T ss_pred cCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCCCCHHHHHHHhc
Confidence 368999999999999999999977653322 3334455787777778888776
No 94
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=34.50 E-value=1.9e+02 Score=26.38 Aligned_cols=94 Identities=18% Similarity=0.123 Sum_probs=51.7
Q ss_pred HhHhhccchHHHHHHHHHHHHHcCC-ceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhc-C-C-CcEEEecCccc
Q 020431 36 TDFVVGHGELWSAQMLAAVVRKNGI-DCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQ-S-P-SNTIIATGFIA 111 (326)
Q Consensus 36 ~d~i~~~GE~~s~~~~~~~L~~~Gi-~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~-~-~-~~ipVv~Gfi~ 111 (326)
+|+....||.+++++++..|...|. ....+|...--+ . +-| +.-+|.......+.+++.. . . ....|+..+.
T Consensus 97 QDr~~~~repisak~vA~lL~~~G~drvit~DlH~~qi-q-gfF-~ipvd~l~a~p~l~~~i~~~~~~~~~~vVVspd~- 172 (326)
T 3s5j_B 97 QDKKDKSRAPISAKLVANMLSVAGADHIITMDLHASQI-Q-GFF-DIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDA- 172 (326)
T ss_dssp CCSCTTSSCCCHHHHHHHHHHHHTCSEEEEESCSSGGG-G-GGC-SSCEEEECSHHHHHHHHHHHCTTGGGCEEEESSG-
T ss_pred cCCcCCCCCCEeHHHHHHHHHHcCCCEEEEEeCCChHH-H-hhc-CCceeceEcHHHHHHHHHHhcCcCCCcEEEEECC-
Confidence 4555567999999999999999998 444556544311 1 111 1112222222333334331 1 1 2334443321
Q ss_pred cCCCCCcccccCCcchHHHHHHHHhhccceEEEee
Q 020431 112 STPDNIPTTLKRDGSDFSAAIMGALLRAHQVTIWT 146 (326)
Q Consensus 112 ~~~~g~~~~lgrggsD~~A~~lA~~l~a~~~~~~t 146 (326)
|+=..|..+|..|+....++.+
T Consensus 173 -------------Ggv~~A~~lA~~L~~~~~~i~K 194 (326)
T 3s5j_B 173 -------------GGAKRVTSIADRLNVDFALIHK 194 (326)
T ss_dssp -------------GGHHHHHHHHHHHTCEEEEEEE
T ss_pred -------------CchHHHHHHHHHcCCCEEEEEE
Confidence 2355689999999987655544
No 95
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=33.96 E-value=70 Score=25.92 Aligned_cols=50 Identities=10% Similarity=0.098 Sum_probs=31.1
Q ss_pred EEeeccCcccccCCCC-CCCCeEEeeecHHHHHHHhhcCCcccchhhHHHHHhCCCCEEEEecc
Q 020431 143 TIWTDVDGVYSADPRK-VSEAVILRTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNIF 205 (326)
Q Consensus 143 ~~~tDV~Gv~~~dP~~-~~~a~~i~~ls~~e~~~l~~~g~~v~~~~a~~~a~~~~I~v~I~n~~ 205 (326)
.+.+|+||+.+..-.. .++.+.+..++..+.. +++.+++.|+++.|.++.
