Query 020435
Match_columns 326
No_of_seqs 120 out of 1599
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 09:43:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020435.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020435hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1062 AdhC Zn-dependent alco 100.0 4.1E-56 8.9E-61 385.0 27.7 317 1-324 49-366 (366)
2 KOG0022 Alcohol dehydrogenase, 100.0 2.5E-54 5.5E-59 368.0 27.8 321 1-324 54-375 (375)
3 COG1064 AdhP Zn-dependent alco 100.0 4.9E-54 1.1E-58 379.9 28.0 287 1-325 50-338 (339)
4 KOG0024 Sorbitol dehydrogenase 100.0 5.1E-51 1.1E-55 350.3 26.0 290 7-326 60-354 (354)
5 KOG0023 Alcohol dehydrogenase, 100.0 1.7E-47 3.6E-52 327.9 25.1 293 1-325 58-355 (360)
6 cd08281 liver_ADH_like1 Zinc-d 100.0 1.3E-45 2.8E-50 341.7 31.7 312 6-322 59-370 (371)
7 cd08300 alcohol_DH_class_III c 100.0 2.2E-44 4.7E-49 333.2 32.4 319 2-323 50-368 (368)
8 TIGR02818 adh_III_F_hyde S-(hy 100.0 1.7E-44 3.7E-49 333.8 31.4 319 2-324 49-368 (368)
9 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.7E-44 3.8E-49 332.7 30.5 304 6-323 52-357 (358)
10 PLN02740 Alcohol dehydrogenase 100.0 2.7E-44 5.9E-49 333.9 30.3 314 6-324 63-381 (381)
11 cd08239 THR_DH_like L-threonin 100.0 3.4E-44 7.3E-49 328.4 30.1 285 7-324 53-339 (339)
12 cd08301 alcohol_DH_plants Plan 100.0 7.3E-44 1.6E-48 329.9 32.3 316 3-322 51-368 (369)
13 COG1063 Tdh Threonine dehydrog 100.0 3.3E-43 7.2E-48 321.6 30.5 294 3-324 49-350 (350)
14 PRK09880 L-idonate 5-dehydroge 100.0 2.6E-43 5.5E-48 323.1 29.5 281 6-324 57-343 (343)
15 PLN02827 Alcohol dehydrogenase 100.0 1.8E-42 4E-47 321.0 30.8 314 7-325 62-377 (378)
16 cd08277 liver_alcohol_DH_like 100.0 7.1E-42 1.5E-46 316.1 30.7 312 6-323 53-365 (365)
17 TIGR03366 HpnZ_proposed putati 100.0 1.7E-42 3.6E-47 308.9 24.5 270 11-305 1-280 (280)
18 PRK10309 galactitol-1-phosphat 100.0 8.8E-42 1.9E-46 313.5 30.0 289 7-324 52-346 (347)
19 PLN02586 probable cinnamyl alc 100.0 8.2E-42 1.8E-46 314.7 29.6 286 3-324 61-353 (360)
20 TIGR03201 dearomat_had 6-hydro 100.0 1.4E-41 3E-46 312.3 30.4 287 6-324 51-349 (349)
21 PLN02178 cinnamyl-alcohol dehy 100.0 2.4E-41 5.1E-46 312.8 29.8 285 4-324 56-348 (375)
22 TIGR02819 fdhA_non_GSH formald 100.0 2.5E-41 5.4E-46 314.2 30.0 296 7-325 60-391 (393)
23 cd08231 MDR_TM0436_like Hypoth 100.0 1.4E-40 3.1E-45 307.0 31.1 300 6-324 52-361 (361)
24 TIGR02822 adh_fam_2 zinc-bindi 100.0 1.2E-40 2.7E-45 303.4 28.1 277 2-322 50-328 (329)
25 cd05279 Zn_ADH1 Liver alcohol 100.0 4.4E-40 9.5E-45 304.1 31.7 312 6-323 51-365 (365)
26 COG0604 Qor NADPH:quinone redu 100.0 5.4E-41 1.2E-45 303.3 24.9 267 4-324 53-326 (326)
27 KOG1197 Predicted quinone oxid 100.0 6.1E-41 1.3E-45 278.0 19.6 267 1-325 57-331 (336)
28 cd08233 butanediol_DH_like (2R 100.0 2.2E-39 4.7E-44 298.0 30.5 283 7-322 63-350 (351)
29 cd08230 glucose_DH Glucose deh 100.0 2.4E-39 5.3E-44 298.2 28.9 282 7-324 56-355 (355)
30 PLN02514 cinnamyl-alcohol dehy 100.0 1.1E-38 2.3E-43 293.9 30.2 286 4-325 59-351 (357)
31 cd08299 alcohol_DH_class_I_II_ 100.0 2.6E-38 5.6E-43 292.9 32.5 315 6-324 58-373 (373)
32 cd08278 benzyl_alcohol_DH Benz 100.0 3.6E-38 7.9E-43 291.3 31.6 312 6-323 53-365 (365)
33 cd08285 NADP_ADH NADP(H)-depen 100.0 1.3E-37 2.9E-42 286.2 31.2 295 4-324 49-351 (351)
34 PRK10083 putative oxidoreducta 100.0 2.9E-37 6.3E-42 282.5 30.1 289 2-326 47-339 (339)
35 cd08279 Zn_ADH_class_III Class 100.0 1.1E-36 2.5E-41 281.2 32.8 311 6-322 51-362 (363)
36 cd08296 CAD_like Cinnamyl alco 100.0 5E-37 1.1E-41 280.4 29.5 283 3-323 49-333 (333)
37 cd08237 ribitol-5-phosphate_DH 100.0 1.2E-37 2.6E-42 285.2 24.3 272 6-325 56-340 (341)
38 cd05284 arabinose_DH_like D-ar 100.0 8.5E-37 1.8E-41 279.5 29.5 283 5-324 54-340 (340)
39 cd08283 FDH_like_1 Glutathione 100.0 2E-36 4.3E-41 281.7 31.2 307 2-324 48-386 (386)
40 cd08238 sorbose_phosphate_red 100.0 2.8E-36 6E-41 282.7 29.3 279 7-325 61-369 (410)
41 cd05278 FDH_like Formaldehyde 100.0 3.8E-36 8.2E-41 275.9 29.3 295 2-324 48-347 (347)
42 cd08286 FDH_like_ADH2 formalde 100.0 8E-36 1.7E-40 273.7 30.2 291 3-324 49-345 (345)
43 cd08246 crotonyl_coA_red croto 100.0 5.3E-36 1.2E-40 279.6 29.2 283 9-322 82-391 (393)
44 cd08260 Zn_ADH6 Alcohol dehydr 100.0 2E-35 4.4E-40 271.0 31.0 291 4-323 50-344 (345)
45 cd08265 Zn_ADH3 Alcohol dehydr 100.0 1.5E-35 3.2E-40 275.6 29.7 289 6-322 85-383 (384)
46 cd08261 Zn_ADH7 Alcohol dehydr 100.0 4.9E-35 1.1E-39 267.6 30.8 286 4-324 49-337 (337)
47 cd08235 iditol_2_DH_like L-idi 100.0 3.9E-35 8.4E-40 268.9 29.8 287 6-323 51-343 (343)
48 cd08256 Zn_ADH2 Alcohol dehydr 100.0 3.2E-35 6.9E-40 270.3 28.9 282 7-322 61-350 (350)
49 cd05285 sorbitol_DH Sorbitol d 100.0 6E-35 1.3E-39 267.7 29.5 282 7-322 53-341 (343)
50 PRK05396 tdh L-threonine 3-deh 100.0 8.3E-35 1.8E-39 266.6 29.7 285 7-325 56-341 (341)
51 cd08263 Zn_ADH10 Alcohol dehyd 100.0 7.9E-35 1.7E-39 269.3 29.7 308 7-322 52-366 (367)
52 TIGR01751 crot-CoA-red crotony 100.0 8.4E-35 1.8E-39 271.9 29.6 285 10-325 79-388 (398)
53 cd08240 6_hydroxyhexanoate_dh_ 100.0 1E-34 2.3E-39 266.8 29.6 285 7-324 65-350 (350)
54 PLN03154 putative allyl alcoho 100.0 4.4E-35 9.5E-40 268.8 26.9 260 7-325 71-346 (348)
55 cd08287 FDH_like_ADH3 formalde 100.0 1.7E-34 3.7E-39 264.8 30.0 286 7-324 52-345 (345)
56 cd08284 FDH_like_2 Glutathione 100.0 1.9E-34 4.1E-39 264.4 29.7 289 7-323 52-343 (344)
57 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 2.1E-34 4.6E-39 263.1 30.0 283 6-324 54-338 (338)
58 PLN02702 L-idonate 5-dehydroge 100.0 2.5E-34 5.5E-39 265.7 30.6 285 7-323 72-363 (364)
59 TIGR01202 bchC 2-desacetyl-2-h 100.0 3.3E-35 7.2E-40 265.3 23.9 251 7-323 57-308 (308)
60 cd05283 CAD1 Cinnamyl alcohol 100.0 2.1E-34 4.5E-39 263.5 27.6 287 4-323 49-337 (337)
61 cd08232 idonate-5-DH L-idonate 100.0 3.1E-34 6.8E-39 262.5 28.5 280 7-324 52-339 (339)
62 cd08282 PFDH_like Pseudomonas 100.0 7.1E-34 1.5E-38 263.6 30.5 293 7-324 52-375 (375)
63 PRK09422 ethanol-active dehydr 100.0 1.1E-33 2.3E-38 258.8 29.9 282 8-325 53-337 (338)
64 PRK13771 putative alcohol dehy 100.0 6.7E-34 1.5E-38 259.7 27.6 283 3-324 49-333 (334)
65 cd08297 CAD3 Cinnamyl alcohol 100.0 1.6E-33 3.6E-38 257.9 30.0 283 7-324 55-341 (341)
66 cd08291 ETR_like_1 2-enoyl thi 100.0 6.1E-34 1.3E-38 259.0 26.5 259 6-323 58-324 (324)
67 cd08266 Zn_ADH_like1 Alcohol d 100.0 1.9E-33 4E-38 256.7 28.7 285 6-324 55-342 (342)
68 cd08242 MDR_like Medium chain 100.0 2.1E-33 4.5E-38 254.9 28.2 268 8-324 50-319 (319)
69 TIGR00692 tdh L-threonine 3-de 100.0 2.7E-33 5.8E-38 256.5 29.0 285 7-324 54-340 (340)
70 cd05281 TDH Threonine dehydrog 100.0 2.8E-33 6.1E-38 256.5 28.8 284 7-324 56-341 (341)
71 cd08236 sugar_DH NAD(P)-depend 100.0 4.8E-33 1E-37 255.0 29.1 287 7-322 51-343 (343)
72 cd08262 Zn_ADH8 Alcohol dehydr 100.0 5.1E-33 1.1E-37 254.6 28.6 274 7-323 62-341 (341)
73 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.4E-33 5.2E-38 255.1 25.5 268 7-318 53-321 (325)
74 cd08234 threonine_DH_like L-th 100.0 1E-32 2.2E-37 251.8 29.5 281 7-322 51-333 (334)
75 cd08292 ETR_like_2 2-enoyl thi 100.0 4.5E-33 9.7E-38 253.0 26.7 258 6-322 56-323 (324)
76 cd08274 MDR9 Medium chain dehy 100.0 5.2E-33 1.1E-37 255.4 27.4 273 6-324 75-350 (350)
77 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.3E-32 2.9E-37 250.5 28.9 282 3-323 49-332 (332)
78 cd08293 PTGR2 Prostaglandin re 100.0 8.5E-33 1.8E-37 253.6 27.5 261 6-324 66-345 (345)
79 KOG0025 Zn2+-binding dehydroge 100.0 5.1E-33 1.1E-37 234.9 23.3 268 1-325 69-353 (354)
80 TIGR02825 B4_12hDH leukotriene 100.0 5.4E-33 1.2E-37 252.9 25.4 258 4-323 53-325 (325)
81 cd08245 CAD Cinnamyl alcohol d 100.0 3E-32 6.6E-37 248.4 28.1 280 4-322 49-330 (330)
82 cd08298 CAD2 Cinnamyl alcohol 100.0 2.3E-32 5.1E-37 249.0 27.3 276 2-322 52-329 (329)
83 cd08295 double_bond_reductase_ 100.0 2.3E-32 5.1E-37 250.1 26.4 259 7-324 66-338 (338)
84 cd08258 Zn_ADH4 Alcohol dehydr 100.0 7.4E-32 1.6E-36 243.4 26.8 250 6-288 53-306 (306)
85 cd08294 leukotriene_B4_DH_like 100.0 1.4E-31 3.1E-36 243.7 25.3 255 7-324 58-329 (329)
86 cd08244 MDR_enoyl_red Possible 100.0 1.2E-30 2.6E-35 237.0 27.4 262 6-324 57-324 (324)
87 cd08276 MDR7 Medium chain dehy 100.0 4.4E-30 9.6E-35 234.2 29.5 278 7-323 56-335 (336)
88 PTZ00354 alcohol dehydrogenase 100.0 1.6E-30 3.5E-35 237.0 26.3 263 6-325 56-329 (334)
89 cd05188 MDR Medium chain reduc 100.0 1.4E-30 3E-35 230.0 25.0 243 6-284 27-270 (271)
90 TIGR02817 adh_fam_1 zinc-bindi 100.0 2.2E-30 4.8E-35 236.6 27.0 261 4-323 54-334 (336)
91 cd05282 ETR_like 2-enoyl thioe 100.0 2.4E-30 5.2E-35 234.9 25.2 260 6-323 54-323 (323)
92 cd08269 Zn_ADH9 Alcohol dehydr 100.0 7.9E-30 1.7E-34 230.4 27.7 256 8-322 51-311 (312)
93 cd08290 ETR 2-enoyl thioester 100.0 4E-30 8.7E-35 235.4 25.4 260 8-324 63-341 (341)
94 PRK10754 quinone oxidoreductas 100.0 2.4E-30 5.3E-35 235.5 23.2 268 2-324 51-327 (327)
95 KOG1198 Zinc-binding oxidoredu 100.0 3.1E-30 6.7E-35 233.5 20.3 225 92-325 104-346 (347)
96 COG2130 Putative NADP-dependen 100.0 2.4E-29 5.1E-34 214.8 23.6 263 4-326 63-340 (340)
97 cd08243 quinone_oxidoreductase 100.0 3.8E-29 8.2E-34 226.4 26.1 263 4-322 52-319 (320)
98 cd08255 2-desacetyl-2-hydroxye 100.0 8.8E-29 1.9E-33 220.1 24.9 250 2-322 15-277 (277)
99 cd08250 Mgc45594_like Mgc45594 100.0 1E-28 2.2E-33 224.9 25.6 258 6-322 58-328 (329)
100 cd08270 MDR4 Medium chain dehy 100.0 7.2E-29 1.6E-33 223.5 23.3 250 8-324 51-305 (305)
101 cd08289 MDR_yhfp_like Yhfp put 100.0 1.5E-28 3.3E-33 223.5 25.6 263 7-324 56-326 (326)
102 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 2.5E-28 5.3E-33 221.9 26.4 261 7-324 56-325 (325)
103 cd05286 QOR2 Quinone oxidoredu 100.0 3.8E-28 8.1E-33 219.2 27.0 260 7-324 53-320 (320)
104 cd08249 enoyl_reductase_like e 100.0 4.1E-28 8.9E-33 222.1 25.8 261 7-324 53-339 (339)
105 TIGR02823 oxido_YhdH putative 100.0 1E-27 2.2E-32 217.9 27.6 261 6-323 54-322 (323)
106 cd08252 AL_MDR Arginate lyase 100.0 1.1E-27 2.5E-32 218.6 27.2 261 6-322 57-335 (336)
107 cd08251 polyketide_synthase po 100.0 1.2E-27 2.5E-32 214.8 25.6 259 7-322 36-303 (303)
108 cd05276 p53_inducible_oxidored 100.0 1.3E-27 2.8E-32 216.0 25.5 259 6-322 55-323 (323)
109 cd08253 zeta_crystallin Zeta-c 100.0 2.8E-27 6E-32 214.2 26.3 265 6-324 55-325 (325)
110 cd05288 PGDH Prostaglandin deh 100.0 1.1E-27 2.4E-32 218.1 23.9 253 8-322 64-329 (329)
111 TIGR02824 quinone_pig3 putativ 100.0 2E-27 4.4E-32 215.2 25.1 259 7-323 56-324 (325)
112 cd08268 MDR2 Medium chain dehy 100.0 5.2E-27 1.1E-31 212.8 26.3 264 7-323 56-327 (328)
113 smart00829 PKS_ER Enoylreducta 100.0 4.2E-27 9.1E-32 209.2 24.0 255 8-321 23-287 (288)
114 cd08248 RTN4I1 Human Reticulon 100.0 3E-27 6.6E-32 217.1 22.5 258 6-322 71-349 (350)
115 cd08271 MDR5 Medium chain dehy 100.0 1.6E-26 3.4E-31 209.7 24.4 260 8-324 56-325 (325)
116 cd05195 enoyl_red enoyl reduct 100.0 1.9E-26 4E-31 205.2 24.1 256 7-321 26-292 (293)
117 cd08272 MDR6 Medium chain dehy 100.0 1.9E-26 4.1E-31 209.1 24.3 258 7-324 56-326 (326)
118 cd08247 AST1_like AST1 is a cy 100.0 3.1E-26 6.7E-31 210.7 25.2 263 8-323 58-351 (352)
119 cd08288 MDR_yhdh Yhdh putative 100.0 8.9E-26 1.9E-30 205.1 27.5 261 7-324 56-324 (324)
120 cd08273 MDR8 Medium chain dehy 100.0 2.1E-26 4.5E-31 209.8 22.3 255 7-322 56-330 (331)
121 KOG1202 Animal-type fatty acid 99.9 2E-27 4.4E-32 229.9 15.4 226 93-325 1506-1742(2376)
122 cd08241 QOR1 Quinone oxidoredu 99.9 1.1E-25 2.4E-30 203.5 25.2 258 7-322 56-322 (323)
123 cd08275 MDR3 Medium chain dehy 99.9 1.9E-25 4.2E-30 203.6 26.3 260 7-324 55-337 (337)
124 cd08267 MDR1 Medium chain dehy 99.9 1.2E-25 2.7E-30 203.3 23.3 255 7-321 57-318 (319)
125 cd05289 MDR_like_2 alcohol deh 99.9 2.6E-25 5.6E-30 199.9 22.8 250 5-321 56-308 (309)
126 KOG1196 Predicted NAD-dependen 99.9 2.8E-24 6E-29 183.2 20.8 250 15-325 78-341 (343)
127 PF00107 ADH_zinc_N: Zinc-bind 99.8 3.9E-18 8.6E-23 134.2 13.2 129 150-287 1-130 (130)
128 PF08240 ADH_N: Alcohol dehydr 99.7 1.6E-17 3.5E-22 126.6 5.5 84 3-108 26-109 (109)
129 cd00401 AdoHcyase S-adenosyl-L 99.5 5.8E-13 1.3E-17 122.9 14.3 176 128-325 189-377 (413)
130 PRK09424 pntA NAD(P) transhydr 99.4 1.5E-11 3.3E-16 116.4 14.3 155 137-297 162-339 (509)
131 PF13602 ADH_zinc_N_2: Zinc-bi 99.3 2.1E-12 4.7E-17 101.0 2.7 120 183-322 1-127 (127)
132 PRK11873 arsM arsenite S-adeno 98.7 1.8E-07 3.9E-12 83.0 10.4 163 134-312 72-246 (272)
133 TIGR00561 pntA NAD(P) transhyd 98.5 7.8E-07 1.7E-11 84.4 11.5 108 138-247 162-289 (511)
134 TIGR01035 hemA glutamyl-tRNA r 98.3 2.1E-08 4.6E-13 94.0 -4.0 156 11-222 89-252 (417)
135 PRK08306 dipicolinate synthase 98.2 2.4E-05 5.1E-10 70.2 12.0 96 139-247 151-246 (296)
136 PRK00517 prmA ribosomal protei 98.2 4.2E-05 9.2E-10 66.9 13.4 131 93-244 78-215 (250)
137 PRK05476 S-adenosyl-L-homocyst 98.2 2.6E-05 5.7E-10 72.7 12.2 101 128-244 199-301 (425)
138 cd05213 NAD_bind_Glutamyl_tRNA 98.1 7.5E-06 1.6E-10 74.0 8.1 107 104-223 140-251 (311)
139 TIGR00936 ahcY adenosylhomocys 98.1 5E-05 1.1E-09 70.5 12.6 100 129-244 183-284 (406)
140 COG2518 Pcm Protein-L-isoaspar 98.0 3.3E-05 7.1E-10 64.5 9.2 119 112-243 47-170 (209)
141 PLN02494 adenosylhomocysteinas 98.0 0.0001 2.2E-09 69.2 11.6 101 128-244 241-343 (477)
142 PRK08324 short chain dehydroge 97.9 0.00011 2.4E-09 73.6 12.7 137 93-244 386-559 (681)
143 TIGR02853 spore_dpaA dipicolin 97.9 0.00013 2.9E-09 65.0 10.9 94 139-245 150-243 (287)
144 PF11017 DUF2855: Protein of u 97.8 0.0011 2.3E-08 59.2 15.2 139 93-245 90-234 (314)
145 TIGR00518 alaDH alanine dehydr 97.8 0.00031 6.8E-09 65.0 11.3 99 139-246 166-271 (370)
146 PTZ00075 Adenosylhomocysteinas 97.7 0.00043 9.4E-09 65.2 11.0 98 131-244 244-343 (476)
147 PRK00045 hemA glutamyl-tRNA re 97.6 9.3E-05 2E-09 69.8 5.8 160 11-222 91-254 (423)
148 PRK12771 putative glutamate sy 97.6 5.2E-05 1.1E-09 74.4 4.2 80 136-222 133-234 (564)
149 PF01488 Shikimate_DH: Shikima 97.6 0.00028 6E-09 55.6 7.4 74 139-222 11-87 (135)
150 COG4221 Short-chain alcohol de 97.6 0.00045 9.7E-09 58.9 8.7 79 139-220 5-91 (246)
151 TIGR00406 prmA ribosomal prote 97.6 0.0005 1.1E-08 61.5 9.4 97 137-244 157-261 (288)
152 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.0018 3.8E-08 55.8 12.3 104 139-244 4-137 (238)
153 COG3967 DltE Short-chain dehyd 97.4 0.00083 1.8E-08 55.6 8.1 78 139-220 4-88 (245)
154 COG2242 CobL Precorrin-6B meth 97.4 0.0018 3.9E-08 53.1 10.0 105 132-244 27-137 (187)
155 PRK11705 cyclopropane fatty ac 97.4 0.0014 3.1E-08 60.9 10.4 110 123-243 151-268 (383)
156 PRK00377 cbiT cobalt-precorrin 97.3 0.003 6.6E-08 53.1 10.8 103 132-241 33-144 (198)
157 PRK13943 protein-L-isoaspartat 97.3 0.0046 9.9E-08 56.0 12.4 103 131-241 72-179 (322)
158 PF02826 2-Hacid_dh_C: D-isome 97.3 0.002 4.3E-08 53.3 9.1 89 139-243 35-128 (178)
159 COG0300 DltE Short-chain dehyd 97.2 0.0026 5.7E-08 55.6 9.2 81 138-220 4-94 (265)
160 PRK05693 short chain dehydroge 97.2 0.0023 4.9E-08 56.6 9.1 77 141-220 2-82 (274)
161 PF01135 PCMT: Protein-L-isoas 97.2 0.00097 2.1E-08 56.5 6.2 109 120-241 55-171 (209)
162 PRK05993 short chain dehydroge 97.1 0.0044 9.5E-08 54.9 10.4 78 139-219 3-85 (277)
163 COG1748 LYS9 Saccharopine dehy 97.1 0.007 1.5E-07 55.8 11.6 96 141-244 2-101 (389)
164 PRK13944 protein-L-isoaspartat 97.1 0.0047 1E-07 52.3 9.7 101 131-241 64-172 (205)
165 PF13460 NAD_binding_10: NADH( 97.1 0.015 3.2E-07 47.9 12.3 93 143-244 1-99 (183)
166 COG2230 Cfa Cyclopropane fatty 97.0 0.0029 6.4E-08 55.6 8.1 107 127-247 60-181 (283)
167 TIGR00438 rrmJ cell division p 97.0 0.01 2.2E-07 49.4 11.1 100 134-242 27-146 (188)
168 PRK00536 speE spermidine synth 97.0 0.003 6.4E-08 55.3 8.0 99 138-243 71-172 (262)
169 PF12847 Methyltransf_18: Meth 97.0 0.0028 6E-08 47.8 6.9 94 139-241 1-110 (112)
170 PRK06182 short chain dehydroge 97.0 0.0044 9.6E-08 54.7 9.1 79 139-220 2-84 (273)
171 PLN03209 translocon at the inn 97.0 0.017 3.6E-07 56.1 13.1 105 134-244 74-209 (576)
172 PRK08177 short chain dehydroge 97.0 0.0058 1.3E-07 52.3 9.2 77 141-220 2-81 (225)
173 PRK13942 protein-L-isoaspartat 96.9 0.0024 5.1E-08 54.5 6.6 100 131-241 68-175 (212)
174 PRK12742 oxidoreductase; Provi 96.9 0.024 5.2E-07 48.7 12.9 100 139-244 5-133 (237)
175 KOG1209 1-Acyl dihydroxyaceton 96.9 0.016 3.5E-07 48.5 10.8 104 139-246 6-142 (289)
176 TIGR02469 CbiT precorrin-6Y C5 96.9 0.019 4.1E-07 43.8 10.9 102 131-241 11-121 (124)
177 PRK06139 short chain dehydroge 96.9 0.0058 1.3E-07 55.8 8.9 79 139-220 6-94 (330)
178 PRK06949 short chain dehydroge 96.9 0.0067 1.5E-07 52.9 9.0 81 139-220 8-96 (258)
179 PRK08265 short chain dehydroge 96.9 0.017 3.7E-07 50.7 11.6 79 139-220 5-90 (261)
180 PRK07326 short chain dehydroge 96.9 0.02 4.3E-07 49.2 11.9 81 139-220 5-92 (237)
181 PRK08017 oxidoreductase; Provi 96.9 0.0049 1.1E-07 53.7 8.1 77 141-220 3-84 (256)
182 PRK07109 short chain dehydroge 96.8 0.028 6.1E-07 51.3 13.1 79 139-220 7-95 (334)
183 PRK07806 short chain dehydroge 96.8 0.024 5.2E-07 49.1 11.9 101 139-243 5-135 (248)
184 PRK06057 short chain dehydroge 96.8 0.0076 1.7E-07 52.6 8.7 79 139-220 6-89 (255)
185 PRK07060 short chain dehydroge 96.8 0.011 2.4E-07 51.0 9.7 77 139-220 8-87 (245)
186 KOG1205 Predicted dehydrogenas 96.7 0.033 7.1E-07 49.2 12.2 110 139-251 11-158 (282)
187 PLN02366 spermidine synthase 96.7 0.02 4.4E-07 51.5 11.2 99 137-243 89-207 (308)
188 COG4122 Predicted O-methyltran 96.7 0.025 5.5E-07 48.0 11.0 107 134-244 54-168 (219)
189 PF02353 CMAS: Mycolic acid cy 96.7 0.0036 7.9E-08 55.4 6.2 99 131-243 54-167 (273)
190 cd01080 NAD_bind_m-THF_DH_Cycl 96.7 0.017 3.7E-07 47.2 9.7 97 117-244 21-118 (168)
191 PRK03369 murD UDP-N-acetylmura 96.7 0.009 1.9E-07 57.6 9.3 74 137-222 9-82 (488)
192 COG2226 UbiE Methylase involve 96.7 0.027 5.8E-07 48.6 11.2 107 133-247 45-161 (238)
193 PRK12939 short chain dehydroge 96.7 0.034 7.5E-07 48.0 12.2 79 139-220 6-94 (250)
194 PRK14967 putative methyltransf 96.7 0.12 2.6E-06 44.2 15.2 98 133-242 30-159 (223)
195 COG2519 GCD14 tRNA(1-methylade 96.7 0.015 3.3E-07 50.0 9.3 105 131-244 86-197 (256)
196 PRK12829 short chain dehydroge 96.7 0.0087 1.9E-07 52.3 8.3 81 138-221 9-97 (264)
197 TIGR00080 pimt protein-L-isoas 96.7 0.0052 1.1E-07 52.4 6.6 100 131-241 69-176 (215)
198 PRK05866 short chain dehydroge 96.7 0.013 2.7E-07 52.6 9.4 81 139-220 39-127 (293)
199 PRK05872 short chain dehydroge 96.7 0.011 2.4E-07 53.0 9.0 79 139-220 8-95 (296)
200 PRK07825 short chain dehydroge 96.6 0.012 2.6E-07 51.9 9.1 78 140-220 5-88 (273)
201 PRK06200 2,3-dihydroxy-2,3-dih 96.6 0.012 2.6E-07 51.6 9.0 79 139-220 5-90 (263)
202 PRK07402 precorrin-6B methylas 96.6 0.059 1.3E-06 45.2 12.7 103 131-243 32-143 (196)
203 PRK07814 short chain dehydroge 96.6 0.013 2.8E-07 51.4 8.9 79 139-220 9-97 (263)
204 PRK00811 spermidine synthase; 96.6 0.015 3.3E-07 51.8 9.4 96 138-242 75-191 (283)
205 PRK00107 gidB 16S rRNA methylt 96.6 0.037 8.1E-07 46.1 11.0 96 137-242 43-145 (187)
206 TIGR03325 BphB_TodD cis-2,3-di 96.6 0.014 3E-07 51.2 8.9 78 139-219 4-88 (262)
207 PRK06841 short chain dehydroge 96.6 0.013 2.7E-07 51.1 8.5 81 139-220 14-99 (255)
208 PRK13940 glutamyl-tRNA reducta 96.6 0.013 2.9E-07 54.9 9.1 75 138-222 179-254 (414)
209 PRK07904 short chain dehydroge 96.6 0.02 4.3E-07 50.1 9.7 83 137-220 5-97 (253)
210 COG0686 Ald Alanine dehydrogen 96.6 0.014 3E-07 51.6 8.4 98 139-246 167-272 (371)
211 TIGR01832 kduD 2-deoxy-D-gluco 96.5 0.019 4.1E-07 49.7 9.5 81 139-220 4-90 (248)
212 PRK05867 short chain dehydroge 96.5 0.015 3.2E-07 50.7 8.8 79 139-220 8-96 (253)
213 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.035 7.6E-07 52.9 12.0 79 139-220 209-294 (450)
214 PRK07231 fabG 3-ketoacyl-(acyl 96.5 0.015 3.3E-07 50.3 8.8 81 139-220 4-91 (251)
215 PRK09291 short chain dehydroge 96.5 0.018 4E-07 50.1 9.3 73 140-219 2-82 (257)
216 PRK07831 short chain dehydroge 96.5 0.017 3.6E-07 50.6 9.0 81 137-220 14-107 (262)
217 PF01262 AlaDh_PNT_C: Alanine 96.5 0.01 2.2E-07 48.6 7.1 103 139-244 19-141 (168)
218 PRK06180 short chain dehydroge 96.5 0.016 3.5E-07 51.2 9.0 79 139-220 3-88 (277)
219 PRK06196 oxidoreductase; Provi 96.4 0.02 4.3E-07 51.8 9.3 79 139-220 25-109 (315)
220 PRK11207 tellurite resistance 96.4 0.014 3E-07 49.1 7.7 99 132-242 23-134 (197)
221 PRK07062 short chain dehydroge 96.4 0.018 3.9E-07 50.5 8.7 79 139-220 7-97 (265)
222 PRK06505 enoyl-(acyl carrier p 96.4 0.019 4E-07 50.9 8.8 79 139-220 6-95 (271)
223 PRK12828 short chain dehydroge 96.4 0.019 4.2E-07 49.2 8.7 79 139-220 6-92 (239)
224 PRK08339 short chain dehydroge 96.4 0.025 5.3E-07 49.8 9.5 79 139-220 7-95 (263)
225 PRK07677 short chain dehydroge 96.4 0.018 3.8E-07 50.2 8.5 80 140-220 1-88 (252)
226 PRK06500 short chain dehydroge 96.4 0.023 5E-07 49.1 9.2 79 139-220 5-90 (249)
227 PRK07832 short chain dehydroge 96.4 0.071 1.5E-06 47.0 12.5 76 142-220 2-88 (272)
228 PF06325 PrmA: Ribosomal prote 96.4 0.017 3.7E-07 51.5 8.3 96 137-245 159-262 (295)
229 PRK07478 short chain dehydroge 96.4 0.022 4.8E-07 49.6 9.0 79 139-220 5-93 (254)
230 PRK07502 cyclohexadienyl dehyd 96.4 0.032 7E-07 50.3 10.2 91 141-243 7-101 (307)
231 PRK04148 hypothetical protein; 96.4 0.072 1.6E-06 41.6 10.6 89 136-234 13-101 (134)
232 PRK06953 short chain dehydroge 96.3 0.031 6.8E-07 47.6 9.6 77 141-220 2-80 (222)
233 PLN02780 ketoreductase/ oxidor 96.3 0.022 4.8E-07 51.7 9.0 80 139-220 52-142 (320)
234 PRK07576 short chain dehydroge 96.3 0.027 5.9E-07 49.5 9.1 78 139-219 8-95 (264)
235 PF00670 AdoHcyase_NAD: S-aden 96.3 0.036 7.8E-07 44.7 8.8 102 137-258 20-122 (162)
236 PF03446 NAD_binding_2: NAD bi 96.3 0.09 1.9E-06 42.7 11.4 89 141-244 2-96 (163)
237 PRK08340 glucose-1-dehydrogena 96.3 0.028 6.1E-07 49.2 9.1 78 142-220 2-86 (259)
238 PRK08217 fabG 3-ketoacyl-(acyl 96.3 0.031 6.8E-07 48.3 9.4 80 139-219 4-91 (253)
239 CHL00194 ycf39 Ycf39; Provisio 96.3 0.079 1.7E-06 48.0 12.2 94 142-244 2-111 (317)
240 COG2264 PrmA Ribosomal protein 96.3 0.09 2E-06 46.8 12.0 138 93-244 120-265 (300)
241 PLN02781 Probable caffeoyl-CoA 96.3 0.044 9.5E-07 47.4 10.0 105 132-241 61-177 (234)
242 PRK06128 oxidoreductase; Provi 96.3 0.07 1.5E-06 47.9 11.7 102 139-244 54-193 (300)
243 TIGR02356 adenyl_thiF thiazole 96.3 0.051 1.1E-06 45.9 10.1 35 139-173 20-54 (202)
244 cd01075 NAD_bind_Leu_Phe_Val_D 96.3 0.11 2.3E-06 43.8 12.0 81 139-233 27-108 (200)
245 PRK07533 enoyl-(acyl carrier p 96.2 0.028 6.1E-07 49.2 8.9 80 139-219 9-97 (258)
246 PF03435 Saccharop_dh: Sacchar 96.2 0.052 1.1E-06 50.6 11.2 91 143-241 1-97 (386)
247 PRK05717 oxidoreductase; Valid 96.2 0.03 6.6E-07 48.8 9.0 79 139-220 9-94 (255)
248 PF00106 adh_short: short chai 96.2 0.1 2.2E-06 42.1 11.5 80 141-220 1-90 (167)
249 PRK06484 short chain dehydroge 96.2 0.089 1.9E-06 51.1 13.1 102 139-244 268-402 (520)
250 PRK07454 short chain dehydroge 96.2 0.037 8.1E-07 47.7 9.5 79 139-220 5-93 (241)
251 PRK07523 gluconate 5-dehydroge 96.2 0.032 6.9E-07 48.6 9.0 79 139-220 9-97 (255)
252 PRK01581 speE spermidine synth 96.2 0.1 2.3E-06 47.7 12.4 104 137-243 148-269 (374)
253 PF13241 NAD_binding_7: Putati 96.2 0.061 1.3E-06 40.0 9.3 88 139-244 6-93 (103)
254 PRK09072 short chain dehydroge 96.2 0.039 8.5E-07 48.3 9.6 81 139-220 4-90 (263)
255 PRK05875 short chain dehydroge 96.2 0.033 7.1E-07 49.2 9.1 78 139-219 6-95 (276)
256 PRK08213 gluconate 5-dehydroge 96.2 0.035 7.6E-07 48.5 9.2 79 139-220 11-99 (259)
257 PRK06172 short chain dehydroge 96.2 0.032 7E-07 48.5 8.9 81 139-220 6-94 (253)
258 PRK07063 short chain dehydroge 96.2 0.033 7.1E-07 48.7 9.0 79 139-220 6-96 (260)
259 PRK07890 short chain dehydroge 96.2 0.033 7.2E-07 48.5 9.0 79 139-220 4-92 (258)
260 PLN02476 O-methyltransferase 96.2 0.05 1.1E-06 48.1 9.9 105 133-242 112-228 (278)
261 PRK06181 short chain dehydroge 96.2 0.037 8.1E-07 48.4 9.3 79 141-220 2-88 (263)
262 PRK08643 acetoin reductase; Va 96.2 0.033 7.2E-07 48.5 8.9 78 140-220 2-89 (256)
263 PRK06138 short chain dehydroge 96.1 0.035 7.6E-07 48.1 9.0 81 139-220 4-91 (252)
264 TIGR03206 benzo_BadH 2-hydroxy 96.1 0.036 7.8E-07 48.0 9.0 80 139-219 2-89 (250)
265 PRK13394 3-hydroxybutyrate deh 96.1 0.039 8.5E-07 48.1 9.3 80 139-220 6-94 (262)
266 PRK06194 hypothetical protein; 96.1 0.038 8.2E-07 49.1 9.2 80 140-220 6-93 (287)
267 PRK06179 short chain dehydroge 96.1 0.018 3.9E-07 50.6 7.0 76 140-220 4-83 (270)
268 PRK07774 short chain dehydroge 96.1 0.041 8.8E-07 47.7 9.2 79 139-220 5-93 (250)
269 PRK07035 short chain dehydroge 96.1 0.039 8.5E-07 47.9 9.0 78 139-219 7-94 (252)
270 PRK06603 enoyl-(acyl carrier p 96.1 0.037 8.1E-07 48.5 8.9 78 139-219 7-95 (260)
271 PRK04457 spermidine synthase; 96.1 0.081 1.8E-06 46.6 10.9 95 138-241 65-176 (262)
272 PRK08267 short chain dehydroge 96.1 0.04 8.7E-07 48.1 9.0 77 141-220 2-87 (260)
273 PRK05854 short chain dehydroge 96.1 0.043 9.3E-07 49.6 9.4 79 139-220 13-103 (313)
274 PRK12549 shikimate 5-dehydroge 96.1 0.059 1.3E-06 48.0 10.1 42 139-180 126-167 (284)
275 PRK05653 fabG 3-ketoacyl-(acyl 96.1 0.045 9.7E-07 47.1 9.1 78 140-220 5-92 (246)
276 COG2227 UbiG 2-polyprenyl-3-me 96.1 0.058 1.3E-06 46.1 9.3 96 138-242 58-161 (243)
277 cd05311 NAD_bind_2_malic_enz N 96.1 0.098 2.1E-06 45.0 11.0 92 138-242 23-128 (226)
278 PRK09186 flagellin modificatio 96.0 0.042 9E-07 47.8 8.9 78 139-219 3-92 (256)
279 PRK06483 dihydromonapterin red 96.0 0.051 1.1E-06 46.7 9.4 79 140-220 2-84 (236)
280 PRK08690 enoyl-(acyl carrier p 96.0 0.041 8.8E-07 48.3 8.9 81 139-220 5-94 (261)
281 PRK08628 short chain dehydroge 96.0 0.04 8.6E-07 48.1 8.8 79 139-220 6-93 (258)
282 PRK08251 short chain dehydroge 96.0 0.051 1.1E-06 47.0 9.4 77 140-219 2-90 (248)
283 PRK06198 short chain dehydroge 96.0 0.04 8.6E-07 48.1 8.7 80 139-220 5-94 (260)
284 PRK09242 tropinone reductase; 96.0 0.049 1.1E-06 47.5 9.3 79 139-220 8-98 (257)
285 PRK07024 short chain dehydroge 96.0 0.049 1.1E-06 47.5 9.3 78 140-220 2-88 (257)
286 PRK08085 gluconate 5-dehydroge 96.0 0.055 1.2E-06 47.1 9.6 81 139-220 8-96 (254)
287 PRK06482 short chain dehydroge 96.0 0.045 9.7E-07 48.3 9.1 77 141-220 3-86 (276)
288 PRK06197 short chain dehydroge 96.0 0.046 1E-06 49.1 9.2 79 139-220 15-105 (306)
289 PRK12823 benD 1,6-dihydroxycyc 96.0 0.038 8.3E-07 48.2 8.5 78 139-219 7-93 (260)
290 PRK08263 short chain dehydroge 96.0 0.049 1.1E-06 48.1 9.2 80 140-220 3-87 (275)
