Query 020432
Match_columns 326
No_of_seqs 129 out of 1173
Neff 8.7
Searched_HMMs 46136
Date Fri Mar 29 09:41:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020432.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020432hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2211 MelB Na+/melibiose sym 100.0 6E-54 1.3E-58 406.6 14.9 309 1-326 136-452 (467)
2 PRK11462 putative transporter; 100.0 1.3E-42 2.9E-47 336.9 19.3 305 1-325 133-443 (460)
3 PRK09669 putative symporter Ya 100.0 2.3E-41 4.9E-46 326.9 18.0 307 1-326 133-444 (444)
4 PF13347 MFS_2: MFS/sugar tran 100.0 3.5E-41 7.6E-46 324.1 17.4 296 1-314 127-428 (428)
5 PRK10429 melibiose:sodium symp 100.0 2.5E-41 5.3E-46 329.3 16.2 306 1-325 130-448 (473)
6 PRK09848 glucuronide transport 100.0 7E-36 1.5E-40 288.8 16.0 304 1-325 133-442 (448)
7 TIGR00792 gph sugar (Glycoside 100.0 3.1E-35 6.8E-40 282.4 17.9 306 1-326 123-436 (437)
8 PRK10504 putative transporter; 99.8 1.1E-19 2.4E-24 176.6 18.6 240 59-325 227-468 (471)
9 KOG4830 Predicted sugar transp 99.8 2.3E-20 4.9E-25 162.0 9.5 253 47-316 147-401 (412)
10 PF11700 ATG22: Vacuole efflux 99.8 1.4E-16 3.1E-21 154.8 24.3 275 12-318 186-475 (477)
11 TIGR00900 2A0121 H+ Antiporter 99.6 1.4E-14 3.1E-19 134.7 19.9 239 3-256 118-362 (365)
12 PRK10473 multidrug efflux syst 99.6 6.3E-14 1.4E-18 133.0 23.5 231 7-254 120-350 (392)
13 TIGR00901 2A0125 AmpG-related 99.6 4.1E-14 8.8E-19 132.4 18.4 230 2-238 108-352 (356)
14 TIGR00883 2A0106 metabolite-pr 99.6 2.3E-13 5E-18 127.7 22.8 243 8-256 126-374 (394)
15 TIGR00893 2A0114 d-galactonate 99.6 5.6E-13 1.2E-17 124.7 21.0 239 8-259 112-375 (399)
16 PRK11273 glpT sn-glycerol-3-ph 99.5 1.4E-12 3.1E-17 126.4 22.5 236 8-255 150-408 (452)
17 TIGR00890 2A0111 Oxalate/Forma 99.5 8E-13 1.7E-17 123.3 19.5 238 9-260 121-360 (377)
18 PRK15402 multidrug efflux syst 99.5 5.7E-12 1.2E-16 120.2 24.7 200 51-254 164-367 (406)
19 PRK10489 enterobactin exporter 99.5 3.6E-12 7.7E-17 122.1 21.6 234 9-259 141-376 (417)
20 TIGR00881 2A0104 phosphoglycer 99.5 2.3E-12 4.9E-17 120.3 18.2 241 8-260 113-375 (379)
21 TIGR00886 2A0108 nitrite extru 99.5 1.6E-12 3.5E-17 121.6 17.0 232 8-243 120-365 (366)
22 TIGR00710 efflux_Bcr_CflA drug 99.5 9.8E-12 2.1E-16 116.9 21.6 230 9-252 124-356 (385)
23 PRK11010 ampG muropeptide tran 99.5 1.8E-11 3.9E-16 120.1 24.2 240 8-260 137-381 (491)
24 PRK09874 drug efflux system pr 99.4 4.9E-11 1.1E-15 113.3 24.9 233 8-256 136-372 (408)
25 PRK14995 methyl viologen resis 99.4 1.5E-11 3.3E-16 120.6 21.4 233 7-254 124-410 (495)
26 PRK11902 ampG muropeptide tran 99.4 5.6E-11 1.2E-15 113.4 24.4 163 3-177 120-285 (402)
27 PRK11663 regulatory protein Uh 99.4 2.5E-11 5.5E-16 117.0 21.9 240 8-259 141-401 (434)
28 PRK03545 putative arabinose tr 99.4 4.3E-11 9.3E-16 113.6 23.2 228 8-256 127-354 (390)
29 PF07690 MFS_1: Major Facilita 99.4 1.9E-12 4.1E-17 119.9 13.1 230 4-247 112-351 (352)
30 TIGR01301 GPH_sucrose GPH fami 99.4 1.8E-10 3.8E-15 111.9 27.1 255 1-255 138-442 (477)
31 TIGR00897 2A0118 polyol permea 99.4 7.7E-11 1.7E-15 112.5 24.0 237 8-259 135-378 (402)
32 TIGR00891 2A0112 putative sial 99.4 2.5E-11 5.4E-16 114.7 19.5 240 8-260 130-394 (405)
33 PRK09556 uhpT sugar phosphate 99.4 1.3E-11 2.8E-16 120.2 17.3 239 8-256 152-411 (467)
34 PRK11551 putative 3-hydroxyphe 99.4 1.4E-10 3.1E-15 110.4 23.4 233 8-256 133-369 (406)
35 TIGR00903 2A0129 major facilit 99.4 1.2E-10 2.7E-15 110.0 22.5 228 9-255 109-340 (368)
36 TIGR00711 efflux_EmrB drug res 99.4 3.3E-11 7.2E-16 117.2 19.0 157 96-255 250-408 (485)
37 PRK08633 2-acyl-glycerophospho 99.4 7.3E-11 1.6E-15 126.7 22.4 241 3-250 129-377 (1146)
38 TIGR00899 2A0120 sugar efflux 99.4 1E-10 2.2E-15 109.7 20.7 200 51-259 152-351 (375)
39 TIGR00896 CynX cyanate transpo 99.3 8.8E-11 1.9E-15 109.9 19.4 234 9-259 117-350 (355)
40 PRK11652 emrD multidrug resist 99.3 1.8E-10 4E-15 109.3 21.5 227 10-254 128-357 (394)
41 PRK09528 lacY galactoside perm 99.3 3.2E-10 6.8E-15 108.8 23.3 165 91-260 213-381 (420)
42 TIGR00712 glpT glycerol-3-phos 99.3 5.2E-10 1.1E-14 108.0 24.0 241 8-260 148-411 (438)
43 PRK09952 shikimate transporter 99.3 2.7E-10 5.9E-15 110.1 21.4 242 8-255 155-404 (438)
44 TIGR00895 2A0115 benzoate tran 99.3 1E-10 2.2E-15 110.0 17.6 230 9-254 136-397 (398)
45 PRK09705 cynX putative cyanate 99.3 3.9E-10 8.5E-15 107.4 20.2 227 10-256 128-354 (393)
46 TIGR00882 2A0105 oligosacchari 99.3 5.6E-10 1.2E-14 106.2 21.2 165 91-260 205-373 (396)
47 PRK11102 bicyclomycin/multidru 99.3 1.3E-09 2.7E-14 102.6 23.3 158 8-177 109-269 (377)
48 PRK06814 acylglycerophosphoeth 99.3 7.8E-10 1.7E-14 118.9 23.9 237 3-254 134-393 (1140)
49 PRK10406 alpha-ketoglutarate t 99.3 2.7E-09 5.8E-14 102.9 25.2 227 8-242 154-383 (432)
50 TIGR02718 sider_RhtX_FptX side 99.3 6.6E-10 1.4E-14 105.5 20.5 238 8-260 127-369 (390)
51 cd06174 MFS The Major Facilita 99.3 2.4E-10 5.2E-15 105.2 17.0 213 4-256 114-326 (352)
52 PRK15075 citrate-proton sympor 99.3 2.2E-09 4.7E-14 103.6 23.5 246 8-259 147-396 (434)
53 PRK15011 sugar efflux transpor 99.3 2.4E-09 5.2E-14 101.8 23.5 221 14-255 143-364 (393)
54 TIGR00902 2A0127 phenyl propri 99.2 1.1E-09 2.4E-14 103.8 20.2 157 91-254 195-352 (382)
55 PRK11646 multidrug resistance 99.2 2.3E-09 4.9E-14 102.4 21.4 229 8-256 129-358 (400)
56 PLN00028 nitrate transmembrane 99.2 1.4E-09 3E-14 106.4 20.3 234 8-246 153-398 (476)
57 PRK10642 proline/glycine betai 99.2 3.1E-09 6.7E-14 104.2 22.5 239 9-254 149-401 (490)
58 PRK12307 putative sialic acid 99.2 1.1E-09 2.4E-14 104.9 18.4 231 8-255 136-381 (426)
59 PF05977 MFS_3: Transmembrane 99.2 2.1E-09 4.6E-14 105.9 20.6 235 3-254 129-366 (524)
60 TIGR00894 2A0114euk Na(+)-depe 99.2 2.2E-09 4.7E-14 104.4 20.5 234 8-254 161-419 (465)
61 PRK11128 putative 3-phenylprop 99.2 2.8E-09 6.2E-14 100.9 20.8 227 10-254 124-352 (382)
62 PRK03699 putative transporter; 99.2 5.1E-09 1.1E-13 99.6 22.5 151 100-256 204-354 (394)
63 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.9E-09 4.2E-14 103.3 19.5 242 8-258 126-396 (412)
64 PRK05122 major facilitator sup 99.2 6.5E-09 1.4E-13 98.7 22.7 222 8-256 142-363 (399)
65 PRK10213 nepI ribonucleoside t 99.2 5.8E-09 1.3E-13 99.4 22.3 230 8-259 138-368 (394)
66 COG2271 UhpC Sugar phosphate p 99.2 3.6E-09 7.9E-14 99.0 19.4 236 9-254 148-406 (448)
67 PRK11195 lysophospholipid tran 99.2 8.5E-09 1.8E-13 98.3 22.6 234 3-254 114-353 (393)
68 PF03209 PUCC: PUCC protein; 99.2 3.9E-09 8.4E-14 98.9 19.1 242 7-258 118-364 (403)
69 COG2814 AraJ Arabinose efflux 99.1 4.9E-09 1.1E-13 98.6 19.6 234 9-261 132-365 (394)
70 PRK10091 MFS transport protein 99.1 9.3E-09 2E-13 97.4 21.0 228 8-256 121-349 (382)
71 TIGR00892 2A0113 monocarboxyla 99.1 1.8E-09 3.9E-14 104.9 16.3 235 9-257 138-395 (455)
72 TIGR00889 2A0110 nucleoside tr 99.1 5.8E-09 1.3E-13 100.3 19.4 161 93-257 200-371 (418)
73 TIGR00885 fucP L-fucose:H+ sym 99.1 2.8E-08 6.2E-13 95.3 23.9 240 8-256 124-380 (410)
74 PRK15403 multidrug efflux syst 99.1 2.6E-08 5.6E-13 95.6 22.8 231 8-254 134-370 (413)
75 PRK10054 putative transporter; 99.1 3.7E-09 7.9E-14 100.8 16.8 234 8-259 126-361 (395)
76 PRK12382 putative transporter; 99.1 1.2E-08 2.5E-13 96.9 19.7 226 8-260 142-367 (392)
77 TIGR00898 2A0119 cation transp 99.1 2.3E-08 5E-13 98.1 21.5 153 93-252 315-467 (505)
78 PRK11043 putative transporter; 99.0 6E-08 1.3E-12 92.2 22.6 196 51-255 157-355 (401)
79 COG2270 Permeases of the major 99.0 4E-08 8.6E-13 92.2 20.4 240 7-254 146-400 (438)
80 TIGR01272 gluP glucose/galacto 99.0 7.8E-08 1.7E-12 88.8 21.7 239 8-254 40-287 (310)
81 PRK15034 nitrate/nitrite trans 99.0 5.2E-08 1.1E-12 94.3 20.5 206 8-223 157-375 (462)
82 TIGR00879 SP MFS transporter, 99.0 1.6E-08 3.5E-13 97.1 17.1 131 121-255 304-443 (481)
83 PRK10133 L-fucose transporter; 99.0 1E-07 2.2E-12 92.2 22.1 157 90-254 247-404 (438)
84 PRK03633 putative MFS family t 99.0 9.6E-08 2.1E-12 90.4 20.8 155 93-256 192-346 (381)
85 PRK10077 xylE D-xylose transpo 99.0 5.8E-08 1.3E-12 94.4 19.6 243 3-253 146-422 (479)
86 PRK03893 putative sialic acid 99.0 5.5E-08 1.2E-12 95.1 19.1 136 121-259 295-430 (496)
87 KOG2532 Permease of the major 98.9 4.8E-08 1E-12 94.9 17.4 235 9-255 159-417 (466)
88 KOG2533 Permease of the major 98.8 8.2E-08 1.8E-12 93.7 15.4 213 8-227 164-401 (495)
89 PRK10489 enterobactin exporter 98.8 8E-08 1.7E-12 92.0 14.7 163 89-255 5-170 (417)
90 PF03825 Nuc_H_symport: Nucleo 98.8 9E-07 2E-11 84.6 21.5 162 92-257 198-364 (400)
91 TIGR00887 2A0109 phosphate:H+ 98.8 6.3E-07 1.4E-11 88.2 18.8 244 8-256 145-453 (502)
92 TIGR00900 2A0121 H+ Antiporter 98.8 1.4E-07 3.1E-12 87.5 13.4 145 106-254 4-151 (365)
93 TIGR00886 2A0108 nitrite extru 98.7 3.6E-07 7.9E-12 85.3 15.8 145 103-252 3-147 (366)
94 PF07690 MFS_1: Major Facilita 98.7 3.5E-07 7.6E-12 84.5 15.4 142 108-254 3-144 (352)
95 TIGR00788 fbt folate/biopterin 98.7 1E-07 2.2E-12 93.0 12.3 164 93-259 244-415 (468)
96 TIGR01299 synapt_SV2 synaptic 98.7 3.6E-06 7.7E-11 86.3 22.4 105 145-254 603-707 (742)
97 PRK05122 major facilitator sup 98.7 4.4E-07 9.6E-12 86.2 14.7 151 99-252 13-169 (399)
98 PRK09584 tppB putative tripept 98.7 1.2E-06 2.5E-11 86.4 17.6 154 99-255 18-174 (500)
99 PRK10207 dipeptide/tripeptide 98.7 1.7E-06 3.8E-11 84.9 18.5 156 97-254 263-438 (489)
100 COG2223 NarK Nitrate/nitrite t 98.6 7.5E-07 1.6E-11 83.6 14.5 155 22-186 147-302 (417)
101 PRK10054 putative transporter; 98.6 1.3E-06 2.8E-11 83.4 16.0 148 102-254 8-155 (395)
102 TIGR00924 yjdL_sub1_fam amino 98.6 6.1E-06 1.3E-10 80.8 20.4 146 106-253 277-439 (475)
103 PRK12382 putative transporter; 98.6 1.4E-06 3E-11 82.6 15.3 152 100-254 14-171 (392)
104 TIGR00924 yjdL_sub1_fam amino 98.6 2.4E-06 5.2E-11 83.6 17.1 151 101-254 10-164 (475)
105 PRK10207 dipeptide/tripeptide 98.6 9.1E-07 2E-11 86.9 13.9 153 99-254 12-166 (489)
106 TIGR00895 2A0115 benzoate tran 98.6 1.9E-06 4.2E-11 80.8 15.7 131 119-255 35-165 (398)
107 PF05977 MFS_3: Transmembrane 98.6 1.4E-06 2.9E-11 86.1 14.7 154 97-254 6-162 (524)
108 TIGR00710 efflux_Bcr_CflA drug 98.6 1.5E-06 3.3E-11 81.5 14.5 150 99-254 2-152 (385)
109 PRK11646 multidrug resistance 98.6 2.7E-06 5.8E-11 81.3 16.0 146 104-254 13-158 (400)
110 PRK09528 lacY galactoside perm 98.5 1.9E-06 4E-11 82.7 14.3 158 96-254 5-164 (420)
111 PRK15462 dipeptide/tripeptide 98.5 3.2E-06 6.8E-11 82.8 15.4 151 99-252 7-159 (493)
112 TIGR00711 efflux_EmrB drug res 98.5 6.5E-06 1.4E-10 80.0 17.0 144 105-254 6-149 (485)
113 PRK08633 2-acyl-glycerophospho 98.5 3.4E-06 7.3E-11 90.9 16.0 158 95-255 3-163 (1146)
114 PRK11195 lysophospholipid tran 98.5 2.8E-06 6E-11 81.0 13.7 146 100-254 2-147 (393)
115 TIGR00899 2A0120 sugar efflux 98.5 5E-06 1.1E-10 77.8 15.3 146 107-254 3-148 (375)
116 PRK06814 acylglycerophosphoeth 98.5 4.8E-06 1E-10 89.8 17.1 157 95-255 5-168 (1140)
117 TIGR02332 HpaX 4-hydroxyphenyl 98.5 5.5E-06 1.2E-10 79.5 15.4 142 107-254 14-155 (412)
118 COG2807 CynX Cyanate permease 98.4 2.1E-05 4.5E-10 72.8 17.9 196 51-259 162-361 (395)
119 TIGR00885 fucP L-fucose:H+ sym 98.4 5.1E-06 1.1E-10 79.8 14.4 150 101-254 3-153 (410)
120 TIGR00881 2A0104 phosphoglycer 98.4 2.9E-06 6.3E-11 79.0 12.4 136 110-251 4-139 (379)
121 PRK11652 emrD multidrug resist 98.4 8.2E-06 1.8E-10 77.4 15.4 149 99-253 3-154 (394)
122 PRK11043 putative transporter; 98.4 1.4E-05 3.1E-10 75.9 17.0 138 112-254 14-153 (401)
123 TIGR00893 2A0114 d-galactonate 98.4 2.5E-06 5.5E-11 79.5 11.4 129 120-254 13-141 (399)
124 TIGR00891 2A0112 putative sial 98.4 1.1E-05 2.3E-10 76.1 15.7 144 105-254 16-159 (405)
125 PRK15011 sugar efflux transpor 98.4 1.4E-05 3.1E-10 76.0 16.4 153 100-254 14-166 (393)
126 PRK03545 putative arabinose tr 98.4 1.2E-05 2.6E-10 76.3 15.4 125 123-253 31-155 (390)
127 TIGR00882 2A0105 oligosacchari 98.4 1.4E-05 3.1E-10 75.9 15.7 150 100-254 1-156 (396)
128 COG0738 FucP Fucose permease [ 98.3 0.00017 3.8E-09 67.7 21.9 153 93-254 228-381 (422)
129 PRK11902 ampG muropeptide tran 98.3 2.3E-05 4.9E-10 74.8 16.7 143 107-254 5-153 (402)
130 PRK11663 regulatory protein Uh 98.3 1.1E-05 2.3E-10 77.9 14.6 143 106-254 28-170 (434)
131 TIGR00712 glpT glycerol-3-phos 98.3 8.5E-06 1.9E-10 78.7 13.7 150 99-253 25-176 (438)
132 PRK10504 putative transporter; 98.3 1.5E-05 3.2E-10 77.6 15.4 147 102-254 11-157 (471)
133 PF01306 LacY_symp: LacY proto 98.3 0.00012 2.5E-09 69.9 20.6 160 91-255 210-373 (412)
134 TIGR01299 synapt_SV2 synaptic 98.3 2E-05 4.2E-10 80.9 16.4 128 121-254 187-314 (742)
135 KOG1330 Sugar transporter/spin 98.3 3.4E-06 7.4E-11 80.1 9.7 160 124-315 55-214 (493)
136 PRK10473 multidrug efflux syst 98.3 2.5E-05 5.4E-10 74.0 15.8 148 100-253 2-149 (392)
137 cd06174 MFS The Major Facilita 98.3 9.8E-06 2.1E-10 74.4 12.4 144 106-255 4-147 (352)
138 KOG2504 Monocarboxylate transp 98.3 0.00011 2.3E-09 72.5 19.9 159 95-259 292-452 (509)
139 TIGR00792 gph sugar (Glycoside 98.3 2.9E-06 6.3E-11 81.4 8.3 138 112-251 10-156 (437)
140 PRK10091 MFS transport protein 98.3 3.3E-05 7.3E-10 73.1 15.5 145 102-252 4-148 (382)
141 PRK09556 uhpT sugar phosphate 98.2 3.9E-05 8.4E-10 74.8 15.9 140 110-253 38-180 (467)
142 PRK14995 methyl viologen resis 98.2 6E-05 1.3E-09 74.1 17.0 146 104-255 9-155 (495)
143 PRK03633 putative MFS family t 98.2 2.5E-05 5.4E-10 73.9 13.5 149 100-254 5-153 (381)
144 TIGR00805 oat sodium-independe 98.2 3.6E-05 7.7E-10 78.0 15.2 158 8-165 202-395 (633)
145 PF06609 TRI12: Fungal trichot 98.2 0.00021 4.5E-09 71.3 20.1 153 95-249 303-459 (599)
146 PRK03699 putative transporter; 98.2 6.4E-05 1.4E-09 71.5 15.8 140 108-253 14-153 (394)
147 PRK11273 glpT sn-glycerol-3-ph 98.2 3.7E-05 8.1E-10 74.6 14.4 125 121-250 49-175 (452)
148 PRK11010 ampG muropeptide tran 98.2 0.00014 3E-09 71.5 18.3 154 96-254 7-166 (491)
149 KOG2563 Permease of the major 98.2 2.3E-05 5E-10 74.4 11.7 206 8-222 170-388 (480)
150 PRK10429 melibiose:sodium symp 98.2 1.2E-05 2.5E-10 78.6 10.3 131 110-243 15-155 (473)
151 KOG3764 Vesicular amine transp 98.1 1.1E-05 2.4E-10 75.3 9.2 225 7-246 189-414 (464)
152 PRK10213 nepI ribonucleoside t 98.1 7.8E-05 1.7E-09 71.0 15.3 127 122-254 41-167 (394)
153 PF03092 BT1: BT1 family; Int 98.1 9.2E-06 2E-10 78.6 9.0 235 6-254 116-377 (433)
154 PRK11102 bicyclomycin/multidru 98.1 3.3E-05 7.1E-10 72.6 12.3 131 118-254 8-138 (377)
155 PRK15402 multidrug efflux syst 98.1 0.00011 2.5E-09 69.9 16.1 131 118-254 30-160 (406)
156 PLN00028 nitrate transmembrane 98.1 0.0001 2.3E-09 72.1 16.0 120 127-252 61-180 (476)
157 PF13347 MFS_2: MFS/sugar tran 98.1 2.6E-06 5.6E-11 82.0 4.6 142 112-255 12-164 (428)
158 PRK10077 xylE D-xylose transpo 98.1 6.9E-05 1.5E-09 72.8 14.3 108 138-248 56-173 (479)
159 PRK11551 putative 3-hydroxyphe 98.1 0.00011 2.4E-09 69.8 15.4 133 112-250 26-158 (406)
160 PRK12307 putative sialic acid 98.1 0.00012 2.5E-09 70.1 15.6 124 122-250 38-161 (426)
161 TIGR00897 2A0118 polyol permea 98.1 9E-05 2E-09 70.7 14.6 146 105-254 17-165 (402)
162 PRK09584 tppB putative tripept 98.1 0.00027 5.9E-09 69.7 18.3 84 169-254 351-441 (500)
163 PRK10133 L-fucose transporter; 98.1 9.1E-05 2E-09 71.7 14.6 145 102-250 27-172 (438)
164 TIGR00901 2A0125 AmpG-related 98.1 0.00011 2.4E-09 68.5 14.7 132 121-257 8-145 (356)
165 PRK09874 drug efflux system pr 98.1 0.00015 3.2E-09 68.7 15.7 146 102-254 15-165 (408)
166 TIGR00880 2_A_01_02 Multidrug 98.0 4.7E-05 1E-09 60.1 9.6 104 147-255 8-111 (141)
167 PRK11462 putative transporter; 98.0 5E-05 1.1E-09 74.0 11.4 139 110-250 18-165 (460)
168 PRK09669 putative symporter Ya 98.0 1.7E-05 3.6E-10 76.8 7.2 135 113-249 21-164 (444)
169 PRK03893 putative sialic acid 98.0 0.00017 3.6E-09 70.5 14.2 143 105-253 24-166 (496)
170 TIGR00806 rfc RFC reduced fola 98.0 0.0028 6.1E-08 61.5 21.9 228 8-246 144-404 (511)
171 PRK10406 alpha-ketoglutarate t 98.0 0.00032 7E-09 67.5 15.9 101 145-248 71-177 (432)
172 PRK09952 shikimate transporter 98.0 0.00047 1E-08 66.7 16.9 146 103-252 24-182 (438)
173 TIGR00805 oat sodium-independe 97.9 6.5E-05 1.4E-09 76.2 10.7 125 127-255 58-232 (633)
174 TIGR00879 SP MFS transporter, 97.9 0.00014 3E-09 69.8 12.0 112 137-251 71-183 (481)
175 PRK15403 multidrug efflux syst 97.9 0.00041 8.9E-09 66.6 15.1 134 114-253 29-162 (413)
176 TIGR00889 2A0110 nucleoside tr 97.9 0.00095 2.1E-08 64.2 17.4 111 105-217 6-116 (418)
177 TIGR00887 2A0109 phosphate:H+ 97.9 0.00045 9.8E-09 68.0 15.5 112 139-253 58-173 (502)
178 PRK11128 putative 3-phenylprop 97.9 0.00061 1.3E-08 64.5 15.8 145 105-255 8-152 (382)
179 PF01306 LacY_symp: LacY proto 97.9 4E-05 8.6E-10 73.1 7.5 153 98-254 4-161 (412)
180 TIGR00890 2A0111 Oxalate/Forma 97.9 0.0004 8.8E-09 64.4 14.2 124 122-252 24-147 (377)
181 COG2211 MelB Na+/melibiose sym 97.8 5.9E-05 1.3E-09 72.8 8.0 144 109-254 20-172 (467)
182 TIGR00894 2A0114euk Na(+)-depe 97.8 0.00013 2.8E-09 70.9 10.0 113 139-254 78-190 (465)
183 TIGR01301 GPH_sucrose GPH fami 97.8 0.00052 1.1E-08 67.0 14.1 144 107-252 10-173 (477)
184 KOG0569 Permease of the major 97.8 0.004 8.7E-08 60.7 19.8 215 4-229 143-404 (485)
185 PRK15034 nitrate/nitrite trans 97.7 0.0013 2.7E-08 64.1 15.9 132 101-236 34-168 (462)
186 COG3104 PTR2 Dipeptide/tripept 97.7 0.00025 5.4E-09 68.3 10.5 129 99-229 19-154 (498)
187 TIGR00902 2A0127 phenyl propri 97.7 0.0022 4.8E-08 60.7 16.5 147 104-256 7-153 (382)
188 KOG4686 Predicted sugar transp 97.7 0.0013 2.9E-08 59.2 13.6 154 100-259 263-416 (459)
189 PRK10642 proline/glycine betai 97.6 0.0028 6E-08 62.2 17.0 104 145-251 65-174 (490)
190 PF11700 ATG22: Vacuole efflux 97.6 0.0029 6.3E-08 62.0 16.1 83 144-226 74-159 (477)
191 COG2271 UhpC Sugar phosphate p 97.6 0.0022 4.8E-08 60.7 14.2 118 130-252 57-174 (448)
192 PRK09705 cynX putative cyanate 97.5 0.0017 3.8E-08 61.7 13.6 127 121-254 29-155 (393)
193 TIGR00903 2A0129 major facilit 97.5 0.0026 5.6E-08 60.2 14.2 121 128-254 17-137 (368)
194 TIGR00892 2A0113 monocarboxyla 97.5 0.0017 3.7E-08 63.1 12.9 127 121-254 39-166 (455)
195 TIGR00896 CynX cyanate transpo 97.4 0.0018 4E-08 60.3 11.8 126 121-254 20-145 (355)
196 PRK09848 glucuronide transport 97.4 0.00095 2.1E-08 64.6 9.6 117 111-227 18-144 (448)
197 PTZ00207 hypothetical protein; 97.4 0.0057 1.2E-07 61.3 15.2 118 127-249 52-173 (591)
198 KOG2816 Predicted transporter 97.4 0.003 6.4E-08 61.6 12.8 238 3-254 135-389 (463)
199 TIGR00883 2A0106 metabolite-pr 97.3 0.002 4.4E-08 60.1 11.1 102 148-252 46-153 (394)
200 TIGR02718 sider_RhtX_FptX side 97.3 0.0091 2E-07 56.5 15.0 148 103-254 3-156 (390)
201 PRK15462 dipeptide/tripeptide 97.3 0.029 6.3E-07 55.2 18.5 82 171-254 348-437 (493)
202 PF06963 FPN1: Ferroportin1 (F 97.3 0.035 7.7E-07 53.6 18.6 140 93-237 251-398 (432)
203 COG2814 AraJ Arabinose efflux 97.2 0.019 4.1E-07 54.5 16.2 155 124-311 35-189 (394)
204 TIGR00788 fbt folate/biopterin 97.2 0.017 3.7E-07 56.5 16.2 145 106-254 31-181 (468)
205 PF06609 TRI12: Fungal trichot 97.2 0.026 5.7E-07 56.6 17.1 98 125-227 67-164 (599)
206 PRK15075 citrate-proton sympor 97.1 0.011 2.4E-07 56.9 14.1 139 106-248 20-170 (434)
207 TIGR00898 2A0119 cation transp 97.0 0.0021 4.5E-08 63.1 8.2 85 140-227 130-214 (505)
208 TIGR00806 rfc RFC reduced fola 97.0 0.014 3.1E-07 56.7 13.1 126 122-253 46-172 (511)
209 KOG0252 Inorganic phosphate tr 97.0 0.0031 6.8E-08 60.4 8.4 146 139-300 86-238 (538)
210 KOG0254 Predicted transporter 97.0 0.0047 1E-07 61.0 9.8 103 140-247 92-194 (513)
211 KOG3764 Vesicular amine transp 96.9 0.0061 1.3E-07 57.5 9.3 88 138-228 107-194 (464)
212 PF12832 MFS_1_like: MFS_1 lik 96.9 0.0082 1.8E-07 43.4 8.0 65 105-170 4-68 (77)
213 KOG1330 Sugar transporter/spin 96.9 0.001 2.2E-08 63.7 3.9 78 53-130 187-273 (493)
214 KOG3098 Uncharacterized conser 96.8 0.12 2.7E-06 50.1 18.1 154 89-246 225-403 (461)
215 PF03825 Nuc_H_symport: Nucleo 96.7 0.044 9.5E-07 52.5 14.0 116 105-223 6-121 (400)
216 COG2270 Permeases of the major 96.7 0.015 3.2E-07 55.3 10.1 107 120-226 34-148 (438)
217 KOG0569 Permease of the major 96.6 0.029 6.3E-07 54.8 12.0 101 140-243 63-164 (485)
218 PF03219 TLC: TLC ATP/ADP tran 96.6 0.4 8.8E-06 47.1 19.7 79 87-165 266-347 (491)
219 KOG2532 Permease of the major 96.4 0.01 2.2E-07 57.9 7.9 152 140-321 76-227 (466)
220 PF00083 Sugar_tr: Sugar (and 96.4 4.4E-06 9.6E-11 80.6 -15.8 95 149-246 298-400 (451)
221 COG0738 FucP Fucose permease [ 96.2 0.042 9.2E-07 52.0 10.3 140 111-253 22-162 (422)
222 PF01770 Folate_carrier: Reduc 96.2 1.2 2.6E-05 42.7 23.3 156 91-249 237-394 (412)
223 PF07672 MFS_Mycoplasma: Mycop 96.1 0.041 8.9E-07 49.1 8.8 95 10-109 2-102 (267)
224 TIGR00769 AAA ADP/ATP carrier 95.9 0.87 1.9E-05 44.6 18.1 79 87-165 250-331 (472)
225 KOG3626 Organic anion transpor 95.9 0.13 2.9E-06 52.4 12.7 75 90-164 381-456 (735)
226 KOG0255 Synaptic vesicle trans 95.8 0.032 6.9E-07 55.1 7.8 85 141-228 122-206 (521)
227 PF00083 Sugar_tr: Sugar (and 95.7 0.00027 6E-09 68.1 -6.9 98 140-240 49-147 (451)
228 KOG2533 Permease of the major 95.6 0.2 4.4E-06 49.3 12.6 151 138-315 82-232 (495)
229 PF05978 UNC-93: Ion channel r 95.6 0.59 1.3E-05 38.6 13.5 101 146-252 46-146 (156)
230 PF03092 BT1: BT1 family; Int 95.6 0.22 4.8E-06 48.2 12.7 133 120-253 8-146 (433)
231 KOG3810 Micronutrient transpor 95.3 2.6 5.7E-05 39.5 21.6 153 91-249 224-380 (433)
232 KOG2615 Permease of the major 95.2 0.54 1.2E-05 44.5 13.2 65 193-259 352-416 (451)
233 TIGR00926 2A1704 Peptide:H+ sy 95.2 0.12 2.7E-06 52.6 9.8 133 120-254 6-147 (654)
234 KOG3762 Predicted transporter 95.1 0.63 1.4E-05 45.9 13.8 136 90-229 360-495 (618)
235 KOG0254 Predicted transporter 95.0 0.48 1E-05 46.8 13.3 80 147-227 339-429 (513)
236 COG2807 CynX Cyanate permease 94.9 0.64 1.4E-05 43.7 12.7 115 128-250 38-153 (395)
237 KOG0255 Synaptic vesicle trans 94.6 3.7 8.1E-05 40.4 18.5 91 158-251 371-462 (521)
238 KOG0253 Synaptic vesicle trans 94.6 0.32 6.9E-06 45.9 9.8 136 145-316 389-524 (528)
239 KOG2615 Permease of the major 94.4 0.2 4.3E-06 47.3 8.0 104 143-253 74-178 (451)
240 PF05631 DUF791: Protein of un 94.2 2.1 4.5E-05 40.1 14.5 99 108-211 41-139 (354)
241 PF06813 Nodulin-like: Nodulin 94.0 2.2 4.8E-05 38.1 13.8 118 127-254 27-150 (250)
242 KOG2325 Predicted transporter/ 93.9 0.42 9.1E-06 46.7 9.6 90 136-227 70-165 (488)
243 PF03137 OATP: Organic Anion T 93.9 0.017 3.6E-07 57.6 0.0 75 90-164 294-369 (539)
244 COG2223 NarK Nitrate/nitrite t 92.9 0.56 1.2E-05 44.7 8.6 101 108-210 21-122 (417)
245 PF03209 PUCC: PUCC protein; 91.6 1.3 2.8E-05 42.2 9.2 83 200-309 96-178 (403)
246 KOG2325 Predicted transporter/ 91.3 5.9 0.00013 38.9 13.6 72 8-80 159-234 (488)
247 KOG3762 Predicted transporter 90.8 0.15 3.2E-06 50.1 2.2 75 118-193 28-102 (618)
248 PF02487 CLN3: CLN3 protein; 90.3 2.9 6.2E-05 40.0 10.4 58 192-251 334-391 (402)
249 KOG2504 Monocarboxylate transp 88.9 2 4.4E-05 42.5 8.5 90 127-219 71-161 (509)
250 COG3104 PTR2 Dipeptide/tripept 88.6 8.6 0.00019 37.7 12.2 58 193-252 394-451 (498)
251 COG0477 ProP Permeases of the 88.2 11 0.00024 32.4 12.3 83 141-224 43-125 (338)
252 PF00854 PTR2: POT family; In 87.8 0.97 2.1E-05 42.6 5.3 108 171-308 4-120 (372)
253 KOG0637 Sucrose transporter an 86.5 7 0.00015 38.0 10.1 122 100-224 278-416 (498)
254 KOG2563 Permease of the major 83.3 25 0.00054 34.3 12.2 112 139-254 81-199 (480)
255 PTZ00207 hypothetical protein; 81.1 56 0.0012 33.1 14.6 57 194-253 453-510 (591)
256 COG3202 ATP/ADP translocase [E 80.4 63 0.0014 31.9 17.7 34 87-120 268-301 (509)
257 PRK03612 spermidine synthase; 79.5 54 0.0012 32.6 13.8 50 112-161 25-74 (521)
258 KOG0252 Inorganic phosphate tr 79.0 2.7 5.8E-05 40.9 4.2 130 157-314 368-501 (538)
259 TIGR01272 gluP glucose/galacto 77.7 4.4 9.6E-05 37.2 5.2 61 193-255 10-70 (310)
260 KOG0637 Sucrose transporter an 77.4 5.3 0.00012 38.8 5.7 141 104-246 35-194 (498)
261 TIGR00939 2a57 Equilibrative N 76.9 60 0.0013 31.5 13.0 55 194-250 373-427 (437)
262 TIGR00880 2_A_01_02 Multidrug 74.1 8.9 0.00019 29.2 5.5 60 8-77 81-140 (141)
263 KOG2816 Predicted transporter 70.9 14 0.0003 36.2 7.0 124 99-228 19-147 (463)
264 KOG3574 Acetyl-CoA transporter 69.2 1.1E+02 0.0024 29.5 12.1 128 9-140 164-303 (510)
265 KOG0253 Synaptic vesicle trans 67.6 59 0.0013 31.3 9.9 103 138-247 114-216 (528)
266 PF04018 DUF368: Domain of unk 67.0 96 0.0021 27.8 12.0 14 92-105 43-56 (257)
267 TIGR00926 2A1704 Peptide:H+ sy 65.1 1.7E+02 0.0037 30.1 17.3 56 12-70 122-177 (654)
268 PF03137 OATP: Organic Anion T 64.4 1.9 4.2E-05 43.0 -0.4 50 196-247 144-193 (539)
269 KOG1479 Nucleoside transporter 62.2 1.3E+02 0.0028 29.0 11.3 19 290-308 183-201 (406)
270 PF06779 DUF1228: Protein of u 53.1 59 0.0013 23.8 5.9 53 128-181 18-70 (85)
271 KOG1479 Nucleoside transporter 48.2 87 0.0019 30.1 7.8 53 193-248 343-396 (406)
272 KOG3574 Acetyl-CoA transporter 47.7 2.7E+02 0.0059 27.0 10.7 26 103-129 33-58 (510)
273 KOG3097 Predicted membrane pro 42.8 2.2E+02 0.0049 26.8 9.2 221 76-319 7-255 (390)
274 PF01733 Nucleoside_tran: Nucl 41.0 11 0.00025 34.5 0.7 52 195-248 250-301 (309)
275 PF05631 DUF791: Protein of un 39.5 3.3E+02 0.0072 25.7 12.4 69 89-161 232-302 (354)
276 KOG3626 Organic anion transpor 36.5 57 0.0012 33.8 4.9 90 94-184 89-178 (735)
277 PF15086 UPF0542: Uncharacteri 32.9 1.2E+02 0.0027 21.4 4.6 41 124-164 8-48 (74)
278 COG4975 GlcU Putative glucose 32.7 28 0.0006 31.0 1.7 19 57-75 116-134 (288)
279 TIGR00769 AAA ADP/ATP carrier 32.7 4.9E+02 0.011 25.6 11.8 40 211-254 147-188 (472)
280 TIGR00939 2a57 Equilibrative N 28.8 1.8E+02 0.0038 28.3 6.7 22 145-166 53-74 (437)
281 PF13073 DUF3937: Protein of u 26.6 1.4E+02 0.0031 20.4 3.9 38 97-134 1-38 (73)
282 PF00854 PTR2: POT family; In 25.9 81 0.0017 29.5 3.8 25 9-33 67-91 (372)
283 PF09877 DUF2104: Predicted me 25.4 3E+02 0.0065 20.7 7.0 34 172-205 38-71 (99)
284 PF06800 Sugar_transport: Suga 25.0 5.2E+02 0.011 23.4 9.8 41 145-185 170-212 (269)
285 PF12911 OppC_N: N-terminal TM 24.8 1.1E+02 0.0024 19.8 3.3 19 89-107 4-22 (56)
286 PF05653 Mg_trans_NIPA: Magnes 24.6 2.2E+02 0.0047 26.1 6.2 24 93-116 43-66 (300)
287 COG1916 Uncharacterized homolo 24.1 1.5E+02 0.0032 28.0 4.9 38 93-131 349-386 (388)
288 PF10639 UPF0546: Uncharacteri 22.3 3.8E+02 0.0081 20.8 6.8 17 90-106 31-47 (113)
289 TIGR02484 CitB CitB domain pro 20.9 7.3E+02 0.016 23.6 15.6 42 180-222 305-346 (372)
290 COG0679 Predicted permeases [G 20.2 2.6E+02 0.0057 25.6 5.9 22 89-110 157-178 (311)
No 1
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-54 Score=406.57 Aligned_cols=309 Identities=18% Similarity=0.159 Sum_probs=272.8
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 80 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~ 80 (326)
|.||||+||+||++++++|+.++.+|++++..+.+++...+++ +|.+.||+.+++++++++++..++|++.+|||+.
T Consensus 136 l~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~---~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~ 212 (467)
T COG2211 136 LGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGG---GDKALGYQGTALVLGVIGVILLLFCFFNVKERVV 212 (467)
T ss_pred cchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 6799999999999999999999999999998888888887763 3436899999999999999999999999999986
Q ss_pred ccC-CC--CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHH
Q 020432 81 KMG-LR--GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILL 157 (326)
Q Consensus 81 ~~~-~~--~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~ 157 (326)
++. .+ .+.+.++++..++|||||+.+++.+++...+.+..++...||++|++|+++..............+++.+++
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~ 292 (467)
T COG2211 213 ETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILW 292 (467)
T ss_pred ccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhH
Confidence 433 22 345677788899999999999999999999999999999999999999855444455556666677778999
Q ss_pred HHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-----CCCCceEE
Q 020432 158 QEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE-----DLSGCAFV 232 (326)
Q Consensus 158 ~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-----~~r~~g~i 232 (326)
|++.||+|| |+++..+.++++++.+.+++.++++...+++..++.++|.+..+.++|+|+||++|| |+|+||++
T Consensus 293 p~L~~~~gk-k~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~ 371 (467)
T COG2211 293 PRLVKKFGK-KKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIV 371 (467)
T ss_pred HHHHHHhch-HHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhH
Confidence 999999995 778999998989999999999977778888888999999999999999999999998 56999999
Q ss_pred EehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccC
Q 020432 233 CGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKL 312 (326)
Q Consensus 233 ~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l 312 (326)
||.++|..|+|.++++.+.|+.++..||+||.. +|+++++++|+.++.++|+++.+++++++.+||+
T Consensus 372 ~s~~tF~~K~g~ala~~~~g~~L~~~Gyv~~~~-------------~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~L 438 (467)
T COG2211 372 YSGMTFFRKLGLALAGFIPGWILGAIGYVPNVS-------------AQSASALFGIRFLFIILPALLLLLAAIIIFFYKL 438 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcc-------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999998651 2344558999999999999999999999999999
Q ss_pred CCCCCccccccccC
Q 020432 313 HTPYSKPLVEPLLQ 326 (326)
Q Consensus 313 ~~~~~~~i~~~~~~ 326 (326)
|||+|++|+|||.|
T Consensus 439 ~~~~~~~I~~eL~~ 452 (467)
T COG2211 439 NEKMHKEIIEELEQ 452 (467)
T ss_pred CHHHHHHHHHHHHH
Confidence 99999999999865
No 2
>PRK11462 putative transporter; Provisional
Probab=100.00 E-value=1.3e-42 Score=336.89 Aligned_cols=305 Identities=15% Similarity=0.136 Sum_probs=243.8
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 80 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~ 80 (326)
|.+|||+|+|||++++++|++++.+|.++...+..+++...|. ++...||+..+.+++++++++.++|+..+|||++
T Consensus 133 l~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~---~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~ 209 (460)
T PRK11462 133 LGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGG---DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVE 209 (460)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccC
Confidence 5689999999999999999999999988877776666665542 2334699999999999999999999999999865
Q ss_pred ccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHH
Q 020432 81 KMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM 160 (326)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l 160 (326)
++ +++.+.++.++..++||+|+.++..+++..+.....++...||++|+++.++ ..+.+.....+..+++.++++++
T Consensus 210 ~~--~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~-~~~~~l~~~~i~~iig~~l~~~l 286 (460)
T PRK11462 210 AP--PTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPE-VFVAFLTTYCVGNLIGSALAKPL 286 (460)
T ss_pred CC--ccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2345678899999999999998888888999989999999999999998643 33455556677888899999999
Q ss_pred HHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-----CCCceEEEeh
Q 020432 161 AWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-----LSGCAFVCGT 235 (326)
Q Consensus 161 ~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-----~r~~g~i~s~ 235 (326)
.||++| |+.+..+..+..+..+.+++.+..+....++..++.|++.+....++|+|++|++||| +|+||+++|.
T Consensus 287 ~~r~gk-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~ 365 (460)
T PRK11462 287 TDWKCK-VTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAG 365 (460)
T ss_pred HHHhCh-HHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHH
Confidence 999886 5554444433333344445555444444455556678888888899999999999974 7889999999
Q ss_pred hHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHH-hhccCCC
Q 020432 236 LSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVT-FTMKLHT 314 (326)
Q Consensus 236 ~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~-~~y~l~~ 314 (326)
++|.+|+|++++.++.|.+++..||+++. + +|++ +++.+++++++++|+++.+++++++ ++|||||
T Consensus 366 ~~f~~Klg~alg~~i~g~iL~~~Gy~~~~-~-------~q~~-----~~~~~i~~~~~~~P~~~~~~~~~~~~~~y~l~~ 432 (460)
T PRK11462 366 TLFVLKLGLAFGGALIGWMLAYGGYDAAE-K-------AQNS-----ATISIIIALFTIVPAICYLLSAIIAKRYYSLTT 432 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCC-C-------CCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCH
Confidence 99999999999999999999989997632 1 1222 3379999999999999999998887 5799999
Q ss_pred CCCcccccccc
Q 020432 315 PYSKPLVEPLL 325 (326)
Q Consensus 315 ~~~~~i~~~~~ 325 (326)
|+|+||++||.
T Consensus 433 ~~~~~i~~~l~ 443 (460)
T PRK11462 433 HNLKTVMEQLA 443 (460)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 3
>PRK09669 putative symporter YagG; Provisional
Probab=100.00 E-value=2.3e-41 Score=326.86 Aligned_cols=307 Identities=16% Similarity=0.113 Sum_probs=247.9
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 80 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~ 80 (326)
+.+|||+|++||++++++|+.++.+|+.+...+..++...++. ++...||+..+++++++++++.++|++.+|||..
T Consensus 133 l~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~---~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~ 209 (444)
T PRK09669 133 MPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK---GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYT 209 (444)
T ss_pred hHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecC
Confidence 4689999999999999999999999988877666555555442 2335799999999999999998899999999865
Q ss_pred ccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHH
Q 020432 81 KMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM 160 (326)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l 160 (326)
+++ +++.+.+++++.++|||+|+.+++.+++........++..+||++|+++.+ +....+.....+..+++.++++++
T Consensus 210 ~~~-~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~i~~ii~~~~~~~l 287 (444)
T PRK09669 210 PEV-DNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRP-DLATLFLVTGMIAGLFGALLSERL 287 (444)
T ss_pred CCC-cCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 432 334567788999999999999888888888888888888999999998863 333344445567778888899999
Q ss_pred HHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-----CCCCceEEEeh
Q 020432 161 AWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE-----DLSGCAFVCGT 235 (326)
Q Consensus 161 ~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-----~~r~~g~i~s~ 235 (326)
.||+|| |+.+..+..+.++..+.+++.++++.+..++..++.|+|.+..++..|+|++|++|| ++|+||+++|.
T Consensus 288 ~~r~gk-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~ 366 (444)
T PRK09669 288 LGKFDR-VRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFST 366 (444)
T ss_pred HHHhCh-HHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHH
Confidence 999986 556666665444444445555556666667777889999999999999999999986 45778999999
Q ss_pred hHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccCCCC
Q 020432 236 LSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTP 315 (326)
Q Consensus 236 ~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l~~~ 315 (326)
++|.+|+|+++|..+.|.+++..||+++. . .|+++++++|+++++++|+++.+++++++++||+|||
T Consensus 367 ~~~~~klg~alg~~i~g~ll~~~Gy~~~~--------~-----~q~~~~~~~i~~~~~~~p~~~~~~~~~~~~~y~l~~~ 433 (444)
T PRK09669 367 NLFAIKLGLAIGGAVVGWILAWVDYVGGA--------A-----VQSASVLTTINLLFTVIPGVLFAGMAIILNFYKLNDA 433 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCC--------C-----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHH
Confidence 99999999999999999999999997632 1 1223447999999999999999999999999999999
Q ss_pred CCccccccccC
Q 020432 316 YSKPLVEPLLQ 326 (326)
Q Consensus 316 ~~~~i~~~~~~ 326 (326)
+|+||++||.+
T Consensus 434 ~~~~i~~~l~~ 444 (444)
T PRK09669 434 RVEAIAQELVK 444 (444)
T ss_pred HHHHHHHHHhC
Confidence 99999999853
No 4
>PF13347 MFS_2: MFS/sugar transport protein
Probab=100.00 E-value=3.5e-41 Score=324.09 Aligned_cols=296 Identities=20% Similarity=0.229 Sum_probs=254.7
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCC-
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR- 79 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~- 79 (326)
|.+|+|+|+|||++++++|+.++.+|+++...+.+.+...++. ++..+||++++.++++++.++.+++++.+||+.
T Consensus 127 l~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~---~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~ 203 (428)
T PF13347_consen 127 LIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG---GDTSNGYRWMALVLAIVGLVFFLITFFFVKERSV 203 (428)
T ss_pred cCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---CccchHHHHHHHHHHHHHHHHhhhhhheeeeccc
Confidence 5799999999999999999999999998777777766665542 222249999999999999999999999999943
Q ss_pred cccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHH
Q 020432 80 LKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQE 159 (326)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~ 159 (326)
..++++++.+.++.+|.++|||+++++.+.+++.+......++..+||++|+++++ +..+.+.....++++++++++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~ 282 (428)
T PF13347_consen 204 EVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGR 282 (428)
T ss_pred cccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHH
Confidence 22333455678899999999999999999999999999999999999999999985 45566667788889999999999
Q ss_pred HHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-----CCCceEEEe
Q 020432 160 MAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-----LSGCAFVCG 234 (326)
Q Consensus 160 l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-----~r~~g~i~s 234 (326)
+.||+|| |+.+..+.++.+++.+.+++.++++.+.+++..++.|+|.+..+..+++|++|++|++ +|++|+++|
T Consensus 283 l~~r~gk-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s 361 (428)
T PF13347_consen 283 LSKRFGK-KKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFS 361 (428)
T ss_pred HHHHccc-eeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHH
Confidence 9999996 5578888888777777777776567788889999999999999999999999999974 578999999
Q ss_pred hhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccCCC
Q 020432 235 TLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHT 314 (326)
Q Consensus 235 ~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l~~ 314 (326)
.++|.+|+++++++.+.+.+++..||+++.. .|+++++++++.+++++|+++.+++++++++||+||
T Consensus 362 ~~~~~~k~~~~la~~i~g~~l~~~Gy~~~~~-------------~q~~~~~~~i~~~~~~~p~~~~~~~~i~~~~y~l~~ 428 (428)
T PF13347_consen 362 VNSFFIKIGQGLAGAIVGLLLALVGYDANAA-------------VQSASALSGIRILFSIVPAIFLLLAIIFMRFYPLTR 428 (428)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHhCcCCCcC-------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 9999999999999999999999999987441 233445899999999999999999999999999987
No 5
>PRK10429 melibiose:sodium symporter; Provisional
Probab=100.00 E-value=2.5e-41 Score=329.27 Aligned_cols=306 Identities=12% Similarity=0.107 Sum_probs=244.1
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 80 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~ 80 (326)
|.+|||+|++||++++++|+.++.+|++++..+..+++..+|. .+...||+.++.+++++++++.++|++++|||..
T Consensus 130 l~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~---~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~ 206 (473)
T PRK10429 130 LVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGG---GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS 206 (473)
T ss_pred hhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC
Confidence 4689999999999999999999999987776655555454442 2334689999999999999999999999999853
Q ss_pred cc----CCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHH
Q 020432 81 KM----GLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSIL 156 (326)
Q Consensus 81 ~~----~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~ 156 (326)
++ .++++.+.++.++.+++||+++.+++.+++.+......+++.+||++|+++. ++..+.+.....++.+++.++
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~-~~~~~~~~~~~~i~~ii~~~~ 285 (473)
T PRK10429 207 SDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIGD-ADLFPYYLSYAGAANLVTLIL 285 (473)
T ss_pred ccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCC-HHHHHHHHHHHHHHHHHHHHH
Confidence 22 1223456788899999999999999888888888888889999999998875 333344444555778888899
Q ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHhh---cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-----CCC
Q 020432 157 LQEMAWTGQRLKAYYSAGGVLWVFCGAGILI---LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-----LSG 228 (326)
Q Consensus 157 ~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~---~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-----~r~ 228 (326)
++++.||+|| |+.+..+..+.+++.+.+++ .++++.+..++..++.|++.+..+...++|++|++||| +|+
T Consensus 286 ~~~l~~r~gk-k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~ 364 (473)
T PRK10429 286 FPRLVKSLSR-RILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRC 364 (473)
T ss_pred HHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccc
Confidence 9999999996 55666666554444443332 34455556666677888999999999999999999974 688
Q ss_pred ceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHH-
Q 020432 229 CAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVT- 307 (326)
Q Consensus 229 ~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~- 307 (326)
+|+++|.++|.+|++++++..+.|++++..||++++ .|+++++++++++++++|+++.+++++++
T Consensus 365 ~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy~~~~--------------~q~~~~~~~i~~~~~~~p~~~~~~~~~~~~ 430 (473)
T PRK10429 365 ESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGYVPNV--------------EQSAQTLLGMQFIMIGLPTLFFMITLVLYF 430 (473)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997643 12234479999999999999999998876
Q ss_pred hhccCCCCCCcccccccc
Q 020432 308 FTMKLHTPYSKPLVEPLL 325 (326)
Q Consensus 308 ~~y~l~~~~~~~i~~~~~ 325 (326)
++||||||+|++|++||.
T Consensus 431 ~~y~l~~~~~~~i~~~l~ 448 (473)
T PRK10429 431 RYYRLNGDFLRRIQIHLL 448 (473)
T ss_pred HheeCCHHHHHHHHHHHH
Confidence 699999999999999974
No 6
>PRK09848 glucuronide transporter; Provisional
Probab=100.00 E-value=7e-36 Score=288.84 Aligned_cols=304 Identities=14% Similarity=0.105 Sum_probs=234.7
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHH-HHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCC
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLY-AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 79 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~ 79 (326)
|.++||+|++||++++++|+.++.++..... .+.+.+....+ ++...+|....++++++++++.++++..+||+.
T Consensus 133 l~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~ 208 (448)
T PRK09848 133 LATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSP----EEMVSVYHFWTIVLAIAGMVLYFICFKSTRENV 208 (448)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CchhhhHHHHHHHHHHHHHHHHHHHHcCcEecc
Confidence 3578999999999999999988877655443 34444444322 222346766667788888888888888899986
Q ss_pred cccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHH
Q 020432 80 LKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQE 159 (326)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~ 159 (326)
.++. ++.+.++.++.++|||+++...+..++............+||+++++|.++...........+..+++.+++++
T Consensus 209 ~~~~--~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 286 (448)
T PRK09848 209 VRIV--AQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPG 286 (448)
T ss_pred CCCc--cCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5432 23456778999999999998888888888887888888999999998875432222222334566778888999
Q ss_pred HHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-----CCCceEEEe
Q 020432 160 MAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-----LSGCAFVCG 234 (326)
Q Consensus 160 l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-----~r~~g~i~s 234 (326)
+.||+++ |+.+..+..+..++.+.+.+.+..+.+..++...+.|+|.+..++..+++.+|++|+| +|++|..+|
T Consensus 287 l~~r~g~-~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~ 365 (448)
T PRK09848 287 MVARIGK-KNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYS 365 (448)
T ss_pred HHHHhCc-HHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHH
Confidence 9988885 6667777766666655555544344555556667789999999999999999999975 477899999
Q ss_pred hhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccCCC
Q 020432 235 TLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHT 314 (326)
Q Consensus 235 ~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l~~ 314 (326)
.+++.+|+|.++|..+.+.+++..||++++ .|++++++++|..++++|+++.+++++++++||+||
T Consensus 366 ~~~~~~klg~aig~~i~g~~l~~~G~~~~~--------------~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~y~l~~ 431 (448)
T PRK09848 366 LFSFTRKCGQAIGGSIPAFILGLSGYIANQ--------------VQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTD 431 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeCCH
Confidence 999999999999999999998889997643 122233799999999999999999999999999999
Q ss_pred CCCcccccccc
Q 020432 315 PYSKPLVEPLL 325 (326)
Q Consensus 315 ~~~~~i~~~~~ 325 (326)
|+|+|+++||.
T Consensus 432 ~~~~~~~~~l~ 442 (448)
T PRK09848 432 KKFKEIVVEID 442 (448)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 7
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=100.00 E-value=3.1e-35 Score=282.42 Aligned_cols=306 Identities=17% Similarity=0.175 Sum_probs=240.5
Q ss_pred CcccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432 1 MVNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 80 (326)
Q Consensus 1 l~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~ 80 (326)
+.+|+|+|++||++++++|+.+..+|+++...+..++....+. ++...||++...+.+++++++.+++++.+||+++
T Consensus 123 l~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~---~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~ 199 (437)
T TIGR00792 123 LVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG---GDDKFGWFMFALVLALIGVVSLIICFFGTKERYS 199 (437)
T ss_pred CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCC
Confidence 4579999999999999999999999988876665555544432 1224699999999999999988888888999763
Q ss_pred ccCC--CCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHH
Q 020432 81 KMGL--RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQ 158 (326)
Q Consensus 81 ~~~~--~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~ 158 (326)
+.++ +++.+.++.+|.+++||+++...+.+++.+........+.++|.+++++. +...+.+.....++.+++.++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ii~~~~~~ 278 (437)
T TIGR00792 200 EIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGD-PELFSYMGSIAIVAGLIGVLLFP 278 (437)
T ss_pred CCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 3111 23345678899999999999888888888888887777888998888774 33344455556778889999999
Q ss_pred HHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-----CCCceEEE
Q 020432 159 EMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-----LSGCAFVC 233 (326)
Q Consensus 159 ~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-----~r~~g~i~ 233 (326)
++.||+|| |+.+..+..+.+++...+.+.+ ++.+...+..++.|++.+..+...+++++|++|+| +|++|..+
T Consensus 279 ~l~~r~g~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 356 (437)
T TIGR00792 279 RLVKKFGR-KILFAGGILLMVLGYLIFFFAG-SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVY 356 (437)
T ss_pred HHHHHhCc-HHHHHHHHHHHHHHHHHHHHcc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHH
Confidence 99999985 5667777666555554444443 44455556667788999999999999999999864 56789999
Q ss_pred ehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHh-hccC
Q 020432 234 GTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTF-TMKL 312 (326)
Q Consensus 234 s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~-~y~l 312 (326)
|.+++..|++.+++..+.|.+++..||.++. .|+++++++++..+.++|+++.++++++++ +||+
T Consensus 357 ~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~--------------~~~~~~~~~~~~~~~~~p~i~~~~~~~~~~~~y~l 422 (437)
T TIGR00792 357 SVRTFVRKLGQALAGFLVGLILGIIGYVANA--------------AQSPITLNGIKILMFAVPALFLLLAAIIIGRFYKL 422 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCcCC--------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHeeC
Confidence 9999999999999999999998888996532 122233789999999999999999999997 9999
Q ss_pred CCCCCccccccccC
Q 020432 313 HTPYSKPLVEPLLQ 326 (326)
Q Consensus 313 ~~~~~~~i~~~~~~ 326 (326)
|||+|+||+++|.+
T Consensus 423 ~~~~~~~i~~~l~~ 436 (437)
T TIGR00792 423 TEKKHAEIVEELEQ 436 (437)
T ss_pred cHHHHHHHHHHHhc
Confidence 99999999998753
No 8
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=1.1e-19 Score=176.65 Aligned_cols=240 Identities=10% Similarity=0.010 Sum_probs=168.8
Q ss_pred HHHHHHHHHhhhheeeecCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 020432 59 SSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSA 138 (326)
Q Consensus 59 i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~ 138 (326)
+.+.+......++++..||+..+ ++.. ++ .++|||+++..++..++.+........+.|+|++++.|+++..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 298 (471)
T PRK10504 227 IAGLVAVGVVALLLYLLHARNNN---RALF----SL-KLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFH 298 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC---CCcc----CH-HHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 34444444455566667776432 1111 22 3789999998888888888877777889999999999886544
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcc-hhHHHHHHHHHhhHHHHHHHHHHHH
Q 020432 139 KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNM-SAFMYVLAIFVGIANALMMVTGISM 217 (326)
Q Consensus 139 ~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~-~~~~l~~~~~~g~g~~~~~~~~~am 217 (326)
.+.......++.+++.++++++.+|++| |+.+..+..+..+...++.+.+..+ .....+..++.|++.+..+...+++
T Consensus 299 ~g~~~~~~~~~~~~~~~~~~~l~~r~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 377 (471)
T PRK10504 299 AGLMMIPMVLGSMGMKRIVVQVVNRFGY-RRVLVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTL 377 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCc-hHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445556667777888999999885 5566666655455544444443222 2333344556677777777777888
Q ss_pred hHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHh-
Q 020432 218 QNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIP- 296 (326)
Q Consensus 218 ~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP- 296 (326)
.+|.++++.| |..+|.+++.+|+|.++|..+.|.+++..+|.+.+ + ++. ...+.+.+.++|
T Consensus 378 ~~~~~~~~~~--g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~~~~--~---------~~~-----~~~~~~~~~~~~~ 439 (471)
T PRK10504 378 TLKDLPDNLA--SSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQHVS--V---------DSG-----ATHTVFMYTYLCM 439 (471)
T ss_pred HHHcCCHHhc--cchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc--c---------ccc-----cchhHHHHHHHHH
Confidence 8888776555 77799999999999999999999888888884311 1 112 366778888899
Q ss_pred HHHHHHHHHHHhhccCCCCCCcccccccc
Q 020432 297 AICSLVSVAVTFTMKLHTPYSKPLVEPLL 325 (326)
Q Consensus 297 ~~~~l~~~i~~~~y~l~~~~~~~i~~~~~ 325 (326)
+++.+++++++.+||++|++++++++++.
T Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (471)
T PRK10504 440 ALIIALPALIFARVPNDTHQNVAISRRKR 468 (471)
T ss_pred HHHHHHHHHHHhcCCcchhhhhccccccc
Confidence 77888888888899999999998888774
No 9
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.83 E-value=2.3e-20 Score=162.01 Aligned_cols=253 Identities=39% Similarity=0.678 Sum_probs=196.1
Q ss_pred cchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 47 ADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAF 126 (326)
Q Consensus 47 ~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (326)
.+...-|++.+...-.+++....+...+|||+...-+.++.+..+-.|..+|++-.|+.+..+|+++.+..+..++|+++
T Consensus 147 e~tea~~R~~~~~~v~lG~~~~~vF~~~TrEP~~~~~~~~s~~~Rm~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaF 226 (412)
T KOG4830|consen 147 ESTEALIRLAGWLVVVLGITVAFVFYAFTREPTNSFSSDASELVRMHWTSWFGHVQFYQIALLYMLSRLYINISQAYLAF 226 (412)
T ss_pred ccHHHHHHHhhhheeeeceeEEEEEeecccCcccccCcchhhhhcccchhhhhhhHHHHHHHHHHHHHHHhhhhhhheee
Confidence 34345788887777777777777778899998754444444556778999999999999999999999999999999999
Q ss_pred HHHHHhcCCcccchhhhHHHHHHHHHHHHHHHH--HHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHh
Q 020432 127 YVINDLRMGQSAKALVPAIIYICSFIVSILLQE--MAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVG 204 (326)
Q Consensus 127 Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~--l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g 204 (326)
|+.+.++..++..+++|.+..++++..+.+-.. ..+| |+|..|..|+++|..++..++++|++-..-.+.+.+++|
T Consensus 227 fviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngk--rlKayYsaGgiiwifcga~ilLlpr~i~symyAisvfIG 304 (412)
T KOG4830|consen 227 FVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGK--RLKAYYSAGGIIWIFCGAVILLLPRGIKSYMYAISVFIG 304 (412)
T ss_pred EEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcc--eeeeeeecccHHHHHhhhheeecccchHHHHHHHHHHHH
Confidence 999999987777889999999998887776543 3333 246778899999988888888888776667888899999
Q ss_pred hHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccc
Q 020432 205 IANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSY 284 (326)
Q Consensus 205 ~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~ 284 (326)
+..+..+....+|.+|.+..+.++++++++.+||.+|++.|++-.++..-....+-...+ .. - +-
T Consensus 305 IAnAimlvtslsitavli~~~~~~~aFv~GamSF~DKlS~GiA~~lie~~~~a~~~~k~~------~~------~---r~ 369 (412)
T KOG4830|consen 305 IANAIMLVTSLSITAVLINKNTESGAFVYGAMSFFDKLSNGIAYQLIELWTPAYDALKSA------IF------Y---RR 369 (412)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCceEEEehHHHHHhhcccHHHHHHHhcCCcchhhhhh------hh------h---eE
Confidence 999999999999999999999989999999999999999999998887643322211100 00 0 00
Q ss_pred cceeeeecchHhHHHHHHHHHHHhhccCCCCC
Q 020432 285 ISVTRFGLGLIPAICSLVSVAVTFTMKLHTPY 316 (326)
Q Consensus 285 ~~~i~~~~~~iP~~~~l~~~i~~~~y~l~~~~ 316 (326)
..-..-..+++|+.+.++++....+.++.+++
T Consensus 370 V~v~V~G~~LV~A~~~~l~lA~~~~~E~~~A~ 401 (412)
T KOG4830|consen 370 VMVFVPGTCLVLAFLVLLSLAPFKIGERRRAR 401 (412)
T ss_pred EEEEecchhHHHHHHHHHhhhhHhhhhhhhcC
Confidence 12223356788898888888887777666444
No 10
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.77 E-value=1.4e-16 Score=154.78 Aligned_cols=275 Identities=13% Similarity=0.106 Sum_probs=203.1
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCC-C---
Q 020432 12 RVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG-N--- 87 (326)
Q Consensus 12 R~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~-~--- 87 (326)
|.++|+.-...+++|+++..++...++...+.. .+.....+....+.|+.-++..+..++..|||+.++..++ +
T Consensus 186 ~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~--~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~ 263 (477)
T PF11700_consen 186 RGRVSGLGWALGYIGGLVALLISLLLVISPGST--ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYL 263 (477)
T ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc--cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHH
Confidence 599999999999999988877665554433321 1223467777777777777888888889999875322211 1
Q ss_pred ----cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 88 ----SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 88 ----~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
..+++.+|++.|+|+..+.++.+++..-+.+........|.+..+|.++..+..+.+...+.+++|+++++++.||
T Consensus 264 ~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r 343 (477)
T PF11700_consen 264 RFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDR 343 (477)
T ss_pred HHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1245567888899999888899999999999999999999999999987667777778889999999999999998
Q ss_pred cccc-hhhhhHhHHHHHHHHHHHhh------cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 164 GQRL-KAYYSAGGVLWVFCGAGILI------LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 164 ~gkk-k~~~~~~~~l~~~~~~~l~~------~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
+|.| |++...+++++.+..+.-++ ....+.+.+++.+++.|+..|..+..+-+|+++.++++++ +-.||.+
T Consensus 344 ~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e--~efFgly 421 (477)
T PF11700_consen 344 FGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGRE--AEFFGLY 421 (477)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchh--hHHHHHH
Confidence 8854 14555555554333222222 1234567889999999999999999999999999999887 5579999
Q ss_pred HHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccCCCCC
Q 020432 237 SFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKLHTPY 316 (326)
Q Consensus 237 sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l~~~~ 316 (326)
.+..|.+.-+|..+.|.+.+.. ..+|..+. .-+++++++++++++.|.+|.+
T Consensus 422 ~i~gk~ss~lGPll~g~i~~~t---------------------------g~~r~g~~-~l~~lf~~gl~ll~~v~~~~g~ 473 (477)
T PF11700_consen 422 AITGKASSWLGPLLFGLITDAT---------------------------GSQRYGFL-FLLVLFLIGLILLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---------------------------CCchhHHH-HHHHHHHHHHHHHhhccchhhh
Confidence 9999999999999998763222 12445442 3344566677777777776665
Q ss_pred Cc
Q 020432 317 SK 318 (326)
Q Consensus 317 ~~ 318 (326)
++
T Consensus 474 ~~ 475 (477)
T PF11700_consen 474 ED 475 (477)
T ss_pred hc
Confidence 54
No 11
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.65 E-value=1.4e-14 Score=134.66 Aligned_cols=239 Identities=13% Similarity=0.068 Sum_probs=157.2
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhh-eeeecCCCcc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIF-LSRTEEPRLK 81 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~-~~~tkE~~~~ 81 (326)
+++++ ++||.+.++++..+..+|.++...+...+.+. .||++...+.++..++..+.. ....+|+..+
T Consensus 118 ~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (365)
T TIGR00900 118 PDLVP-EEQLTQANSLSQAVRSLFYIVGPGIGGLMYAT----------LGIKWAIWVDAVGFAISALLIVSVRIPELAAS 186 (365)
T ss_pred HhcCC-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHHHHHHhcccccCCCc
Confidence 34443 45999999999999999887766555444332 355554444443333332222 1222332211
Q ss_pred cCCCCC----cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHH
Q 020432 82 MGLRGN----SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQ-AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSIL 156 (326)
Q Consensus 82 ~~~~~~----~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~ 156 (326)
+.++.+ .+.++.++..+|||.++......++......... .+.|+|.++.+|.++...+.+.....++.+++.++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (365)
T TIGR00900 187 EIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALL 266 (365)
T ss_pred cccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHH
Confidence 111101 1234567888999999887766666666555554 78899999888876555566666667788888888
Q ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 157 LQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 157 ~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
.+++.||.+| |+....+..+..++...+.+.++ +.+..++..++.|++.+...+..+++++|.+|++.| |...|..
T Consensus 267 ~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~ 342 (365)
T TIGR00900 267 LGLLGRYFKR-MALMTGAIFVIGLAILVVGLTPP-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELL--GRVFGAQ 342 (365)
T ss_pred HHHHHHHhch-hHHHHHHHHHHHHHHHHHHhhch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHH
Confidence 9999888875 55555554443444333333332 355566677788999988889999999999998776 6678999
Q ss_pred HHHHHHHhhHHHHhhhhccc
Q 020432 237 SFLDKMSCGIAVYVLQSYQS 256 (326)
Q Consensus 237 sf~~Kl~~~i~~~i~~~~l~ 256 (326)
+...+++..++..+.|.+.+
T Consensus 343 ~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 343 FSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888876643
No 12
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.64 E-value=6.3e-14 Score=132.95 Aligned_cols=231 Identities=12% Similarity=0.079 Sum_probs=139.8
Q ss_pred CCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCC
Q 020432 7 LNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG 86 (326)
Q Consensus 7 ~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~ 86 (326)
-+++||.+..+++.....++..+...+...+. + ..||++...+.+++..+..+++++..||++.++++ +
T Consensus 120 ~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~---------~-~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 188 (392)
T PRK10473 120 LDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM---------L-KFPWQSLFYTMAAMGILVLLLSLFILKETRPARAP-A 188 (392)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------h-CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcccC-C
Confidence 36789999999988777766554433332221 1 24787777777777776666666667886543211 2
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
+.+..+..+..++||+++...+...+..........+.++|+++.+|.++...+.......+..+++.++.+++.||++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~ 268 (392)
T PRK10473 189 ASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKP 268 (392)
T ss_pred ccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 22334566788899998776555554444444555667888888888765544555555667788888999999999885
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
|+.+..+..+..++...+.+.+. ....+....+.+.|.+...... +..+..+. .+++|..++..++.++++.++
T Consensus 269 -~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~-~~~~g~~~~~~~~~~~~g~~~ 342 (392)
T PRK10473 269 -RTLMLTSQVLFLAAGITLALSPS--HAVSLFGITLICAGFSVGFGVA--MSQALGPF-SLRAGVASSTLGIAQVCGSSL 342 (392)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhHHH--HHHHhccC-cccccHHHHHHHHHHHHHHHH
Confidence 55666666555444444443322 2222222233333333322222 22223333 334577777888888888888
Q ss_pred HHHhhhhc
Q 020432 247 AVYVLQSY 254 (326)
Q Consensus 247 ~~~i~~~~ 254 (326)
++.+.+..
T Consensus 343 ~~~l~~~~ 350 (392)
T PRK10473 343 WIWLAAVL 350 (392)
T ss_pred HHHHHHHh
Confidence 87777654
No 13
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.61 E-value=4.1e-14 Score=132.43 Aligned_cols=230 Identities=13% Similarity=0.078 Sum_probs=151.9
Q ss_pred cccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcc
Q 020432 2 VNCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK 81 (326)
Q Consensus 2 ~~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~ 81 (326)
.+|++ +++||.+.++++..+..+|.++...+...+....+.. .....||+....+.+++.++..+++++..||+.++
T Consensus 108 ~~~~~-~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~--~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~ 184 (356)
T TIGR00901 108 RLEIL-SDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN--TGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED 184 (356)
T ss_pred HHHhC-CHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc
Confidence 35667 5799999999999999999888776665555444321 11235798888777776666666665556775432
Q ss_pred cCCC--CCcchhhhHHHHhhchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHH-HHHHHHHHHH
Q 020432 82 MGLR--GNSHARISWAYWFKKIL---YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI-IYICSFIVSI 155 (326)
Q Consensus 82 ~~~~--~~~~~~~~l~~~~~N~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~-~~i~~~i~~~ 155 (326)
++++ ++.+.++.++.++|||. ++...+..++..........+.++|.++ .|.+++..+.+... ..+..+++.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~ 263 (356)
T TIGR00901 185 ASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGL 263 (356)
T ss_pred cccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHH
Confidence 2111 11234557888999986 6666666666777777788899999988 77765544443332 3356678888
Q ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcC-C--------cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC
Q 020432 156 LLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILP-M--------NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL 226 (326)
Q Consensus 156 ~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~-~--------~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~ 226 (326)
+.+++.+|.|+||. ...+.++..+....+.+.. . .+.+......++.+++.+..++...+++.+.+|+|.
T Consensus 264 ~~g~l~~r~g~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~ 342 (356)
T TIGR00901 264 IGGIIMQPLNILYA-LLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF 342 (356)
T ss_pred HHHHHHhhhhHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc
Confidence 99999988886444 4554544444433333322 1 122344445566788889999999999999999988
Q ss_pred CCceEEEehhHH
Q 020432 227 SGCAFVCGTLSF 238 (326)
Q Consensus 227 r~~g~i~s~~sf 238 (326)
| |..+|..+.
T Consensus 343 ~--g~~~g~~~~ 352 (356)
T TIGR00901 343 G--ATQMALLSS 352 (356)
T ss_pred c--HHHHHHHHH
Confidence 8 545565443
No 14
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.60 E-value=2.3e-13 Score=127.72 Aligned_cols=243 Identities=14% Similarity=0.048 Sum_probs=151.6
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc-CCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM-GLRG 86 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~-~~~~ 86 (326)
++++|.+..+.+..+..+|.++...+...+....+.. .....||++...+.+++.++..... ...+|++..+ ++++
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 202 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDD--ALLEWGWRIPFLVSAVLVLIGLYLR-RNLEETPVFEKAQEK 202 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HhhccchHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHhc
Confidence 4678999999999999888877666554443332211 0013578776555554444433322 2345543211 1111
Q ss_pred CcchhhhHHHHhhchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc
Q 020432 87 NSHARISWAYWFKKIL--YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~--~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~ 164 (326)
+.+.++++++.++|++ ++......++..........+.+.|++++.+.++...........+..+++.++.+++.+|.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~ 282 (394)
T TIGR00883 203 HKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI 282 (394)
T ss_pred cccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2223456777788876 66666666666777777788999999988887655445555556667788888899999888
Q ss_pred ccchhhhhHhHHHHHHHH-HHH-hhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh-hHHHHH
Q 020432 165 QRLKAYYSAGGVLWVFCG-AGI-LILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT-LSFLDK 241 (326)
Q Consensus 165 gkkk~~~~~~~~l~~~~~-~~l-~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~-~sf~~K 241 (326)
+| |+.+..+..+..+.. ..+ .+...++.+..+....+.|++.+......+++++|..+++.| |...+. +++...
T Consensus 283 g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~ 359 (394)
T TIGR00883 283 GR-RPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVR--YTGASLAYNLAGA 359 (394)
T ss_pred ch-HHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccce--eeEeeehhHhHHH
Confidence 86 444443333322222 222 222223444455556667787778888899999999998777 444565 566677
Q ss_pred HHhhHHHHhhhhccc
Q 020432 242 MSCGIAVYVLQSYQS 256 (326)
Q Consensus 242 l~~~i~~~i~~~~l~ 256 (326)
++.+++..+.|.+.+
T Consensus 360 ~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 360 IFGGFAPYIAAALVA 374 (394)
T ss_pred HHhhHHHHHHHHHHH
Confidence 787788877776643
No 15
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.56 E-value=5.6e-13 Score=124.69 Aligned_cols=239 Identities=10% Similarity=0.077 Sum_probs=152.3
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC---C
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG---L 84 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~---~ 84 (326)
+++||.+..+.......+|.++...+...+.. ..||++.-.+.+++.++..+...+..+|++.++. +
T Consensus 112 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (399)
T TIGR00893 112 PASERATAVSIFNSAQGLGGIIGGPLVGWILI----------HFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTE 181 (399)
T ss_pred CHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH----------hCCchHHHHHHHHHHHHHHHHhhheecCCCCccccCCH
Confidence 46789999999998888887776554443332 2457766666666665555555555555432110 0
Q ss_pred C-----------------CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH
Q 020432 85 R-----------------GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 147 (326)
Q Consensus 85 ~-----------------~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~ 147 (326)
+ ++....+..++.++||+++...+..++..........+++.|+++..+.++...+.......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (399)
T TIGR00893 182 EEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPG 261 (399)
T ss_pred HHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHH
Confidence 0 00112335778899999988888888888888888899999999988875544455555666
Q ss_pred HHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHH----HHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhh
Q 020432 148 ICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC----GAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLV 222 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~----~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~i 222 (326)
+..+++.++.+++.+|.+||+............+ ......... ++.........+.+.+.+ ..+..+++.+|..
T Consensus 262 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 340 (399)
T TIGR00893 262 IVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-AGAIGWALISDNA 340 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-hhhHHHHHHHhhc
Confidence 7788888999999888876442222111111111 111121221 122223323333334443 6788999999999
Q ss_pred cCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCC
Q 020432 223 GEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 223 d~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~ 259 (326)
|.++| |..+|..+...+++..++..+.+.+.+..+
T Consensus 341 ~~~~~--g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g 375 (399)
T TIGR00893 341 PGNIA--GLTGGLINSLGNLGGIVGPIVIGAIAATTG 375 (399)
T ss_pred ChhHH--HHHHHHHHHHHHHhhhhhhHHhhhhccCCC
Confidence 98777 667899999999999999988887754433
No 16
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.54 E-value=1.4e-12 Score=126.39 Aligned_cols=236 Identities=10% Similarity=-0.026 Sum_probs=130.1
Q ss_pred CccchhhhhhHHHHHHHHHhHHH-HHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc---C
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSL-YAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G 83 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~---~ 83 (326)
+++||.+..++...+..+|+.+. ......+. . ..||++.-.+.++++.+..++..+..||++++. +
T Consensus 150 ~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~---------~-~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 219 (452)
T PRK11273 150 SQKERGGIVSVWNCAHNVGGGLPPLLFLLGMA---------W-FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPP 219 (452)
T ss_pred ChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH---------H-hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCC
Confidence 56789888888777777664322 11111111 1 236776666666655555444444456543210 0
Q ss_pred --------------C-CCCcchhhhH-HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH
Q 020432 84 --------------L-RGNSHARISW-AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 147 (326)
Q Consensus 84 --------------~-~~~~~~~~~l-~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~ 147 (326)
+ +++.+.++.+ +.++||+.++...+..++.+........++|.|++++.|.+....+.......
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~ 299 (452)
T PRK11273 220 IEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYE 299 (452)
T ss_pred hhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 0 0001122222 34788999888777777777666777889999999887765443444444556
Q ss_pred HHHHHHHHHHHHHHHhccc-chh-hhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC
Q 020432 148 ICSFIVSILLQEMAWTGQR-LKA-YYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~~gk-kk~-~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~ 225 (326)
++.+++.++.+++.+|.++ ||. .......+..++...+++.+..+.....+.....|.+.........++..|..+.+
T Consensus 300 ~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 379 (452)
T PRK11273 300 YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK 379 (452)
T ss_pred HHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence 6777888889999877632 222 22222222222322233333333333333333334333223333445667888776
Q ss_pred CCCceEEEehhHHHHHHHhhH-HHHhhhhcc
Q 020432 226 LSGCAFVCGTLSFLDKMSCGI-AVYVLQSYQ 255 (326)
Q Consensus 226 ~r~~g~i~s~~sf~~Kl~~~i-~~~i~~~~l 255 (326)
.| |..+|.+++...++.++ +..+.|...
T Consensus 380 ~~--g~~~g~~~~~~~~g~~~~g~~v~g~l~ 408 (452)
T PRK11273 380 AA--GTAAGFTGLFGYLGGSVAASAIVGYTV 408 (452)
T ss_pred hh--hhHHHHHHHHHHHHHHHhhhhhHHHHH
Confidence 66 66788888888887665 455666553
No 17
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.53 E-value=8e-13 Score=123.28 Aligned_cols=238 Identities=11% Similarity=-0.074 Sum_probs=147.0
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC--CCC
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG--LRG 86 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~--~~~ 86 (326)
++||.+..+....+..+|.++... +..... + ..||++.-.+.+++.++....+.+..||+++++. +++
T Consensus 121 ~~~~~~~~~~~~~~~~~g~~~~~~----~~~~~~-----~-~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (377)
T TIGR00890 121 PDKRGLASGIIIGGYGLGSFILSP----LITSVI-----N-LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIE 190 (377)
T ss_pred CcccHHHHHHHHHhcchhHhHHHH----HHHHHH-----h-cccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcc
Confidence 578988888887777666554322 211111 2 2478877777777766666555555665443211 111
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
.....++.++.+|||+++.....+++..........+.+.|.++ ++.++.....+.....+..+++.++.+++.+|.+|
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~ 269 (377)
T TIGR00890 191 VSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGR 269 (377)
T ss_pred cchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 11122356788899998776665555555544455556666543 45444334444555666778888999999988885
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
|+....+..+..++...+.+.+..+....+....+.|++.+.......++++|..+.++| |..+|..+...+++..+
T Consensus 270 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~g~~~ 346 (377)
T TIGR00890 270 -QKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANS--AANYGFLYTAKAVAGIF 346 (377)
T ss_pred -hhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhh--hhHhHHHHHHHHHHHHH
Confidence 555566555545554444443322222333444556677666666777889999988776 56688999999999999
Q ss_pred HHHhhhhcccCCCc
Q 020432 247 AVYVLQSYQSMSPT 260 (326)
Q Consensus 247 ~~~i~~~~l~~~~y 260 (326)
+..+.|.+.+..||
T Consensus 347 ~~~~~g~l~~~~g~ 360 (377)
T TIGR00890 347 GGLIASHALTEIGF 360 (377)
T ss_pred HHHHHHHHHhhhch
Confidence 98888876543333
No 18
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.52 E-value=5.7e-12 Score=120.19 Aligned_cols=200 Identities=9% Similarity=-0.027 Sum_probs=124.6
Q ss_pred ccchhhhhHHHHHHHHHhhhheeeecCCCcccCCC-CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 51 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 129 (326)
Q Consensus 51 ~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~-~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 129 (326)
.||++...+.+++..+.....++..+|+.+++.++ +..+..++++.+++||+++...+...+..........+.|+|++
T Consensus 164 ~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 243 (406)
T PRK15402 164 LPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILI 243 (406)
T ss_pred cCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 46776666666665555444434456654322111 11234567788999999887666555555544555667888888
Q ss_pred HHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcC---CcchhHHHHHHHHHhhH
Q 020432 130 NDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILP---MNMSAFMYVLAIFVGIA 206 (326)
Q Consensus 130 ~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~---~~~~~~~l~~~~~~g~g 206 (326)
+..|.++...+.......++.+++.++++++.+|.++ |+....+..+..++...+.+.+ +.+....++..++.|+|
T Consensus 244 ~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 244 SGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPL-RSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG 322 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 8888765444444444455677888889999888875 5555555544444443333221 23344455566677788
Q ss_pred HHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 207 NALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 207 ~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+...+..++...+..| +++ |.++|.+++...++.++|..+.+.+
T Consensus 323 ~~~~~~~~~~~~~~~~~-~~~--g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 323 IGLANAGLYRLTLFSSD-VSK--GTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHhhhHHHHHhhhcc-ccc--cHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77666555444444433 333 7789999999999999999888876
No 19
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.50 E-value=3.6e-12 Score=122.08 Aligned_cols=234 Identities=9% Similarity=-0.013 Sum_probs=142.4
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCC--C
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR--G 86 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~--~ 86 (326)
+++|.+.++.......+|..+...+.-.+... .||++...+.++..++..+ +.+..+|.+.+++++ +
T Consensus 141 ~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~----------~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~ 209 (417)
T PRK10489 141 RENLMQAGAITMLTVRLGSVISPALGGLLIAA----------GGVAWNYGLAAAGTFITLL-PLLRLPALPPPPQPREHP 209 (417)
T ss_pred HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH----------HhhHHHHHHHHHHHHHHHH-HHHhCCCCCCCCcccccc
Confidence 46788888887777777766655544333322 2344433333333222222 223345432211111 1
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
..+.++.++..+|||.++...+..++... ......++|.|.++..|.++...+.+.....++.+++.++.+++.+|.++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~ 288 (417)
T PRK10489 210 LRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARP 288 (417)
T ss_pred hHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCc
Confidence 12334567788899987665544333322 34456788899988888765555555556667788888888888877543
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
++....+.++..++...+.+ . ++.....+...+.|++.+...+..++++.|.++++.| |..+|.++....+|+++
T Consensus 289 -~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g~~~ 363 (417)
T PRK10489 289 -GLLMLLSTLGSFLAVGLFGL-M-PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEML--GRINGLWTAQNVTGDAI 363 (417)
T ss_pred -chHHHHHHHHHHHHHHHHHc-c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHH--HHHHHHHHHHHhhhHhH
Confidence 44445544443333333332 2 2344455566677888877777888899999988776 55688999999999999
Q ss_pred HHHhhhhcccCCC
Q 020432 247 AVYVLQSYQSMSP 259 (326)
Q Consensus 247 ~~~i~~~~l~~~~ 259 (326)
|..+.|.+.+..+
T Consensus 364 g~~l~G~l~~~~g 376 (417)
T PRK10489 364 GAALLGGLGAMMT 376 (417)
T ss_pred HHHHHHHHHHHhc
Confidence 9999987754333
No 20
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.48 E-value=2.3e-12 Score=120.30 Aligned_cols=241 Identities=10% Similarity=0.038 Sum_probs=150.3
Q ss_pred CccchhhhhhHHHHHHHHHhHHHH-HHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc----
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLY-AIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---- 82 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~---- 82 (326)
+++||.+..++...+..+|..+.. .+...+. + ..+|++...+.+++.++..+++.+..+|+++++
T Consensus 113 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (379)
T TIGR00881 113 SRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA---------E-LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPP 182 (379)
T ss_pred CHhhheeeEeehhccchhHHHHHHHHHHHHHH---------h-cCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCc
Confidence 357889999988888888776654 2222221 1 246666666666666665555555566543211
Q ss_pred C-----CC-------C-C--cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH
Q 020432 83 G-----LR-------G-N--SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 147 (326)
Q Consensus 83 ~-----~~-------~-~--~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~ 147 (326)
. ++ + + .+.+...+.+++||+++.+.+.+++..........+.+.|+++..|.++...........
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 262 (379)
T TIGR00881 183 AEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYE 262 (379)
T ss_pred cccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 0 00 0 0 112234677889999988877777777777788889999999888876554555555666
Q ss_pred HHHHHHHHHHHHHHHhcc-cchhhhhHhHHHHHHHHHHH-hhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC
Q 020432 148 ICSFIVSILLQEMAWTGQ-RLKAYYSAGGVLWVFCGAGI-LILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~~g-kkk~~~~~~~~l~~~~~~~l-~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~ 225 (326)
+..+++.++.+++.+|.. +|+................. ...+..+.....+...+.|..........+++..|.+|.+
T Consensus 263 ~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 342 (379)
T TIGR00881 263 LGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKK 342 (379)
T ss_pred HHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcc
Confidence 777888888999887543 22322211111111122222 2222233333444445556555555566678889999887
Q ss_pred CCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCc
Q 020432 226 LSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPT 260 (326)
Q Consensus 226 ~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y 260 (326)
.| |...|..+...+++..++..+.|.+.+..||
T Consensus 343 ~~--g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~ 375 (379)
T TIGR00881 343 AA--GTAAGFVGFFAYLGGILAGLPLGYLADGFGW 375 (379)
T ss_pred hh--HHHHHHHHHhhhhhhhhhhhhHHHHHHhhcc
Confidence 77 6678999999999999999888887766665
No 21
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.48 E-value=1.6e-12 Score=121.63 Aligned_cols=232 Identities=6% Similarity=-0.065 Sum_probs=135.1
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhh-hHHHHHHHHHhhhheeeecCCCcccCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIA-YSSIFIGCCFVGIFLSRTEEPRLKMGLRG 86 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~i~~~i~~~~~~~~~~~tkE~~~~~~~~~ 86 (326)
+++||.+..++...+..+|..+...+.+.+........+++...+|++.. ++.+++..+..++.+...+|++.++++++
T Consensus 120 ~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (366)
T TIGR00886 120 PKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATG 199 (366)
T ss_pred CHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccccch
Confidence 46789999999987777777666555544443321110011124677665 33344444433333334455332111111
Q ss_pred Ccch-----------hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHH
Q 020432 87 NSHA-----------RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSI 155 (326)
Q Consensus 87 ~~~~-----------~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~ 155 (326)
+.+. .+..+..++||+++...+.+++..........+.++|+++.+|.++...+.+.....+..+++.+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (366)
T TIGR00886 200 KLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARP 279 (366)
T ss_pred hcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhh
Confidence 1110 11567788899988777777766666667788999999998887655445455556667788888
Q ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCc--chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEE
Q 020432 156 LLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMN--MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVC 233 (326)
Q Consensus 156 ~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~--~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~ 233 (326)
+.+++.+|.+||| ....+......+..++.+...+ +....++...+.+++.+......+++.+|..+. +.|..+
T Consensus 280 ~~g~l~~r~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~g~~~ 355 (366)
T TIGR00886 280 LGGAISDRLGGAR-KLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRR---ATGAVS 355 (366)
T ss_pred ccchHHHhhccch-hHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchh---hcccHH
Confidence 8889998888644 4444444433333333322222 333334444445555555666788889988863 336667
Q ss_pred ehhHHHHHHH
Q 020432 234 GTLSFLDKMS 243 (326)
Q Consensus 234 s~~sf~~Kl~ 243 (326)
|..+...++|
T Consensus 356 g~~~~~~~~g 365 (366)
T TIGR00886 356 GLVGAIGNLG 365 (366)
T ss_pred HHHHHhccCC
Confidence 7776666554
No 22
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.47 E-value=9.8e-12 Score=116.87 Aligned_cols=230 Identities=13% Similarity=0.037 Sum_probs=144.4
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCc
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNS 88 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~ 88 (326)
++||.+..+.......+|..+...+...+.+ ..||+....+.+++..+..+...+..+|++.+++++++.
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (385)
T TIGR00710 124 GEELSRIYSILMPVLALAPAVAPLLGGYILV----------WLSWHAIFAFLSLAGILLSALIFFILPETLPYEARIQIS 193 (385)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccCCHH
Confidence 6789999998888777776665444433322 246777666666666555555545566654322222222
Q ss_pred chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 89 HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
...+.++..+|||+++...+.+.+..........+.|+|+++..|.++...+.+.....+..+++.++.+++.+|.++ |
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~-~ 272 (385)
T TIGR00710 194 TYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGA-K 272 (385)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-H
Confidence 345577888999999877766666666666677788999888888766555555556677788889999999988885 4
Q ss_pred hhhhHhHHHHHHHHHHHhhcC--C-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhh
Q 020432 169 AYYSAGGVLWVFCGAGILILP--M-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCG 245 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~--~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~ 245 (326)
+....+..+..++..++.+.. . ...........+.|+|.+......++...|..+ +++ |...+..+.....+.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~--g~~~~~~~~~~~~~g~ 349 (385)
T TIGR00710 273 SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HVA--GTASALFGTLRLVLGA 349 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-ccc--hHHHHHHHHHHHHHHH
Confidence 445555544444443333221 1 122333444556777777776666666555544 223 5556777777666666
Q ss_pred HHHHhhh
Q 020432 246 IAVYVLQ 252 (326)
Q Consensus 246 i~~~i~~ 252 (326)
+.+.+++
T Consensus 350 i~~~~~~ 356 (385)
T TIGR00710 350 IVGYLVS 356 (385)
T ss_pred HHHHHHH
Confidence 7666666
No 23
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.47 E-value=1.8e-11 Score=120.08 Aligned_cols=240 Identities=11% Similarity=0.026 Sum_probs=141.9
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+++||.+.++++..+..+|.++...+...+.+ . ..||+....+.++++++..+..++ .||+.+.++++++
T Consensus 137 ~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~--------~-~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~~~~~~ 206 (491)
T PRK11010 137 PAEERGAGAAISVLGYRLAMLVSGGLALWLAD--------R-YLGWQGMYWLMAALLIPCIIATLL-APEPTDTIPVPKT 206 (491)
T ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh--------c-ccCHHHHHHHHHHHHHHHHHHHHh-cCCCccccccccc
Confidence 47899999999999888888776554433322 0 147888777777766666555444 6886432211111
Q ss_pred --cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhh-HHHHHHHHHHHHHHHHHHHhc
Q 020432 88 --SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVP-AIIYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 88 --~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~-~~~~i~~~i~~~~~~~l~k~~ 164 (326)
.+..+.+++.++++..+...+..++..........+.+.|+.+..|.+++..+... ....++.+++.++.+++.+|.
T Consensus 207 ~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~ 286 (491)
T PRK11010 207 LEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL 286 (491)
T ss_pred hhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12334677888777766555445555555555566777787777887665555554 344568889999999999888
Q ss_pred ccchhhhhHhHHHHHHHHHHHhh--cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHH
Q 020432 165 QRLKAYYSAGGVLWVFCGAGILI--LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKM 242 (326)
Q Consensus 165 gkkk~~~~~~~~l~~~~~~~l~~--~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl 242 (326)
++|| ....+.++..+....++. ...++...+.....+..++.+......+++..|.++.+.+ |..++..+...-+
T Consensus 287 g~~~-~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~--~t~~gl~~s~~~l 363 (491)
T PRK11010 287 SLFR-ALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFS--ATQFALLSALSAV 363 (491)
T ss_pred hHHH-HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCc--HHHHHHHHHHHHH
Confidence 8644 344433332332222221 1112333333333443444444455668888899887655 4446666666656
Q ss_pred HhhHHHHhhhhcccCCCc
Q 020432 243 SCGIAVYVLQSYQSMSPT 260 (326)
Q Consensus 243 ~~~i~~~i~~~~l~~~~y 260 (326)
+..+++.+.|++.+..||
T Consensus 364 g~~~~~~~~G~l~~~~G~ 381 (491)
T PRK11010 364 GRVYVGPVAGWFVEAHGW 381 (491)
T ss_pred HHHHHHHHHHHHHHHhCh
Confidence 655565566655433333
No 24
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.44 E-value=4.9e-11 Score=113.30 Aligned_cols=233 Identities=6% Similarity=-0.042 Sum_probs=135.7
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+++||.+.++.-.....+|.++...+...+.+ ..||+....+.+++.++..+...+..||+..+.+++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (408)
T PRK09874 136 PRNKSGWALGTLSTGGVSGALLGPLAGGLLAD----------SYGLRPVFFITASVLFLCFLVTLFCIRENFQPVSKKEM 205 (408)
T ss_pred CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhCHHHHHHHHHHHHHHHHHHHHHHhccCcccccchhh
Confidence 45677777777666666665554443333322 24566655566665555555555556765432212111
Q ss_pred cchhhhHHHHhhchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc---chhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 88 SHARISWAYWFKKILYYQV-ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSA---KALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~---~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
.+ .++....++|++++.. ....++..........+++.|..+..+..... ...+..+..++.+++.+.++++.+|
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr 284 (408)
T PRK09874 206 LH-MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDR 284 (408)
T ss_pred hH-HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22 2334455678776543 33333444444455667777877755432211 1222223345566777778888888
Q ss_pred cccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHH
Q 020432 164 GQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMS 243 (326)
Q Consensus 164 ~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~ 243 (326)
.+| |+....+..+..+..+.+.+. ++.+..++...+.|++.+...+...+++.|..+.+.+ |..++.++...++|
T Consensus 285 ~g~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~g 359 (408)
T PRK09874 285 IGP-EKILITALIFSVLLLIPMSFV--QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIA--GRIFSYNQSFRDIG 359 (408)
T ss_pred ccc-chhHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccc--eeeehHHHHHHHHH
Confidence 885 555555554433333333322 2345555666778888888777777777777665554 77899999999999
Q ss_pred hhHHHHhhhhccc
Q 020432 244 CGIAVYVLQSYQS 256 (326)
Q Consensus 244 ~~i~~~i~~~~l~ 256 (326)
..+|..+.|.+.+
T Consensus 360 ~~~gp~~~G~l~~ 372 (408)
T PRK09874 360 NVTGPLMGAAISA 372 (408)
T ss_pred HHhhHHHHHHHHh
Confidence 9999888876643
No 25
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.44 E-value=1.5e-11 Score=120.64 Aligned_cols=233 Identities=8% Similarity=-0.003 Sum_probs=153.8
Q ss_pred CCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCC
Q 020432 7 LNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG 86 (326)
Q Consensus 7 ~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~ 86 (326)
.+++||.+..++-.....+|..+...+...+.+ ..||++.-.+...++++..++..+..+|++.++.+
T Consensus 124 ~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~----------~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~-- 191 (495)
T PRK14995 124 TEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE----------HFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQ-- 191 (495)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------cCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCC--
Confidence 456889999888877777776555444333322 24677766665555555544444445554322111
Q ss_pred Ccch---------------------------------------------hhhH--------HHHhhchhHHHHHHHHHHH
Q 020432 87 NSHA---------------------------------------------RISW--------AYWFKKILYYQVALVYMLT 113 (326)
Q Consensus 87 ~~~~---------------------------------------------~~~l--------~~~~~N~~~~~~~~~~~~~ 113 (326)
+.+. ..+. ..++|||.+....+..++.
T Consensus 192 ~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~ 271 (495)
T PRK14995 192 PLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGVVMAMTA 271 (495)
T ss_pred CCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHHHHHHHH
Confidence 1100 0011 2578888888777777777
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC-cc
Q 020432 114 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM-NM 192 (326)
Q Consensus 114 ~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~-~~ 192 (326)
.........++|.|++.+.|.++...+.......++..+++++.+++.+|.|+ |+....+.++..++...+.+... .+
T Consensus 272 ~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~-~~~~~~g~~~~~~~~~~l~~~~~~~~ 350 (495)
T PRK14995 272 MITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGL-RLVATGGMALSALSFYGLAMTDFSTQ 350 (495)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc-hHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 77666777899999999999876656666666778888899999999988885 55566666555544444433332 23
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 193 SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+......++.|+|.+........+..+.++++++ |...+.+++.+.+|.++|.++.+.+
T Consensus 351 ~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 351 QWQAWGLMALLGFSAASALLASTSAIMAAAPPEKA--AAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhc--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455567778899888877777777787776665 5667899999999998888776655
No 26
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.43 E-value=5.6e-11 Score=113.38 Aligned_cols=163 Identities=10% Similarity=-0.035 Sum_probs=101.3
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~ 82 (326)
+|. .+++||.+.+++|..+..+|.++...+...+.+. .-||+....+.+++.++..+.. +..+|+..++
T Consensus 120 ~~~-~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~---------~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~~~ 188 (402)
T PRK11902 120 TDV-LHPEERGAGAAVKVLGYRLAMLVSGGLALWLADR---------VLGWGNTYLLMAGLMLAGALTT-LWAPEPEVPA 188 (402)
T ss_pred HHh-cChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc---------ccCHHHHHHHHHHHHHHHHHHH-HhcCCCcccc
Confidence 455 3567899999999998888887765554433321 1367776666666655544433 3456654332
Q ss_pred CCCC--CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHH-HHHHHHHHHHHHHH
Q 020432 83 GLRG--NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI-IYICSFIVSILLQE 159 (326)
Q Consensus 83 ~~~~--~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~-~~i~~~i~~~~~~~ 159 (326)
.+++ +.+.++.++.++|||.++..++..++..........+.++|+.+..|.+++..+.+... ..++.+++.++.++
T Consensus 189 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~ 268 (402)
T PRK11902 189 RPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGT 268 (402)
T ss_pred cccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 1111 12345678899999998876665555555444444556667777778765545444332 33457888899999
Q ss_pred HHHhcccchhhhhHhHHH
Q 020432 160 MAWTGQRLKAYYSAGGVL 177 (326)
Q Consensus 160 l~k~~gkkk~~~~~~~~l 177 (326)
+.||.++|| ....+..+
T Consensus 269 l~~r~g~~~-~l~~~~~~ 285 (402)
T PRK11902 269 LMVRLGLYR-SLMLFGVL 285 (402)
T ss_pred HHHHHhHHH-HHHHHHHH
Confidence 998888644 44444433
No 27
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.43 E-value=2.5e-11 Score=117.04 Aligned_cols=240 Identities=9% Similarity=0.008 Sum_probs=134.1
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc---C-
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G- 83 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~---~- 83 (326)
+++||.+..++...+..+|..+...+...+.+ ..||++...+.++++++..++.++..||++... +
T Consensus 141 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~ 210 (434)
T PRK11663 141 SRTERGGWWAIWNTAHNVGGALIPLVVGAIAL----------HYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSV 210 (434)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------cccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCc
Confidence 45789999999888888887665444333322 246777666666655544333333455543210 0
Q ss_pred ----------CCC----CcchhhhHH-HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHH
Q 020432 84 ----------LRG----NSHARISWA-YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYI 148 (326)
Q Consensus 84 ----------~~~----~~~~~~~l~-~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i 148 (326)
.++ +.+.++.++ ..++|+.++.....+++..........++|.|+++..|.+............+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~ 290 (434)
T PRK11663 211 GEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFEL 290 (434)
T ss_pred ccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHH
Confidence 000 011222232 36678888877766666666666777899999988778765444445555667
Q ss_pred HHHHHHHHHHHHHHhcc--cchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC
Q 020432 149 CSFIVSILLQEMAWTGQ--RLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL 226 (326)
Q Consensus 149 ~~~i~~~~~~~l~k~~g--kkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~ 226 (326)
+.+++.++.+++.+|+. +|+................+...+..+...........|++............+|..+.+.
T Consensus 291 ~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (434)
T PRK11663 291 GGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA 370 (434)
T ss_pred HHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh
Confidence 78888999999987662 2222211211111112222222332222222222222333222222233345556555444
Q ss_pred CCceEEEehhHHHHHHHhhHHHHhhhhcccCCC
Q 020432 227 SGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 227 r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~ 259 (326)
| |...+..++...+|.+++..+.|++.+..|
T Consensus 371 ~--g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g 401 (434)
T PRK11663 371 A--GAATGFVGLFAYLGAALSGYPLAKVLEIWH 401 (434)
T ss_pred H--HhHHHHHHHHHHHHHHHhcccHHHHHHhcc
Confidence 4 777899999999999999988887654333
No 28
>PRK03545 putative arabinose transporter; Provisional
Probab=99.43 E-value=4.3e-11 Score=113.58 Aligned_cols=228 Identities=12% Similarity=0.010 Sum_probs=140.5
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+++||.+..++...+..+|..+...+...+.+ ..||++.-.+.++++++.....+...+|++++ ++
T Consensus 127 ~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~----------~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~----~~ 192 (390)
T PRK03545 127 PAGKKAQALSLLATGTALAMVLGLPLGRVIGQ----------YLGWRTTFLAIGGGALITLLLLIKLLPLLPSE----HS 192 (390)
T ss_pred ChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH----------HhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCC----Cc
Confidence 36789999999887777776654443333221 24788777777766665555444444543221 11
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
+..+++++.+|||+++......++..........+.+.|.++..|.++...+.+.....++.+++.++.+++.+|.++
T Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~- 270 (390)
T PRK03545 193 -GSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPS- 270 (390)
T ss_pred -chHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccch-
Confidence 123467889999998766555555555555556777778887777655444555555667788889999999888774
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
|.. ..+..+...+...+...+ ++.+...+...+.|++.+.......+.+.|..++ +| |...|..+....+|+++|
T Consensus 271 ~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~-~~--~~~~g~~~~~~~~g~~~G 345 (390)
T PRK03545 271 GFL-LIAIALLLVCLLLLLPAA-NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPD-AT--DVAMALFSGIFNIGIGAG 345 (390)
T ss_pred hHH-HHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCC-cH--HHHHHHHHHHHHHHHHHH
Confidence 443 333333233322222222 3344455556667777655545555555565443 33 455788888899999998
Q ss_pred HHhhhhccc
Q 020432 248 VYVLQSYQS 256 (326)
Q Consensus 248 ~~i~~~~l~ 256 (326)
..+.|.+.+
T Consensus 346 ~~~~G~~~~ 354 (390)
T PRK03545 346 ALLGNQVSL 354 (390)
T ss_pred HHHHHHHHh
Confidence 888887643
No 29
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.42 E-value=1.9e-12 Score=119.91 Aligned_cols=230 Identities=14% Similarity=0.160 Sum_probs=144.1
Q ss_pred cccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhh--heeeecCCCcc
Q 020432 4 CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGI--FLSRTEEPRLK 81 (326)
Q Consensus 4 ~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~--~~~~tkE~~~~ 81 (326)
+..++ +||.+..+.......+|.++...+...+. + ..||++...+.+++.++..++ .++..+|+.++
T Consensus 112 ~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---------~-~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~ 180 (352)
T PF07690_consen 112 DWFPP-EERGRAFGILSAGFSLGSILGPLLGGFLI---------S-YFGWRWAFLISAILSLIAAILFILFLPEPPPPRE 180 (352)
T ss_dssp HCCCT-CCHHHHHHHHHHHHHHHHHHHHHHHHHCC---------C-HCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT
T ss_pred ccchh-hhhhhccccccchhhhhhhcccchhhhhh---------h-ccccccccccccchhhhhhhhHhhhhhhcccccc
Confidence 44444 89999999999888888766655443332 1 245766666666666665543 22222222221
Q ss_pred cCCCCCc------chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchhhhHHHHHHHHHHH
Q 020432 82 MGLRGNS------HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG-QSAKALVPAIIYICSFIVS 154 (326)
Q Consensus 82 ~~~~~~~------~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~-~~~~~~~~~~~~i~~~i~~ 154 (326)
++++++. +.++.+|.+++||.++......++..........+.|.|.++..|.+ ......+.....+..+++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (352)
T PF07690_consen 181 RESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGS 260 (352)
T ss_dssp --SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 12223788888888764444455555566668889999988888876 3444444556666777778
Q ss_pred HHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEE
Q 020432 155 ILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVC 233 (326)
Q Consensus 155 ~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~ 233 (326)
++.+++.+|.++|+. .........+....+.+.+. ++....++...+.|++.+...+...++..|.+|++++ |..+
T Consensus 261 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~ 337 (352)
T PF07690_consen 261 LLAGRLSDRFGRRRR-LLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYR--GTAF 337 (352)
T ss_dssp HHHHHHHHHTTCHHH-HHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHH--HHHH
T ss_pred HHHHHHHHHcCcHHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHH
Confidence 889999888775343 33334333333333333322 3445566677788899888889999999999988776 6678
Q ss_pred ehhHHHHHHHhhHH
Q 020432 234 GTLSFLDKMSCGIA 247 (326)
Q Consensus 234 s~~sf~~Kl~~~i~ 247 (326)
|..+....++..+|
T Consensus 338 g~~~~~~~~~~~ig 351 (352)
T PF07690_consen 338 GLFNSIGSLGGIIG 351 (352)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC
Confidence 88888888877665
No 30
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.42 E-value=1.8e-10 Score=111.94 Aligned_cols=255 Identities=12% Similarity=0.043 Sum_probs=167.4
Q ss_pred CcccccCCccchh-hhhhHHHHHHHHHhHHHHHHHHHH--HHhccCCCc---cchhccchhhhhHHHHHHHHHhhhheee
Q 020432 1 MVNCITLNSTSRV-VLTSCRNAFTMVANLSLYAIAFIV--FSVSTAKTH---ADLENQYRWIAYSSIFIGCCFVGIFLSR 74 (326)
Q Consensus 1 l~~~lT~d~~eR~-~l~s~R~~~~~~g~~~~~~~~~~~--~~~~~~~~~---~~~~~g~~~~~~i~~~i~~~~~~~~~~~ 74 (326)
+.++++++++||+ ..+++...+..+|+++...+.... .+.++..+. +..-.+++....+-+++.+++.+++.+.
T Consensus 138 LiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~ 217 (477)
T TIGR01301 138 FLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSA 217 (477)
T ss_pred hcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeee
Confidence 4678999998886 678899999999998887765432 222111100 1111256666666667778888888889
Q ss_pred ecCCCcccCC---------CCCcc----hhhhHHHHhh-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCcc--
Q 020432 75 TEEPRLKMGL---------RGNSH----ARISWAYWFK-KILYYQVALVYMLTRLVVNVSQAYLAFYVIN-DLRMGQS-- 137 (326)
Q Consensus 75 tkE~~~~~~~---------~~~~~----~~~~l~~~~~-N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~l~~~~~-- 137 (326)
+||++...++ .++.. +++-++.+.+ .|++++++++.++++++..-...|..-|+-. +.+.++.
T Consensus 218 v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~ 297 (477)
T TIGR01301 218 VKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG 297 (477)
T ss_pred eeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch
Confidence 9996531111 01111 1222333332 2557788899999999988887777777664 3332111
Q ss_pred -----c---chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC--cc---------------
Q 020432 138 -----A---KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM--NM--------------- 192 (326)
Q Consensus 138 -----~---~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~--~~--------------- 192 (326)
. -........+...+.+++.+++.|+.|+||.++..+.++.+++.....++.. ++
T Consensus 298 ~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~ 377 (477)
T TIGR01301 298 AKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPT 377 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcch
Confidence 1 1223334555566777888899998875467778887776666655554321 10
Q ss_pred --hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 193 --SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 193 --~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
....++...+.|+..+..+.+|++++++.++++.|+.|.+.|+.+++.=+.|=+.....|.+.
T Consensus 378 ~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~ 442 (477)
T TIGR01301 378 GIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWD 442 (477)
T ss_pred hhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 255667777889999999999999999999976666799999999999988877666555543
No 31
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.41 E-value=7.7e-11 Score=112.47 Aligned_cols=237 Identities=11% Similarity=0.038 Sum_probs=133.1
Q ss_pred CccchhhhhhHHHHHHHHHhH-HHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCC-
Q 020432 8 NSTSRVVLTSCRNAFTMVANL-SLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR- 85 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~- 85 (326)
+++||.+.++.-.....+|.. ....+...+.+..| .....|+.. ....++ ..++++..||++++++++
T Consensus 135 ~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g-----~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~ 204 (402)
T TIGR00897 135 KQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG-----EMNTLWSAL--AFVLTG---GVIALFSNKDIFTPQHMQT 204 (402)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-----hHHHHHHHH--HHHHHH---HHHHHhccCCCCCcccccC
Confidence 578899999988777666642 22222212222111 111123322 222222 122222344432221111
Q ss_pred -CC-cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 86 -GN-SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 86 -~~-~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
++ .+.++.++.++|||+++...+.+++..........+.|+|.++ .|.++...........++.+++.+..+++.+|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 283 (402)
T TIGR00897 205 REKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDK 283 (402)
T ss_pred CcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 1234457789999999877777777767667778899999876 67654433444445567788889999999988
Q ss_pred cccchhhhhHhHHHHHHHHHHHhhcC---CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHH
Q 020432 164 GQRLKAYYSAGGVLWVFCGAGILILP---MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLD 240 (326)
Q Consensus 164 ~gkkk~~~~~~~~l~~~~~~~l~~~~---~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~ 240 (326)
.++||.....+.....+....+.+.+ .++.+..++...+.|++.+...+. .+.++|.. .++| |..+|..++..
T Consensus 284 ~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~-~~~~--g~~~g~~~~~~ 359 (402)
T TIGR00897 284 LGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVPL-AAVFPTLA-PKHK--GAAMSVLNLSA 359 (402)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHH-HHHHHhhC-cchh--HHHHHHHHHHH
Confidence 88644432222222222222222222 123344445556667776655443 45556643 3344 66789999999
Q ss_pred HHHhhHHHHhhhhcccCCC
Q 020432 241 KMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 241 Kl~~~i~~~i~~~~l~~~~ 259 (326)
.++..++..+.+.+.+..|
T Consensus 360 ~lg~~~gp~i~g~l~~~~g 378 (402)
T TIGR00897 360 GLSAFLAPAIAVLFIGFFG 378 (402)
T ss_pred HHHHHHHHHHHHHHHhhcc
Confidence 9999998888887654433
No 32
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.40 E-value=2.5e-11 Score=114.71 Aligned_cols=240 Identities=11% Similarity=-0.015 Sum_probs=138.6
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC-CCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LRG 86 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~-~~~ 86 (326)
+++||.+.+++...+..+|..+...+...+....+ .+|++...+.++..++ .++.....+|++..++ +++
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~--------~~w~~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 200 (405)
T TIGR00891 130 PKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWG--------DGWRALFFISILPIIF-ALWLRKNIPEAEDWKEKHAG 200 (405)
T ss_pred ChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------ccHHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHhhh
Confidence 35789999999998888887776655544443321 2466655443333333 2333344566432111 010
Q ss_pred CcchhhhHHHHhhch----------------------h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhh
Q 020432 87 NSHARISWAYWFKKI----------------------L-YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVP 143 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~----------------------~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~ 143 (326)
+...++..++..+++ + +........+..........++|.|+++..|.++...+.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~ 280 (405)
T TIGR00891 201 KALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIV 280 (405)
T ss_pred hhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHH
Confidence 011111111111111 1 22222333333444445567889999888887655555555
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhc
Q 020432 144 AIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVG 223 (326)
Q Consensus 144 ~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id 223 (326)
....++.+++.++.+++.+|.+| |+.+..+..+..+....++... .+.....+...+.+.+.+......+++++|..+
T Consensus 281 ~~~~~~~~~g~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (405)
T TIGR00891 281 VFSNIGAIVGGCVFGFLGDWLGR-RKAYVCSLLAGQLLIIPVFAIG-ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFP 358 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCc-hhhhHHHHHHHHHHHHHHHHhC-CchHHHHHHHHHHHHHHccchhhHHHHHhhhCC
Confidence 56677888999999999998886 5555555543322222222222 333333334355555555566677789999998
Q ss_pred CCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCC-c
Q 020432 224 EDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP-T 260 (326)
Q Consensus 224 ~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~-y 260 (326)
+++| |..+|.......++..++..+.|.+.+..| |
T Consensus 359 ~~~~--~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~ 394 (405)
T TIGR00891 359 TDQR--AAGLGFTYQLGNLGGALAPIIGALLAQRLDEY 394 (405)
T ss_pred cchh--HHHhhHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 8777 667888888889999999998888766655 5
No 33
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.39 E-value=1.3e-11 Score=120.16 Aligned_cols=239 Identities=9% Similarity=-0.049 Sum_probs=136.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcc------
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK------ 81 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~------ 81 (326)
+++||.+..++......+|..+...+...+..... ..+|+..-.+.++++++..+++++..||++++
T Consensus 152 ~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~-------~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~ 224 (467)
T PRK09556 152 PRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF-------DGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA 224 (467)
T ss_pred CccceeeeEEeeecccchhhhHHHHHHHHHHHhhc-------cCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh
Confidence 45788999898888888887766554433333210 01344333444555554444444434432211
Q ss_pred ------c-CCCC------CcchhhhH-HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH
Q 020432 82 ------M-GLRG------NSHARISW-AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 147 (326)
Q Consensus 82 ------~-~~~~------~~~~~~~l-~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~ 147 (326)
+ .+++ +.+.++.+ +..+|||.++...+.+++..........+.|.|+++..|.++...+.......
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~ 304 (467)
T PRK09556 225 EEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFE 304 (467)
T ss_pred hhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHH
Confidence 0 0000 01111222 34789999988888777777777778889999999888876544444445566
Q ss_pred HHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCC
Q 020432 148 ICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLS 227 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r 227 (326)
++.+++.++.+++++|.++||. ......+...+...+.+...++.....+..++.|++.........+...|..+.+.+
T Consensus 305 ~~~~ig~~~~G~lsDr~g~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~ 383 (467)
T PRK09556 305 IGALVGSLLWGWLSDLANGRRA-LVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAI 383 (467)
T ss_pred HHHHHHHHHHHHHHHHHCCCch-HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhH
Confidence 7788999999999988876443 333332222222112211223333444444455543333333333555688877666
Q ss_pred CceEEEehhHHHHHH-HhhHHHHhhhhccc
Q 020432 228 GCAFVCGTLSFLDKM-SCGIAVYVLQSYQS 256 (326)
Q Consensus 228 ~~g~i~s~~sf~~Kl-~~~i~~~i~~~~l~ 256 (326)
|...|..+...-+ +.+++..++|.+.+
T Consensus 384 --g~a~gi~~~~g~l~g~~~~~~~~G~i~~ 411 (467)
T PRK09556 384 --GVANGIKGTFAYLFGDSFAKVGLGMIAD 411 (467)
T ss_pred --HHHHHHHHHHHHHHhHHHHhhhHHHHhc
Confidence 6656777666665 55677778887765
No 34
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.38 E-value=1.4e-10 Score=110.36 Aligned_cols=233 Identities=12% Similarity=0.035 Sum_probs=137.5
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCC-
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG- 86 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~- 86 (326)
++++|.+.+++-..+..+|..+...+...+. + ..+|+....+.+++.++......+..+|+++.+++++
T Consensus 133 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 202 (406)
T PRK11551 133 GPRLRGTAVSLMYCGVPFGGALASVIGVLAA---------G-DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGA 202 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------c-ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCc
Confidence 4578999888877776676655443332221 1 2467665555555444444434344566543211111
Q ss_pred CcchhhhHHHHhhc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 87 NSHARISWAYWFKK---ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 87 ~~~~~~~l~~~~~N---~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
+....+..+..+++ +..+.....+++..........+.|.|.++ .|.++...+.......++.+++.++.+++.+|
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr 281 (406)
T PRK11551 203 GKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDR 281 (406)
T ss_pred chhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111122333333 223333333444444445556778888775 46655445555556677888899999999988
Q ss_pred cccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHH
Q 020432 164 GQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMS 243 (326)
Q Consensus 164 ~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~ 243 (326)
.++ |+....+.+...++...+.+.+ +.+...+..++.|++.+..+...+++.+|..+.++| |...|..+....++
T Consensus 282 ~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g 356 (406)
T PRK11551 282 LRP-RRVVLLIYAGILASLAALAAAP--SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVR--GTGVGAAVAVGRLG 356 (406)
T ss_pred HhH-HHHHHHHHHHHHHHHHHHHhcC--cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhh--hhhhhHHHHhhhHH
Confidence 875 4444444433333333333222 344455566677777777788888999999988777 56678888888999
Q ss_pred hhHHHHhhhhccc
Q 020432 244 CGIAVYVLQSYQS 256 (326)
Q Consensus 244 ~~i~~~i~~~~l~ 256 (326)
..++..+.|.+.+
T Consensus 357 ~~~g~~~~g~l~~ 369 (406)
T PRK11551 357 SMAGPLLAGQLLA 369 (406)
T ss_pred HHHHhhhHhhhhc
Confidence 8888888887654
No 35
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.38 E-value=1.2e-10 Score=110.02 Aligned_cols=228 Identities=7% Similarity=0.023 Sum_probs=142.5
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCC-CC
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-GN 87 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~-~~ 87 (326)
++||.+..+....+..+|..+...+...+.+ ..||+..-.+.++++++..+++++..+|+++.+.+. ++
T Consensus 109 ~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~----------~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~~~~ 178 (368)
T TIGR00903 109 EERRDLVISLLSFAMYLGIIFALAAGLKIYT----------AGGLQLLIIPIAAVAAAGIILVLAALPALPFQAAEGFGF 178 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------ccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCcch
Confidence 6899999999999988998877665555432 257888777778887777776666778854322111 11
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
.+..+++++++|||.++...+.+++..........+.|.|++. .|.+.+ .+.......+ .+.+....+.+|..||
T Consensus 179 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~---~g~~g~~~~~d~~~r~ 253 (368)
T TIGR00903 179 KDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAIL---AGLIGVAVIPDRVARA 253 (368)
T ss_pred HHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHH---HHHHHHHHhhHHhhhh
Confidence 1223468899999999988888888888888889999999975 454332 2222222222 2233333444433321
Q ss_pred --hhhhhH-hHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHh
Q 020432 168 --KAYYSA-GGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSC 244 (326)
Q Consensus 168 --k~~~~~-~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~ 244 (326)
|+.... ...+.++....+. .. .+.........+.+++........+++.+|+.+.+.| |...+......+++.