T Consensus 11 liv~D~DGtL~d~~~~~~~~g~~~~~f~~~D~~-------------~L~~Lk~~Gi~~~I~Tg~ 61 (168)
T 3ewi_A 11 LLVCNIDGCLTNGHIYVSGDQKEIISYDVKDAI-------------GISLLKKSGIEVRLISER 61 (168)
T ss_dssp EEEEECCCCCSCSCCBCCSSCCCEEEEEHHHHH-------------HHHHHHHTTCEEEEECSS
T ss_pred EEEEeCccceECCcEEEcCCCCEEEEEecCcHH-------------HHHHHHHCCCEEEEEeCc
Confidence 5788999999864322 2344555656554432 566667777777766544
No 96
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=33.60 E-value=1.1e+02 Score=25.53 Aligned_cols=78 Identities=15% Similarity=0.204 Sum_probs=48.4
Q ss_pred HhHhhccchHH-------HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecC
Q 020431 36 TDFVVGHGELW-------SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATG 108 (326)
Q Consensus 36 ~d~i~~~GE~~-------s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~G 108 (326)
+..|+++|.-+ ++..+++.|++.|..+... .++.| |.+..++.+++++. ....+.|++|
T Consensus 32 rvaIistGdEl~~G~~Dsn~~~L~~~L~~~G~~v~~~-----~iv~D--------d~~~I~~al~~a~~-~~~DlVIttG 97 (185)
T 3rfq_A 32 RALVVVVDDRTAHGDEDHSGPLVTELLTEAGFVVDGV-----VAVEA--------DEVDIRNALNTAVI-GGVDLVVSVG 97 (185)
T ss_dssp EEEEEEECHHHHTTCCCSHHHHHHHHHHHTTEEEEEE-----EEECS--------CHHHHHHHHHHHHH-TTCSEEEEES
T ss_pred EEEEEEECcccCCCCcCcHHHHHHHHHHHCCCEEEEE-----EEeCC--------CHHHHHHHHHHHHh-CCCCEEEECC
Confidence 34577777555 7889999999999875543 23333 34455667777663 1346777776
Q ss_pred ccccCCCCCcccccCCcchHHHHHHHHhhc
Q 020431 109 FIASTPDNIPTTLKRDGSDFSAAIMGALLR 138 (326)
Q Consensus 109 fi~~~~~g~~~~lgrggsD~~A~~lA~~l~ 138 (326)
=.+.+. -|++.-.++..++
T Consensus 98 Gts~g~-----------~D~t~eal~~l~~ 116 (185)
T 3rfq_A 98 GTGVTP-----------RDVTPESTREILD 116 (185)
T ss_dssp CCSSST-----------TCCHHHHHHTTCS
T ss_pred CCCCCC-----------cccHHHHHHHHhc
Confidence 333332 3777666666544
No 97
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=33.19 E-value=1.2e+02 Score=24.93 Aligned_cols=68 Identities=19% Similarity=0.205 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcc
Q 020431 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (326)
Q Consensus 47 s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggs 126 (326)
++..+++.|++.|...... .++.| |.+...+.++++++.....+.|++|=.+.+ .-
T Consensus 41 n~~~L~~~l~~~G~~v~~~-----~iv~D--------d~~~I~~al~~a~~~~~~DlVittGG~s~g-----------~~ 96 (178)
T 2pjk_A 41 SGDIIKQLLIENGHKIIGY-----SLVPD--------DKIKILKAFTDALSIDEVDVIISTGGTGYS-----------PT 96 (178)
T ss_dssp HHHHHHHHHHHTTCEEEEE-----EEECS--------CHHHHHHHHHHHHTCTTCCEEEEESCCSSS-----------TT
T ss_pred HHHHHHHHHHHCCCEEEEE-----EEeCC--------CHHHHHHHHHHHHhcCCCCEEEECCCCCCC-----------CC
Confidence 5678899999999975543 23333 345556777777762114677777733332 23
Q ss_pred hHHHHHHHHhhc
Q 020431 127 DFSAAIMGALLR 138 (326)
Q Consensus 127 D~~A~~lA~~l~ 138 (326)
|++.-.++..++
T Consensus 97 D~t~eal~~~~~ 108 (178)
T 2pjk_A 97 DITVETIRKLFD 108 (178)
T ss_dssp CCHHHHHGGGCS
T ss_pred cchHHHHHHHhc
Confidence 777777776654
No 98
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=31.08 E-value=86 Score=29.79 Aligned_cols=34 Identities=12% Similarity=0.044 Sum_probs=27.8
Q ss_pred CeEEEEEecCCCCCcccHHHHHHHHHHhCCCcEEEEE
Q 020431 240 NLALVNVEGTGMAGVPGTANAIFGAVKDVGANVIMIS 276 (326)
Q Consensus 240 ~ia~IsivG~~~~~~~~i~a~if~~L~~~~I~v~~Is 276 (326)
+...|.++ .++.||++++|-+.|+++|+||.-..
