BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020432
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NUT3|MFS12_HUMAN Major facilitator superfamily domain-containing protein 12 OS=Homo
sapiens GN=MFSD12 PE=2 SV=2
Length = 480
Score = 115 bits (287), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 138/269 (51%), Gaps = 25/269 (9%)
Query: 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV---STAKTHADLE--NQ--------YR 54
N +V LT+ R AFT+VAN+++Y A+++ + S + D+ +Q +R
Sbjct: 159 NDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSSRVEPTQDISISDQLGGQDVPVFR 218
Query: 55 WIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARIS----------WAYWFKKILYY 104
++ + +G F +F T E R H + W +W ++ +Y
Sbjct: 219 NLSLLVVGVGAVFSLLFHLGTRERRRPHAEEPGEHTPLLAPATAQPLLLWKHWLREPAFY 278
Query: 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG 164
QV ++YM TRL+VN+SQ Y+A Y+ L + + A +P ++Y+ F+ S L++ +
Sbjct: 279 QVGILYMTTRLIVNLSQTYMAMYLTYSLHLPKKFIATIPLVMYLSGFLSSFLMKPINKCI 338
Query: 165 QRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 224
R Y+S G+L + A + L + +Y A+ +G A ++VT ++M L+G
Sbjct: 339 GRNMTYFS--GLLVILAFAAWVALAEGLGVAVYAAAVLLGAGCATILVTSLAMTADLIGP 396
Query: 225 DLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253
+ AFV G++SFLDK++ G+AV +QS
Sbjct: 397 HTNSGAFVYGSMSFLDKVANGLAVMAIQS 425
>sp|Q3U481|MFS12_MOUSE Major facilitator superfamily domain-containing protein 12 OS=Mus
musculus GN=Mfsd12 PE=2 SV=1
Length = 476
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 137/268 (51%), Gaps = 24/268 (8%)
Query: 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSV-STAKTHADLE--NQ--------YRWI 56
+ +V LT+ R AFT+VAN+++Y A+++ + +A D+ +Q +R +
Sbjct: 156 SDHEKVELTALRYAFTVVANITVYGAAWLLLHLQGSAHGEQDISVGDQLGVQDVPVFRNL 215
Query: 57 AYSSIFIGCCFVGIFLSRTEEPRLKM--GLRGNSHARIS---------WAYWFKKILYYQ 105
A + +G F +F T+E G N H + W +W ++ +YQ
Sbjct: 216 ALLVVGVGAIFSLLFHLGTKEGHRSQHWGNEPNEHTPLVAPAAQPLLLWKHWLREPAFYQ 275
Query: 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQ 165
V ++YM TRL+VN+SQ Y+A Y+ L + + A +P ++Y+ F S L++ +
Sbjct: 276 VGMLYMTTRLIVNLSQTYIAMYLTYSLSLPKKFIATIPLVMYLSGFFSSFLMKPVNRRIG 335
Query: 166 RLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225
R Y++ G+L + A + L N+ +Y A+ +G A ++VT ++M L+G
Sbjct: 336 RNMTYFT--GLLVILAFAAWVALADNLGVAVYGAAVLLGAGCATILVTSLAMTADLIGPH 393
Query: 226 LSGCAFVCGTLSFLDKMSCGIAVYVLQS 253
AFV G +SF DK++ G+AV +QS
Sbjct: 394 THSGAFVYGAMSFSDKVANGLAVMAVQS 421
>sp|Q6FDN3|GLPK_ACIAD Glycerol kinase OS=Acinetobacter sp. (strain ADP1) GN=glpK PE=3
SV=1
Length = 495
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
Query: 128 VINDLRMGQSAKALVPAIIYI-------CSFIVS--ILLQEMAWTGQRLKAYYSAGGVLW 178
V+ D R G KAL PAII+ C+ ++ +L+Q TG R+ Y+SAG ++W
Sbjct: 85 VVWDKRTG---KALAPAIIWQDRRAAQWCNTLIENGMLVQVQQKTGLRIDPYFSAGKLVW 141
Query: 179 VFCG-AGILIL 188
+ AG IL
Sbjct: 142 LLENIAGFRIL 152
>sp|Q5ZLW3|DYM_CHICK Dymeclin OS=Gallus gallus GN=DYM PE=2 SV=1
Length = 669
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 44 KTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82
K A+ +N + W A++++FI CC + +F+SR E L++
Sbjct: 89 KISAECQNHLFIWQAHNALFIICCLLKVFISRMSEEELQL 128
>sp|Q6DCP6|DYM_XENLA Dymeclin OS=Xenopus laevis GN=dym PE=2 SV=1
Length = 669
Score = 32.3 bits (72), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 44 KTHADLENQ-YRWIAYSSIFIGCCFVGIFLSRTEEPRL 80
K A+ +NQ + W A++++FI CC + +F S+ E L
Sbjct: 89 KISAECQNQLFIWQAHNALFIICCLIKVFTSQVSEEEL 126
>sp|P74168|Y1374_SYNY3 Uncharacterized symporter sll1374 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1374 PE=3 SV=1
Length = 544
Score = 31.6 bits (70), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 109 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168
+Y+ + L V ++ + L ++V++ + + + + + + ++ + Q +A + K
Sbjct: 324 IYLCSWLAVQLTASILVYFVVSWMGLNEQQSGTIALAVQGTALVMLFVWQALAQFLDK-K 382
Query: 169 AYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIA 206
Y G ++W+ AG+ ++ A +Y LAIF G+
Sbjct: 383 VIYFLGSMVWMGAEAGLWLVQPGQVALLYTLAIFAGVG 420
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,794,157
Number of Sequences: 539616
Number of extensions: 3652495
Number of successful extensions: 11430
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 11418
Number of HSP's gapped (non-prelim): 31
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 61 (28.1 bits)