T Consensus 254 ~~r~~~~~~~~~~~a~~~~~~~-~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~r--gt~~G~~~~~g~~~~ 329 (368)
T TIGR00903 254 GLRSIYIRAAALLIAAFFLALA-FE-LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELH--GKAAGAIGFTSRAIS 329 (368)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-Hc-cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhc--CcccchhhHHHHHHH
Confidence 222222 2222222222222 12 2233333344455666666667788999999998887 666888899999987
Q ss_pred hHHHHhhhhcc
Q 020432 245 GIAVYVLQSYQ 255 (326)
Q Consensus 245 ~i~~~i~~~~l 255 (326)
..+..+.+.+.
T Consensus 330 ~~~~~~~~~~~ 340 (368)
T TIGR00903 330 VALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHh
Confidence 67777666554
No 36
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.38 E-value=3.3e-11 Score=117.20 Aligned_cols=157 Identities=11% Similarity=0.000 Sum_probs=112.2
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhH
Q 020432 96 YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGG 175 (326)
Q Consensus 96 ~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~ 175 (326)
.++|||+++...+..++..........+.|.|++++.|.++...+.......++.+++.++.+++.+|.++ |+....+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~-~~~~~~g~ 328 (485)
T TIGR00711 250 RLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDP-RKLVTIGL 328 (485)
T ss_pred HHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc-HHHHHHHH
Confidence 46789988877777777777777777899999999988866555555566677888899999999988885 55566666
Q ss_pred HHHHHHHHHHh-hcCCc-chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 176 VLWVFCGAGIL-ILPMN-MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 176 ~l~~~~~~~l~-~~~~~-~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
.+.+++..++. ...++ +.........+.|+|.+...........+.++++++ |...|..++.+++|.++|..+.+.
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 329 ILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKI--ARGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH--hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544444 22222 334455556778888887766555566666665555 677899999999999999887765
Q ss_pred cc
Q 020432 254 YQ 255 (326)
Q Consensus 254 ~l 255 (326)
+.
T Consensus 407 ~~ 408 (485)
T TIGR00711 407 IL 408 (485)
T ss_pred HH
Confidence 54
No 37
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.36 E-value=7.3e-11 Score=126.66 Aligned_cols=241 Identities=14% Similarity=0.029 Sum_probs=150.9
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~ 82 (326)
++++++ +||.+.+++...+..+|.++...+...+....+..+ .+...++.+...+.++...+..++..+..+|.+..+
T Consensus 129 ~~~~~~-~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (1146)
T PRK08633 129 PELVGK-ENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNT-PSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAA 206 (1146)
T ss_pred HHhcCc-ccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCC
Confidence 455544 789999999999999888877666554444311110 110112222222222222222222223345533221
Q ss_pred CC---CC----CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchhhhHHHHHHHHHHH
Q 020432 83 GL---RG----NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS-AKALVPAIIYICSFIVS 154 (326)
Q Consensus 83 ~~---~~----~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~-~~~~~~~~~~i~~~i~~ 154 (326)
.. ++ ....++.++.+++||.++...+...+.+........+++.|+++.+|.++. ..+.+.....++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~ 286 (1146)
T PRK08633 207 PEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGS 286 (1146)
T ss_pred cccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 11 10 012345678889999988776666666666677788899999999888655 45566666777888889
Q ss_pred HHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEe
Q 020432 155 ILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCG 234 (326)
Q Consensus 155 ~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s 234 (326)
++++++.+|.++ +....++.++.+++.+.+.+.+ +.+..++..++.|++.+......++++.+..+.+.| |..+|
T Consensus 287 ~~~g~l~~r~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~r--g~~~~ 361 (1146)
T PRK08633 287 LLAGRLSGRHIE-LGLVPLGALGLALSLFLLPTAP--SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKEL--GKVLA 361 (1146)
T ss_pred HHHHHHhCCceE-ccchhHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccch--hhhhH
Confidence 999999888775 4445555544444433333322 445555666778888888888888999998888777 66789
Q ss_pred hhHHHHHHHhhHHHHh
Q 020432 235 TLSFLDKMSCGIAVYV 250 (326)
Q Consensus 235 ~~sf~~Kl~~~i~~~i 250 (326)
+.++..+++..++..+
T Consensus 362 ~~~~~~~lg~~~~~~~ 377 (1146)
T PRK08633 362 ANNFLQNVGMLLFLAL 377 (1146)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999987555443
No 38
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.36 E-value=1e-10 Score=109.67 Aligned_cols=200 Identities=8% Similarity=-0.085 Sum_probs=122.0
Q ss_pred ccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 51 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 130 (326)
Q Consensus 51 ~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 130 (326)
.||++...+.+++.++..++..+..+|++.+++++ ..+.+.+..++||+++......++..........+.|.|+++
T Consensus 152 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (375)
T TIGR00899 152 FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA---LTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIH 228 (375)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc---cCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 46777766666665555555444466644322111 112345667888888766555555554445556678888888
Q ss_pred HhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHH
Q 020432 131 DLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALM 210 (326)
Q Consensus 131 ~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~ 210 (326)
..|.++...+.+.....+..+++.++.+++.+|.++ |+....+..+..+....+.+ . ++.+..++...+.|++.+..
T Consensus 229 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~-~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~g~~~g~~ 305 (375)
T TIGR00899 229 ELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGK-RRLMLLAALAGVAFYTGLAA-D-NSLWALLMLQLLNAIFIGIL 305 (375)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHHH
Confidence 888765544444334444556667788888888886 44445444332222222222 1 23444555566677777777
Q ss_pred HHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCC
Q 020432 211 MVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 211 ~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~ 259 (326)
.+...+...|..+++. +...|..+....+|..++..+.|.+.+..|
T Consensus 306 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 306 AGIGMLYFQDLMPGRA---GAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred HHHHHHHHHHhCcchh---hHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7777778888876533 345788888888999998888887654333
No 39
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.35 E-value=8.8e-11 Score=109.88 Aligned_cols=234 Identities=10% Similarity=0.094 Sum_probs=134.4
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCc
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNS 88 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~ 88 (326)
+++|.+..+.......+|..+...+...+.+.. ..+|++.-.+.+++.++.........||++. ++ +.
T Consensus 117 ~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~--------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 184 (355)
T TIGR00896 117 PQRVGLMTGLYSMALMGGAALAAAATVPLAQHS--------GGHWQQALAWWALPALLALLAWIPQVRRRVA---AN-QT 184 (355)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh--------hhhHHHHHHHHHHHHHHHHHHHhhhhccccC---CC-CC
Confidence 467888988888777777766555444443321 1236554444443333332222111122111 11 11
Q ss_pred chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 89 HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
+.+...++.+|||.++...+.+.+..........+.|.|+++ .|.++...+.......++.+++.++.+++.+|.++||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~ 263 (355)
T TIGR00896 185 TTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR 263 (355)
T ss_pred CCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch
Confidence 112345677899988766665666566666677889999986 4665554555555667788899999999988885445
Q ss_pred hhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 169 AYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
+....+..+..++.+.+.+.+.+. .. ....+.|+|.+...+...+.+.|..+..++ .|..++..+...-++.+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~gp 339 (355)
T TIGR00896 264 GIVAVLAVLQLVGLCGLLFAPMHG-LW--AWALVLGLGQGGAFPLALTLIGLRSRQAAQ-AAALSAMAQSIGYLLAALGP 339 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhH-HH--HHHHHHHHhhhhHhHHHHHHHHHhccCHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 555555555445544444443222 11 134567888888777777766665443222 24445555544555556777
Q ss_pred HhhhhcccCCC
Q 020432 249 YVLQSYQSMSP 259 (326)
Q Consensus 249 ~i~~~~l~~~~ 259 (326)
.+.|.+.+..|
T Consensus 340 ~~~G~l~~~~g 350 (355)
T TIGR00896 340 LFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHhc
Confidence 77777654443
No 40
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.34 E-value=1.8e-10 Score=109.28 Aligned_cols=227 Identities=11% Similarity=-0.029 Sum_probs=131.6
Q ss_pred cchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcc
Q 020432 10 TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSH 89 (326)
Q Consensus 10 ~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~ 89 (326)
+||.+.+++-..+..++..+...+...+. + ..||++...+.+++..+..+...+..+|+++++ +++.+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---------~-~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 195 (394)
T PRK11652 128 TQLRHANSLLNMGILVSPLLAPLIGGLLT---------T-LFGWRACYLFLLLLGAGVTFSMARWMPETRPAD--ARRTR 195 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------h-ccChHHHHHHHHHHHHHHHHHHHHhCCccCccc--cchhH
Confidence 45555555555454444443333222221 1 246776665655555544444444567754322 12223
Q ss_pred hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchh
Q 020432 90 ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKA 169 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~ 169 (326)
.++.++..+|||+++...+..+...........+.+.|+++.+|.++...+.+.....++.++++.+.+++.||.+| +.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~-~~ 274 (394)
T PRK11652 196 VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFST-LM 274 (394)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 56778899999998776655555555556666777888888888755444554445556677777888888776652 22
Q ss_pred hhhHhHHHHHHHHHHHh---hcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 170 YYSAGGVLWVFCGAGIL---ILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 170 ~~~~~~~l~~~~~~~l~---~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
..+......+...+. .....+.+......++.++|.+...+...+...|..++ ..|...+..+....++.++
T Consensus 275 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~lg~~~ 349 (394)
T PRK11652 275 --WQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY---LAGTAGALLGGLQNIGSGL 349 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---cchHHHHHHHHHHHHHHHH
Confidence 122111112212111 11122334455556677788877777777777776653 3366677888778888888
Q ss_pred HHHhhhhc
Q 020432 247 AVYVLQSY 254 (326)
Q Consensus 247 ~~~i~~~~ 254 (326)
++.+.+.+
T Consensus 350 ~~~~~~~~ 357 (394)
T PRK11652 350 AALLSAML 357 (394)
T ss_pred HHHHHHHc
Confidence 88777654
No 41
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.34 E-value=3.2e-10 Score=108.77 Aligned_cols=165 Identities=7% Similarity=-0.014 Sum_probs=105.2
Q ss_pred hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 91 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM---GQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 91 ~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~---~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
.++++..+|||+++...+...+...........++.|..+..+. +....+.+.....+...++.++++++.+|.++|
T Consensus 213 ~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~ 292 (420)
T PRK09528 213 LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK 292 (420)
T ss_pred HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 34567788999987655544444444444455677777665432 122334444455566678888999999998864
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh-hHHHHHHHhhH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT-LSFLDKMSCGI 246 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~-~sf~~Kl~~~i 246 (326)
+....+..+..+...++.+. ++++.+.....+.|++.+.........++|..+.+.+ +..++. +++..++|..+
T Consensus 293 -~~~~~~~~l~~~~~~l~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--a~~~~~~~~~~~~lg~~i 367 (420)
T PRK09528 293 -NALLLAGTIMAVRIIGSGFA--TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLS--ATIYLVGFQFAKQLGAVF 367 (420)
T ss_pred -hhhHHHHHHHHHHHHHHHhc--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccce--eeeeeehHHHHHHHHHHH
Confidence 44555555444443333332 3455555566677777777766777788888876655 444554 77889999999
Q ss_pred HHHhhhhcccCCCc
Q 020432 247 AVYVLQSYQSMSPT 260 (326)
Q Consensus 247 ~~~i~~~~l~~~~y 260 (326)
+..+.|++.+..||
T Consensus 368 g~~~~G~l~~~~G~ 381 (420)
T PRK09528 368 LSTLAGNLYDSIGF 381 (420)
T ss_pred HHHHHHHHHHhhCc
Confidence 99888887554444
No 42
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.33 E-value=5.2e-10 Score=108.00 Aligned_cols=241 Identities=8% Similarity=-0.029 Sum_probs=131.4
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc---C-
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G- 83 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~---~- 83 (326)
+++||.+.++....+..+|+.+...+...... + ..||+..-.+.+++.++..++..+..||+++.+ +
T Consensus 148 ~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~--------~-~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 218 (438)
T TIGR00712 148 SQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA--------W-FNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPI 218 (438)
T ss_pred CcccchhHHHHHHHHHHhHhHHHHHHHHHHHH--------H-hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCc
Confidence 57889999999887777776554333221111 1 136776655656665554444444456533210 0
Q ss_pred C-----------C--C-Ccchhhh-HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHH
Q 020432 84 L-----------R--G-NSHARIS-WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYI 148 (326)
Q Consensus 84 ~-----------~--~-~~~~~~~-l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i 148 (326)
+ + + +.+.++. .+..+||+.++...+..++..........+.|.|+++..|.++...........+
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 298 (438)
T TIGR00712 219 EEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEY 298 (438)
T ss_pred hhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHH
Confidence 0 0 0 0011111 2347899988877665566666666677899999998877655444455555667
Q ss_pred HHHHHHHHHHHHHHhcccchhhhhHhHHHHH--HHHHHHhhc-CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC
Q 020432 149 CSFIVSILLQEMAWTGQRLKAYYSAGGVLWV--FCGAGILIL-PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225 (326)
Q Consensus 149 ~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~--~~~~~l~~~-~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~ 225 (326)
..+++.++.+++.+|.+++|+.. .+..+.. +..+..+.. +..+...........|++.............|..+.+
T Consensus 299 ~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 377 (438)
T TIGR00712 299 AGIPGTLLCGWMSDKVFKGNRGA-TGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKK 377 (438)
T ss_pred HHHHHHHHHHHHHHHhccCcccH-HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChh
Confidence 78888899999987765333322 2222211 111222222 2223332222223334332222222234556766665
Q ss_pred CCCceEEEehhHHHHHHHh-hHHHHhhhhcccCCCc
Q 020432 226 LSGCAFVCGTLSFLDKMSC-GIAVYVLQSYQSMSPT 260 (326)
Q Consensus 226 ~r~~g~i~s~~sf~~Kl~~-~i~~~i~~~~l~~~~y 260 (326)
.| |...|.......++. .++..+.|.+.+..||
T Consensus 378 ~~--g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~ 411 (438)
T TIGR00712 378 AA--GTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW 411 (438)
T ss_pred he--eeehhhhchHHHhhhhhhcchhHHHHHHhccc
Confidence 55 667888877777764 5666777766544443
No 43
>PRK09952 shikimate transporter; Provisional
Probab=99.32 E-value=2.7e-10 Score=110.07 Aligned_cols=242 Identities=11% Similarity=0.059 Sum_probs=132.9
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC---C
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG---L 84 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~---~ 84 (326)
++++|.+.++....+..+|.++...+...+....+.. .....||+....+.++.+++..++ ....+|.++..+ +
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~--~~~~~gWr~~f~~~~~~~l~~~~l-~~~~~es~~~~~~~~~ 231 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDE--QFLSWGWRIPFLFSIVLVLIALWV-RNGMEESAEFEQQQHE 231 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HhhccChHHHHHHHHHHHHHHHHH-HHhCCCChhHHHHHhh
Confidence 4578999998888888888766554443333333210 011358887766655554433222 123344321100 0
Q ss_pred C-CCcchhhhHHHHhhchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH
Q 020432 85 R-GNSHARISWAYWFKKILYYQVA-LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW 162 (326)
Q Consensus 85 ~-~~~~~~~~l~~~~~N~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k 162 (326)
. ++.......+.+++||+.+... ...++..........+.+.|.++..|.+......+.....+..+++.++.+++.+
T Consensus 232 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~D 311 (438)
T PRK09952 232 QAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLAD 311 (438)
T ss_pred cccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000112234566777665543 3455555566667789999999888875443223333444556777788899999
Q ss_pred hcccchhhhhHhHHHHHHHHHHHhh-c-CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh-hHHH
Q 020432 163 TGQRLKAYYSAGGVLWVFCGAGILI-L-PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT-LSFL 239 (326)
Q Consensus 163 ~~gkkk~~~~~~~~l~~~~~~~l~~-~-~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~-~sf~ 239 (326)
|.+| |+.+..+.++..++...++. . ..+....+....++.+++.+......+++++|..|.+.|..|. +. +++.
T Consensus 312 r~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~--g~~~~~~ 388 (438)
T PRK09952 312 RFGR-RRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGA--GVGYQVA 388 (438)
T ss_pred HhCc-hHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHH--hHHHHHH
Confidence 9986 44555555443333222222 1 2222333333445557777777888899999999997764332 21 2233
Q ss_pred HHHHhhHHHHhhhhcc
Q 020432 240 DKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 240 ~Kl~~~i~~~i~~~~l 255 (326)
.-++.+++..+.+++.
T Consensus 389 ~~lgg~~~p~i~g~l~ 404 (438)
T PRK09952 389 SVVGGGFTPFIAAALV 404 (438)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3344445555666543
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=1e-10 Score=110.05 Aligned_cols=230 Identities=11% Similarity=-0.023 Sum_probs=135.0
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcc---c---
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK---M--- 82 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~---~--- 82 (326)
+++|.+..+....+..+|..+...+...+.+. .||+....+.+++..+..++..+..+|+... +
T Consensus 136 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (398)
T TIGR00895 136 KRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPV----------FGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPE 205 (398)
T ss_pred HHhhchhHhhHhhHHHHHHHHHHHHHHHHhhc----------ccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHH
Confidence 46889999988877777776655544333221 3455444444444433333333334443210 0
Q ss_pred ----------------------CCCCC-cchhhhHHHHhhchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 020432 83 ----------------------GLRGN-SHARISWAYWFKKIL---YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ 136 (326)
Q Consensus 83 ----------------------~~~~~-~~~~~~l~~~~~N~~---~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~ 136 (326)
+++++ ...++..+.+++++. .+...+.+.+..........+.|++ ....+.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~ 284 (398)
T TIGR00895 206 TVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKL-MVELGFSL 284 (398)
T ss_pred HHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCH
Confidence 00000 111222344444433 3333344445555555566777744 44556655
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHH
Q 020432 137 SAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGIS 216 (326)
Q Consensus 137 ~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~a 216 (326)
.....+.....++.+++.++.+++.+|.++ |..... ..+..+....+... .++....++..++.|++.+...+..++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 285 SLAATGGALFNFGGVIGSIIFGWLADRLGP-RVTALL-LLLGAVFAVLVGST-LFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcch-HHHHHH-HHHHHHHHHHHHHH-hhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555566677888999999999988885 433333 32222222222221 234455566677888998888999999
Q ss_pred HhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 217 MQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 217 m~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.++|.++++.| |...|..+...+++..++..+.|.+
T Consensus 362 ~~~~~~~~~~~--g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYPTAIR--ATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHhhcCCHHHH--HHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 99999988777 5567889999999999988887754
No 45
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.29 E-value=3.9e-10 Score=107.38 Aligned_cols=227 Identities=11% Similarity=0.011 Sum_probs=132.1
Q ss_pred cchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcc
Q 020432 10 TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSH 89 (326)
Q Consensus 10 ~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~ 89 (326)
+||.+.++....+...|..+...+.+.+.+.. .||+..-.++++..++.........+|+++++ ++++
T Consensus 128 ~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~---------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-- 195 (393)
T PRK09705 128 QRTPLVMGLWSAALMGGGGLGAAITPWLVQHS---------ETWYQTLAWWALPAVVALFAWWWQSAREVASS-HKTT-- 195 (393)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-cCCC--
Confidence 77888888888777777766655555444321 24554333333333222222222223322211 1111
Q ss_pred hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchh
Q 020432 90 ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKA 169 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~ 169 (326)
...++.+++++.+.....+.+..........+.|.|+++ .|.+............++.+++.++.+++.||.++ |+
T Consensus 196 --~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~-~~ 271 (393)
T PRK09705 196 --TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDR-RK 271 (393)
T ss_pred --cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccc-hH
Confidence 112345567777666666666666666777889999886 56655444555566778889999999999999885 45
Q ss_pred hhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHH
Q 020432 170 YYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVY 249 (326)
Q Consensus 170 ~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~ 249 (326)
....+..+..++...+...+++ .... ...+.|++.+...+..+++..|..+.++ +.|..++.......++..++..
T Consensus 272 ~~~~~~~l~~~~~~~~~~~~~~-~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~gp~ 347 (393)
T PRK09705 272 LLMLALVLQLVGFCGFIWLPLQ-LPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPA-IAGKLVAFMQGIGFIIAGLAPW 347 (393)
T ss_pred HHHHHHHHHHHHHHHHHHccch-HHHH--HHHHHHHhccchHHHHHHHHHhhcCCHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 5566555544444433333432 2222 2234566666666666666666664322 2255677877788888888888
Q ss_pred hhhhccc
Q 020432 250 VLQSYQS 256 (326)
Q Consensus 250 i~~~~l~ 256 (326)
+.|++.+
T Consensus 348 ~~G~l~~ 354 (393)
T PRK09705 348 FSGVLRS 354 (393)
T ss_pred HHHHHHH
Confidence 8887643
No 46
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.29 E-value=5.6e-10 Score=106.17 Aligned_cols=165 Identities=9% Similarity=0.020 Sum_probs=99.3
Q ss_pred hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 91 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM---GQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 91 ~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~---~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
.+++++++|||+++...+..++..........+++.|.+++.+. +....+.......+...++....+++.||.+|
T Consensus 205 ~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~- 283 (396)
T TIGR00882 205 LKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGA- 283 (396)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 35688899999987766555555555555556778888877642 11222333334455566677788889999886
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh-hHHHHHHHhhH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT-LSFLDKMSCGI 246 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~-~sf~~Kl~~~i 246 (326)
|+....+..+..+......+ . ++++.++...++.|++....+........+.. +.|.++..++. .++..|+|..+
T Consensus 284 ~~~l~~~~~l~~l~~~~~~~-~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~--~~~~~at~~~~~~~~~~~lg~~~ 359 (396)
T TIGR00882 284 KNALLIAGTIMSVRIIGSSF-A-TTALEVVILKMLHAFEVPFLLVGCFKYITSQF--DVRLSATIYLIGFQFAKQLAMIF 359 (396)
T ss_pred chhHHHHHHHHHHHHHHHHh-c-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcceEEEeehHHHHHHHHHHHHH
Confidence 45556655544443333222 2 34455555555666654333222222223333 34444666766 67899999999
Q ss_pred HHHhhhhcccCCCc
Q 020432 247 AVYVLQSYQSMSPT 260 (326)
Q Consensus 247 ~~~i~~~~l~~~~y 260 (326)
+..+.|++.+..||
T Consensus 360 ~~~l~G~l~~~~G~ 373 (396)
T TIGR00882 360 LSTLAGNMYDSIGF 373 (396)
T ss_pred HHHhHHHHHHhccc
Confidence 99999988665555
No 47
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.28 E-value=1.3e-09 Score=102.62 Aligned_cols=158 Identities=11% Similarity=-0.037 Sum_probs=101.4
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+++||.+..++...+..+|..+...+...+.+ ..||++.-.+.+++.++..+...+..+|+.+++ ++++
T Consensus 109 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 177 (377)
T PRK11102 109 PKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV----------WFSWHAIFWVLALAAILAAALVFFFIPETLPKE-RRQP 177 (377)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HcChHHHHHHHHHHHHHHHHHHHHhCCccCccc-ccCC
Confidence 56789999999988888777665444333322 246766655666665555544444566653322 1112
Q ss_pred cc---hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc
Q 020432 88 SH---ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 88 ~~---~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~ 164 (326)
.+ ..+.++..++||+++..++...+..........+.|+|+.+..|.++...+.+.....+..+++.++.+++.+|.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 257 (377)
T PRK11102 178 FHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV 257 (377)
T ss_pred CChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11 234667889999988766666666555555566677788777777655555555666777888888999999888
Q ss_pred ccchhhhhHhHHH
Q 020432 165 QRLKAYYSAGGVL 177 (326)
Q Consensus 165 gkkk~~~~~~~~l 177 (326)
|+ |+....+..+
T Consensus 258 g~-~~~~~~~~~~ 269 (377)
T PRK11102 258 GA-LNMLRFGLWI 269 (377)
T ss_pred CH-HHHHHHHHHH
Confidence 85 5555655544
No 48
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.27 E-value=7.8e-10 Score=118.93 Aligned_cols=237 Identities=12% Similarity=-0.046 Sum_probs=156.4
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~ 82 (326)
+++.+ +++|.+.+++.+....+|.++...+.-.+... .||++..+..++++++..+++ +..+|+..++
T Consensus 134 ~~~~~-~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~----------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 201 (1140)
T PRK06814 134 PDHLN-KDELLGANALVEAGTFIAILLGTIIGGLATIS----------GNFVILVALLMGIAVLGWLAS-LFIPKTGNAA 201 (1140)
T ss_pred HhhcC-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhc----------cccHHHHHHHHHHHHHHHHHH-hhCCCCCCCC
Confidence 34443 57899999999999999888776665544432 245544322233333333332 3345433211
Q ss_pred CC-CCC----cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHH
Q 020432 83 GL-RGN----SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILL 157 (326)
Q Consensus 83 ~~-~~~----~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~ 157 (326)
.. +.+ ......++.+++||.++...+.+++.+.......+++|.|+++.+|.++...+.+.....++.+++.++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~ 281 (1140)
T PRK06814 202 PDLKIDRNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLA 281 (1140)
T ss_pred CCCeeccchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111 1234568889999999988887888887777888899999999998866556666667778889999999
Q ss_pred HHHHHhcccchhhhhHhHHHHHHHHHHHhhc------------------CCcchhHHHHHHHHHhhHHHHHHHHHHHHhH
Q 020432 158 QEMAWTGQRLKAYYSAGGVLWVFCGAGILIL------------------PMNMSAFMYVLAIFVGIANALMMVTGISMQN 219 (326)
Q Consensus 158 ~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~------------------~~~~~~~~l~~~~~~g~g~~~~~~~~~am~a 219 (326)
+++.++..+++. ...+.++..++.+.+.+. ...+.+.+++..++.|++.+..+....+++.
T Consensus 282 g~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 360 (1140)
T PRK06814 282 SKLSEGRITLLY-VPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQ 360 (1140)
T ss_pred HHHhCCceeeee-ehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 998765443332 333333322222222221 1133455556667788888888888999999
Q ss_pred hhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 220 VLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 220 D~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+.++.+.+ |-++|.+++..-+++.++..+.+.+
T Consensus 361 ~~~p~~~~--G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 361 AWANPAHR--ARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred hhCCcccc--eeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 99998887 7789999999999888888777665
No 49
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.27 E-value=2.7e-09 Score=102.89 Aligned_cols=227 Identities=10% Similarity=0.031 Sum_probs=123.1
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
++++|.+..+....+...|.++...+...+....+.. .-...|||..-.+.++.+++..++ ....+|.+..+.+ +
T Consensus 154 p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~--~~~~~gWr~~F~i~~~~~ll~~~~-~~~~~e~~~~~~~--~ 228 (432)
T PRK10406 154 VEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA--ELREWGWRIPFALGAVLAVVALWL-RRQLDETSQQETR--A 228 (432)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--HHhccchHHHHHHHHHHHHHHHHH-HhcCCCCchHHHh--h
Confidence 3578998989888877777666554443433322110 001358988766655555544332 2234453221111 1
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYML-TRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~-~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
.+....+++++|||+.+.....+.+ ..........+.|.|+++..|.+............+..+++.++.+++.+|.+|
T Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~gr 308 (432)
T PRK10406 229 LKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGR 308 (432)
T ss_pred hcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 1112357888999988765554443 355566677889999988777654333333334444556667777888988886
Q ss_pred chhhhhHhHHHHHHHHHHHhh-cC-CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHH
Q 020432 167 LKAYYSAGGVLWVFCGAGILI-LP-MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKM 242 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~-~~-~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl 242 (326)
|| ....+.++..+....++. .. .++....+....+.+.+.+......++..+|..+.+.| |..+|.......+
T Consensus 309 r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r--~t~~g~~~~~g~~ 383 (432)
T PRK10406 309 RT-SMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVR--ALGVGLSYAVANA 383 (432)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcc--chhhhHHHHHHHH
Confidence 44 444433332222221211 11 12222222222222233334445677889999998888 4445665444443
No 50
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.27 E-value=6.6e-10 Score=105.45 Aligned_cols=238 Identities=9% Similarity=-0.057 Sum_probs=136.4
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+.++|...++.|..+..+|.++.......+.+ ..||+....+.+++..+..+...+ .+|+..++++ ++
T Consensus 127 ~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~----------~~gw~~~f~~~a~l~~~~~~~~~~-~~~~~~~~~~-~~ 194 (390)
T TIGR02718 127 NGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG----------KFGQRPAFLLVACVPLASLVCVLW-LKDRAVASPE-AP 194 (390)
T ss_pred CHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH----------HhCHHHHHHHHHHHHHHHHHHHHH-cCCCCcCccc-cc
Confidence 34455667777877777777665543333332 235666555566555544444333 3333221111 11
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH-HHHHHHHHHHHHHHHhccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY-ICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~-i~~~i~~~~~~~l~k~~gk 166 (326)
....+++++.+|||+++......++..........+.+.|.++ .|.+++..+....... ...+++.++.+++.||+|+
T Consensus 195 ~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~ 273 (390)
T TIGR02718 195 LARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGL 273 (390)
T ss_pred hhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhH
Confidence 1223467889999998877777777777677777788888877 5776655555443332 3556777888999988886
Q ss_pred chhhhhHhHHHHHHHHHHHhhcC----CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILP----MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKM 242 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~----~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl 242 (326)
|+....+..+..+....+.... ..+....+....+.+++.+......++...+..+++ |..|..++..+....+
T Consensus 274 -~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l 351 (390)
T TIGR02718 274 -WRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG-DQAGTDVTAVQSTRDL 351 (390)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-cchHHHHHHHHHHHHH
Confidence 4444544433322222222111 112222333334445556666665666655555442 2236668888888899
Q ss_pred HhhHHHHhhhhcccCCCc
Q 020432 243 SCGIAVYVLQSYQSMSPT 260 (326)
Q Consensus 243 ~~~i~~~i~~~~l~~~~y 260 (326)
+..++..+.|.+.+..||
T Consensus 352 g~~~g~~~~G~l~~~~G~ 369 (390)
T TIGR02718 352 GELIASSIAGYLTDRFGY 369 (390)
T ss_pred HHHHHHHHHHHHHHHHcc
Confidence 998888888876544443
No 51
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.26 E-value=2.4e-10 Score=105.24 Aligned_cols=213 Identities=12% Similarity=0.098 Sum_probs=150.4
Q ss_pred cccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC
Q 020432 4 CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG 83 (326)
Q Consensus 4 ~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~ 83 (326)
|..++ |||.+..++......+|..+...+...+.+. .+|+..-.+.+++.++..+...+ .+
T Consensus 114 ~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~-~~------- 174 (352)
T cd06174 114 EWFPP-KERGRALGLFSAGFGLGALLGPLLGGLLAES----------LGWRWLFLILAILGLLLALLLLF-LL------- 174 (352)
T ss_pred HhCCc-cchhhhhhHHHHHHHHHHHHHHHHHHHHHHH----------hhHHHHHHHHHHHHHHHHHHHHH-HH-------
Confidence 44444 8999999999998888887776655544432 23444433444433333332211 11
Q ss_pred CCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 84 LRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 84 ~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
|.++...+..++..........+.+.|.++..|.++...+.......+..+++.++.+++.+|
T Consensus 175 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 237 (352)
T cd06174 175 -----------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDR 237 (352)
T ss_pred -----------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566666667777777778888899999988767655555666667778889999999999988
Q ss_pred cccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHH
Q 020432 164 GQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMS 243 (326)
Q Consensus 164 ~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~ 243 (326)
.++|+..+..+..+..++...+.+.+ +.+...+...+.|++.+...+...+++.|.+|+++| |..+|..+....++
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 313 (352)
T cd06174 238 LGRRRLLLLIGLLLAALGLLLLALAP--SLALLLVALLLLGFGLGFAFPALLTLASELAPPEAR--GTASGLFNTFGSLG 313 (352)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHH--HHHHHHHHHHHHHH
Confidence 88543156666655555554444432 355666777888999998999999999999998666 66789999999999
Q ss_pred hhHHHHhhhhccc
Q 020432 244 CGIAVYVLQSYQS 256 (326)
Q Consensus 244 ~~i~~~i~~~~l~ 256 (326)
..++..+.+...+
T Consensus 314 ~~i~~~i~g~l~~ 326 (352)
T cd06174 314 GALGPLLAGLLLD 326 (352)
T ss_pred HHHHHHHHHHHhc
Confidence 9999998887644
No 52
>PRK15075 citrate-proton symporter; Provisional
Probab=99.25 E-value=2.2e-09 Score=103.59 Aligned_cols=246 Identities=12% Similarity=0.054 Sum_probs=130.0
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
++++|.+..++...+..+|..+...+...+........ .+ ..||++.-.+.++.. ..........+|.....+++++
T Consensus 147 p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~-~~-~~gWr~~f~~~~~~~-~~~~~~~~~~~e~~~~~~~~~~ 223 (434)
T PRK15075 147 TPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQ-MA-EWGWRIPFLIGCLIV-PFIFLIRRSLEETEEFLARKHR 223 (434)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH-Hh-ccchHHHHHHHHHHH-HHHHHHHHhcCCCHHHHHhhhc
Confidence 46899999998887777776554444433332221000 01 357887554322222 2111111122332110011111
Q ss_pred cchhhhHHHHhhchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 88 SHARISWAYWFKKILYYQVA-LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
.+.++.++...+|++.+... ....+..........+.|.|++++.|.++...........++.+++.++.+++.+|.+|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~ 303 (434)
T PRK15075 224 PSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGR 303 (434)
T ss_pred cccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22334466667776654432 33344455556677889999999888764433444445566778888889999988886
Q ss_pred chhhhhHhHHHHHHHHH-HHhhc-CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh-hHHHHHHH
Q 020432 167 LKAYYSAGGVLWVFCGA-GILIL-PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT-LSFLDKMS 243 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~-~l~~~-~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~-~sf~~Kl~ 243 (326)
|+....+..+..+... .+... ...+.........+.+++.+......+.+.+|..+.+.|..+ .+. +++..=++
T Consensus 304 -r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~--~g~~~~~~~~~~ 380 (434)
T PRK15075 304 -RPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAG--FSLAYSLATAIF 380 (434)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchh--eeHHHHHHHHHH
Confidence 4444444333222111 11122 222222233334455667766677777889999998887544 344 23332233
Q ss_pred hhHHHHhhhhcccCCC
Q 020432 244 CGIAVYVLQSYQSMSP 259 (326)
Q Consensus 244 ~~i~~~i~~~~l~~~~ 259 (326)
.+++..+.+++.+..|
T Consensus 381 g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 381 GGFTPAISTWLIHVTG 396 (434)
T ss_pred hhhHHHHHHHHHHhcC
Confidence 4556666666544333
No 53
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.25 E-value=2.4e-09 Score=101.85 Aligned_cols=221 Identities=10% Similarity=0.007 Sum_probs=123.8
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcchhhh
Q 020432 14 VLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARIS 93 (326)
Q Consensus 14 ~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~~~~~ 93 (326)
..++++..+..+|.++...+...+.+ ..||+..-.+.++++++..+.+.+..||.+++++++ +. .
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~----------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~ 207 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAM----------GFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLA-TG----T 207 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHH----------hcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccc-cc----c
Confidence 34566666667776655444333322 246776655666666665555555567653322111 11 1
Q ss_pred HHHHhhchh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 94 WAYWFKKIL-YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 94 l~~~~~N~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
.+...+|++ .+.......+.+........+.|.|.++.+|.++...+.+.....+..+++.++.+++.+|+++| +...
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-~~~~ 286 (393)
T PRK15011 208 LEAPRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-FLMR 286 (393)
T ss_pred ccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-HHHH
Confidence 122223433 33333333444444444566788899888887655445444445566677888999999888864 4445
Q ss_pred HhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 173 AGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 173 ~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.+.....+....+ ... ++.+..++...+.+++.+......++...|..++ ++ |...+.++...++|..++..+.|
T Consensus 287 ~~~~~~~~~~~~~-~~~-~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~--g~~~~~~~~~~~lg~~~g~~l~G 361 (393)
T PRK15011 287 VAAVAGVCFYAGM-LMA-HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QA--GSATTLYTNTSRVGWIIAGSLAG 361 (393)
T ss_pred HHHHHHHHHHHHH-HHH-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-Cc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 4443322222222 222 3344444444445555555555555666777764 33 56678877788899888888877
Q ss_pred hcc
Q 020432 253 SYQ 255 (326)
Q Consensus 253 ~~l 255 (326)
.+.
T Consensus 362 ~i~ 364 (393)
T PRK15011 362 IVA 364 (393)
T ss_pred HHH
Confidence 653
No 54
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.23 E-value=1.1e-09 Score=103.80 Aligned_cols=157 Identities=11% Similarity=-0.004 Sum_probs=108.4
Q ss_pred hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhh
Q 020432 91 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAY 170 (326)
Q Consensus 91 ~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~ 170 (326)
.+++++++|||+++...+..++.+........+.+.|.++ .|.++...+.......++.+++.++++++.||++. |+.
T Consensus 195 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~-~~~ 272 (382)
T TIGR00902 195 DSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSA-RDL 272 (382)
T ss_pred chhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCH-HHH
Confidence 3467889999999988888888888888888899999976 67766555655556677788888889899888885 555
Q ss_pred hhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhH-HHHHHHhhHHHH
Q 020432 171 YSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLS-FLDKMSCGIAVY 249 (326)
Q Consensus 171 ~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~s-f~~Kl~~~i~~~ 249 (326)
...+.+...+....+.+ .++.+.+++..++.|+..+.........+.|. +++.+ +...+.++ ...-+|..++..
T Consensus 273 l~~~~~~~~~~~~~~~~--~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~--~~~q~~~~~~~~g~g~~~g~~ 347 (382)
T TIGR00902 273 LLISAIACVGRWAIIGA--IEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEI--AKLQALYNALAMGGLIAIFTA 347 (382)
T ss_pred HHHHHHHHHHHHHHHHh--HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhH--HHHHHHHHHHHHHHHHHHHHH
Confidence 66666554444333322 34556777788899999888887777777776 55444 33344433 333455555666
Q ss_pred hhhhc
Q 020432 250 VLQSY 254 (326)
Q Consensus 250 i~~~~ 254 (326)
+.|++
T Consensus 348 ~~G~l 352 (382)
T TIGR00902 348 FAGFI 352 (382)
T ss_pred HHHHH
Confidence 66655
No 55
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.21 E-value=2.3e-09 Score=102.44 Aligned_cols=229 Identities=9% Similarity=-0.060 Sum_probs=130.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
++|+|.+..++-.....+|..+...+...+.. .||++.-.+.+++.++..++..+..+|+..+ +++
T Consensus 129 ~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-----------~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~---~~~ 194 (400)
T PRK11646 129 RPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-----------YDFRLVCATGAVLFVLAAAFNAWLLPAYKLS---TVR 194 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hhHHHHHHHHHHHHHHHHHHHHHhCCccccc---ccc
Confidence 36789998888877777777665544433321 2555544444444443333322333443221 112
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHH-HHHhccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQE-MAWTGQR 166 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~-l~k~~gk 166 (326)
.+.++.++..++||+++......+...........+.|+|.++..+. +...+.+.....+....+.....+ ..||.+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~ 273 (400)
T PRK11646 195 TPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGS-PSAVKWMYAIEACLSLTLLYPIARWSEKRFRL 273 (400)
T ss_pred hhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 23456788899999987655444433333333456789999887653 333333333333333332322333 3455543
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
++....+..+..++...+.+ . ++.+.+.+...+.+.|.+...+...++..|.++++.| |..+|.+++..-++..+
T Consensus 274 -~~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~--g~~~g~~~~~~~~g~~i 348 (400)
T PRK11646 274 -EHRLMAGLLIMSLSMFPIGM-V-SNLQQLFTLICLFYIGSIIAEPARETLSASLADARAR--GSYMGFSRLGLALGGAI 348 (400)
T ss_pred -hHHHHHHHHHHHHHHHHHHH-h-hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccc--hhhhhHHHHHHHHHHHh
Confidence 33344444443333333322 2 2334444455566777776777777888899988777 66789999999999988
Q ss_pred HHHhhhhccc
Q 020432 247 AVYVLQSYQS 256 (326)
Q Consensus 247 ~~~i~~~~l~ 256 (326)
|..+.|++.+
T Consensus 349 g~~l~G~l~~ 358 (400)
T PRK11646 349 GYIGGGWLFD 358 (400)
T ss_pred cccchHHHHH
Confidence 8888887643
No 56
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.21 E-value=1.4e-09 Score=106.36 Aligned_cols=234 Identities=10% Similarity=0.005 Sum_probs=124.7
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc--C--
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM--G-- 83 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~--~-- 83 (326)
++++|.+.++.-..+..+|..+...+.+.+.......+ .+...||++.-.+.++++++..+..++..+++++.+ +
T Consensus 153 ~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~-~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~ 231 (476)
T PLN00028 153 NGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAG-APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELK 231 (476)
T ss_pred ChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHH
Confidence 35688888888776666666555444443333221000 111258998888888777666555444334322111 0
Q ss_pred ---CCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHH
Q 020432 84 ---LRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM 160 (326)
Q Consensus 84 ---~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l 160 (326)
+.++.+..+.+++.++|++++.+.+.+++..........+.|.|+....|.++.....+.....++.+++.++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~l 311 (476)
T PLN00028 232 KSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYL 311 (476)
T ss_pred hcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 00112234567778899998776666665555545556778888877777755444444545566777777777777
Q ss_pred HHhcccc----hhhhhHhHHHHHHHHH-HHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh
Q 020432 161 AWTGQRL----KAYYSAGGVLWVFCGA-GILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT 235 (326)
Q Consensus 161 ~k~~gkk----k~~~~~~~~l~~~~~~-~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~ 235 (326)
+.|.+|| ++........ .+..+ .+.+...++.....+..++.+++.+......+++.+|..+ |..|..++.
T Consensus 312 sDr~~~r~~~~~r~~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~---~~~g~~~g~ 387 (476)
T PLN00028 312 SDVAARRFGMRGRLWALWIVQ-TLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPFVSR---RSLGVISGL 387 (476)
T ss_pred HHHHHHhcCcchhHHHHHHHH-HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcccCh---hhchhhhhh
Confidence 7655532 1111211111 11211 1121112233333444455566665666667777776533 233666666
Q ss_pred hHHHHHHHhhH
Q 020432 236 LSFLDKMSCGI 246 (326)
Q Consensus 236 ~sf~~Kl~~~i 246 (326)
.....-+|..+
T Consensus 388 ~~~~g~lg~~i 398 (476)
T PLN00028 388 TGAGGNVGAVL 398 (476)
T ss_pred hhccccHHHHH
Confidence 54443333333
No 57
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.21 E-value=3.1e-09 Score=104.23 Aligned_cols=239 Identities=10% Similarity=0.096 Sum_probs=130.1
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc---C--
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM---G-- 83 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~---~-- 83 (326)
+++|.+..++-..+..+|..+...+...+....+.. .....||++...+.++++++..++ ....+|.+... +
T Consensus 149 ~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~--~~~~~gWR~~f~i~~~~~l~~~~~-~~~~~esp~~~~~~~~~ 225 (490)
T PRK10642 149 DRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEA--NFLDWGWRIPFFIALPLGIIGLYL-RHALEETPAFQQHVDKL 225 (490)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH--HhcCccHHHHHHHHHHHHHHHHHH-HHcCCCChhHHHHHHhh
Confidence 478888888887777777666554443333322210 011358998776655444443333 33466643210 0
Q ss_pred -CCCC----cchhhhHHHHhhc-h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHH
Q 020432 84 -LRGN----SHARISWAYWFKK-I-LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSIL 156 (326)
Q Consensus 84 -~~~~----~~~~~~l~~~~~N-~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~ 156 (326)
++++ ...+..++.++++ + ++.......++..........+.|.|+++..|.++...........++.+++.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~ 305 (490)
T PRK10642 226 EQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPV 305 (490)
T ss_pred hhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 0112245666653 2 2222223334445556667789999998887875433333334455667788888
Q ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHH-HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh
Q 020432 157 LQEMAWTGQRLKAYYSAGGVLWVFCGAG-ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT 235 (326)
Q Consensus 157 ~~~l~k~~gkkk~~~~~~~~l~~~~~~~-l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~ 235 (326)
.+++++|.|| |+.+..+.++..+.... +......+...+++..++.|++.+.......+.++|..+.+.|..+ .|.
T Consensus 306 ~g~l~dr~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~--~g~ 382 (490)
T PRK10642 306 MGLLSDRFGR-RPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSA--LAA 382 (490)
T ss_pred HHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHH--HHH
Confidence 8999999886 44555555432222222 2222223333444445556666666666777888898888777433 343
Q ss_pred -hHHHHHHHhhHHHHhhhhc
Q 020432 236 -LSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 236 -~sf~~Kl~~~i~~~i~~~~ 254 (326)
+++ ..++.+++..+.+++
T Consensus 383 ~~~~-~~~~g~~~p~i~g~l 401 (490)
T PRK10642 383 AFNI-SVLVAGLTPTLAAWL 401 (490)
T ss_pred HHHH-HHHHHHHHHHHHHHH
Confidence 444 334445666666654
No 58
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.20 E-value=1.1e-09 Score=104.89 Aligned_cols=231 Identities=10% Similarity=-0.009 Sum_probs=125.0
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcc---c--
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK---M-- 82 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~---~-- 82 (326)
++++|.+.+++...+..+|.++...+...+. + ..||++...+.+ +..+..+......+|+... +
T Consensus 136 ~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~---------~-~~~w~~~f~i~~-~~~~~~~~~~~~~p~~~~~~~~~~~ 204 (426)
T PRK12307 136 PKHLKSKASAFLVSGFGIGNIIAAYFMPSFA---------E-AYGWRAAFFVGL-LPVLLVIYIRARAPESKEWEEAKLS 204 (426)
T ss_pred CHhHhhHhhhHHHHHHhHHHHHHHHHHHHHc---------c-cCCHHHHHHHHH-HHHHHHHHHHHHCCCChHHHHhhhh
Confidence 4678999999988887777765543332221 1 246766544322 2222222111112232110 0
Q ss_pred CCCCC-c----chhhhHHHHhhchhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHH
Q 020432 83 GLRGN-S----HARISWAYWFKKILYYQVALVYMLTRL---VVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVS 154 (326)
Q Consensus 83 ~~~~~-~----~~~~~l~~~~~N~~~~~~~~~~~~~~~---~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~ 154 (326)
+++++ . .....++.++||+.++.....+..... .......++|.|+++. |.++...+.......++.+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~ 283 (426)
T PRK12307 205 GKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGN 283 (426)
T ss_pred ccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHH
Confidence 00000 0 012357888999888654433332222 2223456788888764 6544444444455567788888
Q ss_pred HHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhH--HHHHHHHHHHHhHhhhcCCCCCceEE
Q 020432 155 ILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIA--NALMMVTGISMQNVLVGEDLSGCAFV 232 (326)
Q Consensus 155 ~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g--~~~~~~~~~am~aD~id~~~r~~g~i 232 (326)
++++++.+|.++ |+....+.++..+....+...+.+... .+..++.|.+ ..+.....+++++|..+.+.| |..
T Consensus 284 ~~~g~l~dr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--g~~ 358 (426)
T PRK12307 284 IVWGLCADRIGL-KKTFSIGLLMSFLFIFPLFRIPQDNYL--LLGACLFGLMATNVGVGGLVPKFLYDYFPLEVR--GLG 358 (426)
T ss_pred HHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHccccHH--HHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHH--hhh
Confidence 999999988885 555566554433333333333322221 1222233322 222234556778888887666 556
Q ss_pred EehhHHHHHHHhhHHHHhhhhcc
Q 020432 233 CGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 233 ~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
.|......+++..++..+.|++.
T Consensus 359 ~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 359 TGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHH
Confidence 77777788888777777777653
No 59
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.20 E-value=2.1e-09 Score=105.90 Aligned_cols=235 Identities=14% Similarity=0.037 Sum_probs=149.3
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~ 82 (326)
|++-+ .||-.+.++......+++.++...++-.++...|. ...|..-++.+ +..+.+....|++..++
T Consensus 129 p~lV~-~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~------~~~f~inalsf-----l~~i~~l~~~~~~~~~~ 196 (524)
T PF05977_consen 129 PELVP-KEDLPAANALNSISFNIARIIGPALGGILVAFFGA------AAAFLINALSF-----LISILALLRWKPPPPPS 196 (524)
T ss_pred HHhcc-HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHH------HHHHHHHHHHH-----HHHHHHHHHcccccccc
Confidence 44433 35566667777766666666665555444444331 11222222222 22222222334322211
Q ss_pred CC-CCC--cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHH
Q 020432 83 GL-RGN--SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQE 159 (326)
Q Consensus 83 ~~-~~~--~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~ 159 (326)
+. +++ ..+++.+|.+.+||..+..+...++..+......+.+|+|.++.+|.++..++.+.....++.++++++.++
T Consensus 197 ~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~ 276 (524)
T PF05977_consen 197 SLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPR 276 (524)
T ss_pred ccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111 245667888888998877665555555555556678999999999987777788888888999999999999
Q ss_pred HHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHH
Q 020432 160 MAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFL 239 (326)
Q Consensus 160 l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~ 239 (326)
+.|+.++ ++....+.++.+++.+.+.+. .+.+..++..++.|.+....+....+.+...++++.| |=++|.+...
T Consensus 277 l~~~~~~-~~lv~~~~~~~a~~~~~lal~--~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~--GRv~si~~~~ 351 (524)
T PF05977_consen 277 LRRRLSS-RRLVLLASLLFALALLLLALS--PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVR--GRVFSIYQMV 351 (524)
T ss_pred hhcccCc-chhhHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--hHHHHHHHHH
Confidence 9888764 445555555544443333332 3445566667778888888888888889999988777 3357888888
Q ss_pred HHHHhhHHHHhhhhc
Q 020432 240 DKMSCGIAVYVLQSY 254 (326)
Q Consensus 240 ~Kl~~~i~~~i~~~~ 254 (326)
.-.++.+|..+.|.+
T Consensus 352 ~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFL 366 (524)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888888888865
No 60
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.19 E-value=2.2e-09 Score=104.37 Aligned_cols=234 Identities=11% Similarity=0.052 Sum_probs=134.9
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCC---
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL--- 84 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~--- 84 (326)
+++||.+.+++...+..+|..+...+...+... ..||+....+.++++++..++.++..+|++..++.
T Consensus 161 ~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~---------~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 231 (465)
T TIGR00894 161 PPKERSRLLGMSTSGFQLGTFIFLPISGWLCES---------WGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISK 231 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------cCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCH
Confidence 468999999999888888877655443333211 12677766667776666655555445543321100
Q ss_pred -----------CC--CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHH
Q 020432 85 -----------RG--NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 151 (326)
Q Consensus 85 -----------~~--~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~ 151 (326)
++ +.+.+..++++++|++++...+.+++..........++|.|++++.|.+....+.......++.+
T Consensus 232 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~ 311 (465)
T TIGR00894 232 FEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAW 311 (465)
T ss_pred HHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHH
Confidence 00 11123358899999999988888888888888888999999999988765444444445566777
Q ss_pred HHHHHHHHHHHhcccchhh-------hhHhHHHHHHHHHHHhhcC--CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhh
Q 020432 152 IVSILLQEMAWTGQRLKAY-------YSAGGVLWVFCGAGILILP--MNMSAFMYVLAIFVGIANALMMVTGISMQNVLV 222 (326)
Q Consensus 152 i~~~~~~~l~k~~gkkk~~-------~~~~~~l~~~~~~~l~~~~--~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~i 222 (326)
++.++.+++.+|.++||.. ...+......+ ...+..+ ..+....++...+.+.+.+......++..+|..
T Consensus 312 i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 390 (465)
T TIGR00894 312 LCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPG-IFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLA 390 (465)
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHH-HHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcC
Confidence 7778888877554322211 11111111111 1111111 122333333333344444444445555555554
Q ss_pred cCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 223 GEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 223 d~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+. ..|...++.++..-++..+++.+.+.+
T Consensus 391 ~~---~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 391 PR---FLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred hh---HHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 33 347777777777777766776666654
No 61
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.19 E-value=2.8e-09 Score=100.93 Aligned_cols=227 Identities=8% Similarity=-0.091 Sum_probs=123.5
Q ss_pred cchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC-CCCCc
Q 020432 10 TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG-LRGNS 88 (326)
Q Consensus 10 ~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~-~~~~~ 88 (326)
+||.+-.+....+..+|..+...+.-.+.+. .||+..-.+.++..++..+ +.+..+|+..+.+ ++++.
T Consensus 124 ~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~----------~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 192 (382)
T PRK11128 124 KQIGLDYGKVRLWGSIAFVIGSALTGKLVSW----------FGEQAILWILTAGVASMLL-GQLLRPTIMPQGESRQQES 192 (382)
T ss_pred hhccCCcchHHHHHHHHHHHHHHHHHHHHHH----------cChhHHHHHHHHHHHHHHH-HHHccCCCCCccccccccc
Confidence 4566655655666666655544444333322 3555443333332222222 2223344321111 11111
Q ss_pred chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 89 HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
+..+.+++++|||+++...+..++..........+.+.|..+ .|.++...+.+.....+..++..++.+++.||.++ |
T Consensus 193 ~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~-~ 270 (382)
T PRK11128 193 AGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSA-R 270 (382)
T ss_pred cccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-H
Confidence 124578999999999887776777766666667778888764 56554444554445556677777888888888875 5
Q ss_pred hhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhH-HHHHHHhhHH
Q 020432 169 AYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLS-FLDKMSCGIA 247 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~s-f~~Kl~~~i~ 247 (326)
+....+.+...+....+.+ . ++++.+++..++.|++.+...........+. +++++ |...+..+ +..-+|.++|
T Consensus 271 ~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~g~~ig 345 (382)
T PRK11128 271 DLLLLSAICGVVRWGLMGS-T-TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEV--IRLQALYSALAMGGSIAIM 345 (382)
T ss_pred HHHHHHHHHHHHHHHHHHh-h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhh--HHHHHHHHHHHHHHHHHHH
Confidence 5555555544443332222 2 4556666677777887776655544444443 33333 33355544 3333444566
Q ss_pred HHhhhhc
Q 020432 248 VYVLQSY 254 (326)
Q Consensus 248 ~~i~~~~ 254 (326)
..+.|.+
T Consensus 346 ~~i~G~l 352 (382)
T PRK11128 346 TVLSGFL 352 (382)
T ss_pred HHHHHHH
Confidence 6666655
No 62
>PRK03699 putative transporter; Provisional
Probab=99.19 E-value=5.1e-09 Score=99.61 Aligned_cols=151 Identities=7% Similarity=-0.013 Sum_probs=93.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
+++++...+.+++..........+.|.|.++..|.++...+.+.....++..++.++.+++.||+++ |+.......+..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~-~~~l~~~~~~~~ 282 (394)
T PRK03699 204 GIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDL-QRILTVLAGLAL 282 (394)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhch-hhHHHHHHHHHH
Confidence 4555555555555555556677899999988888765545555555566778888999999988886 444444343333
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhccc
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQS 256 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~ 256 (326)
+...++. .. ++.....+...+.|++.+...+...+..+|..+.+. +...+.......+|..++..+.|.+.+
T Consensus 283 ~~~~~~~-~~-~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 283 VLMYLFV-NT-DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVAS---PKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHH-Hc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC---HHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 3222222 22 334444455566677766666666666777655332 223455555666777777777776643
No 63
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.19 E-value=1.9e-09 Score=103.35 Aligned_cols=242 Identities=7% Similarity=-0.023 Sum_probs=138.7
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc----C
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM----G 83 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~----~ 83 (326)
+++||.+..+.-..+..+|..+...+...+....+ ..+ ..||++...+.++.+++...+.++..||+++++ +
T Consensus 126 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~---~~~-~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~ 201 (412)
T TIGR02332 126 PAYFRARANALFMIAMPVTMALGLILSGYILALDG---LMA-LKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDE 201 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCC-ccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCH
Confidence 35689999888887777777766555433332110 012 358998888877777766666666677754211 0
Q ss_pred CC------------------C----C--cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCccc
Q 020432 84 LR------------------G----N--SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND-LRMGQSA 138 (326)
Q Consensus 84 ~~------------------~----~--~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~-l~~~~~~ 138 (326)
++ + + ...++.++.++ +++++...+.+++..........+.|.|+++. .+.++..
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~ 280 (412)
T TIGR02332 202 EDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIM 280 (412)
T ss_pred HHHHHHHHHHHhccccccccccccccccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH
Confidence 00 0 0 00012345555 57777777777777777778889999999772 3433333
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 139 KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 139 ~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
.........++.+++.++.+++++|.++||........+..++..+.. .. ++....+....+.++|........+...
T Consensus 281 ~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 358 (412)
T TIGR02332 281 IGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLAS-AT-DHNLIQLLGIIMASMGSFSAMAIFWTTP 358 (412)
T ss_pred hHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHH-hc-CCHHHHHHHHHHHHHHhhhhhhHHHhhc
Confidence 344455666778888899999998877544333333323222222121 12 2222222222223333333333344444
Q ss_pred HhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCC
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMS 258 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~ 258 (326)
.|..+.+.| |..+|..+....+|..++..+.+...+..