T Consensus 342 ~~~r~~~~---h~n~p~~~~~i~~~~~~~~~ni~~~~ 375 (416)
T 3k5p_A 342 TGTRFMHV---HENRPGILNSLMNVFSHHHINIASQF 375 (416)
T ss_dssp SSEEEEEE---ECCCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred CceEEEEE---ecCCccHHHHHHHHHHHcCCCHHHHh
Confidence 45667776 46789999999999999999997544
No 99
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=30.26 E-value=1e+02 Score=24.87 Aligned_cols=68 Identities=16% Similarity=0.195 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcc
Q 020431 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (326)
Q Consensus 47 s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggs 126 (326)
++..+++.|++.|+..... .++.| |.+...+.++++++.....+.|++|=.+.+. -
T Consensus 22 n~~~l~~~l~~~G~~v~~~-----~iv~D--------d~~~i~~~l~~~~~~~~~DlVittGG~g~g~-----------~ 77 (164)
T 2is8_A 22 THLAIREVLAGGPFEVAAY-----ELVPD--------EPPMIKKVLRLWADREGLDLILTNGGTGLAP-----------R 77 (164)
T ss_dssp HHHHHHHHHTTSSEEEEEE-----EEECS--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSST-----------T
T ss_pred hHHHHHHHHHHCCCeEeEE-----EEcCC--------CHHHHHHHHHHHHhcCCCCEEEEcCCCCCCC-----------C
Confidence 5668889999999865543 23333 3445567777777521245667776334332 3
Q ss_pred hHHHHHHHHhhc
Q 020431 127 DFSAAIMGALLR 138 (326)
Q Consensus 127 D~~A~~lA~~l~ 138 (326)
|++.-.++..++
T Consensus 78 D~t~ea~~~~~~ 89 (164)
T 2is8_A 78 DRTPEATRELLD 89 (164)
T ss_dssp CCHHHHHHTTCS
T ss_pred CChHHHHHHHhC
Confidence 888777777653
No 100
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=27.58 E-value=1.8e+02 Score=22.31 Aligned_cols=50 Identities=16% Similarity=0.188 Sum_probs=39.5
Q ss_pred ccHHHHHHHHHHhCCCcEEEEEecC-----CccEEEEEEccccHHHHHHHHHHHH
Q 020431 255 PGTANAIFGAVKDVGANVIMISQAS-----SEHSVCFAVPEKEVKAVAEALESKF 304 (326)
Q Consensus 255 ~~i~a~if~~L~~~~I~v~~Isq~~-----se~sIs~~V~~~d~~~av~~Lh~~f 304 (326)
|.-+.++-++|.+.|+..--++... ....+.++|++++++++++.+.+.-
T Consensus 15 p~kld~V~~AL~~~G~~~t~v~~~gGf~r~g~~~leivV~De~Vd~vi~~I~~~a 69 (114)
T 3m05_A 15 DKDANYLSDQFIDQNVRATKLSTTGGFLQSGNTTFMIGIEEERVPEVLEIIKKAS 69 (114)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEeccccccCCEEEEEEEcHHHHHHHHHHHHHHc
Confidence 6678899999999999974444211 1477999999999999999998864
No 101
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=25.48 E-value=2.3e+02 Score=26.63 Aligned_cols=70 Identities=14% Similarity=0.284 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcc
Q 020431 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (326)
Q Consensus 47 s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggs 126 (326)
++..+.+.|++.|.....+ .++.| |.+..++.+++.++ ...+.|++|=.+. |.-
T Consensus 205 n~~~L~~~l~~~G~~v~~~-----~iv~D--------d~~~i~~al~~a~~--~~DlvittGG~s~-----------g~~ 258 (411)
T 1g8l_A 205 NRLAVHLMLEQLGCEVINL-----GIIRD--------DPHALRAAFIEADS--QADVVISSGGVSV-----------GEA 258 (411)
T ss_dssp HHHHHHHHHHHTTCEEEEE-----EEECS--------CHHHHHHHHHHHHH--HCSEEEECSSSCS-----------SSC
T ss_pred chHHHHHHHHHCCCEEEEE-----EEeCC--------CHHHHHHHHHHHhh--cCCEEEECCCCCC-----------CCc
Confidence 5678899999999866543 34443 34455667777765 3466777773222 334
Q ss_pred hHHHHHHHHhhccceEEEe
Q 020431 127 DFSAAIMGALLRAHQVTIW 145 (326)
Q Consensus 127 D~~A~~lA~~l~a~~~~~~ 145 (326)
|++-..++.. | ++.||
T Consensus 259 D~t~~al~~~-G--~i~f~ 274 (411)
T 1g8l_A 259 DYTKTILEEL-G--EIAFW 274 (411)
T ss_dssp SHHHHHHHHH-S--EEEEE
T ss_pred ccHHHHHHhc-C--cEEEE
Confidence 8888888765 6 57776
No 102
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=23.16 E-value=1.4e+02 Score=24.04 Aligned_cols=67 Identities=9% Similarity=0.157 Sum_probs=37.6
Q ss_pred HHHHHHHH----HHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCccccc
Q 020431 47 SAQMLAAV----VRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK 122 (326)
Q Consensus 47 s~~~~~~~----L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lg 122 (326)
++..+++. |++.|+..... .++.| |.+...+.++++++. ...+.|++|=.+.+.