291 PRK08277 D-mannonate oxidoredu 96.0 0.047 1E-06 48.2 9.1 80 139-219 9-96 (278)
292 PRK06079 enoyl-(acyl carrier p 96.0 0.046 1E-06 47.6 8.9 78 139-219 6-92 (252)
293 PF03807 F420_oxidored: NADP o 96.0 0.12 2.6E-06 37.6 9.8 85 142-241 1-93 (96)
294 PLN02253 xanthoxin dehydrogena 96.0 0.042 9.2E-07 48.6 8.7 79 139-220 17-104 (280)
295 PRK08261 fabG 3-ketoacyl-(acyl 95.9 0.021 4.7E-07 54.4 7.1 93 133-244 27-125 (450)
296 PRK06914 short chain dehydroge 95.9 0.049 1.1E-06 48.2 9.0 77 140-220 3-91 (280)
297 PRK06125 short chain dehydroge 95.9 0.047 1E-06 47.7 8.8 77 139-220 6-91 (259)
298 PRK08862 short chain dehydroge 95.9 0.056 1.2E-06 46.5 9.0 80 139-219 4-92 (227)
299 PRK08618 ornithine cyclodeamin 95.9 0.12 2.7E-06 47.0 11.7 94 138-245 125-224 (325)
300 PF08704 GCD14: tRNA methyltra 95.9 0.023 4.9E-07 49.4 6.5 108 130-243 31-147 (247)
301 PRK06718 precorrin-2 dehydroge 95.9 0.031 6.6E-07 47.2 7.2 106 139-259 9-115 (202)
302 PRK06114 short chain dehydroge 95.9 0.057 1.2E-06 47.0 9.2 81 139-220 7-96 (254)
303 PRK08703 short chain dehydroge 95.9 0.035 7.6E-07 47.8 7.8 81 139-220 5-97 (239)
304 PRK07067 sorbitol dehydrogenas 95.9 0.06 1.3E-06 46.9 9.3 80 140-220 6-90 (257)
305 PRK12384 sorbitol-6-phosphate 95.9 0.047 1E-06 47.6 8.7 80 140-220 2-91 (259)
306 PRK08415 enoyl-(acyl carrier p 95.9 0.056 1.2E-06 47.9 9.2 102 139-244 4-145 (274)
307 PRK08589 short chain dehydroge 95.9 0.05 1.1E-06 48.0 8.8 79 139-220 5-92 (272)
308 COG0421 SpeE Spermidine syntha 95.9 0.11 2.4E-06 46.1 10.8 99 141-242 78-190 (282)
309 PLN02823 spermine synthase 95.9 0.086 1.9E-06 48.1 10.3 101 139-242 103-220 (336)
310 PRK12481 2-deoxy-D-gluconate 3 95.9 0.058 1.3E-06 47.0 9.0 79 139-220 7-93 (251)
311 PRK12937 short chain dehydroge 95.8 0.22 4.7E-06 42.8 12.6 81 139-220 4-93 (245)
312 PRK07453 protochlorophyllide o 95.8 0.057 1.2E-06 49.0 9.2 78 139-219 5-92 (322)
313 PRK12367 short chain dehydroge 95.8 0.072 1.6E-06 46.4 9.5 73 139-220 13-89 (245)
314 PRK06101 short chain dehydroge 95.8 0.071 1.5E-06 46.0 9.4 42 141-183 2-44 (240)
315 TIGR01470 cysG_Nterm siroheme 95.8 0.18 3.8E-06 42.7 11.5 93 139-243 8-101 (205)
316 PLN03139 formate dehydrogenase 95.8 0.076 1.6E-06 49.3 10.0 90 139-243 198-292 (386)
317 TIGR01809 Shik-DH-AROM shikima 95.8 0.039 8.5E-07 49.2 7.9 76 139-221 124-201 (282)
318 PRK08317 hypothetical protein; 95.8 0.13 2.7E-06 44.2 10.9 102 131-242 11-124 (241)
319 PRK10258 biotin biosynthesis p 95.8 0.49 1.1E-05 41.2 14.7 99 133-243 36-141 (251)
320 PRK12826 3-ketoacyl-(acyl-carr 95.8 0.059 1.3E-06 46.5 8.9 81 139-220 5-93 (251)
321 PRK08159 enoyl-(acyl carrier p 95.8 0.058 1.2E-06 47.7 8.9 80 139-219 9-97 (272)
322 PRK06719 precorrin-2 dehydroge 95.8 0.11 2.3E-06 42.0 9.6 88 139-241 12-99 (157)
323 COG0373 HemA Glutamyl-tRNA red 95.8 0.069 1.5E-06 49.7 9.5 95 139-244 177-276 (414)
324 PRK08993 2-deoxy-D-gluconate 3 95.8 0.065 1.4E-06 46.7 9.1 81 139-220 9-95 (253)
325 PRK07985 oxidoreductase; Provi 95.8 0.15 3.2E-06 45.7 11.5 102 139-244 48-187 (294)
326 PRK07574 formate dehydrogenase 95.8 0.077 1.7E-06 49.3 9.8 90 139-243 191-285 (385)
327 PRK05876 short chain dehydroge 95.8 0.07 1.5E-06 47.2 9.3 79 139-220 5-93 (275)
328 PRK10538 malonic semialdehyde 95.8 0.066 1.4E-06 46.5 9.0 77 141-220 1-84 (248)
329 PRK07666 fabG 3-ketoacyl-(acyl 95.8 0.065 1.4E-06 46.1 8.9 81 139-220 6-94 (239)
330 COG0031 CysK Cysteine synthase 95.8 0.35 7.6E-06 43.1 13.4 60 132-192 54-116 (300)
331 PRK00258 aroE shikimate 5-dehy 95.8 0.034 7.3E-07 49.5 7.2 94 139-242 122-221 (278)
332 cd01065 NAD_bind_Shikimate_DH 95.8 0.05 1.1E-06 43.5 7.6 96 138-243 17-117 (155)
333 PRK06701 short chain dehydroge 95.8 0.21 4.5E-06 44.6 12.3 81 139-220 45-134 (290)
334 PRK07856 short chain dehydroge 95.8 0.053 1.1E-06 47.1 8.3 77 139-220 5-85 (252)
335 PRK08226 short chain dehydroge 95.7 0.069 1.5E-06 46.7 9.0 79 139-220 5-92 (263)
336 PRK06398 aldose dehydrogenase; 95.7 0.036 7.9E-07 48.5 7.2 75 139-220 5-82 (258)
337 PRK14175 bifunctional 5,10-met 95.7 0.099 2.2E-06 46.4 9.8 83 131-244 148-232 (286)
338 PRK06720 hypothetical protein; 95.7 0.097 2.1E-06 42.8 9.1 81 139-220 15-103 (169)
339 cd01483 E1_enzyme_family Super 95.7 0.14 3E-06 40.5 9.8 32 142-173 1-32 (143)
340 PRK12429 3-hydroxybutyrate deh 95.7 0.072 1.6E-06 46.2 9.0 81 139-220 3-91 (258)
341 PRK00312 pcm protein-L-isoaspa 95.7 0.048 1E-06 46.3 7.6 99 131-242 70-175 (212)
342 PRK07984 enoyl-(acyl carrier p 95.7 0.076 1.7E-06 46.7 9.1 78 139-219 5-93 (262)
343 PRK07074 short chain dehydroge 95.7 0.073 1.6E-06 46.3 9.0 80 140-220 2-87 (257)
344 PRK14103 trans-aconitate 2-met 95.7 0.16 3.5E-06 44.4 11.1 97 131-241 21-125 (255)
345 PRK06124 gluconate 5-dehydroge 95.7 0.084 1.8E-06 45.9 9.3 79 139-220 10-98 (256)
346 PRK01683 trans-aconitate 2-met 95.7 0.16 3.5E-06 44.4 11.1 100 131-242 23-130 (258)
347 PRK08264 short chain dehydroge 95.7 0.059 1.3E-06 46.3 8.2 75 139-220 5-83 (238)
348 TIGR01318 gltD_gamma_fam gluta 95.7 0.061 1.3E-06 51.6 9.0 78 139-222 140-238 (467)
349 PF01596 Methyltransf_3: O-met 95.7 0.036 7.7E-07 46.9 6.6 101 134-242 40-155 (205)
350 PRK07577 short chain dehydroge 95.7 0.05 1.1E-06 46.6 7.7 73 140-220 3-78 (234)
351 TIGR00477 tehB tellurite resis 95.6 0.058 1.2E-06 45.3 7.8 100 131-242 22-133 (195)
352 PRK14027 quinate/shikimate deh 95.6 0.12 2.7E-06 46.0 10.2 43 139-181 126-168 (283)
353 PRK06113 7-alpha-hydroxysteroi 95.6 0.079 1.7E-06 46.1 9.0 79 139-220 10-98 (255)
354 PF01209 Ubie_methyltran: ubiE 95.6 0.067 1.4E-06 46.2 8.3 106 132-247 40-158 (233)
355 TIGR02632 RhaD_aldol-ADH rhamn 95.6 0.053 1.1E-06 54.5 8.7 113 94-220 379-503 (676)
356 cd01078 NAD_bind_H4MPT_DH NADP 95.6 0.11 2.5E-06 43.3 9.5 76 139-222 27-109 (194)
357 PRK05884 short chain dehydroge 95.6 0.088 1.9E-06 45.0 9.0 74 142-219 2-78 (223)
358 PLN00141 Tic62-NAD(P)-related 95.6 0.086 1.9E-06 45.9 9.1 100 140-244 17-133 (251)
359 KOG1201 Hydroxysteroid 17-beta 95.6 0.049 1.1E-06 48.1 7.3 79 139-220 37-124 (300)
360 PRK06935 2-deoxy-D-gluconate 3 95.6 0.078 1.7E-06 46.2 8.9 78 139-220 14-101 (258)
361 COG0169 AroE Shikimate 5-dehyd 95.6 0.034 7.4E-07 49.3 6.5 44 139-182 125-168 (283)
362 cd00755 YgdL_like Family of ac 95.6 0.14 3.1E-06 44.1 10.1 91 140-234 11-126 (231)
363 PLN00203 glutamyl-tRNA reducta 95.6 0.065 1.4E-06 51.8 8.8 73 140-222 266-341 (519)
364 PRK12475 thiamine/molybdopteri 95.6 0.11 2.5E-06 47.4 10.0 36 139-174 23-58 (338)
365 PF02254 TrkA_N: TrkA-N domain 95.6 0.33 7.1E-06 36.6 11.1 92 143-241 1-95 (116)
366 PF00899 ThiF: ThiF family; I 95.6 0.097 2.1E-06 41.0 8.4 95 140-240 2-121 (135)
367 TIGR03840 TMPT_Se_Te thiopurin 95.5 0.13 2.8E-06 43.8 9.6 102 138-244 33-154 (213)
368 PRK08945 putative oxoacyl-(acy 95.5 0.064 1.4E-06 46.4 8.0 83 137-220 9-102 (247)
369 KOG4022 Dihydropteridine reduc 95.5 0.057 1.2E-06 43.2 6.8 98 140-244 3-131 (236)
370 PRK06484 short chain dehydroge 95.5 0.07 1.5E-06 51.8 9.0 79 139-220 4-89 (520)
371 PRK06849 hypothetical protein; 95.5 0.88 1.9E-05 42.5 16.1 95 139-234 3-100 (389)
372 PRK12936 3-ketoacyl-(acyl-carr 95.5 0.098 2.1E-06 45.0 9.1 81 139-220 5-90 (245)
373 PLN02244 tocopherol O-methyltr 95.5 0.074 1.6E-06 48.7 8.6 95 138-243 117-224 (340)
374 TIGR01963 PHB_DH 3-hydroxybuty 95.5 0.086 1.9E-06 45.7 8.7 77 141-220 2-88 (255)
375 PRK08287 cobalt-precorrin-6Y C 95.5 0.27 5.9E-06 40.7 11.4 100 131-242 23-131 (187)
376 PRK04266 fibrillarin; Provisio 95.5 0.34 7.4E-06 41.6 12.1 101 133-241 66-175 (226)
377 PRK15116 sulfur acceptor prote 95.5 0.32 7E-06 42.8 12.1 102 139-243 29-154 (268)
378 PRK06463 fabG 3-ketoacyl-(acyl 95.5 0.097 2.1E-06 45.6 9.0 79 139-220 6-89 (255)
379 PRK06077 fabG 3-ketoacyl-(acyl 95.5 0.29 6.4E-06 42.2 12.0 102 140-245 6-143 (252)
380 TIGR00138 gidB 16S rRNA methyl 95.5 0.14 3E-06 42.5 9.3 92 139-241 42-141 (181)
381 PRK07688 thiamine/molybdopteri 95.4 0.13 2.7E-06 47.2 9.8 35 139-173 23-57 (339)
382 PRK12809 putative oxidoreducta 95.4 0.091 2E-06 52.5 9.5 77 139-221 309-406 (639)
383 PRK08644 thiamine biosynthesis 95.4 0.14 3.1E-06 43.5 9.4 35 139-173 27-61 (212)
384 PRK06940 short chain dehydroge 95.4 0.12 2.5E-06 45.8 9.3 76 141-220 3-86 (275)
385 TIGR02355 moeB molybdopterin s 95.4 0.15 3.4E-06 44.2 9.8 34 140-173 24-57 (240)
386 COG1179 Dinucleotide-utilizing 95.4 0.3 6.4E-06 41.9 11.0 101 139-243 29-154 (263)
387 TIGR02354 thiF_fam2 thiamine b 95.4 0.062 1.3E-06 45.3 7.1 35 139-173 20-54 (200)
388 PRK08594 enoyl-(acyl carrier p 95.4 0.093 2E-06 45.9 8.5 78 139-219 6-96 (257)
389 PRK00121 trmB tRNA (guanine-N( 95.3 0.33 7.2E-06 40.9 11.5 98 139-242 40-156 (202)
390 cd00757 ThiF_MoeB_HesA_family 95.3 0.18 4E-06 43.4 10.0 33 140-172 21-53 (228)
391 TIGR00507 aroE shikimate 5-deh 95.3 0.14 3.1E-06 45.3 9.5 92 138-243 115-215 (270)
392 PRK08219 short chain dehydroge 95.3 0.086 1.9E-06 44.8 7.9 74 141-220 4-81 (227)
393 PRK07097 gluconate 5-dehydroge 95.3 0.13 2.8E-06 45.1 9.2 79 139-220 9-97 (265)
394 PRK12548 shikimate 5-dehydroge 95.3 0.11 2.5E-06 46.4 8.9 36 139-174 125-160 (289)
395 PF05368 NmrA: NmrA-like famil 95.3 0.18 4E-06 43.2 10.0 70 143-219 1-73 (233)
396 PRK06997 enoyl-(acyl carrier p 95.3 0.1 2.2E-06 45.7 8.5 79 139-220 5-94 (260)
397 PRK06523 short chain dehydroge 95.3 0.087 1.9E-06 46.0 8.0 75 139-219 8-86 (260)
398 PRK08303 short chain dehydroge 95.3 0.13 2.7E-06 46.4 9.2 34 139-173 7-41 (305)
399 PRK07791 short chain dehydroge 95.3 0.14 3E-06 45.7 9.4 79 139-220 5-102 (286)
400 PRK12743 oxidoreductase; Provi 95.3 0.13 2.9E-06 44.8 9.1 78 140-220 2-90 (256)
401 PF02558 ApbA: Ketopantoate re 95.2 0.057 1.2E-06 43.0 6.2 96 143-243 1-102 (151)
402 PRK05650 short chain dehydroge 95.2 0.12 2.6E-06 45.4 8.9 78 142-220 2-87 (270)
403 PTZ00098 phosphoethanolamine N 95.2 0.099 2.1E-06 46.1 8.2 104 131-243 44-157 (263)
404 PF13659 Methyltransf_26: Meth 95.2 0.11 2.4E-06 39.2 7.6 93 140-241 1-114 (117)
405 PRK13243 glyoxylate reductase; 95.2 0.18 3.9E-06 46.1 10.1 88 139-243 149-241 (333)
406 PRK15469 ghrA bifunctional gly 95.2 0.14 3.1E-06 46.3 9.3 88 139-243 135-227 (312)
407 PRK05690 molybdopterin biosynt 95.2 0.18 3.8E-06 44.0 9.6 35 139-173 31-65 (245)
408 PLN02589 caffeoyl-CoA O-methyl 95.2 0.22 4.7E-06 43.4 10.0 103 133-240 73-188 (247)
409 PRK07775 short chain dehydroge 95.2 0.13 2.9E-06 45.3 9.0 80 140-220 10-97 (274)
410 PRK12747 short chain dehydroge 95.2 0.51 1.1E-05 40.9 12.6 38 139-177 3-42 (252)
411 PRK08762 molybdopterin biosynt 95.2 0.23 5.1E-06 46.2 10.9 35 139-173 134-168 (376)
412 PF01564 Spermine_synth: Sperm 95.2 0.087 1.9E-06 45.9 7.5 96 139-242 76-191 (246)
413 PRK11036 putative S-adenosyl-L 95.2 0.33 7.1E-06 42.5 11.3 94 138-242 43-149 (255)
414 COG1052 LdhA Lactate dehydroge 95.2 0.27 5.8E-06 44.7 10.8 88 139-243 145-237 (324)
415 PRK07102 short chain dehydroge 95.1 0.17 3.8E-06 43.5 9.5 38 141-179 2-40 (243)
416 PLN03075 nicotianamine synthas 95.1 0.17 3.7E-06 45.1 9.3 97 139-241 123-232 (296)
417 PLN02233 ubiquinone biosynthes 95.1 0.36 7.8E-06 42.5 11.4 103 133-245 67-185 (261)
418 PRK05557 fabG 3-ketoacyl-(acyl 95.1 0.15 3.3E-06 43.8 9.0 79 139-220 4-93 (248)
419 TIGR01505 tartro_sem_red 2-hyd 95.1 0.22 4.8E-06 44.5 10.2 70 142-225 1-70 (291)
420 PLN02657 3,8-divinyl protochlo 95.1 0.18 3.9E-06 47.2 9.9 105 136-244 56-183 (390)
421 PRK07792 fabG 3-ketoacyl-(acyl 95.1 0.18 4E-06 45.3 9.7 81 139-220 11-99 (306)
422 PRK14618 NAD(P)H-dependent gly 95.0 0.28 6.1E-06 44.7 10.9 91 140-243 4-105 (328)
423 cd01487 E1_ThiF_like E1_ThiF_l 95.0 0.19 4.1E-06 41.3 8.7 33 142-174 1-33 (174)
424 PRK08063 enoyl-(acyl carrier p 95.0 0.16 3.5E-06 43.9 8.9 81 139-220 3-92 (250)
425 PRK08328 hypothetical protein; 95.0 0.16 3.5E-06 43.8 8.7 35 139-173 26-60 (231)
426 TIGR00417 speE spermidine synt 95.0 0.27 5.8E-06 43.5 10.2 96 138-242 71-186 (270)
427 PRK08278 short chain dehydroge 95.0 0.15 3.4E-06 44.9 8.8 79 139-220 5-100 (273)
428 PRK07424 bifunctional sterol d 95.0 0.17 3.8E-06 47.4 9.4 76 139-220 177-255 (406)
429 PLN02928 oxidoreductase family 95.0 0.17 3.6E-06 46.6 9.1 96 139-243 158-263 (347)
430 PRK12938 acetyacetyl-CoA reduc 95.0 0.098 2.1E-06 45.2 7.4 78 140-220 3-91 (246)
431 PRK07340 ornithine cyclodeamin 95.0 0.15 3.3E-06 45.9 8.7 102 138-254 123-228 (304)
432 TIGR02622 CDP_4_6_dhtase CDP-g 95.0 0.12 2.6E-06 47.5 8.3 77 139-220 3-85 (349)
433 COG0569 TrkA K+ transport syst 95.0 0.3 6.5E-06 41.9 10.2 75 142-222 2-78 (225)
434 PRK07417 arogenate dehydrogena 95.0 0.2 4.2E-06 44.6 9.4 68 142-222 2-69 (279)
435 PRK05565 fabG 3-ketoacyl-(acyl 94.9 0.17 3.7E-06 43.5 8.8 80 140-220 5-93 (247)
436 KOG0725 Reductases with broad 94.9 0.095 2.1E-06 46.4 7.1 79 139-220 7-99 (270)
437 PF02670 DXP_reductoisom: 1-de 94.9 0.42 9.1E-06 37.1 9.7 94 143-242 1-120 (129)
438 cd01492 Aos1_SUMO Ubiquitin ac 94.9 0.28 6E-06 41.2 9.6 35 139-173 20-54 (197)
439 PRK09135 pteridine reductase; 94.9 0.18 3.8E-06 43.5 8.7 35 139-174 5-40 (249)
440 PRK06171 sorbitol-6-phosphate 94.9 0.093 2E-06 46.0 7.1 76 139-220 8-87 (266)
441 PRK07370 enoyl-(acyl carrier p 94.9 0.15 3.2E-06 44.6 8.3 102 139-244 5-149 (258)
442 TIGR00446 nop2p NOL1/NOP2/sun 94.8 0.42 9.1E-06 42.1 11.1 100 134-241 66-198 (264)
443 PRK07066 3-hydroxybutyryl-CoA 94.8 0.23 5.1E-06 45.0 9.6 39 141-180 8-46 (321)
444 PRK12769 putative oxidoreducta 94.8 0.17 3.7E-06 50.8 9.3 77 138-220 325-422 (654)
445 PRK13255 thiopurine S-methyltr 94.8 0.41 8.9E-06 40.9 10.4 100 136-242 34-155 (218)
446 PRK08416 7-alpha-hydroxysteroi 94.8 0.24 5.3E-06 43.2 9.4 78 139-219 7-96 (260)
447 PRK05855 short chain dehydroge 94.7 0.16 3.5E-06 49.7 9.0 79 139-220 314-402 (582)
448 PRK11559 garR tartronate semia 94.7 0.39 8.5E-06 43.0 10.7 70 142-225 4-73 (296)
449 TIGR01289 LPOR light-dependent 94.7 0.21 4.6E-06 45.1 9.1 78 140-220 3-91 (314)
450 PRK13656 trans-2-enoyl-CoA red 94.7 0.21 4.5E-06 46.2 8.8 82 138-221 39-142 (398)
451 COG0334 GdhA Glutamate dehydro 94.7 0.27 5.8E-06 45.5 9.5 59 114-175 182-241 (411)
452 PF07021 MetW: Methionine bios 94.7 0.39 8.5E-06 39.8 9.5 71 136-215 10-80 (193)
453 PRK08220 2,3-dihydroxybenzoate 94.7 0.18 3.9E-06 43.6 8.3 76 139-220 7-86 (252)
454 TIGR02415 23BDH acetoin reduct 94.6 0.23 4.9E-06 43.1 8.9 77 141-220 1-87 (254)
455 PLN00016 RNA-binding protein; 94.6 0.39 8.5E-06 44.6 10.9 95 140-243 52-165 (378)
456 TIGR02752 MenG_heptapren 2-hep 94.6 0.16 3.6E-06 43.5 7.7 103 131-243 37-152 (231)
457 TIGR00563 rsmB ribosomal RNA s 94.5 0.38 8.2E-06 45.6 10.6 102 132-242 231-368 (426)
458 PRK12745 3-ketoacyl-(acyl-carr 94.5 0.26 5.7E-06 42.7 9.0 77 141-220 3-90 (256)
459 PRK03562 glutathione-regulated 94.5 0.33 7.1E-06 48.3 10.5 77 140-222 400-476 (621)
460 PRK06141 ornithine cyclodeamin 94.5 0.43 9.2E-06 43.2 10.5 93 138-243 123-220 (314)
461 PRK05562 precorrin-2 dehydroge 94.4 0.25 5.5E-06 42.2 8.3 112 139-264 24-137 (223)
462 PRK05599 hypothetical protein; 94.4 0.3 6.5E-06 42.3 9.1 75 142-220 2-87 (246)
463 PF01210 NAD_Gly3P_dh_N: NAD-d 94.4 0.4 8.6E-06 38.6 9.1 93 142-242 1-102 (157)
464 PTZ00146 fibrillarin; Provisio 94.4 0.51 1.1E-05 42.0 10.3 102 132-241 125-236 (293)
465 TIGR01829 AcAcCoA_reduct aceto 94.4 0.31 6.7E-06 41.8 9.1 77 141-220 1-88 (242)
466 PRK05597 molybdopterin biosynt 94.4 0.32 6.9E-06 44.9 9.5 36 139-174 27-62 (355)
467 PRK07201 short chain dehydroge 94.4 0.2 4.3E-06 50.1 8.9 78 140-220 371-458 (657)
468 PLN02986 cinnamyl-alcohol dehy 94.4 0.35 7.6E-06 43.7 9.7 39 139-178 4-43 (322)
469 PRK07069 short chain dehydroge 94.4 0.19 4.1E-06 43.4 7.7 76 142-220 1-89 (251)
470 KOG1502 Flavonol reductase/cin 94.4 0.26 5.7E-06 44.4 8.5 76 139-220 5-88 (327)
471 PRK11188 rrmJ 23S rRNA methylt 94.3 0.72 1.6E-05 39.1 10.9 98 137-242 49-165 (209)
472 PRK05708 2-dehydropantoate 2-r 94.3 0.2 4.3E-06 45.2 7.9 96 141-243 3-105 (305)
473 PRK14106 murD UDP-N-acetylmura 94.3 0.28 6E-06 46.8 9.4 70 139-220 4-78 (450)
474 PRK14192 bifunctional 5,10-met 94.3 0.4 8.7E-06 42.7 9.7 76 138-244 157-233 (283)
475 KOG1207 Diacetyl reductase/L-x 94.3 0.18 3.9E-06 41.0 6.6 43 139-182 6-49 (245)
476 PRK06522 2-dehydropantoate 2-r 94.3 0.22 4.7E-06 44.6 8.2 95 142-243 2-101 (304)
477 PF02719 Polysacc_synt_2: Poly 94.3 0.23 5E-06 44.1 8.1 75 143-220 1-87 (293)
478 COG0144 Sun tRNA and rRNA cyto 94.3 0.34 7.4E-06 44.7 9.5 101 133-241 150-287 (355)
479 COG2910 Putative NADH-flavin r 94.3 0.19 4.1E-06 41.3 6.7 92 141-243 1-105 (211)
480 PRK12746 short chain dehydroge 94.3 0.36 7.8E-06 41.8 9.3 78 140-220 6-100 (254)
481 PRK08936 glucose-1-dehydrogena 94.3 0.35 7.6E-06 42.2 9.2 79 139-220 6-95 (261)
482 TIGR00452 methyltransferase, p 94.2 0.24 5.2E-06 44.8 8.2 99 131-242 113-225 (314)
483 PRK12825 fabG 3-ketoacyl-(acyl 94.2 0.37 8.1E-06 41.3 9.3 77 140-219 6-93 (249)
484 PLN02256 arogenate dehydrogena 94.2 0.88 1.9E-05 41.0 11.8 97 131-243 27-128 (304)
485 PRK12480 D-lactate dehydrogena 94.2 0.53 1.1E-05 43.0 10.5 86 139-243 145-235 (330)
486 PLN02490 MPBQ/MSBQ methyltrans 94.2 0.33 7.2E-06 44.3 9.1 96 138-243 112-216 (340)
487 PRK07889 enoyl-(acyl carrier p 94.2 0.32 6.9E-06 42.5 8.8 79 139-220 6-95 (256)
488 KOG1252 Cystathionine beta-syn 94.2 0.41 9E-06 42.9 9.2 59 133-192 96-158 (362)
489 PRK10901 16S rRNA methyltransf 94.2 0.63 1.4E-05 44.1 11.3 101 133-242 238-372 (427)
490 cd05212 NAD_bind_m-THF_DH_Cycl 94.2 0.59 1.3E-05 36.9 9.3 82 132-244 19-102 (140)
491 PF01113 DapB_N: Dihydrodipico 94.2 0.8 1.7E-05 35.3 10.0 90 142-244 2-99 (124)
492 PLN02730 enoyl-[acyl-carrier-p 94.1 0.77 1.7E-05 41.3 11.3 37 139-177 8-47 (303)
493 PRK12550 shikimate 5-dehydroge 94.1 0.23 4.9E-06 44.0 7.7 70 136-220 118-188 (272)
494 PRK08223 hypothetical protein; 94.1 0.87 1.9E-05 40.5 11.2 35 139-173 26-60 (287)
495 PRK14188 bifunctional 5,10-met 94.1 0.54 1.2E-05 42.0 10.0 82 131-244 148-232 (296)
496 PRK03659 glutathione-regulated 94.1 0.46 9.9E-06 47.1 10.5 94 140-240 400-496 (601)
497 PRK14902 16S rRNA methyltransf 94.1 0.41 9E-06 45.6 9.9 100 133-241 244-378 (444)
498 PRK09730 putative NAD(P)-bindi 94.1 0.37 8.1E-06 41.4 8.9 77 141-220 2-89 (247)
499 PRK01438 murD UDP-N-acetylmura 94.0 0.35 7.6E-06 46.5 9.5 69 139-220 15-88 (480)
500 PRK05600 thiamine biosynthesis 94.0 0.47 1E-05 44.0 9.8 35 139-173 40-74 (370)
No 1
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=4.1e-56 Score=385.00 Aligned_cols=317 Identities=44% Similarity=0.790 Sum_probs=302.7
Q ss_pred CCCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 020435 1 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDL 80 (326)
Q Consensus 1 g~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 80 (326)
|.+|.+ +|.++|||.+|+|+++|++|+.++|||+|+..++-.|+.|.+|+.+++++|......+..|...+|++|++ -
T Consensus 49 G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls-~ 126 (366)
T COG1062 49 GDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLS-G 126 (366)
T ss_pred CCCCCC-CceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeee-c
Confidence 567766 99999999999999999999999999999999999999999999999999999888888888899999999 8
Q ss_pred CCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 81 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 81 ~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
++..+++|+|+++|+||.++++..++|++++.+++.++++.|...|.+.++...+++++|++|.|.|.|++|++++|-|+
T Consensus 127 ~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~ 206 (366)
T COG1062 127 NGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAK 206 (366)
T ss_pred CCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCc-cHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
..|++++++++.+++|++++++||+++++|..+ . +..+.++++|++|+|++|||+|+...+++++.++.+ ||+.+
T Consensus 207 ~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~---~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~-~G~~v 282 (366)
T COG1062 207 AAGAGRIIAVDINPEKLELAKKFGATHFVNPKE---VDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSV 282 (366)
T ss_pred HcCCceEEEEeCCHHHHHHHHhcCCceeecchh---hhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhc-CCeEE
Confidence 999999999999999999999999999999987 5 699999999999999999999999999999999999 59999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeE
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLR 319 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k 319 (326)
.+|........++++.++... .++.|+++|....+.|+.++++++.+|++++++++++.++|+||+|||+.+.+++.+|
T Consensus 283 ~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR 361 (366)
T COG1062 283 IIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIR 361 (366)
T ss_pred EEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceee
Confidence 999988888888888888874 8999999998888899999999999999999999999999999999999999999999
Q ss_pred EEEEe
Q 020435 320 CVIWM 324 (326)
Q Consensus 320 ~vv~~ 324 (326)
.||.+
T Consensus 362 ~Vi~~ 366 (366)
T COG1062 362 SVIRF 366 (366)
T ss_pred EEecC
Confidence 88864
No 2
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-54 Score=368.03 Aligned_cols=321 Identities=56% Similarity=0.978 Sum_probs=303.1
Q ss_pred CCCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCC-CCCCCCCccccc
Q 020435 1 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISP-WMPRDQTSRFKD 79 (326)
Q Consensus 1 g~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~g~~~~~~ 79 (326)
|.+|...+|.|+|||.+|+|+++|.+|+++++||+|+..+.-.|++|.+|+.+..|+|......... ++..+|.+||+
T Consensus 54 g~~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~- 132 (375)
T KOG0022|consen 54 GKDPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFT- 132 (375)
T ss_pred CCCccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeee-
Confidence 4567888999999999999999999999999999999999999999999999999999999887533 45569999999
Q ss_pred cCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHH
Q 020435 80 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 159 (326)
Q Consensus 80 ~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la 159 (326)
..|..++||+++.+|+||++++...+++|++..+++.++++.|.++|+|.|++..+++++|+++.|+|-|++|+++++-|
T Consensus 133 ~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Ga 212 (375)
T KOG0022|consen 133 CKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGA 212 (375)
T ss_pred eCCCceEEecccccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 160 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 160 ~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
|+.|+.++|+++.++++.+.++++|+++.+|+.+ ..+...+.+.+.|++|+|+.|||+|+...+++++.+..++||+-+
T Consensus 213 ka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d-~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv 291 (375)
T KOG0022|consen 213 KAAGASRIIGVDINPDKFEKAKEFGATEFINPKD-LKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSV 291 (375)
T ss_pred HhcCcccEEEEecCHHHHHHHHhcCcceecChhh-ccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEE
Confidence 9999999999999999999999999999999885 223688899999999999999999999999999999999999999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeE
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLR 319 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k 319 (326)
++|....+..+++.++.++. ..++.|+.+|.+..++++..+++.+.+++++++++++|.+|+++|++||+.|.+++..|
T Consensus 292 ~iGv~~~~~~i~~~p~~l~~-GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~GksiR 370 (375)
T KOG0022|consen 292 VIGVAAAGQEISTRPFQLVT-GRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSIR 370 (375)
T ss_pred EEEecCCCcccccchhhhcc-ccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceEE
Confidence 99998888899999888776 88899999999988999999999999999999999999999999999999999999999
Q ss_pred EEEEe
Q 020435 320 CVIWM 324 (326)
Q Consensus 320 ~vv~~ 324 (326)
.|+++
T Consensus 371 ~vl~~ 375 (375)
T KOG0022|consen 371 CVLWM 375 (375)
T ss_pred EEEeC
Confidence 99864
No 3
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=4.9e-54 Score=379.90 Aligned_cols=287 Identities=29% Similarity=0.461 Sum_probs=261.9
Q ss_pred CCCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEee-cCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 020435 1 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIP-HFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD 79 (326)
Q Consensus 1 g~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 79 (326)
|..|...+|+|+|||.+|+|+++|++|++|++||||.+ .+..+|+.|.||+++++++|.+... .|++.+|
T Consensus 50 G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~~~G------ 120 (339)
T COG1064 50 GDWPVPKLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYTTDG------ 120 (339)
T ss_pred CCCCCCCCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccc---cceeecC------
Confidence 56787889999999999999999999999999999988 8889999999999999999999887 8888888
Q ss_pred cCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHH
Q 020435 80 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 159 (326)
Q Consensus 80 ~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la 159 (326)
+|+||+++++++++++|+++++++||.+.|+..|+|+++ +..++++|++|+|+|.|++|.+++|+|
T Consensus 121 -------------Gyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~A 186 (339)
T COG1064 121 -------------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYA 186 (339)
T ss_pred -------------cceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHH
Confidence 999999999999999999999999999999999999975 559999999999999999999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 160 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 160 ~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
+++|+ +|+++++++++++.++++|++++++..+ .+..+.+++. +|+++|+++ +..+...++.|+++ |+++
T Consensus 187 ka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~~---~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v 256 (339)
T COG1064 187 KAMGA-EVIAITRSEEKLELAKKLGADHVINSSD---SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLV 256 (339)
T ss_pred HHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcCC---chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEE
Confidence 99998 9999999999999999999999999766 6777777664 999999999 77799999999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
++|.........++...++.+++++.||..++ +.|+++++++..+|++++. +.+.++++++++|++.|.+++..