T Consensus 359 ~~~~~~~~~--~~a~g~~~~~~~~g~~~~p~~~g~i~~~~ 396 (412)
T TIGR02332 359 DQSISLQAR--AIAIAVINATGNIGSALSPFLIGILKDAT 396 (412)
T ss_pred ccccchHHH--HHHHHHHHHhhhhhhhhhhhhcccccccC
Confidence 444444444 66688999999999999988888765544
No 64
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.18 E-value=6.5e-09 Score=98.73 Aligned_cols=222 Identities=8% Similarity=-0.038 Sum_probs=122.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+++||.+.+++......+|..+...+...+.+ ..||+....+.++++++..+.. ...+|+. +.++++
T Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~ 208 (399)
T PRK05122 142 GALHTGRVISWNGIATYGALAIGAPLGVLLYH----------WGGLAGLGLLIMLLALLGLLLA-RPRPAVP--PVKGER 208 (399)
T ss_pred ChhhhccchhhhhhhhhHHHHHHHHHHHHHHH----------cccHHHHHHHHHHHHHHHHHHH-hcCCCCC--CCCccc
Confidence 57889999998877777766555444433332 1356665544444444333322 1122211 111111
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
. ++++.+|+ .+.....+.+..........+.+.|.++ .+... .........++.+++.++.+++.+|.++
T Consensus 209 ~----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~~~- 278 (399)
T PRK05122 209 L----PFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGWDG--AALALTLFGVAFVGARLLFGNLINRLGG- 278 (399)
T ss_pred h----hHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccccc--chHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence 1 23333332 1111222333334444455666766654 23211 2222334456667778888899888775
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
|+....+..+..++...+.+. ++.+..++..++.|++.+...+...+...|..+++.| |..+|.++...+++.+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~~~ 354 (399)
T PRK05122 279 LRVAIVSLLVEILGLLLLWLA--PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNR--GAALGAYSVFLDLSLGIT 354 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHH
Confidence 445555554444444333332 2344455566778888877666555556666655555 667899999999999998
Q ss_pred HHhhhhccc
Q 020432 248 VYVLQSYQS 256 (326)
Q Consensus 248 ~~i~~~~l~ 256 (326)
..+.|.+.+
T Consensus 355 ~~~~g~l~~ 363 (399)
T PRK05122 355 GPLAGLVAS 363 (399)
T ss_pred HHHHHHHHH
Confidence 888776543
No 65
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.18 E-value=5.8e-09 Score=99.44 Aligned_cols=230 Identities=10% Similarity=-0.029 Sum_probs=132.6
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
+++||.+..+.-.....+|..+...+...+.+ ..||++.-.+.+++++++.+......+|.+.++
T Consensus 138 ~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~----------~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~----- 202 (394)
T PRK10213 138 PPRTVPKALSVIFGAVSIALVIAAPLGSFLGE----------LIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP----- 202 (394)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hcCHHHHHHHHHHHHHHHHHHHHHHCCCCCccc-----
Confidence 46778888888777667776555444433322 246776666666555554444333345532211
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYL-AFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~-~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
.+..+..+..+|||+++......++..........+. |+|. ...|.+++..........++.+++..+.+++.||.+
T Consensus 203 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~- 280 (394)
T PRK10213 203 SHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSV- 280 (394)
T ss_pred ccchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 1112345677889998776555555555444445665 6665 455765544455555566678888888888887754
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
|+. ...+..+.......+.... ++.+.+.+...+.|++.+.......+.+...++++. +...+......-++..+
T Consensus 281 ~~~-l~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~lg~~~ 355 (394)
T PRK10213 281 KLA-LAGAPLVLAVSALVLTLWG-SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQA---EKAGSIQVAVIQLANTC 355 (394)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccH---HHHHHHHHHHHHHHHHH
Confidence 233 3333333233323332233 334555566777888887777777767777676432 22344555566677788
Q ss_pred HHHhhhhcccCCC
Q 020432 247 AVYVLQSYQSMSP 259 (326)
Q Consensus 247 ~~~i~~~~l~~~~ 259 (326)
|..+.|.+.+..|
T Consensus 356 G~~l~G~l~~~~g 368 (394)
T PRK10213 356 GAAIGGYALDNIG 368 (394)
T ss_pred HHHHHHHHHhccC
Confidence 8888887654333
No 66
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.17 E-value=3.6e-09 Score=99.02 Aligned_cols=236 Identities=11% Similarity=-0.009 Sum_probs=145.0
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc------
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM------ 82 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~------ 82 (326)
.+||-+--+.=...-++|+.+...++.+ ..+. + ..+|+.....=|+++++..+++++..|+|++..
T Consensus 148 r~eRG~~~siWn~shNiGGal~~~~~~l--a~~~-----~-~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie 219 (448)
T COG2271 148 RKERGTWWSIWNTSHNIGGALAPLVALL--AFFA-----F-HGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIE 219 (448)
T ss_pred ccccCceEEEehhhhhcccchHHHHHHH--HHHH-----h-ccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHH
Confidence 4566666555455556666554433311 1111 1 135666666677778887777777788765421
Q ss_pred -------C--CC--CCc--chhh-hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHH
Q 020432 83 -------G--LR--GNS--HARI-SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYI 148 (326)
Q Consensus 83 -------~--~~--~~~--~~~~-~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i 148 (326)
+ ++ ++. +.++ -++.+++||..+.+++.+++.+.......-+.|.|+.+..|.+...........-.
T Consensus 220 ~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~ 299 (448)
T COG2271 220 EYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEV 299 (448)
T ss_pred HhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 0 00 111 1222 35778999999999999999999999999999999999988764434444445567
Q ss_pred HHHHHHHHHHHHHHhcc-cchhhh-hHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC
Q 020432 149 CSFIVSILLQEMAWTGQ-RLKAYY-SAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL 226 (326)
Q Consensus 149 ~~~i~~~~~~~l~k~~g-kkk~~~-~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~ 226 (326)
+++.|++++++++.|.- +||... ++.+++..++.+.+++.|..+.....+.....|+-..+..++.-....|+++.+.
T Consensus 300 agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A 379 (448)
T COG2271 300 AGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA 379 (448)
T ss_pred HhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh
Confidence 88999999999985442 233322 2322232333334444454445566666667777666666555555557766544
Q ss_pred CCceEEEehhHHHHHH-HhhHHHHhhhhc
Q 020432 227 SGCAFVCGTLSFLDKM-SCGIAVYVLQSY 254 (326)
Q Consensus 227 r~~g~i~s~~sf~~Kl-~~~i~~~i~~~~ 254 (326)
- |...+...++.=+ |.+.++..++++
T Consensus 380 a--GtA~Gf~Glf~Yl~Ga~~a~~~~g~i 406 (448)
T COG2271 380 A--GTATGFVGLFAYLIGAALAGLPLGYI 406 (448)
T ss_pred c--cchhchhhhHHHHhhHHhcCCcceee
Confidence 3 6666666666666 555566556554
No 67
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.16 E-value=8.5e-09 Score=98.26 Aligned_cols=234 Identities=9% Similarity=-0.075 Sum_probs=135.5
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~ 82 (326)
+++. ++|||.+.+++......+|.++...+.-.+.+. .|...-.+.+....+. .+..+..+|++.++
T Consensus 114 ~~~~-~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-----------~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~ 180 (393)
T PRK11195 114 TELL-PGEKLVKANGWMEGSTIAAILLGTVLGGALADP-----------HAEAALAVCALIYLLA-ALFNLFIPRLGARR 180 (393)
T ss_pred HHHc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHHHHHHH-HHHHhcCCCCcccc
Confidence 3444 368999999998877777766655544333321 1222211222211112 22223355543221
Q ss_pred CC--CCCc----chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHH
Q 020432 83 GL--RGNS----HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSIL 156 (326)
Q Consensus 83 ~~--~~~~----~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~ 156 (326)
++ +++. ..++.++.+++||.++.......+.+..........+.|.+..+|.++...+.......++.+++++.
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~ 260 (393)
T PRK11195 181 PGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGA 260 (393)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHH
Confidence 11 1111 12334577889998876554444444444555566778888888886655666666667788888888
Q ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 157 LQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 157 ~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
.+++.+|.++ ++....+..+ ......+.+ + ++.+...+...+.|++.+..+....+++.|..|++.+ .|..+|..
T Consensus 261 ~~~l~~~~~~-~~~~~~g~~~-~~~~~~~~~-~-~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~-~g~~~a~~ 335 (393)
T PRK11195 261 AARLVTLETV-LRVLPAGILM-GLVVLLMAL-Q-HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVG-AGHSIAVQ 335 (393)
T ss_pred HHHHhcCCcc-cchHHHHHHH-HHHHHHHHH-H-hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCccccc-chhHHHHH
Confidence 8888766654 4444444322 222222222 2 2334444555577888877777777888887655431 26678899
Q ss_pred HHHHHHHhhHHHHhhhhc
Q 020432 237 SFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 237 sf~~Kl~~~i~~~i~~~~ 254 (326)
++.+-++..++.++.+..
T Consensus 336 ~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 336 NFNENLAMLLMLGLYSLL 353 (393)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999999988888777643
No 68
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.15 E-value=3.9e-09 Score=98.88 Aligned_cols=242 Identities=12% Similarity=0.078 Sum_probs=158.8
Q ss_pred CCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC---
Q 020432 7 LNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG--- 83 (326)
Q Consensus 7 ~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~--- 83 (326)
.|||+|.+..+.=...-.+|.++...+.-.+.+- . ++ ..-..+....+++.+.+.++..++...|..+..
T Consensus 118 ~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~---~---s~-~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~ 190 (403)
T PF03209_consen 118 APEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDP---F---SP-ERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAA 190 (403)
T ss_pred CCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccc---c---CH-HHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCC
Confidence 3678999999987777677765554433222221 1 11 122223333445555566666555544333222
Q ss_pred CCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHH-HH
Q 020432 84 LRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM-AW 162 (326)
Q Consensus 84 ~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l-~k 162 (326)
++++.++++.++++.+||+.++.....++..++.+.--..+=-|=-+++|.+....+.+......+.+++.....++ .|
T Consensus 191 ~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~ 270 (403)
T PF03209_consen 191 ERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSR 270 (403)
T ss_pred CCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34456788999999999999887766666666666555555556666777765555555556667778888888876 46
Q ss_pred hcccchhhhhHhHHHHHHHHHHHhhcC-CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHH
Q 020432 163 TGQRLKAYYSAGGVLWVFCGAGILILP-MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDK 241 (326)
Q Consensus 163 ~~gkkk~~~~~~~~l~~~~~~~l~~~~-~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~K 241 (326)
+.+| +++-..|+...+.+...+.+.. .++.+.+-...++.|+|.|.+..-..+++-|..+.++ .|+.-+.|...+-
T Consensus 271 ~~~~-~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~--aG~~mG~WGaaQA 347 (403)
T PF03209_consen 271 RLGK-KRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR--AGLFMGAWGAAQA 347 (403)
T ss_pred CCCc-hHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc--hhHHHHHHHHHHH
Confidence 6665 5555667766555554444332 2345677777889999999998877778888887654 3888999999999
Q ss_pred HHhhHHHHhhhhcccCC
Q 020432 242 MSCGIAVYVLQSYQSMS 258 (326)
Q Consensus 242 l~~~i~~~i~~~~l~~~ 258 (326)
++.|+|..+-|...+..
T Consensus 348 ~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 348 IARGLGTFLGGALRDLV 364 (403)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999988877665443
No 69
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.15 E-value=4.9e-09 Score=98.60 Aligned_cols=234 Identities=10% Similarity=-0.057 Sum_probs=156.2
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCc
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNS 88 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~ 88 (326)
|+.|.+..+.=+.+.+++.+ +..++-...| | .-|||..-.+++.++++..+.-..... |.+ .++ ++.
T Consensus 132 p~~~~~Aiaiv~~G~tlA~v----~GvPLGt~ig-----~-~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~-~~~-~~~ 198 (394)
T COG2814 132 PGKRGRALALVFTGLTLATV----LGVPLGTFLG-----Q-LFGWRATFLAIAVLALLALLLLWKLLP-PSE-ISG-SLP 198 (394)
T ss_pred ccchhhHHHHHHHHHHHHHH----HhccHHHHHH-----H-HhhHHHHHHHHHHHHHHHHHHHHHhCC-Ccc-CCC-CCC
Confidence 45666666655544444433 3445544443 4 479999998888888887776555454 111 111 121
Q ss_pred chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 89 HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
...++....+||+..+...+..++...+.+...+|.--|.+++.|.+.+..+.+.+...++.++|+.+.+++.+| +. +
T Consensus 199 ~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~-~ 276 (394)
T COG2814 199 GPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GP-R 276 (394)
T ss_pred cchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cc-h
Confidence 223345677789998888888888888888889999999999999877778888888899999999999999988 43 4
Q ss_pred hhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 169 AYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
+.......+.+.....+.+.+ ++.+..++...+.|+..+......+.-+++..+++. ....|.+.-...+|.++|.
T Consensus 277 ~~l~~~~~l~a~~~l~l~~~~-~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~---~~a~sl~~aa~nlgia~GA 352 (394)
T COG2814 277 RALIAALLLLALALLALTFTG-ASPALALALLFLWGFAFSPALQGLQTRLARLAPDAA---DLAGSLNVAAFNLGIALGA 352 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCch---HHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555555 344555555555666665555555555555333333 3457788888888888888
Q ss_pred HhhhhcccCCCcc
Q 020432 249 YVLQSYQSMSPTV 261 (326)
Q Consensus 249 ~i~~~~l~~~~y~ 261 (326)
.+-|.+.+..||.
T Consensus 353 ~lGG~v~~~~g~~ 365 (394)
T COG2814 353 ALGGLVLDALGYA 365 (394)
T ss_pred HHHHHHHHhhchH
Confidence 8777766555553
No 70
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.13 E-value=9.3e-09 Score=97.42 Aligned_cols=228 Identities=8% Similarity=0.008 Sum_probs=119.9
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
|+++|.+..+.-..+..+|..+...+...+. + ..||++.-.+.+++..+..+...+..+|+.+++ +
T Consensus 121 ~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---------~-~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~----~ 186 (382)
T PRK10091 121 KPGKVTAAVAGMVSGMTVANLLGIPLGTYLS---------Q-EFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEA----K 186 (382)
T ss_pred ChHHhhHHHHHHHHHHHHHHHHhccHHHHHh---------h-hccHHHHHHHHHHHHHHHHHHHHHhCCCCCccc----c
Confidence 4566777766655555555443322221111 1 247877766666666555554444456643211 1
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
.+.++.++ .++|++.+......++..........|.+.|+++..|.++...+.+.....++.+++.++.+++.+|.++
T Consensus 187 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~- 264 (382)
T PRK10091 187 GGLREQFH-FLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSP- 264 (382)
T ss_pred cCHHHHHH-HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCc-
Confidence 12233444 4566666554444444444444445677778777777655545555556677788889999999888885
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHH-HHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGI-SMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~-am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
|+....+..+..++.+.+.... ++.+..++...+.+.|......... ....+..+ .|..|. +.......+|.++
T Consensus 265 ~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~g~~~ 339 (382)
T PRK10091 265 LRIAAVTDFIIVLALLMLFFFG-GMKTASLIFAFICCAGLFALSAPLQILLLQNAKG--GELLGA--AGGQIAFNLGSAI 339 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCc--chHHHH--HHHHHHHHHHHHH
Confidence 4455555544444443333322 2233334444444554433332222 22222222 222232 1224556788888
Q ss_pred HHHhhhhccc
Q 020432 247 AVYVLQSYQS 256 (326)
Q Consensus 247 ~~~i~~~~l~ 256 (326)
|..+.|.+.+
T Consensus 340 Gp~~~G~l~~ 349 (382)
T PRK10091 340 GAYCGGMMLT 349 (382)
T ss_pred HHHHhHHHHH
Confidence 8888887654
No 71
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.12 E-value=1.8e-09 Score=104.91 Aligned_cols=235 Identities=11% Similarity=-0.048 Sum_probs=134.1
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc----ccC-
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL----KMG- 83 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~----~~~- 83 (326)
+++|.+..++-..+..+|..+...+...+. + ..||++.-.+.+++.++..+..++..+++.. +.+
T Consensus 138 ~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~---------~-~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 207 (455)
T TIGR00892 138 YRRRPLANGLAMAGSPVFLSTLAPLNQYLF---------E-SFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKS 207 (455)
T ss_pred HhhHHHHHHHHHhcccHHHHHHHHHHHHHH---------H-HhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccc
Confidence 467777777766666666544333222222 2 2478877777776655443333222221110 000
Q ss_pred -C--------CC--Ccchhh---hH--HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH
Q 020432 84 -L--------RG--NSHARI---SW--AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 147 (326)
Q Consensus 84 -~--------~~--~~~~~~---~l--~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~ 147 (326)
+ ++ +....+ ++ ...++||.++......++..........+++.|.++ .|.++...+.+.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~ 286 (455)
T TIGR00892 208 KEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIG 286 (455)
T ss_pred cccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 0 00 000011 11 146789998877766666666666667788888876 5665444445444555
Q ss_pred HHHHHHHHHHHHHHHh--cccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC
Q 020432 148 ICSFIVSILLQEMAWT--GQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~--~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~ 225 (326)
++.+++.++.+++.+| .++ ++....+......+...+.....++.+.+++...+.|++.+......++++.|.++.+
T Consensus 287 ~~~~~~~~~~g~l~d~~~~~~-~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~ 365 (455)
T TIGR00892 287 FVDIFARPSCGLIAGLKWIRP-HVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQ 365 (455)
T ss_pred HHHHHHHHHHHHHhcccccCH-HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHH
Confidence 6667777777777643 322 2222332222111111111111234555566677888888888888999999999876
Q ss_pred CCCceEEEehhHHHHHHHhhHHHHhhhhcccC
Q 020432 226 LSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSM 257 (326)
Q Consensus 226 ~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~ 257 (326)
++ |..+|.++....++..+|..+.|.+.+.
T Consensus 366 ~~--g~~~g~~~~~~~lg~~igp~i~G~l~~~ 395 (455)
T TIGR00892 366 RF--SSAVGLVTIVECCAVLIGPPLAGRLVDA 395 (455)
T ss_pred HH--hhHHhHHHHHHHHHHHccccceeeeehh
Confidence 65 5568889998999988888888876543
No 72
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.12 E-value=5.8e-09 Score=100.28 Aligned_cols=161 Identities=9% Similarity=0.015 Sum_probs=105.3
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--------ccchhhhHHHHHHHHHHHHHHHHHHHhc
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ--------SAKALVPAIIYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~--------~~~~~~~~~~~i~~~i~~~~~~~l~k~~ 164 (326)
..+.++|||+++...+..++..........+++.|..+. +.++ ...+.......+..+++.++.+++.+|+
T Consensus 200 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~ 278 (418)
T TIGR00889 200 DAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHEF-GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF 278 (418)
T ss_pred hHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHHh-cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345789999987776666666555555567777777553 3222 2224444455667777788888999888
Q ss_pred ccchhhhhHhHHHHHHHHHHHhhcCCcc--hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhH-HHHH
Q 020432 165 QRLKAYYSAGGVLWVFCGAGILILPMNM--SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLS-FLDK 241 (326)
Q Consensus 165 gkkk~~~~~~~~l~~~~~~~l~~~~~~~--~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~s-f~~K 241 (326)
|+ |+.+..+.++..+....+....++. .+..++..++.|++.+...+....+++|..+.+.| |..+|..+ ....
T Consensus 279 g~-r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~--g~~~g~~~~~~~~ 355 (418)
T TIGR00889 279 GI-KKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIR--ASAQGLFTLMCNG 355 (418)
T ss_pred Cc-HHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHh
Confidence 85 5566666665544433333322211 23345566778888877777777888999988777 55678876 5677
Q ss_pred HHhhHHHHhhhhcccC
Q 020432 242 MSCGIAVYVLQSYQSM 257 (326)
Q Consensus 242 l~~~i~~~i~~~~l~~ 257 (326)
+|..+|..+.|.+.+.
T Consensus 356 lg~~iGp~l~G~l~~~ 371 (418)
T TIGR00889 356 FGSLLGYILSGVMVEK 371 (418)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 8888888888876543
No 73
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.12 E-value=2.8e-08 Score=95.30 Aligned_cols=240 Identities=10% Similarity=-0.035 Sum_probs=134.8
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCC-Cc---------------cchhccchhhhhHHHHHHHHHhhhh
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK-TH---------------ADLENQYRWIAYSSIFIGCCFVGIF 71 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~-~~---------------~~~~~g~~~~~~i~~~i~~~~~~~~ 71 (326)
++++|.+..+..+.+..+|..+...+...+....... +. .....+|++.-.+.+++.++..++.
T Consensus 124 ~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~ 203 (410)
T TIGR00885 124 PESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLI 203 (410)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566888888888888888877666554444321100 00 0012468877667776655554433
Q ss_pred eeeecCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccchhhhHHHHHHH
Q 020432 72 LSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL-RMGQSAKALVPAIIYICS 150 (326)
Q Consensus 72 ~~~tkE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l-~~~~~~~~~~~~~~~i~~ 150 (326)
. ..|++..+++++++.+.+++++.++|||+++...+..++..........+++.|.+++. +.+...............
T Consensus 204 ~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~ 282 (410)
T TIGR00885 204 M-LTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIF 282 (410)
T ss_pred H-HhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence 2 24444322222222334456778899999987665555544444455677777776532 211111122222233455
Q ss_pred HHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCce
Q 020432 151 FIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCA 230 (326)
Q Consensus 151 ~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g 230 (326)
.++-++..++.+|.++ |+.+.....+.++..+++.+.+ + . ..+....+.|++.++.++..+++..|..+++.+..+
T Consensus 283 ~vGR~~~~~l~~r~~~-~~~l~i~~~~~~~~~ll~~~~~-~-~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s 358 (410)
T TIGR00885 283 FISRFIGTWLISYLAA-HKVLMAYAIIGMALCLGSIFAG-G-H-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGA 358 (410)
T ss_pred HHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHcC-C-h-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhH
Confidence 7777888888888774 4444444444333333333333 2 2 234556677888888889999999999887654322
Q ss_pred EEEehhHHHHHHHhhHHHHhhhhccc
Q 020432 231 FVCGTLSFLDKMSCGIAVYVLQSYQS 256 (326)
Q Consensus 231 ~i~s~~sf~~Kl~~~i~~~i~~~~l~ 256 (326)
+...... +|.++...+.|++.+
T Consensus 359 ---~~l~~~~-~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 359 ---AGLVMAI-IGGGIVPPLQGFIID 380 (410)
T ss_pred ---HHHHHHH-hccchHHHHHHHHHH
Confidence 1222222 666777777777644
No 74
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.10 E-value=2.6e-08 Score=95.61 Aligned_cols=231 Identities=10% Similarity=0.020 Sum_probs=121.6
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCC-C
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLR-G 86 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~-~ 86 (326)
+++||.+..++=.....+|..+...+...+. + ..||++.-.+.++++++..+...+..+|...+++++ +
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~---------~-~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~ 203 (413)
T PRK15403 134 GQTKGIKLMAIITSIVLVAPIIGPLSGAALM---------H-FVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFS 203 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------H-hcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCC
Confidence 3456666655444444444443332222221 1 247777666666665555544334456643221111 1
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
+....++++.++|||+++...+.+.+..........+.|+|+++..|.++............+.++++.+...+.++..+
T Consensus 204 ~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~ 283 (413)
T PRK15403 204 AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTE 283 (413)
T ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc
Confidence 11335678899999999987777777777666667788999999888765444444334455566666666665433232
Q ss_pred chhhhhHhHHHHHHHHHHHhh---cCCcchhHHHHHHHHHhhHHHHHHHHHH--HHhHhhhcCCCCCceEEEehhHHHHH
Q 020432 167 LKAYYSAGGVLWVFCGAGILI---LPMNMSAFMYVLAIFVGIANALMMVTGI--SMQNVLVGEDLSGCAFVCGTLSFLDK 241 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~---~~~~~~~~~l~~~~~~g~g~~~~~~~~~--am~aD~id~~~r~~g~i~s~~sf~~K 241 (326)
+|. ...+..+..++..++.. ..+++....++..++.++|.+...+... ++.++..+ .|...|..++.+=
T Consensus 284 ~~~-~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~-----~G~a~a~~~~~~~ 357 (413)
T PRK15403 284 PRF-IWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLP-----KGTVSASLNMVIL 357 (413)
T ss_pred hhH-HHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCC-----CcHHHHHHHHHHH
Confidence 232 21111111222221111 1123322334555566777766655444 32222111 2555677777776
Q ss_pred HHhhHHHHhhhhc
Q 020432 242 MSCGIAVYVLQSY 254 (326)
Q Consensus 242 l~~~i~~~i~~~~ 254 (326)
.+..++....++.
T Consensus 358 ~~~~~~~~~~g~~ 370 (413)
T PRK15403 358 MVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHHH
Confidence 6666776666654
No 75
>PRK10054 putative transporter; Provisional
Probab=99.10 E-value=3.7e-09 Score=100.84 Aligned_cols=234 Identities=10% Similarity=0.031 Sum_probs=124.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
++++|.+..++......+|..+...+...+.. .||+..-.+.+++..+..+...+..+|...++++ ++
T Consensus 126 ~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-----------~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~~~-~~ 193 (395)
T PRK10054 126 SSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-----------QSINLPFWLAAICSAFPLVFIQIWVQRSEKAIAT-ET 193 (395)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------hccCcHHHHHHHHHHHHHHHHHHHHhcccccccc-ch
Confidence 36678888888777777777665544433322 1333333333333333322222223332111111 11
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--cccchhhhHHHHHHHHHHHHHHHHHHHhcc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG--QSAKALVPAIIYICSFIVSILLQEMAWTGQ 165 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~--~~~~~~~~~~~~i~~~i~~~~~~~l~k~~g 165 (326)
.+ ..+.+.++|||+++...+..++..........+.+.|.....+.+ ......+.....+......+..+++.+|.+
T Consensus 194 ~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 272 (395)
T PRK10054 194 GS-VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAAN 272 (395)
T ss_pred hh-hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCC
Confidence 11 233478899999988776666666655555556666665543321 111222222222222232334445555555
Q ss_pred cchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhh
Q 020432 166 RLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCG 245 (326)
Q Consensus 166 kkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~ 245 (326)
+ |+....+..+..++...+.+ ..++.+..++..++.|+|.+...+..++.+.|.++++.+ |..++..+ ..-+|.+
T Consensus 273 ~-~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~--~~~~~~~~-~~~~G~~ 347 (395)
T PRK10054 273 I-RPLMTAGTLCFVIGLVGFIF-SGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMK--ASYFSAQS-LGWLGAA 347 (395)
T ss_pred c-hhHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccc--eehHhHHH-HHHHHHH
Confidence 3 44445555444444333332 223444455566778888877777778889999988777 45566655 3447778
Q ss_pred HHHHhhhhcccCCC
Q 020432 246 IAVYVLQSYQSMSP 259 (326)
Q Consensus 246 i~~~i~~~~l~~~~ 259 (326)
+|..+.|.+.+..|
T Consensus 348 ~Gp~~~G~l~~~~g 361 (395)
T PRK10054 348 INPLVSGVILTTLP 361 (395)
T ss_pred HHHHHHHHHHHHcC
Confidence 88888887755444
No 76
>PRK12382 putative transporter; Provisional
Probab=99.09 E-value=1.2e-08 Score=96.88 Aligned_cols=226 Identities=8% Similarity=-0.036 Sum_probs=124.3
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGN 87 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~ 87 (326)
++|||.+..++.......|..+...+...+.+ ..||+...++..++.++..... ...+|.+. +++++
T Consensus 142 ~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~----------~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~ 208 (392)
T PRK12382 142 GPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS----------HFGFAALALTTMVLPLLAWAFN-GTVRKVPA--HAGER 208 (392)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHh----------ccChHHHHHHHHHHHHHHHHHH-HhccCCCC--CcccC
Confidence 47899999998776666665544443333221 2467765544433333222211 12222211 11112
Q ss_pred cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 88 SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 88 ~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
.+.++.+|..++++ ....+..........+.+.|+++. +.++ .........++.+++.++.+++.+|.++|
T Consensus 209 ~~~~~~~~~~~~~~------~~~~l~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~ 279 (392)
T PRK12382 209 PSLWSVVGLIWKPG------LGLALQGVGFAVIGTFVSLYFASK-GWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGV 279 (392)
T ss_pred chHHHHHHHHHHhH------HHHHHHHHHHhHHHHHHHHHHHhc-CCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 22333333332211 112222333444556677777653 3322 22223334556677788888888888864
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
| ....+..+..++...+.+. ++....++...+.|++.+...+...+...|..++++| |..+|.++....++.+++
T Consensus 280 ~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~ig 354 (392)
T PRK12382 280 K-VAIVSLLVETVGLLLLWLA--PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVR--GTALGGYAAFQDIAYGVS 354 (392)
T ss_pred e-ehHHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHH
Confidence 4 4555555544444443332 2344455566677787776666666667777666565 667899999999999999
Q ss_pred HHhhhhcccCCCc
Q 020432 248 VYVLQSYQSMSPT 260 (326)
Q Consensus 248 ~~i~~~~l~~~~y 260 (326)
..+.+.+.+..||
T Consensus 355 ~~~~g~l~~~~g~ 367 (392)
T PRK12382 355 GPLAGMLATSFGY 367 (392)
T ss_pred HHHHHHHHHHhCc
Confidence 9888876544444
No 77
>TIGR00898 2A0119 cation transport protein.
Probab=99.07 E-value=2.3e-08 Score=98.09 Aligned_cols=153 Identities=13% Similarity=0.043 Sum_probs=92.4
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
.++++++||.++...+..++.+...........++.. .++.+ .........+..+++.++..++.+|+|| |+...
T Consensus 315 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~i~~~~~~~~l~dr~gr-r~~~~ 389 (505)
T TIGR00898 315 SFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLG-NLGGN---IYLDLFISGLVELPAKLITLLLIDRLGR-RYTMA 389 (505)
T ss_pred cHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccCCC---hHHHHHHHHHHHHHHHHHHHHHHHHhCC-HHHHH
Confidence 6788999999887665544444333222111122211 11211 1122223345567777788888888885 55566
Q ss_pred HhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 173 AGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 173 ~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.+.++..++.+.+.+.+........+..++.+++.+......++..+|..+.+.|. ...|..+....+|..++..+.+
T Consensus 390 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~--~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 390 ASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRN--LGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHh--hhHhHHHHHHHHHHHHHhHHHH
Confidence 66655555555555555333344444555666777777788888999999887774 4467888888888777776665
No 78
>PRK11043 putative transporter; Provisional
Probab=99.04 E-value=6e-08 Score=92.23 Aligned_cols=196 Identities=10% Similarity=-0.011 Sum_probs=106.9
Q ss_pred ccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 51 NQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN 130 (326)
Q Consensus 51 ~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 130 (326)
.||+..-.+.+++.++..+..++ .+|+..+++ +.+.++++++++|||+++.....+.+..........+.|+|.++
T Consensus 157 ~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 232 (401)
T PRK11043 157 FGWQAIFATLFAITLLLILPTLR-LKPSKKARK---QSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ 232 (401)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH-cCCCCCccc---cchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 46776655555555554443333 344322111 11234578889999998766555555444445556677888765
Q ss_pred HhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHh---hcCCcchhHHHHHHHHHhhHH
Q 020432 131 DLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGIL---ILPMNMSAFMYVLAIFVGIAN 207 (326)
Q Consensus 131 ~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~---~~~~~~~~~~l~~~~~~g~g~ 207 (326)
.|.++...+.......++.+++..+..++.+|+++|| ....+.....++...++ +....+....++...+.|++.
T Consensus 233 -~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (401)
T PRK11043 233 -MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ-LLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAAN 310 (401)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 4665443444333445566777777888877777533 33333322222222221 112233334444455667777
Q ss_pred HHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 208 ALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 208 ~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
+...+...+...|..++ ++ |...|..+...-.+..++..+.+.+.
T Consensus 311 ~~~~~~~~~~~~~~~~~-~~--g~~~g~~~~~~~~~~~~~~~~~g~l~ 355 (401)
T PRK11043 311 GAIYPIVVAQALRPFPQ-AT--GKAAALQNTLQLGLCFLASLLVSALI 355 (401)
T ss_pred HHHHHHHHHHHhhhCcc-cC--hHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 76666665555555443 23 55577777766666666667777653
No 79
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.04 E-value=4e-08 Score=92.21 Aligned_cols=240 Identities=11% Similarity=0.076 Sum_probs=167.9
Q ss_pred CCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCC---------ccchhccchhhhhHHHHHHHHHhhhheeeecC
Q 020432 7 LNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT---------HADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 77 (326)
Q Consensus 7 ~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~---------~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE 77 (326)
+|+..| +|+.-.....+|+.+..++....+-..+..+ ..| ...-+.+..+.++.-.+..+-.++.+++
T Consensus 146 k~~~~r--iS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~-~~~~ri~~~l~A~W~li~~iPm~~~v~~ 222 (438)
T COG2270 146 KDNMGR--ISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPAD-GEDVRITGLLAALWWLLFALPMILNVHD 222 (438)
T ss_pred ccccCc--ccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccc-cccchhHHHHHHHHHHHHHhHHHhcccc
Confidence 344444 4666666677887776554433222211111 011 1234444455555555555555667777
Q ss_pred CCcccCCCCC------cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHH
Q 020432 78 PRLKMGLRGN------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSF 151 (326)
Q Consensus 78 ~~~~~~~~~~------~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~ 151 (326)
.+..++...+ +.++.++|++++.|..+..++.+++.+-+.+...+....|-+..+|.+...+..+.....+..+
T Consensus 223 ~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~ 302 (438)
T COG2270 223 AEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAA 302 (438)
T ss_pred cccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 6532211111 2345678899999999888899999999999988899999998888866556677777888899
Q ss_pred HHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceE
Q 020432 152 IVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAF 231 (326)
Q Consensus 152 i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~ 231 (326)
++.++.+++.+|+|- |.....+.+++.+..+..++... ....++.+.+.|...|+.+..+=+.++..++++++ |-
T Consensus 303 lg~ii~g~Ld~rfg~-k~vl~~~lvi~~~~~~~~~~~~~--~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~--~~ 377 (438)
T COG2270 303 LGAIIAGFLDERFGS-KPVLMIGLVILSIAALYLIFLEG--ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKE--GR 377 (438)
T ss_pred HHHHHHHHHHHHhCC-ceeehHHHHHHHHHHHHHHHccc--cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccc--cc
Confidence 999999999988875 45667777766666555555432 34566677888999999999999999999999877 55
Q ss_pred EEehhHHHHHHHhhHHHHhhhhc
Q 020432 232 VCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 232 i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.||..+...|.+.-.|....+..
T Consensus 378 fFglyaltgra~S~~gp~lv~v~ 400 (438)
T COG2270 378 FFGLYALTGRAASFLGPFLVAVI 400 (438)
T ss_pred eeehhhhhhhHHHHHHHHHHHHH
Confidence 79999999999998898888865
No 80
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.02 E-value=7.8e-08 Score=88.83 Aligned_cols=239 Identities=12% Similarity=0.005 Sum_probs=130.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCC-c----c-chhccchhhhhHHHHHHHHHhh-hheeeecCCCc
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT-H----A-DLENQYRWIAYSSIFIGCCFVG-IFLSRTEEPRL 80 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~-~----~-~~~~g~~~~~~i~~~i~~~~~~-~~~~~tkE~~~ 80 (326)
++|+|++-.++=+.+-.+|.++...+.-.++....... + . .....|++.-.+++.+..+..+ ..+...+|.++
T Consensus 40 ~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~ 119 (310)
T TIGR01272 40 PIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE 119 (310)
T ss_pred CcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc
Confidence 56667777777777777777766555443332211000 0 0 0012455554444444333332 22333333211
Q ss_pred ccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcccchhhhHHHHHHHHHHHHHHH
Q 020432 81 KMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND--LRMGQSAKALVPAIIYICSFIVSILLQ 158 (326)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~--l~~~~~~~~~~~~~~~i~~~i~~~~~~ 158 (326)
+++++.+.......+..+|+|+++...+..++....-.....+++.|+++. .|.++...+........+.+++.++.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~ 199 (310)
T TIGR01272 120 ADVARVSSGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGS 199 (310)
T ss_pred ccccccccccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111100000011234577888887755555555556777789999999864 465554455555566677888899999
Q ss_pred HHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHH
Q 020432 159 EMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSF 238 (326)
Q Consensus 159 ~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf 238 (326)
++.+|+++ ++....+..+.++...+....+ + .. ......+.|++.+...+..+++..+..+++.... .+...+
T Consensus 200 ~l~~r~g~-~~~l~~~~~l~~~~~~l~~~~~-~-~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~a---sai~~~ 272 (310)
T TIGR01272 200 AVMPMISQ-GRYLAFNAFLAVLLSIGAALTH-G-YV-AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQG---SGILCL 272 (310)
T ss_pred HHHHHhCH-HHHHHHHHHHHHHHHHHHHHcC-C-HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh---HHHHHH
Confidence 99988885 4445555544443333333322 2 22 2234456789998888888888888776643211 233332
Q ss_pred HHHHHhhHHHHhhhhc
Q 020432 239 LDKMSCGIAVYVLQSY 254 (326)
Q Consensus 239 ~~Kl~~~i~~~i~~~~ 254 (326)
.-+|.++...+.|.+
T Consensus 273 -~~~Gg~i~P~l~G~l 287 (310)
T TIGR01272 273 -AIVGGAIVPLLQGSL 287 (310)
T ss_pred -HHhcchHHHHHHHHH
Confidence 335556666666654
No 81
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.00 E-value=5.2e-08 Score=94.31 Aligned_cols=206 Identities=8% Similarity=-0.054 Sum_probs=118.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHH-----HhccCCC----ccchhccchhhhhHHHHHHHHHhhhheeeecCC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVF-----SVSTAKT----HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEP 78 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~-----~~~~~~~----~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~ 78 (326)
+++||.+..++-....++|..+...+.++++ ...|... .++ ..|++....++.++.++..++.++..+++
T Consensus 157 p~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~-~~~~~~~~~~~~~~~iv~~i~~~~~~~~~ 235 (462)
T PRK15034 157 PKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGS-VMSLANAAWIWVPLLAIATIAAWSGMNDI 235 (462)
T ss_pred CHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccc-hHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5677889888886666666665555554433 3232211 011 34677777777776666666555554443
Q ss_pred CcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHH
Q 020432 79 RLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQ 158 (326)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~ 158 (326)
+. ++.+ .++.+..+|||..+.+++.|++.+........++|+|.+.... ............+...+..++.+
T Consensus 236 ~~-----~~~~-~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG 307 (462)
T PRK15034 236 AS-----SRAS-IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGG 307 (462)
T ss_pred cc-----cccC-HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhH
Confidence 22 1222 4567779999999999999999888888888899999877543 21111111222344566667888
Q ss_pred HHHHhcccchhhhhHhHHHHHHHH-HHHhhcCCc---chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhc
Q 020432 159 EMAWTGQRLKAYYSAGGVLWVFCG-AGILILPMN---MSAFMYVLAIFVGIANALMMVTGISMQNVLVG 223 (326)
Q Consensus 159 ~l~k~~gkkk~~~~~~~~l~~~~~-~~l~~~~~~---~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id 223 (326)
++++|+|+| +....+.+...+.. ..+...|.+ +.+...+......++.|..+...+-|+|+..+
T Consensus 308 ~LADRiG~~-~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~ 375 (462)
T PRK15034 308 AISDKFGGV-RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFR 375 (462)
T ss_pred HHHHhcCch-HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHh
Confidence 999888864 44555554433333 233344432 22322222222223444444556666666664
No 82
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.00 E-value=1.6e-08 Score=97.15 Aligned_cols=131 Identities=10% Similarity=-0.022 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhh--cCCcc------
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILI--LPMNM------ 192 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~--~~~~~------ 192 (326)
..+.+++.. ..|.+............+..+++.++.+++.+|.+| |+....+.++.+++...+.+ ....+
T Consensus 304 ~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (481)
T TIGR00879 304 MYYSPTIFE-NAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGR-RPLLLIGAAGMAICLFVLGILGASFVTGSSKSS 381 (481)
T ss_pred HHHHHHHHH-HcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHhhcccCCcccch
Confidence 344555543 445544333444445566778888899999988885 55556665554444443331 11111
Q ss_pred hhHHHHHHHHHhhHHH-HHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 193 SAFMYVLAIFVGIANA-LMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~-~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
....+....+.+.+.+ ......+++.+|+.+.++| |...+...+...++..++..+.+.+.
T Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~lg~~i~~~~~~~~~ 443 (481)
T TIGR00879 382 GNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLR--PKGISIAVAANWLANFIVGFLFPTML 443 (481)
T ss_pred hHHHHHHHHHHHHHHHccccCeehhhhhccCChHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222222222222 2235667788899887776 55678888888888888887777653
No 83
>PRK10133 L-fucose transporter; Provisional
Probab=98.99 E-value=1e-07 Score=92.23 Aligned_cols=157 Identities=11% Similarity=-0.032 Sum_probs=99.6
Q ss_pred hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 90 ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYV-INDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
..+..+.+++||.++...+..++..........+.+.|+ ++..|.++...+.......++.+++.++..++.+|+++ |
T Consensus 247 ~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~-~ 325 (438)
T PRK10133 247 FSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAP-H 325 (438)
T ss_pred hhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH-H
Confidence 345678899999987665555555555555566777674 55677766656666667778889999999999988885 4
Q ss_pred hhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 169 AYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
+....+..+.+.......+.+ + . ..+....+.|+|.+...+..++...+..+++. +.-.+...+ .=++.+++.
T Consensus 326 ~~l~~~~~~~~~~~~~~~~~~-~-~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~---~~as~l~~~-~~~g~~~~~ 398 (438)
T PRK10133 326 KVLAAYALIAMALCLISAFAG-G-H-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDT---KYGSSFIVM-TIIGGGIVT 398 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcC-C-h-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhh---ccchhHHhH-HhccchHHH
Confidence 455555544333333333333 2 2 22444567889999998888888888776543 232333332 224556666
Q ss_pred Hhhhhc
Q 020432 249 YVLQSY 254 (326)
Q Consensus 249 ~i~~~~ 254 (326)
.+.|.+
T Consensus 399 ~i~G~l 404 (438)
T PRK10133 399 PVMGFV 404 (438)
T ss_pred HHHHHH
Confidence 666654
No 84
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.97 E-value=9.6e-08 Score=90.38 Aligned_cols=155 Identities=10% Similarity=-0.003 Sum_probs=92.6
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
+.++.++||+++......++..........+.|.|.++ .|.++...+.+.....+..+++..+.+++.+|.++ |+...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~-~~~l~ 269 (381)
T PRK03633 192 SIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGR-LLVLR 269 (381)
T ss_pred CHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCc-HHHHH
Confidence 45677899998764433444444445556778888876 35544434444445566778888889999988885 55555
Q ss_pred HhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 173 AGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 173 ~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.+..+..++...+. + . ........+.|.+.....+...+...|..|++++ +-..+...+...+|..+|..+.|
T Consensus 270 ~~~~~~~~~~~~~~--~-~--~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~lG~~igp~~~G 342 (381)
T PRK03633 270 VQVFVVILGSIAML--S-Q--AAMAPALFILGAAGFTLYPVAMAWACEKVEHHEL--VAMNQALLLSYTVGSLLGPSFTA 342 (381)
T ss_pred HHHHHHHHHHHHHh--h-h--HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544333332222 2 1 1222233445555545556666666777766543 22355666677888888888888
Q ss_pred hccc
Q 020432 253 SYQS 256 (326)
Q Consensus 253 ~~l~ 256 (326)
++.+
T Consensus 343 ~l~~ 346 (381)
T PRK03633 343 MLMQ 346 (381)
T ss_pred HHHH
Confidence 7643
No 85
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.97 E-value=5.8e-08 Score=94.40 Aligned_cols=243 Identities=11% Similarity=0.036 Sum_probs=122.5
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcc-
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK- 81 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~- 81 (326)
.|.++ ++||.+..+.-..+..+|.++...+...+....+.. ..+ ..||++.-++.++..++..+.. +..+|.++.
T Consensus 146 ~e~~~-~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~-~~gWr~~f~~~~~~~~~~~~~~-~~l~~s~~~l 221 (479)
T PRK10077 146 AEIAP-AHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDAS-WLN-TDGWRYMFASEAIPALLFLMLL-YFVPETPRYL 221 (479)
T ss_pred HhhCC-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-ccc-cCChHHHHHHHHHHHHHHHHHH-HcCCCCcHHH
Confidence 45555 478999999888877788776555444433221100 011 2588887666555555544433 346664321
Q ss_pred --cCC-CC------------C-cchhhhHHHHhhc-----hhHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHH
Q 020432 82 --MGL-RG------------N-SHARISWAYWFKK-----ILYYQVALVYMLTRLV---------VNVSQAYLAFYVIND 131 (326)
Q Consensus 82 --~~~-~~------------~-~~~~~~l~~~~~N-----~~~~~~~~~~~~~~~~---------~~~~~~~~~~Y~~~~ 131 (326)
+.+ ++ + ....++.+...++ ++++......+..... .+....+.|++. ..
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~-~~ 300 (479)
T PRK10077 222 MSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF-KT 300 (479)
T ss_pred HHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH-HH
Confidence 000 00 0 0011122222221 1111111111111111 111122233333 33
Q ss_pred hcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhc-CCcch-hHHHHHHHHHhhHHHH
Q 020432 132 LRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILIL-PMNMS-AFMYVLAIFVGIANAL 209 (326)
Q Consensus 132 l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~-~~~~~-~~~l~~~~~~g~g~~~ 209 (326)
.|.+............+..+++.++.+++.+|+|| |+.++.+..+.+++...+... ..+.. .......++.+.+.+.
T Consensus 301 ~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~-r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (479)
T PRK10077 301 LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGR-KPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAM 379 (479)
T ss_pred cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcC-hHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhc
Confidence 45433222333334556677888888899988885 556677666655554443322 11211 1222223333444432
Q ss_pred -HHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 210 -MMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 210 -~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
..+..+++++|..+.+.| |...|..+...+++..++..+...
T Consensus 380 ~~~~~~~~~~~e~~p~~~r--~~~~g~~~~~~~~g~~~~~~~~p~ 422 (479)
T PRK10077 380 SWGPVCWVLLSEIFPNAIR--GKALAIAVAAQWIANYFVSWTFPM 422 (479)
T ss_pred cccchhHHHhHhhCChhHH--HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 235678899999887667 667888999999998888766543
No 86
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.96 E-value=5.5e-08 Score=95.10 Aligned_cols=136 Identities=10% Similarity=-0.075 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHH
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 200 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~ 200 (326)
..++|.|++...|.++...+.+.....++.+++.++.+++.+|.++ |+.+..+..+..+....+......+.+......
T Consensus 295 ~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (496)
T PRK03893 295 QALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGT-RKAYVCSLLISQLLIIPVFAIGGANVWVLGLLL 373 (496)
T ss_pred HHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHhhccccHHHHHHHHH
Confidence 4678889887777765555666666777888899999999988885 445555544433333222222222222222222
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCC
Q 020432 201 IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 201 ~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~ 259 (326)
.+.+...........+.++|..+.++| |..+|.......++..+|..+.|.+.+..|
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 374 FFQQMLGQGISGLLPKLIGGYFDTEQR--AAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred HHHHHHhcccchhhHHHHHhhCCHHHh--hcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 222222222334555678888887666 566888888888998888887776644333
No 87
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.93 E-value=4.8e-08 Score=94.91 Aligned_cols=235 Identities=10% Similarity=0.083 Sum_probs=143.4
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccC--C-C
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMG--L-R 85 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~--~-~ 85 (326)
++||.++.+.=..+..+|.++..-++..+.+. .-||...--+.|+++++.++++++..+|.+.++. + +
T Consensus 159 ~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s---------~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~ 229 (466)
T KOG2532|consen 159 PNERSTFIAILTAGSQLGTIITMPVSGLLCES---------SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEK 229 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc---------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHH
Confidence 68999999999888888887665444444332 3588888888999999988888777776443211 0 0
Q ss_pred -------CC------cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cchhhhH-HHHH
Q 020432 86 -------GN------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPA-IIYI 148 (326)
Q Consensus 86 -------~~------~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~---~~~~~~~-~~~i 148 (326)
+| .+....+|.++++++++.+.+..+..+........|.|.|+++++|++-. +.+.+|. ...+
T Consensus 230 El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~ 309 (466)
T KOG2532|consen 230 ELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAI 309 (466)
T ss_pred HHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHH
Confidence 00 11234799999999999999999999999999999999999999998643 3344443 2333
Q ss_pred HHHHHHHHHHHHHHh-cc---cchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC
Q 020432 149 CSFIVSILLQEMAWT-GQ---RLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 224 (326)
Q Consensus 149 ~~~i~~~~~~~l~k~-~g---kkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~ 224 (326)
..+++..+..++.+| .. +||....++....++.++.+-+.+.++..... .....+.+..+.+... ..-...|+
T Consensus 310 ~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~-~~l~~~~~~~g~~~~G--f~~~~~~~ 386 (466)
T KOG2532|consen 310 VKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAV-ILLTIAIGLSGFNISG--FYKNHQDI 386 (466)
T ss_pred HHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHH-HHHHHHHHHcccchhh--hHhhhhhc
Confidence 445555556665442 11 12322233333333344444444433331111 1111122222222211 12222343
Q ss_pred CCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 225 DLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 225 ~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
-.|..+++.+..++..-++.-++..+.+.+.
T Consensus 387 apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~ 417 (466)
T KOG2532|consen 387 APQHAGFVMGIINFVGALAGFIAPLLVGIIV 417 (466)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHheeeEe
Confidence 3445688899999888888778888888653
No 88
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.84 E-value=8.2e-08 Score=93.73 Aligned_cols=213 Identities=13% Similarity=0.076 Sum_probs=140.0
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcc----cC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLK----MG 83 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~----~~ 83 (326)
+.+||....++=...+.+|++....++..+.+..|.. . ..||++.-++-|++.++..+++++...+.+.+ ++
T Consensus 164 ~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~---~-~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~ 239 (495)
T KOG2533|consen 164 GKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG---G-LAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTD 239 (495)
T ss_pred ChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC---C-cCCceeehhHHHHHHHHHHheEEEEecCChhhccccch
Confidence 4678888777777777788888888877766644321 1 46999999999999999999888877653320 00
Q ss_pred C-----------C-----CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHH
Q 020432 84 L-----------R-----GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIY 147 (326)
Q Consensus 84 ~-----------~-----~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~ 147 (326)
+ + ++...+.++++.++.+..+...+.+++.....+....+.|+|++.+.|.+......+.....
T Consensus 240 ~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~ 319 (495)
T KOG2533|consen 240 EEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYD 319 (495)
T ss_pred HHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHH
Confidence 0 0 01123458899999999999999999999999999999999999966564433445555667
Q ss_pred HHHHHHHHHHHHHHHh----cccchhhhhHhHHHHHHHH-HHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhh
Q 020432 148 ICSFIVSILLQEMAWT----GQRLKAYYSAGGVLWVFCG-AGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLV 222 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~----~gkkk~~~~~~~~l~~~~~-~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~i 222 (326)
++.+++.++.++++.| .. +|..+.....+....+ +.+... +..............+.....+...+-..|..
T Consensus 320 ~~g~v~~i~ag~lsdr~~~~~~-~~~~~~~~~~~~~~~g~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~ 396 (495)
T KOG2533|consen 320 VGGIVGLILAGYLSDRLKTIFA-RRLLFIVFLCLYAIIGAISLLAA--AVLPGAYGAFLIGPYGLIATAIIALSWTSANL 396 (495)
T ss_pred hhhHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHHHHhh--ccchHHhHHHHhcchhhHHHHHHHHhhccccc
Confidence 7788888888888877 44 3544444444433333 333332 22333343334444555555555555555555
Q ss_pred cCCCC
Q 020432 223 GEDLS 227 (326)
Q Consensus 223 d~~~r 227 (326)
+.+.|
T Consensus 397 ~g~~k 401 (495)
T KOG2533|consen 397 AGNTK 401 (495)
T ss_pred cchHH
Confidence 44333
No 89
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.83 E-value=8e-08 Score=91.99 Aligned_cols=163 Identities=11% Similarity=0.013 Sum_probs=113.4
Q ss_pred chhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 89 HARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
+...+++.++|||.++......++..+.........|.|.++. +.++...+.+.....+..+++.++.+++.+|++| |
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~-~ 82 (417)
T PRK10489 5 SWLLDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMM-TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDR-K 82 (417)
T ss_pred HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCC-c
Confidence 4456788888999999888888888888888888888887664 4445555666677778888999999999999986 4
Q ss_pred hhhhHhHHHHHHHHHHHh---hcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhh
Q 020432 169 AYYSAGGVLWVFCGAGIL---ILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCG 245 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~---~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~ 245 (326)
+.+..+..+.+++...+. +...++.+.+++..++.|++.+...+...++++|.++.++| +...+......-+|..
T Consensus 83 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~ 160 (417)
T PRK10489 83 KLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENL--MQAGAITMLTVRLGSV 160 (417)
T ss_pred eEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHH--HHHHHHHHHHHhHHHH
Confidence 455555544443333221 22223445556666777888777777778889999987665 3345667677777777
Q ss_pred HHHHhhhhcc
Q 020432 246 IAVYVLQSYQ 255 (326)
Q Consensus 246 i~~~i~~~~l 255 (326)
+|..+.+.+.
T Consensus 161 ~g~~l~g~l~ 170 (417)
T PRK10489 161 ISPALGGLLI 170 (417)
T ss_pred hHHHHHHHHH
Confidence 7766666543
No 90
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.82 E-value=9e-07 Score=84.62 Aligned_cols=162 Identities=10% Similarity=0.035 Sum_probs=96.9
Q ss_pred hhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhh
Q 020432 92 ISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYY 171 (326)
Q Consensus 92 ~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~ 171 (326)
++...++|||+++..++..++.........+|...|.++.-+.+.........+..++.++.....+++.||+|- |+++
T Consensus 198 ~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~-~~ll 276 (400)
T PF03825_consen 198 LDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGI-KWLL 276 (400)
T ss_pred hHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCH-HHHH
Confidence 344578999999887777777777777777788888777654333323333345566778888888999888874 6666
Q ss_pred hHhHHHHHHHHHHHhhcCCcchhHHHHH----HHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh-HHHHHHHhhH
Q 020432 172 SAGGVLWVFCGAGILILPMNMSAFMYVL----AIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL-SFLDKMSCGI 246 (326)
Q Consensus 172 ~~~~~l~~~~~~~l~~~~~~~~~~~l~~----~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~-sf~~Kl~~~i 246 (326)
.++++..+ ....++-..+++.+...+. ..+.|+..+.........+.+.++++.|..| -+.. .+..=+|.++
T Consensus 277 ~~a~~~~~-vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~--Q~l~~~~~~Glg~~i 353 (400)
T PF03825_consen 277 LLALVAYA-VRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATA--QGLYSALSFGLGGAI 353 (400)
T ss_pred HHHHHHHH-HHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHH--HHHHHHHHhhHHHHH
Confidence 66665433 2222222221222332222 3457888888877777788888887766432 1221 1223344455
Q ss_pred HHHhhhhcccC
Q 020432 247 AVYVLQSYQSM 257 (326)
Q Consensus 247 ~~~i~~~~l~~ 257 (326)
|..+.|++.+.
T Consensus 354 G~~igG~l~~~ 364 (400)
T PF03825_consen 354 GSLIGGWLYDA 364 (400)
T ss_pred HHHHHHHHHHH
Confidence 55555655443
No 91
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.76 E-value=6.3e-07 Score=88.16 Aligned_cols=244 Identities=10% Similarity=-0.054 Sum_probs=121.9
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccC----CCcc---------chhccchhhhhHHHHHHHHHhhhheee
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTA----KTHA---------DLENQYRWIAYSSIFIGCCFVGIFLSR 74 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~----~~~~---------~~~~g~~~~~~i~~~i~~~~~~~~~~~ 74 (326)
++++|.+..++-..+..+|.++...+...+...... .++. ..+.||++.-.+.++.+++ ..+..+.
T Consensus 145 p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i-~~~~~~~ 223 (502)
T TIGR00887 145 TKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALL-ALYFRLT 223 (502)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHH-HHHHHHh
Confidence 568999999998888888887766655444332211 0000 0123788876444333333 3333334
Q ss_pred ecCCCc-----ccC-C------------------CC-------CcchhhhHHHHhhc---hhHHHHH----HHHHHHHHH
Q 020432 75 TEEPRL-----KMG-L------------------RG-------NSHARISWAYWFKK---ILYYQVA----LVYMLTRLV 116 (326)
Q Consensus 75 tkE~~~-----~~~-~------------------~~-------~~~~~~~l~~~~~N---~~~~~~~----~~~~~~~~~ 116 (326)
.+|.++ .++ + ++ +...+..+++++++ |+.+... ..++.....
T Consensus 224 lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (502)
T TIGR00887 224 IPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIA 303 (502)
T ss_pred CCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 566321 000 0 00 00011246666653 2221211 112222222
Q ss_pred HHHHHHHHHHHHHHHhcCCcccch----------h--hhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 117 VNVSQAYLAFYVINDLRMGQSAKA----------L--VPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 117 ~~~~~~~~~~Y~~~~l~~~~~~~~----------~--~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
......+.|++++. .|.++.... . ......++.+++.++..++.+|.|| |++++.+..+..++...
T Consensus 304 ~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gR-R~~l~~~~~~~~~~~~~ 381 (502)
T TIGR00887 304 FYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGR-KPIQLMGFFILTVLFFV 381 (502)
T ss_pred HHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc-hhHHHHHHHHHHHHHHH
Confidence 23344556777754 455322100 0 1122334556677778888989886 55555555544444333
Q ss_pred HhhcC-CcchhHHHHHHHHH-hhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhccc
Q 020432 185 ILILP-MNMSAFMYVLAIFV-GIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQS 256 (326)
Q Consensus 185 l~~~~-~~~~~~~l~~~~~~-g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~ 256 (326)
+.+.. +.+....++...+. .++..+.....|...+|..+.+.| |...|..+....++..++..+.+.+.+
T Consensus 382 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R--~~~~g~~~~~~~~~~~~~~~~~~~l~~ 453 (502)
T TIGR00887 382 LGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYR--STAHGISAASGKAGAIIGQFGFLYLAQ 453 (502)
T ss_pred HHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHH--HHHHHHHHHHhhhHHHHHHHHhhhhhc
Confidence 32211 11111111111111 111112345677888898888888 555788888899998888888887654
No 92
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.75 E-value=1.4e-07 Score=87.51 Aligned_cols=145 Identities=15% Similarity=0.047 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHH
Q 020432 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGI 185 (326)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l 185 (326)
+....++............|.|..+ .+.++...+.+.....+..+++.++++++.+|+|| |+.+..+..+..++....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~-r~~~~~~~~~~~~~~~~~ 81 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDR-KKVMIGADLIRAVLVAVL 81 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhch-hHHHHHHHHHHHHHHHHH
Confidence 3455666667777777788888766 45545556666667777888889999999999986 556666665544444333
Q ss_pred hhcC---CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 186 LILP---MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 186 ~~~~---~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+.+ ..+.+.+++...+.|++.+...+...++++|..++++| +..+|..+....+|..++..+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~g~~l~~~l 151 (365)
T TIGR00900 82 PFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQL--TQANSLSQAVRSLFYIVGPGIGGLM 151 (365)
T ss_pred HHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH--HHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 3322 12556777778888999998899999999999988766 5567888888888887777666654
No 93
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.74 E-value=3.6e-07 Score=85.34 Aligned_cols=145 Identities=12% Similarity=0.122 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHH
Q 020432 103 YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCG 182 (326)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~ 182 (326)
++.....++...........+.|+|+++.+|.++...+.+.....+...++.++.+++.+|+|+ |+.+..+.++..++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGP-RYTTTLSLLLLAIPC 81 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCc-hHHHHHHHHHHHHHH
Confidence 4445566777777777788899988999999877666777777788889999999999999986 556777776666665
Q ss_pred HHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 183 AGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 183 ~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
....+.++ +.+.+++..++.|++.+. .....++++|..+.++| |...+.......+|..++..+.+
T Consensus 82 ~~~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 82 LWAGLAVQ-SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQ--GTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred HHHHHHhh-hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhh--hHHHHHHHHHhHHHHHHHHHHHH
Confidence 55544331 455566666677777543 44556788888887666 55567777677777766655544
No 94
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.74 E-value=3.5e-07 Score=84.52 Aligned_cols=142 Identities=12% Similarity=0.127 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhh
Q 020432 108 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILI 187 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~ 187 (326)
+.+++............+.++.+.+|.++...+.+.....++..++.++.+++.+|+|+ |+.+..+.++.+++.....+
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~l~~~~~~~~~~~~~~~~ 81 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGR-RRVLIIGLLLFALGSLLLAF 81 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-H-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-eeeEeehhhhhhhHHHHhhh
Confidence 34556666666666677756666677666666777777778889999999999999986 55777777776666343333
Q ss_pred cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 188 LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 188 ~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
. .+.+.+++..++.|++.+...+...++++|..++++| +..++..+...-+|..++..+.+.+
T Consensus 82 ~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~g~~~g~~l~~~l 144 (352)
T PF07690_consen 82 A--SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEER--GRAFGILSAGFSLGSILGPLLGGFL 144 (352)
T ss_dssp H--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCH--HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred h--hhHHHHhhhccccccccccccccccccccccchhhhh--hhccccccchhhhhhhcccchhhhh
Confidence 2 3345777778899999999999999999999999776 4557888888888888887777764
No 95
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.73 E-value=1e-07 Score=93.03 Aligned_cols=164 Identities=9% Similarity=0.000 Sum_probs=103.0
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
+++..+++|..+...+..++.+........++.++.++.+|.++...+.+.....++.+++..+..+..||.+. |+++.
T Consensus 244 ~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~-r~~l~ 322 (468)
T TIGR00788 244 GLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPY-RLLFG 322 (468)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCH-HHHHH
Confidence 45566788887764443333122112222222234455677777767766666778888989998888888874 66666
Q ss_pred HhHHHHHHHHHHHh-hcC-------CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHh
Q 020432 173 AGGVLWVFCGAGIL-ILP-------MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSC 244 (326)
Q Consensus 173 ~~~~l~~~~~~~l~-~~~-------~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~ 244 (326)
.+.++.+++..... +.. ..+...++...++.+++.+...+....++.+.++.+.+ |..||..+...-+|.