T Consensus 26 n~~~l~~~~~~~l~~~G~~v~~~-----~iv~D--------d~~~I~~~l~~a~~~-~~DlVittGG~g~~~-------- 83 (167)
T 2g2c_A 26 ALPLLQRLMSDELQDYSYELISE-----VVVPE--------GYDTVVEAIATALKQ-GARFIITAGGTGIRA-------- 83 (167)
T ss_dssp HHHHHHHHHCC----CEEEEEEE-----EEECS--------SHHHHHHHHHHHHHT-TCSEEEEESCCSSST--------
T ss_pred HHHHHHHhHHhHHHHCCCEEeEE-----EEeCC--------CHHHHHHHHHHHHhC-CCCEEEECCCCCCCC--------
Confidence 45677888 89888765443 23333 344556777777752 246667777434333
Q ss_pred CCcchHHHHHHHHhhc
Q 020431 123 RDGSDFSAAIMGALLR 138 (326)
Q Consensus 123 rggsD~~A~~lA~~l~ 138 (326)
-|++.-.++..++
T Consensus 84 ---~D~t~ea~~~~~~ 96 (167)
T 2g2c_A 84 ---KNQTPEATASFIH 96 (167)
T ss_dssp ---TCCHHHHHHTTCS
T ss_pred ---CcChHHHHHHHhC
Confidence 3777777776543
No 103
>1uz5_A MOEA protein, 402AA long hypothetical molybdopterin biosynthesis MOEA protein; MOEA molybdopterin, MOCF biosynthesis; 2.05A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2
Probab=22.91 E-value=1.9e+02 Score=27.10 Aligned_cols=70 Identities=16% Similarity=0.270 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcc
Q 020431 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (326)
Q Consensus 47 s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggs 126 (326)
++..+.+.|++.|.....+ .++.| |.+...+.+++.++ ...+.|++|=.+. |.-
T Consensus 208 N~~~L~~~l~~~G~~v~~~-----~iv~D--------d~~~i~~~l~~a~~--~~DlVittGG~s~-----------g~~ 261 (402)
T 1uz5_A 208 NGRALCDAINELGGEGIFM-----GVARD--------DKESLKALIEKAVN--VGDVVVISGGASG-----------GTK 261 (402)
T ss_dssp HHHHHHHHHHHHTSEEEEE-----EEECS--------SHHHHHHHHHHHHH--HCSEEEEECCC----------------
T ss_pred hHHHHHHHHHhCCCeEEEE-----EEeCC--------CHHHHHHHHHHHhh--CCCEEEEcCCCCC-----------CCc
Confidence 6678899999999865543 33443 34455677777776 3466677773222 234
Q ss_pred hHHHHHHHHhhccceEEEe
Q 020431 127 DFSAAIMGALLRAHQVTIW 145 (326)
Q Consensus 127 D~~A~~lA~~l~a~~~~~~ 145 (326)
|++-..++.. | ++.||
T Consensus 262 D~t~~al~~~-G--~~~f~ 277 (402)
T 1uz5_A 262 DLTASVIEEL-G--EVKVH 277 (402)
T ss_dssp CHHHHHHHHH-S--EEEEE
T ss_pred ccHHHHHHhh-C--CEEEe
Confidence 8888888765 6 67777
No 104
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=20.89 E-value=3.2e+02 Score=22.47 Aligned_cols=68 Identities=22% Similarity=0.276 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHH---cCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCccccc
Q 020431 46 WSAQMLAAVVRK---NGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK 122 (326)
Q Consensus 46 ~s~~~~~~~L~~---~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lg 122 (326)
-++..+++.|++ .|+..... .++.| |.+...+.++++++.....+.|++|=.+.+.