T Consensus 257 ~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~---~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~g 331 (339)
T COG1064 257 LVGLPGGGPIPLLPAFLLILKEISIVGSLVGT---RADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRG 331 (339)
T ss_pred EECCCCCcccCCCCHHHhhhcCeEEEEEecCC---HHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeee
Confidence 99986434445677888888999999998877 5799999999999977665 54699999999999999999876
Q ss_pred EEEEEeC
Q 020435 319 RCVIWMG 325 (326)
Q Consensus 319 k~vv~~~ 325 (326)
|.||.+.
T Consensus 332 R~Vi~~~ 338 (339)
T COG1064 332 RAVIDMS 338 (339)
T ss_pred EEEecCC
Confidence 9998875
No 4
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-51 Score=350.34 Aligned_cols=290 Identities=27% Similarity=0.476 Sum_probs=259.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~ 85 (326)
+.|+++|||.+|+|.++|++|++++|||||++-|..+|+.|..||.+++|+|++..+ .+. ..+|
T Consensus 60 k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G------------ 124 (354)
T KOG0024|consen 60 KKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG------------ 124 (354)
T ss_pred ccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC------------
Confidence 589999999999999999999999999999999999999999999999999999997 433 3456
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
++++|++.++++++|+||++|+|++|++. +++++|||+ ++++++.|++|||+|||++|+++...||++|+.
T Consensus 125 -------~la~y~~~~~dfc~KLPd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~ 195 (354)
T KOG0024|consen 125 -------TLAEYYVHPADFCYKLPDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGAS 195 (354)
T ss_pred -------ceEEEEEechHheeeCCCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999 799999975 779999999999999999999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCC-CccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+.++..+++++.++++|++.+.+..... .+.+.+.+++..+. .+|++|||.|....++.++.+++.+ |++++.++
T Consensus 196 ~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~ 274 (354)
T KOG0024|consen 196 DVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGM 274 (354)
T ss_pred cEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEecc
Confidence 999999999999999999999887655511 13344455555555 7999999999999999999999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce--eEEE
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCV 321 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~--~k~v 321 (326)
. ....+|++.....|++.+.|++ .+.+.++..+++++++|++++++++++.|+++++.+||+.+.+++. .|++
T Consensus 275 g--~~~~~fpi~~v~~kE~~~~g~f---ry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~ 349 (354)
T KOG0024|consen 275 G--AEEIQFPIIDVALKEVDLRGSF---RYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVI 349 (354)
T ss_pred C--CCccccChhhhhhheeeeeeee---eeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEE
Confidence 4 5778899888888999999986 3335689999999999999999999999999999999999998874 4999
Q ss_pred EEeCC
Q 020435 322 IWMGE 326 (326)
Q Consensus 322 v~~~~ 326 (326)
+..++
T Consensus 350 i~~~~ 354 (354)
T KOG0024|consen 350 ITGPE 354 (354)
T ss_pred EeCCC
Confidence 98764
No 5
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-47 Score=327.88 Aligned_cols=293 Identities=26% Similarity=0.418 Sum_probs=256.4
Q ss_pred CCCCCCCCCcccCCceeEEEEEecCCCCCccCCCEE-eecCCCCCCCCccccCCCCCCCC--CCCCCCCCCCCCCCCccc
Q 020435 1 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVV-IPHFLADCTECVGCRSKKGNLCS--AFPFKISPWMPRDQTSRF 77 (326)
Q Consensus 1 g~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~~g~~~~ 77 (326)
|..+...+|+|+|||.+|+|+++|++|++|++|||| +-....+|++|++|+.+.+++|+ .... .|+..+|
T Consensus 58 gdwg~s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~---~g~~~DG---- 130 (360)
T KOG0023|consen 58 GDWGLSKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTY---NGVYHDG---- 130 (360)
T ss_pred ccCCcccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEec---cccccCC----
Confidence 345678899999999999999999999999999999 55666889999999999999999 5553 5555555
Q ss_pred cccCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHH
Q 020435 78 KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE 157 (326)
Q Consensus 78 ~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~ 157 (326)
+..+|+||+|+++++.++++||++++++.||.+.|+..|+|..| ...++.+|++|-|.|+|++|.+++|
T Consensus 131 ----------t~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq 199 (360)
T KOG0023|consen 131 ----------TITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQ 199 (360)
T ss_pred ----------CCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHH
Confidence 55567899999999999999999999999999999999999975 6678889999999999779999999
Q ss_pred HHHHcCCCEEEEEcCCh-hHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCc
Q 020435 158 GARLCGATRIIGVDVIS-EKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 236 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~-~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G 236 (326)
+||++|. +|++++++. .+.+.++.||++..++..+ +.+..+.+...+++++|-|.+. ....+..+..+++.+ |
T Consensus 200 ~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~--d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-G 273 (360)
T KOG0023|consen 200 YAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE--DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-G 273 (360)
T ss_pred HHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC--CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-C
Confidence 9999999 999999988 5566678899999988773 3889999999888888888776 444588999999999 9
Q ss_pred EEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 237 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 237 ~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
++|++|... .+..++.+.+..+.+.+.||.+|+ +.+.++++++..++.++.. + +..+++++++||++|.+++
T Consensus 274 t~V~vg~p~--~~~~~~~~~lil~~~~I~GS~vG~---~ket~E~Ldf~a~~~ik~~--I-E~v~~~~v~~a~erm~kgd 345 (360)
T KOG0023|consen 274 TLVLVGLPE--KPLKLDTFPLILGRKSIKGSIVGS---RKETQEALDFVARGLIKSP--I-ELVKLSEVNEAYERMEKGD 345 (360)
T ss_pred EEEEEeCcC--CcccccchhhhcccEEEEeecccc---HHHHHHHHHHHHcCCCcCc--e-EEEehhHHHHHHHHHHhcC
Confidence 999999853 378888888888899999999988 5789999999999977654 6 8899999999999999998
Q ss_pred ee-EEEEEeC
Q 020435 317 CL-RCVIWMG 325 (326)
Q Consensus 317 ~~-k~vv~~~ 325 (326)
-. |.||.+.
T Consensus 346 V~yRfVvD~s 355 (360)
T KOG0023|consen 346 VRYRFVVDVS 355 (360)
T ss_pred eeEEEEEEcc
Confidence 76 9998864
No 6
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=1.3e-45 Score=341.74 Aligned_cols=312 Identities=35% Similarity=0.613 Sum_probs=258.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++++++||||++.+..+|+.|.+|+.+++++|.........|...+|..++....+.+
T Consensus 59 ~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~- 137 (371)
T cd08281 59 RPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEI- 137 (371)
T ss_pred CCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCccc-
Confidence 3578999999999999999999999999999998888999999999999999977543211221111100000000000
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
.+..+.|+|+||+.++++.++++|+++++++|+++++.++|||+++.+.++++++++|||+|+|++|++++|+||..|+.
T Consensus 138 ~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~ 217 (371)
T cd08281 138 NHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGAS 217 (371)
T ss_pred ccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 00112359999999999999999999999999999999999999888888999999999999999999999999999985
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+|+++++++++.+.++++|+++++++.+ .++.+.+++++++++|++|||+|.+..+..++++++++ |+++.+|...
T Consensus 218 ~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~---~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~ 293 (371)
T cd08281 218 QVVAVDLNEDKLALARELGATATVNAGD---PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPD 293 (371)
T ss_pred cEEEEcCCHHHHHHHHHcCCceEeCCCc---hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCC
Confidence 6999999999999999999999999877 78888888887779999999999877799999999998 9999999754
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEE
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 322 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv 322 (326)
+.....++...++.|++++.+++.+....++++.++++++.+|+++++++++++|+++++++||+.+.+++..|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi 370 (371)
T cd08281 294 PEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVI 370 (371)
T ss_pred CCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 33345677777888999999997665434567899999999999998888999999999999999999988774443
No 7
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.2e-44 Score=333.17 Aligned_cols=319 Identities=46% Similarity=0.883 Sum_probs=255.6
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
.+|...+|.++|||++|+|+++|+++++|++||+|++.+..+|+.|.+|+.+++++|.........|...+|..++ .-.
T Consensus 50 ~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~-~~~ 128 (368)
T cd08300 50 ADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRF-SCK 128 (368)
T ss_pred CCccCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCcccc-ccC
Confidence 4455578999999999999999999999999999999889999999999999999997643210122222221110 001
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
|....++.+.|+|+||+.++++.++++|+++++++++++++++.|||+++.+.++++++++|||+|+|++|++++|+||.
T Consensus 129 g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~ 208 (368)
T cd08300 129 GKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKA 208 (368)
T ss_pred CcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 11122233457999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+.+|+++++++++.+.++++|+++++++.+ .++++.+.+++++++++|+||||+|+...+..+++++++++|+++.+
T Consensus 209 ~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~ 287 (368)
T cd08300 209 AGASRIIGIDINPDKFELAKKFGATDCVNPKD-HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVII 287 (368)
T ss_pred cCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc-cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEE
Confidence 99866999999999999999999999998765 11257788888887799999999998766899999997733999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCV 321 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~v 321 (326)
|.........+....+.. ...+.++..+....++++.++++++++|++++.++++++|+++++++|++.+.+++..|++
T Consensus 288 g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~~k~~ 366 (368)
T cd08300 288 GVAAAGQEISTRPFQLVT-GRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKSIRTV 366 (368)
T ss_pred ccCCCCCccccCHHHHhh-cCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCCceee
Confidence 975322233344444433 4566676655444456789999999999998888899999999999999999888777988
Q ss_pred EE
Q 020435 322 IW 323 (326)
Q Consensus 322 v~ 323 (326)
++
T Consensus 367 ~~ 368 (368)
T cd08300 367 VK 368 (368)
T ss_pred eC
Confidence 74
No 8
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=1.7e-44 Score=333.77 Aligned_cols=319 Identities=46% Similarity=0.844 Sum_probs=254.4
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
++|...+|.++|||++|+|+++|++|++|++||||++.+..+|+.|.+|+.+++++|........+|+..+|.-++. ..
T Consensus 49 ~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~-~~ 127 (368)
T TIGR02818 49 ADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFS-KD 127 (368)
T ss_pred CCCCCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccc-cC
Confidence 34445679999999999999999999999999999998889999999999999999976442211233222200000 00
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
|-...++.+.|+|+||+.++++.++++|+++++++++++++++.|||+++.+.++++++++|||+|+|++|++++|+||+
T Consensus 128 g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~ 207 (368)
T TIGR02818 128 GQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARM 207 (368)
T ss_pred CCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 00001122346999999999999999999999999999999999999988788899999999999999999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhc-CCcEEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIV 240 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~ 240 (326)
+|+.+|+++++++++++.++++|++++++..+ ...++.+.+++++++++|++|||+|.+..+..+++++++ + |+++.
T Consensus 208 ~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~-G~~v~ 285 (368)
T TIGR02818 208 AKASRIIAIDINPAKFELAKKLGATDCVNPND-YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGW-GESII 285 (368)
T ss_pred cCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCC-CeEEE
Confidence 99867999999999999999999999998653 113566778888777999999999987778999999977 5 99999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEE
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC 320 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~ 320 (326)
+|.........+....++. +..+.++..+....+.++.++++++++|+++++++++++|+++++++|++.+.+++..|+
T Consensus 286 ~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~k~ 364 (368)
T TIGR02818 286 IGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKSIRT 364 (368)
T ss_pred EeccCCCCcccccHHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCceeE
Confidence 9975333334444444443 445677654433334578999999999999888889999999999999999988777799
Q ss_pred EEEe
Q 020435 321 VIWM 324 (326)
Q Consensus 321 vv~~ 324 (326)
+|++
T Consensus 365 ~v~~ 368 (368)
T TIGR02818 365 VIHY 368 (368)
T ss_pred EeeC
Confidence 9875
No 9
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.7e-44 Score=332.67 Aligned_cols=304 Identities=35% Similarity=0.592 Sum_probs=255.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCC-CCCCCCCCCccccccCCcc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI-SPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~g~~~~~~~~~~~ 84 (326)
..+|+++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+++++|....... ..++ .+| ..
T Consensus 52 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~-~~g---------~~ 121 (358)
T TIGR03451 52 DEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTL-TDG---------TE 121 (358)
T ss_pred ccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcccccccccc-ccC---------cc
Confidence 357999999999999999999999999999999999999999999999999997432100 0000 001 00
Q ss_pred cccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 020435 85 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 164 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~ 164 (326)
...-.+.|+|+||+.+++..++++|+++++++|+++++.+.|||+++.+.++++++++|||+|+|++|++++|+||+.|+
T Consensus 122 ~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~ 201 (358)
T TIGR03451 122 LSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGA 201 (358)
T ss_pred cccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 00001235999999999999999999999999999999999999888788889999999999999999999999999998
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.+|+++++++++.+.++++|+++++++.+ .++.+.+++.+++ ++|++|||+|++..+..++++++++ |+++.+|.
T Consensus 202 ~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~ 277 (358)
T TIGR03451 202 SKIIAVDIDDRKLEWAREFGATHTVNSSG---TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGV 277 (358)
T ss_pred CeEEEEcCCHHHHHHHHHcCCceEEcCCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECC
Confidence 55999999999999999999999999877 7788889998887 9999999999876689999999998 99999997
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEE
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 323 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~ 323 (326)
.......+++...++.+++++.+++.+.....++++++++++++|++++.++++++|+++++++|++.+++++..|+++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~~~ 357 (358)
T TIGR03451 278 PTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVLRSVVE 357 (358)
T ss_pred CCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcceeEEe
Confidence 54333456676677788999998865433335678899999999999888889999999999999999998887788775
No 10
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.7e-44 Score=333.85 Aligned_cols=314 Identities=51% Similarity=0.918 Sum_probs=254.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC----CCCCcccccc-
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP----RDQTSRFKDL- 80 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~g~~~~~~~- 80 (326)
..+|.++|||++|+|+++|+++++|++||||++.+...|+.|.+|+.+++++|..... .++. ..|..+++..
T Consensus 63 ~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~---~~~~~~~~~~g~~~~~~~~ 139 (381)
T PLN02740 63 RAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRV---DPFKSVMVNDGKTRFSTKG 139 (381)
T ss_pred CCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccc---cccccccccCCCccccccc
Confidence 3579999999999999999999999999999999999999999999999999987553 1110 0110000000
Q ss_pred CCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 81 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 81 ~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
.+.-..++...|+|+||++++++.++++|+++++++++++++++.|||+++++.+++++|++|||+|+|++|++++|+||
T Consensus 140 ~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak 219 (381)
T PLN02740 140 DGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGAR 219 (381)
T ss_pred CCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 00000112234699999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
..|+.+|+++++++++.+.++++|++++++..+ ...++.+.+++++++++|++|||+|.+..+..++.++++++|+++.
T Consensus 220 ~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~ 298 (381)
T PLN02740 220 ARGASKIIGVDINPEKFEKGKEMGITDFINPKD-SDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL 298 (381)
T ss_pred HCCCCcEEEEcCChHHHHHHHHcCCcEEEeccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEE
Confidence 999856999999999999999999999998765 1124777888887668999999999987789999999882299999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEE
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC 320 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~ 320 (326)
+|.......+.+....++ +++++.|++.+......++.++++++.+++++++++++++|+++++++|++.+.+++..|+
T Consensus 299 ~G~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~~k~ 377 (381)
T PLN02740 299 LGIHPTPKMLPLHPMELF-DGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKALRC 377 (381)
T ss_pred EccCCCCceecccHHHHh-cCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCceeE
Confidence 997543223344444333 5889999876654434578999999999999888889999999999999999998887899
Q ss_pred EEEe
Q 020435 321 VIWM 324 (326)
Q Consensus 321 vv~~ 324 (326)
+|++
T Consensus 378 ~~~~ 381 (381)
T PLN02740 378 LLHL 381 (381)
T ss_pred EEeC
Confidence 9863
No 11
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=3.4e-44 Score=328.44 Aligned_cols=285 Identities=28% Similarity=0.441 Sum_probs=249.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++|+++++||+|++.+..+|+.|.+|+.+++++|..... .+|...+|
T Consensus 53 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~~~G------------- 117 (339)
T cd08239 53 YQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWNRDG------------- 117 (339)
T ss_pred CCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCccc--ccccCCCC-------------
Confidence 368999999999999999999999999999999999999999999999999987653 24444455
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|+||+.++++.++++|+++++++|++++++++|||+++ +.+++++|++|||+|+|++|++++|+|+++|+++
T Consensus 118 ------~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~ 190 (339)
T cd08239 118 ------GHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAED 190 (339)
T ss_pred ------cceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 999999999999999999999999999999999999976 5678899999999999999999999999999944
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++++++++.+.++++|+++++++.+ .+ .+.+.+.+++ ++|++|||.|+...+..++++++++ |+++.+|...
T Consensus 191 vi~~~~~~~~~~~~~~~ga~~~i~~~~---~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 265 (339)
T cd08239 191 VIGVDPSPERLELAKALGADFVINSGQ---DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGG 265 (339)
T ss_pred EEEECCCHHHHHHHHHhCCCEEEcCCc---ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCC
Confidence 999999999999999999999999876 55 6778888877 9999999999988678899999998 9999999743
Q ss_pred CCCccccc-HHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 246 PGSQLSLS-SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 246 ~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
. . .+. ...++.+++++.+++..+ .++++++++++.+|.+++.++++++|+++++++|++.+.++..+|+++.|
T Consensus 266 ~-~--~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~gKvvi~~ 339 (339)
T cd08239 266 E-L--TIEVSNDLIRKQRTLIGSWYFS---VPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGESGKVVFVF 339 (339)
T ss_pred C-c--ccCcHHHHHhCCCEEEEEecCC---HHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCCceEEEEeC
Confidence 2 2 233 235667899999987543 36799999999999998888899999999999999999887766999875
No 12
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=7.3e-44 Score=329.86 Aligned_cols=316 Identities=53% Similarity=0.957 Sum_probs=257.6
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCC-CCccccccC
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRD-QTSRFKDLR 81 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g~~~~~~~~ 81 (326)
.+...+|.++|||++|+|+++|+++++|++||||++.+..+|+.|.+|+.++++.|.........|.... +..++ ...
T Consensus 51 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~-~~~ 129 (369)
T cd08301 51 GQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRF-SIN 129 (369)
T ss_pred CCCCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCcccc-ccC
Confidence 3445679999999999999999999999999999999999999999999999999987542111121110 00011 011
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
|...+++...|+|+||+.+++..++++|+++++++++++++.+.|||+++++..++++|++|||+|+|++|++++|+|+.
T Consensus 130 g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~ 209 (369)
T cd08301 130 GKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARI 209 (369)
T ss_pred CcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 22222333446999999999999999999999999999999999999988888899999999999999999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhc-CCcEEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIV 240 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~ 240 (326)
+|+.+|+++++++++.+.++++|++.+++..+ ...++.+.+++++++++|++|||+|....+..+++++++ + |+++.
T Consensus 210 ~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~-~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~ 287 (369)
T cd08301 210 RGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD-HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVL 287 (369)
T ss_pred cCCCeEEEEcCCHHHHHHHHHcCCceEEcccc-cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEE
Confidence 99867999999999999999999999988754 113466777777766999999999988778899999999 5 89999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEE
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRC 320 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~ 320 (326)
+|........++....++ +++++.+++.+....+.+++++++++.+++++++++++++|+++++++|++.+.+++..|+
T Consensus 288 ~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~ 366 (369)
T cd08301 288 LGVPHKDAVFSTHPMNLL-NGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECLRC 366 (369)
T ss_pred ECcCCCCcccccCHHHHh-cCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCceeE
Confidence 997643334455544444 5899999876655445678999999999999888888899999999999999999988888
Q ss_pred EE
Q 020435 321 VI 322 (326)
Q Consensus 321 vv 322 (326)
++
T Consensus 367 ~~ 368 (369)
T cd08301 367 IL 368 (369)
T ss_pred Ee
Confidence 87
No 13
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=3.3e-43 Score=321.56 Aligned_cols=294 Identities=29% Similarity=0.395 Sum_probs=244.1
Q ss_pred CCCCCCCc-ccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC--CCCCCccccc
Q 020435 3 DFPAVFPR-ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM--PRDQTSRFKD 79 (326)
Q Consensus 3 ~~~~~~p~-i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--~~~g~~~~~~ 79 (326)
.|....|. ++|||++|+|+++| .++.+++||||++.+..+|+.|.+|+.+++++|.+..+.+...+ ..+|
T Consensus 49 ~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G------ 121 (350)
T COG1063 49 EPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG------ 121 (350)
T ss_pred CCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC------
Confidence 44455565 99999999999999 77889999999999999999999999999999996554211111 1345
Q ss_pred cCCcccccccccccccceEEecccceEE-cCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHH
Q 020435 80 LRGETIHHFVSVSSFSEYTVLDIAHVVK-VDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG 158 (326)
Q Consensus 80 ~~~~~~~~~~~~g~~a~~~~v~~~~~~~-ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~l 158 (326)
+|+||+++|.+++++ +||++ +.+++++..+++|++++........++++|+|+|+|++|++++++
T Consensus 122 -------------~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~ 187 (350)
T COG1063 122 -------------GFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIAL 187 (350)
T ss_pred -------------ceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 999999999766555 58888 566666666999998863445555566699999999999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCc
Q 020435 159 ARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWG 236 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G 236 (326)
++..|+.+|++++.++++++++++ .+++.+++..+ ++..+.+.+.+++ ++|++|||+|.+.++.+++++++++ |
T Consensus 188 a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~---~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G 263 (350)
T COG1063 188 AKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE---DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-G 263 (350)
T ss_pred HHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-C
Confidence 999999899999999999999998 66777776655 4677788899988 9999999999999899999999998 9
Q ss_pred EEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 237 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 237 ~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
+++.+|....... .++...++.|++++.|++.. ..+.+++.+++++++|++++..++++.++++++++||+.+.+.+
T Consensus 264 ~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~--~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~ 340 (350)
T COG1063 264 TVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP--SGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRK 340 (350)
T ss_pred EEEEEeccCCccC-ccCHHHHHhcccEEEeccCC--CCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcC
Confidence 9999998654332 66777888899999998431 22468999999999999999999999999999999999998855
Q ss_pred e--eEEEEEe
Q 020435 317 C--LRCVIWM 324 (326)
Q Consensus 317 ~--~k~vv~~ 324 (326)
. .|+++.+
T Consensus 341 ~~~~Kv~i~~ 350 (350)
T COG1063 341 EEAIKVVLKP 350 (350)
T ss_pred CCeEEEEecC
Confidence 3 4998864
No 14
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=2.6e-43 Score=323.09 Aligned_cols=281 Identities=20% Similarity=0.325 Sum_probs=238.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-----CCCCCcccccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-----PRDQTSRFKDL 80 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~g~~~~~~~ 80 (326)
..+|.++|||++|+|+++ ++++|++||||++.+..+|+.|.+|+.+++++|..... +|. ..+|
T Consensus 57 ~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~~~~~G------- 124 (343)
T PRK09880 57 IKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYFPHVDG------- 124 (343)
T ss_pred ccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eecccccCCCCC-------
Confidence 467999999999999999 78899999999999999999999999999999987654 332 1234
Q ss_pred CCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 81 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 81 ~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
+|+||++++++.++++|+++++++++. ..+++|||+++. .....++++|||+|+|++|++++|+|+
T Consensus 125 ------------~~aey~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak 190 (343)
T PRK09880 125 ------------GFTRYKVVDTAQCIPYPEKADEKVMAF-AEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVK 190 (343)
T ss_pred ------------ceeeeEEechHHeEECCCCCCHHHHHh-hcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 999999999999999999999877664 447889999764 455668999999999999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
++|+.+|+++++++++++.++++|+++++++.+ +++.+ +.+. .+++|+||||+|.+..+..++++++++ |+++.
T Consensus 191 ~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~---~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~ 264 (343)
T PRK09880 191 TLGAAEIVCADVSPRSLSLAREMGADKLVNPQN---DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQ 264 (343)
T ss_pred HcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc---ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEE
Confidence 999867999999999999999999999999876 55543 2222 237999999999977689999999998 99999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce-eE
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LR 319 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~-~k 319 (326)
+|... ...+++...++.|++++.++... .++++++++++++|++++.++++++|+++++++|++.+.+++. +|
T Consensus 265 ~G~~~--~~~~~~~~~~~~k~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gK 338 (343)
T PRK09880 265 VGMGG--APPEFPMMTLIVKEISLKGSFRF----TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAK 338 (343)
T ss_pred EccCC--CCCccCHHHHHhCCcEEEEEeec----cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceE
Confidence 99743 33566777778889999988532 4679999999999999888889999999999999999988765 59
Q ss_pred EEEEe
Q 020435 320 CVIWM 324 (326)
Q Consensus 320 ~vv~~ 324 (326)
+++.+
T Consensus 339 vvl~~ 343 (343)
T PRK09880 339 VQLVF 343 (343)
T ss_pred EEEeC
Confidence 99874
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=1.8e-42 Score=320.97 Aligned_cols=314 Identities=50% Similarity=0.931 Sum_probs=251.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCC-CCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPR-DQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~-~g~~~~~~~~~~~~ 85 (326)
.+|.++|||++|+|+++|++|++|++||+|++.+...|+.|.+|+.++++.|...... ..|... ++..++. ..|...
T Consensus 62 ~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~-~~g~~~ 139 (378)
T PLN02827 62 LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFS-IKGKPV 139 (378)
T ss_pred CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCccccc-ccCccc
Confidence 4689999999999999999999999999999998899999999999999999764310 001000 0000000 000000
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
.++...|+|+||+.+++..++++|+++++++++.+++.+.++|+++++.+++++|++|||+|+|++|++++|+|++.|+.
T Consensus 140 ~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~ 219 (378)
T PLN02827 140 YHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGAS 219 (378)
T ss_pred ccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 01112469999999999999999999999999999988899998877778899999999999999999999999999985
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
.|+++++++++.+.++++|+++++++.+ ..+++.+.+++++++++|++|||+|....+..+++.++++.|+++.+|...
T Consensus 220 ~vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~ 298 (378)
T PLN02827 220 QIIGVDINPEKAEKAKTFGVTDFINPND-LSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPK 298 (378)
T ss_pred eEEEECCCHHHHHHHHHcCCcEEEcccc-cchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcC
Confidence 6888888999999999999999998764 113577778888766999999999987668899999998228999999753
Q ss_pred CCCcccccH-HHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 246 PGSQLSLSS-FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 246 ~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
.. ..+.. ..++.+++++.|+..+......+++++++++++|++++.++++++|+++++++|++.+.+++.+|+||.+
T Consensus 299 ~~--~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~~k~vi~~ 376 (378)
T PLN02827 299 AK--PEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKCLRCVIHM 376 (378)
T ss_pred CC--ccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCceEEEEEe
Confidence 22 23333 3466789999998765443345789999999999998877899999999999999999998878999987
Q ss_pred C
Q 020435 325 G 325 (326)
Q Consensus 325 ~ 325 (326)
.
T Consensus 377 ~ 377 (378)
T PLN02827 377 P 377 (378)
T ss_pred c
Confidence 4
No 16
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=7.1e-42 Score=316.06 Aligned_cols=312 Identities=50% Similarity=0.919 Sum_probs=253.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++++++||+|++.+...|+.|.+|+.++++.|...... ..|...++..++.. .|.-.
T Consensus 53 ~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~~~~~~~~~~-~~~~~ 130 (365)
T cd08277 53 TLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLMPDGTSRFTC-KGKKI 130 (365)
T ss_pred CCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccccCCcccccc-CCccc
Confidence 46789999999999999999999999999999988999999999999999999875431 12222221000000 00000
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+++.+.|+|+||+.++++.++++|+++++++++++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.
T Consensus 131 ~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~ 210 (365)
T cd08277 131 YHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGAS 210 (365)
T ss_pred ccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 11112469999999999999999999999999999999999999887888999999999999999999999999999986
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhc-CCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-GWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~-~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++++++..+ ...++.+.+++++++++|++|||+|....+..+++++++ + |+++.+|..
T Consensus 211 ~Vi~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~ 288 (365)
T cd08277 211 RIIGVDINEDKFEKAKEFGATDFINPKD-SDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGW-GVSVVVGVP 288 (365)
T ss_pred eEEEEeCCHHHHHHHHHcCCCcEecccc-ccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCC-CEEEEEcCC
Confidence 7999999999999999999999998765 112356677777767999999999987768899999977 5 999999875
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEE
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 323 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~ 323 (326)
. ....+++...++. ++++.+++.+.+..+.++.+++++++++.++++++++++|+++++++|++.+.+++..|++++
T Consensus 289 ~-~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~k~~i~ 365 (365)
T cd08277 289 P-GAELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGECIRTVIT 365 (365)
T ss_pred C-ccccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCCceEeeC
Confidence 3 2234555555554 889998877665444578999999999998888889999999999999999998886788873
No 17
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.7e-42 Score=308.91 Aligned_cols=270 Identities=20% Similarity=0.335 Sum_probs=226.1
Q ss_pred ccCCceeEEEEEecCCCC------CccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 11 ILGHEAIGVVESVGENVD------GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 11 i~G~e~~G~V~~~G~~v~------~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
|+|||++|+|+++|++|+ ++++||||++.+..+|+.|.+|+.++++.|..... +|+...+
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~----------- 66 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALD----------- 66 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCccccc-----------
Confidence 689999999999999999 89999999999999999999999999999987654 3332100
Q ss_pred cccccccccccceEEeccc-ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcC
Q 020435 85 IHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 163 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~-~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g 163 (326)
.++...|+|+||+++++. .++++|+++++++++.+++.+.|||+++ +.....++++|||+|+|++|++++|+||+.|
T Consensus 67 -~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 67 -SGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred -CCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 000012499999999997 7999999999999999998999999975 4455669999999999999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 164 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 164 ~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+.+|+++++++++.+.++++|++++++..+ ..+.+++.+.+ ++|++|||+|.+..++.++++++++ |+++.+|
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G 218 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG 218 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEec
Confidence 955999999999999999999999987644 24566777777 9999999999888789999999998 9999999
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCC--CCCCCcceeeeeccccH
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEI 305 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~i~~~~~l~~i 305 (326)
...+....+++...++.|++++.++.... .++++++++++.++ +++++++++++|+++++
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 219 SVFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred cCCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 75433445777788888999999986332 46799999999984 67777889999999874
No 18
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=8.8e-42 Score=313.46 Aligned_cols=289 Identities=24% Similarity=0.366 Sum_probs=244.3
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|+.++++.|..... .|...+|
T Consensus 52 ~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G------------- 115 (347)
T PRK10309 52 YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSRRDG------------- 115 (347)
T ss_pred CCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcce---eccCCCC-------------
Confidence 368999999999999999999999999999999999999999999999999976443 4444455
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|+||+.++++.++++|+++++++|+++. +++++|++ ++...++++++|||+|+|++|++++|+|+++|+..
T Consensus 116 ------~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~ 187 (347)
T PRK10309 116 ------GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKS 187 (347)
T ss_pred ------ccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCe
Confidence 99999999999999999999999998875 56678886 46678889999999999999999999999999945
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-Ccc-EEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD-YCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d-~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|+++++++++.+.++++|++++++.++ .+ .+.+.+.+.+ ++| ++|||+|....+..++++++++ |+++.+|..