T Consensus 323 ~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~e--gt~~al~~s~~~lg~ 400 (468)
T TIGR00788 323 VTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCE--SSVFALLASILHLGS 400 (468)
T ss_pred HHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCce--ehHHHHHHHHHHHHH
Confidence 66655444332211 110 01123444556677788777777778899999988766 778999999899998
Q ss_pred hHHHHhhhhcccCCC
Q 020432 245 GIAVYVLQSYQSMSP 259 (326)
Q Consensus 245 ~i~~~i~~~~l~~~~ 259 (326)
.++..+.+.+.+..|
T Consensus 401 ~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 401 SVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHcC
Confidence 888865555544444
No 96
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.69 E-value=3.6e-06 Score=86.26 Aligned_cols=105 Identities=14% Similarity=0.006 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC
Q 020432 145 IIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 224 (326)
Q Consensus 145 ~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~ 224 (326)
+..++.+++.++..++..|+|| |+.+..+.++++++++++.+.+. ...+++..++.+++.+......++.++|..+.
T Consensus 603 l~~l~~i~G~il~g~L~Dr~GR-r~~l~~~~~lsai~~ll~~~~~s--~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt 679 (742)
T TIGR01299 603 LGTLAVLPGNIVSALLMDKIGR-LRMLAGSMVLSCISCFFLSFGNS--ESAMIALLCLFGGLSIAAWNALDVLTVELYPS 679 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHcc--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCH
Confidence 4456778888889999988885 65666666666666555554432 23344445566776666777888999999998
Q ss_pred CCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 225 DLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 225 ~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+.| |..+|+.....++|..+|..+.+.+
T Consensus 680 ~~R--gta~Gi~~~~~rlGaiigp~i~g~L 707 (742)
T TIGR01299 680 DKR--ATAFGFLNALCKAAAVLGILIFGSF 707 (742)
T ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 5557899999999998888877754
No 97
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.69 E-value=4.4e-07 Score=86.17 Aligned_cols=151 Identities=15% Similarity=0.075 Sum_probs=107.0
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLW 178 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~ 178 (326)
.+|++..+.+..++...........++.|+++.+|.++...+.+.....+...++.++.+++.+|+|| |+.+..+.++.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~-r~~l~~~~~~~ 91 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGP-KKAVVFGLCGC 91 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCC-cchHHHHHHHH
Confidence 46777777888888888888888999999998888766666777777778888999999999999996 55667666555
Q ss_pred HHHHHHHhhc--CCc----chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 179 VFCGAGILIL--PMN----MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 179 ~~~~~~l~~~--~~~----~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.++.....+. ..+ +...+++..++.|+|.+...+...+.++|..++++| |...+......-+|..++..+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~l~~ 169 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHT--GRVISWNGIATYGALAIGAPLGV 169 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhh--ccchhhhhhhhhHHHHHHHHHHH
Confidence 4443333221 111 223455666788899888888888888999987766 44456666665555555444433
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.67 E-value=1.2e-06 Score=86.38 Aligned_cols=154 Identities=10% Similarity=0.046 Sum_probs=103.6
Q ss_pred hch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh-cccchhhhhHhHH
Q 020432 99 KKI-LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT-GQRLKAYYSAGGV 176 (326)
Q Consensus 99 ~N~-~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~-~gkkk~~~~~~~~ 176 (326)
|+| .++..+...++..........+++.|+++.+|.++.....+............++.+++++| +|+ |+++..+.+
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~-r~~~~~g~~ 96 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGT-KRVIMLGAI 96 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-HHHHHHHHH
Confidence 555 57777777888888888899999999999998865433332222222223334577889988 585 666777776
Q ss_pred HHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-CCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 177 LWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-LSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 177 l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
+..++..++.+.+ ++...+++...+.|+|.|...+...++++|..+++ +|+++ .++.+.+...+|..+|..+.+++.
T Consensus 97 ~~~ig~~l~~~~~-~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~-~~~~~~~~~~iG~~~gp~i~g~l~ 174 (500)
T PRK09584 97 VLAIGYALVAWSG-HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDG-AFTMYYMSINIGSFFSMLATPWLA 174 (500)
T ss_pred HHHHHHHHHHHhc-ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhh-cchHHHHHHHHHHHHHHHHHHHHH
Confidence 6655544444322 33334445556678888877777788999998764 33344 367888888999888888887764
No 99
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.66 E-value=1.7e-06 Score=84.91 Aligned_cols=156 Identities=13% Similarity=0.144 Sum_probs=94.9
Q ss_pred HhhchhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCcccc----hhhhHHHHHHHHHHHHHHHHHHHhcccchh-
Q 020432 97 WFKKILYYQVAL--VYMLTRLVVNVSQAYLAFYVINDLRMGQSAK----ALVPAIIYICSFIVSILLQEMAWTGQRLKA- 169 (326)
Q Consensus 97 ~~~N~~~~~~~~--~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~----~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~- 169 (326)
.+|||.+....+ ...+.+.........++.|.+++.++..... ..+.....+..++.+++..++.+|.+||+.
T Consensus 263 ~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~ 342 (489)
T PRK10207 263 TGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKD 342 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 445555543222 2344455555555777888886555421111 112122224455666777777766665431
Q ss_pred -----hhhHhHHHHHHHHHHH-----hhcC---CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 170 -----YYSAGGVLWVFCGAGI-----LILP---MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 170 -----~~~~~~~l~~~~~~~l-----~~~~---~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
-+..|.++..++.+.+ .+.. ..+.+++....++.|+|.+...+...++..+.++.+.+ |...|++
T Consensus 343 ~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~--g~~~g~~ 420 (489)
T PRK10207 343 LSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM--GFILGMW 420 (489)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH--HHHHHHH
Confidence 2455555544444322 1211 12345566677888999999999999999999888665 7778999
Q ss_pred HHHHHHHhhHHHHhhhhc
Q 020432 237 SFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 237 sf~~Kl~~~i~~~i~~~~ 254 (326)
.+.+-+|..+|+.+.+.+
T Consensus 421 ~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998887754
No 100
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.65 E-value=7.5e-07 Score=83.60 Aligned_cols=155 Identities=10% Similarity=-0.043 Sum_probs=98.1
Q ss_pred HHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCCCcchh-hhHHHHhhc
Q 020432 22 FTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRGNSHAR-ISWAYWFKK 100 (326)
Q Consensus 22 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~~~~~~-~~l~~~~~N 100 (326)
..++|.-+...+.|++....+ + ..|+.++.++.+..++..+..++.+++.++.+.+ +.+.+ .+++..++|
T Consensus 147 ~GN~G~av~q~~~P~v~~~~g-----~--~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~--~~~~~~~~~~~v~~~ 217 (417)
T COG2223 147 AGNLGVAVAQLVAPLVAVAFG-----F--LAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRAS--VKPQLPAQLKAVFSN 217 (417)
T ss_pred cccccHHHHHHHHHHHHHHHh-----h--HHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhcc--ccccchhHHHHHhcC
Confidence 345555555666666665432 1 1477777777776666666666677775543222 12223 789999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHH
Q 020432 101 ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVF 180 (326)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~ 180 (326)
|+.|.+++.|+.++-+.-....++|.|++++.+.++.....+.....+..-+.=+..++++.|+|.+|.++.. ...+++
T Consensus 218 ~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~-f~~~~~ 296 (417)
T COG2223 218 KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAV-FVGMAL 296 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHH-HHHHHH
Confidence 9999999999999999999999999999999998653322222222222223335566889888765554433 334444
Q ss_pred HHHHHh
Q 020432 181 CGAGIL 186 (326)
Q Consensus 181 ~~~~l~ 186 (326)
+...+.
T Consensus 297 ~~~~l~ 302 (417)
T COG2223 297 AAALLS 302 (417)
T ss_pred HHHHHH
Confidence 444333
No 101
>PRK10054 putative transporter; Provisional
Probab=98.63 E-value=1.3e-06 Score=83.38 Aligned_cols=148 Identities=6% Similarity=-0.013 Sum_probs=102.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHH
Q 020432 102 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC 181 (326)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~ 181 (326)
.++.+.+..++...+......+++.|+++.+|.++...+.......+..++..++.+++++|+|| |+.+..+..+..++
T Consensus 8 ~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~-k~~~~~~~~~~~~~ 86 (395)
T PRK10054 8 STSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDK-KRYMLLAITAFASG 86 (395)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc-chhHHHHHHHHHHH
Confidence 35555667777788888888899999998888866666666666667778888899999999986 55566666554444
Q ss_pred HHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 182 GAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 182 ~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+.+.+.+ +.+..++...+.|.+.+...+...+..+|..+.++| +..+|.......+|.+++..+.+.+
T Consensus 87 ~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~lg~~igp~l~~~l 155 (395)
T PRK10054 87 FIAIPLVN--NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSK--TKIFSLNYTMLNIGWTVGPPLGTLL 155 (395)
T ss_pred HHHHHHHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443332 333334344455556666667788888999887666 4456788888888888887766654
No 102
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.60 E-value=6.1e-06 Score=80.76 Aligned_cols=146 Identities=11% Similarity=0.114 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc----chhhhHHHHHHHHHHHHH----HHHHHHhcccchhh--hhHhH
Q 020432 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSA----KALVPAIIYICSFIVSIL----LQEMAWTGQRLKAY--YSAGG 175 (326)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~----~~~~~~~~~i~~~i~~~~----~~~l~k~~gkkk~~--~~~~~ 175 (326)
+.+..++.+.......+.++.|.+++.+.+... ...+.....+..++..++ ++++.||....+.. +.+|.
T Consensus 277 l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~ 356 (475)
T TIGR00924 277 LFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGM 356 (475)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHH
Confidence 334444555555556677788887776543111 122323333333444444 33444442111221 24556
Q ss_pred HHHHHHHHHHhhc-------CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 176 VLWVFCGAGILIL-------PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 176 ~l~~~~~~~l~~~-------~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
++..++...+.+. .+.+.++..+..++.++|.....+..++++.|..+++.| |.+.|.+.+..-+|..+++
T Consensus 357 ~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~--g~~~g~~~l~~~~g~~l~~ 434 (475)
T TIGR00924 357 LFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLM--GQMLGMWFLAQAMGSLLGG 434 (475)
T ss_pred HHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 5554444443321 123566777788899999999999999999999998887 7788899888777777776
Q ss_pred Hhhhh
Q 020432 249 YVLQS 253 (326)
Q Consensus 249 ~i~~~ 253 (326)
.+...
T Consensus 435 ~~~~~ 439 (475)
T TIGR00924 435 YLATF 439 (475)
T ss_pred HHHHH
Confidence 66654
No 103
>PRK12382 putative transporter; Provisional
Probab=98.60 E-value=1.4e-06 Score=82.59 Aligned_cols=152 Identities=16% Similarity=0.171 Sum_probs=105.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
|+.++.+....++..+........+|.|+++.+|.++...+.......+...++.++++++.+|+|| |+.+..+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~-r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGA-KRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcc-hHHHHHHHHHHH
Confidence 5555555556666677777777888889988888877667777777788888889999999999996 556666665544
Q ss_pred HHHHHH---hhcC---CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 180 FCGAGI---LILP---MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 180 ~~~~~l---~~~~---~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
++.... .+.+ ..+...+++...+.|+|.+...+...+.++|.+++++| |...|.++...-.+..++..+.+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~a~~~~~~~~~~g~~~g~~~~~~ 170 (392)
T PRK12382 93 LAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHS--GKVMSWNGMAMYGALAAGAPLGLL 170 (392)
T ss_pred HHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccc--chhhhHHHHHHHHHHHHHHHHHHH
Confidence 433221 1112 12345566667788898888777778888999988777 555677777666666666555444
Q ss_pred c
Q 020432 254 Y 254 (326)
Q Consensus 254 ~ 254 (326)
+
T Consensus 171 l 171 (392)
T PRK12382 171 L 171 (392)
T ss_pred H
Confidence 3
No 104
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.59 E-value=2.4e-06 Score=83.64 Aligned_cols=151 Identities=11% Similarity=0.041 Sum_probs=108.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcCCcccchhhhHHHHHHHHHHHHHHHHHHHh-cccchhhhhHhHHH
Q 020432 101 ILYYQVALVYMLTRLVVNVSQAYLAFYVIND--LRMGQSAKALVPAIIYICSFIVSILLQEMAWT-GQRLKAYYSAGGVL 177 (326)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~--l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~-~gkkk~~~~~~~~l 177 (326)
|.++.+....++...+......+++.|+++. +|.++...+.+.....+...++.++.++++.| +|+ |++...+..+
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~-~~~l~~~~~~ 88 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGT-KKTMVLGGIV 88 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcch-HHHHHHHHHH
Confidence 3344455566667788888899999999887 77765555666666677788888999999876 785 6667777766
Q ss_pred HHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC-CCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 178 WVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL-SGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~-r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+++...+.+. ++.+.+++...+.|+|.|...+...++++|..++++ ++.+..++.+.....+|..+|..+.+++
T Consensus 89 ~~~g~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l 164 (475)
T TIGR00924 89 LMLGHFMLAMS--IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVI 164 (475)
T ss_pred HHHHHHHHHhc--ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHH
Confidence 66555544432 233445555567788888877888899999997643 1223458899999999999998887765
No 105
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.58 E-value=9.1e-07 Score=86.87 Aligned_cols=153 Identities=8% Similarity=-0.002 Sum_probs=107.3
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh-cccchhhhhHhHHH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT-GQRLKAYYSAGGVL 177 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~-~gkkk~~~~~~~~l 177 (326)
+.|+++.++...+..+.......++++.|+++.+|.++.....+.........+..++.+++++| +|+ |+++..+.++
T Consensus 12 ~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~-r~~~~~g~~~ 90 (489)
T PRK10207 12 QPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGT-KRTIVLGAIV 90 (489)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccch-HHHHHHHHHH
Confidence 34556666677788888999999999999999998765444444433444445555678899987 885 6678888887
Q ss_pred HHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC-CCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 178 WVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL-SGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~-r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+.++...+.+.+ +....+++...+.|+|.|...+...++++|..++++ |+++ .++.+.+..-+|..+|..+.+++
T Consensus 91 ~~~g~~~~~~~~-~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~-~~~~~~~~~nig~~~g~~l~g~l 166 (489)
T PRK10207 91 LAIGYFMTGMSL-LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDG-AFTLFYMSINIGSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHhc-cchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhc-chhHHHHHHHHHHHHHHHHHHHH
Confidence 777665555432 323334455566788888887778899999997754 3343 48889999988887776655544
No 106
>TIGR00895 2A0115 benzoate transport.
Probab=98.58 E-value=1.9e-06 Score=80.82 Aligned_cols=131 Identities=7% Similarity=-0.026 Sum_probs=92.8
Q ss_pred HHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHH
Q 020432 119 VSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYV 198 (326)
Q Consensus 119 ~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~ 198 (326)
....+.|++. ..+|.++...+.+.....++.+++.++.+++.+|+|| |+.+..+..+..++...+.+. ++.+..++
T Consensus 35 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 110 (398)
T TIGR00895 35 AMGFAAPAIS-AEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGR-KRVLLWSILLFSVFTLLCALA--TNVTQLLI 110 (398)
T ss_pred HHHhhHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHc--cchHHHHH
Confidence 3344445444 4456555455566666677788888999999998885 556666665555554444433 34555666
Q ss_pred HHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 199 LAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 199 ~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
...+.|++.+...+..+++++|..+.++| +...+.......+|..++..+.+.+.
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l~ 165 (398)
T TIGR00895 111 LRFLAGLGLGGLMPNLNALVSEYAPKRFR--GTAVGLMFCGYPIGAAVGGFLAGWLI 165 (398)
T ss_pred HHHHHhcccccchhhHHHHHHHHcCHHhh--chhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 77788898888888999999999987666 55678899999999888888777654
No 107
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.57 E-value=1.4e-06 Score=86.13 Aligned_cols=154 Identities=14% Similarity=0.084 Sum_probs=107.7
Q ss_pred HhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHH
Q 020432 97 WFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGV 176 (326)
Q Consensus 97 ~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~ 176 (326)
-+|||.|+.+.....+++++..+.....+.|+.. +..++...+.+.....+..++.+++.+.++.|++| |+.++.+-+
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~dr-rrili~~~~ 83 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDR-RRILILSQL 83 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-hHHHHHHHH
Confidence 4789999998888899998888877777766544 44345556666667777888888899999999986 445555444
Q ss_pred HHHHHHHH---HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 177 LWVFCGAG---ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 177 l~~~~~~~---l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
+..+.... +......+++.+++..++.|.+.+...+.-.+++||++++++-..+ .|.++....++..+|.++-|.
T Consensus 84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A--~al~s~~~niar~iGPalgG~ 161 (524)
T PF05977_consen 84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAA--NALNSISFNIARIIGPALGGI 161 (524)
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHH--HHHHHHHHHHHHhccchHHHH
Confidence 43322222 2222334567788888999999999999999999999998653333 356666666665555444444
Q ss_pred c
Q 020432 254 Y 254 (326)
Q Consensus 254 ~ 254 (326)
+
T Consensus 162 L 162 (524)
T PF05977_consen 162 L 162 (524)
T ss_pred H
Confidence 3
No 108
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.56 E-value=1.5e-06 Score=81.49 Aligned_cols=150 Identities=10% Similarity=0.044 Sum_probs=102.0
Q ss_pred hchhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHH
Q 020432 99 KKILYYQVA-LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVL 177 (326)
Q Consensus 99 ~N~~~~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l 177 (326)
||+++.... ...++.....+......|.+. ..+|.++...+.+.....++..++.++++++.+|+|| |+.+..+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~-r~~~~~~~~~ 79 (385)
T TIGR00710 2 SAKAFALLLGCLSILGPLGIDMYLPAFPEIA-ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGR-RPVLLLGLFI 79 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC-hHHHHHHHHH
Confidence 455554443 333444445455555566554 4567666556666667777888889999999999986 5566666666
Q ss_pred HHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 178 WVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
..++.....+. ++.+..++..++.|++.+...+...++++|..++++| +..++.......++..++..+.+.+
T Consensus 80 ~~~~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~g~~~~~~l 152 (385)
T TIGR00710 80 FALSSLGLALS--NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEEL--SRIYSILMPVLALAPAVAPLLGGYI 152 (385)
T ss_pred HHHHHHHHHHH--ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555544443 3455666677788999988888899999999987666 5557777777778777776666644
No 109
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.55 E-value=2.7e-06 Score=81.30 Aligned_cols=146 Identities=13% Similarity=0.073 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHH
Q 020432 104 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGA 183 (326)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~ 183 (326)
+.+....++...+......+.+.|++..+|.++...+.......+...+..++.+++.+|.|+ |+....+..+..++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~-k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGA-KPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCc-hHHHHHHHHHHHHHHH
Confidence 344556677777777788888889988888766556666666666667777888999999886 5667777766655555
Q ss_pred HHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 184 GILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 184 ~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+.+. ++.+.+++...+.|++.+...+...++++|.++.++| |...|.......+|..+|..+.+++
T Consensus 92 ~~~~~--~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~g~~ig~~l~g~l 158 (400)
T PRK11646 92 TMAIA--HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQR--GRFFSLLMMQDSAGAVIGALLGSWL 158 (400)
T ss_pred HHHHh--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44432 3456666677778888877777888899999987766 4457888889999988887777765
No 110
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.53 E-value=1.9e-06 Score=82.67 Aligned_cols=158 Identities=9% Similarity=0.087 Sum_probs=97.6
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhH
Q 020432 96 YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGG 175 (326)
Q Consensus 96 ~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~ 175 (326)
..+|||.++.+.+.+++.+.+......+++.|.++++|.++...+.+.....++..++.++++++.+|+|+ |+....+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~-r~~~~~~~ 83 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGL-KKHLLWII 83 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-hHHHHHHH
Confidence 35678888888888888888888889999999999888876666777777788889999999999999996 44444433
Q ss_pred HHHHHHHHHHhhcCCcch-h-HHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 176 VLWVFCGAGILILPMNMS-A-FMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 176 ~l~~~~~~~l~~~~~~~~-~-~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
.+..+....++....... . ..+....+.++..+........++.+..++..|+.|..++.......+|.+++..+.+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 163 (420)
T PRK09528 84 SGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGI 163 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHH
Confidence 332222221111110000 0 11111122233333333333334445544333444777787777778888888777665
Q ss_pred c
Q 020432 254 Y 254 (326)
Q Consensus 254 ~ 254 (326)
+
T Consensus 164 l 164 (420)
T PRK09528 164 L 164 (420)
T ss_pred H
Confidence 4
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.51 E-value=3.2e-06 Score=82.77 Aligned_cols=151 Identities=12% Similarity=0.042 Sum_probs=99.4
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc-ccchhhhhHhHHH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG-QRLKAYYSAGGVL 177 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~-gkkk~~~~~~~~l 177 (326)
+.|.++..+...+..+........+++.|+++.+|.++.....+.........++.++.+++++|. |+ |+.+..+.++
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGr-rr~iliG~il 85 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGN-RMAVMLGALL 85 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCc-HHHHHHHHHH
Confidence 455666666777778888888999999999998888765555555555566677788889999887 85 5667777766
Q ss_pred HHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC-CCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 178 WVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED-LSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 178 ~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~-~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
..++..++.. ++.+....++...+..+|.|...+...++++|..+++ .|++. -++.......+|..++..+.+
T Consensus 86 ~~lg~lll~~-~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~s-gf~i~Y~~~nlG~~iap~l~g 159 (493)
T PRK15462 86 MAIGHVVLGA-SEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDG-GFSLMYAAGNVGSIIAPIACG 159 (493)
T ss_pred HHHHHHHHHH-hhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccc-eehHHHHHHHHHHHHHHHHHH
Confidence 5555443332 2222222333334444666666566678999999764 34433 377777777787665554443
No 112
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.48 E-value=6.5e-06 Score=80.02 Aligned_cols=144 Identities=8% Similarity=-0.030 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
.+++..++........+...|.+.++ +|.++...+.+.....++..++.++.+++.+|+|| |+.+..+.++..++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGT-RRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCc-HHHHHHHHHHHHHHHHH
Confidence 33445555566666667777776554 56555555666667778888999999999999985 66677777665555444
Q ss_pred HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 185 ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 185 l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
..+. ++...+++..++.|++.+...+...++++|..+.++| |...+.+.....++..++..+.+++
T Consensus 84 ~~~~--~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~g~~~~~~l 149 (485)
T TIGR00711 84 CGVA--PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKR--GRAMAIWGLTVLVAPALGPTLGGWI 149 (485)
T ss_pred HhCc--CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHhhhhhccHhHh
Confidence 4432 3456667777888999998889999999999987776 5557788888888877777666654
No 113
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.47 E-value=3.4e-06 Score=90.90 Aligned_cols=158 Identities=12% Similarity=0.053 Sum_probs=106.7
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 95 AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS--AKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 95 ~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~--~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
+..++|+.|+......++..+...........++.+..+.+.. ..+++..+..++.+++++++++++.|+|| |+.+.
T Consensus 3 ~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~gr-k~~l~ 81 (1146)
T PRK08633 3 KNLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSK-NRVIR 81 (1146)
T ss_pred cchhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccH-HHHHH
Confidence 4567889988877666666665555544444455544444322 23444555666778888999999999996 55666
Q ss_pred HhHHHHHHHHHHHhhc-CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhh
Q 020432 173 AGGVLWVFCGAGILIL-PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 173 ~~~~l~~~~~~~l~~~-~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
.+.++.++..++..+. ..++.+.+++..++.|++.+...+...++++|.++.++| |...|..+....+|..+|..+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~ig~~lg~~l~ 159 (1146)
T PRK08633 82 IVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENL--SRANGLLEAFTIVAILAGTALF 159 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccc--hhhhhHHHHHHHHHHHHHHHHH
Confidence 6554433332222211 123456677777888999998889999999999998777 5568888888888888887776
Q ss_pred hhcc
Q 020432 252 QSYQ 255 (326)
Q Consensus 252 ~~~l 255 (326)
+++.
T Consensus 160 ~~l~ 163 (1146)
T PRK08633 160 SFLF 163 (1146)
T ss_pred HHHH
Confidence 6554
No 114
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.47 E-value=2.8e-06 Score=80.99 Aligned_cols=146 Identities=9% Similarity=0.011 Sum_probs=100.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
||.|+.+....++..+.........+.+ .+.++.++...+.+.....+...+..++.+++++|+|| |+.+..+..+..
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~gr-r~vl~~~~~~~~ 79 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPK-GRVMFIANGIKL 79 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCC-chhhHHHHHHHH
Confidence 6777777777777777655555555544 45666555555666666777888888999999999996 667777776655
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.+...+.+ ++ ++..++.|++.+...+...++++|.+++++| +-..|.++...-++..+|..+.|.+
T Consensus 80 ~~~~~~~~~~--~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~--~~a~~~~~~~~~~~~~~Gp~lgG~l 147 (393)
T PRK11195 80 LGCLLMLFGI--HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKL--VKANGWMEGSTIAAILLGTVLGGAL 147 (393)
T ss_pred HHHHHHHHHH--HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5444433321 11 4445678999999999999999999998777 3446777777777766776666654
No 115
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.47 E-value=5e-06 Score=77.83 Aligned_cols=146 Identities=12% Similarity=0.006 Sum_probs=90.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHh
Q 020432 107 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGIL 186 (326)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~ 186 (326)
++.+++..+........++.|++..+|.++...+.+.....+..++..++++++.+|+||||.....+..+..++.....
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~ 82 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFA 82 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHH
Confidence 34567777777778888898988888876655566555566667777888889998988655444444433333333333
Q ss_pred hcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 187 ILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 187 ~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+ . ++.+.+++...+.|.+.+...+...++..|..+++.|..++.++......-+|..++..+.+..
T Consensus 83 ~-~-~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l 148 (375)
T TIGR00899 83 W-N-RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL 148 (375)
T ss_pred h-c-chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH
Confidence 2 2 3344455555556665556667777788887766555433334555555556666665555543
No 116
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.47 E-value=4.8e-06 Score=89.83 Aligned_cols=157 Identities=13% Similarity=0.028 Sum_probs=104.1
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----ccchhhhHHHHHHHHHHHHHHHHHHHhcccchh
Q 020432 95 AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ-----SAKALVPAIIYICSFIVSILLQEMAWTGQRLKA 169 (326)
Q Consensus 95 ~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~-----~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~ 169 (326)
+.+++|+.|+.+....++..+..+.....+..+..|.+.... ...++...+..+..++.++++++++.|++| |+
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~r-k~ 83 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDK-AK 83 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccH-HH
Confidence 457889999887777777776655444444444444443221 123444445666778888899999999996 44
Q ss_pred hhhH--hHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 170 YYSA--GGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 170 ~~~~--~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
++.. ...+.......+.+.. .+.+.+++..++.|++.+...+...++++|.++.+++ +...|..+...-+|..+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~-~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~--~~a~~~~~~~~~ig~~ig 160 (1140)
T PRK06814 84 LAKILKFAEIGIAALAIYGFHL-NSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDEL--LGANALVEAGTFIAILLG 160 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcccc--chhhHHHHHHHHHHHHHH
Confidence 3322 1111111111222221 4567788888899999999999999999999998776 445788999999998888
Q ss_pred HHhhhhcc
Q 020432 248 VYVLQSYQ 255 (326)
Q Consensus 248 ~~i~~~~l 255 (326)
..+.|++.
T Consensus 161 p~l~g~l~ 168 (1140)
T PRK06814 161 TIIGGLAT 168 (1140)
T ss_pred HHHHHHHH
Confidence 88887764
No 117
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.45 E-value=5.5e-06 Score=79.47 Aligned_cols=142 Identities=14% Similarity=0.118 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHh
Q 020432 107 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGIL 186 (326)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~ 186 (326)
.+.|++...-....+...+ +++..+|.++...+.+.....++..++.++.+++.+|+|+ |+.+..+.+++.++.....
T Consensus 14 ~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~-r~~~~~~~~~~~~~~~~~~ 91 (412)
T TIGR02332 14 FILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGA-RRWIAGIMVLWGIASTATM 91 (412)
T ss_pred HHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCh-HHHHHHHHHHHHHHHHHHH
Confidence 3444544444444444455 6778888766666666667777788888889999999996 5566776766655555444
Q ss_pred hcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 187 ILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 187 ~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+. ++...+++.-.+.|++.+...+...++++|..+.++| |...+......-+|..++..+.++.
T Consensus 92 ~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r--g~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 92 FA--TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFR--ARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred Hh--cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 42 3456677777889999998888888888999887666 4556777766667776666666654
No 118
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.44 E-value=2.1e-05 Score=72.84 Aligned_cols=196 Identities=11% Similarity=0.161 Sum_probs=122.3
Q ss_pred ccchhhhhHHHHHHHHHhhhheee-ecCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 51 NQYRWIAYSSIFIGCCFVGIFLSR-TEEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVI 129 (326)
Q Consensus 51 ~g~~~~~~i~~~i~~~~~~~~~~~-tkE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 129 (326)
.||+..-...+..+++..+++.-- .||+ .+..+ .| ...-+.++|||.-+.+.+.+=+.....+...+++|-++.
T Consensus 162 ~gW~~aL~~WAl~allAl~~WlPq~~r~~-~~~~~-~~---~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili 236 (395)
T COG2807 162 GGWRGALGFWALLALLALLIWLPQALREQ-AASIA-TK---LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILI 236 (395)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhhccccc-ccccc-cc---cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 367766666666666655554433 4553 11111 11 122356789998888777666778888888899999987
Q ss_pred HHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHH
Q 020432 130 NDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANAL 209 (326)
Q Consensus 130 ~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~ 209 (326)
+. |.+....+.......+..+...+..|.+.+|...+|...........++.+.+.+.|.+++. .. ..+.|+|.|.
T Consensus 237 ~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~-lw--~~llG~G~G~ 312 (395)
T COG2807 237 DR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPI-LW--ALLLGLGQGG 312 (395)
T ss_pred Hc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHH-HH--HHHHhCccch
Confidence 75 44444445555566778888889999887654445665555555555566666666644332 22 4788999988
Q ss_pred HHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHh---hHHHHhhhhcccCCC
Q 020432 210 MMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSC---GIAVYVLQSYQSMSP 259 (326)
Q Consensus 210 ~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~---~i~~~i~~~~l~~~~ 259 (326)
+..+....+.|=.++-++. .+...|.+-+|- +.|..+.|+..+..|
T Consensus 313 ~F~laL~li~~rs~~a~~A----a~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 313 AFPLALTLILLRSSDAAIA----AALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred HHHHHHHHHHhhcCChHHH----HHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 8888877777665542221 334555555553 666677777654443
No 119
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.43 E-value=5.1e-06 Score=79.76 Aligned_cols=150 Identities=13% Similarity=0.071 Sum_probs=103.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHH
Q 020432 101 ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVF 180 (326)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~ 180 (326)
.++..++..++...+.........|.+ ++.+|.++...+.+.....++.+++++..+++.+|+|+ |++...+..++++
T Consensus 3 ~~~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~-r~~~~~g~~l~~~ 80 (410)
T TIGR00885 3 IPFALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSY-KAGILLGLFLYAL 80 (410)
T ss_pred cHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-hHHHHHHHHHHHH
Confidence 355555555665555555555666655 77888876666777777788889999999999999996 6677777777666
Q ss_pred HHHHHhhcC-CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 181 CGAGILILP-MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 181 ~~~~l~~~~-~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+..++...+ .++.+..++..++.|+|.+.........+++..++++|. .-.+.......+|..++..+.+.+
T Consensus 81 g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 81 GAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTAT--RRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655443322 234556667778889999998888888888888765542 224566667777777776665544
No 120
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.42 E-value=2.9e-06 Score=78.96 Aligned_cols=136 Identities=10% Similarity=0.055 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcC
Q 020432 110 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILP 189 (326)
Q Consensus 110 ~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~ 189 (326)
|++.+......+...|+ +++.+|.++...+.+.....++..++.++.+++.+|+|| |+.+..+..+..++.++..+.+
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~~ 81 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNP-RVFLPIGLILCAIVNLFFGFST 81 (379)
T ss_pred hhHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCC-eehhHHHHHHHHHHHHHHHHhh
Confidence 44445555555555664 556677766556666667777888889999999999986 5567777766555555544433
Q ss_pred CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhh
Q 020432 190 MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 190 ~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
+.+.+++...+.|++.+...+...++++|..++++| +...+..+....+|..++..+.
T Consensus 82 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~ 139 (379)
T TIGR00881 82 --SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSER--GTWVSFWNCSHNVGGGLLPPLV 139 (379)
T ss_pred --hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhh--eeeEeehhccchhHHHHHHHHH
Confidence 456666777788888888888889999999988777 5667888888888887777433
No 121
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.41 E-value=8.2e-06 Score=77.36 Aligned_cols=149 Identities=11% Similarity=0.046 Sum_probs=91.2
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAY---LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGG 175 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~---~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~ 175 (326)
|||+++.+.+..............+ +|.+ ...+|.++...+.......++..++.++++++.+|+|| |+.+..+.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~gr-r~~~~~~~ 80 (394)
T PRK11652 3 RQRNVNLLFMLVLLVAVGQMAQTIYVPAIADM-ARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGR-RPVILVGM 80 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhccHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCC-hHHHHHHH
Confidence 5677776655444444433333333 3444 45567665556666667778888889999999999986 55666666
Q ss_pred HHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 176 VLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 176 ~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
.+..++.....+. ++.+.+++...+.|++.+.......++.+|..+.+++ +...+..+...-++..++..+.+.
T Consensus 81 ~~~~~~~~~~~~~--~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~i~~~ 154 (394)
T PRK11652 81 SIFILGTLVALFA--HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQL--RHANSLLNMGILVSPLLAPLIGGL 154 (394)
T ss_pred HHHHHHHHHHHHH--ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655554444432 3455666777788888877777777788887665443 222344444444444444444444
No 122
>PRK11043 putative transporter; Provisional
Probab=98.41 E-value=1.4e-05 Score=75.87 Aligned_cols=138 Identities=18% Similarity=0.129 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHHHHH--HHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcC
Q 020432 112 LTRLVVNVSQAYLAFY--VINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILP 189 (326)
Q Consensus 112 ~~~~~~~~~~~~~~~Y--~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~ 189 (326)
+..........+.|.+ ++..+|.++...+.......++..++.++++++.+|+|| |+.+..+..+..++.....+.
T Consensus 14 ~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~- 91 (401)
T PRK11043 14 LSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGR-KPVLLAGLSLFALGSLGMLWV- 91 (401)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCC-cHHHHHHHHHHHHHHHHHHHh-
Confidence 3444444455666665 556777766666666667777888899999999999986 555666665555444444433
Q ss_pred CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 190 MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 190 ~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.+.+++...+.|+|.+.......++++|..+.+++. + .++.......++..++..+.+.+
T Consensus 92 -~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~g~~i~~~l 153 (401)
T PRK11043 92 -ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKAN-R-VFATIMPLVALSPALAPLLGAWL 153 (401)
T ss_pred -cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHH-H-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555666667778887777777778888887765442 2 24454445556666666555544
No 123
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.40 E-value=2.5e-06 Score=79.54 Aligned_cols=129 Identities=10% Similarity=-0.028 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHH
Q 020432 120 SQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVL 199 (326)
Q Consensus 120 ~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~ 199 (326)
.....|+ +++.+|.++...+.+.....++.+++.++++++.+|+|| |+.+..+.++..++.....+.+ +.+.+++.
T Consensus 13 ~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 88 (399)
T TIGR00893 13 LSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGA-RKTLAVFIVIWGVFTGLQAFAG--AYVSLYIL 88 (399)
T ss_pred hhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCc-ceeeHHHHHHHHHHHHHHHHHc--CHHHHHHH
Confidence 3344444 566677766656677777778888999999999999986 5556666666555555444433 56677777
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 200 AIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 200 ~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.++.|++.+...+...++++|..++++| +...+......-+|..++..+.+.+
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~l 141 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASER--ATAVSIFNSAQGLGGIIGGPLVGWI 141 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHH--HHHHHHHHHhchHHHHHHHHHHHHH
Confidence 8889999998889999999999987766 4557777888888877777766654
No 124
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.40 E-value=1.1e-05 Score=76.11 Aligned_cols=144 Identities=12% Similarity=0.003 Sum_probs=100.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
...+.++.............+.+ +..+|.++...+.+.....++..++.++.+++.+|+|| |+.+..+.++..++...
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~-r~~~~~~~~~~~~~~~~ 93 (405)
T TIGR00891 16 AAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGR-RLPMVTSIVLFSAGTLA 93 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHH
Confidence 33455555555555555566644 56677766556666667778889999999999999996 55666666665555544
Q ss_pred HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 185 ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 185 l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
..+. ++.+.+++...+.|++.+...+...+++.|..++++| +...+......-+|..++..+.+.+
T Consensus 94 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 94 CGFA--PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLR--NKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHh--ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhh--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 3455667777888999988888889999999988766 4557777777777777776665544
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.39 E-value=1.4e-05 Score=75.95 Aligned_cols=153 Identities=8% Similarity=0.017 Sum_probs=87.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
|+|.....+..++..+.......+.+.|.++.+|.++...+.......+...+.++++....+|.|+||.....+.++..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~ 93 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGV 93 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHH
Confidence 77777777778888888888889999999998887655444443323333333334443337777765544444444433
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.....+. ++.+.+++...+.+...+...+...++.+|..+++.|+.+.+.+......-+|..++..+.+.+
T Consensus 94 ~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 94 LACTLFAWN--RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHh--hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 333322222 2333333343444433344556666777776665545434434555556667777776666654
No 126
>PRK03545 putative arabinose transporter; Provisional
Probab=98.37 E-value=1.2e-05 Score=76.29 Aligned_cols=125 Identities=12% Similarity=0.042 Sum_probs=84.7
Q ss_pred HHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHH
Q 020432 123 YLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIF 202 (326)
Q Consensus 123 ~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~ 202 (326)
..|. +..++|.++...+.......+...++.++++++.+|+|| |+.+..+..+..++.+...+. ++.+.+++...+
T Consensus 31 ~~~~-l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~~ 106 (390)
T PRK03545 31 LLSD-IAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVER-RKLLIGLFVLFIASHVLSALA--WNFTVLLISRIG 106 (390)
T ss_pred chHH-HHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh-HHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHH
Confidence 3444 455677766555665556666677777888899999996 566777776655555554443 345666666677
Q ss_pred HhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 203 VGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 203 ~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
.|++.+...+...++++|..+.++| |...|......-++..++..+.+.
T Consensus 107 ~G~~~~~~~~~~~~~i~~~~~~~~r--~~~~g~~~~~~~~g~~ig~~l~~~ 155 (390)
T PRK03545 107 IAFAHAIFWSITASLAIRVAPAGKK--AQALSLLATGTALAMVLGLPLGRV 155 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCChhhh--hhHHHHHHHHHHHHHHHHhhHHHH
Confidence 7888877778888999999987776 555666666666666666555544
No 127
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.37 E-value=1.4e-05 Score=75.90 Aligned_cols=150 Identities=8% Similarity=0.034 Sum_probs=95.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
||+++.....+++.+........+++.|.++.+|.++...+.+.....+...++.++++++++|.|| |+.+..+.....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~gr-r~~~~~~~~~~~ 79 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGL-KKHLLWIISGLL 79 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHH
Confidence 6888888888999999999999999999999888766666666677788889999999999999986 444554443333
Q ss_pred HHHHHHh--hcCCc---ch-hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 180 FCGAGIL--ILPMN---MS-AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 180 ~~~~~l~--~~~~~---~~-~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
+....++ ...+. +. ...++..++.|++.+...+...++.+|.. |+++..++.......+|.+++..+.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~~g~~~~~~~~g~~~g~~~~g~ 155 (396)
T TIGR00882 80 VLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS----RNSNFEYGKARMFGCVGWALCASIAGI 155 (396)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh----hhcccccchhhhhcccHHHHHHHHHhh
Confidence 3222211 11111 11 11223334455555554555545555532 223445666666666777777766554
Q ss_pred c
Q 020432 254 Y 254 (326)
Q Consensus 254 ~ 254 (326)
+
T Consensus 156 l 156 (396)
T TIGR00882 156 L 156 (396)
T ss_pred h
Confidence 3
No 128
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.35 E-value=0.00017 Score=67.66 Aligned_cols=153 Identities=11% Similarity=0.091 Sum_probs=92.9
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
...+++|||+++.-.+.-++.-........+++.|..+..|.+....+........+.++|=++..++.+|+.- .+.+.
T Consensus 228 ~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~-~k~La 306 (422)
T COG0738 228 GLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKP-EKYLA 306 (422)
T ss_pred hHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCH-HHHHH
Confidence 68999999999886665555555666678899999988766544333444445555667777777777666643 33333
Q ss_pred HhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCc-eEEEehhHHHHHHHhhHHHHhh
Q 020432 173 AGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGC-AFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 173 ~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~-g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
+..+...+.+....+.+ +. ..+....+.|+.+++..+..++.--+..+++.+.+ +++ ...=+|.++...+.
T Consensus 307 f~a~~~ill~~~~~l~~--g~-v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~l-----~maivGGAiiP~l~ 378 (422)
T COG0738 307 FYALIAILLLLAVALIG--GV-VALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGLL-----VMAIVGGAIIPPLQ 378 (422)
T ss_pred HHHHHHHHHHHHHHHhc--Ch-HHHHHHHHHHHHhHHHHHHHHHHHHhccCccccccceee-----eeheecchHHHHHH
Confidence 33322222222223322 22 33344567888999999999999999999755432 222 12223445555555
Q ss_pred hhc
Q 020432 252 QSY 254 (326)
Q Consensus 252 ~~~ 254 (326)
|++
T Consensus 379 G~i 381 (422)
T COG0738 379 GVI 381 (422)
T ss_pred HHH
Confidence 654
No 129
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.35 E-value=2.3e-05 Score=74.76 Aligned_cols=143 Identities=9% Similarity=-0.008 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc-----ccchhhhhHhHHHHHHH
Q 020432 107 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG-----QRLKAYYSAGGVLWVFC 181 (326)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~-----gkkk~~~~~~~~l~~~~ 181 (326)
..+|+.+.+-........|.|+++. |.+.+.++.+...... .+..++++++.+|. ||||+....+..+.+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 4567777888888889999999975 7765555555443333 57778899998777 76665556655555555
Q ss_pred HHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 182 GAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 182 ~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
...+.+.++ .+.+.++...++.+.+.+...+...++++|.+++++| +...+.......+|..+++.+.+.+
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r--~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEER--GAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh--hHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 555555543 3345555555666777777788999999999988777 5557777777777777776665543
No 130
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.35 E-value=1.1e-05 Score=77.95 Aligned_cols=143 Identities=8% Similarity=0.001 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHH
Q 020432 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGI 185 (326)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l 185 (326)
.++.+++.++.....+.+.|.+.++ +|.++...+.+.....++..++.++.+++.+|.|+ |+.+..+.+++.++.+..
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~-r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 28 MYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNA-RYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCC-chhHHHHHHHHHHHHHHH
Confidence 3444555555555556677777654 67665556666667777888889999999998886 556677676655554444
Q ss_pred hhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 186 LILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 186 ~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+. ++.+.+++...+.|++.+...+...+.++|..+.++| |...+.......+|..++..+.+++
T Consensus 106 ~~~--~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~r--g~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 106 GFS--SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTER--GGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHH--hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 3344555555667777777677778888999887666 6667888888888888877777665
No 131
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.34 E-value=8.5e-06 Score=78.67 Aligned_cols=150 Identities=11% Similarity=0.097 Sum_probs=93.9
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLW 178 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~ 178 (326)
+++.++...+.+...+..........|++ ++ .|.++...+.......++..++.++.+++.+|.|+ |+.+..+.++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~-~~~~~~~~~~~ 101 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNP-RVFLPAGLILS 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCC-ceehHHHHHHH
Confidence 34444444444444444444344445544 44 37666666666667777888889999999999986 55666666665
Q ss_pred HHHHHHHhhcC--CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 179 VFCGAGILILP--MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 179 ~~~~~~l~~~~--~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
.++.....+.+ .++...+.+...+.|++.+.......+.+.|..+.++| |...|......-++.+++..+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~r--g~~~~~~~~~~~~g~~~~~~l~~~ 176 (438)
T TIGR00712 102 AAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSER--GTIVSIWNCAHNIGGGIPPLLVLL 176 (438)
T ss_pred HHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccc--hhHHHHHHHHHHhHhHHHHHHHHH
Confidence 55544443332 12333444555667777776666666778888877666 666777777777777777766654
No 132
>PRK10504 putative transporter; Provisional
Probab=98.34 E-value=1.5e-05 Score=77.57 Aligned_cols=147 Identities=10% Similarity=0.025 Sum_probs=100.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHH
Q 020432 102 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC 181 (326)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~ 181 (326)
.++.+.+.+++........+...|.|.++ +|.++...+.......++..++.++++++.+|+|+ |+.+..+..+..++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-r~~~~~~~~~~~~~ 88 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGV-RNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhch-HHHHHHHHHHHHHH
Confidence 34445556666666666777888888875 67655444455555566777888999999999886 55566665554444
Q ss_pred HHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 182 GAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 182 ~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+...+ . .+.+.+++..++.|+|.+...+...++++|..+.++| +..++......-++..++..+.+.+
T Consensus 89 ~~~~~~-~-~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 89 SLFCAL-S-GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQY--MAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHH-h-CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 443333 2 3455666777889999998888899999999886655 3446666666667776766666654
No 133
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.32 E-value=0.00012 Score=69.92 Aligned_cols=160 Identities=9% Similarity=0.034 Sum_probs=99.1
Q ss_pred hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---cccchhhhHHHHHHHHHHHHHHHHHHHhcccc
Q 020432 91 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG---QSAKALVPAIIYICSFIVSILLQEMAWTGQRL 167 (326)
Q Consensus 91 ~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~---~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkk 167 (326)
.+++.+++|+|+++...+.........+..-..++-|++...+.. +...+.......++..+...+.|++.||.|-
T Consensus 210 ~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~- 288 (412)
T PF01306_consen 210 LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGA- 288 (412)
T ss_dssp HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh-
Confidence 456788999999998777666666666766555777776655432 1233444445566778888899999888885
Q ss_pred hhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEeh-hHHHHHHHhhH
Q 020432 168 KAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGT-LSFLDKMSCGI 246 (326)
Q Consensus 168 k~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~-~sf~~Kl~~~i 246 (326)
|+..+++..+++ ......-.. .+++.+.+.-.+.++-.+......+=.+++..|.+.. +..+.. ..+...++..+
T Consensus 289 k~~Lllag~i~~-iRi~~~~~~-~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rls--At~y~v~~~~~~~~~~~i 364 (412)
T PF01306_consen 289 KNLLLLAGVIMA-IRIIGSGFA-TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLS--ATLYLVGFQFAKQIGIII 364 (412)
T ss_dssp HHHHHHHHHHHH-HHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGH--HHHHHHHHTTTHHHHHHH
T ss_pred HhHHHHHHHHHH-HHHHHHhhh-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHH--HHHHHHHHHHHHHHHHHH
Confidence 555555554432 222222222 4567777788888887777777666677777776543 444544 34555555555
Q ss_pred HHHhhhhcc
Q 020432 247 AVYVLQSYQ 255 (326)
Q Consensus 247 ~~~i~~~~l 255 (326)
...+.|.+-
T Consensus 365 ~s~~~G~ly 373 (412)
T PF01306_consen 365 LSPLAGYLY 373 (412)
T ss_dssp HHHHHHHHH
T ss_pred HhhhHHhhH
Confidence 555666653
No 134
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.32 E-value=2e-05 Score=80.91 Aligned_cols=128 Identities=13% Similarity=0.021 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHH
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 200 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~ 200 (326)
+...| ++...++.++...+.+.....++.+++.+++++++.|+|| |+.++.+++++.++.++..+.+ +.+.+++.-
T Consensus 187 s~ilp-~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GR-R~~lii~lil~~i~~ll~afa~--s~~~llv~R 262 (742)
T TIGR01299 187 GFVLP-SAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGR-KQCLLICLSVNGFFAFFSSFVQ--GYGFFLFCR 262 (742)
T ss_pred HHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 33444 4445567655555666667788899999999999999996 5566776666555555444432 355666777
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 201 IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 201 ~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.|+|.++..+..+++++|..+.+.| |...+......-+|..++..+..++
T Consensus 263 ~l~G~g~g~~~p~~~~~isE~~p~~~R--g~~~g~~~~~~~iG~ila~~la~~i 314 (742)
T TIGR01299 263 LLSGFGIGGAIPIVFSYFAEFLAQEKR--GEHLSWLCMFWMIGGIYAAAMAWAI 314 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999987766 5556666666666665555544333
No 135
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.31 E-value=3.4e-06 Score=80.14 Aligned_cols=160 Identities=18% Similarity=0.135 Sum_probs=117.7
Q ss_pred HHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHH
Q 020432 124 LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFV 203 (326)
Q Consensus 124 ~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~ 203 (326)
..+=++.+.|.+++....+..+..+..++++++.+.+.+|+.| |+.+..|..+|.++-+.--+. +..+.+++.-.+.
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR-~~v~~vG~~iW~~Av~~~~fs--~~Fwq~~l~R~~v 131 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNR-KRVIAVGIFIWTLAVFASGFS--NHFWQVLLCRGFV 131 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCc-ceEEeeHHHHHHHHHHHHHHH--HHHHHHHHHHHHh
Confidence 3444555666666666777777788889999999999999985 778888888888765544443 3456777777889
Q ss_pred hhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCcccccc
Q 020432 204 GIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTS 283 (326)
Q Consensus 204 g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
|+|.+...++..++++|.-++++| +..++++.|+.-.|.++|..+-+ ++.+ .
T Consensus 132 GiGeAs~~~ia~s~IaD~f~~~~R--s~~~~ify~~ipvGsglG~vvgs-------~va~---------------~---- 183 (493)
T KOG1330|consen 132 GIGEASYSPIAPSLIADSFPDDKR--SRVLGIFYFAIPVGSGLGYVVGS-------VVAS---------------L---- 183 (493)
T ss_pred ccchhhhcccchhHhhhcCcchhh--hHHHHHhhhhcccccceeEEeee-------eecc---------------C----
Confidence 999999999999999999999999 66789999988888554432222 2221 1
Q ss_pred ccceeeeecchHhHHHHHHHHHHHhhccCCCC
Q 020432 284 YISVTRFGLGLIPAICSLVSVAVTFTMKLHTP 315 (326)
Q Consensus 284 ~~~~i~~~~~~iP~~~~l~~~i~~~~y~l~~~ 315 (326)
...-|+++-..|.+..+.+++..++-+..++
T Consensus 184 -~~~Wr~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 184 -TFWWRWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred -ccceEEEEEeehHHHHHHHHHHHhhccCccc
Confidence 1228888888888887777777777666553
No 136
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.30 E-value=2.5e-05 Score=74.01 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=95.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
||-.....+..+....+.+....+.|.+.++ +|.++...........++..++.++.+++.+|.|| |+.+..+..+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~-r~~l~~~~~~~~ 79 (392)
T PRK10473 2 SRFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGR-KPVAIPGAALFI 79 (392)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCC-hHHHHHHHHHHH
Confidence 4444444455555566666666666766544 66655445555556666778888899999988886 556666666655
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
++...+.+. ++....++...+.|++.+......+++++|..|+++| +...+.......++..++..+.+.
T Consensus 80 i~~~~~~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~i~~~~~~~i~~~ 149 (392)
T PRK10473 80 IASLLCSLA--ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRR--AKVLSLLNGITCIIPVLAPVLGHL 149 (392)
T ss_pred HHHHHHHHh--CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554444432 3445556666778888888888889999999988777 334566666666665555444443
No 137
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.29 E-value=9.8e-06 Score=74.40 Aligned_cols=144 Identities=10% Similarity=0.043 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHH
Q 020432 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGI 185 (326)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l 185 (326)
....++.............+.|.++. +.++...+.......+...++.++++++.+|.|| |+....+..+..++...+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~-r~~~~~~~~~~~~~~~~~ 81 (352)
T cd06174 4 LFLGFFLSGLDRGLLSPALPLLAEDL-GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGR-RRVLLLGLLLFALGSLLL 81 (352)
T ss_pred HHHHHHHHHHhhhhhHhhHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCC-chhhHHHHHHHHHHHHHH
Confidence 34455666666667777888887654 5555555666667777888899999999999986 446667666655555444
Q ss_pred hhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 186 LILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 186 ~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
.+. ++.+..++...+.|++.+...+...++++|..++++| +..++......-+|..++..+.+.+.
T Consensus 82 ~~~--~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 147 (352)
T cd06174 82 AFA--SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKER--GRALGLFSAGFGLGALLGPLLGGLLA 147 (352)
T ss_pred HHh--ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccch--hhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 443 3456677777888998888888999999999998777 55678888888888888777766553
No 138
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.28 E-value=0.00011 Score=72.47 Aligned_cols=159 Identities=18% Similarity=0.180 Sum_probs=107.6
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc-chhhhhH
Q 020432 95 AYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR-LKAYYSA 173 (326)
Q Consensus 95 ~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk-kk~~~~~ 173 (326)
.++++|+.|+...+...+..+....-..+++.|.+ ..+.++...+....+..+..+++-++.+.++.+... |+..+.+
T Consensus 292 ~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~ 370 (509)
T KOG2504|consen 292 LSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLL 370 (509)
T ss_pred HHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHH
Confidence 47889999988888888888888888999999998 556655444555556677888888999999865542 3444444
Q ss_pred hHHHHHHHHHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 174 GGVLWVFCGAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 174 ~~~l~~~~~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
+.+...++. .+.|. .+...+....++.|++.|....+..-.+.|.++.++-..+ ++...+..=++.-+|..+.|
T Consensus 371 ~ll~~gl~~---~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a--~Gl~l~~~gi~~l~gpPiag 445 (509)
T KOG2504|consen 371 TLLIAGLAR---LFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNA--YGLLLLFQGIGALVGPPIAG 445 (509)
T ss_pred HHHHHHHHH---HHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchH--HHHHHHHhHHHHHcCcccce
Confidence 443322222 23332 3345666677888999988888888899999987553322 56666666666666666667
Q ss_pred hcccCCC
Q 020432 253 SYQSMSP 259 (326)
Q Consensus 253 ~~l~~~~ 259 (326)
.+.+..+
T Consensus 446 ~~~d~tg 452 (509)
T KOG2504|consen 446 LLYDITG 452 (509)
T ss_pred eeeeccC
Confidence 5544444
No 139
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.26 E-value=2.9e-06 Score=81.44 Aligned_cols=138 Identities=9% Similarity=0.144 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH----hcccchhhhhHhHHHHHHHHHHHhh
Q 020432 112 LTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW----TGQRLKAYYSAGGVLWVFCGAGILI 187 (326)
Q Consensus 112 ~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k----~~gkkk~~~~~~~~l~~~~~~~l~~ 187 (326)
......+....|+++|+++.+|.++...+.+..+..+...+..++.++++. |.||||.....+.....++...+++
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~ 89 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFT 89 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHh
Confidence 345555667789999999999987766677666677777888888888864 3576566556666565555555554
Q ss_pred cCCcc----hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhc-CCCCCceEEEehhHHHHHHHhhHHHHhh
Q 020432 188 LPMNM----SAFMYVLAIFVGIANALMMVTGISMQNVLVG-EDLSGCAFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 188 ~~~~~----~~~~l~~~~~~g~g~~~~~~~~~am~aD~id-~~~r~~g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
.|+.+ ....++...+.+.+.+....-..++.+|..+ +++| +...+......-+|..+++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R--~~~~~~~~~~~~~g~~l~~~~~ 156 (437)
T TIGR00792 90 TPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRER--ESLSTFRRFGATLGGLLVAVIV 156 (437)
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 44321 1233344455666666666667788889874 5555 3345666666666654444433
No 140
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.26 E-value=3.3e-05 Score=73.07 Aligned_cols=145 Identities=8% Similarity=-0.036 Sum_probs=95.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHH
Q 020432 102 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC 181 (326)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~ 181 (326)
.++.+....+.............|.+. .++|.++...+.......++.+++.++++++.+|.|+ |+.+..+..+..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~ 81 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELA-HDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSL-KHILLFLVALCVIG 81 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHH-HHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCcc-HHHHHHHHHHHHHH
Confidence 344445555555555556666676654 4567655555666667788889999999999999985 66677777666655
Q ss_pred HHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 182 GAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 182 ~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.++..+. ++.+.+++..++.|++.+...+...+.+.|..|+++| +...|.......++..++..+.+
T Consensus 82 ~~l~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~g~~l~~ 148 (382)
T PRK10091 82 NAMFTLS--SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKV--TAAVAGMVSGMTVANLLGIPLGT 148 (382)
T ss_pred HHHHHHh--CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHh--hHHHHHHHHHHHHHHHHhccHHH
Confidence 5544443 3566777777889998888777777888888887655 33345555555555555444433
No 141
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.24 E-value=3.9e-05 Score=74.77 Aligned_cols=140 Identities=13% Similarity=-0.021 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhc-
Q 020432 110 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILIL- 188 (326)
Q Consensus 110 ~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~- 188 (326)
|.+.+......+...|. +...+|.++...+.+.....++..++.++.+++++|+|+ |+.+..+.+++.+....+.+.
T Consensus 38 ~~~~y~~r~~~~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~-r~~l~~~~~~~~~~~~~~~~~~ 115 (467)
T PRK09556 38 YLTMYLIRKNFKAAQND-MISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNT-KQFLPFLLILSAICMLGFGASL 115 (467)
T ss_pred HHHHHHHhcChhhhhHH-HHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCc-cchHHHHHHHHHHHHHHHHHHH
Confidence 33333333334445554 445667655556666666777788888999999999886 555666665554443333221
Q ss_pred --CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 189 --PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 189 --~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
...+...+++.-++.|++.+...+...++++|..++++| |...|......-+|..+++.+..+
T Consensus 116 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--g~a~gi~~~~~~lG~~l~~~i~~~ 180 (467)
T PRK09556 116 GSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKR--GRFLGFWNISHNLGGAGAGGVALW 180 (467)
T ss_pred hcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccce--eeeEEeeecccchhhhHHHHHHHH
Confidence 123455666667788888888888888899999988777 777888888888888777665543
No 142
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.23 E-value=6e-05 Score=74.10 Aligned_cols=146 Identities=10% Similarity=0.082 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHH
Q 020432 104 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGA 183 (326)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~ 183 (326)
..+++.+++..+-.+..+...|.... .+|.+.....++.....++..+..++++++.+|+|| |+.+..+..+..++.+
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~-~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Gr-k~~l~~~~~~~~~~~~ 86 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSM-TLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGF-KRLLMLGGTLFGLASL 86 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHH
Confidence 34456677777777778888887754 466554445566556666777777889999999996 6667777766665555
Q ss_pred HHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhh-cCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 184 GILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLV-GEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 184 ~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~i-d~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
...+. ++.+.+++.-.+.|+|.+...+...+.+.|.. |+++| +...|.+....-+|..+|..+.+++.
T Consensus 87 ~~~~a--~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r--~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 87 AAAFS--PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQR--NMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44443 35566666677889988887777777777765 45555 55578888888888888887777653
No 143
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.21 E-value=2.5e-05 Score=73.86 Aligned_cols=149 Identities=9% Similarity=0.019 Sum_probs=103.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
+|+++.+....++........+...|.|.++ +|.++...+.+.....++..++.++.+++.+|+|| |+.+..+..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~-k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGF-NRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHH
Confidence 4566666677777778888888899988875 57655556676677778888889999999999986 556666666655
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.....+ . ++.+.+++..++.|++.+...+...+.+.|..++++| |...|......-+|..+|..+.+..