T Consensus 34 ~n~~~L~~~L~~~~~~G~~v~~~-----~iv~D--------d~~~I~~al~~a~~~~~~DlVIttGGtg~g~-------- 92 (189)
T 1jlj_A 34 RSGINLKDLVQDPSLLGGTISAY-----KIVPD--------EIEEIKETLIDWCDEKELNLILTTGGTGFAP-------- 92 (189)
T ss_dssp HHHHHHHHHHHCTTTTCCEEEEE-----EEECS--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSST--------
T ss_pred hHHHHHHHHHhchhcCCcEEEEE-----EEeCC--------CHHHHHHHHHHHhhcCCCCEEEEcCCCCCCC--------
Confidence 356788889988 78765543 23333 3445566777776521345667776333322
Q ss_pred CCcchHHHHHHHHhh
Q 020431 123 RDGSDFSAAIMGALL 137 (326)
Q Consensus 123 rggsD~~A~~lA~~l 137 (326)
-|++.-.++..+
T Consensus 93 ---~D~t~eal~~~~ 104 (189)
T 1jlj_A 93 ---RDVTPEATKEVI 104 (189)
T ss_dssp ---TCCHHHHHHHHC
T ss_pred ---cccHHHHHHHHh
Confidence 377777777664
No 105
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=20.68 E-value=3.3e+02 Score=21.74 Aligned_cols=67 Identities=16% Similarity=0.220 Sum_probs=40.0
Q ss_pred HHHHHHHHHHc-----CCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCccccc
Q 020431 48 AQMLAAVVRKN-----GIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLK 122 (326)
Q Consensus 48 ~~~~~~~L~~~-----Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lg 122 (326)
+..++..|+++ |+..... .++.| |.+...+.++++++.....+.|++|=.+.+
T Consensus 27 ~~~l~~~l~~~~~~~~G~~v~~~-----~iv~D--------d~~~i~~~l~~~~~~~~~DlVittGG~g~g--------- 84 (167)
T 1uuy_A 27 GPRAVSVVDSSSEKLGGAKVVAT-----AVVPD--------EVERIKDILQKWSDVDEMDLILTLGGTGFT--------- 84 (167)
T ss_dssp HHHHHHHHHHTTTTTTSEEEEEE-----EEECS--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSS---------
T ss_pred HHHHHHHHHhccccCCCcEEeEE-----EEcCC--------CHHHHHHHHHHHHhcCCCCEEEECCCCCCC---------
Confidence 45677888887 7654432 33333 344556677777641134667777633322
Q ss_pred CCcchHHHHHHHHhhc
Q 020431 123 RDGSDFSAAIMGALLR 138 (326)
Q Consensus 123 rggsD~~A~~lA~~l~ 138 (326)
.-|++.-.++..++
T Consensus 85 --~~D~t~~a~~~~~~ 98 (167)
T 1uuy_A 85 --PRDVTPEATKKVIE 98 (167)
T ss_dssp --TTCCHHHHHHHHCS
T ss_pred --CCCchHHHHHHHhc
Confidence 23888888888875
No 106
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=20.16 E-value=3.2e+02 Score=22.72 Aligned_cols=69 Identities=12% Similarity=0.062 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHcCCceEEEcccceeeccCCCCCCCCCCchhhHHHHHHHhhcCCCcEEEecCccccCCCCCcccccCCcc
Q 020431 47 SAQMLAAVVRKNGIDCKWMDTREVLIVNPTSSNQVDPDFSESEKRLEKWFSQSPSNTIIATGFIASTPDNIPTTLKRDGS 126 (326)
Q Consensus 47 s~~~~~~~L~~~Gi~a~~l~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~l~~~~~~ipVv~Gfi~~~~~g~~~~lgrggs 126 (326)
++..+++.|++.|...... ...++.| |.+...+.++++++.....+.|++|=.+.+..
T Consensus 24 n~~~L~~~L~~~G~~~~v~---~~~iV~D--------d~~~I~~al~~a~~~~~~DlVitTGGtg~g~~----------- 81 (195)
T 1di6_A 24 GIPALEEWLTSALTTPFEL---ETRLIPD--------EQAIIEQTLCELVDEMSCHLVLTTGGTGPARR----------- 81 (195)
T ss_dssp HHHHHHHHHHHHBCSCEEE---EEEEEES--------CHHHHHHHHHHHHHTSCCSEEEEESCCSSSTT-----------
T ss_pred HHHHHHHHHHHcCCCCceE---EEEEeCC--------CHHHHHHHHHHHHhcCCCCEEEECCCCCCCCC-----------
Confidence 5678899999999873111 1223333 34455667777765212456677774444333
Q ss_pred hHHHHHHHHhh
Q 020431 127 DFSAAIMGALL 137 (326)
Q Consensus 127 D~~A~~lA~~l 137 (326)
|++.-.++..+
T Consensus 82 D~T~ea~~~~~ 92 (195)
T 1di6_A 82 DVTPDATLAVA 92 (195)
T ss_dssp CCHHHHHHHTC
T ss_pred ccHHHHHHHHh
Confidence 66666666554
Done!