T Consensus 188 v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~ 262 (347)
T PRK10309 188 VTAIDINSEKLALAKSLGAMQTFNSRE---MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTL 262 (347)
T ss_pred EEEECCCHHHHHHHHHcCCceEecCcc---cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccC
Confidence 889999999999999999999998776 44 5567777776 898 9999999987789999999998 999999975
Q ss_pred CCCCccc-ccHHHHHhcCCEEEeeeccCCC--CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 245 QPGSQLS-LSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 245 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
....... ..+..++.+++++.+++.+... .+++++++++++++|++++++++++.|+++++++|++.+.+++.. |+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKv 342 (347)
T PRK10309 263 HHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKV 342 (347)
T ss_pred CCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEE
Confidence 4321111 1223566789999998754221 136789999999999998888899999999999999999888764 99
Q ss_pred EEEe
Q 020435 321 VIWM 324 (326)
Q Consensus 321 vv~~ 324 (326)
++++
T Consensus 343 vv~~ 346 (347)
T PRK10309 343 LLQI 346 (347)
T ss_pred EEeC
Confidence 9875
No 19
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=8.2e-42 Score=314.74 Aligned_cols=286 Identities=24% Similarity=0.366 Sum_probs=235.1
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccc
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRF 77 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~g~~~~ 77 (326)
++...+|.++|||++|+|+++|++|++|++||+|++.+. ..|+.|.+|+.+++++|....... ..|...+|
T Consensus 61 ~~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G---- 136 (360)
T PLN02586 61 WGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYG---- 136 (360)
T ss_pred cCCCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCC----
Confidence 343467999999999999999999999999999986554 479999999999999998654310 00222234
Q ss_pred cccCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHH
Q 020435 78 KDLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE 157 (326)
Q Consensus 78 ~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~ 157 (326)
+|+||++++++.++++|+++++++|+++++.+.|||+++.+...+++|++|||.|+|++|++++|
T Consensus 137 ---------------~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq 201 (360)
T PLN02586 137 ---------------GYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVK 201 (360)
T ss_pred ---------------ccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHH
Confidence 99999999999999999999999999999999999998766667789999999999999999999
Q ss_pred HHHHcCCCEEEEEcCChhHH-HHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCc
Q 020435 158 GARLCGATRIIGVDVISEKF-EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 236 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G 236 (326)
+||.+|+ +|++++.++++. +.++++|++++++..+ . +.+++.++ ++|++||++|.+..+..++++++++ |
T Consensus 202 ~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G 272 (360)
T PLN02586 202 IGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTD---P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-G 272 (360)
T ss_pred HHHHCCC-EEEEEeCCcchhhhHHHhCCCcEEEcCCC---H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-c
Confidence 9999999 888887776654 4567899999998655 2 34555544 7999999999876689999999998 9
Q ss_pred EEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 237 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 237 ~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
+++.+|... ....++...++.++..+.++..+. .++++++++++++|++++. + ++|+++++++||+.+.+++
T Consensus 273 ~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~ 344 (360)
T PLN02586 273 KLITLGLPE--KPLELPIFPLVLGRKLVGGSDIGG---IKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSD 344 (360)
T ss_pred EEEEeCCCC--CCCccCHHHHHhCCeEEEEcCcCC---HHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCC
Confidence 999998653 235566666677788888876443 3579999999999988753 4 6899999999999999887
Q ss_pred ee-EEEEEe
Q 020435 317 CL-RCVIWM 324 (326)
Q Consensus 317 ~~-k~vv~~ 324 (326)
.. |+++.+
T Consensus 345 ~~gkvvi~~ 353 (360)
T PLN02586 345 VRYRFVIDV 353 (360)
T ss_pred CcEEEEEEc
Confidence 64 999875
No 20
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.4e-41 Score=312.28 Aligned_cols=287 Identities=24% Similarity=0.384 Sum_probs=246.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++.+ +||+|++.+..+|++|.+|+.+++++|..... .|...+|
T Consensus 51 ~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~G------------ 114 (349)
T TIGR03201 51 HALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKM---PGNDMQG------------ 114 (349)
T ss_pred CCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cCcCCCC------------
Confidence 4578999999999999999999887 99999999999999999999999999976553 4444445
Q ss_pred ccccccccccceEEecccceEEcCC------CCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDP------TVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 159 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~------~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la 159 (326)
+|+||+.++++.++++|+ ++++++++++.+++.|||+++. ..+++++++|+|+|+|++|++++|+|
T Consensus 115 -------~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a 186 (349)
T TIGR03201 115 -------GFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTA 186 (349)
T ss_pred -------cccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 999999999999999999 8999999999999999999764 57889999999999999999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-Ccc----EEEEcCCcHHHHHHHHHHhhcC
Q 020435 160 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GAD----YCFECVGLASLVQEAYACCRKG 234 (326)
Q Consensus 160 ~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d----~v~d~~g~~~~~~~~~~~l~~~ 234 (326)
++.|+ +|+++++++++.+.++++|+++++++.+...+++.+.+++++++ ++| +||||+|+...++.++++++++
T Consensus 187 ~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~ 265 (349)
T TIGR03201 187 KAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG 265 (349)
T ss_pred HHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence 99999 89999999999999999999999987651113577778888887 886 8999999988788899999998
Q ss_pred CcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHc
Q 020435 235 WGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 314 (326)
Q Consensus 235 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~ 314 (326)
|+++.+|.... ...++...++.+++++.+++... .++++++++++++|++++.+++ +.|+++++++||+.+.+
T Consensus 266 -G~iv~~G~~~~--~~~~~~~~~~~~~~~~~g~~~~~---~~~~~~~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~ 338 (349)
T TIGR03201 266 -GTLVVVGYTMA--KTEYRLSNLMAFHARALGNWGCP---PDRYPAALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHH 338 (349)
T ss_pred -CeEEEECcCCC--CcccCHHHHhhcccEEEEEecCC---HHHHHHHHHHHHcCCCCcccce-EEecHHHHHHHHHHHHc
Confidence 99999997532 24556666777788888886432 4679999999999999877777 47999999999999998
Q ss_pred Ccee-EEEEEe
Q 020435 315 GKCL-RCVIWM 324 (326)
Q Consensus 315 ~~~~-k~vv~~ 324 (326)
++.. |+++++
T Consensus 339 ~~~~~k~~~~~ 349 (349)
T TIGR03201 339 HKLKRRAILTP 349 (349)
T ss_pred CCccceEEecC
Confidence 8766 888753
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.4e-41 Score=312.82 Aligned_cols=285 Identities=25% Similarity=0.389 Sum_probs=235.7
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCC-CCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCcccc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKIS----PWMPRDQTSRFK 78 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~g~~~~~ 78 (326)
+...+|.++|||++|+|+++|+++++|++||||++.+.. .|+.|.+|+.+++++|........ .|...+
T Consensus 56 ~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~------ 129 (375)
T PLN02178 56 GFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQ------ 129 (375)
T ss_pred CCCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCC------
Confidence 334579999999999999999999999999999876665 699999999999999987653100 121223
Q ss_pred ccCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcc-cCCCCEEEEEccCHHHHHHHH
Q 020435 79 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN-VEVGSTVVIFGLGSIGLAVAE 157 (326)
Q Consensus 79 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~-~~~~~~vlI~Gag~~G~~a~~ 157 (326)
|+|+||+.++++.++++|+++|+++++++++...|||+++..... .+++++|+|.|+|++|++++|
T Consensus 130 -------------G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq 196 (375)
T PLN02178 130 -------------GGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVK 196 (375)
T ss_pred -------------CccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHH
Confidence 499999999999999999999999999999999999997654433 368999999999999999999
Q ss_pred HHHHcCCCEEEEEcCChhH-HHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCc
Q 020435 158 GARLCGATRIIGVDVISEK-FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 236 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~-~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G 236 (326)
+||.+|+ +|++++.++++ .+.++++|+++++++.+ . +.+.+.++ ++|++|||+|.+..+..++++++++ |
T Consensus 197 ~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~---~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G 267 (375)
T PLN02178 197 IGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD---S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-G 267 (375)
T ss_pred HHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC---H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-C
Confidence 9999999 89888876554 67788999999998654 2 34555544 7999999999987689999999998 9
Q ss_pred EEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 237 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 237 ~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
+++.+|... ....++...++.+++++.|+..+. .+++.++++++++|++++. + +.|+++++++|++.+.+++
T Consensus 268 ~iv~vG~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~ 339 (375)
T PLN02178 268 KLVALGLPE--KPLDLPIFPLVLGRKMVGGSQIGG---MKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSD 339 (375)
T ss_pred EEEEEccCC--CCCccCHHHHHhCCeEEEEeCccC---HHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCC
Confidence 999998753 335667777778899999986543 3578999999999987654 5 6799999999999999887
Q ss_pred ee-EEEEEe
Q 020435 317 CL-RCVIWM 324 (326)
Q Consensus 317 ~~-k~vv~~ 324 (326)
.. |+++.+
T Consensus 340 ~~gkvvi~~ 348 (375)
T PLN02178 340 VRYRFVIDV 348 (375)
T ss_pred CceEEEEEe
Confidence 65 999886
No 22
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=2.5e-41 Score=314.21 Aligned_cols=296 Identities=23% Similarity=0.287 Sum_probs=232.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCC---CCCCCCCCCCccccccCCc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFK---ISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~g~~~~~~~~~~ 83 (326)
.+|.++|||++|+|+++|++|++|++||||++.+...|+.|.+|+.+++++|...... ..+|+...|
T Consensus 60 ~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~---------- 129 (393)
T TIGR02819 60 PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG---------- 129 (393)
T ss_pred CCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccC----------
Confidence 5799999999999999999999999999999999999999999999999999864310 001211000
Q ss_pred ccccccccccccceEEeccc--ceEEcCCCCCc----cccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHH
Q 020435 84 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPP----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE 157 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~--~~~~ip~~~s~----~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~ 157 (326)
.-.|+|+||+.+++. .++++|++++. ++++++.+++.|||+++ +..+++++++|||.|+|++|++++|
T Consensus 130 -----~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiq 203 (393)
T TIGR02819 130 -----GWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAA 203 (393)
T ss_pred -----CCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHH
Confidence 002499999999964 79999998754 35677778999999975 4578999999999888999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcH--------------H
Q 020435 158 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA--------------S 222 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~--------------~ 222 (326)
+|+++|+..|++++++++++++++++|++.+....+ .++.+.+.+++++ ++|++|||+|.+ .
T Consensus 204 lAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~---~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~ 280 (393)
T TIGR02819 204 SAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKD---ATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPAT 280 (393)
T ss_pred HHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHH
Confidence 999999955666677888999999999975443333 4677778888877 999999999986 3
Q ss_pred HHHHHHHHhhcCCcEEEEeccCCCCC-----------cccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCC
Q 020435 223 LVQEAYACCRKGWGKTIVLGVDQPGS-----------QLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE 291 (326)
Q Consensus 223 ~~~~~~~~l~~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~ 291 (326)
.+..++++++++ |+++.+|...... ..++.....+.+++++.+.. ....+.+.++++++++|+++
T Consensus 281 ~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~ 356 (393)
T TIGR02819 281 VLNSLMEVTRVG-GAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQ 356 (393)
T ss_pred HHHHHHHHhhCC-CEEEEeeecCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCC
Confidence 699999999998 9999999853211 11233344455666666532 11122346899999999999
Q ss_pred CCccee-eeeccccHHHHHHHHHcCceeEEEEEeC
Q 020435 292 LDKFVT-HEMKFEEINSAFDLLIKGKCLRCVIWMG 325 (326)
Q Consensus 292 ~~~~i~-~~~~l~~i~~a~~~~~~~~~~k~vv~~~ 325 (326)
+..+++ ++|+++++++||+.+.++...|++|+++
T Consensus 357 ~~~~i~~~~~~l~~~~~a~~~~~~~~~~Kvvi~~~ 391 (393)
T TIGR02819 357 IAKAVNVTVISLDDAPEGYAEFDAGAAKKFVIDPH 391 (393)
T ss_pred HHHceecceecHHHHHHHHHHHhhCCceEEEEeCC
Confidence 887777 6899999999999999887789999874
No 23
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=1.4e-40 Score=307.02 Aligned_cols=300 Identities=27% Similarity=0.402 Sum_probs=249.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCC------ccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDG------VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD 79 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~------~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 79 (326)
..+|.++|||++|+|+++|+++++ |++||+|++.+..+|++|.+|+.++++.|..... .|...+.
T Consensus 52 ~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~---~~~~~~~------ 122 (361)
T cd08231 52 VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK---YGHEASC------ 122 (361)
T ss_pred CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchh---ccccccc------
Confidence 567899999999999999999986 9999999999999999999999999999987664 3322110
Q ss_pred cCCcccccccccccccceEEeccc-ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHH
Q 020435 80 LRGETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG 158 (326)
Q Consensus 80 ~~~~~~~~~~~~g~~a~~~~v~~~-~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~l 158 (326)
+ .....|+|+||+.++++ +++++|++++.+++++++++++|||+++.+....+++++|||+|+|++|++++++
T Consensus 123 --~----~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~l 196 (361)
T cd08231 123 --D----DPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAA 196 (361)
T ss_pred --c----CCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 0 00012499999999986 7999999999999999988999999988776667799999999989999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 159 ARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
|+.+|+++|+++++++++.++++++|++++++..+.....+.+.+++.+++ ++|++|||.|+...+..++++++++ |+
T Consensus 197 ak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~ 275 (361)
T cd08231 197 AKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GT 275 (361)
T ss_pred HHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CE
Confidence 999998679999999999999999999999987651112233578888877 9999999999866688999999998 99
Q ss_pred EEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCC--CCCCCcceeeeeccccHHHHHHHHHcC
Q 020435 238 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK--ELELDKFVTHEMKFEEINSAFDLLIKG 315 (326)
Q Consensus 238 ~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~i~~~~~l~~i~~a~~~~~~~ 315 (326)
++.+|........+++...++.+++++.+++... .++++++++++.++ .+++.++++++|+++++++|++.+.++
T Consensus 276 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~ 352 (361)
T cd08231 276 YVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYD---PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESG 352 (361)
T ss_pred EEEEcCCCCCCccccCHHHHhhcccEEEEcccCC---chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcC
Confidence 9999875433345566656677899998886433 46799999999988 666777788999999999999999888
Q ss_pred ceeEEEEEe
Q 020435 316 KCLRCVIWM 324 (326)
Q Consensus 316 ~~~k~vv~~ 324 (326)
..+|++|++
T Consensus 353 ~~~k~vi~~ 361 (361)
T cd08231 353 TALKVVIDP 361 (361)
T ss_pred CceEEEeCC
Confidence 767999864
No 24
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=1.2e-40 Score=303.35 Aligned_cols=277 Identities=20% Similarity=0.236 Sum_probs=234.7
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDL 80 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 80 (326)
.+|...+|.++|||++|+|+++|+++++|++||+|++.+. ..|+.|.+|+.+++++|....+ .|+..+|
T Consensus 50 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~~~G------- 119 (329)
T TIGR02822 50 DLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWDTDG------- 119 (329)
T ss_pred CCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcccCC-------
Confidence 3444446899999999999999999999999999987665 4699999999999999987664 4554455
Q ss_pred CCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 81 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 81 ~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
+|+||+.+++..++++|+++++++++.+++.+.|||+++ ..+++++|++|||+|+|++|++++|+|+
T Consensus 120 ------------~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~ 186 (329)
T TIGR02822 120 ------------GYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVAL 186 (329)
T ss_pred ------------cceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999986 4688999999999999999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
..|+ +|+++++++++.++++++|++++++..+ .. .+++|+++++.+....+..++++++++ |+++.
T Consensus 187 ~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~---~~---------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~ 252 (329)
T TIGR02822 187 AQGA-TVHVMTRGAAARRLALALGAASAGGAYD---TP---------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAV 252 (329)
T ss_pred HCCC-eEEEEeCChHHHHHHHHhCCceeccccc---cC---------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEE
Confidence 9999 8999999999999999999999987543 11 126899999888777799999999998 99999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
+|..... ...++...++.+++++.+++... ++++.++++++++|+++ +++++|+++++++|++.+.+++.. |
T Consensus 253 ~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~~Gk 325 (329)
T TIGR02822 253 AGIHLTD-TPPLNYQRHLFYERQIRSVTSNT---RADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRFDGA 325 (329)
T ss_pred EeccCcc-CCCCCHHHHhhCCcEEEEeecCC---HHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCCceE
Confidence 9974322 23456666677889998876332 45788899999999875 357899999999999999988776 8
Q ss_pred EEE
Q 020435 320 CVI 322 (326)
Q Consensus 320 ~vv 322 (326)
+||
T Consensus 326 vvl 328 (329)
T TIGR02822 326 AVL 328 (329)
T ss_pred EEe
Confidence 886
No 25
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=4.4e-40 Score=304.13 Aligned_cols=312 Identities=41% Similarity=0.771 Sum_probs=263.4
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++.+++||+|++.+...|+.|.+|+.+++++|......+.+|...+|...+.- +|.-.
T Consensus 51 ~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~ 129 (365)
T cd05279 51 TPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTC-KGKPI 129 (365)
T ss_pred CCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeec-cCCcc
Confidence 34678999999999999999999999999999988889999999999999999887754444544444333332 44445
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+++.+.|+|++|+.++++.++++|+++++++++++.+++.+||+++.+.++++++++|||+|+|++|++++++|+.+|+.
T Consensus 130 ~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~ 209 (365)
T cd05279 130 HHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGAS 209 (365)
T ss_pred ccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 56667789999999999999999999999999999999999999888889999999999998899999999999999985
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCc--cHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhh-cCCcEEEEec
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK--SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCR-KGWGKTIVLG 242 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~--~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~-~~~G~~v~~g 242 (326)
.|+++++++++.+.++++|++++++..+ . ++.+.+++++++++|++||++|....+..++++++ ++ |+++.+|
T Consensus 210 ~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g 285 (365)
T cd05279 210 RIIAVDINKDKFEKAKQLGATECINPRD---QDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVG 285 (365)
T ss_pred eEEEEeCCHHHHHHHHHhCCCeeccccc---ccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEe
Confidence 5888888999999999999999998776 4 67777888775699999999997666889999999 98 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEE
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 322 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv 322 (326)
.........++...+ .++.++.+++.+.....+++..++++++++.+++.++++++|+++++++|++.+.+++..|+++
T Consensus 286 ~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~~ 364 (365)
T cd05279 286 VPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESIRTIL 364 (365)
T ss_pred cCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCceeeee
Confidence 753334566776666 5678888887665555678999999999998887667779999999999999998887778876
Q ss_pred E
Q 020435 323 W 323 (326)
Q Consensus 323 ~ 323 (326)
+
T Consensus 365 ~ 365 (365)
T cd05279 365 T 365 (365)
T ss_pred C
Confidence 3
No 26
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=5.4e-41 Score=303.25 Aligned_cols=267 Identities=25% Similarity=0.329 Sum_probs=224.8
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
|..++|+|+|.|++|+|+++|++|++|++||||+.... .+ ..
T Consensus 53 ~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~-------------------------~~--~~----------- 94 (326)
T COG0604 53 PVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGG-------------------------VG--RD----------- 94 (326)
T ss_pred CCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccC-------------------------CC--CC-----------
Confidence 44569999999999999999999999999999976420 00 22
Q ss_pred ccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 020435 84 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC 162 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~ 162 (326)
|+|+||+.+|++.++++|+++|+++||++++.+.|||+++.+..++++|++|||+|+ |++|.+++||||++
T Consensus 95 --------G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~ 166 (326)
T COG0604 95 --------GGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKAL 166 (326)
T ss_pred --------CcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHc
Confidence 499999999999999999999999999999999999999999899999999999985 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
|+ .++++.+++++.++++++|+++++++.+ .++.+.+++++++ ++|+|||++|+.. +..++.+|+++ |+++.+
T Consensus 167 G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~---~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~lv~i 240 (326)
T COG0604 167 GA-TVVAVVSSSEKLELLKELGADHVINYRE---EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GRLVSI 240 (326)
T ss_pred CC-cEEEEecCHHHHHHHHhcCCCEEEcCCc---ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CEEEEE
Confidence 98 7777777888888999999999999988 8899999999999 9999999999999 88899999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCC---CCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcC-ce
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGL---KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG-KC 317 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~-~~ 317 (326)
|...+.....++...++.+.+...+...... ...+.+.++.+++.+|.+++. ++.+||+++..++..+.... +.
T Consensus 241 g~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~--i~~~~~l~e~~~a~a~~~~~~~~ 318 (326)
T COG0604 241 GALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPV--IDRVYPLAEAPAAAAHLLLERRT 318 (326)
T ss_pred ecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcce--eccEechhhhHHHHHHHHcccCC
Confidence 9865334555666666777888887765432 112357779999999966554 87899999966665544444 44
Q ss_pred -eEEEEEe
Q 020435 318 -LRCVIWM 324 (326)
Q Consensus 318 -~k~vv~~ 324 (326)
+|+++++
T Consensus 319 ~GKvvl~~ 326 (326)
T COG0604 319 TGKVVLKV 326 (326)
T ss_pred cceEEEeC
Confidence 4999874
No 27
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.1e-41 Score=278.03 Aligned_cols=267 Identities=22% Similarity=0.280 Sum_probs=229.9
Q ss_pred CCCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 020435 1 MKDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDL 80 (326)
Q Consensus 1 g~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 80 (326)
|.|.+.++|++||.|.+|+|+++|++|+++++||||.... .-
T Consensus 57 GlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~------------------------------~~-------- 98 (336)
T KOG1197|consen 57 GLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLN------------------------------PF-------- 98 (336)
T ss_pred cccCCCCCCcCCCcccceEEEEecCCccccccccEEEEec------------------------------cc--------
Confidence 4566688999999999999999999999999999996421 11
Q ss_pred CCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHH
Q 020435 81 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGA 159 (326)
Q Consensus 81 ~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la 159 (326)
|.|+|++.+|...++++|+.+++++||++.+.++|||..+++..++++|++||+|.| |++|++++||+
T Consensus 99 -----------g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ 167 (336)
T KOG1197|consen 99 -----------GAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLL 167 (336)
T ss_pred -----------hhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHH
Confidence 399999999999999999999999999999999999998999999999999999965 99999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEE
Q 020435 160 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 238 (326)
Q Consensus 160 ~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 238 (326)
|+.|+ .+|++.++.++++.+++.|++|.|+++. +++.+++.+.+++ |+|+++|.+|... +...+.+|++. |.+
T Consensus 168 ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~---eD~v~~V~kiTngKGVd~vyDsvG~dt-~~~sl~~Lk~~-G~m 241 (336)
T KOG1197|consen 168 RAVGA-HTIATASTAEKHEIAKENGAEHPIDYST---EDYVDEVKKITNGKGVDAVYDSVGKDT-FAKSLAALKPM-GKM 241 (336)
T ss_pred HhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc---hhHHHHHHhccCCCCceeeeccccchh-hHHHHHHhccC-ceE
Confidence 99999 9999999999999999999999999999 9999999999988 9999999999999 99999999998 999
Q ss_pred EEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCC-CCC----HHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHH
Q 020435 239 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-KSD----IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 313 (326)
Q Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~----~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~ 313 (326)
+.+|... ....++++..+..|.+.+...++-.+.. +.. ..+++.++.+|.++++ |.++||++++.+|+..++
T Consensus 242 VSfG~as-gl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~die 318 (336)
T KOG1197|consen 242 VSFGNAS-GLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIE 318 (336)
T ss_pred EEecccc-CCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHH
Confidence 9999854 3444555555555666665543333322 222 3456777888977766 999999999999999999
Q ss_pred cCcee-EEEEEeC
Q 020435 314 KGKCL-RCVIWMG 325 (326)
Q Consensus 314 ~~~~~-k~vv~~~ 325 (326)
+.+.. |+++-+.
T Consensus 319 srktvGkvlLlp~ 331 (336)
T KOG1197|consen 319 SRKTVGKVLLLPG 331 (336)
T ss_pred hhhccceEEEeCC
Confidence 88765 9998764
No 28
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=2.2e-39 Score=298.03 Aligned_cols=283 Identities=26% Similarity=0.456 Sum_probs=247.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~ 85 (326)
.+|.++|||++|+|+++|++++++++||+|.+.+...|+.|.+|+.+++++|....+ .|+. ..|
T Consensus 63 ~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------ 127 (351)
T cd08233 63 TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGGGG------------ 127 (351)
T ss_pred CCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCCCC------------
Confidence 378999999999999999999999999999999999999999999999999975442 2322 134
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+|+||+.++...++++|+++++++++++ .++.|||+++ ..++++++++|||+|+|++|++++|+|+..|+.
T Consensus 128 -------~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~ 198 (351)
T cd08233 128 -------GFAEYVVVPAYHVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGAS 198 (351)
T ss_pred -------ceeeEEEechHHeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999998876 5888999986 778899999999999899999999999999986
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++.++++.+ .++.+.+++.+++ ++|++|||.|....+..++++++++ |+++.+|..
T Consensus 199 ~v~~~~~~~~~~~~~~~~ga~~~i~~~~---~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 274 (351)
T cd08233 199 KIIVSEPSEARRELAEELGATIVLDPTE---VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIW 274 (351)
T ss_pred EEEEECCCHHHHHHHHHhCCCEEECCCc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccC
Confidence 7999999999999999999999999887 7888889888887 8999999999766689999999998 999999975
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccH-HHHHHHHHcCce--eEEE
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI-NSAFDLLIKGKC--LRCV 321 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i-~~a~~~~~~~~~--~k~v 321 (326)
. ....+++..++.+++++.+++... .+++++++++++++++++.++++++|+++++ ++|++.+.+++. +|++
T Consensus 275 ~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v 349 (351)
T cd08233 275 E--KPISFNPNDLVLKEKTLTGSICYT---REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKIL 349 (351)
T ss_pred C--CCCccCHHHHHhhCcEEEEEeccC---cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEE
Confidence 4 345677777788899999886432 4689999999999998877778899999996 799999988774 5888
Q ss_pred E
Q 020435 322 I 322 (326)
Q Consensus 322 v 322 (326)
|
T Consensus 350 ~ 350 (351)
T cd08233 350 V 350 (351)
T ss_pred e
Confidence 7
No 29
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.4e-39 Score=298.15 Aligned_cols=282 Identities=26% Similarity=0.369 Sum_probs=224.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~ 85 (326)
.+|.++|||++|+|+++|++ ++|++||||+..+..+|+.|.+|+.+++++|...... ..|.. .+
T Consensus 56 ~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------- 120 (355)
T cd08230 56 EDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------- 120 (355)
T ss_pred CCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC-------------
Confidence 57899999999999999999 9999999999998899999999999999999765421 11221 22
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhh------hcccCCCCEEEEEccCHHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR------TANVEVGSTVVIFGLGSIGLAVAEGA 159 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~------~~~~~~~~~vlI~Gag~~G~~a~~la 159 (326)
|+|+||+.++++.++++|++++ +. +++..+++++++++.. ..+.+++++|||+|+|++|++++|+|
T Consensus 121 ------G~~aey~~~~~~~~~~~P~~~~-~~-a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~a 192 (355)
T cd08230 121 ------GFMREYFVDDPEYLVKVPPSLA-DV-GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLL 192 (355)
T ss_pred ------ccceeEEEeccccEEECCCCCC-cc-eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHH
Confidence 4999999999999999999999 44 4444466666654322 22357899999999999999999999
Q ss_pred HHcCCCEEEEEcC---ChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCc
Q 020435 160 RLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 236 (326)
Q Consensus 160 ~~~g~~~V~~~~~---~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G 236 (326)
|+.|+ +|+++++ ++++.+.++++|++. +++.+ +++.+ .+ ..+++|+||||+|.+..+..++++++++ |
T Consensus 193 k~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~---~~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G 263 (355)
T cd08230 193 RLRGF-EVYVLNRRDPPDPKADIVEELGATY-VNSSK---TPVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-G 263 (355)
T ss_pred HHcCC-eEEEEecCCCCHHHHHHHHHcCCEE-ecCCc---cchhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-c
Confidence 99999 8999987 678899999999987 45554 44433 21 1238999999999887789999999998 9
Q ss_pred EEEEeccCCCCCccccc----HHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCC----CCCcceeeeeccccHHHH
Q 020435 237 KTIVLGVDQPGSQLSLS----SFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKEL----ELDKFVTHEMKFEEINSA 308 (326)
Q Consensus 237 ~~v~~g~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~----~~~~~i~~~~~l~~i~~a 308 (326)
+++.+|...+....+++ ...++.|++++.|+..+. +++++++++++.++.+ .++++++++|+++++++|
T Consensus 264 ~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a 340 (355)
T cd08230 264 VVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNAN---KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEA 340 (355)
T ss_pred EEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCc---hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHH
Confidence 99999976442344444 345677899999986433 4689999999998862 356678899999999999
Q ss_pred HHHHHcCceeEEEEEe
Q 020435 309 FDLLIKGKCLRCVIWM 324 (326)
Q Consensus 309 ~~~~~~~~~~k~vv~~ 324 (326)
++.+.++. .|++|+|
T Consensus 341 ~~~~~~~~-~K~v~~~ 355 (355)
T cd08230 341 LTEKPDGE-IKVVIEW 355 (355)
T ss_pred HHhcccCC-eEEEeeC
Confidence 99887554 5999875
No 30
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.1e-38 Score=293.91 Aligned_cols=286 Identities=23% Similarity=0.363 Sum_probs=235.1
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCC-CCCCCccccCCCCCCCCCCCCCCC----CCCCCCCCcccc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLA-DCTECVGCRSKKGNLCSAFPFKIS----PWMPRDQTSRFK 78 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~g~~~~g~~~~~ 78 (326)
+...+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|+.++++.|........ .|...+
T Consensus 59 ~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~------ 132 (357)
T PLN02514 59 GMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQ------ 132 (357)
T ss_pred CcCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCC------
Confidence 334579999999999999999999999999999866544 699999999999999976532100 011122
Q ss_pred ccCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHH
Q 020435 79 DLRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEG 158 (326)
Q Consensus 79 ~~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~l 158 (326)
|+|+||+.++...++++|+++++++++.+++.+.|||+++......++|++|+|+|+|++|++++|+
T Consensus 133 -------------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~ 199 (357)
T PLN02514 133 -------------GGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKI 199 (357)
T ss_pred -------------CccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHH
Confidence 4999999999999999999999999999999999999987666666899999999889999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHH-HHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 159 ARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
||+.|+ +|+++++++++.+. ++++|++++++..+ . +.+.+.+. ++|++|||+|....+..++++++++ |+
T Consensus 200 Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~---~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~ 270 (357)
T PLN02514 200 AKAMGH-HVTVISSSDKKREEALEHLGADDYLVSSD---A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GK 270 (357)
T ss_pred HHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEecCCC---h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CE
Confidence 999999 88888888777655 46699988887544 2 33444443 7999999999876689999999998 99
Q ss_pred EEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce
Q 020435 238 TIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 317 (326)
Q Consensus 238 ~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~ 317 (326)
++.+|... ....++...++.+++++.+++.+. ..+++++++++++|++. +++ ++|+++++.+|++.+.+++.
T Consensus 271 iv~~G~~~--~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~ 342 (357)
T PLN02514 271 LILMGVIN--TPLQFVTPMLMLGRKVITGSFIGS---MKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDV 342 (357)
T ss_pred EEEECCCC--CCCcccHHHHhhCCcEEEEEecCC---HHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCC
Confidence 99999753 234666777788899999987544 35799999999999754 445 68999999999999999887
Q ss_pred e-EEEEEeC
Q 020435 318 L-RCVIWMG 325 (326)
Q Consensus 318 ~-k~vv~~~ 325 (326)
. |+++.++
T Consensus 343 ~gk~v~~~~ 351 (357)
T PLN02514 343 RYRFVVDVA 351 (357)
T ss_pred ceeEEEEcc
Confidence 5 9999875
No 31
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=2.6e-38 Score=292.91 Aligned_cols=315 Identities=43% Similarity=0.775 Sum_probs=248.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++.+++||+|++.+..+|+.|.+|+.++++.|.........|...++..+.. -+|.-.
T Consensus 58 ~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~~~~~ 136 (373)
T cd08299 58 TPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFT-CKGKPI 136 (373)
T ss_pred CCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccc-cCCccc
Confidence 3578999999999999999999999999999998889999999999999999976543211122111100000 001111
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+++.+.|+|+||++++++.++++|+++++++++++.+++.|||+++.+.++++++++|||+|+|++|++++++|+..|+.
T Consensus 137 ~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~ 216 (373)
T cd08299 137 HHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAS 216 (373)
T ss_pred ccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 23334579999999999999999999999999999999999999888889999999999998899999999999999986
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHh-hcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACC-RKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l-~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++++++..+ ..+++.+.+++++++++|+++||.|.+..+..++..+ +++ |+++.+|..
T Consensus 217 ~Vi~~~~~~~~~~~a~~lGa~~~i~~~~-~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~ 294 (373)
T cd08299 217 RIIAVDINKDKFAKAKELGATECINPQD-YKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVP 294 (373)
T ss_pred eEEEEcCCHHHHHHHHHcCCceEecccc-cchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccC
Confidence 7999999999999999999999998764 1123667777776668999999999866677766655 577 999999975
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
......++.... +.++.++.+++.+....++++.++++.+.++.+++++++++.|+++++++|++.+.+++..|+++++
T Consensus 295 ~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~~k~~~~~ 373 (373)
T cd08299 295 PSSQNLSINPML-LLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKSIRTVLTF 373 (373)
T ss_pred CCCceeecCHHH-HhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCcceEEEeC
Confidence 332234444432 3457888888766544445677888888888777777788999999999999999988777888864
No 32
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=3.6e-38 Score=291.32 Aligned_cols=312 Identities=32% Similarity=0.562 Sum_probs=249.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC-Ccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR-GET 84 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~-~~~ 84 (326)
..+|.++|||++|+|+++|++++++++||+|++.+. .|+.|.+|+.+++++|......-..+...+|..-+.... .++
T Consensus 53 ~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (365)
T cd08278 53 TPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPV 131 (365)
T ss_pred CCCCcccccceeEEEEEeCCCcccCCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCccc
Confidence 356889999999999999999999999999998764 899999999999999976542111122222200000000 001
Q ss_pred cccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 020435 85 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 164 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~ 164 (326)
..++..+|+|++|+.++++.++++|+++++++++.+++.+.||+.++.....++++++|||+|+|++|++++|+|++.|+
T Consensus 132 ~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~ 211 (365)
T cd08278 132 HGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGC 211 (365)
T ss_pred ccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 11123456999999999999999999999999999999999999988888889999999999889999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
++|+++++++++.+.++++|+++++++.+ .++.+.+++.+++++|+++||+|+...+..++++++++ |+++.+|..
T Consensus 212 ~~v~~~~~~~~k~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 287 (365)
T cd08278 212 TTIIAVDIVDSRLELAKELGATHVINPKE---EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAP 287 (365)
T ss_pred CeEEEEeCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcC
Confidence 66999999999999999999999998877 67888888888339999999999866689999999998 999999875
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEE
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 323 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~ 323 (326)
.......++...++.++.++.++........+.+++++++++++++++..++ ..|+++++++|++.+.+++..|++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~~a~~~~~~~~~~k~~~~ 365 (365)
T cd08278 288 PPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDINQAIADSESGKVIKPVLR 365 (365)
T ss_pred CCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHHHHHHHHHCCCceEEEEC
Confidence 3333455666666577888888765433224567889999999987553344 68999999999999998877798874
No 33
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.3e-37 Score=286.20 Aligned_cols=295 Identities=27% Similarity=0.353 Sum_probs=240.6
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
+...+|.++|||++|+|+++|++++++++||+|++.+..+|+.|..|..++.+.|.........+...+
T Consensus 49 ~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~----------- 117 (351)
T cd08285 49 PGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKD----------- 117 (351)
T ss_pred CCCCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCC-----------
Confidence 334668999999999999999999999999999998888999999999999999976431100111123
Q ss_pred ccccccccccccceEEeccc--ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 84 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
|+|+||+.++.+ .++++|+++++++++.++..+.|||++ .+.++++++++|||+|+|++|++++|+|+.
T Consensus 118 --------g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~ 188 (351)
T cd08285 118 --------GVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARL 188 (351)
T ss_pred --------cceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 499999999874 899999999999999998899999997 477889999999999889999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
+|+..|+++++++++.+.++++|++++++..+ .++.+.+++.+++ ++|++|||.++...+..++++++++ |+++.
T Consensus 189 ~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~ 264 (351)
T cd08285 189 RGAGRIIAVGSRPNRVELAKEYGATDIVDYKN---GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISN 264 (351)
T ss_pred cCCCeEEEEeCCHHHHHHHHHcCCceEecCCC---CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEE
Confidence 99966999999999999999999999999877 7788888888776 9999999999876689999999998 99999
Q ss_pred eccCCCCCcccccH--HHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCc-ceeeeeccccHHHHHHHHHcCce
Q 020435 241 LGVDQPGSQLSLSS--FEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDK-FVTHEMKFEEINSAFDLLIKGKC 317 (326)
Q Consensus 241 ~g~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~i~~~~~l~~i~~a~~~~~~~~~ 317 (326)
+|.........++. .....+..++.+.... ...++++++++++++|++++.. ...+.++++++++|++.+.+++.
T Consensus 265 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~ 342 (351)
T cd08285 265 VNYYGEDDYLPIPREEWGVGMGHKTINGGLCP--GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPD 342 (351)
T ss_pred ecccCCCceeecChhhhhhhccccEEEEeecC--CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccC
Confidence 98754322233332 2222345666654321 1246799999999999888743 34456899999999999998763
Q ss_pred --eEEEEEe
Q 020435 318 --LRCVIWM 324 (326)
Q Consensus 318 --~k~vv~~ 324 (326)
.|++|++
T Consensus 343 ~~~k~~~~~ 351 (351)
T cd08285 343 DLIKPVIIF 351 (351)
T ss_pred CeEEEEEeC
Confidence 5999874
No 34
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.9e-37 Score=282.51 Aligned_cols=289 Identities=19% Similarity=0.386 Sum_probs=238.4
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
+.|...+|.++|||++|+|+++|++|+.+++||+|++.+..+|+.|.+|..+++++|....+ .++..+|
T Consensus 47 ~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g-------- 115 (339)
T PRK10083 47 HNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVHRDG-------- 115 (339)
T ss_pred CCCcCCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCce---EEEccCC--------
Confidence 33444679999999999999999999999999999999999999999999999999976543 3333344
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
+|+||+.++...++++|+++++++++ +..++.++|+ +.+..+++++++|+|+|+|++|++++|+|+.
T Consensus 116 -----------~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~ 182 (339)
T PRK10083 116 -----------GFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKG 182 (339)
T ss_pred -----------cceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 99999999999999999999998876 4457888886 5677899999999999999999999999996
Q ss_pred -cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 162 -CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 162 -~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
+|+..++++++++++.+.++++|++++++..+ .++.+.+.. .+ ++|++|||.|.+..+..++++++++ |+++
T Consensus 183 ~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~---~~~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v 256 (339)
T PRK10083 183 VYNVKAVIVADRIDERLALAKESGADWVINNAQ---EPLGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIV 256 (339)
T ss_pred hCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEE
Confidence 69856888888999999999999999998876 566666643 23 6789999999776689999999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc-e-
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C- 317 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~-~- 317 (326)
.+|.... ...+....+..+++++.++.. ..+++++++++++++.+++..++++.|+++++++|++.+.+++ .
T Consensus 257 ~~g~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~ 330 (339)
T PRK10083 257 LMGFSSE--PSEIVQQGITGKELSIFSSRL----NANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHC 330 (339)
T ss_pred EEccCCC--CceecHHHHhhcceEEEEEec----ChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCce
Confidence 9987532 233344444556777777643 2467999999999998877655779999999999999998653 3
Q ss_pred eEEEEEeCC
Q 020435 318 LRCVIWMGE 326 (326)
Q Consensus 318 ~k~vv~~~~ 326 (326)
.|+++++.+
T Consensus 331 ~kvvv~~~~ 339 (339)
T PRK10083 331 CKVLLTFAE 339 (339)
T ss_pred EEEEEecCC
Confidence 599998864
No 35
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.1e-36 Score=281.20 Aligned_cols=311 Identities=44% Similarity=0.729 Sum_probs=252.7
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|+|++|+|+++|++++.+++||+|++.+..+|++|.+|+.++++.|..... +.+|...+++.++.. .|.+.
T Consensus 51 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~ 128 (363)
T cd08279 51 APLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAG-ILGGQLPDGTRRFTA-DGEPV 128 (363)
T ss_pred CCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCccccc-ccccccCCCcccccc-cCccc
Confidence 3567899999999999999999999999999999999999999999999999975431 111111112111111 12222
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
..+...|+|++|+.++++.++++|+++++++++++++.+.|||.++++..++.++++|||+|+|++|++++++|+..|+.