T Consensus 83 ~~~~~~~~-~-~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~g~~~~~~l 153 (381)
T PRK03633 83 AGCAGLGL-M-VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNR--GRLLAAYMMVYYLGTVLGQLLVSKV 153 (381)
T ss_pred HHHHHHHH-h-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55444333 2 3456666677788888887777666666676665554 4456676666677776666655543
No 144
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.21 E-value=3.6e-05 Score=78.03 Aligned_cols=158 Identities=8% Similarity=-0.002 Sum_probs=96.5
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCC----------Cccchh-c-cchhhhhHHHHHHHHHhhhheeee
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAK----------THADLE-N-QYRWIAYSSIFIGCCFVGIFLSRT 75 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~----------~~~~~~-~-g~~~~~~i~~~i~~~~~~~~~~~t 75 (326)
.+++|....++-.....+|..+...+...+.+..... ...|.. . +|+..-++.++++++..+..++.-
T Consensus 202 ~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 202 KSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFP 281 (633)
T ss_pred CccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4677888888888888888777666554444332110 011211 1 255555555655555444333333
Q ss_pred cCCCcc----c---C--C-----CCC---------cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020432 76 EEPRLK----M---G--L-----RGN---------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL 132 (326)
Q Consensus 76 kE~~~~----~---~--~-----~~~---------~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l 132 (326)
||.+.+ + . + +++ .++.+.++.+++||.++...+..++..........++|.|++..+
T Consensus 282 ~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~ 361 (633)
T TIGR00805 282 KALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQY 361 (633)
T ss_pred cccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 332110 0 0 0 000 012346788999999999888888888888889999999999999
Q ss_pred cCCcccchhhhHHHHH-HHHHHHHHHHHHHHhcc
Q 020432 133 RMGQSAKALVPAIIYI-CSFIVSILLQEMAWTGQ 165 (326)
Q Consensus 133 ~~~~~~~~~~~~~~~i-~~~i~~~~~~~l~k~~g 165 (326)
|.++...+.+.....+ +.+++.++.+++.+|.+
T Consensus 362 g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~ 395 (633)
T TIGR00805 362 GISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFK 395 (633)
T ss_pred CCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeec
Confidence 9876555444443333 45778888888887765
No 145
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.20 E-value=0.00021 Score=71.33 Aligned_cols=153 Identities=10% Similarity=0.088 Sum_probs=89.5
Q ss_pred HHHhhc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cchhhhHHHHHHHHHHHHHHHHHHHhcccchhh
Q 020432 95 AYWFKK-ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPAIIYICSFIVSILLQEMAWTGQRLKAY 170 (326)
Q Consensus 95 ~~~~~N-~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~---~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~ 170 (326)
+.+||| |.|...++..++..........++|....+..+.++. ..........++...+..+.+.+.++.++-|+.
T Consensus 303 ~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~ 382 (599)
T PF06609_consen 303 HRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQ 382 (599)
T ss_pred HHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHH
Confidence 345566 5565544444444444455567888887777665331 123333444556677777777776665555666
Q ss_pred hhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHH
Q 020432 171 YSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVY 249 (326)
Q Consensus 171 ~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~ 249 (326)
.+++.+++.++.-.+....+++....+...++.|+|.|........+..=.++++.- |+..++...++-+|.++|.+
T Consensus 383 li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~i--g~a~gL~~s~R~~GGsIg~a 459 (599)
T PF06609_consen 383 LIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDI--GTATGLTGSIRSIGGSIGYA 459 (599)
T ss_pred HHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHH--HHHHHHHHHHHHHhhHHHHH
Confidence 667666655443344444455655566777888888888776666655555554322 45555566666666555544
No 146
>PRK03699 putative transporter; Provisional
Probab=98.19 E-value=6.4e-05 Score=71.45 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhh
Q 020432 108 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILI 187 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~ 187 (326)
+.+++........+...|.+. ..+|.++...+.......++..++.++.+++.+|+|+ |+.+..+..+..++..+..+
T Consensus 14 ~~~~~~~~~~~~~g~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~-r~~~~~~~~~~~i~~~l~~~ 91 (394)
T PRK03699 14 LSYALTGALVIVTGMVMGPIA-EYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPL-KRQLIFGFALMILAVAGLMF 91 (394)
T ss_pred HHHHHHHHHHHHHhhhhHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHHHHHH
Confidence 444444444455556666654 4567665555666566677888889999999999886 55566666555555444444
Q ss_pred cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 188 LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 188 ~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
. ++.+..++...+.|++.+.......++++|..++++| |...+......-++..++..+.+.
T Consensus 92 ~--~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~ 153 (394)
T PRK03699 92 S--HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQR--GSRLLFTDSFFSMAGMIFPIIAAY 153 (394)
T ss_pred c--chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3455566667778888887777788888998876655 433344333333444444444443
No 147
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.18 E-value=3.7e-05 Score=74.56 Aligned_cols=125 Identities=10% Similarity=0.093 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC--cchhHHHH
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM--NMSAFMYV 198 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~--~~~~~~l~ 198 (326)
....|+ +.+. |.++...+.......++..++.++.+++.+|+|+ |+.+..+.++..+..+.+.+.+. .+...+++
T Consensus 49 ~~~~p~-l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~-k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 125 (452)
T PRK11273 49 ALAMPY-LVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNP-RVFLPAGLILAAAVMLFMGFVPWATSSIAVMFV 125 (452)
T ss_pred HHhhHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCC-chhHHHHHHHHHHHHHHHHhhhcccccHHHHHH
Confidence 344554 4444 7666556666667778888899999999999996 55677777666655554444331 23445556
Q ss_pred HHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHh
Q 020432 199 LAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 199 ~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
...+.|++.+...+.....+.|..+.++| |...|.+....-++.++++.+
T Consensus 126 ~~~l~gi~~g~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~l 175 (452)
T PRK11273 126 LLFLCGWFQGMGWPPCGRTMVHWWSQKER--GGIVSVWNCAHNVGGGLPPLL 175 (452)
T ss_pred HHHHHHHHHhccchHHHHHHHHhCChHHH--HHHHHHHHHHHHhhhhHHHHH
Confidence 66677887776655555677777666666 444566666666665554443
No 148
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.17 E-value=0.00014 Score=71.53 Aligned_cols=154 Identities=8% Similarity=0.037 Sum_probs=101.6
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc-----ccchhh
Q 020432 96 YWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG-----QRLKAY 170 (326)
Q Consensus 96 ~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~-----gkkk~~ 170 (326)
++.++|+...+..+++.+.+.........+.|.++. |.+....+.+.... ...++.++|.|+..|+ ||||..
T Consensus 7 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~~~--~~~~~~~l~gpl~Dr~~~~~~Grrr~~ 83 (491)
T PRK11010 7 RIFQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSLVG--QAYVFKFLWSPLMDRYTPPFLGRRRGW 83 (491)
T ss_pred HHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH--HHHHHHHHHHHHHHcccccCCCCchHH
Confidence 455677777777777777777777888888886664 43322233332211 1135778899998877 765543
Q ss_pred hhHhHHHHHHHHHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHH
Q 020432 171 YSAGGVLWVFCGAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVY 249 (326)
Q Consensus 171 ~~~~~~l~~~~~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~ 249 (326)
...+.+..+++...+.+.++ .+.+.+.+..++.+++.+...+...++.+|..++++| |...+.......+|..+++.
T Consensus 84 ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~r--g~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 84 LLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEER--GAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred HHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh--HHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444443 4455666677788888888888899999999998777 55577888888888777766
Q ss_pred hhhhc
Q 020432 250 VLQSY 254 (326)
Q Consensus 250 i~~~~ 254 (326)
+.+++
T Consensus 162 l~~~l 166 (491)
T PRK11010 162 LALWL 166 (491)
T ss_pred HHHHH
Confidence 65554
No 149
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.16 E-value=2.3e-05 Score=74.38 Aligned_cols=206 Identities=11% Similarity=0.065 Sum_probs=113.2
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhh--hhHHHHHHHHHhhhheeeecCCCcccCC-
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWI--AYSSIFIGCCFVGIFLSRTEEPRLKMGL- 84 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~i~~~i~~~~~~~~~~~tkE~~~~~~~- 84 (326)
-++||...++.-.+...+|..+...+++++++.-. +.+ ...|... -..++.++++....+.+..||++..+++
T Consensus 170 ~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~---~~~-~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~ 245 (480)
T KOG2563|consen 170 PPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSK---DSE-DNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSA 245 (480)
T ss_pred CcchhhhhhhHHHhcchHHHHHHhhccceecCCCC---Ccc-hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCch
Confidence 47899999999998888998888888877776521 111 2344443 2223344444444444444554332222
Q ss_pred ----CCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh---cCCcccchhhhHHHHHHHHHHHHH
Q 020432 85 ----RGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIN-DL---RMGQSAKALVPAIIYICSFIVSIL 156 (326)
Q Consensus 85 ----~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~l---~~~~~~~~~~~~~~~i~~~i~~~~ 156 (326)
+..-++.+.++..++|++|..++.+|-+.....+ ..+++.+ -+ |.+....+.......+++++++.+
T Consensus 246 s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~-----~l~~~l~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~ 320 (480)
T KOG2563|consen 246 SQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFN-----SLSTLLNLALCPSGYEGVFAGYIGALMIVAGMLGALA 320 (480)
T ss_pred hHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHH-----HHHHHhhhccccccCCccccchhHHHHHHHHHHHHHH
Confidence 1123578899999999999887765544433222 2222222 11 111122345555667788899999
Q ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHhh--cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhh
Q 020432 157 LQEMAWTGQRLKAYYSAGGVLWVFCGAGILI--LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLV 222 (326)
Q Consensus 157 ~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~--~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~i 222 (326)
.+.+..|.+|.|.+.........++...+.. ........++....+.|++..+..++.+-+-.|+.
T Consensus 321 ~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~T 388 (480)
T KOG2563|consen 321 SGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETT 388 (480)
T ss_pred HHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeec
Confidence 8888755544344443333332222111111 12234456666667777766555555555555555
No 150
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.16 E-value=1.2e-05 Score=78.63 Aligned_cols=131 Identities=11% Similarity=0.107 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH----hcccchhhhhHhHHHHHHHHHHH
Q 020432 110 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW----TGQRLKAYYSAGGVLWVFCGAGI 185 (326)
Q Consensus 110 ~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k----~~gkkk~~~~~~~~l~~~~~~~l 185 (326)
.+..+...+....|+++|+++++|.++...+.+..+.-+...+..++++.++. |+||||.....+....+++..++
T Consensus 15 ~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ll 94 (473)
T PRK10429 15 AFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLL 94 (473)
T ss_pred hhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHH
Confidence 34455666677899999999999987766666666666666677777777765 56876665555665544444444
Q ss_pred hhcCCcc-----hhHHHHHHHHHhhHHHHHHHHHHHHhHhhh-cCCCCCceEEEehhHHHHHHH
Q 020432 186 LILPMNM-----SAFMYVLAIFVGIANALMMVTGISMQNVLV-GEDLSGCAFVCGTLSFLDKMS 243 (326)
Q Consensus 186 ~~~~~~~-----~~~~l~~~~~~g~g~~~~~~~~~am~aD~i-d~~~r~~g~i~s~~sf~~Kl~ 243 (326)
+ .+++. ....++..++.+++.+..++-.+|+.+|.. |+++|.. +++...+...++
T Consensus 95 f-~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~--l~~~~~~~~~ig 155 (473)
T PRK10429 95 F-SAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQ--LVPYPRFFASLA 155 (473)
T ss_pred H-cCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHH--HHHHHHHHHHHH
Confidence 4 33321 123344445566777777888889999998 5666643 355545555554
No 151
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.15 E-value=1.1e-05 Score=75.32 Aligned_cols=225 Identities=12% Similarity=0.012 Sum_probs=126.5
Q ss_pred CCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCCCC
Q 020432 7 LNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGLRG 86 (326)
Q Consensus 7 ~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~~~ 86 (326)
+|.+||.+..+.-..|..+|-++..-+.-.+.++ .||..=-++.+++.++-..+-++-.+.++.++++++
T Consensus 189 ~~d~er~~vmGialgfislG~lvgPpfGGilYe~----------~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~~ 258 (464)
T KOG3764|consen 189 PEDNERGSVMGIALGFISLGVLVGPPFGGILYEF----------AGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDSTE 258 (464)
T ss_pred ccchhhhHHHHHHHHHHhccceecCCcccchHhh----------cCCcCcHHHHHHHHHHHHHHHHheeCccccCccccc
Confidence 5788898888877766666654332222222222 355555567777776666555443333333221211
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhccc
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk 166 (326)
+ ...++.+++.+..+...+....++......-..++.|..+.+..+.-......+...+...++..+...+++|++.
T Consensus 259 ~---~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~ 335 (464)
T KOG3764|consen 259 Q---GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPH 335 (464)
T ss_pred c---CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCc
Confidence 1 2356778887777766666677777777777888889988888433133444444566778888999999888774
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhh
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCG 245 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~ 245 (326)
.|+...+++.+. .+ ......|- .+...+++.-+..+++.+..-...-..++.++|.+..++==+|+....+...+..
T Consensus 336 ~~wl~~~~gl~~-~G-~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~s 413 (464)
T KOG3764|consen 336 LRWLLSLGGLAT-VG-VSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFS 413 (464)
T ss_pred hhHHHHHHHHHH-HH-HHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHH
Confidence 455555444332 22 22222231 2223334444445555555555555677888887443210045554444444433
Q ss_pred H
Q 020432 246 I 246 (326)
Q Consensus 246 i 246 (326)
+
T Consensus 414 l 414 (464)
T KOG3764|consen 414 L 414 (464)
T ss_pred H
Confidence 3
No 152
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.14 E-value=7.8e-05 Score=71.04 Aligned_cols=127 Identities=12% Similarity=0.048 Sum_probs=87.4
Q ss_pred HHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHH
Q 020432 122 AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAI 201 (326)
Q Consensus 122 ~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~ 201 (326)
...|-+. ..+|.+++..+.......+...++.++++++.+|+|| |+.+..+..+..++.+...+. ++.+..++...
T Consensus 41 ~~l~~~~-~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~gr-r~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~ 116 (394)
T PRK10213 41 SLLTPMA-QDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDR-RYVVILFAVLLTLSCLLVSFA--NSFSLLLIGRA 116 (394)
T ss_pred hhHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc-HHHHHHHHHHHHHHHHHHHHH--ChHHHHHHHHH
Confidence 3444443 4556655555555556677778888999999999986 666777777665554444332 45667777778
Q ss_pred HHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 202 FVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 202 ~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+.|++.+...+...++++|..++++| +...+......-++..++..+.+.+
T Consensus 117 l~G~~~g~~~~~~~~~i~~~~~~~~~--~~a~~~~~~~~~~g~~ig~~l~~~l 167 (394)
T PRK10213 117 CLGLALGGFWAMSASLTMRLVPPRTV--PKALSVIFGAVSIALVIAAPLGSFL 167 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHcCHhHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999998888999999999987766 3345666666666666666666554
No 153
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.14 E-value=9.2e-06 Score=78.59 Aligned_cols=235 Identities=12% Similarity=0.069 Sum_probs=121.3
Q ss_pred cCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCcccCC-
Q 020432 6 TLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKMGL- 84 (326)
Q Consensus 6 T~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~~~- 84 (326)
-++|++|.++.++=.....+|+++...+.-++.+.. +.+..+. +.+++..+..+.+.+..+||..++..
T Consensus 116 ~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~------~~~~~f~----i~~~~~~l~~~~~~~~~~e~~~~~~~~ 185 (433)
T PF03092_consen 116 RREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF------GPQGVFL----ISAALPLLMLIVALFLLEERKVRPADE 185 (433)
T ss_pred hcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC------CCeEEeh----HHHHHHHHHHHHHHHhhhhccccccch
Confidence 456777888887766667777776655543333321 2122332 23333333333333445553221110
Q ss_pred -----CC--Cc--c-hh---hhHHHHhhchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhc---CCcccchhhhHHHH
Q 020432 85 -----RG--NS--H-AR---ISWAYWFKKILYYQVAL-VYMLTRLVVNVSQAYLAFYVINDLR---MGQSAKALVPAIIY 147 (326)
Q Consensus 85 -----~~--~~--~-~~---~~l~~~~~N~~~~~~~~-~~~~~~~~~~~~~~~~~~Y~~~~l~---~~~~~~~~~~~~~~ 147 (326)
++ +. + .+ ..++..+++|..+...+ ..++.........+...||..+.++ +++.+.+....+..
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~vg~ 265 (433)
T PF03092_consen 186 VFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIVGS 265 (433)
T ss_pred hhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHHHH
Confidence 11 10 1 22 24556667776665444 2222222222222334555566666 55555666666777
Q ss_pred HHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH-HhhcC--------CcchhHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 148 ICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG-ILILP--------MNMSAFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~-l~~~~--------~~~~~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
++.+++..+..+.-++.. -|+++....++.++..+. +.++. ++. +..+.-.++..+.....++-...+.
T Consensus 266 ~~~l~g~~~y~~~~~~~~-~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~i~~mP~lvl~ 343 (433)
T PF03092_consen 266 IASLLGILLYRKYFSNWS-WRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGMIAFMPSLVLA 343 (433)
T ss_pred HHHHHHHHHHHHHHhCCC-HHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHHHHHHHHHHHH
Confidence 788888888776644433 245555544443332221 11111 122 2333344555555555555556788
Q ss_pred HhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.+++|.| |.+||+..-..-+|..++..+...+
T Consensus 344 a~lcP~G~E--gt~yall~s~~Nlg~~~s~~lg~~l 377 (433)
T PF03092_consen 344 ARLCPKGSE--GTVYALLASFSNLGSSVSSTLGAFL 377 (433)
T ss_pred HHHCCCCch--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899998876 7788887777777766665554444
No 154
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.13 E-value=3.3e-05 Score=72.55 Aligned_cols=131 Identities=9% Similarity=0.061 Sum_probs=89.3
Q ss_pred HHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHH
Q 020432 118 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMY 197 (326)
Q Consensus 118 ~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l 197 (326)
......+|.|.++ +|.++...+.......++..++.++++++.+|.|| |+.+..+..+..++...+.+. ++.+..+
T Consensus 8 ~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 83 (377)
T PRK11102 8 DMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGR-KPVILGGTLVFALAAVACALA--QTIDQLI 83 (377)
T ss_pred HHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCC-hHHHHHHHHHHHHHHHHHHHH--ccHHHHH
Confidence 3344556666654 56655555666666777788888999999988885 556666666655555444443 3445566
Q ss_pred HHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 198 VLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 198 ~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+...+.|++.+.......++++|..++++| +...+......-++..++..+.+.+
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~l 138 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEF--SRMMSFVTLVMTIAPLLAPIIGGWL 138 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667778888888888888999999887766 4456777776677766666655543
No 155
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.12 E-value=0.00011 Score=69.87 Aligned_cols=131 Identities=13% Similarity=0.087 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHH
Q 020432 118 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMY 197 (326)
Q Consensus 118 ~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l 197 (326)
......++.+. ..+|.++...+.......++..++.++.+++.+|+|| |+.+..+..+..++.....+. ++.+.++
T Consensus 30 ~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~-r~~l~~~~~~~~~~~~~~~~~--~~~~~l~ 105 (406)
T PRK15402 30 DMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGR-RPVMLAGVAFFILTCLAILLA--QSIEQFT 105 (406)
T ss_pred hhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHH--ccHHHHH
Confidence 33344444433 4566655545555556677788888999999999986 556666665555554444433 3455566
Q ss_pred HHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 198 VLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 198 ~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+...+.|++.+......++.+.|..++++|..+ .+.......++..++..+.+.+
T Consensus 106 ~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 106 LLRFLQGIGLCFIGAVGYAAIQESFEEADAIKI--TALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred HHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 667777888887778888899999887665332 3444444445555555555543
No 156
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.11 E-value=0.0001 Score=72.06 Aligned_cols=120 Identities=8% Similarity=0.014 Sum_probs=75.1
Q ss_pred HHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhH
Q 020432 127 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIA 206 (326)
Q Consensus 127 Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g 206 (326)
++...+|.+....+.+.....++..++.++.+++.+|+|+ |+....+.+++.++.+...+. .+...+++..++.|++
T Consensus 61 ~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~-r~~~~~~~~~~~~~~~~~~~~--~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 61 IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGP-RYGSAFLLMLTAPAVFCMSLV--SSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHH
Confidence 5566677655445555556667778888999999988886 555666665555544444333 2344555555667777
Q ss_pred HHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 207 NALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 207 ~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.+.... ....++|..+.++| |...+.......+|.+++..+..
T Consensus 138 ~~~~~~-~~~~i~~~~~~~~r--g~a~g~~~~~~~~g~~~~~~~~~ 180 (476)
T PLN00028 138 LATFVS-CQYWMSTMFNGKIV--GTANGIAAGWGNLGGGVTQLLMP 180 (476)
T ss_pred HHhhHH-HHHHHHHhcChhhe--eHHHHHHHHHHHHHHHHHHHHHH
Confidence 665432 33456777776666 66567766666777777655543
No 157
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.11 E-value=2.6e-06 Score=82.03 Aligned_cols=142 Identities=13% Similarity=0.166 Sum_probs=88.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH----hcccchhhhhHhHHHHHHHHHHHhh
Q 020432 112 LTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW----TGQRLKAYYSAGGVLWVFCGAGILI 187 (326)
Q Consensus 112 ~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k----~~gkkk~~~~~~~~l~~~~~~~l~~ 187 (326)
......+....|+++|+++++|.++...+.+..+.-+...+.-++.+.++. |+||||.....|....+++..+++.
T Consensus 12 ~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~ 91 (428)
T PF13347_consen 12 GYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFS 91 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhc
Confidence 334445556679999999999987644444444333334333344444432 7787676566676666666666665
Q ss_pred cCC-cc-----hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-CCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 188 LPM-NM-----SAFMYVLAIFVGIANALMMVTGISMQNVLVGE-DLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 188 ~~~-~~-----~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
.+| +. ....++..++..++.+....-..|+.+|..++ |+|. -..+...+...+|..+...+...+.
T Consensus 92 ~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~--~l~~~~~~~~~~g~~l~~~~~~~l~ 164 (428)
T PF13347_consen 92 PPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERT--RLSSWRMIFSMIGSLLASFLAPILV 164 (428)
T ss_pred cccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhh--hHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 423 11 12345555566778888888889999999975 5553 3578888888887755555555443
No 158
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.10 E-value=6.9e-05 Score=72.83 Aligned_cols=108 Identities=12% Similarity=-0.001 Sum_probs=75.1
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhc-------CCcc---hhHHHHHHHHHhhHH
Q 020432 138 AKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILIL-------PMNM---SAFMYVLAIFVGIAN 207 (326)
Q Consensus 138 ~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~-------~~~~---~~~~l~~~~~~g~g~ 207 (326)
..+.......++.+++.++++++.+|+|| |+.+..+..+..++.....+. ..++ ...+++.-++.|++.
T Consensus 56 ~~~~~~s~~~ig~~~~~~~~G~l~dr~Gr-r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~ 134 (479)
T PRK10077 56 LLGFCVASALIGCIIGGALGGYCSNRFGR-RDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGV 134 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhH
Confidence 34555667778889999999999999996 666777766655444333221 1111 234455667889999
Q ss_pred HHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 208 ALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 208 ~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
|...+...++++|..+.++| |...+..+...-+|..++.
T Consensus 135 g~~~~~~~~~i~e~~~~~~r--g~~~~~~~~~~~~G~~~~~ 173 (479)
T PRK10077 135 GLASMLSPMYIAEIAPAHIR--GKLVSFNQFAIIFGQLVVY 173 (479)
T ss_pred hHHhhHHHHHHHhhCChhhh--hHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998777 5656777766666655543
No 159
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.10 E-value=0.00011 Score=69.78 Aligned_cols=133 Identities=11% Similarity=0.008 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCc
Q 020432 112 LTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMN 191 (326)
Q Consensus 112 ~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~ 191 (326)
+........+...|.+. +.+|.++...+.+.....++.+++.++.+++.+|+|+ |+.+..+..+..++.+...+. .
T Consensus 26 ~~~~~~~~~~~~~~~~~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~--~ 101 (406)
T PRK11551 26 LEGLDLQSAGVAAPRMA-QEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGR-KRILIVSVALFGLFSLATAQA--W 101 (406)
T ss_pred HHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHHh--c
Confidence 33333444455555554 4567766666666667778888889999999999996 556676665555544443333 3
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHh
Q 020432 192 MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 192 ~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
+.+.+++..++.|++.+...+...++++|..++++| |...+......-+|..++..+
T Consensus 102 ~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~ 158 (406)
T PRK11551 102 DFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLR--GTAVSLMYCGVPFGGALASVI 158 (406)
T ss_pred cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 456667777888999888888889999999987666 444566655555555554443
No 160
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.09 E-value=0.00012 Score=70.12 Aligned_cols=124 Identities=15% Similarity=0.040 Sum_probs=85.3
Q ss_pred HHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHH
Q 020432 122 AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAI 201 (326)
Q Consensus 122 ~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~ 201 (326)
.+...+++..+|.++...........++..++.++.+++.+|+|| |+.+..+.++..++.....+. ++.+.+++.-.
T Consensus 38 ~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~-r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~ 114 (426)
T PRK12307 38 FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGR-KPLMMWSIVAYSVGTGLSGLA--SGVIMLTLSRF 114 (426)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHH--hHHHHHHHHHH
Confidence 444445566677765555666667778888999999999999986 666777776666555444443 34566777778
Q ss_pred HHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHh
Q 020432 202 FVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 202 ~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
+.|+|.+.......++++|..+.++| +...+......-+|..++..+
T Consensus 115 l~G~g~g~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~lg~~~~~~l 161 (426)
T PRK12307 115 IVGMGMAGEYACASTYAVESWPKHLK--SKASAFLVSGFGIGNIIAAYF 161 (426)
T ss_pred HHHHHHhhHHHHHHHHHHHhCCHhHh--hHhhhHHHHHHhHHHHHHHHH
Confidence 88999988888888999999987766 444556555555554444433
No 161
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.09 E-value=9e-05 Score=70.67 Aligned_cols=146 Identities=12% Similarity=0.056 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
...+..++..........+.+.|.++ +|.++...+.......++..++.++.+++.+|.|+ |+.+..+..++.++...
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~-k~~l~~~~~~~~~~~~~ 94 (402)
T TIGR00897 17 WGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGP-LKTMMIGLLLWCVGHAA 94 (402)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHH
Confidence 33444555555555556677777754 57666566666667778889999999999999986 55666666665554433
Q ss_pred Hhh--cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhh-HHHHhhhhc
Q 020432 185 ILI--LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCG-IAVYVLQSY 254 (326)
Q Consensus 185 l~~--~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~-i~~~i~~~~ 254 (326)
... ....+...+++...+.|+|.+.......+.+.|..++++| |...|.......+|.+ ++..+.+..
T Consensus 95 ~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~~~g~~~~~~l 165 (402)
T TIGR00897 95 FIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNL--SSAVGWFWAVYSIGIGVFGSYYSSYA 165 (402)
T ss_pred HHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 221 2223455555666677888777666666677787777666 5556777777777654 333333443
No 162
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.08 E-value=0.00027 Score=69.67 Aligned_cols=84 Identities=18% Similarity=0.129 Sum_probs=59.3
Q ss_pred hhhhHhHHHHHHHHHHHhhcCC-------cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHH
Q 020432 169 AYYSAGGVLWVFCGAGILILPM-------NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDK 241 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~~-------~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~K 241 (326)
..+.+|.++..++...+.+... -+.++.....++.|+|....++...+++.+..+++.| |...|.+.+..=
T Consensus 351 ~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~r--g~~~g~~~l~~a 428 (500)
T PRK09584 351 HKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLM--GFIMGSWFLTTA 428 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHH--HHHHHHHHHHHH
Confidence 3356666665655554433211 1234666677888999999999999999999998877 777888888877
Q ss_pred HHhhHHHHhhhhc
Q 020432 242 MSCGIAVYVLQSY 254 (326)
Q Consensus 242 l~~~i~~~i~~~~ 254 (326)
+|..+++.+.+.+
T Consensus 429 ~g~~~~g~~~~~~ 441 (500)
T PRK09584 429 GAALIAGYVANLM 441 (500)
T ss_pred HHHHHHHHHHHHh
Confidence 7777777666543
No 163
>PRK10133 L-fucose transporter; Provisional
Probab=98.08 E-value=9.1e-05 Score=71.75 Aligned_cols=145 Identities=14% Similarity=0.132 Sum_probs=98.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHH
Q 020432 102 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC 181 (326)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~ 181 (326)
|+..+.+++++..........+.|.+ +..+|.++...........++..+++++.+++.+|+|+ |+....+..++.++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~-r~~l~~g~~~~~~~ 104 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSY-KAGIITGLFLYALG 104 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHH
Confidence 44444455555555556666777776 88888876666777777788889999999999999996 66777777776666
Q ss_pred HHHHhh-cCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHh
Q 020432 182 GAGILI-LPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 182 ~~~l~~-~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
.++... ...++...+++..++.|+|.+...+...++++|..++++| +...+.......+|..++..+
T Consensus 105 ~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~--~~~~s~~~~~~~~G~~~g~~~ 172 (438)
T PRK10133 105 AALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSG--HFRLNLAQTFNSFGAIIAVVF 172 (438)
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhH--HHHHHHHHHHHHHHHHHHHHH
Confidence 544321 1224556677777888999999999989999986544433 222455555666666555444
No 164
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.07 E-value=0.00011 Score=68.50 Aligned_cols=132 Identities=8% Similarity=-0.008 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc-----ccchhhhhHhHHHHHHHHHHHhhcCC-cchh
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG-----QRLKAYYSAGGVLWVFCGAGILILPM-NMSA 194 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~-----gkkk~~~~~~~~l~~~~~~~l~~~~~-~~~~ 194 (326)
+...|.+.++ +|.+....+..... .+...+ .++++++..|. ||||.....+..+..+....+.+.++ .+.+
T Consensus 8 ~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~ 84 (356)
T TIGR00901 8 GNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLP 84 (356)
T ss_pred HhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHH
Confidence 4455666654 46654444444322 222222 66777776554 76554344444444444344444443 3334
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccC
Q 020432 195 FMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSM 257 (326)
Q Consensus 195 ~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~ 257 (326)
.++...++.+.+.+...+...++++|..++++| +...+..+....+|..++..+.+.+.+.
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 145 (356)
T TIGR00901 85 LLAGLAFLIAFFSATQDIALDAWRLEILSDEEL--GYGSTIYIVGYRAGMLLSGSLALVLASP 145 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh--chHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 455555566777777778889999999987777 5567888888888888777776655433
No 165
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.07 E-value=0.00015 Score=68.75 Aligned_cols=146 Identities=16% Similarity=0.100 Sum_probs=89.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHH
Q 020432 102 LYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSA-----KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGV 176 (326)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~-----~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~ 176 (326)
.+....+..++..........++|.|.++ +|.+... .+.+.....+...++.++++++.+|+|| |+.+..+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~ 92 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGR-KIMLLRSAL 92 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCc-HHHHHHHHH
Confidence 33344455666666666777888888865 5543221 2344445666778888889999988886 555666665
Q ss_pred HHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 177 LWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 177 l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+..++...+.+. ++.+.+++...+.|++.+ ......+.++|..++++| |...|......-++..++..+.+.+
T Consensus 93 ~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~l 165 (408)
T PRK09874 93 GMGIVMVLMGLA--QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKS--GWALGTLSTGGVSGALLGPLAGGLL 165 (408)
T ss_pred HHHHHHHHHHHH--hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhh--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555444433332 344555666666777644 345566788888877666 4445666666666666666555543
No 166
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.02 E-value=4.7e-05 Score=60.08 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC
Q 020432 147 YICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL 226 (326)
Q Consensus 147 ~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~ 226 (326)
.++.+++.++.+++.+|.+| |+.+..+..+..++...+.+. ++.+..++...+.|++.+......+++++|..++++
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 84 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGR-KPVLLVGLFIFVLSTAMFALS--SNITVLIIARFLQGFGAAFALVAGAALIADIYPPEE 84 (141)
T ss_pred hhHHHHHHhhHHHHHhhcch-hHHHHHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhh
Confidence 45567778888899888885 555666555544444433332 345566667788889888888999999999999877
Q ss_pred CCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 227 SGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 227 r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
| +...+.......++..++..+.+...
T Consensus 85 ~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 85 R--GVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred h--hHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 7 55678888888999888887777653
No 167
>PRK11462 putative transporter; Provisional
Probab=98.01 E-value=5e-05 Score=74.04 Aligned_cols=139 Identities=6% Similarity=0.017 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH----hcccchhhhhHhHHHHHHHHHHH
Q 020432 110 YMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW----TGQRLKAYYSAGGVLWVFCGAGI 185 (326)
Q Consensus 110 ~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k----~~gkkk~~~~~~~~l~~~~~~~l 185 (326)
.+..+...+....|+++|+++++|.++...+.+..+.-+--.+.-++.+.++. |+||||.-...+.....+...++
T Consensus 18 ~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ll 97 (460)
T PRK11462 18 DAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLA 97 (460)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHH
Confidence 33445556677899999999999997765666555555555555666666642 56776654455555555555555
Q ss_pred hhcCCcc----hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-CCCCceEEEehhHHHHHHHhhHHHHh
Q 020432 186 LILPMNM----SAFMYVLAIFVGIANALMMVTGISMQNVLVGE-DLSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 186 ~~~~~~~----~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-~~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
+..|+.+ ....++..++..++.+..++-.+|+.++..++ |+|. -..|..+....+|..++..+
T Consensus 98 f~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt--~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 98 YSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRI--SLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred HhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 5444211 23344555667888888888899999999964 5663 35788888888876555444
No 168
>PRK09669 putative symporter YagG; Provisional
Probab=97.97 E-value=1.7e-05 Score=76.81 Aligned_cols=135 Identities=10% Similarity=0.051 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH----hcccchhhhhHhHHHHHHHHHHHhhc
Q 020432 113 TRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW----TGQRLKAYYSAGGVLWVFCGAGILIL 188 (326)
Q Consensus 113 ~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k----~~gkkk~~~~~~~~l~~~~~~~l~~~ 188 (326)
.....+....|+++|+++++|.++...+.+..+..+...+..++.+.++. |+||||.....+.....+...+++..
T Consensus 21 ~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~ 100 (444)
T PRK09669 21 CNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT 100 (444)
T ss_pred hhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC
Confidence 34445556789999999999987766666666555556666666666653 46765665555555544444444444
Q ss_pred CCcc----hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhc-CCCCCceEEEehhHHHHHHHhhHHHH
Q 020432 189 PMNM----SAFMYVLAIFVGIANALMMVTGISMQNVLVG-EDLSGCAFVCGTLSFLDKMSCGIAVY 249 (326)
Q Consensus 189 ~~~~----~~~~l~~~~~~g~g~~~~~~~~~am~aD~id-~~~r~~g~i~s~~sf~~Kl~~~i~~~ 249 (326)
|..+ ....++...+.+.+.+..+.-..++.+|..+ +++|. -..+......-+|..++..
T Consensus 101 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~--~l~~~r~~~~~~G~~i~~~ 164 (444)
T PRK09669 101 PDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERH--SLQSWRFALSFIGGLIVSV 164 (444)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 4211 2334444555666776677777899999884 45553 3356666666676655544
No 169
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.96 E-value=0.00017 Score=70.55 Aligned_cols=143 Identities=13% Similarity=0.037 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
.+.+.+++..+..+......+.+ ...+|.++.....+.....++.+++.++.+++.+|.|| |+.+..+.++..++.+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~ 101 (496)
T PRK03893 24 AAWLGYLLDGFDFVLITLVLTEV-QGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGR-RLAMVISIVLFSVGTLA 101 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHH
Confidence 34445555555555555555554 45567655445555556667778888999999988886 55666666665555544
Q ss_pred HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 185 ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 185 l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
+.+. ++.+.+++...+.|++.+.......+++.|..+.++| +...+.......+|..++..+.+.
T Consensus 102 ~~~~--~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r--~~~~~~~~~~~~~g~~~~~~~~~~ 166 (496)
T PRK03893 102 CGFA--PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLR--NKASGFLISGFSIGAVVAAQVYSL 166 (496)
T ss_pred HHHH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 3456677777888999888888888999999987666 344566666666766555544443
No 170
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.96 E-value=0.0028 Score=61.52 Aligned_cols=228 Identities=10% Similarity=-0.016 Sum_probs=122.9
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeec-CC--------
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTE-EP-------- 78 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tk-E~-------- 78 (326)
+++||.+.+++=..+..+|.++...+...+. .+| . +.|+....+--...++..++.++.-+ +|
T Consensus 144 P~kER~ratsi~~sg~~vG~~Ia~~L~qll~-s~g-----W--r~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~ 215 (511)
T TIGR00806 144 PPSRYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLG-----W--ISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLE 215 (511)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcC-----c--hhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhcccc
Confidence 5899999999999999999888766654432 222 2 34444433322222222222222111 11
Q ss_pred ----------CcccCCCC-------C-------cchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 020432 79 ----------RLKMGLRG-------N-------SHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 134 (326)
Q Consensus 79 ----------~~~~~~~~-------~-------~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~ 134 (326)
...+++++ | .....+++...+|+..+.-.+.+.+..++......|.-.-.+..-..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~ 295 (511)
T TIGR00806 216 DVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDES 295 (511)
T ss_pred ccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCC
Confidence 00000000 0 01244667778999988777777777777666654444333333221
Q ss_pred CcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHH
Q 020432 135 GQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTG 214 (326)
Q Consensus 135 ~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~ 214 (326)
.+.+.+.+=.+..+.+.++++..+.+.-+.. +..-..++.+-..-++++++..-.++.+..++.-++.+.......++.
T Consensus 296 ~~~yNG~veA~~tllga~~a~~ag~~~~~w~-~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia 374 (511)
T TIGR00806 296 LNKYNGAVDAASTLLGAITSFIAGFVNIRWA-RWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIA 374 (511)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHhhcCCch-hhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 1224444444455556666677777632222 111122222222223333333334677888888888888777777777
Q ss_pred HHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 215 ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 215 ~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
.+-+|...+.|. -|++|++|+|.-=+-+.+
T Consensus 375 ~~~iA~~L~~~~--~aLvFGiNtfvAl~LQti 404 (511)
T TIGR00806 375 TFQIASSLSKEL--CALVFGINTFVATALKTI 404 (511)
T ss_pred HHHHHHHhcccc--eEEEEecHHHHHHHHHHh
Confidence 776666665544 399999999975444433
No 171
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.95 E-value=0.00032 Score=67.54 Aligned_cols=101 Identities=16% Similarity=0.056 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcc------hhHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 145 IIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNM------SAFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 145 ~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~------~~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
...++..++.++.+++.+|+|| |+.+..+..++.++.+...+.+... +..+++.-++.|+|.|...+...+++
T Consensus 71 ~~~~~~~ig~~~~G~l~Dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 71 AGFLMRPIGGWLFGRIADKHGR-KKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH
Confidence 4455566888999999999996 6667777777766666555544221 22455566788999999999999999
Q ss_pred HhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
+|..++++| |...+......-.|..++.
T Consensus 150 ~e~~p~~~r--g~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 150 SEVAVEGRK--GFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred HHhCCCCcc--cHHHHHHHHHHHHHHHHHH
Confidence 999988777 5545555555544444433
No 172
>PRK09952 shikimate transporter; Provisional
Probab=97.95 E-value=0.00047 Score=66.67 Aligned_cols=146 Identities=8% Similarity=-0.025 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccchhhh-----HHHHHHHHHHHHHHHHHHHhcccchhhhhHhH
Q 020432 103 YYQVALVYMLTRLVVNVSQAYLAFYVINDL--RMGQSAKALVP-----AIIYICSFIVSILLQEMAWTGQRLKAYYSAGG 175 (326)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l--~~~~~~~~~~~-----~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~ 175 (326)
+....+.+++...-....+...+.+..+.+ +.++. ..... ....+...++.++.+++.+|+|| |+.+..+.
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Gr-r~~l~~~~ 101 (438)
T PRK09952 24 ALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGR-KRMLMLTV 101 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcc-HHHHHHHH
Confidence 333334445544444444455555555543 33222 22211 12334456777888899999996 66677777
Q ss_pred HHHHHHHHHHhhcCCcc------hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHH
Q 020432 176 VLWVFCGAGILILPMNM------SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVY 249 (326)
Q Consensus 176 ~l~~~~~~~l~~~~~~~------~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~ 249 (326)
.++.++..+..+.+... +..+++.-.+.|++.+...+...+.+.|..+.++| |...+......-+|..++..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~r--g~~~~~~~~g~~~G~~l~~~ 179 (438)
T PRK09952 102 WMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKK--AFYSSGVQVGYGVGLLLSTG 179 (438)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCC--cHHHHHHHHHHHHHHHHHHH
Confidence 77776666665554321 11344556678999988888888899999998777 66666666666666555544
Q ss_pred hhh
Q 020432 250 VLQ 252 (326)
Q Consensus 250 i~~ 252 (326)
+..
T Consensus 180 ~~~ 182 (438)
T PRK09952 180 LVS 182 (438)
T ss_pred HHH
Confidence 444
No 173
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.92 E-value=6.5e-05 Score=76.15 Aligned_cols=125 Identities=14% Similarity=0.160 Sum_probs=86.6
Q ss_pred HHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC----------------
Q 020432 127 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM---------------- 190 (326)
Q Consensus 127 Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~---------------- 190 (326)
-++..++.+....+.+.....++..++.+++.++..|++| |+.+.++++++.++.+++. +|+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r-~~~i~~g~ll~~lg~ll~a-lphf~~~~y~~~~~~~~~~ 135 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHR-PIVIGIGCAIMGLGSFLLS-LPHFLSGRYSYSTTVSSTG 135 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCc-ceEEEecHHHHHHHHHHHh-ChHHhcCCccccccccccc
Confidence 4445566655445555556677778888888888888886 4456777767666655442 221
Q ss_pred ---------------------------------c-chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 191 ---------------------------------N-MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 191 ---------------------------------~-~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
+ ....+++.-++.|+|.+...+...+++.|.++.++| +...|..
T Consensus 136 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~--~~~~~i~ 213 (633)
T TIGR00805 136 NLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNS--PLYIGIL 213 (633)
T ss_pred cccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcccc--HHHHHHH
Confidence 0 122345677889999999999999999999988776 6778888
Q ss_pred HHHHHHHhhHHHHhhhhcc
Q 020432 237 SFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 237 sf~~Kl~~~i~~~i~~~~l 255 (326)
....-+|.++|..+.+++.
T Consensus 214 ~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 214 ESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred HHHHHhhhHHHHHHHHHHH
Confidence 8888888777766665544
No 174
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.89 E-value=0.00014 Score=69.79 Aligned_cols=112 Identities=13% Similarity=0.047 Sum_probs=81.0
Q ss_pred ccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHH
Q 020432 137 SAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM-NMSAFMYVLAIFVGIANALMMVTGI 215 (326)
Q Consensus 137 ~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~ 215 (326)
...+.+.....++..++.++++++.+|+|| |+.+..+.+++.++..+..+.+. .+.+.+++...+.|+|.+.......
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~~g~l~d~~gr-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 71 SLWGLVVSIFLVGGFIGALFAGWLSDRFGR-KKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHhhhhhhh-HHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 344566667778888999999999999996 66677777666665555443332 2234667777889999999999999
Q ss_pred HHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhh
Q 020432 216 SMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 216 am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
++++|..+.++| |...+......-+|..++..+.
T Consensus 150 ~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 150 MYLSEIAPKALR--GALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHccCChhhh--hhhhhHHHHHHHHHHHHHHHHH
Confidence 999999988777 5556777777777766666554
No 175
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.88 E-value=0.00041 Score=66.57 Aligned_cols=134 Identities=11% Similarity=0.102 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcch
Q 020432 114 RLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS 193 (326)
Q Consensus 114 ~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~ 193 (326)
.+........+|. ....++.+............++..++.++++++.+|+|| |+.+..+.+++.++.....+. ++.
T Consensus 29 ~~~~~~~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~a--~~~ 104 (413)
T PRK15403 29 YLTTDLIQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGR-RPVLITGALIFTLACAATLFT--TSM 104 (413)
T ss_pred HHHHHhhccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCc-hHHHHHHHHHHHHHHHHHHHc--CCH
Confidence 3344444445554 344556544444444455667778888899999999996 556777776665555444432 345
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 194 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 194 ~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
..+++.-++.|++.+......++.++|..+++++.. ..+.......++..+|..+.+.
T Consensus 105 ~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~lg~~ 162 (413)
T PRK15403 105 TQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIK--LMAIITSIVLVAPIIGPLSGAA 162 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
Confidence 566667777888877666677788888887655422 3566666666776666544443
No 176
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.87 E-value=0.00095 Score=64.19 Aligned_cols=111 Identities=13% Similarity=0.055 Sum_probs=75.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
.+.+++++.+........+++.|+++.+|.+....+++.....++.+++.++++++.+|.||||+....+.++..+....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~ 85 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF 85 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 35667888888888888999999999888877777888778888999999999999988765566666655554443333
Q ss_pred HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHH
Q 020432 185 ILILPMNMSAFMYVLAIFVGIANALMMVTGISM 217 (326)
Q Consensus 185 l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am 217 (326)
..+. ++.+..++...+.|++.+...+...++
T Consensus 86 ~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~l 116 (418)
T TIGR00889 86 AAQV--TTPAGMFPVLLANSLAYMPTIALTNSI 116 (418)
T ss_pred HHHh--cCHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3332 234444445455566555444444443
No 177
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.87 E-value=0.00045 Score=67.97 Aligned_cols=112 Identities=10% Similarity=0.046 Sum_probs=82.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCc----chhHHHHHHHHHhhHHHHHHHHH
Q 020432 139 KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMN----MSAFMYVLAIFVGIANALMMVTG 214 (326)
Q Consensus 139 ~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~----~~~~~l~~~~~~g~g~~~~~~~~ 214 (326)
.+.+.....++.+++.++++++.+|+|| |+.+..+.++..++..+..+.+.. +...+++.-++.|++.+...+..
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Gr-r~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~ 136 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKLGR-KRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLS 136 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc-HHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence 3455566778889999999999999996 556677666666555544443321 13456667778899999999999
Q ss_pred HHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 215 ISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 215 ~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
..+++|..+.+.| |...+.......+|..++..+...
T Consensus 137 ~~~~~e~~p~~~R--g~~~~~~~~~~~~g~~~g~~~~~~ 173 (502)
T TIGR00887 137 AIITSEFATKKWR--GAMMAAVFAMQGFGILAGAIVALI 173 (502)
T ss_pred HHHHHHhcChhhH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888 566788888888887776655443
No 178
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.87 E-value=0.00061 Score=64.45 Aligned_cols=145 Identities=10% Similarity=0.057 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
+....|++.+.+......++|.|.++ .|.+....+.......+..+++.++++++.+|.+|++...........+...
T Consensus 8 ~~~~~~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~- 85 (382)
T PRK11128 8 WLALSYFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLFAV- 85 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHHHH-
Confidence 34455677777777788888889866 4666666666666777778888888888887777522111111111111111
Q ss_pred HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 185 ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 185 l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
.+....++.+.+++...+.|++.+...+...++.+|..+++.|. ++......-+|.++|..+.+++.
T Consensus 86 ~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~~~~~a----~~~~~~~~~lg~~igp~lgg~l~ 152 (382)
T PRK11128 86 AFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTWQKQIGLD----YGKVRLWGSIAFVIGSALTGKLV 152 (382)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHhhccCC----cchHHHHHHHHHHHHHHHHHHHH
Confidence 22222344566666666677777777777888888875443332 34445555677788877777653
No 179
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.86 E-value=4e-05 Score=73.05 Aligned_cols=153 Identities=10% Similarity=0.095 Sum_probs=90.2
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHH
Q 020432 98 FKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVL 177 (326)
Q Consensus 98 ~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l 177 (326)
.||+++++....+++.+........+++.|+++..|.+++..+.+..+..+..++..++.+.+..|.|+||++...-..+
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 58999999999999999999999999999999988987777788877888888898999999998888767654332222
Q ss_pred HH-HHHHHH-hhcC--Ccchh-HHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 178 WV-FCGAGI-LILP--MNMSA-FMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 178 ~~-~~~~~l-~~~~--~~~~~-~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.. .+.... .+.| ..+.. ..++..+..+++.....+..-+...+.. |+.++=|+=.-..--+|.+++..+.|
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s----r~~~feYG~~R~wGSig~ai~s~~~G 159 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS----RRNGFEYGRARMWGSIGFAIASLLAG 159 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH----HHHSS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH----HHhcCCcchHHHHhhHHHHHHHHHhh
Confidence 11 121222 2222 12221 1122223334433333444433322222 33344455444455566677666666
Q ss_pred hc
Q 020432 253 SY 254 (326)
Q Consensus 253 ~~ 254 (326)
.+
T Consensus 160 ~L 161 (412)
T PF01306_consen 160 IL 161 (412)
T ss_dssp HH
T ss_pred ee
Confidence 55
No 180
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.86 E-value=0.0004 Score=64.43 Aligned_cols=124 Identities=12% Similarity=-0.007 Sum_probs=76.2
Q ss_pred HHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHH
Q 020432 122 AYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAI 201 (326)
Q Consensus 122 ~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~ 201 (326)
...| +++..+|.++...+.......++..++.++++++.+|+|| |+.+..+..+..++.....+. ++.+.+++...
T Consensus 24 ~~~~-~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~-r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 99 (377)
T TIGR00890 24 LLAP-PLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGP-RAVAMLGGILYGLGFTFYAIA--DSLAALYLTYG 99 (377)
T ss_pred hHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCc-cchhHHhHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 3444 4455677766666777777788889999999999999996 556677776666555444443 34455666666
Q ss_pred HHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 202 FVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 202 ~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
+.|++.+...........|..+ ++| |...+......-+|..+++.+.+
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~g~~~~~~~~~ 147 (377)
T TIGR00890 100 LASAGVGIAYGIALNTAVKWFP-DKR--GLASGIIIGGYGLGSFILSPLIT 147 (377)
T ss_pred HHhHHHHHHHHhHHHHHHHHcC-ccc--HHHHHHHHHhcchhHhHHHHHHH
Confidence 7888877665544444444443 233 44455555555555444444444
No 181
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.82 E-value=5.9e-05 Score=72.79 Aligned_cols=144 Identities=8% Similarity=0.148 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHH----HHhcccchhhhhHhHHHHHHHHHH
Q 020432 109 VYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM----AWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l----~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
..+.........+.|++||++++.|.++...+.+.++.=+--.+.-|+.+.+ .+|+||+|.-...+....++...+
T Consensus 20 gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l 99 (467)
T COG2211 20 GDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVL 99 (467)
T ss_pred hhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHH
Confidence 3445566667788999999999999876555555554444444444555544 346787666555655554444444
Q ss_pred HhhcCC----cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-CCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 185 ILILPM----NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE-DLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 185 l~~~~~----~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++..|+ ......++...+.+++.+..+.=.+|+.++..++ ++| .- ..|...+..++|..+...+...+
T Consensus 100 ~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER-~~-l~s~R~~~~~~g~~l~~~~~~pl 172 (467)
T COG2211 100 LFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQER-AS-LTSWRMVFASLGGLLVAVLFPPL 172 (467)
T ss_pred HHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 554442 2345677778888999998888889999999865 455 33 48888888888876665555443
No 182
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=97.79 E-value=0.00013 Score=70.90 Aligned_cols=113 Identities=12% Similarity=-0.044 Sum_probs=80.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 139 KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 139 ~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
.+.+.....++..++.++.+++.+|+|+ |+....+.+++.++..+..+....+....++.-++.|++.+...+...+++
T Consensus 78 ~g~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~ 156 (465)
T TIGR00894 78 QGLILSSHFYGQIIIQIPVGYLAGKYVF-KWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKII 156 (465)
T ss_pred hhHHHHHHHHHHHHHHcchHHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHH
Confidence 4555556667788888999999988886 555666665555544433222222344566667788999988888888999
Q ss_pred HhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+|..+.++| |...+......-+|..++..+.+.+
T Consensus 157 ~~~~~~~~r--~~~~~~~~~~~~~g~~i~~~l~~~l 190 (465)
T TIGR00894 157 VKWAPPKER--SRLLGMSTSGFQLGTFIFLPISGWL 190 (465)
T ss_pred HhcCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999987777 5667888888888888887777754
No 183
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=97.79 E-value=0.00052 Score=67.04 Aligned_cols=144 Identities=15% Similarity=0.062 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH----hcccchhhhhHh-HHHHHHH
Q 020432 107 ALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW----TGQRLKAYYSAG-GVLWVFC 181 (326)
Q Consensus 107 ~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k----~~gkkk~~~~~~-~~l~~~~ 181 (326)
....+-.++.......+.+.|.+ .+|.++.....+..+..+..++..++.+.++. |+|||| .++.+ ....+++
T Consensus 10 ~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr-p~il~g~~~~~~~ 87 (477)
T TIGR01301 10 ASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR-PFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH-HHHHHHHHHHHHH
Confidence 34455556677777788888764 46776555556656666777777888888885 689755 45553 4333334
Q ss_pred HHHHhhcCC-----------cc-h---hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 182 GAGILILPM-----------NM-S---AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 182 ~~~l~~~~~-----------~~-~---~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
..++.+.+. .+ . ....+...+..++....+.-.-|+++|.+++++|+.+.-++..++..-+|..+
T Consensus 88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il 167 (477)
T TIGR01301 88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL 167 (477)
T ss_pred HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 334333221 00 1 11122223344566666777789999999987665455577888888887766
Q ss_pred HHHhhh
Q 020432 247 AVYVLQ 252 (326)
Q Consensus 247 ~~~i~~ 252 (326)
|..+-+
T Consensus 168 g~~~g~ 173 (477)
T TIGR01301 168 GYAAGA 173 (477)
T ss_pred HHHHHH
Confidence 655444
No 184
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.78 E-value=0.004 Score=60.71 Aligned_cols=215 Identities=11% Similarity=0.024 Sum_probs=114.3
Q ss_pred cccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCc---
Q 020432 4 CITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL--- 80 (326)
Q Consensus 4 ~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~--- 80 (326)
|+++| +-|-.+++.-.++..+|.++...+.. .+.+| + ...|.+.-...++.+++..... ..+.|.++
T Consensus 143 E~sP~-~~RG~~g~~~~~~~~~g~ll~~~~~l--~~ilG-----t-~~~W~~l~~~~~i~~~~~l~~l-~~~PESPk~Ll 212 (485)
T KOG0569|consen 143 EISPK-NLRGALGTLLQIGVVIGILLGQVLGL--PSLLG-----T-EDLWPYLLAFPLIPALLQLALL-PFLPESPKYLL 212 (485)
T ss_pred hcChh-hhccHHHHHHHHHHHHHHHHHHHHcc--HHhcC-----C-CcchHHHHHHHHHHHHHHHHHH-hcCCCCcchHH
Confidence 44444 45777777777777777776655432 23333 2 3567665444444444433332 23555221
Q ss_pred --ccC--------------C--CC-----------C-cc--hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHH----HHH
Q 020432 81 --KMG--------------L--RG-----------N-SH--ARISWAYWFKKILYYQVALVYMLTRLVVNVSQ----AYL 124 (326)
Q Consensus 81 --~~~--------------~--~~-----------~-~~--~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~----~~~ 124 (326)
+++ + ++ + .. -...++++++|+..++-...-+....+....+ .++
T Consensus 213 ~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Y 292 (485)
T KOG0569|consen 213 IKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFY 292 (485)
T ss_pred HHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHH
Confidence 000 0 00 0 00 12368899999998876444333444444332 233
Q ss_pred HHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHh---hcCCcc-hhHHH-HH
Q 020432 125 AFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGIL---ILPMNM-SAFMY-VL 199 (326)
Q Consensus 125 ~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~---~~~~~~-~~~~l-~~ 199 (326)
-..+-.+.|.++...........+..++..+..+.+.+|.|| |.+.+.+..++.+..+++. ++.... .+..+ .+
T Consensus 293 st~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gR-RpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 293 STSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGR-RPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 333334446654444455556667778888888889999995 7777777766554443332 111111 22221 12
Q ss_pred HHHHh--hHHHH-HHHHHHHHhHhhhcCCCCCc
Q 020432 200 AIFVG--IANAL-MMVTGISMQNVLVGEDLSGC 229 (326)
Q Consensus 200 ~~~~g--~g~~~-~~~~~~am~aD~id~~~r~~ 229 (326)
.++.. ...+. ..+++|-+.+|.++.+.|..
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~a 404 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSA 404 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHH
Confidence 22221 22211 24699999999999988854
No 185
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=97.74 E-value=0.0013 Score=64.09 Aligned_cols=132 Identities=10% Similarity=0.024 Sum_probs=84.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHH
Q 020432 101 ILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVF 180 (326)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~ 180 (326)
|.+....+.+...+......+...+..-+..+|.++...+....+..+...+.-.+.+++.+|+|. |+.+..+.+++.+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~-R~v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGG-RRWTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-hHHHHHHHHHHHH
Confidence 455555566677777777777777777665677766555555444445555555666888888885 4456666666555
Q ss_pred HHHHHhhc---CCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 181 CGAGILIL---PMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 181 ~~~~l~~~---~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
....+.+. ..++...+++..++.|++ +.........++..-++++| |...|.+
T Consensus 113 ~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~r--G~A~Gi~ 168 (462)
T PRK15034 113 PCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQ--GSALGIN 168 (462)
T ss_pred HHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHh--HHHHHHH
Confidence 55544442 113456777778888887 55666677777777776666 5545555
No 186
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.73 E-value=0.00025 Score=68.34 Aligned_cols=129 Identities=12% Similarity=0.076 Sum_probs=85.9
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcccchhhhHHHHHHHHHHHHHHHHHH-HhcccchhhhhH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLR----MGQSAKALVPAIIYICSFIVSILLQEMA-WTGQRLKAYYSA 173 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~----~~~~~~~~~~~~~~i~~~i~~~~~~~l~-k~~gkkk~~~~~ 173 (326)
+-|+++.+...-+.-+++..++.+.+.+|+.+.++ .++...........-..-....+.++++ |..|+ |++.+.
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~-~~tI~l 97 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT-RRTIVL 97 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch-hHHHHH
Confidence 35666777778888899999999999999999888 5443222211111111223334455677 44575 667788
Q ss_pred hHHHHHHHHHHHhhcCC-cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-CCCCc
Q 020432 174 GGVLWVFCGAGILILPM-NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE-DLSGC 229 (326)
Q Consensus 174 ~~~l~~~~~~~l~~~~~-~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-~~r~~ 229 (326)
|.++.+++-+++. .++ ..+..+++...++++|.|..=....++++|.-++ |.|++
T Consensus 98 Gail~~iGh~~L~-~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 98 GAILMAIGHLVLA-ISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHHh-ccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC
Confidence 8877666655544 342 3456777777788899998888888899999976 44554
No 187
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.69 E-value=0.0022 Score=60.67 Aligned_cols=147 Identities=8% Similarity=0.084 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHH
Q 020432 104 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGA 183 (326)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~ 183 (326)
+.+.+.++..+........++|.|.++ .|.+....+.+.....+...++.+++.++.+|.+|++...........+...
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~ 85 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA 85 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 334566777777777788888899865 5765555666666667777888888988887776422111111111111111
Q ss_pred HHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhccc
Q 020432 184 GILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQS 256 (326)
Q Consensus 184 ~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~ 256 (326)
.+.. ..++.+.+++...+.+.+.+...+...++..|-. ++| +.-++......-+|..++..+.+.+.+
T Consensus 86 ~~~~-~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~~--~~~--~~~~g~~~~~~slG~~~g~~l~g~l~~ 153 (382)
T TIGR00902 86 AFSA-GAHNAWLLFIAIGLFALFFSAGMPIGDALANTWQ--KQF--GLDYGKVRLIGSAAFIIGSALFGGLIG 153 (382)
T ss_pred HHHH-hhhhHHHHHHHHHHHHHHHccchhHHHHHHHHHH--HHc--CCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 1221 2244555555655667666666666666654431 222 444777766666787777777776643
No 188
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.0013 Score=59.22 Aligned_cols=154 Identities=10% Similarity=0.123 Sum_probs=100.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
.+|||.+.+.-++...+..=.-+.-+.++++..|+++.....+.......+.+.++..+.+..|.|| +...+.+..+..