T Consensus 129 ~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~ 208 (363)
T cd08279 129 GAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGAS 208 (363)
T ss_pred cccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 22334569999999999999999999999999999999999999888889999999999998899999999999999994
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++++++.+. .++.+.+++++.+ ++|++|||.+........+++++++ |+++.++..
T Consensus 209 ~Vi~~~~~~~~~~~~~~~g~~~vv~~~~---~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~ 284 (363)
T cd08279 209 RIIAVDPVPEKLELARRFGATHTVNASE---DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMG 284 (363)
T ss_pred cEEEEcCCHHHHHHHHHhCCeEEeCCCC---ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecC
Confidence 4999999999999999999999998877 6788888888766 9999999999766689999999998 999999865
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEE
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVI 322 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv 322 (326)
.......++...+..++..+.++.++.....+.+++++++++++.+++.+.+.++|+++++++|++.+.+++..|.||
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 285 PPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred CCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 433445566666665677777776554334567899999999998876555678999999999999999887766654
No 36
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=5e-37 Score=280.36 Aligned_cols=283 Identities=22% Similarity=0.368 Sum_probs=241.3
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
.|...+|.++|||++|+|+++|++++++++||+|++.+ ...|+.|.+|+.++++.|..... .|+...|
T Consensus 49 ~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~~~g-------- 117 (333)
T cd08296 49 MPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVTRDG-------- 117 (333)
T ss_pred CCCCCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCc---cCcccCC--------
Confidence 34446788999999999999999999999999998754 46799999999999999988775 4554445
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
++++|+.++.+.++++|+++++++++.+++.+.|||+++. ..++.++++|||+|+|++|++++++|++
T Consensus 118 -----------~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~ 185 (333)
T cd08296 118 -----------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAK 185 (333)
T ss_pred -----------cceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999764 4589999999999999999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+ +|+++++++++.+.++++|++++++..+ .++.+.++++ +++|+++|+.+....+...+++++++ |+++.+
T Consensus 186 ~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~ 258 (333)
T cd08296 186 MGF-RTVAISRGSDKADLARKLGAHHYIDTSK---EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLIL 258 (333)
T ss_pred CCC-eEEEEeCChHHHHHHHHcCCcEEecCCC---ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEE
Confidence 999 8999999999999999999999998877 6677777665 37999999997666689999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
|... ...+++...++.+++++.++..+. ..++..+++++++++++. .+ +.|+++++.+|++.+.+++.. |+
T Consensus 259 g~~~--~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gk~ 330 (333)
T cd08296 259 GAAG--EPVAVSPLQLIMGRKSIHGWPSGT---ALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKARFRV 330 (333)
T ss_pred ecCC--CCCCcCHHHHhhcccEEEEeCcCC---HHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCCceeE
Confidence 8754 345566666778899999986332 357888999998886543 35 689999999999999988875 98
Q ss_pred EEE
Q 020435 321 VIW 323 (326)
Q Consensus 321 vv~ 323 (326)
+++
T Consensus 331 v~~ 333 (333)
T cd08296 331 VLT 333 (333)
T ss_pred EeC
Confidence 874
No 37
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=1.2e-37 Score=285.22 Aligned_cols=272 Identities=22% Similarity=0.233 Sum_probs=213.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|.+ +|++||||++.+...|+ |..| ...++|....+ .|...+|
T Consensus 56 ~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~~~G------------ 115 (341)
T cd08237 56 KKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSGYDG------------ 115 (341)
T ss_pred CCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCch-hccc--chhccCCCcce---eEecCCC------------
Confidence 368999999999999998764 79999999998887787 4455 35677865543 3433445
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhh--hcccCCCCEEEEEccCHHHHHHHHHHHH-c
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGLGSIGLAVAEGARL-C 162 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~vlI~Gag~~G~~a~~la~~-~ 162 (326)
+|+||+.+|+++++++|+++|+++|+++. ++++||+++.. .+.+++|++|||+|+|++|++++|+++. .
T Consensus 116 -------~~aey~~v~~~~~~~vP~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~ 187 (341)
T cd08237 116 -------FMQDYVFLPPDRLVKLPDNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIY 187 (341)
T ss_pred -------ceEEEEEEchHHeEECCCCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999887665 88999998654 3456889999999999999999999986 6
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCc---HHHHHHHHHHhhcCCcEE
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGL---ASLVQEAYACCRKGWGKT 238 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~---~~~~~~~~~~l~~~~G~~ 238 (326)
|..+|+++++++++++++++.+++..++ ++ ..+ ++|+||||+|+ +..+..++++++++ |++
T Consensus 188 g~~~vi~~~~~~~k~~~a~~~~~~~~~~-------~~-------~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~i 252 (341)
T cd08237 188 PESKLVVFGKHQEKLDLFSFADETYLID-------DI-------PEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTI 252 (341)
T ss_pred CCCcEEEEeCcHhHHHHHhhcCceeehh-------hh-------hhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEE
Confidence 6448999999999999988766643321 11 122 79999999994 45688999999998 999
Q ss_pred EEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCC---CCCCCcceeeeeccc---cHHHHHHHH
Q 020435 239 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK---ELELDKFVTHEMKFE---EINSAFDLL 312 (326)
Q Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g---~~~~~~~i~~~~~l~---~i~~a~~~~ 312 (326)
+++|... ...+++...++.|++++.++.... .+++++++++++++ +.++++++++.|+++ ++.++++..
T Consensus 253 v~~G~~~--~~~~~~~~~~~~k~~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~ 327 (341)
T cd08237 253 GLMGVSE--YPVPINTRMVLEKGLTLVGSSRST---REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESD 327 (341)
T ss_pred EEEeecC--CCcccCHHHHhhCceEEEEecccC---HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHH
Confidence 9999743 345666677788899999985432 35799999999999 346778899999986 455555555
Q ss_pred HcCceeEEEEEeC
Q 020435 313 IKGKCLRCVIWMG 325 (326)
Q Consensus 313 ~~~~~~k~vv~~~ 325 (326)
.++..+|++|+++
T Consensus 328 ~~~~~gKvvi~~~ 340 (341)
T cd08237 328 LTNSWGKTVMEWE 340 (341)
T ss_pred hhcCcceEEEEee
Confidence 5444459999875
No 38
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=8.5e-37 Score=279.50 Aligned_cols=283 Identities=29% Similarity=0.469 Sum_probs=244.5
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 5 PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 5 ~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
+..+|.++|||++|+|+++|+++.++++||+|++.+..+|+.|..|+.+++++|..... .|+..+|
T Consensus 54 ~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 119 (340)
T cd05284 54 PYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIGTDG----------- 119 (340)
T ss_pred cCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCccCCC-----------
Confidence 45678999999999999999999999999999999989999999999999999998886 6665566
Q ss_pred cccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhh-cccCCCCEEEEEccCHHHHHHHHHHHHcC
Q 020435 85 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAEGARLCG 163 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~vlI~Gag~~G~~a~~la~~~g 163 (326)
+|++|+.++.+.++++|+++++++++++++.+.|||+++... ..+.++++|||+|+|.+|++++++|+..|
T Consensus 120 --------~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g 191 (340)
T cd05284 120 --------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALT 191 (340)
T ss_pred --------cceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999999987665 46888999999999789999999999999
Q ss_pred -CCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 164 -ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 164 -~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
. +|+++++++++.+.++++|+++++++++ . +.+.+++++++ ++|+++||.++......++++++++ |+++.+
T Consensus 192 ~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~ 265 (340)
T cd05284 192 PA-TVIAVDRSEEALKLAERLGADHVLNASD---D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIV 265 (340)
T ss_pred CC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc---c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEE
Confidence 7 8999999999999999999999999887 5 78888888877 9999999999866689999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
|.... ..++....+.+++++.++... ..++++.++++++++.+++ .+ +.|+++++++|++.+++++.. |+
T Consensus 266 g~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~g~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkv 336 (340)
T cd05284 266 GYGGH---GRLPTSDLVPTEISVIGSLWG---TRAELVEVVALAESGKVKV--EI-TKFPLEDANEALDRLREGRVTGRA 336 (340)
T ss_pred cCCCC---CccCHHHhhhcceEEEEEecc---cHHHHHHHHHHHHhCCCCc--ce-EEEeHHHHHHHHHHHHcCCccceE
Confidence 86532 334444445678888887533 2467889999999997764 23 679999999999999988765 88
Q ss_pred EEEe
Q 020435 321 VIWM 324 (326)
Q Consensus 321 vv~~ 324 (326)
++.+
T Consensus 337 v~~~ 340 (340)
T cd05284 337 VLVP 340 (340)
T ss_pred EecC
Confidence 8753
No 39
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=2e-36 Score=281.68 Aligned_cols=307 Identities=27% Similarity=0.383 Sum_probs=244.5
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCC----CCCCCCCCCccc
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKI----SPWMPRDQTSRF 77 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~g~~~~ 77 (326)
.++..++|.++|||++|+|+++|++++++++||+|++.+..+|+.|.+|+.+++++|+...... .+|....|.+..
T Consensus 48 ~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (386)
T cd08283 48 YIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGY 127 (386)
T ss_pred CCCCCCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCccccccccccccccccccccc
Confidence 3444457899999999999999999999999999999999999999999999999998654310 011111110000
Q ss_pred cccCCcccccc-cccccccceEEeccc--ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHH
Q 020435 78 KDLRGETIHHF-VSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLA 154 (326)
Q Consensus 78 ~~~~~~~~~~~-~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~ 154 (326)
. +.+ ...|+|++|++++.+ .++++|+++++++|+++++.++|||+++ +.+++.++++|||+|+|++|++
T Consensus 128 ~-------~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~ 199 (386)
T cd08283 128 S-------HLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLF 199 (386)
T ss_pred c-------cccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHH
Confidence 0 000 113599999999988 8999999999999999999999999987 7888999999999988999999
Q ss_pred HHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCc-cHHHHHHHhcCC-CccEEEEcCCcH-----------
Q 020435 155 VAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDK-SVSQIIIDMTDG-GADYCFECVGLA----------- 221 (326)
Q Consensus 155 a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~-~~~~~i~~~~~~-g~d~v~d~~g~~----------- 221 (326)
++++|++.|+.+|+++++++++.+.+++++...++++.+ . ++.+.+++++++ ++|++|||+++.
T Consensus 200 ~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~---~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~ 276 (386)
T cd08283 200 AARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEE---VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQ 276 (386)
T ss_pred HHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCc---chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccc
Confidence 999999999846999999999999999884446777665 4 478888888877 999999999753
Q ss_pred ----------HHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCC
Q 020435 222 ----------SLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE 291 (326)
Q Consensus 222 ----------~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~ 291 (326)
..+..++++++++ |+++.+|..... ...++...++.+++++.++... ..+.+++++++++++++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~ 351 (386)
T cd08283 277 ALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGGT-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELD 351 (386)
T ss_pred cccccccCchHHHHHHHHHhccC-CEEEEEcCCCCC-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCC
Confidence 3478899999998 999999875322 3345554566778888887422 245788999999999887
Q ss_pred CCcceeeeeccccHHHHHHHHHcCc-e-eEEEEEe
Q 020435 292 LDKFVTHEMKFEEINSAFDLLIKGK-C-LRCVIWM 324 (326)
Q Consensus 292 ~~~~i~~~~~l~~i~~a~~~~~~~~-~-~k~vv~~ 324 (326)
...++++.|+++++++|++.+.+++ . +|++|++
T Consensus 352 ~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 386 (386)
T cd08283 352 PSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLKP 386 (386)
T ss_pred hhHceEEEecHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 7666778999999999999998876 3 4999863
No 40
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=2.8e-36 Score=282.68 Aligned_cols=279 Identities=19% Similarity=0.207 Sum_probs=225.1
Q ss_pred CCCcccCCceeEEEEEecCCCC-CccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~-~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
.+|+++|||++|+|+++|++|+ +|++||||++.+...|+.|..|.. +|+..+|
T Consensus 61 ~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~~~G------------ 114 (410)
T cd08238 61 KEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYTYPG------------ 114 (410)
T ss_pred CCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCC--------------ccccCCC------------
Confidence 4789999999999999999998 699999999998888998887721 2333345
Q ss_pred ccccccccccceEEeccc----ceEEcCCCCCccccccccchhhh---hhhhh--------hhhcccCCCCEEEEEcc-C
Q 020435 86 HHFVSVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVST---GVGAA--------WRTANVEVGSTVVIFGL-G 149 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~----~~~~ip~~~s~~~aa~l~~~~~t---a~~~l--------~~~~~~~~~~~vlI~Ga-g 149 (326)
+|+||++++++ .++++|+++++++|+++. ++++ ++.++ .+.+++++|++|+|+|+ |
T Consensus 115 -------~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G 186 (410)
T cd08238 115 -------GLATYHIIPNEVMEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAG 186 (410)
T ss_pred -------cceEEEEecHHhccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCC
Confidence 99999999987 689999999999988653 2222 33322 24577899999999985 9
Q ss_pred HHHHHHHHHHHHcC--CCEEEEEcCChhHHHHHHhc--------CCc-EEEcCCCCCCccHHHHHHHhcCC-CccEEEEc
Q 020435 150 SIGLAVAEGARLCG--ATRIIGVDVISEKFEIGKRF--------GVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFEC 217 (326)
Q Consensus 150 ~~G~~a~~la~~~g--~~~V~~~~~~~~~~~~~~~~--------g~~-~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~ 217 (326)
++|++++|+|++.| +.+|+++++++++++.++++ |++ +++++.+ ..++.+.+++++++ ++|++||+
T Consensus 187 ~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~--~~~~~~~v~~~t~g~g~D~vid~ 264 (410)
T cd08238 187 PMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT--IDDLHATLMELTGGQGFDDVFVF 264 (410)
T ss_pred HHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCc--cccHHHHHHHHhCCCCCCEEEEc
Confidence 99999999999975 44799999999999999987 666 5677543 14677888888888 99999999
Q ss_pred CCcHHHHHHHHHHhhcCCcEEEEeccCCC-CCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcce
Q 020435 218 VGLASLVQEAYACCRKGWGKTIVLGVDQP-GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFV 296 (326)
Q Consensus 218 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i 296 (326)
+|.+..+..++++++++ |+++.++.... ....+++...++.+++++.|+..+. +.+++++++++++|++++.+++
T Consensus 265 ~g~~~~~~~a~~~l~~~-G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~~~~i 340 (410)
T cd08238 265 VPVPELVEEADTLLAPD-GCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNPARMV 340 (410)
T ss_pred CCCHHHHHHHHHHhccC-CeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCchhhcE
Confidence 99877799999999998 98887754221 2234567677788899999986432 4679999999999999988899
Q ss_pred eeeeccccHHHHHHHHHcCceeEEEEEeC
Q 020435 297 THEMKFEEINSAFDLLIKGKCLRCVIWMG 325 (326)
Q Consensus 297 ~~~~~l~~i~~a~~~~~~~~~~k~vv~~~ 325 (326)
+++|+++++++|++.+..+..+|+++.++
T Consensus 341 t~~~~l~~~~~A~~~~~~~~~gKvvl~~~ 369 (410)
T cd08238 341 THIGGLNAAAETTLNLPGIPGGKKLIYTQ 369 (410)
T ss_pred EEEecHHHHHHHHHHhhccCCceEEEECC
Confidence 99999999999999999443459999874
No 41
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=3.8e-36 Score=275.89 Aligned_cols=295 Identities=29% Similarity=0.422 Sum_probs=240.9
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
.++..++|.++|||++|+|+++|++++++++||+|++.+..+|+.|.+|..+....|.........+...+
T Consensus 48 ~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 118 (347)
T cd05278 48 GVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRID--------- 118 (347)
T ss_pred CCCCCCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCC---------
Confidence 34445678999999999999999999999999999999999999999999999999866443111111223
Q ss_pred CcccccccccccccceEEeccc--ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 159 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la 159 (326)
|+|++|++++++ +++++|+++++++++++++.++|||+++ ...+++++++|||.|+|.+|++++|+|
T Consensus 119 ----------g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqla 187 (347)
T cd05278 119 ----------GGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGA 187 (347)
T ss_pred ----------CeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 499999999987 8999999999999999999999999986 778899999999988899999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEE
Q 020435 160 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 238 (326)
Q Consensus 160 ~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 238 (326)
+.+|..+|+++++++++.+.++++|++++++..+ .++.+.+++.+++ ++|++|||.+....+...+++|+++ |++
T Consensus 188 k~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~ 263 (347)
T cd05278 188 RLLGAARIIAVDSNPERLDLAKEAGATDIINPKN---GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTI 263 (347)
T ss_pred HHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc---chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEE
Confidence 9999647888888888888999999999998887 6788888888876 9999999999855589999999998 999
Q ss_pred EEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce-
Q 020435 239 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC- 317 (326)
Q Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~- 317 (326)
+.+|........... ...+.+++++.++.... .+.+++++++++++.+++...+...+++++++++++.+..++.
T Consensus 264 v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 339 (347)
T cd05278 264 ANVGVYGKPDPLPLL-GEWFGKNLTFKTGLVPV---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDG 339 (347)
T ss_pred EEEcCCCCCcccCcc-chhhhceeEEEeeccCc---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCC
Confidence 999854322111111 12234577776654222 4578899999999988765545688999999999999988775
Q ss_pred e-EEEEEe
Q 020435 318 L-RCVIWM 324 (326)
Q Consensus 318 ~-k~vv~~ 324 (326)
. |+++++
T Consensus 340 ~~~~vv~~ 347 (347)
T cd05278 340 CIKVVIRP 347 (347)
T ss_pred ceEEEecC
Confidence 3 888763
No 42
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=8e-36 Score=273.68 Aligned_cols=291 Identities=30% Similarity=0.425 Sum_probs=245.2
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 82 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 82 (326)
++...+|.++|||++|+|+++|++++.+++||+|++.+...|+.|.+|..+..+.|...... .|...+|
T Consensus 49 ~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g--------- 117 (345)
T cd08286 49 VPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNLIDG--------- 117 (345)
T ss_pred CCCCCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccc--cccccCC---------
Confidence 34445689999999999999999999999999999999999999999999988888765431 2322334
Q ss_pred cccccccccccccceEEeccc--ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 83 ETIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
+|++|+.++.+ .++++|++++.++++.+++.++|||+++....++.++++|||+|+|++|++++|+|+
T Consensus 118 ----------~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~ 187 (345)
T cd08286 118 ----------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQ 187 (345)
T ss_pred ----------eeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 99999999987 899999999999999999999999997777888999999999988999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
.+|..+|+++++++++.+.++++|+++++++.+ .++.+.+.+++++ ++|++|||++....+..+++.++++ |+++
T Consensus 188 ~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v 263 (345)
T cd08286 188 LYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK---GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIA 263 (345)
T ss_pred HcCCCeEEEEcCCHHHHHHHHHhCCCceecccc---ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEE
Confidence 999338999988888999999999999999877 6777888888877 9999999999877688999999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcC---c
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG---K 316 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~---~ 316 (326)
.+|... ....+++..++.+++++.+.... .+.++.++++++++.+++.++++++|++++++++++.+... .
T Consensus 264 ~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~ 337 (345)
T cd08286 264 NVGVHG--KPVDLHLEKLWIKNITITTGLVD----TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHK 337 (345)
T ss_pred EecccC--CCCCcCHHHHhhcCcEEEeecCc----hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCC
Confidence 998643 23455666656778888775322 24688899999999887666677999999999999999876 3
Q ss_pred eeEEEEEe
Q 020435 317 CLRCVIWM 324 (326)
Q Consensus 317 ~~k~vv~~ 324 (326)
..|++|++
T Consensus 338 ~~k~~~~~ 345 (345)
T cd08286 338 ALKVIIDF 345 (345)
T ss_pred eeEEEEeC
Confidence 45999875
No 43
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=5.3e-36 Score=279.61 Aligned_cols=283 Identities=19% Similarity=0.238 Sum_probs=237.0
Q ss_pred CcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCccccc
Q 020435 9 PRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHH 87 (326)
Q Consensus 9 p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~ 87 (326)
+.++|||++|+|+++|++++.+++||+|++.+...|+.|..|..+.+++|..... +|+. .+|
T Consensus 82 ~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~~g-------------- 144 (393)
T cd08246 82 YHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETNYG-------------- 144 (393)
T ss_pred ccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCCCC--------------
Confidence 3689999999999999999999999999999999999999999999999976554 4543 234
Q ss_pred ccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhh--cccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 88 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRT--ANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~--~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
+|++|++++...++++|+++++++++.+.++++|||+++... ++++++++|+|+|+ |++|++++++|+++|+
T Consensus 145 -----~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~ 219 (393)
T cd08246 145 -----SFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA 219 (393)
T ss_pred -----cceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999999999999987654 68899999999997 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCC-------------------CccHHHHHHHhcCC--CccEEEEcCCcHHH
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG--GADYCFECVGLASL 223 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~-------------------~~~~~~~i~~~~~~--g~d~v~d~~g~~~~ 223 (326)
+++++++++++.+.++++|++++++..+.. ...+.+.+.+++++ ++|++|||.|+..
T Consensus 220 -~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~- 297 (393)
T cd08246 220 -NPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT- 297 (393)
T ss_pred -eEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-
Confidence 888889999999999999999999864410 01356677788776 7999999999855
Q ss_pred HHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccc
Q 020435 224 VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFE 303 (326)
Q Consensus 224 ~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~ 303 (326)
+..++++++++ |+++.+|.... ....++...++.++.++.+++... .+++++++++++++.+.. .+++.|+++
T Consensus 298 ~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~~--~~~~~~~l~ 370 (393)
T cd08246 298 FPTSVFVCDRG-GMVVICAGTTG-YNHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRIDP--CLSKVFSLD 370 (393)
T ss_pred HHHHHHHhccC-CEEEEEcccCC-CCCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCcee--eeeEEEeHH
Confidence 88999999998 99999986432 223455555666788888875443 357889999999997663 367899999
Q ss_pred cHHHHHHHHHcC-cee-EEEE
Q 020435 304 EINSAFDLLIKG-KCL-RCVI 322 (326)
Q Consensus 304 ~i~~a~~~~~~~-~~~-k~vv 322 (326)
++++|++.+.++ +.. |+++
T Consensus 371 ~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 371 ETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred HHHHHHHHHHhCccccceEEE
Confidence 999999999887 554 7775
No 44
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=2e-35 Score=271.03 Aligned_cols=291 Identities=26% Similarity=0.392 Sum_probs=244.8
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
++..+|.++|+|++|+|+.+|++++.+++||+|++.+...|++|.+|..+..++|..... .++..+|
T Consensus 50 ~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g---------- 116 (345)
T cd08260 50 PDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFTHPG---------- 116 (345)
T ss_pred CCCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcc---cccCCCC----------
Confidence 334568999999999999999999999999999987778999999999999999988653 4444345
Q ss_pred ccccccccccccceEEeccc--ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 84 TIHHFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
+|++|+++++. +++++|+++++++++.+++.++|||+++.+..++.++++|+|+|+|++|++++++|+.
T Consensus 117 ---------~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~ 187 (345)
T cd08260 117 ---------SFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASA 187 (345)
T ss_pred ---------cceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 99999999974 8999999999999999999999999987778889999999999999999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.|+ +|+++++++++.+.++++|++++++..+ ..++.+.++++.++++|++|||.++.......+++++++ |+++.+
T Consensus 188 ~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~ 263 (345)
T cd08260 188 LGA-RVIAVDIDDDKLELARELGAVATVNASE--VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQV 263 (345)
T ss_pred cCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc--chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEe
Confidence 999 8999999999999999999999988653 245667777776558999999999765588999999998 999999
Q ss_pred ccCCCCCc-ccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 242 GVDQPGSQ-LSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 242 g~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
|....... ..++...+..+++++.++... ..+.++.++++++++.+.+...+.+.++++++++|++.+..++.. |
T Consensus 264 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 340 (345)
T cd08260 264 GLTLGEEAGVALPMDRVVARELEIVGSHGM---PAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGI 340 (345)
T ss_pred CCcCCCCCccccCHHHHhhcccEEEeCCcC---CHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCce
Confidence 87533222 445555555778888887532 245788999999999877655567899999999999999987765 8
Q ss_pred EEEE
Q 020435 320 CVIW 323 (326)
Q Consensus 320 ~vv~ 323 (326)
++++
T Consensus 341 ~v~~ 344 (345)
T cd08260 341 TVIT 344 (345)
T ss_pred EEec
Confidence 7753
No 45
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=1.5e-35 Score=275.64 Aligned_cols=289 Identities=23% Similarity=0.357 Sum_probs=238.0
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++.|++||+|++.+..+|+.|..|..+++++|..... .|+..+|
T Consensus 85 ~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~g------------ 149 (384)
T cd08265 85 TEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFSADG------------ 149 (384)
T ss_pred cCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeecCCC------------
Confidence 4568999999999999999999999999999999999999999999999999986553 5554455
Q ss_pred ccccccccccceEEecccceEEcCCCC-------Cccccccccchhhhhhhhhhhh-cccCCCCEEEEEccCHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTV-------PPNRACLLSCGVSTGVGAAWRT-ANVEVGSTVVIFGLGSIGLAVAE 157 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~-------s~~~aa~l~~~~~ta~~~l~~~-~~~~~~~~vlI~Gag~~G~~a~~ 157 (326)
+|++|+.++++.++++|+++ +.+ ++++..+++|||+++... .+++++++|||+|+|++|+++++
T Consensus 150 -------~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~ 221 (384)
T cd08265 150 -------AFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIA 221 (384)
T ss_pred -------cceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHH
Confidence 99999999999999999864 444 556667899999988666 68999999999988999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcH-HHHHHHHHHhhcCC
Q 020435 158 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGW 235 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~-~~~~~~~~~l~~~~ 235 (326)
+|+..|+.+|+++++++++.+.++++|+++++++.+....++.+.+++++++ ++|+|+||.|.. ..+..++++|+++
T Consensus 222 lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~- 300 (384)
T cd08265 222 LAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN- 300 (384)
T ss_pred HHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-
Confidence 9999998679999988999999999999999987751123678888888887 999999999973 3478899999998
Q ss_pred cEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcC
Q 020435 236 GKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 315 (326)
Q Consensus 236 G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~ 315 (326)
|+++.+|.... ...+....+..+..++.++.... ....+++++++++++.+++..++++.|+++++++|++.+.+.
T Consensus 301 G~~v~~g~~~~--~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~ 376 (384)
T cd08265 301 GKIVYIGRAAT--TVPLHLEVLQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER 376 (384)
T ss_pred CEEEEECCCCC--CCcccHHHHhhCceEEEEeeccC--CcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC
Confidence 99999986432 23344445555677777765321 234699999999999887655567899999999999997766
Q ss_pred ceeEEEE
Q 020435 316 KCLRCVI 322 (326)
Q Consensus 316 ~~~k~vv 322 (326)
...|+++
T Consensus 377 ~~~kvvv 383 (384)
T cd08265 377 TDGKITI 383 (384)
T ss_pred CCceEEe
Confidence 5557775
No 46
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=4.9e-35 Score=267.62 Aligned_cols=286 Identities=30% Similarity=0.525 Sum_probs=239.7
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
+...+|.++|+|++|+|+++|++++++++||+|+..+..+|+.|..|+.++++.|..... .++...|
T Consensus 49 ~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g---------- 115 (337)
T cd08261 49 PFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQV---LGVHRDG---------- 115 (337)
T ss_pred CcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCe---eeecCCC----------
Confidence 334568899999999999999999999999999998888999999999999999953322 2322234
Q ss_pred ccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcC
Q 020435 84 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 163 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g 163 (326)
+|++|+.++++ ++++|+++++++++++ ..++++++++ +..++.++++|||+|+|.+|++++|+|+.+|
T Consensus 116 ---------~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g 183 (337)
T cd08261 116 ---------GFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARG 183 (337)
T ss_pred ---------cceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 99999999999 9999999999999877 5788888865 7788999999999988999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 164 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 164 ~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
. +|+++.+++++.+.++++|+++++++.+ .++.+.+++.+++ ++|++|||.++...+..++++|+++ |+++.++
T Consensus 184 ~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g 258 (337)
T cd08261 184 A-RVIVVDIDDERLEFARELGADDTINVGD---EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVG 258 (337)
T ss_pred C-eEEEECCCHHHHHHHHHhCCCEEecCcc---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEc
Confidence 9 8999999999999999999999999887 6788888888877 8999999998876688999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc-e-eEE
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK-C-LRC 320 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~-~-~k~ 320 (326)
... ....++...+..+++++.++.. ...+.++.++++++++.+++.+.+...+++++++++++.+.+++ . .|+
T Consensus 259 ~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~ 333 (337)
T cd08261 259 LSK--GPVTFPDPEFHKKELTILGSRN---ATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKV 333 (337)
T ss_pred CCC--CCCccCHHHHHhCCCEEEEecc---CChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEE
Confidence 653 2334455555667788777632 23457889999999998876334668999999999999999873 5 499
Q ss_pred EEEe
Q 020435 321 VIWM 324 (326)
Q Consensus 321 vv~~ 324 (326)
++++
T Consensus 334 v~~~ 337 (337)
T cd08261 334 LIEF 337 (337)
T ss_pred EEeC
Confidence 9875
No 47
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=3.9e-35 Score=268.86 Aligned_cols=287 Identities=28% Similarity=0.429 Sum_probs=241.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|+|++|+|+++|++++.+++||+|++.++..|+.|.+|..+..++|....+ .|....|
T Consensus 51 ~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------ 115 (343)
T cd08235 51 LKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKK---FGNLYDG------------ 115 (343)
T ss_pred CCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcce---eccCCCC------------
Confidence 4568899999999999999999999999999999999999999999999999976654 4444445
Q ss_pred ccccccccccceEEecccc-----eEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAH-----VVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~-----~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
+|++|+.++++. ++++|+++++++++++ +++.+||+++. ..+++++++|||+|+|.+|++++|+|+
T Consensus 116 -------~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~ 186 (343)
T cd08235 116 -------GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAK 186 (343)
T ss_pred -------cceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 999999999998 9999999999999876 68899999874 458999999999988999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
..|...|+++++++++.+.++++|+++++++++ .++.+.+++.+++ ++|++|||.++.......+++++++ |+++
T Consensus 187 ~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v 262 (343)
T cd08235 187 ASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE---EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRIL 262 (343)
T ss_pred HcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc---cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEE
Confidence 999933999999999999988999999998887 7888888888877 8999999999776588999999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeE
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLR 319 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k 319 (326)
.++.........++...+..+++.+.++.... .+.++.++++++++.+++.+.+...++++++.++++.+.+++..|
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~k 339 (343)
T cd08235 263 FFGGLPKGSTVNIDPNLIHYREITITGSYAAS---PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGKSLK 339 (343)
T ss_pred EEeccCCCCCcccCHHHHhhCceEEEEEecCC---hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCCcEE
Confidence 99864333334455555666788887765322 457889999999998765445668899999999999999888338
Q ss_pred EEEE
Q 020435 320 CVIW 323 (326)
Q Consensus 320 ~vv~ 323 (326)
+|++
T Consensus 340 ~vi~ 343 (343)
T cd08235 340 IVIT 343 (343)
T ss_pred EEeC
Confidence 8863
No 48
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=3.2e-35 Score=270.27 Aligned_cols=282 Identities=27% Similarity=0.436 Sum_probs=236.2
Q ss_pred CCCcccCCceeEEEEEecCCCC--CccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC--CCCCccccccCC
Q 020435 7 VFPRILGHEAIGVVESVGENVD--GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP--RDQTSRFKDLRG 82 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~--~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~g~~~~~~~~~ 82 (326)
.+|.++|||++|+|+++|+.++ +|++||+|+..+..+|+.|.+|+.+.++.|..... +|+. ..|
T Consensus 61 ~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~g--------- 128 (350)
T cd08256 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQNNVNG--------- 128 (350)
T ss_pred CCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeeccCCCC---------
Confidence 5788999999999999999999 89999999999999999999999999999965432 3331 234
Q ss_pred cccccccccccccceEEeccc-ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 83 ETIHHFVSVSSFSEYTVLDIA-HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~-~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
+|++|+.++++ .++++|+++++++++++ .+++|+|+++ +.++++++++|+|.|+|++|++++++|++
T Consensus 129 ----------~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~ 196 (350)
T cd08256 129 ----------GMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARL 196 (350)
T ss_pred ----------cceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 99999999988 57899999999999988 7999999986 77899999999997779999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
+|+..++++++++++.+.++++|++++++..+ .++.+.+.+++++ ++|++|||.+....+..++++++++ |+++.
T Consensus 197 ~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~ 272 (350)
T cd08256 197 KNPKKLIVLDLKDERLALARKFGADVVLNPPE---VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVE 272 (350)
T ss_pred cCCcEEEEEcCCHHHHHHHHHcCCcEEecCCC---cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEE
Confidence 99856888888999999999999999998876 7788888888887 9999999999765588999999998 99999
Q ss_pred eccCCCCCcccccHHHH-HhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 241 LGVDQPGSQLSLSSFEV-LHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
+|.... ...+....+ ..+++++.++... ...+.+++++++++.+++.+.+.+.|+++++++|++.+++++..
T Consensus 273 ~g~~~~--~~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~ 346 (350)
T cd08256 273 FSVFGD--PVTVDWSIIGDRKELDVLGSHLG----PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSI 346 (350)
T ss_pred EccCCC--CCccChhHhhcccccEEEEeccC----chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCce
Confidence 986432 233333332 2456777776533 24688999999999887655467999999999999999987755
Q ss_pred EEEE
Q 020435 319 RCVI 322 (326)
Q Consensus 319 k~vv 322 (326)
|+++
T Consensus 347 kvv~ 350 (350)
T cd08256 347 KVVL 350 (350)
T ss_pred EEeC
Confidence 7764
No 49
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=6e-35 Score=267.71 Aligned_cols=282 Identities=29% Similarity=0.487 Sum_probs=236.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~ 85 (326)
.+|.++|+|++|+|+++|++++++++||+|++.+..+|+.|.+|+.+++++|....+ .+. ...|
T Consensus 53 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------ 117 (343)
T cd05285 53 KEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRF---AATPPVDG------------ 117 (343)
T ss_pred CCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCccc---cccccCCC------------
Confidence 467899999999999999999999999999999999999999999999999975432 111 1234
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+|++|++++++.++++|+++++++++.+ .++++|++++ +.++++++++|||+|+|++|++++|+|+.+|+.
T Consensus 118 -------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~ 188 (343)
T cd05285 118 -------TLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGAT 188 (343)
T ss_pred -------ceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 9999999999999999999999999877 5889999975 889999999999998899999999999999993
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccH---HHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSV---SQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~---~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.|+++++++++.+.++++|++++++.++ .++ .+.+++.+++ ++|++|||.+....++..+++++++ |+++.+
T Consensus 189 ~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~ 264 (343)
T cd05285 189 KVVVTDIDPSRLEFAKELGATHTVNVRT---EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLV 264 (343)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEecccc---ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEE
Confidence 4999998999999999999999998876 453 7778888777 8999999999875588999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc--eeE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK--CLR 319 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~--~~k 319 (326)
|.... ...+++.....+++.+.++... .+.++.++++++++.+.+.+.+.+.|+++++.+|++.+.+++ .+|
T Consensus 265 g~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 338 (343)
T cd05285 265 GMGKP--EVTLPLSAASLREIDIRGVFRY----ANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIK 338 (343)
T ss_pred ccCCC--CCccCHHHHhhCCcEEEEeccC----hHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeE
Confidence 86432 2344444556677887776422 257889999999997765555678999999999999998875 369
Q ss_pred EEE
Q 020435 320 CVI 322 (326)
Q Consensus 320 ~vv 322 (326)
++|
T Consensus 339 ~~~ 341 (343)
T cd05285 339 VVI 341 (343)
T ss_pred EEE
Confidence 987
No 50
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=8.3e-35 Score=266.56 Aligned_cols=285 Identities=24% Similarity=0.379 Sum_probs=236.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++++++||+|++.+..+|+.|.+|+.+++++|.+... .+...+|
T Consensus 56 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 119 (341)
T PRK05396 56 PVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVNRPG------------- 119 (341)
T ss_pred CCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeecCCC-------------
Confidence 468899999999999999999999999999999999999999999999999976543 3444445
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|+.++.+.++++|+++++++++.+ .++.++++++.. ...+|++|+|+|+|++|++++|+|++.|+.+
T Consensus 120 ------~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~ 190 (341)
T PRK05396 120 ------AFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARH 190 (341)
T ss_pred ------cceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCE
Confidence 9999999999999999999999888755 466777665543 3458999999988999999999999999856
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++++++++.+.++++|++++++..+ .++.+.+++++.+ ++|++|||.++...+..++++++++ |+++.+|...
T Consensus 191 v~~~~~~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 266 (341)
T PRK05396 191 VVITDVNEYRLELARKMGATRAVNVAK---EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPP 266 (341)
T ss_pred EEEEcCCHHHHHHHHHhCCcEEecCcc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCC
Confidence 888888899999999999999998877 6788888888876 9999999999877789999999998 9999998754
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEeC
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWMG 325 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~~ 325 (326)
. ..+++...+..+++++.++.... ..+.+..++++++++ +++.+.+.+.++++++++|++.+.+++..|++++++
T Consensus 267 ~--~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~~gk~vv~~~ 341 (341)
T PRK05396 267 G--DMAIDWNKVIFKGLTIKGIYGRE--MFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQSGKVILDWD 341 (341)
T ss_pred C--CCcccHHHHhhcceEEEEEEccC--ccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCCCceEEEecC
Confidence 2 23334456667788888765221 134567788899888 545555778999999999999998877459999875
No 51
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=7.9e-35 Score=269.34 Aligned_cols=308 Identities=31% Similarity=0.483 Sum_probs=245.8
Q ss_pred CCCcccCCceeEEEEEecCCCCC---ccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCC-CCCCCCccccccCC
Q 020435 7 VFPRILGHEAIGVVESVGENVDG---VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPW-MPRDQTSRFKDLRG 82 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~---~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~g~~~~~~~~~ 82 (326)
.+|.++|||++|+|+.+|++++. +++||+|++.+..+|+.|.+|..+.+++|.....+...+ -..+|.+.+....+
T Consensus 52 ~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (367)
T cd08263 52 PPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDG 131 (367)
T ss_pred CCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCC
Confidence 56889999999999999999988 999999999999999999999999999997654321111 01111000000000
Q ss_pred cccccc-cccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 83 ETIHHF-VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 83 ~~~~~~-~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
-+.+ ...|++++|+.++.+.++++|+++++++++.+++.++|||+++.....+.++++|||+|+|++|++++++|+.
T Consensus 132 --~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~ 209 (367)
T cd08263 132 --GPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKA 209 (367)
T ss_pred --CccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHH
Confidence 0000 1135999999999999999999999999999999999999988787888999999999889999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
.|+.+|++++.++++.+.++++|++.+++.++ .++.+.+++..++ ++|++|||+++......++++++++ |+++.
T Consensus 210 ~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~ 285 (367)
T cd08263 210 FGASPIIAVDVRDEKLAKAKELGATHTVNAAK---EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVV 285 (367)
T ss_pred cCCCeEEEEeCCHHHHHHHHHhCCceEecCCc---ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEE
Confidence 99844999988999999999999999999877 7788888888776 9999999999874488999999998 99999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
++.........++...++.++.++.+++... .++.++.++++++++.+.+...+++.++++++.++++.+++++.. |
T Consensus 286 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~ 363 (367)
T cd08263 286 VGLAPGGATAEIPITRLVRRGIKIIGSYGAR--PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGR 363 (367)
T ss_pred EccCCCCCccccCHHHHhhCCeEEEecCCCC--cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccce
Confidence 9865332334455555556788887754222 135688899999999887655567899999999999999988755 8
Q ss_pred EEE
Q 020435 320 CVI 322 (326)
Q Consensus 320 ~vv 322 (326)
+||
T Consensus 364 ~~~ 366 (367)
T cd08263 364 AIV 366 (367)
T ss_pred eee
Confidence 876
No 52
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=8.4e-35 Score=271.86 Aligned_cols=285 Identities=21% Similarity=0.236 Sum_probs=237.3
Q ss_pred cccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCcccccc
Q 020435 10 RILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETIHHF 88 (326)
Q Consensus 10 ~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~ 88 (326)
.++|||++|+|+++|++++.+++||+|++.+...|+.|.+|+.+++++|..... +|+. .+
T Consensus 79 ~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~---------------- 139 (398)
T TIGR01751 79 HIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF---------------- 139 (398)
T ss_pred eecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC----------------
Confidence 389999999999999999999999999999999999999999999999965442 3321 23
Q ss_pred cccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhh--hcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 89 VSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 89 ~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~--~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|+|+||++++++.++++|+++++++++.+.+.+.|||+++.. .+++.++++|+|+|+ |++|++++++|+++|+
T Consensus 140 ---g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~- 215 (398)
T TIGR01751 140 ---GSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG- 215 (398)
T ss_pred ---ccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-
Confidence 499999999999999999999999999999999999998654 477889999999997 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCC-------------------CccHHHHHHHhcCC-CccEEEEcCCcHHHHH
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCG-------------------DKSVSQIIIDMTDG-GADYCFECVGLASLVQ 225 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~-------------------~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~ 225 (326)
+++++++++++.+.++++|+++++|.++.. ...+.+.+.+++++ ++|++|||.|... +.
T Consensus 216 ~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~ 294 (398)
T TIGR01751 216 NPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FP 294 (398)
T ss_pred eEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HH
Confidence 888888899999999999999999875410 01255667778876 9999999999765 88
Q ss_pred HHHHHhhcCCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccH
Q 020435 226 EAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 305 (326)
Q Consensus 226 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i 305 (326)
..+++++++ |+++.+|.... ....++...++.++.++.++..+. ..++++++++++++.+.. .++++++++++
T Consensus 295 ~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~l~~~ 367 (398)
T TIGR01751 295 TSVFVCRRG-GMVVICGGTTG-YNHDYDNRYLWMRQKRIQGSHFAN---LREAWEANRLVAKGRIDP--TLSKVYPLEEI 367 (398)
T ss_pred HHHHhhccC-CEEEEEccccC-CCCCcCHHHHhhcccEEEccccCc---HHHHHHHHHHHHCCCccc--ceeeEEcHHHH
Confidence 999999998 99999987532 224455555666677787775433 245788999999997764 36789999999
Q ss_pred HHHHHHHHcCcee-EEEEEeC
Q 020435 306 NSAFDLLIKGKCL-RCVIWMG 325 (326)
Q Consensus 306 ~~a~~~~~~~~~~-k~vv~~~ 325 (326)
+++++.+.+++.. |+++.+.
T Consensus 368 ~~a~~~~~~~~~~gkvvv~~~ 388 (398)
T TIGR01751 368 GQAHQDVHRNHHQGNVAVLVL 388 (398)
T ss_pred HHHHHHHHcCCCCceEEEEeC
Confidence 9999999988765 9998864
No 53
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=1e-34 Score=266.83 Aligned_cols=285 Identities=26% Similarity=0.354 Sum_probs=240.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++++++||+|++.+...|+.|.+|..++++.|....+ .|....|
T Consensus 65 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 128 (350)
T cd08240 65 KLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIFQDG------------- 128 (350)
T ss_pred CCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeeeccC-------------
Confidence 457899999999999999999999999999999999999999999999999977654 3433444
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
++++|+.++.+.++++|+++++++++++.+.+.|||+++.......++++|||+|+|++|++++|+|+..|+++
T Consensus 129 ------~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~ 202 (350)
T cd08240 129 ------GYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPAN 202 (350)
T ss_pred ------cceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCe
Confidence 99999999999999999999999999999999999998776666678999999988999999999999999967
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
|+++++++++.+.++++|++.+++.++ .++.+.+.+..++++|++||+.|.......++++|+++ |+++.++....
T Consensus 203 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~ 278 (350)
T cd08240 203 IIVVDIDEAKLEAAKAAGADVVVNGSD---PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGG 278 (350)
T ss_pred EEEEeCCHHHHHHHHHhCCcEEecCCC---ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCC
Confidence 889998999999999999988888776 66777777776558999999999766689999999998 99999987543
Q ss_pred CCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEEEe
Q 020435 247 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 324 (326)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv~~ 324 (326)
. ..........+++++.++.... .+++.+++++++++.++.. ....|+++++++|++.+..++.. |+++++
T Consensus 279 ~--~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 279 E--ATLPLPLLPLRALTIQGSYVGS---LEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred C--CcccHHHHhhcCcEEEEcccCC---HHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 2 2233333445788888876443 3678899999999977643 45789999999999999887765 888753
No 54
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=4.4e-35 Score=268.82 Aligned_cols=260 Identities=20% Similarity=0.268 Sum_probs=215.6
Q ss_pred CCCcccCC--ceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 7 VFPRILGH--EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 7 ~~p~i~G~--e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
.+|.++|+ |++|+|..+|+++++|++||+|...
T Consensus 71 ~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~--------------------------------------------- 105 (348)
T PLN03154 71 LPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGI--------------------------------------------- 105 (348)
T ss_pred CCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence 46899998 8899999999999999999999531
Q ss_pred cccccccccccceEEecccc--eEE--cCCCCCcc-ccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHH
Q 020435 85 IHHFVSVSSFSEYTVLDIAH--VVK--VDPTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEG 158 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~--~~~--ip~~~s~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~l 158 (326)
|+|+||+.++.+. +.+ +|++++++ +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+
T Consensus 106 -------~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiql 178 (348)
T PLN03154 106 -------TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQL 178 (348)
T ss_pred -------CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHH
Confidence 2899999998753 544 59999986 688899999999998888889999999999997 9999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHH-hcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 159 ARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
||++|+ +|+++++++++.+.++ ++|+++++++.+ ..++.+.+++.+++++|++|||+|+.. +..++++++++ |+
T Consensus 179 Ak~~G~-~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvD~v~d~vG~~~-~~~~~~~l~~~-G~ 253 (348)
T PLN03154 179 AKLHGC-YVVGSAGSSQKVDLLKNKLGFDEAFNYKE--EPDLDAALKRYFPEGIDIYFDNVGGDM-LDAALLNMKIH-GR 253 (348)
T ss_pred HHHcCC-EEEEEcCCHHHHHHHHHhcCCCEEEECCC--cccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHHhccC-CE
Confidence 999999 8999999999999987 799999999864 136777888877669999999999865 89999999998 99
Q ss_pred EEEeccCCCCCc----ccccHHHHHhcCCEEEeeeccCCC--CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHH
Q 020435 238 TIVLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDL 311 (326)
Q Consensus 238 ~v~~g~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~ 311 (326)
++.+|....... ..++...++.+++++.+++...+. ..+.++++++++++|++++. ++.+|+++++++|++.
T Consensus 254 iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~--~~~~~~L~~~~~A~~~ 331 (348)
T PLN03154 254 IAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYI--EDMSEGLESAPAALVG 331 (348)
T ss_pred EEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCc--eecccCHHHHHHHHHH
Confidence 999997532211 112445667789999988644321 12357789999999977643 6678999999999999
Q ss_pred HHcCcee-EEEEEeC
Q 020435 312 LIKGKCL-RCVIWMG 325 (326)
Q Consensus 312 ~~~~~~~-k~vv~~~ 325 (326)
+.+++.. |+||++.
T Consensus 332 l~~g~~~GKvVl~~~ 346 (348)
T PLN03154 332 LFSGKNVGKQVIRVA 346 (348)
T ss_pred HHcCCCCceEEEEec
Confidence 9998876 9999875
No 55
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=1.7e-34 Score=264.83 Aligned_cols=286 Identities=28% Similarity=0.419 Sum_probs=238.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++++++||+|++.+..+|+.|.+|..++.+.|....+ ++...+|
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 115 (345)
T cd08287 52 RAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAFVDG------------- 115 (345)
T ss_pred CCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCc---ccCCCCC-------------
Confidence 358899999999999999999999999999886778899999999999999987654 5555556
Q ss_pred cccccccccceEEeccc--ceEEcCCCCCccccc-----cccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHH
Q 020435 87 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRAC-----LLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGA 159 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa-----~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la 159 (326)
+|++|+.++.+ .++++|++++++.+. ++.+.++|||+++ ..++++++++|+|+|+|++|++++|+|
T Consensus 116 ------~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~la 188 (345)
T cd08287 116 ------GQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAA 188 (345)
T ss_pred ------ceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 99999999875 999999999983222 2235788999975 567899999999998899999999999
Q ss_pred HHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEE
Q 020435 160 RLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKT 238 (326)
Q Consensus 160 ~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 238 (326)
++.|+..++++++++++.+.++++|+++++++.. .++.+.+.+.+++ ++|+++||.++...+..++++++++ |++
T Consensus 189 k~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~---~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~ 264 (345)
T cd08287 189 KRLGAERIIAMSRHEDRQALAREFGATDIVAERG---EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRV 264 (345)
T ss_pred HHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc---ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEE
Confidence 9999855889988888888999999999999887 7788888888877 9999999999877789999999998 999
Q ss_pred EEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 239 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
+.++.... ...++....+.+++++.++... ..+.+++++++++++.+++..++++.++++++++|++.+.+.+..
T Consensus 265 v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~ 339 (345)
T cd08287 265 GYVGVPHG--GVELDVRELFFRNVGLAGGPAP---VRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI 339 (345)
T ss_pred EEecccCC--CCccCHHHHHhcceEEEEecCC---cHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce
Confidence 99986542 3445554456678888775322 235789999999999887665567899999999999999887777
Q ss_pred EEEEEe
Q 020435 319 RCVIWM 324 (326)
Q Consensus 319 k~vv~~ 324 (326)
|++|++
T Consensus 340 k~~~~~ 345 (345)
T cd08287 340 KVLLRP 345 (345)
T ss_pred EEEeCC
Confidence 999863
No 56
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.9e-34 Score=264.41 Aligned_cols=289 Identities=28% Similarity=0.395 Sum_probs=237.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++++++||+|++.+..+|+.|.+|..++++.|..... .|.. +
T Consensus 52 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~------------- 113 (344)
T cd08284 52 TPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA--G------------- 113 (344)
T ss_pred CCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc--c-------------
Confidence 457899999999999999999999999999998889999999999999999976542 2110 0
Q ss_pred cccccccccceEEeccc--ceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 020435 87 HFVSVSSFSEYTVLDIA--HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 164 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~--~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~ 164 (326)
.....|+|++|+.++++ .++++|+++++++++++++.++|||+++. ..++.++++|||+|+|.+|++++++|+..|+
T Consensus 114 ~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~ 192 (344)
T cd08284 114 SPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGA 192 (344)
T ss_pred cCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 00112499999999865 99999999999999999999999999864 4788999999999889999999999999996
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.+|+++++++++.+.++++|+. .++.+. .++.+.+.+++++ ++|++|||.++.......+++++++ |+++.+|.
T Consensus 193 ~~v~~~~~~~~~~~~~~~~g~~-~~~~~~---~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~ 267 (344)
T cd08284 193 ARVFAVDPVPERLERAAALGAE-PINFED---AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGV 267 (344)
T ss_pred ceEEEEcCCHHHHHHHHHhCCe-EEecCC---cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECc
Confidence 4799998888899888999975 466655 5678888888876 9999999999876689999999998 99999987
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEE
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIW 323 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~ 323 (326)
... ..........+.+++++.... ....+.++.++++++++.+++..++++.+++++++++++.+.+++..|++++
T Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~k~Vi~ 343 (344)
T cd08284 268 HTA-EEFPFPGLDAYNKNLTLRFGR---CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKVLKVVLD 343 (344)
T ss_pred CCC-CCccccHHHHhhcCcEEEEec---CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCceEEEec
Confidence 542 233344445566788776542 1235679999999999988765556789999999999999887665788875
No 57
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=2.1e-34 Score=263.11 Aligned_cols=283 Identities=31% Similarity=0.486 Sum_probs=242.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|+|++|+|+++|++++.+++||+|++.+..+|+.|.+|+.++.++|..... .|+..+|
T Consensus 54 ~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------ 118 (338)
T cd08254 54 TKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLGIDG------------ 118 (338)
T ss_pred CCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccccCC------------
Confidence 3568899999999999999999999999999999999999999999999999966543 4555555
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+|++|+.++.+.++++|+++++++++.++.+++|||+++....+++++++|||.|+|.+|++++++|+..|+
T Consensus 119 -------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~- 190 (338)
T cd08254 119 -------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA- 190 (338)
T ss_pred -------cceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-
Confidence 999999999999999999999999999999999999988888889999999998889999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++++++..+ ....+.+ +.+.+ ++|+++||.+....+..++++|+++ |+++.++..
T Consensus 191 ~V~~~~~s~~~~~~~~~~g~~~~~~~~~---~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~ 265 (338)
T cd08254 191 AVIAVDIKEEKLELAKELGADEVLNSLD---DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLG 265 (338)
T ss_pred EEEEEcCCHHHHHHHHHhCCCEEEcCCC---cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCC
Confidence 8999999999999999999999888776 5566666 55555 9999999998776689999999998 999999864
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEEE
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 323 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv~ 323 (326)
. ....++...++.++.++.+++.. ..+.+..++++++++.+++. .+.+++++++++++.+.+++.. |++++
T Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 337 (338)
T cd08254 266 R--DKLTVDLSDLIARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKVKGRVVLV 337 (338)
T ss_pred C--CCCccCHHHHhhCccEEEEeccC---CHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCccceEEEe
Confidence 3 23445556667778888876532 24578889999999987754 3789999999999999988776 98886
Q ss_pred e
Q 020435 324 M 324 (326)
Q Consensus 324 ~ 324 (326)
+
T Consensus 338 ~ 338 (338)
T cd08254 338 P 338 (338)
T ss_pred C
Confidence 4
No 58
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=2.5e-34 Score=265.65 Aligned_cols=285 Identities=27% Similarity=0.457 Sum_probs=231.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMP-RDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~ 85 (326)
.+|.++|||++|+|+++|+++++|++||+|++.+..+|+.|..|+.+.++.|..... ++.. .+|
T Consensus 72 ~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~~g------------ 136 (364)
T PLN02702 72 KEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPVHG------------ 136 (364)
T ss_pred CCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCCCC------------
Confidence 368899999999999999999999999999999999999999999999999976432 2211 234
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
+|+||++++...++++|++++++++++.. +++++|+++ +..++.++++|||+|+|++|++++++|++.|+.
T Consensus 137 -------~~~~y~~v~~~~~~~~P~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~ 207 (364)
T PLN02702 137 -------SLANQVVHPADLCFKLPENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAP 207 (364)
T ss_pred -------cccceEEcchHHeEECCCCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999887632 566688865 778899999999998899999999999999986
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHh---cCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM---TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~---~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.|+++++++++.+.++++|++++++... ...++.+.+.++ +++++|++|||.++...+..++++++++ |+++.+|
T Consensus 208 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g 285 (364)
T PLN02702 208 RIVIVDVDDERLSVAKQLGADEIVLVST-NIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVG 285 (364)
T ss_pred EEEEECCCHHHHHHHHHhCCCEEEecCc-ccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEc
Confidence 6888888889999999999988876532 114566666554 2338999999999766689999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeecc--ccHHHHHHHHHcCcee-E
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKF--EEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l--~~i~~a~~~~~~~~~~-k 319 (326)
.... ...+....+..+++++.+++.. ..+++.++++++++.+++.+.+++.|++ +++++|++.+.+++.. |
T Consensus 286 ~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~k 359 (364)
T PLN02702 286 MGHN--EMTVPLTPAAAREVDVVGVFRY----RNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIK 359 (364)
T ss_pred cCCC--CCcccHHHHHhCccEEEEeccC----hHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCCCceE
Confidence 6432 2344555667788998887532 3578889999999988766567788555 7999999999887654 9
Q ss_pred EEEE
Q 020435 320 CVIW 323 (326)
Q Consensus 320 ~vv~ 323 (326)
+++.
T Consensus 360 vv~~ 363 (364)
T PLN02702 360 VMFN 363 (364)
T ss_pred EEEe
Confidence 9885
No 59
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=3.3e-35 Score=265.34 Aligned_cols=251 Identities=18% Similarity=0.209 Sum_probs=196.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|+++|||++|+|+++|+++ .|++||||++. |..|.+|.. + ..
T Consensus 57 ~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~----~~~c~~~~~---------------~--~~-------------- 100 (308)
T TIGR01202 57 GYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVP----GSNCYEDVR---------------G--LF-------------- 100 (308)
T ss_pred CCCccCcceeEEEEEEecCCC-CCCCCCEEEEe----Ccccccccc---------------c--cC--------------
Confidence 579999999999999999998 69999999873 223333210 0 12
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
|+|+||+.++++.++++|++++++. ++++ +++|||+++.+ . ..++++|||+|+|++|++++|+||++|++.
T Consensus 101 -----G~~aey~~v~~~~~~~ip~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~ 171 (308)
T TIGR01202 101 -----GGASKRLVTPASRVCRLDPALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSP 171 (308)
T ss_pred -----CcccceEEcCHHHceeCCCCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCce
Confidence 3999999999999999999999764 5554 57899997644 3 336889999999999999999999999955
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
|++++.++++++.++.+ +++|+.+ . .+.++|+||||+|++..+..++++++++ |+++++|...
T Consensus 172 v~~~~~~~~rl~~a~~~---~~i~~~~---~---------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~- 234 (308)
T TIGR01202 172 PAVWETNPRRRDGATGY---EVLDPEK---D---------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYT- 234 (308)
T ss_pred EEEeCCCHHHHHhhhhc---cccChhh---c---------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecC-
Confidence 66777776676655443 4555432 1 1238999999999987789999999998 9999999753
Q ss_pred CCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce-eEEEEE
Q 020435 247 GSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC-LRCVIW 323 (326)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~-~k~vv~ 323 (326)
....+++..++.|++++.++... ..++++++++++++|++++++++++.|+++++++|++.+.++.. +|++|+
T Consensus 235 -~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 235 -EPVNFDFVPAFMKEARLRIAAEW---QPGDLHAVRELIESGALSLDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred -CCcccccchhhhcceEEEEeccc---chhHHHHHHHHHHcCCCChhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 23455555667788888877532 24679999999999999988889999999999999998876544 598874
No 60
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=2.1e-34 Score=263.53 Aligned_cols=287 Identities=23% Similarity=0.371 Sum_probs=233.6
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEe-ecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVI-PHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 82 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 82 (326)
+...+|.++|||++|+|+++|+++++|++||+|+ ......|++|.+|+.+++++|...... ..|
T Consensus 49 ~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------------- 113 (337)
T cd05283 49 GPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVT-YNG-------------- 113 (337)
T ss_pred CCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhc-ccc--------------
Confidence 3445699999999999999999999999999997 445568999999999999999775431 001
Q ss_pred cccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHc
Q 020435 83 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC 162 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~ 162 (326)
++.-++...|+|+||++++.+.++++|+++++++++.+.+.+.|||+++ ...+++++++++|.|+|++|++++++|+..
T Consensus 114 ~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~ 192 (337)
T cd05283 114 KYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKAL 192 (337)
T ss_pred cccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHc
Confidence 0001112234999999999999999999999999999999999999975 445689999999988899999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+ +|+.+++++++.+.++++|++++++..+ .++.+. .++++|++|||++.......++++++++ |+++.+|
T Consensus 193 G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g 263 (337)
T cd05283 193 GA-EVTAFSRSPSKKEDALKLGADEFIATKD---PEAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVG 263 (337)
T ss_pred CC-eEEEEcCCHHHHHHHHHcCCcEEecCcc---hhhhhh----ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEe
Confidence 99 9999999999999999999999988765 333221 2348999999999875588999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEE
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV 321 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~v 321 (326)
.... ...++...++.+++++.++.... .++++.++++++++++++ .+ +.|+++++++||+.+.+++.. |+|
T Consensus 264 ~~~~--~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~~k~v 335 (337)
T cd05283 264 APEE--PLPVPPFPLIFGRKSVAGSLIGG---RKETQEMLDFAAEHGIKP--WV-EVIPMDGINEALERLEKGDVRYRFV 335 (337)
T ss_pred ccCC--CCccCHHHHhcCceEEEEecccC---HHHHHHHHHHHHhCCCcc--ce-EEEEHHHHHHHHHHHHcCCCcceEe
Confidence 7532 22556666667899999886543 467999999999997654 34 789999999999999998875 888
Q ss_pred EE
Q 020435 322 IW 323 (326)
Q Consensus 322 v~ 323 (326)
++
T Consensus 336 ~~ 337 (337)
T cd05283 336 LD 337 (337)
T ss_pred eC
Confidence 74
No 61
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=3.1e-34 Score=262.45 Aligned_cols=280 Identities=25% Similarity=0.399 Sum_probs=229.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-----CCCCCccccccC
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-----PRDQTSRFKDLR 81 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-----~~~g~~~~~~~~ 81 (326)
.+|.++|||++|+|+++|+++++|++||+|++.+..+|++|.+|..++.++|....+ ++. ..+|
T Consensus 52 ~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~g-------- 120 (339)
T cd08232 52 REPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRFPHVQG-------- 120 (339)
T ss_pred cCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCccccc---eeeccccCCCCC--------
Confidence 467899999999999999999999999999999999999999999999999987543 221 1234
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
+|++|++++.+.++++|+++++++|+. ..+++|||+++.+.... ++++|||.|+|.+|++++|+|+.
T Consensus 121 -----------~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~ 187 (339)
T cd08232 121 -----------GFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARR 187 (339)
T ss_pred -----------ceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHH
Confidence 999999999999999999999999876 46888999987665556 89999999889999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhc-CC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT-DG-GADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~-~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
+|..+|+++++++++.+.++++|++++++.++ .++ .+.. .. ++|++|||.+....+...+++|+++ |+++
T Consensus 188 ~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~---~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v 259 (339)
T cd08232 188 AGAAEIVATDLADAPLAVARAMGADETVNLAR---DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVV 259 (339)
T ss_pred cCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc---hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEE
Confidence 99867899998889888889999999998765 332 2222 23 7999999999765588999999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
.++... .....++..++.+++++.+... ..+++++++++++++.+++...+++.|++++++++++.+..++..
T Consensus 260 ~~g~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~g 333 (339)
T cd08232 260 QVGMLG--GPVPLPLNALVAKELDLRGSFR----FDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSV 333 (339)
T ss_pred EEecCC--CCccCcHHHHhhcceEEEEEec----CHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCCCce
Confidence 998543 2233344444567788877642 235788999999999887666677899999999999999877655
Q ss_pred EEEEEe
Q 020435 319 RCVIWM 324 (326)
Q Consensus 319 k~vv~~ 324 (326)
|+++++
T Consensus 334 kvvv~~ 339 (339)
T cd08232 334 KVQLSF 339 (339)
T ss_pred eEEEeC
Confidence 999864
No 62
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=7.1e-34 Score=263.61 Aligned_cols=293 Identities=25% Similarity=0.347 Sum_probs=235.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++.+++||+|++.++.+|+.|..|+.+++++|.... .++.... .
T Consensus 52 ~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~----~~~~~~~------------~ 115 (375)
T cd08282 52 EPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVN----PGRAGGA------------Y 115 (375)
T ss_pred CCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCC----ccccccc------------c
Confidence 46899999999999999999999999999999999999999999999999997532 1110000 0
Q ss_pred ccc----ccccccceEEeccc--ceEEcCCCCCcc---ccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHH
Q 020435 87 HFV----SVSSFSEYTVLDIA--HVVKVDPTVPPN---RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAE 157 (326)
Q Consensus 87 ~~~----~~g~~a~~~~v~~~--~~~~ip~~~s~~---~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~ 157 (326)
+++ ..|+|+||++++.. .++++|++++++ .++.+...++|||+++ ..++++++++|+|+|+|++|++++|
T Consensus 116 ~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~ 194 (375)
T cd08282 116 GYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAY 194 (375)
T ss_pred cccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHH
Confidence 011 02499999999976 899999999998 5677888999999987 7889999999999988999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHH-----------HHHH
Q 020435 158 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS-----------LVQE 226 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~-----------~~~~ 226 (326)
+|++.|+.+|+++++++++.+.++++|+ ..+++.+ .++.+.+++++++++|++|||.+... .+..
T Consensus 195 ~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~v~~~~---~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~ 270 (375)
T cd08282 195 SAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSD---GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQ 270 (375)
T ss_pred HHHHcCCCEEEEECCCHHHHHHHHHcCC-eEeccCc---ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHH
Confidence 9999997578889999999999999998 4566665 67788888877668999999998762 3788
Q ss_pred HHHHhhcCCcEEEEeccCCCC-----------CcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcc
Q 020435 227 AYACCRKGWGKTIVLGVDQPG-----------SQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKF 295 (326)
Q Consensus 227 ~~~~l~~~~G~~v~~g~~~~~-----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 295 (326)
++++++++ |+++.+|..... ....++...++.++..+.++.. ..++.+..++++++++++++..+
T Consensus 271 ~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~l~~~~~ 346 (375)
T cd08282 271 LIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQA---PVKKYNRQLRDLILAGRAKPSFV 346 (375)
T ss_pred HHHHhhcC-cEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecC---CchhhHHHHHHHHHcCCCChHHc
Confidence 99999998 999988764311 1234455566666777666532 12456888999999998876555
Q ss_pred eeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 296 VTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 296 i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
+++.++++++++|++.+.+++..|+++++
T Consensus 347 ~~~~~~l~~~~~a~~~~~~~~~~kvvv~~ 375 (375)
T cd08282 347 VSHVISLEDAPEAYARFDKRLETKVVIKP 375 (375)
T ss_pred EEEEeeHHHHHHHHHHHhcCCceEEEeCC
Confidence 78999999999999999988844998753
No 63
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=1.1e-33 Score=258.83 Aligned_cols=282 Identities=27% Similarity=0.423 Sum_probs=234.5
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.|.++|||++|+|+++|+++++|++||+|++.+. ..|+.|.+|..+.+++|..... .|+..+|
T Consensus 53 ~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 116 (338)
T PRK09422 53 TGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYTVDG------------- 116 (338)
T ss_pred CCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccc---cCccccC-------------
Confidence 4789999999999999999999999999987554 5799999999999999987664 5555556
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH-cCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL-CGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~-~g~~ 165 (326)
+++||+.++.+.++++|+++++++++++++.+.|||+++ +.++++++++|||+|+|++|++++++|+. .|+
T Consensus 117 ------~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~- 188 (338)
T PRK09422 117 ------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA- 188 (338)
T ss_pred ------cceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-
Confidence 999999999999999999999999999999999999986 77889999999999999999999999998 599
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+|+++++++++.+.++++|++.+++... ..++.+.+++.++ ++|.++.+.++...+..++++++++ |+++.+|...
T Consensus 189 ~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~ 264 (338)
T PRK09422 189 KVIAVDINDDKLALAKEVGADLTINSKR--VEDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPP 264 (338)
T ss_pred eEEEEeCChHHHHHHHHcCCcEEecccc--cccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCC
Confidence 8999999999999999999999988742 1456677777766 7896655555555599999999998 9999998642
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEEEe
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIWM 324 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv~~ 324 (326)
....++...+..+..++.++.... .++++.++++++++.++. .+ ..++++++++|++.+.+++.. |+++++
T Consensus 265 --~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~g~l~~--~v-~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 336 (338)
T PRK09422 265 --ESMDLSIPRLVLDGIEVVGSLVGT---RQDLEEAFQFGAEGKVVP--KV-QLRPLEDINDIFDEMEQGKIQGRMVIDF 336 (338)
T ss_pred --CCceecHHHHhhcCcEEEEecCCC---HHHHHHHHHHHHhCCCCc--cE-EEEcHHHHHHHHHHHHcCCccceEEEec
Confidence 234445555566778887765332 357889999999997653 35 568999999999999988776 998876
Q ss_pred C
Q 020435 325 G 325 (326)
Q Consensus 325 ~ 325 (326)
.
T Consensus 337 ~ 337 (338)
T PRK09422 337 T 337 (338)
T ss_pred C
Confidence 4
No 64
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=6.7e-34 Score=259.70 Aligned_cols=283 Identities=27% Similarity=0.409 Sum_probs=234.2
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 82 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 82 (326)
+|..++|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|.+|..++++.|..... +|...+|
T Consensus 49 ~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g--------- 116 (334)
T PRK13771 49 YPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEELDG--------- 116 (334)
T ss_pred CCCCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccc---cccccCc---------
Confidence 4445678899999999999999999899999999998888999999999999999988664 4544455
Q ss_pred cccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHH
Q 020435 83 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARL 161 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~ 161 (326)
+|++|+.++.+.++++|+++++++++.+++.+.+||+++... +++++++|+|+|+ |.+|++++++|+.
T Consensus 117 ----------~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~ 185 (334)
T PRK13771 117 ----------FFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKA 185 (334)
T ss_pred ----------eeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999986554 8899999999987 9999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.|+ +|+++++++++.+.++++ ++++++.+ ++.+.++++ +++|++|||.++.. ...++++++++ |+++.+
T Consensus 186 ~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~v~~~--~~~d~~ld~~g~~~-~~~~~~~l~~~-G~~v~~ 254 (334)
T PRK13771 186 LGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-----KFSEEVKKI--GGADIVIETVGTPT-LEESLRSLNMG-GKIIQI 254 (334)
T ss_pred cCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-----hHHHHHHhc--CCCcEEEEcCChHH-HHHHHHHHhcC-CEEEEE
Confidence 999 899999999999988888 77666543 345556654 37999999999876 88999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
|...............+.+++++.++.. ..+++++.++++++++.++. .+.+.++++++++|++.+.++... |+
T Consensus 255 g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 329 (334)
T PRK13771 255 GNVDPSPTYSLRLGYIILKDIEIIGHIS---ATKRDVEEALKLVAEGKIKP--VIGAEVSLSEIDKALEELKDKSRIGKI 329 (334)
T ss_pred eccCCCCCcccCHHHHHhcccEEEEecC---CCHHHHHHHHHHHHcCCCcc--eEeeeEcHHHHHHHHHHHHcCCCcceE
Confidence 9753322212333333456888887642 23567899999999997653 366899999999999999887655 88
Q ss_pred EEEe
Q 020435 321 VIWM 324 (326)
Q Consensus 321 vv~~ 324 (326)
++.+
T Consensus 330 v~~~ 333 (334)
T PRK13771 330 LVKP 333 (334)
T ss_pred EEec
Confidence 8864
No 65
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=1.6e-33 Score=257.90 Aligned_cols=283 Identities=29% Similarity=0.453 Sum_probs=242.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecC-CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHF-LADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..|.++|||++|+|+++|++++.+++||+|+..+ ...|+.|.+|..+++++|..... .|+...|
T Consensus 55 ~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------ 119 (341)
T cd08297 55 KLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYTVDG------------ 119 (341)
T ss_pred CCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccc---cccccCC------------
Confidence 4577899999999999999999999999998765 46799999999999999988765 5665556
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
++++|+.++++.++++|+++++++++.+++.+.|||+++.. .+++++++|||+|+ +.+|++++++|++.|+
T Consensus 120 -------~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~ 191 (341)
T cd08297 120 -------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL 191 (341)
T ss_pred -------cceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC
Confidence 99999999999999999999999999999999999997655 58999999999987 6799999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+++.+++++.+.++++|+++++++.+ .++.+.+.+.+++ ++|++|||.++......++++++++ |+++.+|.
T Consensus 192 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~ 266 (341)
T cd08297 192 -RVIAIDVGDEKLELAKELGADAFVDFKK---SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGL 266 (341)
T ss_pred -eEEEEeCCHHHHHHHHHcCCcEEEcCCC---ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecC
Confidence 9999999999999998999999998877 6788888888876 9999999887766688999999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEE
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv 322 (326)
.. ....+++...++.++.++.++.... .++++.++++++++.+.+ .+ ..|++++++++++.+..+... |+++
T Consensus 267 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi 339 (341)
T cd08297 267 PP-GGFIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGKIAGRVVV 339 (341)
T ss_pred CC-CCCCCCCHHHHHhcccEEEEeccCC---HHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCCccceEEE
Confidence 53 2334556666667888888864332 367899999999997754 34 679999999999999987765 9988
Q ss_pred Ee
Q 020435 323 WM 324 (326)
Q Consensus 323 ~~ 324 (326)
++
T Consensus 340 ~~ 341 (341)
T cd08297 340 DF 341 (341)
T ss_pred eC
Confidence 75
No 66
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=6.1e-34 Score=259.03 Aligned_cols=259 Identities=16% Similarity=0.177 Sum_probs=213.1
Q ss_pred CCCCcccCCceeEEEEEecCCCCC-ccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~-~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
..+|.++|||++|+|+++|+++++ |++||+|++.+. .+|
T Consensus 58 ~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~-----------------------------~~g----------- 97 (324)
T cd08291 58 KALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-----------------------------SYG----------- 97 (324)
T ss_pred CCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-----------------------------CCC-----------
Confidence 457899999999999999999996 999999975311 023
Q ss_pred cccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEE-c-cCHHHHHHHHHHHHc
Q 020435 85 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIF-G-LGSIGLAVAEGARLC 162 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~-G-ag~~G~~a~~la~~~ 162 (326)
+|+||+.++++.++++|+++++++++++++.+.|||. +.+..+. ++++++|+ | +|++|++++|+|+++
T Consensus 98 --------~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~ 167 (324)
T cd08291 98 --------TYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKAD 167 (324)
T ss_pred --------cchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHc
Confidence 9999999999999999999999999988888899986 4555555 56666666 5 599999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
|+ +|+++++++++.+.++++|+++++++.+ .++.+.+++.+++ ++|++|||+|+.. ....+.+++++ |+++.+
T Consensus 168 G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~-G~~v~~ 241 (324)
T cd08291 168 GI-KVINIVRRKEQVDLLKKIGAEYVLNSSD---PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG-STLYVY 241 (324)
T ss_pred CC-EEEEEeCCHHHHHHHHHcCCcEEEECCC---ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC-CEEEEE
Confidence 99 8999999999999999999999999887 7888899998887 9999999999987 67889999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCC---CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
|.........++...++.+++++.+++..... ..+++++++++++ +. +++.++++|+++++.+|++.+.+++..