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~-n~~wv~~a~~~t 341 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGF-NLWWVASACILT 341 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcc-eehhHHHHHHHH
Confidence 3677776665556666555555667788899988864333333333344456667778888888885 544454444433
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCC
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~ 259 (326)
+..=.+.+...-++ +..+.+.|+..+......|.++|-+|+++.- |.-|+...-++.+|.++-..+.|.+.+..|
T Consensus 342 l~~H~~l~Ft~lsP---y~~m~~lGLsysllAcslWP~va~~vpE~qL--GTaygf~qsIqNLgla~i~Iiag~i~d~~g 416 (459)
T KOG4686|consen 342 LLGHSGLFFTFLSP---YTSMTFLGLSYSLLACSLWPCVASLVPEEQL--GTAYGFIQSIQNLGLAFIPIIAGFIADGDG 416 (459)
T ss_pred HHHhhhHHhhhccH---HHHHHHHhhhHHHHHHHHhhhhhhhCCHHHh--cchHHHHHHHHhhhhhHHhhhhheeecCCC
Confidence 33322222221222 3455677777776667799999999998665 666888999999999998888887765444
No 189
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.65 E-value=0.0028 Score=62.23 Aligned_cols=104 Identities=9% Similarity=0.049 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcch------hHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 145 IIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS------AFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 145 ~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~------~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
...++..++.++.+++.+|+|| |+.+..+.+++.++.++..+.+.... ..+++.-++.|+|.|...+...+++
T Consensus 65 ~~~l~~~ig~~~~G~l~Dr~Gr-r~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~ 143 (490)
T PRK10642 65 VPFLIRPLGGLFFGMLGDKYGR-QKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFV 143 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHH
Confidence 4456677888999999999996 66788888777777666666553211 1245556678999999999999999
Q ss_pred HhhhcCCCCCceEEEehhHHHHHHHhhHHHHhh
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
+|..+.++| |...+......-+|..++..+.
T Consensus 144 ~e~~p~~~R--g~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 144 AEYSPDRKR--GFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHhCCCCCC--cHHHHHHHHHHHHHHHHHHHHH
Confidence 999988777 6555666655555555555443
No 190
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=97.59 E-value=0.0029 Score=61.97 Aligned_cols=83 Identities=17% Similarity=0.043 Sum_probs=55.5
Q ss_pred HHHHHHHHHHH---HHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHh
Q 020432 144 AIIYICSFIVS---ILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNV 220 (326)
Q Consensus 144 ~~~~i~~~i~~---~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD 220 (326)
....++.++.. ++.+.++.+.++||+.......+..+....+++.++++.....+..++.-++.+.......|++||
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~ 153 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPD 153 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 34444444444 444455777776666555545555556666676666666666666667778889999999999999
Q ss_pred hhcCCC
Q 020432 221 LVGEDL 226 (326)
Q Consensus 221 ~id~~~ 226 (326)
+.++++
T Consensus 154 la~~~~ 159 (477)
T PF11700_consen 154 LARPEP 159 (477)
T ss_pred hcCCCh
Confidence 997654
No 191
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.57 E-value=0.0022 Score=60.73 Aligned_cols=118 Identities=8% Similarity=0.022 Sum_probs=79.2
Q ss_pred HHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHH
Q 020432 130 NDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANAL 209 (326)
Q Consensus 130 ~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~ 209 (326)
...+++.+.+..+.....++-=++-++.+.++.|.+- |..+..|+++.++..+++.+.+ +...+.+..++.|+.+|.
T Consensus 57 e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~np-r~fm~~gLilsai~nil~Gfs~--s~~~~~~l~~lng~fQg~ 133 (448)
T COG2271 57 EDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNP-RYFMAFGLILSAIVNILFGFSP--SLFLFAVLWVLNGWFQGM 133 (448)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC-ceeehHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhcC
Confidence 3333444456666667777777777888888877663 5455666655545545555433 445566666777777766
Q ss_pred HHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 210 MMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 210 ~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
-.+-+..+++.--+.++| |...|+++-+..+|.++...+..
T Consensus 134 Gwpp~~~~i~~Wfsr~eR--G~~~siWn~shNiGGal~~~~~~ 174 (448)
T COG2271 134 GWPPCARTITHWFSRKER--GTWWSIWNTSHNIGGALAPLVAL 174 (448)
T ss_pred CCcHHHHHHHHHcCcccc--CceEEEehhhhhcccchHHHHHH
Confidence 555555566555566677 88899999999999999888874
No 192
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=97.54 E-value=0.0017 Score=61.68 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHH
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 200 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~ 200 (326)
+...|. ++..+|.++...+.......++..++.++.+++.+|+|+ |+++..+..+++++.+...+.+ +.+.+++..
T Consensus 29 ~~~lp~-i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~-r~~l~~~~~l~~~~~~~~~~a~--~~~~ll~~r 104 (393)
T PRK09705 29 GPLLPQ-LRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSE-RRSVAISLLLIAVGALMRELYP--QSALLLSSA 104 (393)
T ss_pred chhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCc-hHHHHHHHHHHHHHHHHHHHCc--chHHHHHHH
Confidence 344444 445566655555565566667778888999999999985 6678888888777766666543 455666777
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 201 IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 201 ~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++.|+|.+.......+++.|.-+ ++| +...+.++...=.|.+++..+.+++
T Consensus 105 ~l~Gig~~~~~~~~~~~~~~~~~-~~~--~~~~g~~~~~~~~g~~~g~~~~~~l 155 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSVIKRRFQ-QRT--PLVMGLWSAALMGGGGLGAAITPWL 155 (393)
T ss_pred HHHHhHHHHHhhhhhHHHHHHcc-ccc--hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899998877777777777664 334 5667777777767777776665543
No 193
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.51 E-value=0.0026 Score=60.19 Aligned_cols=121 Identities=12% Similarity=0.125 Sum_probs=77.1
Q ss_pred HHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHH
Q 020432 128 VINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIAN 207 (326)
Q Consensus 128 ~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~ 207 (326)
++..+|.++...+.+.....++..++.++.+++.+|+|| |+.... ...+..........+ .+...+++.-++.|+|.
T Consensus 17 i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~gr-r~~~~~-~~~~~~~~~~~~~~~-~~~~~l~~~R~l~G~g~ 93 (368)
T TIGR00903 17 VAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFK-RWFLFG-SLATFAAAAGRLLDP-FNYEWLLACQLLAALGQ 93 (368)
T ss_pred HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-hHHHHH-HHHHHHHHHHHHHHh-ccHHHHHHHHHHHHhHh
Confidence 344566655555566556677778888889999988885 554443 333333322222222 35566777777888888
Q ss_pred HHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 208 ALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 208 ~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+. ....++.++|..++++| |...+......-+|..++..+...+
T Consensus 94 ~~-~~~~~~~~~~~~~~~~r--~~a~~~~~~~~~lG~~l~~~~~~~l 137 (368)
T TIGR00903 94 PF-LLNAFAPAASQIREERR--DLVISLLSFAMYLGIIFALAAGLKI 137 (368)
T ss_pred HH-HHHHHHHHHHHcCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 45556666888876666 5567788888888877776555543
No 194
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=97.48 E-value=0.0017 Score=63.10 Aligned_cols=127 Identities=11% Similarity=0.021 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHH
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 200 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~ 200 (326)
..+++.+ ...+|.++...+.......+...++.++.+++..|+|| |+.++.+.++..++.+...+. .+.+.+++..
T Consensus 39 ~~~~~~i-~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~-r~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~~ 114 (455)
T TIGR00892 39 TVFFKEL-QQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGC-RPVVIAGGLLASLGMILASFS--SNVIELYLTA 114 (455)
T ss_pred hhhHHHH-HHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCc-hHHHHhhHHHHHHHHHHHHHh--hhHHHHHHHH
Confidence 3444443 34556654444554445555567777888999988886 556676666655544444332 2333343333
Q ss_pred -HHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 201 -IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 201 -~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+.|++.+.......+++.|..+ ++| |...+......-++..++..+.+.+
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r--~~a~g~~~~~~~~g~~~~~~l~~~l 166 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-RRR--PLANGLAMAGSPVFLSTLAPLNQYL 166 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-hhH--HHHHHHHHhcccHHHHHHHHHHHHH
Confidence 56677777655556677778774 444 4445666666666666665555544
No 195
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=97.42 E-value=0.0018 Score=60.31 Aligned_cols=126 Identities=16% Similarity=0.079 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHH
Q 020432 121 QAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 200 (326)
Q Consensus 121 ~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~ 200 (326)
+..+|.+. +++|.++...+.......++..++.++.+++.+|+|| |+.+..+.++..++.... . . ++...+++..
T Consensus 20 ~~~lp~l~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~-~-~-~~~~~l~~~~ 94 (355)
T TIGR00896 20 GPLLPQIR-SALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGE-ERSVAAGLLLIAAGILIR-S-A-PGTALLFAGT 94 (355)
T ss_pred cccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCc-hHHHHHHHHHHHHHHHHH-H-h-ccHHHHHHHH
Confidence 34455544 4567666666666677778889999999999999996 555666665544443333 2 2 3445566667
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 201 IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 201 ~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
.+.|+|.+.......+++.|..++ +| |...+......-+|..++..+.+.+
T Consensus 95 ~~~g~g~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSLIKRDFPQ-RV--GLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred HHHHHHHHHHhccchHHHHHhCcc-hh--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778888887776666777776643 33 5556777776667766666655543
No 196
>PRK09848 glucuronide transporter; Provisional
Probab=97.37 E-value=0.00095 Score=64.58 Aligned_cols=117 Identities=9% Similarity=0.197 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHh----cccchhhhhHhHHHHHHHHHHHh
Q 020432 111 MLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWT----GQRLKAYYSAGGVLWVFCGAGIL 186 (326)
Q Consensus 111 ~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~----~gkkk~~~~~~~~l~~~~~~~l~ 186 (326)
+...........|+++|+++.+|.++...+.+..+..+...+..++++.++.| .||||.....+.....+...+++
T Consensus 18 ~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~ 97 (448)
T PRK09848 18 VANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVF 97 (448)
T ss_pred HHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHH
Confidence 33445555566788889999999877666776667777777778888887644 36555443444443333444433
Q ss_pred hcCCc---c--hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC-CCC
Q 020432 187 ILPMN---M--SAFMYVLAIFVGIANALMMVTGISMQNVLVGE-DLS 227 (326)
Q Consensus 187 ~~~~~---~--~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~-~~r 227 (326)
..+.+ . ....++...+.+++.+..++-..++.++..++ ++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r 144 (448)
T PRK09848 98 WVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSR 144 (448)
T ss_pred hCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHH
Confidence 33311 1 12233444566777777777677776666644 444
No 197
>PTZ00207 hypothetical protein; Provisional
Probab=97.37 E-value=0.0057 Score=61.32 Aligned_cols=118 Identities=4% Similarity=-0.075 Sum_probs=71.7
Q ss_pred HHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC----cchhHHHHHHHH
Q 020432 127 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM----NMSAFMYVLAIF 202 (326)
Q Consensus 127 Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~----~~~~~~l~~~~~ 202 (326)
.++..+|.++...+.+....... ....++.+++..|+|+ |+.+.++.+++.++.++..+... .+.+.+++..++
T Consensus 52 ~L~~~lgls~~~l~~i~svg~~~-g~~~lp~G~L~Dr~G~-R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l 129 (591)
T PTZ00207 52 AMQARYNLTQRDLSTITTVGIAV-GYFLLPYSFIYDYLGP-RPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGL 129 (591)
T ss_pred HHHHHhCcCHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHH
Confidence 56677777654444443332222 2234457888988885 66788888887777766655311 245566666777
Q ss_pred HhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHH
Q 020432 203 VGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVY 249 (326)
Q Consensus 203 ~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~ 249 (326)
.|+|.+...+.....+.+.-+ ++| |...|......-+|.++.+.
T Consensus 130 ~G~G~~~~~~~~~~~i~~~Fp-~~R--G~a~Gi~~~~~gLGsaI~~~ 173 (591)
T PTZ00207 130 MTLGCMLFDLGAVVTVLSVFP-SNR--GAVVAIMKTFTGLGSAILGS 173 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCh-hhh--HHHHHHHHHHHHHHHHHHHH
Confidence 888887776666666677654 344 66566665555555544333
No 198
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.37 E-value=0.003 Score=61.55 Aligned_cols=238 Identities=13% Similarity=0.038 Sum_probs=133.5
Q ss_pred ccccCCccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecCCCccc
Q 020432 3 NCITLNSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRLKM 82 (326)
Q Consensus 3 ~~lT~d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~~~ 82 (326)
+..+++.++|.|.+++-.+.+.++.... +.+.+.... .. ..|+..+..+..+..++....+.+..+|+..++
T Consensus 135 a~vadis~~~~R~~~~gll~~~~~~~~~--~~p~~~~~~-----~~-~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~ 206 (463)
T KOG2816|consen 135 AYVADISSEEERSSSIGLLSGTFGAGLV--IGPALGGYL-----VK-FLGIALVFLIAAASGILSLLYMLLFLPESLQEK 206 (463)
T ss_pred hheeeccchhHHHHHHHHHHHHHHHHHh--HHHHHHHHH-----HH-hcCchHHHHHHHHHHHHHHHHHhhccccccCcc
Confidence 3567788888888887777665553222 122221110 01 245555555556666666666667788865544
Q ss_pred CCC---------CC---cchhhhHHHHhh---chhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCCcccchhhhHHH
Q 020432 83 GLR---------GN---SHARISWAYWFK---KILYYQVALVYMLTRLVVNV-SQAYLAFYVINDLRMGQSAKALVPAII 146 (326)
Q Consensus 83 ~~~---------~~---~~~~~~l~~~~~---N~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~l~~~~~~~~~~~~~~ 146 (326)
+++ .+ ....+.++...+ .|..+.++...++....-.. .....++|.++.++.+++..+.+....
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~ 286 (463)
T KOG2816|consen 207 ERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLV 286 (463)
T ss_pred ccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHH
Confidence 332 01 111222333322 23333333322222222211 122457888888887666556555555
Q ss_pred HHHHHHHHHHHH-HHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC
Q 020432 147 YICSFIVSILLQ-EMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225 (326)
Q Consensus 147 ~i~~~i~~~~~~-~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~ 225 (326)
.+...++..+.. .+.+.++. |+....|+..-.+......+. .+.+.++...++. .......+..-++.+-.++.+
T Consensus 287 ~~~~~i~~l~~~~~l~~~l~~-~~~i~lGl~~~~~~~~~~af~--~~~w~~~~~~v~~-~~~~~~~pa~~s~~s~~v~~~ 362 (463)
T KOG2816|consen 287 SILGIISQLLLLPLLSSILGE-KRLISLGLLSEFLQLLLFAFA--TETWMMFAAGVVV-ALAGIVFPAIRAFASILVSPE 362 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHhh-hhHhhHHHHHHHHHHHHHHHh--ccchhhhHHHHHH-HhhcchhHHHHhHHHhhcccc
Confidence 566666666655 55777775 445566665444443444443 2345555444433 344456677777888888887
Q ss_pred CCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 226 LSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 226 ~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++ |-++++.+...+++..++..+.+.+
T Consensus 363 e~--g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 363 EQ--GKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred cc--cchhhHHHHHHHHhhhhhHHHHHHH
Confidence 77 8889999999999998888876644
No 199
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.34 E-value=0.002 Score=60.11 Aligned_cols=102 Identities=9% Similarity=-0.037 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcc------hhHHHHHHHHHhhHHHHHHHHHHHHhHhh
Q 020432 148 ICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNM------SAFMYVLAIFVGIANALMMVTGISMQNVL 221 (326)
Q Consensus 148 i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~------~~~~l~~~~~~g~g~~~~~~~~~am~aD~ 221 (326)
+...++.++.+++.+|+|| |+.+..+.++..++..+..+.+... ...+++..++.|++.+.......++++|.
T Consensus 46 ~~~~i~~~~~G~l~dr~g~-r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 124 (394)
T TIGR00883 46 LARPLGAIVFGHFGDRIGR-KKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEY 124 (394)
T ss_pred HHhhhHHHHhhhhhhhhhh-HHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhc
Confidence 3445677888899999986 5667777766666555555443211 11344555677888777777777889998
Q ss_pred hcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 222 VGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 222 id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.++++| |...+......-+|..++..+..
T Consensus 125 ~~~~~r--~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 125 APPGKR--GFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred CCcccc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777 55667777777777666655444
No 200
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.28 E-value=0.0091 Score=56.48 Aligned_cols=148 Identities=13% Similarity=0.078 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhh--HHHHHHHHHHHHHHHH-HHHhcccchhhhhHhHHHH-
Q 020432 103 YYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVP--AIIYICSFIVSILLQE-MAWTGQRLKAYYSAGGVLW- 178 (326)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~--~~~~i~~~i~~~~~~~-l~k~~gkkk~~~~~~~~l~- 178 (326)
+..+...|+.+.+-......+.|+|.++. |.+++..+.+. ....+..++.++++.+ ..+|.|+|| .++..+.+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~-g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~-~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED-GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRR-SWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcch-hHHHHHHHHH
Confidence 34556778888888888899999999876 66555454442 1224445555666644 356677544 444444221
Q ss_pred HHHHHHHhhc-CCcch-hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 179 VFCGAGILIL-PMNMS-AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 179 ~~~~~~l~~~-~~~~~-~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
......+... +..+. .+.+......++..+...+...++..|..+ +|+-+...+..+....+|..+|+...+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~--~~~~~~~~~~~~~g~~lG~~~g~~~~~~l 156 (390)
T TIGR02718 81 SACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFN--GRTLAKGNAVQIAGVMIGFFGGGAGTLVL 156 (390)
T ss_pred HHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--HhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2122223222 22221 222222222223332222232222222221 22225556667777777777777665554
No 201
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.26 E-value=0.029 Score=55.15 Aligned_cols=82 Identities=12% Similarity=0.088 Sum_probs=55.1
Q ss_pred hhHhHHHHHHHHHHHhhc----CC---cchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHH-HH
Q 020432 171 YSAGGVLWVFCGAGILIL----PM---NMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLD-KM 242 (326)
Q Consensus 171 ~~~~~~l~~~~~~~l~~~----~~---~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~-Kl 242 (326)
+.+|+++..++.+.+.+- .+ .++.++.....+.++|-=...++..|++++..+++-+ |...+.+-+.. -+
T Consensus 348 fa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~--g~~mg~w~l~~~~~ 425 (493)
T PRK15462 348 FALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVT--GVLTGIYMLLSGAI 425 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHH--HHHHHHHHHHHHHH
Confidence 456666655665554321 11 1345666667778888888889999999999998877 77788885534 36
Q ss_pred HhhHHHHhhhhc
Q 020432 243 SCGIAVYVLQSY 254 (326)
Q Consensus 243 ~~~i~~~i~~~~ 254 (326)
|..+++.+.+..
T Consensus 426 ~~~~~g~~~~~~ 437 (493)
T PRK15462 426 ANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHh
Confidence 666666665544
No 202
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.25 E-value=0.035 Score=53.57 Aligned_cols=140 Identities=11% Similarity=0.036 Sum_probs=75.4
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhh
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYS 172 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~ 172 (326)
.|+.-++.+-|+......++...... ....+.-|.+.. |.++..++.+-....+.++.+.+..|++.||.|- .++-.
T Consensus 251 ~w~~Y~~q~vflas~alalLY~TVLs-f~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl-vr~G~ 327 (432)
T PF06963_consen 251 GWRTYFRQPVFLASFALALLYFTVLS-FGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL-VRAGL 327 (432)
T ss_pred cHHHHHhCHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHH
Confidence 45556666666654433232222222 244455565555 7766666777777888889999999999998885 33444
Q ss_pred HhHHHH---HHHHHHHhhcCCcc--h--hHHHHHHH-HHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhH
Q 020432 173 AGGVLW---VFCGAGILILPMNM--S--AFMYVLAI-FVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLS 237 (326)
Q Consensus 173 ~~~~l~---~~~~~~l~~~~~~~--~--~~~l~~~~-~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~s 237 (326)
.+...- ...++..++.+.++ . ...++..+ +.=+|.=+.=....=++.|.||+++| |.+++...
T Consensus 328 ~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~R--g~v~gvq~ 398 (432)
T PF06963_consen 328 WSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESER--GAVSGVQN 398 (432)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHh--hHHHHHHH
Confidence 444321 12223333444322 1 12222222 22244433334555578888888777 55555533
No 203
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.23 E-value=0.019 Score=54.55 Aligned_cols=155 Identities=13% Similarity=0.039 Sum_probs=98.4
Q ss_pred HHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHH
Q 020432 124 LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFV 203 (326)
Q Consensus 124 ~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~ 203 (326)
...=+..++|.+.......-.....+..+++++...+++|..| |+.....+.+++++-++-.+-| +...+++.-++.
T Consensus 35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~R-r~lLl~~l~lFi~~n~l~alAp--~f~~Ll~aR~~~ 111 (394)
T COG2814 35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLER-RRLLLGLLALFIVSNLLSALAP--SFAVLLLARALA 111 (394)
T ss_pred chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHH
Confidence 3344555667654333333344455667777777788888885 5566665666666655555433 456677778889
Q ss_pred hhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCcccccc
Q 020432 204 GIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTS 283 (326)
Q Consensus 204 g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~ 283 (326)
|+..|.++.+..++.+|.+++++|..++ +......-++.-+|..+-.++ . .
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~~~~~Ai--aiv~~G~tlA~v~GvPLGt~i-------g----------------~---- 162 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPGKRGRAL--ALVFTGLTLATVLGVPLGTFL-------G----------------Q---- 162 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCccchhhHH--HHHHHHHHHHHHHhccHHHHH-------H----------------H----
Confidence 9999999999999999999998876543 333333333333333332222 1 1
Q ss_pred ccceeeeecchHhHHHHHHHHHHHhhcc
Q 020432 284 YISVTRFGLGLIPAICSLVSVAVTFTMK 311 (326)
Q Consensus 284 ~~~~i~~~~~~iP~~~~l~~~i~~~~y~ 311 (326)
..|.|..|..+-.+..+..+......|
T Consensus 163 -~~GWR~~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 163 -LFGWRATFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred -HhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 367888887777776666666666667
No 204
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.19 E-value=0.017 Score=56.46 Aligned_cols=145 Identities=13% Similarity=0.023 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcc---c-chhhhhHhHHHHHHH
Q 020432 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQ---R-LKAYYSAGGVLWVFC 181 (326)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~g---k-kk~~~~~~~~l~~~~ 181 (326)
+...|+...+. .......++|+++++|.++.....+.....+...+- ++|++++.+++ + ||+.+.++.++..
T Consensus 31 ~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K-~l~g~l~D~~~i~G~rRr~~l~~~~~l~~-- 106 (468)
T TIGR00788 31 GLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALK-PFAGVMSDTFPLFGYTKRWYLVLSGLLGS-- 106 (468)
T ss_pred HHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCCCccchHHHHHHHHHHH--
Confidence 34467766666 777788888888888987655544444444555553 44888887663 3 4544444443331
Q ss_pred HHHHhhcC--CcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 182 GAGILILP--MNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 182 ~~~l~~~~--~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
...+..++ ++......+...+.+++.+..-+..-++..|..+++.+..+-..+..-....+|..+|..+.|.+
T Consensus 107 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 107 AILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 12222222 23233333356677888888888999999999983333223334443333445655555555543
No 205
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.16 E-value=0.026 Score=56.55 Aligned_cols=98 Identities=10% Similarity=0.058 Sum_probs=67.9
Q ss_pred HHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHh
Q 020432 125 AFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVG 204 (326)
Q Consensus 125 ~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g 204 (326)
+.|...++|.++ ...++.....++.-+..++.++++..+|| |+.++.+.++.+++.++.-- ..+...+....++.|
T Consensus 67 l~~I~~diG~~~-~~~w~~~~~~l~~av~~~~~G~LSDlfGR-r~~~i~g~~l~vvG~Iv~at--A~~~~~~iag~~l~G 142 (599)
T PF06609_consen 67 LPYINADIGGSD-NWSWFSTAWTLASAVSFPFVGRLSDLFGR-RYFFIIGSLLGVVGSIVCAT--AQNMNTFIAGMVLYG 142 (599)
T ss_pred HHHHHHhcCCCc-cchHHHHHHHHHHHHHHHhhHHHHHHhcc-hHHHHHHHHHHHhHHHHhhc--CCcHHHHHHHHHHHH
Confidence 345656667533 34566666777777888889999999995 77777777665555443332 245667777888999
Q ss_pred hHHHHHHHHHHHHhHhhhcCCCC
Q 020432 205 IANALMMVTGISMQNVLVGEDLS 227 (326)
Q Consensus 205 ~g~~~~~~~~~am~aD~id~~~r 227 (326)
+|.|.... ....++|.++.+.|
T Consensus 143 vgaG~~~~-~~~~isEl~p~k~R 164 (599)
T PF06609_consen 143 VGAGVQEL-AALAISELVPNKWR 164 (599)
T ss_pred HhhHHHHH-HHHHHHHhcccchh
Confidence 99766554 45568999987766
No 206
>PRK15075 citrate-proton symporter; Provisional
Probab=97.13 E-value=0.011 Score=56.91 Aligned_cols=139 Identities=9% Similarity=-0.032 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhh-h-----HHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHH
Q 020432 106 VALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALV-P-----AIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~-~-----~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~ 179 (326)
..+..++..+-.+..+.+.|... ..++.++...... . ....+...++.++.+++.+|+|| |+.+..+..++.
T Consensus 20 ~~~~~~~~~~d~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr-r~~l~~~~~~~~ 97 (434)
T PRK15075 20 VTSGNFLEMFDFFLFGFYATAIA-KTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGR-RKGLIVTLSIMA 97 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhch-HHHHHHHHHHHH
Confidence 34455566666666666666544 4455433222111 1 11122224567788899999996 666777777766
Q ss_pred HHHHHHhhcCCcch------hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 180 FCGAGILILPMNMS------AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 180 ~~~~~l~~~~~~~~------~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
++.++..+.+.... ..+++.-++.|++.+...+...+.++|..+.++| |...+......-++..++.
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~r--g~~~~~~~~~~~~g~~~g~ 170 (434)
T PRK15075 98 SGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRK--GFYTSWQSASQQVAVVFAA 170 (434)
T ss_pred HHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccc--hHHHHHHHHHHHHHHHHHH
Confidence 66655555442110 1245556678888888777778899999988777 4445665555555544433
No 207
>TIGR00898 2A0119 cation transport protein.
Probab=97.05 E-value=0.0021 Score=63.06 Aligned_cols=85 Identities=11% Similarity=0.135 Sum_probs=64.6
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhH
Q 020432 140 ALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQN 219 (326)
Q Consensus 140 ~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~a 219 (326)
+.......++.+++.++++++++|+|| |+.+..+.++..++.+...+. ++.+.+++.-.+.|++.+...+..+++++
T Consensus 130 ~~~~s~~~~g~~~g~~~~g~l~Dr~Gr-r~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~r~l~G~~~~~~~~~~~~~~~ 206 (505)
T TIGR00898 130 DLTQSCFFVGVLLGSFVFGYLSDRFGR-KKVLLLSTLVTAVSGVLTAFS--PNYTVFLVFRLLVGMGIGGIWVQAVVLNT 206 (505)
T ss_pred HHHHHHHHHHHHHHHHhHHHhhhhccc-hHHHHHHHHHHHHHHHHHHHc--ccHHHHHHHHHHHHhhccchHHHHHHHhh
Confidence 445556677889999999999999996 556677666655555444443 34566777778899999999999999999
Q ss_pred hhhcCCCC
Q 020432 220 VLVGEDLS 227 (326)
Q Consensus 220 D~id~~~r 227 (326)
|..+.++|
T Consensus 207 e~~~~~~r 214 (505)
T TIGR00898 207 EFLPKKQR 214 (505)
T ss_pred eecChhhh
Confidence 99988776
No 208
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.00 E-value=0.014 Score=56.73 Aligned_cols=126 Identities=10% Similarity=0.016 Sum_probs=96.4
Q ss_pred HHHHHHHHHHhcCCccc-chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHH
Q 020432 122 AYLAFYVINDLRMGQSA-KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLA 200 (326)
Q Consensus 122 ~~~~~Y~~~~l~~~~~~-~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~ 200 (326)
.+..-|+...+|.+++. ...+.-..+.+-.+..++.+.+++|.|- |+.+..+++.+.+...++.+. .+...+.+.-
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~-K~vL~l~~l~Wsl~t~L~~fa--~Sl~~L~i~R 122 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRY-KPVLVLQALSFVCVWLLLLLG--TSVWHMQLME 122 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc-hHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 44444777788887665 5666666777778888888899988874 566777787777766666553 3466777888
Q ss_pred HHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 201 IFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 201 ~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
++.|++.|... ...+.+...+|.++| +...|...-+..+|..+++.+.++
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER--~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRY--QRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999988 888999999998777 555788888889998888777776
No 209
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.00 E-value=0.0031 Score=60.38 Aligned_cols=146 Identities=16% Similarity=0.109 Sum_probs=98.4
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhc----CCcc-hhHHHHHHHHHhhHHHHHHHH
Q 020432 139 KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILIL----PMNM-SAFMYVLAIFVGIANALMMVT 213 (326)
Q Consensus 139 ~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~----~~~~-~~~~l~~~~~~g~g~~~~~~~ 213 (326)
.+.+..+..++.++|-++.+++..|+|| |+.|...+++++++.+..-+- ++.. ..++..--.+.|+|.|+=+++
T Consensus 86 ~~~Vn~~A~vGti~GQl~FG~lgD~~GR-K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPl 164 (538)
T KOG0252|consen 86 LALVNAAALVGTIFGQLFFGWLGDKFGR-KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPL 164 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcc-hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcc
Confidence 3556667788899999999999999996 667888777766665532221 1212 234555566789999999999
Q ss_pred HHHHhHhhhcCCCCC--ceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeee
Q 020432 214 GISMQNVLVGEDLSG--CAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFG 291 (326)
Q Consensus 214 ~~am~aD~id~~~r~--~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 291 (326)
+-++.+|-.....|. -+.+++.+.|.+-.|..++..+.+-+....++.. + ....+..+.+.+.
T Consensus 165 SAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~-~--------------~~~ld~vWRl~~g 229 (538)
T KOG0252|consen 165 SATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPS-T--------------YPHLDGVWRIIFG 229 (538)
T ss_pred hHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCC-C--------------chHHHHHHHHHHH
Confidence 988888777664443 2567888999888887667666665544333321 1 1122345888888
Q ss_pred cchHhHHHH
Q 020432 292 LGLIPAICS 300 (326)
Q Consensus 292 ~~~iP~~~~ 300 (326)
.+.+|++..
T Consensus 230 lg~vpa~~~ 238 (538)
T KOG0252|consen 230 LGAVPALLV 238 (538)
T ss_pred HHHHHHHHH
Confidence 888998544
No 210
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=96.95 E-value=0.0047 Score=61.03 Aligned_cols=103 Identities=14% Similarity=0.112 Sum_probs=79.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhH
Q 020432 140 ALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQN 219 (326)
Q Consensus 140 ~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~a 219 (326)
+.+.....++..+++++.+++++++|| |.++.++.++..++.++..+.+ +...+++.-++.|+|.|.........++
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GR-k~~l~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGR-KKTLLLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 566667788899999999999999996 6677777777666666665543 6677888889999999999988888888
Q ss_pred hhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 220 VLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 220 D~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
|+.+.+.| |...+......-+|.-++
T Consensus 169 Eiap~~~R--G~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 169 EIAPAHIR--GTLVSLYQLFITIGILLG 194 (513)
T ss_pred hcCChhhh--HHHHHHHHHHHHHHHHHH
Confidence 88888888 766666666555555444
No 211
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.90 E-value=0.0061 Score=57.47 Aligned_cols=88 Identities=16% Similarity=0.130 Sum_probs=67.8
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHH
Q 020432 138 AKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISM 217 (326)
Q Consensus 138 ~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am 217 (326)
..+++...-.+..++.+++.+++..|.|. |.-+++|.+++....+++-+. ++.+..++.-.+-|+|.+...+...+|
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy-~ipm~~Gl~vmf~sTilFafg--~sy~~l~vAR~LQgvgsA~~~tsglam 183 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGY-KIPMVAGLFVMFLSTILFAFG--NSYPMLFVARSLQGVGSAFADTSGLAM 183 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhcc-ccHHHHHHHHHHHHHHHHHHc--chhHHHHHHHHHhhhhHHHHHhhhHHH
Confidence 45666666677888899999999888884 666777777655555555443 455677777888999999999999999
Q ss_pred hHhhhcCCCCC
Q 020432 218 QNVLVGEDLSG 228 (326)
Q Consensus 218 ~aD~id~~~r~ 228 (326)
+||...+|+|+
T Consensus 184 lAd~f~~d~er 194 (464)
T KOG3764|consen 184 LADVFPEDNER 194 (464)
T ss_pred HHHHcccchhh
Confidence 99999887654
No 212
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.87 E-value=0.0082 Score=43.38 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhh
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAY 170 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~ 170 (326)
.+-..|++.+........|++.|.++ .|.++.....+..+..+..+++.++++.+++|.+|+|..
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 34456777788888888899999886 677666677777777788899999999999999875543
No 213
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=96.86 E-value=0.001 Score=63.67 Aligned_cols=78 Identities=12% Similarity=0.125 Sum_probs=50.1
Q ss_pred chhhhhHHHHHHHHHhhhheeeecCCCc-ccCC--C------CCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHH
Q 020432 53 YRWIAYSSIFIGCCFVGIFLSRTEEPRL-KMGL--R------GNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAY 123 (326)
Q Consensus 53 ~~~~~~i~~~i~~~~~~~~~~~tkE~~~-~~~~--~------~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~ 123 (326)
||+.-.+.+++++++.++.++..+|+.+ ..++ . +..+..++++.+.||+-+....+.++..+.......-+
T Consensus 187 Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww 266 (493)
T KOG1330|consen 187 WRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWW 266 (493)
T ss_pred eEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchh
Confidence 6666667778888888887788888653 1111 1 11245778899999999887676676666655554433
Q ss_pred HHHHHHH
Q 020432 124 LAFYVIN 130 (326)
Q Consensus 124 ~~~Y~~~ 130 (326)
.|.+..|
T Consensus 267 ~p~~~~~ 273 (493)
T KOG1330|consen 267 APAFIYY 273 (493)
T ss_pred hhhHHHH
Confidence 4443333
No 214
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.12 Score=50.08 Aligned_cols=154 Identities=11% Similarity=0.084 Sum_probs=92.1
Q ss_pred chhhhHHH---HhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c-ccchhhhHHHHHHHHHHHHHHHHHH-
Q 020432 89 HARISWAY---WFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMG--Q-SAKALVPAIIYICSFIVSILLQEMA- 161 (326)
Q Consensus 89 ~~~~~l~~---~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~--~-~~~~~~~~~~~i~~~i~~~~~~~l~- 161 (326)
+..+.++. +++++..+.+...++.+.+....-...+|.......... . ...++......++.+++...+..+.
T Consensus 225 ~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~ 304 (461)
T KOG3098|consen 225 SFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSK 304 (461)
T ss_pred cHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhh
Confidence 44445444 456777777777777777777777777777766653321 1 1223333344555666666666553
Q ss_pred --HhcccchhhhhHhHHHHHHHHHHHhh-cCCcc---------------hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhc
Q 020432 162 --WTGQRLKAYYSAGGVLWVFCGAGILI-LPMNM---------------SAFMYVLAIFVGIANALMMVTGISMQNVLVG 223 (326)
Q Consensus 162 --k~~gkkk~~~~~~~~l~~~~~~~l~~-~~~~~---------------~~~~l~~~~~~g~g~~~~~~~~~am~aD~id 223 (326)
|++|+ +.+...+..+..+++++... .|.+. ....++...+.|++=+..+..-..+++++..
T Consensus 305 rir~fg~-~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~ 383 (461)
T KOG3098|consen 305 RIRGFGR-KPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYP 383 (461)
T ss_pred hhhhccc-CcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 45564 45556656554444444433 23222 2356677788899999999999999999994
Q ss_pred CCCCCceEEEehhHHHHHHHhhH
Q 020432 224 EDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 224 ~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
+|.+ -.++.+.|-+.++.++
T Consensus 384 ~~~~---~~fsi~kfyq~~~s~v 403 (461)
T KOG3098|consen 384 DDRA---QAFSLFKFYQSVASCV 403 (461)
T ss_pred CchH---HHHHHHHHHHHHHHHH
Confidence 4332 2366666666555443
No 215
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.71 E-value=0.044 Score=52.54 Aligned_cols=116 Identities=13% Similarity=0.149 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHH
Q 020432 105 QVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAG 184 (326)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~ 184 (326)
++...+++.+........|++.|+++. |.++...+.+..+..+..+++.++++.+++|.+++|+...+..++..+. +
T Consensus 6 rLs~~~f~~f~~~G~~~p~~~~~L~~~-G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~--~ 82 (400)
T PF03825_consen 6 RLSLMYFLYFFAYGAFLPYLPLYLESR-GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALA--L 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHH--H
Confidence 455667777777777778888888775 4656667777777788889999999999977654455444433332222 2
Q ss_pred HhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhc
Q 020432 185 ILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVG 223 (326)
Q Consensus 185 l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id 223 (326)
+.....++.+.+++...+..+......++..++.-+.++
T Consensus 83 ~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~ 121 (400)
T PF03825_consen 83 LLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG 121 (400)
T ss_pred HHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 222222344556666666666666666666665555554
No 216
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=96.67 E-value=0.015 Score=55.30 Aligned_cols=107 Identities=14% Similarity=0.102 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhcC---Cc-ccchhhhHHHHHHHHHHHHHHHHH---HHhcccchhhhhHhHHHHHHHHHHHhhcCC-c
Q 020432 120 SQAYLAFYVINDLRM---GQ-SAKALVPAIIYICSFIVSILLQEM---AWTGQRLKAYYSAGGVLWVFCGAGILILPM-N 191 (326)
Q Consensus 120 ~~~~~~~Y~~~~l~~---~~-~~~~~~~~~~~i~~~i~~~~~~~l---~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~-~ 191 (326)
...++|-|++.+.+. ++ +..+.......++.++-..+.|-+ +.+.|.||+.+.....+..+....+++.++ +
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s 113 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGS 113 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCc
Confidence 357888899888875 21 223444455566666655555544 555555555444444455556667777776 4
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC
Q 020432 192 MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL 226 (326)
Q Consensus 192 ~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~ 226 (326)
+....++...+..++....++...||++|..++++
T Consensus 114 ~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 114 YLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred hHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 45566666777788999999999999999998754
No 217
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.60 E-value=0.029 Score=54.80 Aligned_cols=101 Identities=15% Similarity=0.043 Sum_probs=69.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhc-CCcchhHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 140 ALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILIL-PMNMSAFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 140 ~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~-~~~~~~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
+.+..+..+++++|++..+++++++||| ..+.+..++...+.+.+.+- ..+....+.+.-.+.|+..+.......-.+
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK-~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRK-NALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcch-HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3444467788999999999999999974 66666666655555544432 223445666677788888888877777788
Q ss_pred HhhhcCCCCCceEEEehhHHHHHHH
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLDKMS 243 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~Kl~ 243 (326)
.|+.+.+-| |.......+..-+|
T Consensus 142 ~E~sP~~~R--G~~g~~~~~~~~~g 164 (485)
T KOG0569|consen 142 TEISPKNLR--GALGTLLQIGVVIG 164 (485)
T ss_pred hhcChhhhc--cHHHHHHHHHHHHH
Confidence 899999888 76444444443333
No 218
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.56 E-value=0.4 Score=47.13 Aligned_cols=79 Identities=10% Similarity=0.032 Sum_probs=51.5
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cchhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~---~~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
|.++++.++.++|+|..+.+++..++..+..+......-...+....++.+ +++-+.....+.+++.+++.+.+.||
T Consensus 266 k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~ 345 (491)
T PF03219_consen 266 KMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRR 345 (491)
T ss_pred CccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999999888888888888887766555555544333322 22223333344455555667777777
Q ss_pred cc
Q 020432 164 GQ 165 (326)
Q Consensus 164 ~g 165 (326)
+|
T Consensus 346 ~G 347 (491)
T PF03219_consen 346 FG 347 (491)
T ss_pred hh
Confidence 66
No 219
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.44 E-value=0.01 Score=57.94 Aligned_cols=152 Identities=7% Similarity=-0.083 Sum_probs=103.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhH
Q 020432 140 ALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQN 219 (326)
Q Consensus 140 ~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~a 219 (326)
+.+......+.+++.....++.+|+|- |+.+..+.++.++..++.-+....+.+.+++.-++-|++.|...+...++.+
T Consensus 76 ~~i~ss~~~G~i~~~iP~g~l~~k~G~-r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~ 154 (466)
T KOG2532|consen 76 GLIFSSFFWGYILGQIPGGYLADKFGA-RRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILA 154 (466)
T ss_pred HHHHHHHHHHHHHHHcCcHHHHHHcCc-hHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceee
Confidence 455666777888888888899888875 5566666666555444443333333346677788899999999888888888
Q ss_pred hhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHH
Q 020432 220 VLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAIC 299 (326)
Q Consensus 220 D~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~ 299 (326)
.-.+.+|| +...+..+-...+|..++..+.|.+-+. . .|.+..+-..-.+.
T Consensus 155 ~W~P~~Er--s~~~ail~~g~q~g~v~~mp~sg~lc~s---------------------~------~GW~sifY~~g~~g 205 (466)
T KOG2532|consen 155 KWAPPNER--STFIAILTAGSQLGTIITMPVSGLLCES---------------------S------LGWPSIFYVFGIVG 205 (466)
T ss_pred eECCHHHH--HHHHHHHHHHHHHHHHHHHHhHHHHhcc---------------------C------CCCchHHHHHHHHH
Confidence 88887777 5556677777777777776666654211 1 45566665555556
Q ss_pred HHHHHHHHhhccCCCCCCcccc
Q 020432 300 SLVSVAVTFTMKLHTPYSKPLV 321 (326)
Q Consensus 300 ~l~~~i~~~~y~l~~~~~~~i~ 321 (326)
.+..++..++|.-++++|+.|-
T Consensus 206 ~i~~~~w~~~~~d~P~~h~~is 227 (466)
T KOG2532|consen 206 LIWFILWFLFYSDSPSKHPNIS 227 (466)
T ss_pred HHHHHHHHHHhcCCcccCCCCC
Confidence 6666666677887777777653
No 220
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.40 E-value=4.4e-06 Score=80.62 Aligned_cols=95 Identities=12% Similarity=-0.015 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHh----hcCCcc---hhHHHHHHHHHhhHHH-HHHHHHHHHhHh
Q 020432 149 CSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGIL----ILPMNM---SAFMYVLAIFVGIANA-LMMVTGISMQNV 220 (326)
Q Consensus 149 ~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~----~~~~~~---~~~~l~~~~~~g~g~~-~~~~~~~am~aD 220 (326)
..+++.++...+.+|.|| |+.++.+..+.+++...+. ....++ ....++...+...+.+ +...++|.+.+|
T Consensus 298 ~~~~~~~~~~~~~~~~GR-r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~E 376 (451)
T PF00083_consen 298 VNFLGTLLAIFLIDRFGR-RKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAE 376 (451)
T ss_pred cccccccccccccccccc-ccccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccc
Confidence 344445555567888886 5566666655444443332 122221 1111111111112222 345688889999
Q ss_pred hhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 221 LVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 221 ~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
..+.+.|..| .+......+++..+
T Consensus 377 lfPt~~R~~~--~~~~~~~~~i~~~i 400 (451)
T PF00083_consen 377 LFPTKVRSTG--IGLSYAVGRIGGFI 400 (451)
T ss_pred cccccccccc--cccccccccccccc
Confidence 9998888554 34444444444333
No 221
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.042 Score=51.95 Aligned_cols=140 Identities=11% Similarity=0.019 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC
Q 020432 111 MLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM 190 (326)
Q Consensus 111 ~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~ 190 (326)
++.+...+..+--+..-++.+.+.+....+.+-...+.+-.+.+...+.+.||.|. |+..+.|+.+.++++.+++-.+.
T Consensus 22 Ffl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gy-k~gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 22 FFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGY-KAGIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred HHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhh-HHHHHHHHHHHHHHHHHHhhhhh
Confidence 33444444445555566677778765555666667777788888889999999995 66688888887777766664433
Q ss_pred cc-hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 191 NM-SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 191 ~~-~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
.. ....++...+.|.|.+...+.....+.+.-|+++.++ -.....-..++|..++..+.++
T Consensus 101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~--rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 101 SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAF--RLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHH--HHHHHHHhhhhHHHHHHHHHHH
Confidence 32 3455566678888988888877778887777632111 1233444455665555555443
No 222
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=96.22 E-value=1.2 Score=42.66 Aligned_cols=156 Identities=11% Similarity=-0.019 Sum_probs=87.3
Q ss_pred hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccch
Q 020432 91 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDL--RMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLK 168 (326)
Q Consensus 91 ~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l--~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk 168 (326)
.++++...+||..+.-.+.+.+...+......|.-.-..+.. +....+.+.+-....+.+.++++..+++.++..+..
T Consensus 237 ~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~ 316 (412)
T PF01770_consen 237 WKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG 316 (412)
T ss_pred HHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHH
Confidence 456777889999888777788888877777655544444441 111123344444455555666677777743433212
Q ss_pred hhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 169 AYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 169 ~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
. ..++..-...++.++.....++.+..++.-++.+.......++..+=+|--.+ +++-|++|++|+|.--+-+.+-.
T Consensus 317 ~-l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~--~e~yaLVFGiNtf~Al~LQtilT 393 (412)
T PF01770_consen 317 E-LALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLS--EERYALVFGINTFVALVLQTILT 393 (412)
T ss_pred H-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccceeeeeeeHHHHHHHHHHheE
Confidence 2 22222221222222222223466777777666666655555555554444444 34459999999998776665544
Q ss_pred H
Q 020432 249 Y 249 (326)
Q Consensus 249 ~ 249 (326)
.
T Consensus 394 ~ 394 (412)
T PF01770_consen 394 L 394 (412)
T ss_pred E
Confidence 3
No 223
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.06 E-value=0.041 Score=49.07 Aligned_cols=95 Identities=13% Similarity=0.098 Sum_probs=50.9
Q ss_pred cchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhh-eeeecC-CCccc--CCC
Q 020432 10 TSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIF-LSRTEE-PRLKM--GLR 85 (326)
Q Consensus 10 ~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~-~~~tkE-~~~~~--~~~ 85 (326)
++|..++.+-..+-.+|.+++.+ +.++... ......+-|++...+.+++..+..++. .+++|= ...++ +++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~i--pF~~~~~---~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k 76 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNI--PFLISSS---VVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEK 76 (267)
T ss_pred CccceeeeeccccchhhHHHHHh--hHHhcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCccccccc
Confidence 57788888888888888877544 3333210 001112347777666666554433332 334441 11111 111
Q ss_pred CC--cchhhhHHHHhhchhHHHHHHH
Q 020432 86 GN--SHARISWAYWFKKILYYQVALV 109 (326)
Q Consensus 86 ~~--~~~~~~l~~~~~N~~~~~~~~~ 109 (326)
++ ....+...+.+|+|.-+...+.
T Consensus 77 ~~~~~~~~~s~~~~LK~K~tw~w~~~ 102 (267)
T PF07672_consen 77 ENSTLSKKPSYKSILKEKETWKWILI 102 (267)
T ss_pred ccccccccchHHHHHccchHHHHHHH
Confidence 11 1234678999999998765543
No 224
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=95.91 E-value=0.87 Score=44.61 Aligned_cols=79 Identities=8% Similarity=-0.005 Sum_probs=45.9
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc---cchhhhHHHHHHHHHHHHHHHHHHHh
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQS---AKALVPAIIYICSFIVSILLQEMAWT 163 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~---~~~~~~~~~~i~~~i~~~~~~~l~k~ 163 (326)
|.+..+.++.++|+|.++.+.+..++.....+....-.--.++...-++.+ .++.+.....+.+++..++.+++.||
T Consensus 250 k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~ 329 (472)
T TIGR00769 250 KMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRK 329 (472)
T ss_pred CCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445788999999999998887776666666665543333333322211111 22333333344455555555777777
Q ss_pred cc
Q 020432 164 GQ 165 (326)
Q Consensus 164 ~g 165 (326)
+|
T Consensus 330 ~G 331 (472)
T TIGR00769 330 YG 331 (472)
T ss_pred hh
Confidence 76
No 225
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.88 E-value=0.13 Score=52.39 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=56.8
Q ss_pred hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHH-HHHHHHHHHHHHHHHHHhc
Q 020432 90 ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI-IYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~-~~i~~~i~~~~~~~l~k~~ 164 (326)
+.+.++.+++||-|...++...+.........++.|+|+....+.+++....+... ...+..+|.++.+.+.||+
T Consensus 381 fp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkf 456 (735)
T KOG3626|consen 381 FPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKF 456 (735)
T ss_pred HHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeee
Confidence 45578889999999999999999999999999999999999999876544444332 2233455566677776665
No 226
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=95.76 E-value=0.032 Score=55.10 Aligned_cols=85 Identities=12% Similarity=0.191 Sum_probs=67.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHh
Q 020432 141 LVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNV 220 (326)
Q Consensus 141 ~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD 220 (326)
....+.+++.++|++++++++.++|| |..+..++++..++.....+. .+.+..++.-++.|++.++.....+...+|
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GR-k~~~~~~~~~~~i~~~~~a~a--~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E 198 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGR-KPVLLVSLLLFIIFGILTAFA--PNYWMFLIFRFLSGFFGSGPLTVGFGLVAE 198 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhccc-HHHHHHHHHHHHHHHHHHHHh--CcHHHHHHHHHHHHhhccchhHHhHhhhee
Confidence 33446677889999999999988995 777888887766666444443 356778888889999999999999999999
Q ss_pred hhcCCCCC
Q 020432 221 LVGEDLSG 228 (326)
Q Consensus 221 ~id~~~r~ 228 (326)
.++.+.|.
T Consensus 199 ~~~~~~R~ 206 (521)
T KOG0255|consen 199 IVSPKQRG 206 (521)
T ss_pred ecCcchhh
Confidence 99998884
No 227
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=95.73 E-value=0.00027 Score=68.12 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=70.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCc-chhHHHHHHHHHhhHHHHHHHHHHHHh
Q 020432 140 ALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMN-MSAFMYVLAIFVGIANALMMVTGISMQ 218 (326)
Q Consensus 140 ~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~-~~~~~l~~~~~~g~g~~~~~~~~~am~ 218 (326)
........++.++|+++.+.+++|+|| |+.+..+..+..++.++..+.+.. +...+.+.-.+.|+|.|.........+
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GR-k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~ 127 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGR-KPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYI 127 (451)
T ss_pred HHHHHHHHhhhcccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344456677889999999999999996 566777776655555555544322 456666777889999999999999999
Q ss_pred HhhhcCCCCCceEEEehhHHHH
Q 020432 219 NVLVGEDLSGCAFVCGTLSFLD 240 (326)
Q Consensus 219 aD~id~~~r~~g~i~s~~sf~~ 240 (326)
.|..+.+.| |...+......
T Consensus 128 ~E~~~~~~R--~~~~~~~~~~~ 147 (451)
T PF00083_consen 128 SEIAPPKHR--GFLSSLFQLFW 147 (451)
T ss_pred ccccccccc--ccccccccccc
Confidence 999988777 55555544433
No 228
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=95.61 E-value=0.2 Score=49.30 Aligned_cols=151 Identities=10% Similarity=0.057 Sum_probs=100.3
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHH
Q 020432 138 AKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISM 217 (326)
Q Consensus 138 ~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am 217 (326)
.+...-.+.+++-+++.++...+.+|++- .+.+....+.|.+...+-.. ..+.+.+.++-++.|+..++.++..-..
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~l-s~~l~~~~~~w~~~~~~~~~--~~s~~~~ialr~llGl~es~~wP~~~~~ 158 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPL-SKGLSVSGILWGLFGFLTAA--VHSFPGLIALRFLLGLFESGGWPGVVAI 158 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCCh-HHHHHHHHHHHHHHHHHHHH--HhhhHHHHHHHHHHHHHhcccchHHHHH
Confidence 45566667778888999999999888862 22223323333332222222 2456778888899999999888888777
Q ss_pred hHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhH
Q 020432 218 QNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPA 297 (326)
Q Consensus 218 ~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~ 297 (326)
++..-++++| |...|.+.-..-+|..+|+.+...+...-+ +. . +.+-|+.+.+-=+
T Consensus 159 lg~wy~~~e~--g~r~~~~~a~~~~g~i~ggliA~g~~~~~~---~~--------------~-----~~gW~~~FiI~G~ 214 (495)
T KOG2533|consen 159 LGNWYGKSER--GLRMGIWYASASLGNIFGGLIAYGVFKLNG---SG--------------G-----LAGWRWLFIIEGV 214 (495)
T ss_pred HHhhcChhhh--hhhHHHHHHhcchhhHHHHHHHHHhhhhcC---CC--------------C-----cCCceeehhHHHH
Confidence 7777777676 888999998888888888887765432111 11 2 4788888844444
Q ss_pred HHHHHHHHHHhhccCCCC
Q 020432 298 ICSLVSVAVTFTMKLHTP 315 (326)
Q Consensus 298 ~~~l~~~i~~~~y~l~~~ 315 (326)
+..+.+++++++.|-+++
T Consensus 215 i~~~~gi~~f~~lp~~P~ 232 (495)
T KOG2533|consen 215 ITLVLGIVVFFFLPDNPS 232 (495)
T ss_pred HHHHHHheEEEEecCChh
Confidence 455556666677777665
No 229
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=95.59 E-value=0.59 Score=38.58 Aligned_cols=101 Identities=14% Similarity=0.081 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC
Q 020432 146 IYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGED 225 (326)
Q Consensus 146 ~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~ 225 (326)
......+..++.|.+.++.|- |+.+++|.+..++. ..-++.| +.+.++...++.|+|.+..+...-..+.+..+++
T Consensus 46 ~Y~~~~~s~l~~P~iv~~lg~-K~sm~lg~~~y~~y-~~~~~~~--~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~ 121 (156)
T PF05978_consen 46 LYGSFAISCLFAPSIVNKLGP-KWSMILGSLGYAIY-IASFFYP--NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEE 121 (156)
T ss_pred HHHHHHHHHHhHHHHHHHHhh-HHHHHHHHHHHHHH-HHHHHhh--hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHH
Confidence 344456666778888888885 66777777654432 2223333 3466777888999999988877666677666654
Q ss_pred CCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 226 LSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 226 ~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
.+ +-..+.+.-..+.++-+|+.+.-
T Consensus 122 ~~--~~~~~ifw~i~~~s~i~G~~~~~ 146 (156)
T PF05978_consen 122 TI--GRNTGIFWAIFQSSLIFGNLFLF 146 (156)
T ss_pred HH--hhHHHHHHHHHHHHHHHHHHHHH
Confidence 33 22345555555666555554443
No 230
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.58 E-value=0.22 Score=48.21 Aligned_cols=133 Identities=14% Similarity=0.079 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHH---hcc-cchhhhhHhHHHHHHHHHHHhhcCC--cch
Q 020432 120 SQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAW---TGQ-RLKAYYSAGGVLWVFCGAGILILPM--NMS 193 (326)
Q Consensus 120 ~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k---~~g-kkk~~~~~~~~l~~~~~~~l~~~~~--~~~ 193 (326)
......+|+++++|.++.....+.....+.+.+ -++++.++. .+| |||..++++.++.......+..++. .+.
T Consensus 8 ~~~~~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~ 86 (433)
T PF03092_consen 8 SRLAIYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSA 86 (433)
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchh
Confidence 345567788899998765444433333333222 234444432 223 3454445555554334444445553 233
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 194 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 194 ~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
....+...+..+|....-++.-+++.|....+.+++|=.=|.....+.+|.-++..+.|.
T Consensus 87 ~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~ 146 (433)
T PF03092_consen 87 AIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGP 146 (433)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 444445566678888888888888888886544432322333333444444444334343
No 231
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=95.27 E-value=2.6 Score=39.50 Aligned_cols=153 Identities=10% Similarity=0.001 Sum_probs=84.5
Q ss_pred hhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccchhhhHHHHHHHHHHHHHHHHHH-H--hccc
Q 020432 91 RISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ-SAKALVPAIIYICSFIVSILLQEMA-W--TGQR 166 (326)
Q Consensus 91 ~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~-~~~~~~~~~~~i~~~i~~~~~~~l~-k--~~gk 166 (326)
.++++...+||+.+.-.+.+.+..++..-+..|--.--++....+. -+.+..=.+....+.+++++.+.+. + |.|
T Consensus 224 ~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g- 302 (433)
T KOG3810|consen 224 WRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNRWG- 302 (433)
T ss_pred HHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHHHHHHHHHHheeeccchhh-
Confidence 3356667789998766666666666655554333333333321111 1222333344555667777777763 2 222
Q ss_pred chhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH
Q 020432 167 LKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI 246 (326)
Q Consensus 167 kk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i 246 (326)
+.+...+ -...++++++.....+.+..++.-++...-.....++..+-+|...|. |.-|++||+++|.--+-+.+
T Consensus 303 -~~ll~~~--s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~--e~~gLvFGiNTFvAl~lQsi 377 (433)
T KOG3810|consen 303 -DLLLAVG--SAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSS--ELFGLVFGINTFVALILQSI 377 (433)
T ss_pred -HHHHHHH--HHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhh--hhheeeeehHHHHHHHHHHh
Confidence 2222332 223344555544445667777777777666555555555555555554 44599999999986666555
Q ss_pred HHH
Q 020432 247 AVY 249 (326)
Q Consensus 247 ~~~ 249 (326)
-..
T Consensus 378 lT~ 380 (433)
T KOG3810|consen 378 LTL 380 (433)
T ss_pred heE
Confidence 433
No 232
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=95.22 E-value=0.54 Score=44.47 Aligned_cols=65 Identities=14% Similarity=0.105 Sum_probs=41.7
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCC
Q 020432 193 SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSP 259 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~ 259 (326)
+..++....+..+..+..-+....++....+.+.| |.+.++..=..-++-++|..+-|....++.
T Consensus 352 ~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qr--G~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~ 416 (451)
T KOG2615|consen 352 PVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQR--GTLNGIFRSLGALARAIGPLVSGVIFSWSQ 416 (451)
T ss_pred chhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccc--hHHHHHHHHHHHHHHHhhhhhhheeEEEec
Confidence 35566666777777777777787788777777777 554544443444445667666666555554
No 233
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=95.19 E-value=0.12 Score=52.64 Aligned_cols=133 Identities=9% Similarity=0.018 Sum_probs=71.5
Q ss_pred HHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHH-HhcccchhhhhHhHHHHHHHHHHHhhcC--Cc----c
Q 020432 120 SQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMA-WTGQRLKAYYSAGGVLWVFCGAGILILP--MN----M 192 (326)
Q Consensus 120 ~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~-k~~gkkk~~~~~~~~l~~~~~~~l~~~~--~~----~ 192 (326)
+.+.+..|+++.+|.++.....+........-+...+.+.++ +++|| +++...+.++..++..++.+-+ +. .
T Consensus 6 m~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~-~~tIl~~~ii~~lG~~llai~a~~~~~~~~~ 84 (654)
T TIGR00926 6 MRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGK-FKTILYLSIVYVVGHALLSFGAIPSSGHPLH 84 (654)
T ss_pred cHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHhccCcccccchH
Confidence 445566777777777543222222222222222233344555 56775 5556666666555554444321 11 1
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCC--CCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 193 SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDL--SGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~--r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
....++...+...|.|++-+..-++.+|--|++. +.+.+ |+++-+..-+|.-++..+..+.
T Consensus 85 ~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~-F~~fY~~iNiGSlis~~i~~~l 147 (654)
T TIGR00926 85 DLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRF-FSFFYFAINAGSLISTIITPIL 147 (654)
T ss_pred HHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 1234455666778888888888888888876533 22332 5566666666654555555544
No 234
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=95.12 E-value=0.63 Score=45.92 Aligned_cols=136 Identities=13% Similarity=0.042 Sum_probs=80.8
Q ss_pred hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchh
Q 020432 90 ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKA 169 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~ 169 (326)
.+.+...++.|.+.....+..++.-.......+++.-+.++..+- +............+-+..-++..++.||.|. -+
T Consensus 360 v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~-~~LfGv~~a~~~~gEI~~~ffs~klI~kiGH-v~ 437 (618)
T KOG3762|consen 360 VLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGI-KTLFGVVSALCHAGEILFYFFSFKLIEKIGH-VN 437 (618)
T ss_pred HHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCc-ceeeeehhhhhccchHHHHHHHHHHHHHhcc-cc
Confidence 444555677787766544444444445455555554444444322 2223333333344455555666788888884 55
Q ss_pred hhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCc
Q 020432 170 YYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGC 229 (326)
Q Consensus 170 ~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~ 229 (326)
++..++.... ...++.---.|+|.++.+-++-|+..+..+...-+-+.++.+.+.|+.