T Consensus 242 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~ 318 (324)
T cd08291 242 GYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TE--LKTTFASRYPLALTLEAIAFYSKNMST 318 (324)
T ss_pred EecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cc--cccceeeEEcHHHHHHHHHHHHhCCCC
Confidence 86433222235555667789999888754432 1235778888887 64 456688999999999999999987665
Q ss_pred -EEEEE
Q 020435 319 -RCVIW 323 (326)
Q Consensus 319 -k~vv~ 323 (326)
|+++.
T Consensus 319 Gkvv~~ 324 (324)
T cd08291 319 GKKLLI 324 (324)
T ss_pred CeEEeC
Confidence 98873
No 67
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=1.9e-33 Score=256.70 Aligned_cols=285 Identities=22% Similarity=0.344 Sum_probs=241.5
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+.+|++++.+++||+|++.++.+|+.|.+|..+.+++|..... +|....|
T Consensus 55 ~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~g------------ 119 (342)
T cd08266 55 LPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEHVDG------------ 119 (342)
T ss_pred CCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhccccccccccccc---cccccCc------------
Confidence 3568899999999999999999999999999999999999999999999999987543 5655555
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
++++|+.++.+.++++|+++++++++.+++.+.+||+++.+..++.++++++|+|+ +.+|++++++++..|+
T Consensus 120 -------~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~ 192 (342)
T cd08266 120 -------GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA 192 (342)
T ss_pred -------ceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999998888889999999999987 7999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+.+++++++.+.++.++.+.+++..+ .++.+.+.+.+.+ ++|+++++.+... +...+++++++ |+++.++.
T Consensus 193 -~v~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~g~~~-~~~~~~~l~~~-G~~v~~~~ 266 (342)
T cd08266 193 -TVIATAGSEDKLERAKELGADYVIDYRK---EDFVREVRELTGKRGVDVVVEHVGAAT-WEKSLKSLARG-GRLVTCGA 266 (342)
T ss_pred -EEEEEeCCHHHHHHHHHcCCCeEEecCC---hHHHHHHHHHhCCCCCcEEEECCcHHH-HHHHHHHhhcC-CEEEEEec
Confidence 8999999999888888888877887665 6677777777766 9999999999876 88999999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEE
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv 322 (326)
... ....++....+.+++++.+..... ..++..++++++++.+.+ .+++.|+++++++|++.+.++... |+++
T Consensus 267 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 340 (342)
T cd08266 267 TTG-YEAPIDLRHVFWRQLSILGSTMGT---KAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESREQFGKIVL 340 (342)
T ss_pred CCC-CCCCcCHHHHhhcceEEEEEecCC---HHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCCCCceEEE
Confidence 532 233444444456688887775332 346888999999997654 467899999999999999887665 8887
Q ss_pred Ee
Q 020435 323 WM 324 (326)
Q Consensus 323 ~~ 324 (326)
++
T Consensus 341 ~~ 342 (342)
T cd08266 341 TP 342 (342)
T ss_pred eC
Confidence 63
No 68
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=2.1e-33 Score=254.91 Aligned_cols=268 Identities=24% Similarity=0.374 Sum_probs=225.3
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCcccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETIH 86 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~ 86 (326)
+|.++|||++|+|+++|++ +++||+|...+..+|++|.+|+.+..+.|..... .++ ..+|
T Consensus 50 ~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~g------------- 110 (319)
T cd08242 50 FPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRDG------------- 110 (319)
T ss_pred CCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCCC-------------
Confidence 6889999999999999997 6799999999999999999999999998877654 443 2345
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|++++.+.++++|++++.++++.+ .++.++|+ +.+..+++++++|||+|+|.+|++++|+|+.+|+ +
T Consensus 111 ------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~ 181 (319)
T cd08242 111 ------AFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-D 181 (319)
T ss_pred ------ceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-e
Confidence 9999999999999999999999888864 35666776 5577889999999999889999999999999999 7
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|++++.++++.+.++++|++.+++..+ . +.+ ++|++|||.|+...+..++++++++ |+++..+...
T Consensus 182 vi~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~ 248 (319)
T cd08242 182 VVLVGRHSEKLALARRLGVETVLPDEA---E---------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYA 248 (319)
T ss_pred EEEEcCCHHHHHHHHHcCCcEEeCccc---c---------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC
Confidence 999999999999999999988877654 1 233 8999999999866688999999998 9999876532
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
....++...+..++.++.+++.+ .+++++++++++++++.+.+++.|+++++++|++.+.++...|+++++
T Consensus 249 --~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~k~vi~~ 319 (319)
T cd08242 249 --GPASFDLTKAVVNEITLVGSRCG------PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPGALKVLLRP 319 (319)
T ss_pred --CCCccCHHHheecceEEEEEecc------cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCCceEEEeCC
Confidence 33455666666778888877532 388899999999887666678999999999999999877656998864
No 69
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=2.7e-33 Score=256.51 Aligned_cols=285 Identities=25% Similarity=0.439 Sum_probs=235.9
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
++|.++|+|++|+|+++|++++++++||+|+..+...|+.|..|..+..+.|...+. .++...|
T Consensus 54 ~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 117 (340)
T TIGR00692 54 KPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVDTDG------------- 117 (340)
T ss_pred CCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcce---EeecCCC-------------
Confidence 457799999999999999999999999999999999999999999999999988764 3443445
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|++++++.++++|++++++++ +++.++.+|++++ .....++++|+|.|+|++|++++|+|+.+|+..
T Consensus 118 ------~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~ 188 (340)
T TIGR00692 118 ------CFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYP 188 (340)
T ss_pred ------cceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 9999999999999999999998655 5666889998875 345678999999888999999999999999834
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++++++++.+.++++|++++++..+ .++.+.+.+++++ ++|++|||.++...+...+++++++ |+++.+|...
T Consensus 189 v~~~~~~~~~~~~~~~~g~~~~v~~~~---~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~ 264 (340)
T TIGR00692 189 VIVSDPNEYRLELAKKMGATYVVNPFK---EDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPP 264 (340)
T ss_pred EEEECCCHHHHHHHHHhCCcEEEcccc---cCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCC
Confidence 888888888999999999999998877 7788888888776 9999999999776688999999998 9999998753
Q ss_pred CCCcccccHH-HHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 246 PGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
. ...++.. .+..+++++.+.... ...+.+.+++++++++.+++.+.+.+.+++++++++++.+.+++..|+++++
T Consensus 265 ~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~gkvvv~~ 340 (340)
T TIGR00692 265 G--KVTIDFTNKVIFKGLTIYGITGR--HMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQTGKVILSL 340 (340)
T ss_pred C--CcccchhhhhhhcceEEEEEecC--CchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 2 2222233 455567777765421 1234678899999999887655577999999999999999887656998864
No 70
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.8e-33 Score=256.47 Aligned_cols=284 Identities=27% Similarity=0.429 Sum_probs=232.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|++++.+++||+|++.+..+|+.|.+|..+.+++|...++ .|....|
T Consensus 56 ~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 119 (341)
T cd05281 56 KPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKI---LGVDTDG------------- 119 (341)
T ss_pred CCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccce---EeccCCC-------------
Confidence 467889999999999999999999999999998889999999999999999976543 4443444
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|++++.+.++++|++++++.+ ++...+.++++++. ...+++++|||+|+|++|++++|+|+..|..+
T Consensus 120 ------~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~ 190 (341)
T cd05281 120 ------CFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASL 190 (341)
T ss_pred ------cceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 9999999999999999999998555 55567888888654 45578999999988999999999999999856
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++++++++.+.++++|++++++.+. .++. .+++.+++ ++|++|||+++......++++|+++ |+++.+|...
T Consensus 191 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 265 (341)
T cd05281 191 VIASDPNPYRLELAKKMGADVVINPRE---EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPP 265 (341)
T ss_pred EEEECCCHHHHHHHHHhCcceeeCccc---ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence 888888889999999999999988766 6777 78888877 9999999999877688999999998 9999998643
Q ss_pred CCCcccccHH-HHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCceeEEEEEe
Q 020435 246 PGSQLSLSSF-EVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCLRCVIWM 324 (326)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~k~vv~~ 324 (326)
. ...+++. ....+++.+.+.... ...+.++.+++++.++.+++.+.+.+.++++++++|++.+.+++..|+++++
T Consensus 266 ~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~gk~vv~~ 341 (341)
T cd05281 266 G--PVDIDLNNLVIFKGLTVQGITGR--KMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGKCGKVVLYP 341 (341)
T ss_pred C--CcccccchhhhccceEEEEEecC--CcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCCCceEEecC
Confidence 2 2222222 245567777766422 1235688899999999887666677889999999999999988833998864
No 71
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=4.8e-33 Score=255.04 Aligned_cols=287 Identities=26% Similarity=0.465 Sum_probs=236.3
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|+|++|+|+.+|++++.|++||+|+..+...|+.|.+|..+....|..... +|....|
T Consensus 51 ~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 114 (343)
T cd08236 51 HPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGSRRDG------------- 114 (343)
T ss_pred CCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcce---EecccCC-------------
Confidence 467899999999999999999999999999999888999999999998888876543 4443444
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|++++++.++++|+++++++++++ ..++|||+++. ..+++++++|||+|+|.+|++++|+|+++|+.+
T Consensus 115 ------~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~ 186 (343)
T cd08236 115 ------AFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKR 186 (343)
T ss_pred ------cccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCE
Confidence 9999999999999999999999999888 57899999874 778999999999988999999999999999944
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++++++++.+.++++|++++++..+ .. .+.+++..++ ++|++|||.+.......++++|+++ |+++.+|...
T Consensus 187 v~~~~~~~~~~~~l~~~g~~~~~~~~~---~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~ 261 (343)
T cd08236 187 VIAVDIDDEKLAVARELGADDTINPKE---ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPY 261 (343)
T ss_pred EEEEcCCHHHHHHHHHcCCCEEecCcc---cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccC
Confidence 999999999999998899999998876 55 6777777777 8999999998876688999999998 9999998654
Q ss_pred CCCc-ccccHHHHHhcCCEEEeeeccCCC--CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHc-Ccee-EE
Q 020435 246 PGSQ-LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK-GKCL-RC 320 (326)
Q Consensus 246 ~~~~-~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~-~~~~-k~ 320 (326)
.... .......++.++.++.++...... ..+.+++++++++++.+.+.+.+...+++++++++++.+.+ +... |+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 341 (343)
T cd08236 262 GDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKV 341 (343)
T ss_pred CCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEE
Confidence 2211 122334455678888887643211 14568889999999987644446688999999999999998 5444 77
Q ss_pred EE
Q 020435 321 VI 322 (326)
Q Consensus 321 vv 322 (326)
|+
T Consensus 342 v~ 343 (343)
T cd08236 342 LL 343 (343)
T ss_pred eC
Confidence 64
No 72
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=5.1e-33 Score=254.63 Aligned_cols=274 Identities=22% Similarity=0.312 Sum_probs=220.2
Q ss_pred CCCcccCCceeEEEEEecCCCCC-ccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDG-VVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~-~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
.+|.++|+|++|+|+++|++++. +++||+|++.+..+|+.|+.|..+.. ....
T Consensus 62 ~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-------------~~~~------------- 115 (341)
T cd08262 62 GADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLS-------------PEAP------------- 115 (341)
T ss_pred CCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCC-------------cCCC-------------
Confidence 46889999999999999999987 99999999999999999999932110 0112
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
|+|+||++++.+.++++|+++++++++ +.+++++||++ ...++++++++|||+|+|++|++++|+|+.+|+.
T Consensus 116 ------g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~ 187 (341)
T cd08262 116 ------GGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG 187 (341)
T ss_pred ------CceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 399999999999999999999999887 56688999997 5788999999999998899999999999999995
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHH---HHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQ---IIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~---~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.++++++++++.+.++++|+++++++++ .+..+ .+.+.+++ ++|++|||.++......++++++++ |+++.+
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~ 263 (341)
T cd08262 188 PIVASDFSPERRALALAMGADIVVDPAA---DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVV 263 (341)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEEcCCC---cCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEE
Confidence 5788888899999999999999998765 32211 34455555 8999999999864588899999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
|...... .........+++++.++... ..+++++++++++++.+++.+.+++.+++++++++++.+.+++.. |+
T Consensus 264 g~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kv 338 (341)
T cd08262 264 GVCMESD--NIEPALAIRKELTLQFSLGY---TPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKI 338 (341)
T ss_pred CCCCCCC--ccCHHHHhhcceEEEEEecc---cHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEE
Confidence 8653221 22222224467777655321 234788999999999888766667999999999999999988765 88
Q ss_pred EEE
Q 020435 321 VIW 323 (326)
Q Consensus 321 vv~ 323 (326)
+++
T Consensus 339 vv~ 341 (341)
T cd08262 339 LVD 341 (341)
T ss_pred EeC
Confidence 863
No 73
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.4e-33 Score=255.08 Aligned_cols=268 Identities=26% Similarity=0.354 Sum_probs=223.3
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++++++||+|++.+...|+.|.+|+.+++++|....+ .++...|
T Consensus 53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~~~g------------- 116 (325)
T cd08264 53 PMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVVSNG------------- 116 (325)
T ss_pred CCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccce---eeccCCC-------------
Confidence 357899999999999999999999999999998888999999999999999987654 4444445
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
+|++|++++++.++++|+++++++++.+++.+.|||+++.. ++++++++|+|+|+ |++|++++++|++.|+
T Consensus 117 ------~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~- 188 (325)
T cd08264 117 ------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA- 188 (325)
T ss_pred ------ceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-
Confidence 99999999999999999999999999999999999998654 88999999999997 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+|+++++ .+.++++|++++++.++ ..+.+++++ +++|+++||.++.. +...+++++++ |+++.+|...
T Consensus 189 ~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~-~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~ 256 (325)
T cd08264 189 EVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEIT-KMADVVINSLGSSF-WDLSLSVLGRG-GRLVTFGTLT 256 (325)
T ss_pred eEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHh-CCCCEEEECCCHHH-HHHHHHhhccC-CEEEEEecCC
Confidence 8888863 36677899988887644 245566666 68999999999864 89999999998 9999998642
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
.....++...+..++.++.++..+. +++++++++++...+ . .+.+.|+++++++|++.+.+++..
T Consensus 257 -~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~a~~~~~~~~~~ 321 (325)
T cd08264 257 -GGEVKLDLSDLYSKQISIIGSTGGT---RKELLELVKIAKDLK--V--KVWKTFKLEEAKEALKELFSKERD 321 (325)
T ss_pred -CCCCccCHHHHhhcCcEEEEccCCC---HHHHHHHHHHHHcCC--c--eeEEEEcHHHHHHHHHHHHcCCCc
Confidence 2235566666666788888875443 467888999986443 2 356889999999999999876654
No 74
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=1e-32 Score=251.85 Aligned_cols=281 Identities=28% Similarity=0.481 Sum_probs=234.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|+|++|+|+.+|++++++++||+|++.+...|+.|.+|..+++++|..... +|....|
T Consensus 51 ~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------------- 114 (334)
T cd08234 51 APPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVTRNG------------- 114 (334)
T ss_pred CCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcce---eccCCCC-------------
Confidence 378899999999999999999999999999999999999999999999998877653 4444455
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|++++.+.++++|+++++.+++.+ ..+.++++++ +.++++++++|||+|+|.+|++++++|++.|+..
T Consensus 115 ------~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~ 186 (334)
T cd08234 115 ------GFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASR 186 (334)
T ss_pred ------cceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcE
Confidence 9999999999999999999999998876 6888999876 7889999999999988999999999999999834
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++++++++.+.++++|++++++..+ .++... +.+.+ ++|++|||.+........+++++++ |+++.+|...
T Consensus 187 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~--~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~ 260 (334)
T cd08234 187 VTVAEPNEEKLELAKKLGATETVDPSR---EDPEAQ--KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYA 260 (334)
T ss_pred EEEECCCHHHHHHHHHhCCeEEecCCC---CCHHHH--HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCC
Confidence 899999999999999999888888776 455444 34444 9999999998766688999999998 9999998754
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEE
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv 322 (326)
......+....+..+++++.++... .+.+++++++++++.+++.+.++.++++++++++++.+.+ +.. |+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 261 PDARVSISPFEIFQKELTIIGSFIN----PYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred CCCCcccCHHHHHhCCcEEEEeccC----HHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 3333455555555567888777532 3568899999999988765556788999999999999998 444 8775
No 75
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=4.5e-33 Score=253.01 Aligned_cols=258 Identities=20% Similarity=0.239 Sum_probs=218.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
+..|.++|||++|+|+++|++++++++||+|++.+ ..
T Consensus 56 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~------------------------------~~------------- 92 (324)
T cd08292 56 PELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAP------------------------------VH------------- 92 (324)
T ss_pred CCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecc------------------------------CC-------------
Confidence 45689999999999999999999999999996532 12
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|+|++|+.+++..++++|+++++++++++++.+.|||+++ +.++++++++|||+|+ |.+|++++|+|+++|+
T Consensus 93 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~ 165 (324)
T cd08292 93 ------GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI 165 (324)
T ss_pred ------CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 3899999999999999999999999999988889999875 5688999999999987 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+++++..++++.+.++++|++++++..+ .++.+.+++.+++ ++|++|||.|+.. ...++++++++ |+++.+|.
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~d~~g~~~-~~~~~~~l~~~-g~~v~~g~ 239 (324)
T cd08292 166 -NVINLVRRDAGVAELRALGIGPVVSTEQ---PGWQDKVREAAGGAPISVALDSVGGKL-AGELLSLLGEG-GTLVSFGS 239 (324)
T ss_pred -eEEEEecCHHHHHHHHhcCCCEEEcCCC---chHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHhhcCC-cEEEEEec
Confidence 8999998999989888899999998877 7888889999988 9999999999976 78999999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCC-------CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK-------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
.. .....+++...+.++.++.++...... ..+.++.+++++++|.+++. +.+.|+++++.+|++.+.++.
T Consensus 240 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~ 316 (324)
T cd08292 240 MS-GEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPG 316 (324)
T ss_pred CC-CCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCC
Confidence 42 233455655566788998887644221 12357889999999987754 458899999999999998766
Q ss_pred ee-EEEE
Q 020435 317 CL-RCVI 322 (326)
Q Consensus 317 ~~-k~vv 322 (326)
.. |+++
T Consensus 317 ~~~kvvv 323 (324)
T cd08292 317 RAGKVLL 323 (324)
T ss_pred CCceEEe
Confidence 55 8776
No 76
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=5.2e-33 Score=255.36 Aligned_cols=273 Identities=23% Similarity=0.308 Sum_probs=222.6
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|+++++|++||+|++.+...|+.|..|.. ... .|...+|
T Consensus 75 ~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~--------~~~---~~~~~~g------------ 131 (350)
T cd08274 75 LSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD--------IDY---IGSERDG------------ 131 (350)
T ss_pred CCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc--------ccc---cCCCCCc------------
Confidence 45789999999999999999999999999999988888888766421 111 2222334
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
++++|+.++...++++|+++++++++++++.+.|||+++ ...+++++++|||+|+ |++|++++++|+++|+
T Consensus 132 -------~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~ 203 (350)
T cd08274 132 -------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA 203 (350)
T ss_pred -------cceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999976 7788999999999997 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|++++.+. +.+.++++|++.+++... ....+ ...+.+ ++|++|||.++.. +..++++++++ |+++.+|.
T Consensus 204 -~vi~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~--~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~g~ 274 (350)
T cd08274 204 -IVIAVAGAA-KEEAVRALGADTVILRDA---PLLAD--AKALGGEPVDVVADVVGGPL-FPDLLRLLRPG-GRYVTAGA 274 (350)
T ss_pred -EEEEEeCch-hhHHHHhcCCeEEEeCCC---ccHHH--HHhhCCCCCcEEEecCCHHH-HHHHHHHhccC-CEEEEecc
Confidence 788888665 788888899876666544 33333 455566 9999999999875 89999999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEE
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv 322 (326)
.. .....++...++.+++++.++.... .+.+.++++++.+++++. .+++.|++++++++++.+..+... |+++
T Consensus 275 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kvvi 348 (350)
T cd08274 275 IA-GPVVELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIRP--VVAKTFPLSEIREAQAEFLEKRHVGKLVL 348 (350)
T ss_pred cC-CccccCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCccc--ccccccCHHHHHHHHHHHhcCCCceEEEE
Confidence 42 2224566666677788988876432 357889999999997653 366889999999999999887665 8887
Q ss_pred Ee
Q 020435 323 WM 324 (326)
Q Consensus 323 ~~ 324 (326)
++
T Consensus 349 ~~ 350 (350)
T cd08274 349 VP 350 (350)
T ss_pred eC
Confidence 64
No 77
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.3e-32 Score=250.54 Aligned_cols=282 Identities=31% Similarity=0.459 Sum_probs=231.9
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 82 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 82 (326)
+|....|.++|||++|+|+.+|++++++++||+|++.+...|+.|.+|+.+.+++|..... .|....|
T Consensus 49 ~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g--------- 116 (332)
T cd08259 49 FPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAE---YGEEVDG--------- 116 (332)
T ss_pred CCCCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccc---cccccCC---------
Confidence 4445668899999999999999999999999999999888999999999999999976532 4544445
Q ss_pred cccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHH
Q 020435 83 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARL 161 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~ 161 (326)
+|++|++++.+.++++|+++++++++.+++.+.|||+++.. .++.+++++||+|+ |.+|++++++++.
T Consensus 117 ----------~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~ 185 (332)
T cd08259 117 ----------GFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKA 185 (332)
T ss_pred ----------eeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998766 88999999999987 9999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.|. +|+++++++++.+.+++++.+++++.+ ++.+.+.+.. ++|++++|++... ...++++++++ |+++.+
T Consensus 186 ~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~ 255 (332)
T cd08259 186 LGA-RVIAVTRSPEKLKILKELGADYVIDGS-----KFSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG-GRLVLI 255 (332)
T ss_pred cCC-eEEEEeCCHHHHHHHHHcCCcEEEecH-----HHHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC-CEEEEE
Confidence 999 899999998888888888987777543 2555555543 7999999999887 88999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
+..... ...+.......++..+.++.. ...+++++++++++++.+++ .+++.++++++++|++.+.+++.. |+
T Consensus 256 g~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~kv 329 (332)
T cd08259 256 GNVTPD-PAPLRPGLLILKEIRIIGSIS---ATKADVEEALKLVKEGKIKP--VIDRVVSLEDINEALEDLKSGKVVGRI 329 (332)
T ss_pred cCCCCC-CcCCCHHHHHhCCcEEEEecC---CCHHHHHHHHHHHHcCCCcc--ceeEEEcHHHHHHHHHHHHcCCcccEE
Confidence 864322 122233333346777766632 22457888999999997653 367899999999999999988765 88
Q ss_pred EEE
Q 020435 321 VIW 323 (326)
Q Consensus 321 vv~ 323 (326)
+++
T Consensus 330 v~~ 332 (332)
T cd08259 330 VLK 332 (332)
T ss_pred EeC
Confidence 763
No 78
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=8.5e-33 Score=253.60 Aligned_cols=261 Identities=20% Similarity=0.231 Sum_probs=203.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++|++|++||+|+.. + +
T Consensus 66 ~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------~----~------------ 101 (345)
T cd08293 66 APWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF----------------------------N----W------------ 101 (345)
T ss_pred CCccCCCceEeeEEEEEeccCCCCCCCCCEEEec----------------------------C----C------------
Confidence 3578899999999999999999999999999641 0 2
Q ss_pred ccccccccccceEEecccceEEcCCCCCccc----cccccchhhhhhhhhhhhcccCCC--CEEEEEcc-CHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNR----ACLLSCGVSTGVGAAWRTANVEVG--STVVIFGL-GSIGLAVAEG 158 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~----aa~l~~~~~ta~~~l~~~~~~~~~--~~vlI~Ga-g~~G~~a~~l 158 (326)
+|+||++++++.++++|+++++++ +++++.++.|||+++.+.++++++ ++|||+|+ |++|++++|+
T Consensus 102 -------~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiql 174 (345)
T cd08293 102 -------PWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQI 174 (345)
T ss_pred -------CceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHH
Confidence 799999999999999999865443 456677899999988788888877 99999987 9999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 159 ARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
|+++|+.+|+++++++++.+.+++ +|+++++++.+ .++.+.+++++++++|++|||+|+.. +..++++++++ |+
T Consensus 175 Ak~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~---~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~-G~ 249 (345)
T cd08293 175 GRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT---DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN-SH 249 (345)
T ss_pred HHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC---CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC-CE
Confidence 999998569999999999998876 99999999887 78888888887669999999999987 79999999998 99
Q ss_pred EEEeccCCCC-C--c--cccc--HHHHH-hcCCEEEeeeccCCC--CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHH
Q 020435 238 TIVLGVDQPG-S--Q--LSLS--SFEVL-HSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 307 (326)
Q Consensus 238 ~v~~g~~~~~-~--~--~~~~--~~~~~-~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~ 307 (326)
++.+|..... . . ..+. ...+. .++++.......... ..+.++++++++++|.+++. ....++++++++
T Consensus 250 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~ 327 (345)
T cd08293 250 IILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGE 327 (345)
T ss_pred EEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHH
Confidence 9999853211 0 0 1111 11111 233333333211111 01236678899999987654 335579999999
Q ss_pred HHHHHHcCcee-EEEEEe
Q 020435 308 AFDLLIKGKCL-RCVIWM 324 (326)
Q Consensus 308 a~~~~~~~~~~-k~vv~~ 324 (326)
|++.+.+++.. |+++.+
T Consensus 328 A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 328 AFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred HHHHHhcCCCCCeEEEEC
Confidence 99999988765 999864
No 79
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=5.1e-33 Score=234.91 Aligned_cols=268 Identities=22% Similarity=0.279 Sum_probs=219.4
Q ss_pred CCCC-CCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccc
Q 020435 1 MKDF-PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKD 79 (326)
Q Consensus 1 g~~~-~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 79 (326)
|.|| .+.+|.|-|+|++|+|+.+|+++++|++||+|+....
T Consensus 69 GvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a-------------------------------------- 110 (354)
T KOG0025|consen 69 GVYPVRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSA-------------------------------------- 110 (354)
T ss_pred cccCCCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCC--------------------------------------
Confidence 6788 6789999999999999999999999999999975422
Q ss_pred cCCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHH
Q 020435 80 LRGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEG 158 (326)
Q Consensus 80 ~~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~l 158 (326)
+.|+|++|.+.+++.++++++.++.+.||++...-+|||..+.+.-++.+||+|.-.|| +++|++.+|+
T Consensus 111 ----------~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQl 180 (354)
T KOG0025|consen 111 ----------NLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQL 180 (354)
T ss_pred ----------CCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHH
Confidence 13599999999999999999999999999999999999999888999999999999998 8999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHH----HhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhc
Q 020435 159 ARLCGATRIIGVDVISEKFEIG----KRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRK 233 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~~----~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~ 233 (326)
||++|. +.+.++|+....+.+ +.+|+++||..+++.+..... ..... ++.+.|||+|+.. .....+.|..
T Consensus 181 aka~Gi-ktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k---~~~~~~~prLalNcVGGks-a~~iar~L~~ 255 (354)
T KOG0025|consen 181 AKALGI-KTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKK---FKGDNPRPRLALNCVGGKS-ATEIARYLER 255 (354)
T ss_pred HHHhCc-ceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhh---hhccCCCceEEEeccCchh-HHHHHHHHhc
Confidence 999999 889999888776655 569999999876633322221 11223 8999999999988 7788899999
Q ss_pred CCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCC--------CHHHHHHHHhCCCCCCCcceeeeeccccH
Q 020435 234 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKS--------DIPILLKRYMDKELELDKFVTHEMKFEEI 305 (326)
Q Consensus 234 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--------~~~~~~~l~~~g~~~~~~~i~~~~~l~~i 305 (326)
+ |+++.||. ++..+..++...+++|++.+.|+|+..+...+ -+.++.++++.|++... -.+..++++-
T Consensus 256 G-gtmvTYGG-MSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~--~~e~v~L~~~ 331 (354)
T KOG0025|consen 256 G-GTMVTYGG-MSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAP--NCEKVPLADH 331 (354)
T ss_pred C-ceEEEecC-ccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccc--cceeeechhh
Confidence 8 99999997 56778888888899999999999987654221 25678899999987655 3356788887
Q ss_pred HHHHHHHHcCc--eeEEEEEeC
Q 020435 306 NSAFDLLIKGK--CLRCVIWMG 325 (326)
Q Consensus 306 ~~a~~~~~~~~--~~k~vv~~~ 325 (326)
..|++..-... ..|-++.++
T Consensus 332 ~tald~~L~~~~~~~Kq~i~~e 353 (354)
T KOG0025|consen 332 KTALDAALSKFGKSGKQIIVLE 353 (354)
T ss_pred hHHHHHHHHHhccCCceEEEec
Confidence 77777554332 236666553
No 80
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=5.4e-33 Score=252.91 Aligned_cols=258 Identities=21% Similarity=0.247 Sum_probs=207.9
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
+....|.|+|.|++|+|++.|+ +|++||||+..
T Consensus 53 ~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------------------------------------------- 85 (325)
T TIGR02825 53 RLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------------------------------------------- 85 (325)
T ss_pred cCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe--------------------------------------------
Confidence 3334578999999999999874 69999999642
Q ss_pred ccccccccccccceEEecccceEEc----CCCCCcccc-ccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHH
Q 020435 84 TIHHFVSVSSFSEYTVLDIAHVVKV----DPTVPPNRA-CLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAE 157 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~~~~~i----p~~~s~~~a-a~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~ 157 (326)
++|++|+.++.+++.++ |++++++++ +++++++.|||+++.+.+++++|++|||+|+ |++|++++|
T Consensus 86 --------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiq 157 (325)
T TIGR02825 86 --------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQ 157 (325)
T ss_pred --------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHH
Confidence 16899999999988887 999999987 6788899999998888899999999999986 999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 158 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
+||..|+ +|+++++++++.+.++++|+++++++++ ...+.+.++..+++++|++|||+|+.. +..++++++++ |+
T Consensus 158 lAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~--~~~~~~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~-G~ 232 (325)
T TIGR02825 158 IAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKT--VKSLEETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF-GR 232 (325)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccc--cccHHHHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC-cE
Confidence 9999999 8999999999999999999999999875 124555666665559999999999877 79999999998 99
Q ss_pred EEEeccCCCC---Cccc--ccHHHHHhcCCEEEeeeccCCC---CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHH
Q 020435 238 TIVLGVDQPG---SQLS--LSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAF 309 (326)
Q Consensus 238 ~v~~g~~~~~---~~~~--~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~ 309 (326)
++.+|..... .... .....++.+++++.++...... ..+.++++++++++|++++. +...|+++++++|+
T Consensus 233 iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~ 310 (325)
T TIGR02825 233 IAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAF 310 (325)
T ss_pred EEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHH
Confidence 9999864321 0111 1233455668888877543211 12357889999999988765 44678999999999
Q ss_pred HHHHcCcee-EEEEE
Q 020435 310 DLLIKGKCL-RCVIW 323 (326)
Q Consensus 310 ~~~~~~~~~-k~vv~ 323 (326)
+.+.+++.. |+|+.
T Consensus 311 ~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 311 MGMLKGENLGKTIVK 325 (325)
T ss_pred HHHhcCCCCCeEEeC
Confidence 999988765 88863
No 81
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3e-32 Score=248.38 Aligned_cols=280 Identities=26% Similarity=0.417 Sum_probs=230.1
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 82 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 82 (326)
+...+|.++|||++|+|+++|++++++++||+|++.+. ..|+.|.+|+.+++++|..... +++...|
T Consensus 49 ~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g--------- 116 (330)
T cd08245 49 GGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN---TGYTTQG--------- 116 (330)
T ss_pred CCCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccc---cCcccCC---------
Confidence 44457889999999999999999999999999987555 6799999999999999988654 4443445
Q ss_pred cccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHc
Q 020435 83 ETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLC 162 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~ 162 (326)
+|++|+.++...++++|+++++++++.+.+.+.|||+++.. .++.++++|||+|+|.+|++++++|+..
T Consensus 117 ----------~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~ 185 (330)
T cd08245 117 ----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAM 185 (330)
T ss_pred ----------ccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999999997654 7899999999998888999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|. +|+++++++++.+.++++|++.+++... ...... ..+++|+++||.+.......++++++++ |+++.++
T Consensus 186 G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~ 256 (330)
T cd08245 186 GF-ETVAITRSPDKRELARKLGADEVVDSGA---ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVG 256 (330)
T ss_pred CC-EEEEEeCCHHHHHHHHHhCCcEEeccCC---cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEEC
Confidence 99 8999999999999998899988887655 333222 2238999999988766688999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEE
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV 321 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~v 321 (326)
.... ....+....++.++.++.+++.+. ...++.++++++++.+.+ ..+.+++++++++++.+.+++.. |++
T Consensus 257 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~~~~~v 329 (330)
T cd08245 257 LPES-PPFSPDIFPLIMKRQSIAGSTHGG---RADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDVRFRFV 329 (330)
T ss_pred CCCC-CccccchHHHHhCCCEEEEeccCC---HHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCCCccee
Confidence 6432 223333445666788888876442 356888899999997764 33789999999999999887765 765
Q ss_pred E
Q 020435 322 I 322 (326)
Q Consensus 322 v 322 (326)
+
T Consensus 330 ~ 330 (330)
T cd08245 330 L 330 (330)
T ss_pred C
Confidence 4
No 82
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.3e-32 Score=249.01 Aligned_cols=276 Identities=25% Similarity=0.335 Sum_probs=227.7
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDL 80 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 80 (326)
.+|...+|.++|||++|+|+.+|++++++++||+|++.+. .+|+.|.+|..+.+++|....+ .++..+|
T Consensus 52 ~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g------- 121 (329)
T cd08298 52 DLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYTVDG------- 121 (329)
T ss_pred CCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccccCC-------
Confidence 3444567889999999999999999999999999987554 6799999999999999987775 5555556
Q ss_pred CCcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHH
Q 020435 81 RGETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGAR 160 (326)
Q Consensus 81 ~~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~ 160 (326)
+|++|+.++.+.++++|+++++.+++.+.+++.|||+++ +.++++++++|||+|+|++|++++++++
T Consensus 122 ------------~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~ 188 (329)
T cd08298 122 ------------GYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIAR 188 (329)
T ss_pred ------------ceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987 8899999999999998999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
+.|. +|+++++++++.+.++++|++++++... . .++++|+++++.+.......++++++++ |+++.
T Consensus 189 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~---------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~ 254 (329)
T cd08298 189 YQGA-EVFAFTRSGEHQELARELGADWAGDSDD---L---------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVL 254 (329)
T ss_pred HCCC-eEEEEcCChHHHHHHHHhCCcEEeccCc---c---------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEE
Confidence 9998 9999999999999999999988887654 1 1238999999877666689999999998 99999
Q ss_pred eccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 241 LGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 241 ~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
+|... .....++... +.++..+.++... ..++++.++++++++.+++ . .+.|+++++++|++.+.+++.. |
T Consensus 255 ~g~~~-~~~~~~~~~~-~~~~~~i~~~~~~---~~~~~~~~~~l~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~~~~ 326 (329)
T cd08298 255 AGIHM-SDIPAFDYEL-LWGEKTIRSVANL---TRQDGEEFLKLAAEIPIKP--E-VETYPLEEANEALQDLKEGRIRGA 326 (329)
T ss_pred EcCCC-CCCCccchhh-hhCceEEEEecCC---CHHHHHHHHHHHHcCCCCc--e-EEEEeHHHHHHHHHHHHcCCCcce
Confidence 88532 1222233332 3456667666422 1346888999999997754 2 4889999999999999987765 7
Q ss_pred EEE
Q 020435 320 CVI 322 (326)
Q Consensus 320 ~vv 322 (326)
+++
T Consensus 327 ~v~ 329 (329)
T cd08298 327 AVL 329 (329)
T ss_pred eeC
Confidence 663
No 83
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=2.3e-32 Score=250.07 Aligned_cols=259 Identities=19% Similarity=0.232 Sum_probs=209.9
Q ss_pred CCCcccCCce--eEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 7 VFPRILGHEA--IGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 7 ~~p~i~G~e~--~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
.+|+++|+++ .|.+..+|+++++|++||+|+..