T Consensus 438 v~~lgLa~~~--~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at 495 (618)
T KOG3762|consen 438 VMYLGLACNV--GRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRAT 495 (618)
T ss_pred eeeehhhHHH--HHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHH
Confidence 5555554332 222222112567888889999999988888888888889988877643
No 235
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=95.00 E-value=0.48 Score=46.79 Aligned_cols=80 Identities=9% Similarity=0.010 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhc---CCc-------chhHHHHHHH-HHhhHHHHHHHHHH
Q 020432 147 YICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILIL---PMN-------MSAFMYVLAI-FVGIANALMMVTGI 215 (326)
Q Consensus 147 ~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~---~~~-------~~~~~l~~~~-~~g~g~~~~~~~~~ 215 (326)
.+..+++..+...+.+|.|| |...+.+...+.++..++... ... ..+..++..+ .......+..+++|
T Consensus 339 ~~v~~~~t~~~~~lvd~~gR-r~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w 417 (513)
T KOG0254|consen 339 GVVNFLGTLVATYLVDRFGR-RKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPW 417 (513)
T ss_pred HHHHHHHHHHHHHHHHHhcc-HHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchh
Confidence 33445555555677777785 667777776666555444322 111 1112222211 12222223346899
Q ss_pred HHhHhhhcCCCC
Q 020432 216 SMQNVLVGEDLS 227 (326)
Q Consensus 216 am~aD~id~~~r 227 (326)
.+.++..+-+.|
T Consensus 418 ~~~sEifp~~~r 429 (513)
T KOG0254|consen 418 VIVSEIFPLRLR 429 (513)
T ss_pred hhhhccCcHhHH
Confidence 888888888777
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=94.90 E-value=0.64 Score=43.66 Aligned_cols=115 Identities=14% Similarity=0.101 Sum_probs=68.0
Q ss_pred HHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHH
Q 020432 128 VINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIAN 207 (326)
Q Consensus 128 ~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~ 207 (326)
+++..|.+....+.+...-.++--+.+++.++++||+|- ++....++++.+++ ..+=-. .+...++..+.+.|.|.
T Consensus 38 Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~-er~l~~~Llli~~G-~~iR~~--~~~~~L~~gt~l~G~gI 113 (395)
T COG2807 38 IRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGE-ERSLFLALLLIAAG-ILIRSL--GGLPLLFLGTLLAGAGI 113 (395)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhh-HHHHHHHHHHHHHH-HHHHhc--ccHHHHHHHHHHHHhhH
Confidence 444555543333333333334445567888999999985 45556656543333 222222 24567777888888888
Q ss_pred HHHHHHHHHHhHhhhcCC-CCCceEEEehhHHHHHHHhhHHHHh
Q 020432 208 ALMMVTGISMQNVLVGED-LSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 208 ~~~~~~~~am~aD~id~~-~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
+..+. ++|..|.+| .|+-|...+.++..--++.+++..+
T Consensus 114 av~nV----LLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~l 153 (395)
T COG2807 114 AVINV----LLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAAL 153 (395)
T ss_pred HHHHH----hhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhh
Confidence 76554 556667432 3444667888888887777666443
No 237
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=94.64 E-value=3.7 Score=40.40 Aligned_cols=91 Identities=11% Similarity=-0.040 Sum_probs=48.8
Q ss_pred HHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcch-hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehh
Q 020432 158 QEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS-AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTL 236 (326)
Q Consensus 158 ~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~-~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~ 236 (326)
.....+.|| |.....+..+..++.+...+.+.... ....+...+...+.+....+.+...++..+...|..| .+..
T Consensus 371 ~~~~~~~gR-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~--~~~~ 447 (521)
T KOG0255|consen 371 GLLLPEFGR-RPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTA--VGAI 447 (521)
T ss_pred HHHHHHhCc-HHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHH--HHHH
Confidence 344556664 66566666665556555555554333 1333333444445555544445555666665556333 4566
Q ss_pred HHHHHHHhhHHHHhh
Q 020432 237 SFLDKMSCGIAVYVL 251 (326)
Q Consensus 237 sf~~Kl~~~i~~~i~ 251 (326)
+....++..++..+.
T Consensus 448 ~~~~~~~~i~ap~~~ 462 (521)
T KOG0255|consen 448 SAAARLGSILAPLFP 462 (521)
T ss_pred HHHHHHHHHHHHHHH
Confidence 666666666655554
No 238
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=94.56 E-value=0.32 Score=45.94 Aligned_cols=136 Identities=10% Similarity=-0.034 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC
Q 020432 145 IIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 224 (326)
Q Consensus 145 ~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~ 224 (326)
..+.+.+.|.++...+..|+|| |+++....++..+..+.++.....+. ..+..+..-.+.++.....+.-.||+-+.
T Consensus 389 itslaefPGlLIt~~iverlGR-KkTMal~l~~f~iflfll~~c~~rn~--~tvllf~arafisg~fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGR-KKTMALSLILFGIFLFLLTTCKTRNA--YTVLLFTARAFISGAFQVAYVYTPEVYPT 465 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcc-hhHHHHHHHHHHHHHHHHHHhcCcch--hHHHHHHHHHHHhchheEEEEecCcccch
Confidence 4466778888888888888996 55667767666666555555543333 22233333345555555667777888887
Q ss_pred CCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHH
Q 020432 225 DLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSV 304 (326)
Q Consensus 225 ~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~ 304 (326)
..|..|. +.-+=..++|. +-..+++...+.+. .+-..+-..+++++.
T Consensus 466 avRatgv--GtcSsmaRIgg-I~~p~iA~~~e~s~------------------------------sl~i~vy~~~~ilag 512 (528)
T KOG0253|consen 466 AVRATGV--GTCSSMARIGG-IFSPVIAMRAELST------------------------------SLPIFVYGALFILAG 512 (528)
T ss_pred hhhhcch--hhhhhHHhhhh-hhhhHHHHHhccce------------------------------eehHHHHHHHHHHHH
Confidence 7786554 33333333332 22222222211110 111245566788888
Q ss_pred HHHhhccCCCCC
Q 020432 305 AVTFTMKLHTPY 316 (326)
Q Consensus 305 i~~~~y~l~~~~ 316 (326)
++..+.|++.|-
T Consensus 513 IavcffPiEtkG 524 (528)
T KOG0253|consen 513 IAVCFFPIETKG 524 (528)
T ss_pred HHheeeeeccCC
Confidence 888999998764
No 239
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=94.35 E-value=0.2 Score=47.30 Aligned_cols=104 Identities=13% Similarity=-0.021 Sum_probs=65.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHH-HHHHhhHHHHHHHHHHHHhHhh
Q 020432 143 PAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVL-AIFVGIANALMMVTGISMQNVL 221 (326)
Q Consensus 143 ~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~-~~~~g~g~~~~~~~~~am~aD~ 221 (326)
.-..+++.++.++.|+.++.+.|| |....+++...++..+++.. . ++. ..++. -++.|+..+ .....-|+++|+
T Consensus 74 GSsF~ilQ~~sS~~~G~~SD~yGR-kpvll~c~~~va~s~ll~~~-S-~~F-~afv~aR~l~Gi~kg-nl~v~rAiisdV 148 (451)
T KOG2615|consen 74 GSSFSILQFISSPLWGCLSDRYGR-KPVLLACLIGVALSYLLWAL-S-RNF-AAFVLARFLGGIFKG-NLSVIRAIISDV 148 (451)
T ss_pred hhHHHHHHHHhhhhhhhhhhhhCc-hHHHHHHHHHHHHHHHHHHH-H-HHH-HHHHHHHHhhhhccC-chHHHHHHHHhh
Confidence 335567889999999999999995 66655555443333333332 2 333 33433 445555443 345667899999
Q ss_pred hcCCCCCceEEEehhHHHHHHHhhHHHHhhhh
Q 020432 222 VGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQS 253 (326)
Q Consensus 222 id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~ 253 (326)
+.+..| +.-.|..+...-+|.-+|.++-|+
T Consensus 149 ~sek~r--~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 149 VSEKYR--PLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred cChhhc--cceeeeeehhhhcchhhcchhhhH
Confidence 988666 455677777777776666555554
No 240
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=94.24 E-value=2.1 Score=40.15 Aligned_cols=99 Identities=18% Similarity=0.165 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhh
Q 020432 108 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILI 187 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~ 187 (326)
..|.+...+--.-+.|....++ ..|.+.+.+..+......++++..++.+.++.|+||||.+... +++..++++...
T Consensus 41 ~vY~La~~aDWLQGpY~Y~LY~-~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~-cily~~scl~k~- 117 (354)
T PF05631_consen 41 LVYLLAMAADWLQGPYLYALYE-SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLF-CILYSLSCLTKH- 117 (354)
T ss_pred HHHHHHHHHHHhhcchhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH-HHHHHHHHHHHh-
Confidence 3455555544444444433333 3455556677777777888888888888999999975554333 444444443222
Q ss_pred cCCcchhHHHHHHHHHhhHHHHHH
Q 020432 188 LPMNMSAFMYVLAIFVGIANALMM 211 (326)
Q Consensus 188 ~~~~~~~~~l~~~~~~g~g~~~~~ 211 (326)
.++.+.+++.-++.|++.+...
T Consensus 118 --~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 118 --SSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred --ccccHHHHHHHHHHHHHHHHHH
Confidence 2345666666777888766543
No 241
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=93.99 E-value=2.2 Score=38.12 Aligned_cols=118 Identities=14% Similarity=0.023 Sum_probs=64.9
Q ss_pred HHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCC-----cchhHHHHHHH
Q 020432 127 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPM-----NMSAFMYVLAI 201 (326)
Q Consensus 127 Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~-----~~~~~~l~~~~ 201 (326)
-++..+|.+++....+.....++.-+ .++.+.+..+.|- +.+..+|.+....++..++.... .+.+.+.+...
T Consensus 27 ~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp-~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~ 104 (250)
T PF06813_consen 27 QLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGP-WVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLF 104 (250)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHH
Confidence 56778888877777776666666654 4667788877773 66677777776666665554321 12233333334
Q ss_pred HHhhHHHHHHHHHHHHhHhhhcC-CCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 202 FVGIANALMMVTGISMQNVLVGE-DLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 202 ~~g~g~~~~~~~~~am~aD~id~-~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
+.|.+.+..++. ++..-+-.. +.| |.+-+. .|--.|+++++...+
T Consensus 105 l~~~s~~~~~ta--~lvt~~~NFP~~R--G~vvgi----lk~~~GLSaai~t~i 150 (250)
T PF06813_consen 105 LGGNSSCWFNTA--SLVTCVRNFPRSR--GTVVGI----LKGFFGLSAAIFTQI 150 (250)
T ss_pred HHcccHHHhhhH--HHHHHHHhCcccc--Cceehh----hhHHHHhHHHHHHHH
Confidence 444443222221 222222222 233 655543 566677777766543
No 242
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=93.87 E-value=0.42 Score=46.73 Aligned_cols=90 Identities=16% Similarity=0.065 Sum_probs=55.7
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHhccc-chhhhhHhHHHHHHHHHHHhhc---CCcchhHHHHHHHHHhhHHHHHH
Q 020432 136 QSAKALVPAIIYICSFIVSILLQEMAWTGQR-LKAYYSAGGVLWVFCGAGILIL---PMNMSAFMYVLAIFVGIANALMM 211 (326)
Q Consensus 136 ~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gk-kk~~~~~~~~l~~~~~~~l~~~---~~~~~~~~l~~~~~~g~g~~~~~ 211 (326)
+...+++.....++..++++..+.-.+|.++ ||. ++.|.++.+++.++...+ |.+..+.+++.-++.|+|.|...
T Consensus 70 ~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~P-li~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~a 148 (488)
T KOG2325|consen 70 ATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKP-LIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVGNFA 148 (488)
T ss_pred cchhhHHHHHHHHHHHhcchhhcccccccCCcccC-HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcccHH
Confidence 3455566566677778888877776655553 344 677777766555443232 43355778888888899876443
Q ss_pred HHHHHHhHhh--hcCCCC
Q 020432 212 VTGISMQNVL--VGEDLS 227 (326)
Q Consensus 212 ~~~~am~aD~--id~~~r 227 (326)
..=+-++|. ++++.|
T Consensus 149 -~lR~Y~a~~s~~~dR~r 165 (488)
T KOG2325|consen 149 -VLRAYIADASTVEDRPR 165 (488)
T ss_pred -HHHHHHHhccCccchHH
Confidence 344567774 444444
No 243
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=93.87 E-value=0.017 Score=57.60 Aligned_cols=75 Identities=11% Similarity=0.086 Sum_probs=0.0
Q ss_pred hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHH-HHHHHHHHHHHHHHHHHhc
Q 020432 90 ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAI-IYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~-~~i~~~i~~~~~~~l~k~~ 164 (326)
+.+.++.+++||.|....+...+.........++.|+|++...+.+++..+.+... ...+..+|.++.+.+.||+
T Consensus 294 f~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~ 369 (539)
T PF03137_consen 294 FPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKF 369 (539)
T ss_dssp ----------------------------------------------------------------------------
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEe
Confidence 45578889999999998888888888889999999999999999876544444332 3335566677777776665
No 244
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=92.94 E-value=0.56 Score=44.68 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhh
Q 020432 108 LVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILI 187 (326)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~ 187 (326)
+.+..++......+...+.. +..+++++.+...+...-.+.+.+.=++.+++..|+|.|| .+..+.++..+..+.+.+
T Consensus 21 ~af~v~F~VW~l~s~l~~~i-~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~-~~~~s~~l~~IP~~~~~~ 98 (417)
T COG2223 21 LAFDVGFMVWTLFSPLGVFI-KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRK-WTILSMLLLLIPCLGLAF 98 (417)
T ss_pred HHHHHHHHHHHHHHHHHhhh-ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchH-HHHHHHHHHHHHHHHHHH
Confidence 33444444444444444433 3666776554443332222233333344556777777544 567777666666655544
Q ss_pred c-CCcchhHHHHHHHHHhhHHHHH
Q 020432 188 L-PMNMSAFMYVLAIFVGIANALM 210 (326)
Q Consensus 188 ~-~~~~~~~~l~~~~~~g~g~~~~ 210 (326)
. ...+.+.+++...+.|++.+.+
T Consensus 99 a~~~~~~~~ll~~gll~G~~GasF 122 (417)
T COG2223 99 AVTYPSTWQLLVIGLLLGLAGASF 122 (417)
T ss_pred HccCCchHHHHHHHHHHhccccee
Confidence 3 3333457777778888765433
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=91.59 E-value=1.3 Score=42.22 Aligned_cols=83 Identities=8% Similarity=-0.012 Sum_probs=55.6
Q ss_pred HHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCcc
Q 020432 200 AIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSL 279 (326)
Q Consensus 200 ~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~ 279 (326)
-.+.|+|.+...+...++++|..|+++|.. .-++.-...=+|+.++..+.+.+++. |.+
T Consensus 96 F~l~G~G~~~s~T~~lALl~D~~~e~~R~~--~v~ivw~Mli~G~iv~ai~~g~lL~~--~s~----------------- 154 (403)
T PF03209_consen 96 FLLYGLGVHASGTSFLALLADLAPEERRPR--VVAIVWVMLIVGIIVSAIVFGRLLDP--FSP----------------- 154 (403)
T ss_pred HHHHHhhHhHhHHHHHHHHHhcCCHhhhhh--hHHHHHHHHHHHHHHHHHHHHHHccc--cCH-----------------
Confidence 345688888889999999999999988743 34454444457777888888877753 433
Q ss_pred ccccccceeeeecchHhHHHHHHHHHHHhh
Q 020432 280 ISTSYISVTRFGLGLIPAICSLVSVAVTFT 309 (326)
Q Consensus 280 ~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~ 309 (326)
..+.-.+...+.+.+++.++.+|.
T Consensus 155 ------~rL~~v~~~~a~i~~~l~~ia~wg 178 (403)
T PF03209_consen 155 ------ERLIQVIQGVALIALLLNLIALWG 178 (403)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112234445666666666666554
No 246
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=91.28 E-value=5.9 Score=38.90 Aligned_cols=72 Identities=13% Similarity=-0.012 Sum_probs=33.6
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCC----ccchhccchhhhhHHHHHHHHHhhhheeeecCCCc
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKT----HADLENQYRWIAYSSIFIGCCFVGIFLSRTEEPRL 80 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~~ 80 (326)
-++||.|..+.-..+-.+|..+...+-+.+.+. +..+ .+..=+-|..-+.+..++.++..++-.+..||...
T Consensus 159 ~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L-g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 159 TVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL-GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred CccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh-cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 578888877755443344444433333332222 2111 00101235555555555555554444455677443
No 247
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=90.82 E-value=0.15 Score=50.11 Aligned_cols=75 Identities=13% Similarity=0.105 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcch
Q 020432 118 NVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMS 193 (326)
Q Consensus 118 ~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~ 193 (326)
......++.|.+. +|+++.....+...-=+..+++.++|+++++|+.|||...+.+.+.+..+.+++.+.+|.+.
T Consensus 28 g~l~pll~vy~kQ-LGl~p~~~Gtl~g~~P~v~~L~~P~~g~~Adr~r~~r~lllgsl~~~v~a~fll~fv~P~~~ 102 (618)
T KOG3762|consen 28 GSLFPLLAVYFKQ-LGLNPAVVGTLTGTLPLVEFLAAPLWGFLADRYRKRRPLLLGSLLLSVTATFLLVFVPPVDK 102 (618)
T ss_pred cccchHHHHHHHH-cCCCHHHhhhhhhHHHHHHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHHHheeeccCccc
Confidence 3334455555544 56666555444444444567888999999998877676666666666666666667766543
No 248
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=90.31 E-value=2.9 Score=40.05 Aligned_cols=58 Identities=17% Similarity=0.157 Sum_probs=41.9
Q ss_pred chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhh
Q 020432 192 MSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVL 251 (326)
Q Consensus 192 ~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~ 251 (326)
+.+.+++..+.-|+..|..++..+..+.|-+++++|+ +-.+..++.+-+|..+++.+.
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~RE--Fslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDRE--FSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHH--HHHHHHHHHhhHHHHHHHHHH
Confidence 4567777778889888888888888888877655442 445777888877776666543
No 249
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=88.87 E-value=2 Score=42.51 Aligned_cols=90 Identities=9% Similarity=0.073 Sum_probs=53.6
Q ss_pred HHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhH-HHHHHHHHhh
Q 020432 127 YVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAF-MYVLAIFVGI 205 (326)
Q Consensus 127 Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~-~l~~~~~~g~ 205 (326)
..+.+.+.+.+..+++..+.....++..++...+.+|+|- |.+.+.|.++..++.++-.|.. +.+. .+...++.|+
T Consensus 71 ~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~-R~v~i~G~~v~~~g~~lssF~~--~i~~l~lt~gvi~G~ 147 (509)
T KOG2504|consen 71 ELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGC-RTVMIAGGLVAALGLLLSSFAT--SLWQLYLTFGVIGGL 147 (509)
T ss_pred HHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCc-hHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHhhc
Confidence 3334444434444555555555566667788888888884 6677888877666666666543 2433 3344667778
Q ss_pred HHHHHHHHHHHHhH
Q 020432 206 ANALMMVTGISMQN 219 (326)
Q Consensus 206 g~~~~~~~~~am~a 219 (326)
|.|....-.-.++.
T Consensus 148 G~~~~~~paiviv~ 161 (509)
T KOG2504|consen 148 GLGLIYLPAVVILG 161 (509)
T ss_pred cchhhhcchhhhhh
Confidence 87765544433333
No 250
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=88.59 E-value=8.6 Score=37.71 Aligned_cols=58 Identities=12% Similarity=0.137 Sum_probs=39.2
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhh
Q 020432 193 SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQ 252 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~ 252 (326)
+++.....++.++|-=...+...++.+-..+..-. +.+.|.+-+.+-.++.+++.+.+
T Consensus 394 ~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~--s~~ma~wfLt~a~~~~l~g~va~ 451 (498)
T COG3104 394 VWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALK--SFIMAMWFLTVAAGQTLGGQVAG 451 (498)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHH--HHHHHHHHHHHHHHHHhhceecc
Confidence 34555566677777766667777888777776433 45677777777777777766655
No 251
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=88.19 E-value=11 Score=32.44 Aligned_cols=83 Identities=14% Similarity=0.186 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHh
Q 020432 141 LVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNV 220 (326)
Q Consensus 141 ~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD 220 (326)
.......+...++.++.+.+.+|.|+ |+.+..+......+.....+.+........+.....|++.+.......++++|
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 121 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGR-RKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSE 121 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccc-hHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 33334445555556777778766675 44455544332233233333332133444445555788888888888999999
Q ss_pred hhcC
Q 020432 221 LVGE 224 (326)
Q Consensus 221 ~id~ 224 (326)
..+.
T Consensus 122 ~~~~ 125 (338)
T COG0477 122 WFPE 125 (338)
T ss_pred hcCc
Confidence 9876
No 252
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=87.80 E-value=0.97 Score=42.59 Aligned_cols=108 Identities=13% Similarity=0.077 Sum_probs=70.1
Q ss_pred hhHhHHHHHHHHHHHh--hcCCc-----chhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCC--CCCceEEEehhHHHHH
Q 020432 171 YSAGGVLWVFCGAGIL--ILPMN-----MSAFMYVLAIFVGIANALMMVTGISMQNVLVGED--LSGCAFVCGTLSFLDK 241 (326)
Q Consensus 171 ~~~~~~l~~~~~~~l~--~~~~~-----~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~--~r~~g~i~s~~sf~~K 241 (326)
...|.++.+++.+++. ..++. ....+++...+.++|.|+.=+...++.+|-.|++ +|.+.+ |..+-+..+
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~-F~~fY~~in 82 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSF-FNWFYWGIN 82 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHH-HHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhh-HHHHHHHHh
Confidence 4455555555544422 22322 1245677777889999999899999999999875 344554 788889999
Q ss_pred HHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHh
Q 020432 242 MSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTF 308 (326)
Q Consensus 242 l~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~ 308 (326)
+|.-++..+.+++.+. .+. .....+|.++++++++.++
T Consensus 83 ~G~~~~~~~~~~i~~~----------------------------~~~-~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 83 IGSLFSPTLVPYIQQN----------------------------YGW-FLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHCCCHHHHC----------------------------S-H-HHHHHHHHHHHHHHHHHHH
T ss_pred hhhHhhcccchhhccc----------------------------cch-hhhhhHHHHHHHHHHHHHH
Confidence 9877777666654221 222 2234789998888887654
No 253
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=86.49 E-value=7 Score=37.99 Aligned_cols=122 Identities=11% Similarity=-0.045 Sum_probs=60.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCCc--c------------cch-hhhHHHHHHHHHHHHHHHHHHH
Q 020432 100 KILYYQVALVYMLTRLVVNVSQAYLAFYVIN--DLRMGQ--S------------AKA-LVPAIIYICSFIVSILLQEMAW 162 (326)
Q Consensus 100 N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~--~l~~~~--~------------~~~-~~~~~~~i~~~i~~~~~~~l~k 162 (326)
.|+.+++++..++.+.+......|+.=|+-. +.|+|. + -+. +-+....+..-+.+....++.|
T Consensus 278 pr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~ 357 (498)
T KOG0637|consen 278 PRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSR 357 (498)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567778888888887655433222222211 112221 1 011 1122344445556677778888
Q ss_pred hcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC
Q 020432 163 TGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE 224 (326)
Q Consensus 163 ~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~ 224 (326)
|+|.||. |+.+.....++..+....+ +......-....|+-.+....++|+.++..-+.
T Consensus 358 ~~g~r~~-y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~ 416 (498)
T KOG0637|consen 358 KFGTRKR-YWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALALYAIL 416 (498)
T ss_pred hcCcceE-EeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHHHHHh
Confidence 8874343 4444432223222222222 223344444455555566667777777766544
No 254
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=83.35 E-value=25 Score=34.26 Aligned_cols=112 Identities=13% Similarity=-0.010 Sum_probs=58.0
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhh--cC--Ccchh--HHHHHHHHHhhHHHHHHH
Q 020432 139 KALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILI--LP--MNMSA--FMYVLAIFVGIANALMMV 212 (326)
Q Consensus 139 ~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~--~~--~~~~~--~~l~~~~~~g~g~~~~~~ 212 (326)
..+..++.++..+...+..-++.+|.| -|.+..++..+.+++..+=.. .| ++..+ .......+.+...-..+.
T Consensus 81 ~~wlsmIym~v~vp~gf~~mw~ldk~G-LR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~ 159 (480)
T KOG2563|consen 81 ADWLSMIYMVVSVPFGFAAMWILDKFG-LRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILG 159 (480)
T ss_pred HHHHHHHHHHHHHHHhhHHHHhhcccc-hHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhc
Confidence 345555556666666666667776666 477777777766554432111 11 01122 222333333333322222
Q ss_pred HHHHHhHhhh-cCCCCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 213 TGISMQNVLV-GEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 213 ~~~am~aD~i-d~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
++ +-++.+- +.|+| +.-.+.-++.+.+|.++|-.+...+
T Consensus 160 lP-skiA~~WF~~~qr--a~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 160 LP-SKIAAVWFPPDQR--AIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred cc-cHHHHhhCCcchh--hhhhhHHHhcchHHHHHHhhcccee
Confidence 22 3344443 34666 3446777888888877776655543
No 255
>PTZ00207 hypothetical protein; Provisional
Probab=81.09 E-value=56 Score=33.10 Aligned_cols=57 Identities=14% Similarity=0.030 Sum_probs=39.8
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhH-HHHhhhh
Q 020432 194 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGI-AVYVLQS 253 (326)
Q Consensus 194 ~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i-~~~i~~~ 253 (326)
..+++..++.|+|.|..+.+..+...|.-+.|- |..|-+.....=+|.=+ .+.+.|.
T Consensus 453 ~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~---g~~yN~~~~a~pigs~~~n~~l~G~ 510 (591)
T PTZ00207 453 AALPLPYFIAAFANGFMAATIALVTRTIFAKDP---AKHYNFCFLGSVLSAIFLNRLLYGE 510 (591)
T ss_pred cHhHHHHHHHHHHhhHhHHHHHHHHHHHhccch---HHHhhHHhHHHHHHHHHHHHHHHHH
Confidence 467888899999999888888888888888333 66677766666665422 2444443
No 256
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=80.38 E-value=63 Score=31.87 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=26.6
Q ss_pred CcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Q 020432 87 NSHARISWAYWFKKILYYQVALVYMLTRLVVNVS 120 (326)
Q Consensus 87 ~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~ 120 (326)
|.++.+.++.+.|.|.++.+.+..++.....+..
T Consensus 268 k~~~~~s~k~i~~SkyL~~ial~vl~Y~v~inLv 301 (509)
T COG3202 268 KLGLIESFKMILRSKYLGAIALLVLAYGVSINLV 301 (509)
T ss_pred cCcHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3457889999999999988877777777766665
No 257
>PRK03612 spermidine synthase; Provisional
Probab=79.48 E-value=54 Score=32.64 Aligned_cols=50 Identities=10% Similarity=-0.033 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHH
Q 020432 112 LTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMA 161 (326)
Q Consensus 112 ~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~ 161 (326)
++..+.-+........+.+.+|.+....+.+..+.+.+.-+|+.+..++.
T Consensus 25 ~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~ 74 (521)
T PRK03612 25 VCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLL 74 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 33333334455566666667776433334444444445555555555544
No 258
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=79.04 E-value=2.7 Score=40.89 Aligned_cols=130 Identities=14% Similarity=-0.031 Sum_probs=71.7
Q ss_pred HHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCc---chhHHHHHHHHHh-hHHHHHHHHHHHHhHhhhcCCCCCceEE
Q 020432 157 LQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMN---MSAFMYVLAIFVG-IANALMMVTGISMQNVLVGEDLSGCAFV 232 (326)
Q Consensus 157 ~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~---~~~~~l~~~~~~g-~g~~~~~~~~~am~aD~id~~~r~~g~i 232 (326)
...+..+.|| |+.-+.|.+++++..+.+-+ +.+ +.....+...+.. ++.-+.+...+...+++-+.+.| |+-
T Consensus 368 tv~~id~iGR-k~iq~~GF~~~~i~~~~~~~-~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR--~t~ 443 (538)
T KOG0252|consen 368 TVYFIDIIGR-KYIQLMGFFIMTIFFFVIAG-PYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVR--STC 443 (538)
T ss_pred EEEEeehhhh-HHHHHhhHHHHHHHHHHHcC-CcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHh--hhh
Confidence 3334666775 66667777665554443332 222 1111222222221 22223345556667788888888 778
Q ss_pred EehhHHHHHHHhhHHHHhhhhcccCCCccccCCCccccccccCCCccccccccceeeeecchHhHHHHHHHHHHHhhccC
Q 020432 233 CGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLTVLDNNSLISTSYISVTRFGLGLIPAICSLVSVAVTFTMKL 312 (326)
Q Consensus 233 ~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iP~~~~l~~~i~~~~y~l 312 (326)
+++....-|+|.-+|....++.-. ..|-+ ..+.|..+ ++-+.|++++++.-++.|-
T Consensus 444 hGIsAA~GK~GAivg~~~F~~~t~-~~yp~----------------------~~g~~~v~-~i~~~~~~~gi~~T~l~pE 499 (538)
T KOG0252|consen 444 HGISAASGKAGAIVGAFGFLYLTD-HNYPP----------------------NIGVRNVF-IILAGCMLLGILFTLLIPE 499 (538)
T ss_pred hhHHHHhccchHHHHHHHhhHhhh-ccCCc----------------------cccchHHH-HHHHHHHHHhHheeEEeec
Confidence 999999999997777766664321 11211 13344443 5666677777776666664
Q ss_pred CC
Q 020432 313 HT 314 (326)
Q Consensus 313 ~~ 314 (326)
++
T Consensus 500 tk 501 (538)
T KOG0252|consen 500 TK 501 (538)
T ss_pred cc
Confidence 33
No 259
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=77.66 E-value=4.4 Score=37.17 Aligned_cols=61 Identities=8% Similarity=0.010 Sum_probs=45.8
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHhhhhcc
Q 020432 193 SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYVLQSYQ 255 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l 255 (326)
.+..++..++.|.|.+...+..+..++|+-+.++++ ...+....+..+|.-++..+.+.+.
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~--~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAANPYVSILGPIETAA--SRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHH--HHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 456777788899999999999999999999876542 2355666777777777766666543
No 260
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=77.39 E-value=5.3 Score=38.78 Aligned_cols=141 Identities=14% Similarity=0.089 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHH----HHhcccchhhhhHhHHHHH
Q 020432 104 YQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEM----AWTGQRLKAYYSAGGVLWV 179 (326)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l----~k~~gkkk~~~~~~~~l~~ 179 (326)
..+....+-.+++...-.+|.+-|.+. +|.|..+.+++..+.=+..++..++.+.. .-|+||||.....+.....
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 333444445566666667888888765 46666677666555545555555555544 3367876664444444333
Q ss_pred HHHHHHhhcC---------Ccc-hhHHHHHHHHHh-----hHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHh
Q 020432 180 FCGAGILILP---------MNM-SAFMYVLAIFVG-----IANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSC 244 (326)
Q Consensus 180 ~~~~~l~~~~---------~~~-~~~~l~~~~~~g-----~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~ 244 (326)
++..++.+.+ ++. ....-+...+.| +..-..+.-.=+.++|....|+++.= -.|.++|..-+|.
T Consensus 114 ~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~-Ans~f~~f~avGn 192 (498)
T KOG0637|consen 114 VSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTR-ANSVFSFFMAVGN 192 (498)
T ss_pred HHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhc-cchhHHHHHHhcc
Confidence 3333222211 111 111111222222 23334445556788888865433321 2566666666654
Q ss_pred hH
Q 020432 245 GI 246 (326)
Q Consensus 245 ~i 246 (326)
.+
T Consensus 193 vL 194 (498)
T KOG0637|consen 193 VL 194 (498)
T ss_pred ee
Confidence 33
No 261
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=76.86 E-value=60 Score=31.54 Aligned_cols=55 Identities=9% Similarity=0.193 Sum_probs=35.6
Q ss_pred hHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHHHh
Q 020432 194 AFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAVYV 250 (326)
Q Consensus 194 ~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~~i 250 (326)
+..++...+.|+-.|-........-|+.+|.++|+. ....+++.--+|.++|..+
T Consensus 373 ~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~--aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 373 AYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREV--AGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 445556677777777666666666788887655432 2456777777777666543
No 262
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=74.08 E-value=8.9 Score=29.17 Aligned_cols=60 Identities=10% Similarity=-0.127 Sum_probs=33.6
Q ss_pred CccchhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhhheeeecC
Q 020432 8 NSTSRVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGIFLSRTEE 77 (326)
Q Consensus 8 d~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~~~~~tkE 77 (326)
++++|.+.++.-.....+|..+...+...+.+ ..||+....+.+++.++......+..+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 81 PPEERGVALGLMSAGIALGPLLGPPLGGVLAQ----------FLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred ChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc----------ccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 45678888888777777776655444433321 2355555445555555544444444444
No 263
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=70.92 E-value=14 Score=36.18 Aligned_cols=124 Identities=10% Similarity=0.070 Sum_probs=60.6
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-ccchhhhH----HHHHHHHHHHHHHHHHHHhcccchhhhhH
Q 020432 99 KKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQ-SAKALVPA----IIYICSFIVSILLQEMAWTGQRLKAYYSA 173 (326)
Q Consensus 99 ~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~-~~~~~~~~----~~~i~~~i~~~~~~~l~k~~gkkk~~~~~ 173 (326)
.+++.......+.+.+...+.......-+-....+... ........ ...+..++.++..+.++.+.|| |.....
T Consensus 19 ~~~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~gr-k~~L~~ 97 (463)
T KOG2816|consen 19 SMRHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRYGR-KVVLLL 97 (463)
T ss_pred hhhHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhh-hhhHHH
Confidence 44444444555555555544444444444444333211 11111111 2234567777888888988885 544444
Q ss_pred hHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCC
Q 020432 174 GGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSG 228 (326)
Q Consensus 174 ~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~ 228 (326)
......+.-..+.+.. ++.++..-+ ..|.+......++.++|++.+++|.
T Consensus 98 ~~~~~~l~~~~~~~~~----~~~~~~~~l-~g~~~~~~s~~~a~vadis~~~~R~ 147 (463)
T KOG2816|consen 98 PLFGTILPALCLLFQG----YWFFLLLGL-SGGFSAIFSVGFAYVADISSEEERS 147 (463)
T ss_pred HHHHHHHhHHHHHHHH----HHHhhhccc-ccchhhhhhhhhhheeeccchhHHH
Confidence 4433333323233222 222221111 1244455667778899999876664
No 264
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=69.23 E-value=1.1e+02 Score=29.47 Aligned_cols=128 Identities=9% Similarity=0.015 Sum_probs=65.7
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHHHHHHHHh-ccC---CC-ccch----hccchhhhhHHHHHHHHHhhhheeeecCCC
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAIAFIVFSV-STA---KT-HADL----ENQYRWIAYSSIFIGCCFVGIFLSRTEEPR 79 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~~~~~~~~-~~~---~~-~~~~----~~g~~~~~~i~~~i~~~~~~~~~~~tkE~~ 79 (326)
++|-.-.|+...++.+.|.++...+...+-+. +-+ .+ ..|+ -.||.+......+++..... +..||+.
T Consensus 164 ~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~---~~kke~~ 240 (510)
T KOG3574|consen 164 RENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVA---LLKKEND 240 (510)
T ss_pred HhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHH---HhcCCCc
Confidence 34444567777777787776654432221110 000 00 0110 13566554444444333333 3477765
Q ss_pred cccCCCCCcc---hhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccch
Q 020432 80 LKMGLRGNSH---ARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKA 140 (326)
Q Consensus 80 ~~~~~~~~~~---~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~ 140 (326)
.+.+++++.+ ..+.++.+.+-|+-+++.+..+..-++.+...+..+.=..+ .|.+.+..+
T Consensus 241 ~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~La 303 (510)
T KOG3574|consen 241 ESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELA 303 (510)
T ss_pred hhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHhe
Confidence 4432322233 34466788888888888877777777777665554443333 355544343
No 265
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=67.58 E-value=59 Score=31.28 Aligned_cols=103 Identities=10% Similarity=-0.004 Sum_probs=59.9
Q ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHH
Q 020432 138 AKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISM 217 (326)
Q Consensus 138 ~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am 217 (326)
..+++......+.++++..|+.++.+.|| |+.+........+.+++--. ..+...+++.-.+.|+|.|+ .+..-++
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d~~gr-r~~f~~T~l~t~v~~~is~~--spnf~~L~~f~~l~~~g~gg-~pv~~~~ 189 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSADTIGR-RKGFNLTFLVTGVFGVISGA--SPNFASLCVFRALWGFGVGG-LPVDSAI 189 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehhhhhc-chhhhhhHHHHHHHHHhhcC--CCCeehhhHHHHHHhccCCC-ccHhHHH
Confidence 34555556677889999999999988886 44344433332222222221 12344566666777788777 6666677
Q ss_pred hHhhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 218 QNVLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 218 ~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
..+..+.-.| +. -.++++.--+|+.+.
T Consensus 190 yle~lp~~~r--~~-~~V~~~~waig~v~e 216 (528)
T KOG0253|consen 190 YLEFLPSSHR--WL-LTVMSFFWAIGQVFE 216 (528)
T ss_pred HHHhccCcCC--Cc-chhHHHHHHHHHHHH
Confidence 7787765444 32 344445555554444
No 266
>PF04018 DUF368: Domain of unknown function (DUF368); InterPro: IPR007163 This is a predicted transmembrane family of unknown function. Proteins usually have between 6 and 9 predicted transmembrane segments.
Probab=67.02 E-value=96 Score=27.83 Aligned_cols=14 Identities=21% Similarity=-0.033 Sum_probs=8.4
Q ss_pred hhHHHHhhchhHHH
Q 020432 92 ISWAYWFKKILYYQ 105 (326)
Q Consensus 92 ~~l~~~~~N~~~~~ 105 (326)
+++|+.+|..++..
T Consensus 43 ~~~~~~~~~~~~~f 56 (257)
T PF04018_consen 43 GRFKEAWKKINLKF 56 (257)
T ss_pred HHHHHHHHhhcHHH
Confidence 45666666666544
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=65.13 E-value=1.7e+02 Score=30.07 Aligned_cols=56 Identities=11% Similarity=-0.127 Sum_probs=24.2
Q ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHHhccCCCccchhccchhhhhHHHHHHHHHhhh
Q 020432 12 RVVLTSCRNAFTMVANLSLYAIAFIVFSVSTAKTHADLENQYRWIAYSSIFIGCCFVGI 70 (326)
Q Consensus 12 R~~l~s~R~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~i~~~~~~~ 70 (326)
|.+.-.+=....++|+++...+...+....+.. ++ ..||...-.+.+++.++..++
T Consensus 122 ~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f--g~-~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 122 RSRFFSFFYFAINAGSLISTIITPILRGDVGCF--GC-QDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cc-CcchHHHHHHHHHHHHHHHHH
Confidence 444555555555556555444433332221111 12 246765544444444444443
No 268
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=64.35 E-value=1.9 Score=43.03 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=2.7
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHH
Q 020432 196 MYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIA 247 (326)
Q Consensus 196 ~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~ 247 (326)
+++..++.|+|.+..+++..+.+=|-++.+. .+++.|......=+|-++|
T Consensus 144 f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~--splYiGi~~~~~~lGPa~G 193 (539)
T PF03137_consen 144 FILGQLLIGIGATPLYTLGITYIDDNVSKKN--SPLYIGILYAMSILGPALG 193 (539)
T ss_dssp --------SSS-----------------------------------------
T ss_pred HHHHHHHHhccccCCccceeeeecccccccc--CccchhhhhHHhhccHHHH
Confidence 4456778899988888888776666555433 3555555555444444443
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=62.19 E-value=1.3e+02 Score=28.97 Aligned_cols=19 Identities=5% Similarity=0.062 Sum_probs=11.2
Q ss_pred eecchHhHHHHHHHHHHHh
Q 020432 290 FGLGLIPAICSLVSVAVTF 308 (326)
Q Consensus 290 ~~~~~iP~~~~l~~~i~~~ 308 (326)
.++..++.+..++++++..
T Consensus 183 ~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 183 LIYFITSTVILLLCFVLYL 201 (406)
T ss_pred ehhHHHHHHHHHHHHHHHH
Confidence 4455666666666666544
No 270
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=53.09 E-value=59 Score=23.80 Aligned_cols=53 Identities=15% Similarity=0.204 Sum_probs=34.2
Q ss_pred HHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhHhHHHHHHH
Q 020432 128 VINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSAGGVLWVFC 181 (326)
Q Consensus 128 ~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~~~~l~~~~ 181 (326)
++...+.+....+.+.....++-++|++...++.++.. +++.+..+.+...+.
T Consensus 18 M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~-~~~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 18 MQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSR-PRRLLRAGLLLTVLS 70 (85)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-HHHHHHHHHHHHHHH
Confidence 34444555555566677788889999999988877654 355556655543333
No 271
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=48.22 E-value=87 Score=30.10 Aligned_cols=53 Identities=9% Similarity=0.105 Sum_probs=30.5
Q ss_pred hhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCC-ceEEEehhHHHHHHHhhHHH
Q 020432 193 SAFMYVLAIFVGIANALMMVTGISMQNVLVGEDLSG-CAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 193 ~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~-~g~i~s~~sf~~Kl~~~i~~ 248 (326)
.++......+.|+..|-...+...+-|..++.++++ .|. .+++..=.|...|.
T Consensus 343 ~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~---~m~~fl~~Gl~~G~ 396 (406)
T KOG1479|consen 343 DGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGN---LMVFFLVGGLALGS 396 (406)
T ss_pred chHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHH---HHHHHHHHHHHHhh
Confidence 345566667777777666666666777776554432 333 45555544544443
No 272
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=47.66 E-value=2.7e+02 Score=26.98 Aligned_cols=26 Identities=8% Similarity=0.267 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 103 YYQVALVYMLTRLVVNVSQAYLAFYVI 129 (326)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~ 129 (326)
++.+..+|.++-+=..... ..|+..+
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~lL~ 58 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLLLQ 58 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHHhc
Confidence 4455667887777666666 7787776
No 273
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=42.77 E-value=2.2e+02 Score=26.82 Aligned_cols=221 Identities=10% Similarity=-0.005 Sum_probs=0.0
Q ss_pred cCCCcccCCCCCcchhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHH
Q 020432 76 EEPRLKMGLRGNSHARISWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSI 155 (326)
Q Consensus 76 kE~~~~~~~~~~~~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~ 155 (326)
+|+....+++++.+-++....+.+--+.-...++.+..+.+..-++...-+ .+| ..-......+.+..+.
T Consensus 7 ~~~~~~s~~~~~~~~r~~~~~~knv~i~s~~fl~~f~a~~gl~nlq~~vn~----~lg------~~sl~~~y~~l~~s~m 76 (390)
T KOG3097|consen 7 YPNYNESEEEERRYRRKRLGILKNVLILSIAFLLTFTAYLGLQNLQTSVNY----DLG------TVSLGALYLSLIDSSM 76 (390)
T ss_pred ccCCCCCCcccchhcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc----Ccc------cchhhhhhHHHHHHHH
Q ss_pred HHHHHHHhcccchhhhhHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhhcC----C------
Q 020432 156 LLQEMAWTGQRLKAYYSAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLVGE----D------ 225 (326)
Q Consensus 156 ~~~~l~k~~gkkk~~~~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~id~----~------ 225 (326)
+.+.+.|++|- |+++.++...-...-..=+. .....+.......|+|.+..+...=.-++..-+. +
T Consensus 77 ~~~~~Ir~~g~-K~tm~lav~~Y~lyiA~Nl~---pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~ 152 (390)
T KOG3097|consen 77 FMPLLIRFLGT-KWTMVLAVFPYALYIAANLE---PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGD 152 (390)
T ss_pred HHHHHHHHHhh-HHHHHHHHHHHHHHHHhhcc---hhHHhhccHHHhhccccccccccCcceecHHHHHHHHhhhhhccC
Q ss_pred ---CCCceEEEehhHHHHHHHhhHHHHhhhhcccCCCccccCCCcccccc---------------ccCCCccccccccce
Q 020432 226 ---LSGCAFVCGTLSFLDKMSCGIAVYVLQSYQSMSPTVLDNNSSITSLT---------------VLDNNSLISTSYISV 287 (326)
Q Consensus 226 ---~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~l~~~~y~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 287 (326)
.|--|..+.++-..+-.|..++..+....+....+.+|. +.+.+ ...|.+. ..
T Consensus 153 ~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~---t~~~~CG~~f~~~g~~a~~nlt~p~~~------~~ 223 (390)
T KOG3097|consen 153 GMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNL---TFSVECGANFCGSGDKAEGNLTLPPSY------VI 223 (390)
T ss_pred ceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCccc---eeeeecccccCCccccccCCccCCCCC------ce
Q ss_pred eeeecchHhHHHHHHHHHHHhhccCCCCCCcc
Q 020432 288 TRFGLGLIPAICSLVSVAVTFTMKLHTPYSKP 319 (326)
Q Consensus 288 i~~~~~~iP~~~~l~~~i~~~~y~l~~~~~~~ 319 (326)
+-....++|..+...-++.+..=.+.+..++.
T Consensus 224 lvls~i~L~c~via~~~~~~~~~~l~r~~~~r 255 (390)
T KOG3097|consen 224 LVLSLIFLPCMVIAVLIMLFFLGALKRYGEKR 255 (390)
T ss_pred EEeeHHHHHHHHHHHHHHHHHHHHHhhhhhhh
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=41.02 E-value=11 Score=34.49 Aligned_cols=52 Identities=13% Similarity=0.236 Sum_probs=2.4
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHhHhhhcCCCCCceEEEehhHHHHHHHhhHHH
Q 020432 195 FMYVLAIFVGIANALMMVTGISMQNVLVGEDLSGCAFVCGTLSFLDKMSCGIAV 248 (326)
Q Consensus 195 ~~l~~~~~~g~g~~~~~~~~~am~aD~id~~~r~~g~i~s~~sf~~Kl~~~i~~ 248 (326)
..++...+.|+-+|-........-|..++.++|+ ....+++|.-=+|..+|.
T Consensus 250 ~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e--~aG~~~~~~L~~Gl~~Gs 301 (309)
T PF01733_consen 250 WFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERE--LAGSVMSFFLSFGLFIGS 301 (309)
T ss_dssp -----------------HHHH---------------------------------
T ss_pred HHHHHHHHHHHccchhhhceeeeCCCcCCHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 3445566677766666556655667888755432 123355555555554443
No 275
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=39.52 E-value=3.3e+02 Score=25.68 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=38.1
Q ss_pred chhhhHHHHhhchhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhcCC-cccchhhhHHHHHHHHHHHHHHHHHH
Q 020432 89 HARISWAYWFKKILYYQVALVYMLTRLVVNVS-QAYLAFYVINDLRMG-QSAKALVPAIIYICSFIVSILLQEMA 161 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~~~~~~~~~~~-~~~~~~Y~~~~l~~~-~~~~~~~~~~~~i~~~i~~~~~~~l~ 161 (326)
..++.++.+.+||+.+.+.....+.-..+.+. ..+-|.-- ..+ +.-.+.+.-..+++.|+|+.+.+++.
T Consensus 232 ~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~----~~~~~~P~GlIFssFM~a~MlGS~lf~~l~ 302 (354)
T PF05631_consen 232 SFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD----PDDEELPLGLIFSSFMVAMMLGSSLFSRLL 302 (354)
T ss_pred HHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec----CCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888888766554433333332221 11112111 110 11135666677889999999987764
No 276
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=36.48 E-value=57 Score=33.83 Aligned_cols=90 Identities=10% Similarity=0.091 Sum_probs=41.1
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhcccchhhhhH
Q 020432 94 WAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTGQRLKAYYSA 173 (326)
Q Consensus 94 l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~gkkk~~~~~ 173 (326)
.+...+++.|+.++....+.+............-.....+.+.+....+....-++..+...++.+..-|+.| -+..-.
T Consensus 89 ~q~~~~~k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~Hr-Pr~Ig~ 167 (735)
T KOG3626|consen 89 LQRFANIKMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHR-PRWIGI 167 (735)
T ss_pred ceeccCcchHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCc-cceeee
Confidence 3445566777655433333333222333333444444555543333333333334445545555555434333 334455
Q ss_pred hHHHHHHHHHH
Q 020432 174 GGVLWVFCGAG 184 (326)
Q Consensus 174 ~~~l~~~~~~~ 184 (326)
|+++++++.++
T Consensus 168 G~~~m~lgsll 178 (735)
T KOG3626|consen 168 GLVLMGLGSLL 178 (735)
T ss_pred chhHHHHHHHH
Confidence 56565554443
No 277
>PF15086 UPF0542: Uncharacterised protein family UPF0542
Probab=32.93 E-value=1.2e+02 Score=21.38 Aligned_cols=41 Identities=15% Similarity=-0.053 Sum_probs=22.0
Q ss_pred HHHHHHHHhcCCcccchhhhHHHHHHHHHHHHHHHHHHHhc
Q 020432 124 LAFYVINDLRMGQSAKALVPAIIYICSFIVSILLQEMAWTG 164 (326)
Q Consensus 124 ~~~Y~~~~l~~~~~~~~~~~~~~~i~~~i~~~~~~~l~k~~ 164 (326)
+-|-+.|+-.+|-+++..+.++.+-.-+++.+++-+++|..
T Consensus 8 ~~~~v~~vAkdP~~Fl~~vll~LtPlfiisa~lSwkLaK~i 48 (74)
T PF15086_consen 8 ASYIVEWVAKDPYEFLTTVLLILTPLFIISAVLSWKLAKAI 48 (74)
T ss_pred HHHHHHHHHcChHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 33445556665555555555544444455556666665544
No 278
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=32.68 E-value=28 Score=31.04 Aligned_cols=19 Identities=21% Similarity=0.027 Sum_probs=12.7
Q ss_pred hhHHHHHHHHHhhhheeee
Q 020432 57 AYSSIFIGCCFVGIFLSRT 75 (326)
Q Consensus 57 ~~i~~~i~~~~~~~~~~~t 75 (326)
..++|.++.+..++-++.|
T Consensus 116 ~~IlG~iAliliviG~~lT 134 (288)
T COG4975 116 QIILGFIALILIVIGIYLT 134 (288)
T ss_pred hHHHHHHHHHHHHHhheEe
Confidence 3467888877777755544
No 279
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=32.67 E-value=4.9e+02 Score=25.59 Aligned_cols=40 Identities=5% Similarity=-0.013 Sum_probs=31.2
Q ss_pred HHHHHHHhHhhhcCC--CCCceEEEehhHHHHHHHhhHHHHhhhhc
Q 020432 211 MVTGISMQNVLVGED--LSGCAFVCGTLSFLDKMSCGIAVYVLQSY 254 (326)
Q Consensus 211 ~~~~~am~aD~id~~--~r~~g~i~s~~sf~~Kl~~~i~~~i~~~~ 254 (326)
..+.|+...|+...+ +| .|+..+.+.-+|.-+++.+..++
T Consensus 147 S~lFW~fandi~t~~qakR----fy~l~~~ganlg~i~sg~~~~~~ 188 (472)
T TIGR00769 147 SLLFWGFANQITTIDEAKR----FYALFGLGANVALIFSGRTIKYF 188 (472)
T ss_pred HHHHHHHHHhcCCHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 348899999999764 44 58899998888887777776654
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=28.77 E-value=1.8e+02 Score=28.30 Aligned_cols=22 Identities=9% Similarity=-0.061 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHhccc
Q 020432 145 IIYICSFIVSILLQEMAWTGQR 166 (326)
Q Consensus 145 ~~~i~~~i~~~~~~~l~k~~gk 166 (326)
...+..++..+....+.+|+..
T Consensus 53 ~~~v~~l~~~~~~~~~~~~i~~ 74 (437)
T TIGR00939 53 ASQLPSLLFNSLNLFLIFRIPV 74 (437)
T ss_pred HHHHHHHHHHHHHHHHhhccCc
Confidence 3444444444444455556553
No 281
>PF13073 DUF3937: Protein of unknown function (DUF3937)
Probab=26.56 E-value=1.4e+02 Score=20.45 Aligned_cols=38 Identities=13% Similarity=0.257 Sum_probs=22.9
Q ss_pred HhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 020432 97 WFKKILYYQVALVYMLTRLVVNVSQAYLAFYVINDLRM 134 (326)
Q Consensus 97 ~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~ 134 (326)
+|+||...+..+..+.+-...+..-.|+-.|+....|.
T Consensus 1 mf~nkklir~gltlfv~L~vi~FtigYfq~Yl~saagi 38 (73)
T PF13073_consen 1 MFTNKKLIRFGLTLFVFLSVIDFTIGYFQTYLESAAGI 38 (73)
T ss_pred CCccchhhhhhhHHHHHHHHHHhhHHHHHHHHHhccCC
Confidence 47898887766544444444444556666666665543
No 282
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=25.92 E-value=81 Score=29.47 Aligned_cols=25 Identities=8% Similarity=-0.131 Sum_probs=17.1
Q ss_pred ccchhhhhhHHHHHHHHHhHHHHHH
Q 020432 9 STSRVVLTSCRNAFTMVANLSLYAI 33 (326)
Q Consensus 9 ~~eR~~l~s~R~~~~~~g~~~~~~~ 33 (326)
+++|.+..++=....++|.++....
T Consensus 67 ~~~~~~~F~~fY~~in~G~~~~~~~ 91 (372)
T PF00854_consen 67 DSRRDSFFNWFYWGINIGSLFSPTL 91 (372)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhhhhHHHHHHHHhhhhHhhccc
Confidence 5677777777777777887665443
No 283
>PF09877 DUF2104: Predicted membrane protein (DUF2104); InterPro: IPR019211 This entry is found in various hypothetical archaeal proteins, has no known function.
Probab=25.39 E-value=3e+02 Score=20.74 Aligned_cols=34 Identities=15% Similarity=0.152 Sum_probs=15.4
Q ss_pred hHhHHHHHHHHHHHhhcCCcchhHHHHHHHHHhh
Q 020432 172 SAGGVLWVFCGAGILILPMNMSAFMYVLAIFVGI 205 (326)
Q Consensus 172 ~~~~~l~~~~~~~l~~~~~~~~~~~l~~~~~~g~ 205 (326)
..++++..++...+.+..++.+....+...+.|+
T Consensus 38 ~~ALv~aiiG~~~~~vn~~~~~~~~~ig~~li~~ 71 (99)
T PF09877_consen 38 KLALVLAIIGGLILAVNSPSSPILYTIGAFLIGF 71 (99)
T ss_pred HHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHhh
Confidence 4445554555554444443333333344444443
No 284
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=24.96 E-value=5.2e+02 Score=23.37 Aligned_cols=41 Identities=10% Similarity=0.012 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHH-hc-ccchhhhhHhHHHHHHHHHHH
Q 020432 145 IIYICSFIVSILLQEMAW-TG-QRLKAYYSAGGVLWVFCGAGI 185 (326)
Q Consensus 145 ~~~i~~~i~~~~~~~l~k-~~-gkkk~~~~~~~~l~~~~~~~l 185 (326)
...++.++++++.....+ .. .|+...-+++.++|.++-+.+
T Consensus 170 PqaiGm~i~a~i~~~~~~~~~~~k~~~~nil~G~~w~ignl~~ 212 (269)
T PF06800_consen 170 PQAIGMLIGAFIFNLFSKKPFFEKKSWKNILTGLIWGIGNLFY 212 (269)
T ss_pred HHHHHHHHHHHHHhhcccccccccchHHhhHHHHHHHHHHHHH
Confidence 446677777777665432 22 221222245555666554433
No 285
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=24.79 E-value=1.1e+02 Score=19.83 Aligned_cols=19 Identities=11% Similarity=0.058 Sum_probs=14.3
Q ss_pred chhhhHHHHhhchhHHHHH
Q 020432 89 HARISWAYWFKKILYYQVA 107 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~ 107 (326)
..++.++.++|||..+..+
T Consensus 4 ~~~~~~~~f~~nk~a~~gl 22 (56)
T PF12911_consen 4 PWKDAWRRFRRNKLAVIGL 22 (56)
T ss_pred HHHHHHHHHHhCchHHHHH
Confidence 4567889999999876543
No 286
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=24.63 E-value=2.2e+02 Score=26.14 Aligned_cols=24 Identities=13% Similarity=0.330 Sum_probs=14.6
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHH
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLV 116 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~ 116 (326)
.-+..++++.|+.-++.+.+....
T Consensus 43 ~~~~~l~~~~W~~G~~~~~~g~~~ 66 (300)
T PF05653_consen 43 GGRSYLRRPLWWIGLLLMVLGEIL 66 (300)
T ss_pred hhhHHHhhHHHHHHHHHHhcchHH
Confidence 345677888887655555444443
No 287
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=24.11 E-value=1.5e+02 Score=28.01 Aligned_cols=38 Identities=16% Similarity=0.100 Sum_probs=24.8
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020432 93 SWAYWFKKILYYQVALVYMLTRLVVNVSQAYLAFYVIND 131 (326)
Q Consensus 93 ~l~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~ 131 (326)
++|.++|||-++.++ ...+++++..+-..+.++++.++
T Consensus 349 ~~~g~~~N~~~rvlL-v~~~tNlGs~iGt~~~~~~~l~~ 386 (388)
T COG1916 349 SFKGMYKNKFFRVLL-VVAFTNLGSMIGTFIGLPVLLNV 386 (388)
T ss_pred HHHHHHhchhHHHHH-HHHHhhhhhHHHHHHHHHHHHhh
Confidence 589999999987644 45556665555555555555444
No 288
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=22.26 E-value=3.8e+02 Score=20.78 Aligned_cols=17 Identities=6% Similarity=-0.066 Sum_probs=12.0
Q ss_pred hhhhHHHHhhchhHHHH
Q 020432 90 ARISWAYWFKKILYYQV 106 (326)
Q Consensus 90 ~~~~l~~~~~N~~~~~~ 106 (326)
..+..+.+++|+++..-
T Consensus 31 ~~~~~~~Ll~n~~y~ip 47 (113)
T PF10639_consen 31 LLQEIKFLLLNPKYIIP 47 (113)
T ss_pred HHHHHHHHHHhHHHHHH
Confidence 45667778888887653
No 289
>TIGR02484 CitB CitB domain protein. CobZ is essential for cobalamin biosynthesis (by knockout of the R. capsulatus gene ) and is complemented by the characterized precorrin 3B synthase CobG. The enzyme has been shown to contain flavin, heme and Fe-S cluster cofactors and is believed to require dioxygen as a substrate. This model identifies the C-terminal domain of the R. capsulatus CobZ, which, in most other species exists as a separate gene adjacent to CobZ.
Probab=20.88 E-value=7.3e+02 Score=23.61 Aligned_cols=42 Identities=19% Similarity=0.153 Sum_probs=21.1
Q ss_pred HHHHHHhhcCCcchhHHHHHHHHHhhHHHHHHHHHHHHhHhhh
Q 020432 180 FCGAGILILPMNMSAFMYVLAIFVGIANALMMVTGISMQNVLV 222 (326)
Q Consensus 180 ~~~~~l~~~~~~~~~~~l~~~~~~g~g~~~~~~~~~am~aD~i 222 (326)
+.++.+.... +.+...+...+=.|+-++.+..++|+=.+--+
T Consensus 305 ~TGl~l~~~R-~t~~m~~ll~lHLg~V~~lF~~lPysKfaH~~ 346 (372)
T TIGR02484 305 GTGLALLALR-DTPAMGLLLALHLGAVAGAFLGLPFSKLSHGG 346 (372)
T ss_pred HHHHHHHHHc-CcHHHHHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence 3445444444 44444443334345555566667776554433
No 290
>COG0679 Predicted permeases [General function prediction only]
Probab=20.16 E-value=2.6e+02 Score=25.61 Aligned_cols=22 Identities=9% Similarity=-0.087 Sum_probs=16.3
Q ss_pred chhhhHHHHhhchhHHHHHHHH
Q 020432 89 HARISWAYWFKKILYYQVALVY 110 (326)
Q Consensus 89 ~~~~~l~~~~~N~~~~~~~~~~ 110 (326)
..++.+|..++||+.+...+..
T Consensus 157 ~~~~~~~~~~~nP~i~a~i~g~ 178 (311)
T COG0679 157 SLLSVLKKLLTNPLIIALILGL 178 (311)
T ss_pred HHHHHHHHHHhCcHHHHHHHHH
Confidence 4566889999999988655433
Done!