T Consensus 66 ~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~--------------------------------------------- 100 (338)
T cd08295 66 LPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGF--------------------------------------------- 100 (338)
T ss_pred CCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEec---------------------------------------------
Confidence 5688999865 45555688889999999999531
Q ss_pred cccccccccccceEEecc-cceEEcC-CCCCcc-ccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHH
Q 020435 85 IHHFVSVSSFSEYTVLDI-AHVVKVD-PTVPPN-RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGAR 160 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~-~~~~~ip-~~~s~~-~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~ 160 (326)
|+|+||+++++ ..++++| ++++++ +++++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+
T Consensus 101 -------g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk 173 (338)
T cd08295 101 -------TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAK 173 (338)
T ss_pred -------CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence 28999999999 7999995 678887 789999999999998878899999999999997 999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
++|+ +|+++++++++.+++++ +|+++++++.+ ..++.+.+++.+++++|++||++|+.. +..++++++++ |+++
T Consensus 174 ~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~~i~~~~~~gvd~v~d~~g~~~-~~~~~~~l~~~-G~iv 248 (338)
T cd08295 174 LKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE--EPDLDAALKRYFPNGIDIYFDNVGGKM-LDAVLLNMNLH-GRIA 248 (338)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC--cccHHHHHHHhCCCCcEEEEECCCHHH-HHHHHHHhccC-cEEE
Confidence 9999 89999999999999998 99999998654 146777888877569999999999865 89999999998 9999
Q ss_pred EeccCCCCCc----ccccHHHHHhcCCEEEeeeccCCCC--CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHH
Q 020435 240 VLGVDQPGSQ----LSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 313 (326)
Q Consensus 240 ~~g~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~ 313 (326)
.+|....... ...+...++.+++++.++....... .+.++++++++++|++++. +...|+++++++|++.+.
T Consensus 249 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~ 326 (338)
T cd08295 249 ACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLF 326 (338)
T ss_pred EecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHh
Confidence 9986432111 1123445566788888865443211 2346788999999987654 446799999999999999
Q ss_pred cCcee-EEEEEe
Q 020435 314 KGKCL-RCVIWM 324 (326)
Q Consensus 314 ~~~~~-k~vv~~ 324 (326)
+++.. |+++++
T Consensus 327 ~~~~~GkvVl~~ 338 (338)
T cd08295 327 TGSNIGKQVVKV 338 (338)
T ss_pred cCCCCceEEEEC
Confidence 88765 999864
No 84
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=7.4e-32 Score=243.41 Aligned_cols=250 Identities=26% Similarity=0.434 Sum_probs=213.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCC-CCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFL-ADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
..+|.++|+|++|+|+++|++++.+++||+|++.+. .+|+.|.+|..+..+.|...+. +|....|
T Consensus 53 ~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g----------- 118 (306)
T cd08258 53 VETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQADG----------- 118 (306)
T ss_pred CCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCce---eeecCCC-----------
Confidence 356889999999999999999999999999988764 7899999999999999976542 3433344
Q ss_pred cccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC
Q 020435 85 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA 164 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~ 164 (326)
+|++|++++...++++|+++++++++ +...+++||+++...++++++++|||.|+|.+|++++++|+..|+
T Consensus 119 --------~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~ 189 (306)
T cd08258 119 --------GFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA 189 (306)
T ss_pred --------ceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999887 666889999998888999999999998889999999999999999
Q ss_pred CEEEEEc--CChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 165 TRIIGVD--VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 165 ~~V~~~~--~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+.+. +++++.+.++++|++++ +... .++.+.+.+..++ ++|++|||.++...+...+++|+++ |+++.+
T Consensus 190 -~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~ 263 (306)
T cd08258 190 -TVVVVGTEKDEVRLDVAKELGADAV-NGGE---EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQV 263 (306)
T ss_pred -EEEEECCCCCHHHHHHHHHhCCccc-CCCc---CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEE
Confidence 787764 34557778888999888 7766 7888888888776 9999999998766688999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCC
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDK 288 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g 288 (326)
|... .....++...++.+++++.|+++++ ++|++++++++++|
T Consensus 264 g~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~~~~~ 306 (306)
T cd08258 264 GIFG-PLAASIDVERIIQKELSVIGSRSST---PASWETALRLLASG 306 (306)
T ss_pred cccC-CCCcccCHHHHhhcCcEEEEEecCc---hHhHHHHHHHHhcC
Confidence 9854 3346667777788999999998765 57899999999875
No 85
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=1.4e-31 Score=243.72 Aligned_cols=255 Identities=20% Similarity=0.227 Sum_probs=207.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
++|.++|+|++|+|++ .+++|++||||+..
T Consensus 58 ~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~----------------------------------------------- 87 (329)
T cd08294 58 EGDTMIGTQVAKVIES---KNSKFPVGTIVVAS----------------------------------------------- 87 (329)
T ss_pred CCCcEecceEEEEEec---CCCCCCCCCEEEee-----------------------------------------------
Confidence 4689999999999995 45689999999542
Q ss_pred cccccccccceEEeccc---ceEEcCCCCCc-----cccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHH
Q 020435 87 HFVSVSSFSEYTVLDIA---HVVKVDPTVPP-----NRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAE 157 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~---~~~~ip~~~s~-----~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~ 157 (326)
++|++|+.++.+ .++++|++++. ..+++++++++|||+++.+.+++++|++|||+|+ |++|++++|
T Consensus 88 -----~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiq 162 (329)
T cd08294 88 -----FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQ 162 (329)
T ss_pred -----CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHH
Confidence 168899999999 99999999982 2234678899999998888899999999999986 999999999
Q ss_pred HHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 158 GARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 158 la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
+|+..|+ +|+++++++++.+.++++|+++++++.+ .++.+.+++.+++++|++||++|+.. +..++++++++ |+
T Consensus 163 lA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~---~~~~~~v~~~~~~gvd~vld~~g~~~-~~~~~~~l~~~-G~ 236 (329)
T cd08294 163 IAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT---VSLEEALKEAAPDGIDCYFDNVGGEF-SSTVLSHMNDF-GR 236 (329)
T ss_pred HHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHCCCCcEEEEECCCHHH-HHHHHHhhccC-CE
Confidence 9999999 8999999999999999999999999887 78888888877669999999999966 89999999998 99
Q ss_pred EEEeccCCCCC---c--ccccHHHHHhcCCEEEeeeccCCC--CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHH
Q 020435 238 TIVLGVDQPGS---Q--LSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 310 (326)
Q Consensus 238 ~v~~g~~~~~~---~--~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~ 310 (326)
++.+|...... . .......++.+++++.++...... ..+.++++++++++|.+++. ....++++++++|++
T Consensus 237 iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~ 314 (329)
T cd08294 237 VAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYR--EHVTEGFENMPQAFI 314 (329)
T ss_pred EEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCC--cccccCHHHHHHHHH
Confidence 99998532111 1 122233456678888887543221 12236788899999987765 335689999999999
Q ss_pred HHHcCcee-EEEEEe
Q 020435 311 LLIKGKCL-RCVIWM 324 (326)
Q Consensus 311 ~~~~~~~~-k~vv~~ 324 (326)
.+.+++.. |+++++
T Consensus 315 ~~~~~~~~gkvvv~~ 329 (329)
T cd08294 315 GMLKGENTGKAIVKV 329 (329)
T ss_pred HHHcCCCCCeEEEeC
Confidence 99988765 998863
No 86
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.2e-30 Score=236.97 Aligned_cols=262 Identities=20% Similarity=0.237 Sum_probs=218.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++++++||+|++... ...
T Consensus 57 ~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------------------------~~~------------- 95 (324)
T cd08244 57 PELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTG----------------------------RAG------------- 95 (324)
T ss_pred CCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccC----------------------------CCC-------------
Confidence 456889999999999999999999999999976421 012
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|+|++|+.++.+.++++|+++++++++++++.+.|||. +.+.++++++++|+|+|+ |.+|++++++|+..|+
T Consensus 96 ------g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~ 168 (324)
T cd08244 96 ------GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA 168 (324)
T ss_pred ------ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Confidence 39999999999999999999999999999999999964 678889999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+++++++++.+.++++|++++++..+ .++.+.+.+.+++ ++|+++||+|+.. ...++++++++ |+++.+|.
T Consensus 169 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~ 242 (324)
T cd08244 169 -TVVGAAGGPAKTALVRALGADVAVDYTR---PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG-GRFLTYGW 242 (324)
T ss_pred -EEEEEeCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC-cEEEEEec
Confidence 8999999999999999999988888777 6788888888877 9999999999887 78999999998 99999987
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCC---CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
.... ...++...++.++.++.++....... .+.+++++++++++.+.. .++..|+++++++|++.+.+++.. |
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~~~k 319 (324)
T cd08244 243 ASGE-WTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARSTVGK 319 (324)
T ss_pred CCCC-CCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCCCCce
Confidence 5322 22455445567788888775433211 235777889999997653 366889999999999999887766 8
Q ss_pred EEEEe
Q 020435 320 CVIWM 324 (326)
Q Consensus 320 ~vv~~ 324 (326)
+++++
T Consensus 320 vv~~~ 324 (324)
T cd08244 320 VLLLP 324 (324)
T ss_pred EEEeC
Confidence 88764
No 87
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.98 E-value=4.4e-30 Score=234.22 Aligned_cols=278 Identities=23% Similarity=0.329 Sum_probs=228.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|++++++++||+|++..+..|..+.+ ..|..... +|...+|
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~------~~~~~~~~---~~~~~~g------------- 113 (336)
T cd08276 56 KDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPP------TAEDEASA---LGGPIDG------------- 113 (336)
T ss_pred CCCcccccceeEEEEEeCCCCcCCCCCCEEEEecccccccccc------cccccccc---cccccCc-------------
Confidence 4688999999999999999999999999999876665554443 34433221 3433344
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR 166 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~ 166 (326)
+|++|+.++.+.++++|+++++.+++.+.+.+.+||+++.+..+++++++|+|+|+|++|+++++++++.|+ +
T Consensus 114 ------~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~ 186 (336)
T cd08276 114 ------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-R 186 (336)
T ss_pred ------eeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-E
Confidence 999999999999999999999999999999999999988777889999999999889999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|++++.++++.+.++++|.+++++... ..++.+.+++.+++ ++|+++||.+... ...++++++++ |+++.+|...
T Consensus 187 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-G~~v~~g~~~ 262 (336)
T cd08276 187 VIATSSSDEKLERAKALGADHVINYRT--TPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPG-GVISLIGFLS 262 (336)
T ss_pred EEEEeCCHHHHHHHHHcCCCEEEcCCc--ccCHHHHHHHHcCCCCCcEEEECCChHH-HHHHHHhhcCC-CEEEEEccCC
Confidence 999999999999998899998887653 24577788888887 9999999998765 88999999998 9999998653
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEEE
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVIW 323 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv~ 323 (326)
.. ........++.+++++.+...+. .+.+++++++++++.+.+. .++.+++++++++++.+.+++.. |++++
T Consensus 263 ~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 263 GF-EAPVLLLPLLTKGATLRGIAVGS---RAQFEAMNRAIEAHRIRPV--IDRVFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred CC-ccCcCHHHHhhcceEEEEEecCc---HHHHHHHHHHHHcCCcccc--cCcEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 22 22344556677899998886543 3578889999988866543 55889999999999999887665 88875
No 88
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.98 E-value=1.6e-30 Score=236.97 Aligned_cols=263 Identities=22% Similarity=0.282 Sum_probs=216.1
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++.+++||+|+.. ..+|
T Consensus 56 ~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~------------------------------~~~g------------ 93 (334)
T PTZ00354 56 PGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMAL------------------------------LPGG------------ 93 (334)
T ss_pred CCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEe------------------------------cCCC------------
Confidence 3457799999999999999999999999999642 1123
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
++++|++++.+.++++|+++++++++.+.+++.|||+++.+..+++++++|||+|+ |++|++++++|++.|+
T Consensus 94 -------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~ 166 (334)
T PTZ00354 94 -------GYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA 166 (334)
T ss_pred -------ceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 89999999999999999999999999999999999998877788999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCcc-HHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS-VSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~-~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+++.+.+++++.+.++++|++++++... .+ +.+.+++.+++ ++|++|||.++.. +..++++++++ |+++.++
T Consensus 167 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~i~~~ 240 (334)
T PTZ00354 167 -ATIITTSSEEKVDFCKKLAAIILIRYPD---EEGFAPKVKKLTGEKGVNLVLDCVGGSY-LSETAEVLAVD-GKWIVYG 240 (334)
T ss_pred -EEEEEeCCHHHHHHHHHcCCcEEEecCC---hhHHHHHHHHHhCCCCceEEEECCchHH-HHHHHHHhccC-CeEEEEe
Confidence 7788888999999999999998998765 44 77788888877 9999999998765 88999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCC--C-----CCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcC
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA--K-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 315 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~ 315 (326)
...+.....++...++.+++++.++....... + +.++.++++++++.++. .+.+.+++++++++++.+.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~ 318 (334)
T PTZ00354 241 FMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQN 318 (334)
T ss_pred cCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhC
Confidence 64322211266566666677888876443211 0 12467788998987654 366889999999999999887
Q ss_pred cee-EEEEEeC
Q 020435 316 KCL-RCVIWMG 325 (326)
Q Consensus 316 ~~~-k~vv~~~ 325 (326)
+.. |+++++.
T Consensus 319 ~~~~kvvv~~~ 329 (334)
T PTZ00354 319 KNIGKVVLTVN 329 (334)
T ss_pred CCCceEEEecC
Confidence 655 9998765
No 89
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.98 E-value=1.4e-30 Score=230.04 Aligned_cols=243 Identities=31% Similarity=0.468 Sum_probs=202.9
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+++|++++.|++||+|+..+..+|+.|.+|+. .|..... .+....|
T Consensus 27 ~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~g------------ 87 (271)
T cd05188 27 PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCPGGGI---LGEGLDG------------ 87 (271)
T ss_pred CCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCCCCCE---eccccCC------------
Confidence 45688999999999999999999999999999999999999999996 6655543 3444445
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT 165 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~ 165 (326)
++++|+.++.+.++++|+++++++++.+++++.|||+++.....+.++++|||+|+|++|++++++++..|.
T Consensus 88 -------~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~- 159 (271)
T cd05188 88 -------GFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA- 159 (271)
T ss_pred -------cceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-
Confidence 999999999999999999999999999999999999987777777899999999985599999999999998
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++++++..+ .++.+.+. ...+ ++|++|++++.......++++++++ |+++.++..
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~~~~ 234 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKE---EDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPG-GRIVVVGGT 234 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCc---CCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEEccC
Confidence 9999999999999999999988888776 66666666 5555 9999999999945588999999998 999999875
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHH
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKR 284 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l 284 (326)
...... ......+.+++++.++.... .+++++++++
T Consensus 235 ~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 270 (271)
T cd05188 235 SGGPPL-DDLRRLLFKELTIIGSTGGT---REDFEEALDL 270 (271)
T ss_pred CCCCCc-ccHHHHHhcceEEEEeecCC---HHHHHHHHhh
Confidence 433222 22345567899999886543 3467777765
No 90
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.98 E-value=2.2e-30 Score=236.63 Aligned_cols=261 Identities=17% Similarity=0.165 Sum_probs=205.3
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
+...+|.++|+|++|+|+++|+++++|++||+|+... +....|
T Consensus 54 ~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------~~~~~g---------- 96 (336)
T TIGR02817 54 PEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG---------------------------DIDRPG---------- 96 (336)
T ss_pred CCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC---------------------------CCCCCC----------
Confidence 3445788999999999999999999999999996521 011123
Q ss_pred ccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCC-----CCEEEEEcc-CHHHHHHHH
Q 020435 84 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAE 157 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~vlI~Ga-g~~G~~a~~ 157 (326)
+|++|++++++.++++|+++++++++.+++.+.|||+++....++++ +++|||+|+ |++|++++|
T Consensus 97 ---------~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~ 167 (336)
T TIGR02817 97 ---------SNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQ 167 (336)
T ss_pred ---------cccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHH
Confidence 99999999999999999999999999999999999998878888877 999999986 999999999
Q ss_pred HHHHc-CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCc
Q 020435 158 GARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWG 236 (326)
Q Consensus 158 la~~~-g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G 236 (326)
+|+.+ |+ +|+++++++++.+.++++|+++++++.. ++.+.+++..++++|+++|+.++.......+++++++ |
T Consensus 168 ~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G 241 (336)
T TIGR02817 168 LARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-G 241 (336)
T ss_pred HHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-C
Confidence 99998 99 9999999999999999999999998643 5677777754449999999987666588999999998 9
Q ss_pred EEEEeccCCCCCcccccHHHHHhcCCEEEeeecc--CCCC-------CCCHHHHHHHHhCCCCCCCcceeeee---cccc
Q 020435 237 KTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFG--GLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEE 304 (326)
Q Consensus 237 ~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~-------~~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~ 304 (326)
+++.++.. ..++...+..++.++.+.... .... .+.++++++++.++.+++. +.+.+ ++++
T Consensus 242 ~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~--~~~~~~~~~~~~ 314 (336)
T TIGR02817 242 RFALIDDP-----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTT--LAETFGTINAAN 314 (336)
T ss_pred EEEEEccc-----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeecc--chhccCCCCHHH
Confidence 99988532 233333344444665543222 1100 1246788999999976543 33444 4689
Q ss_pred HHHHHHHHHcCcee-EEEEE
Q 020435 305 INSAFDLLIKGKCL-RCVIW 323 (326)
Q Consensus 305 i~~a~~~~~~~~~~-k~vv~ 323 (326)
+++|++.+.+++.. |+++.
T Consensus 315 ~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 315 LKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHcCCccceEEEe
Confidence 99999999988765 87764
No 91
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.98 E-value=2.4e-30 Score=234.88 Aligned_cols=260 Identities=20% Similarity=0.260 Sum_probs=218.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
+.+|.++|||++|+|+.+|++++++++||+|++.+. +
T Consensus 54 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~------------------------------~------------- 90 (323)
T cd05282 54 PPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG------------------------------E------------- 90 (323)
T ss_pred CCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC------------------------------C-------------
Confidence 356789999999999999999999999999976421 2
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|+|++|+.++...++++|+++++++++.+++.+.+||+++.....+.++++|||+|+ |.+|++++++|+++|+
T Consensus 91 ------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~ 164 (323)
T cd05282 91 ------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF 164 (323)
T ss_pred ------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC
Confidence 389999999999999999999999999998899999998878788899999999987 8999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+++++.+++++.+.++++|++++++..+ .++.+.+++.+++ ++|++|||.++.. ....+++++++ |+++.+|.
T Consensus 165 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-g~~v~~g~ 238 (323)
T cd05282 165 -KTINVVRRDEQVEELKALGADEVIDSSP---EDLAQRVKEATGGAGARLALDAVGGES-ATRLARSLRPG-GTLVNYGL 238 (323)
T ss_pred -eEEEEecChHHHHHHHhcCCCEEecccc---hhHHHHHHHHhcCCCceEEEECCCCHH-HHHHHHhhCCC-CEEEEEcc
Confidence 8999999999999999999999998876 6788888888887 9999999999987 67889999998 99999987
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCC-------CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
.... ...++...+..++.++.+........ .+.++.+++++.++.+.+. +.+.|+++++++|++.+.+++
T Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~ 315 (323)
T cd05282 239 LSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTP--VGAKFPLEDFEEAVAAAEQPG 315 (323)
T ss_pred CCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccC--ccceecHHHHHHHHHHHhcCC
Confidence 5432 34555555554788888876544321 1247778899999976543 568899999999999998876
Q ss_pred ee-EEEEE
Q 020435 317 CL-RCVIW 323 (326)
Q Consensus 317 ~~-k~vv~ 323 (326)
.. |++++
T Consensus 316 ~~~kvv~~ 323 (323)
T cd05282 316 RGGKVLLT 323 (323)
T ss_pred CCceEeeC
Confidence 65 87763
No 92
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.97 E-value=7.9e-30 Score=230.36 Aligned_cols=256 Identities=25% Similarity=0.364 Sum_probs=210.8
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 87 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 87 (326)
+|.++|||++|+|+++|++++++++||+|+... .
T Consensus 51 ~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-------------------------------~--------------- 84 (312)
T cd08269 51 EPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-------------------------------G--------------- 84 (312)
T ss_pred CCcccceeeEEEEEEECCCCcCCCCCCEEEEec-------------------------------C---------------
Confidence 588999999999999999999999999997531 1
Q ss_pred ccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCE-
Q 020435 88 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATR- 166 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~- 166 (326)
|+|++|+.++++.++++|+++ ..++....++++|++++. ..+++++++|||+|+|.+|++++++|+..|+ +
T Consensus 85 ----g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~-~~ 156 (312)
T cd08269 85 ----GAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGA-RR 156 (312)
T ss_pred ----CcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-cE
Confidence 389999999999999999998 233332367889998764 7889999999999889999999999999999 6
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+++.+++++.++++++|++++++... .++.+.+++++++ ++|+++||.|........+++++++ |+++.+|...
T Consensus 157 v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~ 232 (312)
T cd08269 157 VIAIDRRPARLALARELGATEVVTDDS---EAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ 232 (312)
T ss_pred EEEECCCHHHHHHHHHhCCceEecCCC---cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC
Confidence 999999999999989999999998766 7788889888877 9999999998776688999999998 9999998653
Q ss_pred CCCcccccHHHHHhcCCEEEeeeccCC-CCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce--eEEEE
Q 020435 246 PGSQLSLSSFEVLHSGKILMGSLFGGL-KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC--LRCVI 322 (326)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~--~k~vv 322 (326)
.....+++..+..+++.+.++..... ...+.+++++++++++.+.+...+.+.|++++++++++.+.+++. +|+++
T Consensus 233 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 233 -DGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred -CCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 33345555556667888777643322 123578899999999987764445688999999999999998864 58876
No 93
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.97 E-value=4e-30 Score=235.44 Aligned_cols=260 Identities=22% Similarity=0.264 Sum_probs=213.5
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 87 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 87 (326)
+|.++|||++|+|+++|++++.+++||+|++... ..
T Consensus 63 ~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~-----------------------------~~--------------- 98 (341)
T cd08290 63 PPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRP-----------------------------GL--------------- 98 (341)
T ss_pred CCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCC-----------------------------CC---------------
Confidence 6789999999999999999999999999975321 12
Q ss_pred ccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 020435 88 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 166 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~ 166 (326)
|+|++|+.++.+.++++|+++++++++++++.++|||+++.....++++++|||+|+ |++|++++|+|++.|+ +
T Consensus 99 ----g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~ 173 (341)
T cd08290 99 ----GTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-K 173 (341)
T ss_pred ----ccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-e
Confidence 399999999999999999999999999999999999998877788999999999987 9999999999999999 8
Q ss_pred EEEEcCCh----hHHHHHHhcCCcEEEcCCCCCCc---cHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 167 IIGVDVIS----EKFEIGKRFGVTEFVNSKNCGDK---SVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 167 V~~~~~~~----~~~~~~~~~g~~~vi~~~~~~~~---~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
|++++.++ ++.+.++++|++++++..+ . ++.+.++..+++++|++|||.|+.. +...+++++++ |+++
T Consensus 174 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v 248 (341)
T cd08290 174 TINVVRDRPDLEELKERLKALGADHVLTEEE---LRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG-GTMV 248 (341)
T ss_pred EEEEEcCCCcchhHHHHHHhcCCCEEEeCcc---cccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC-CEEE
Confidence 88888766 6678888899999998776 4 6777777776558999999999987 77899999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCCCC-------CCCHHHHHHHHhCCCCCCCcceeeee---ccccHHHHH
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEM---KFEEINSAF 309 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~i~~a~ 309 (326)
.++.... ....++...++.++.++.+........ ...+..+++++.++.+.+. ....+ +++++++++
T Consensus 249 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~ 325 (341)
T cd08290 249 TYGGMSG-QPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDAL 325 (341)
T ss_pred EEeccCC-CCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHH
Confidence 9986432 233455545567788888876433210 1147788999999977654 33566 999999999
Q ss_pred HHHHcCcee-EEEEEe
Q 020435 310 DLLIKGKCL-RCVIWM 324 (326)
Q Consensus 310 ~~~~~~~~~-k~vv~~ 324 (326)
+.+.+++.. |+++.+
T Consensus 326 ~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 326 ANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHhhcCCCCeEEEeC
Confidence 999887765 888763
No 94
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.97 E-value=2.4e-30 Score=235.52 Aligned_cols=268 Identities=16% Similarity=0.229 Sum_probs=212.1
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
.++...+|.++|||++|+|+.+|++++.+++||+|+... ...
T Consensus 51 ~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-----------------------------~~~--------- 92 (327)
T PRK10754 51 LYPPPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQ-----------------------------SAL--------- 92 (327)
T ss_pred CCCCCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECC-----------------------------CCC---------
Confidence 344455788999999999999999999999999996421 011
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGAR 160 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~ 160 (326)
|+|++|+.++.+.++++|+++++++++.+++.+.+||.++.+..+++++++|+|+|+ |.+|++++++|+
T Consensus 93 ----------g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak 162 (327)
T PRK10754 93 ----------GAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAK 162 (327)
T ss_pred ----------cceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHH
Confidence 389999999999999999999999999988899999998877788999999999975 999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
..|+ +|++++.++++.+.++++|++++++.++ .++.+.+++.+++ ++|++|||.++.. ....+++++++ |+++
T Consensus 163 ~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v 236 (327)
T PRK10754 163 ALGA-KLIGTVGSAQKAQRAKKAGAWQVINYRE---ENIVERVKEITGGKKVRVVYDSVGKDT-WEASLDCLQRR-GLMV 236 (327)
T ss_pred HcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCCC---CcHHHHHHHHcCCCCeEEEEECCcHHH-HHHHHHHhccC-CEEE
Confidence 9999 8999999999999999999999998877 7788889998887 9999999999866 88899999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEE-Eeeec-cCCCCCC----CHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHH
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKIL-MGSLF-GGLKAKS----DIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 313 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i-~~~~~-~~~~~~~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~ 313 (326)
.+|.... ....+....+..++... ..... +.....+ .++.+++++.+|.+++...+.+.|++++++++++.+.
T Consensus 237 ~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~ 315 (327)
T PRK10754 237 SFGNASG-PVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILE 315 (327)
T ss_pred EEccCCC-CCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHH
Confidence 9986532 11223333222222111 11100 0011111 2456789999998876555568999999999999998
Q ss_pred cCcee-EEEEEe
Q 020435 314 KGKCL-RCVIWM 324 (326)
Q Consensus 314 ~~~~~-k~vv~~ 324 (326)
+++.. |+++.+
T Consensus 316 ~~~~~~~~~~~~ 327 (327)
T PRK10754 316 SRATQGSSLLIP 327 (327)
T ss_pred cCCCcceEEEeC
Confidence 87765 999863
No 95
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=99.97 E-value=3.1e-30 Score=233.48 Aligned_cols=225 Identities=22% Similarity=0.323 Sum_probs=177.5
Q ss_pred ccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhc------ccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 92 SSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA------NVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 92 g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~------~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|+|+||..+|+..++++|+++++++||+++.++.|||.+++... +.++|++|||+|+ |++|++++|+|++.++
T Consensus 104 g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~ 183 (347)
T KOG1198|consen 104 GGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA 183 (347)
T ss_pred CceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC
Confidence 39999999999999999999999999999999999999999999 9999999999976 8999999999999996
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
..+++++++++.++++++|+++++|+++ .++.+.+.+.+++++|+||||+|+.. ......++... |+...++..
T Consensus 184 -~~v~t~~s~e~~~l~k~lGAd~vvdy~~---~~~~e~~kk~~~~~~DvVlD~vg~~~-~~~~~~~l~~~-g~~~~i~~~ 257 (347)
T KOG1198|consen 184 -IKVVTACSKEKLELVKKLGADEVVDYKD---ENVVELIKKYTGKGVDVVLDCVGGST-LTKSLSCLLKG-GGGAYIGLV 257 (347)
T ss_pred -cEEEEEcccchHHHHHHcCCcEeecCCC---HHHHHHHHhhcCCCccEEEECCCCCc-cccchhhhccC-CceEEEEec
Confidence 5666666999999999999999999999 99999999999449999999999987 77777788886 764444432
Q ss_pred CCCCcccccHH----HHHhc---CCEEEee--ec-cCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHc
Q 020435 245 QPGSQLSLSSF----EVLHS---GKILMGS--LF-GGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIK 314 (326)
Q Consensus 245 ~~~~~~~~~~~----~~~~~---~~~i~~~--~~-~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~ 314 (326)
. +........ .+... ...+.+. +. -.....+.++.+.++++++ ++++.+.++||++++.+|++.+.+
T Consensus 258 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~g--kikp~i~~~~p~~~~~ea~~~~~~ 334 (347)
T KOG1198|consen 258 G-DELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKG--KIKPVIDSVYPFSQAKEAFEKLEK 334 (347)
T ss_pred c-ccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcC--cccCCcceeeeHHHHHHHHHHHhh
Confidence 2 111111111 01110 1111110 00 0112245688899999999 555668899999999999999999
Q ss_pred Ccee-EEEEEeC
Q 020435 315 GKCL-RCVIWMG 325 (326)
Q Consensus 315 ~~~~-k~vv~~~ 325 (326)
+... |+++.++
T Consensus 335 ~~~~GK~vl~~~ 346 (347)
T KOG1198|consen 335 SHATGKVVLEKD 346 (347)
T ss_pred cCCcceEEEEec
Confidence 7765 9999875
No 96
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.97 E-value=2.4e-29 Score=214.77 Aligned_cols=263 Identities=21% Similarity=0.241 Sum_probs=217.4
Q ss_pred CCCCCCcccCCceeEEEEEe--cCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 4 FPAVFPRILGHEAIGVVESV--GENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~--G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
|....|+-+|-..+|.++.. -|+..+|++||.|+..
T Consensus 63 ~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~------------------------------------------ 100 (340)
T COG2130 63 PSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV------------------------------------------ 100 (340)
T ss_pred cccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec------------------------------------------
Confidence 34467788888777666653 3567889999999653
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCcc--ccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPN--RACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEG 158 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~--~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~l 158 (326)
.+|+||..++.+.+.|++++.-+. ....+.++..|||.++++.+++++|++|+|.|| |++|..+.|+
T Consensus 101 ----------~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQi 170 (340)
T COG2130 101 ----------SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQI 170 (340)
T ss_pred ----------ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHH
Confidence 179999999999999997653222 233477799999999999999999999999986 9999999999
Q ss_pred HHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcE
Q 020435 159 ARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGK 237 (326)
Q Consensus 159 a~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~ 237 (326)
||..|+ +|++++.++||.+++++ +|.|.+||+.. +++.+.+.+..+.|+|+.||++|++. +...+..|+.. ++
T Consensus 171 AKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~---~d~~~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~-aR 244 (340)
T COG2130 171 AKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA---EDFAQALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF-AR 244 (340)
T ss_pred HHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc---ccHHHHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc-cc
Confidence 999999 99999999999999988 99999999999 89999999999999999999999999 99999999998 99
Q ss_pred EEEeccCCC--CCcc---cccHHHHHhcCCEEEeeeccC-CCC--CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHH
Q 020435 238 TIVLGVDQP--GSQL---SLSSFEVLHSGKILMGSLFGG-LKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAF 309 (326)
Q Consensus 238 ~v~~g~~~~--~~~~---~~~~~~~~~~~~~i~~~~~~~-~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~ 309 (326)
++.+|.... .... .-....++.+++++.|+.+.+ +.. .+..+++.+++.+|++..+. +-.=.++++++||
T Consensus 245 i~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~e--ti~dGlEnaP~Af 322 (340)
T COG2130 245 IPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRE--TIVDGLENAPEAF 322 (340)
T ss_pred eeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEe--eehhhhhccHHHH
Confidence 999996432 1111 223344666799999998733 221 24578899999999998885 3344699999999
Q ss_pred HHHHcCcee-EEEEEeCC
Q 020435 310 DLLIKGKCL-RCVIWMGE 326 (326)
Q Consensus 310 ~~~~~~~~~-k~vv~~~~ 326 (326)
.-+-++++. |+++++.+
T Consensus 323 ~gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 323 IGLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHHhcCCccceEEEEecC
Confidence 999999987 99999864
No 97
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.97 E-value=3.8e-29 Score=226.42 Aligned_cols=263 Identities=24% Similarity=0.335 Sum_probs=207.9
Q ss_pred CCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCc
Q 020435 4 FPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGE 83 (326)
Q Consensus 4 ~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~ 83 (326)
+....|.++|||++|+|+++|+ ..+++||+|+..... ++...+|
T Consensus 52 ~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~------------------------~~~~~~g---------- 95 (320)
T cd08243 52 PSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGG------------------------MGRTFDG---------- 95 (320)
T ss_pred CCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCC------------------------CCCCCCc----------
Confidence 3345678999999999999995 579999999764210 1112233
Q ss_pred ccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 020435 84 TIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC 162 (326)
Q Consensus 84 ~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~ 162 (326)
+|++|+.++...++++|+++++++++.+++++.|||+++.+..+++++++|||+|+ |++|++++++|++.
T Consensus 96 ---------~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~ 166 (320)
T cd08243 96 ---------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKAL 166 (320)
T ss_pred ---------ccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999998888888999999999997 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+ +|++++.++++.+.++++|++++++. . .++.+.++++ ++++|+++||.++.. +...+++++++ |+++.+|
T Consensus 167 g~-~v~~~~~~~~~~~~~~~~g~~~~~~~-~---~~~~~~i~~~-~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g 238 (320)
T cd08243 167 GA-TVTATTRSPERAALLKELGADEVVID-D---GAIAEQLRAA-PGGFDKVLELVGTAT-LKDSLRHLRPG-GIVCMTG 238 (320)
T ss_pred CC-EEEEEeCCHHHHHHHHhcCCcEEEec-C---ccHHHHHHHh-CCCceEEEECCChHH-HHHHHHHhccC-CEEEEEc
Confidence 99 89999999999999999999888754 4 4677778877 449999999999865 88999999998 9999998
Q ss_pred cCCCCCcc-cccHHHHH--hcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 243 VDQPGSQL-SLSSFEVL--HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 243 ~~~~~~~~-~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
........ ........ .+++++.++..... ....+++++++++++.+++. ..+.++++++++|++.+.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~a~~~~~~~~~~~ 315 (320)
T cd08243 239 LLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDV-PQTPLQELFDFVAAGHLDIP--PSKVFTFDEIVEAHAYMESNRAFG 315 (320)
T ss_pred cCCCCcccCCcchhhhhhhccceEEEecchhhh-hHHHHHHHHHHHHCCceecc--cccEEcHHHHHHHHHHHHhCCCCC
Confidence 64322111 11222222 45666666542221 12357788999999976643 55889999999999999887665
Q ss_pred EEEE
Q 020435 319 RCVI 322 (326)
Q Consensus 319 k~vv 322 (326)
|+++
T Consensus 316 kvvv 319 (320)
T cd08243 316 KVVV 319 (320)
T ss_pred cEEe
Confidence 7765
No 98
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=8.8e-29 Score=220.09 Aligned_cols=250 Identities=27% Similarity=0.409 Sum_probs=198.4
Q ss_pred CCCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 020435 2 KDFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLR 81 (326)
Q Consensus 2 ~~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~ 81 (326)
.+| .++|.++|||++|+|+++|++++++++||+|+..
T Consensus 15 ~~~-~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~------------------------------------------ 51 (277)
T cd08255 15 TEK-LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF------------------------------------------ 51 (277)
T ss_pred Ccc-CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec------------------------------------------
Confidence 345 4499999999999999999999999999999653
Q ss_pred CcccccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHH
Q 020435 82 GETIHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARL 161 (326)
Q Consensus 82 ~~~~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~ 161 (326)
+.|++|+.++.+.++++|+++++++++.+ +.++|||+++ ...++++++++||+|+|++|++++++|+.
T Consensus 52 ----------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~ 119 (277)
T cd08255 52 ----------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKA 119 (277)
T ss_pred ----------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 16889999999999999999999999888 7899999975 57889999999999889999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcC-CcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEE
Q 020435 162 CGATRIIGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTI 239 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v 239 (326)
+|+.+|+++++++++.+.++++| ++++++..+ ..+.+ ++|++|||.+........+++++++ |+++
T Consensus 120 ~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~ 187 (277)
T cd08255 120 AGAREVVGVDPDAARRELAEALGPADPVAADTA-----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVV 187 (277)
T ss_pred cCCCcEEEECCCHHHHHHHHHcCCCccccccch-----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEE
Confidence 99933999999999999989998 555554322 11234 8999999988766688999999998 9999
Q ss_pred EeccCCCCCcccccHHHHHhcCCEEEeeeccCC---------CCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHH
Q 020435 240 VLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFD 310 (326)
Q Consensus 240 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~ 310 (326)
.+|..... .......+..+..++.+...... ...+.+++++++++++.++. .+.+.|+++++++|++
T Consensus 188 ~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~ 263 (277)
T cd08255 188 LVGWYGLK--PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEA--LITHRVPFEDAPEAYR 263 (277)
T ss_pred EEeccCCC--ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCccc--cccCccCHHHHHHHHH
Confidence 99875332 11122233445556666543221 11256899999999997553 3568899999999999
Q ss_pred HHHcC--ceeEEEE
Q 020435 311 LLIKG--KCLRCVI 322 (326)
Q Consensus 311 ~~~~~--~~~k~vv 322 (326)
.+.++ ...|+++
T Consensus 264 ~~~~~~~~~~k~~~ 277 (277)
T cd08255 264 LLFEDPPECLKVVL 277 (277)
T ss_pred HHHcCCccceeeeC
Confidence 99887 4447764
No 99
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.97 E-value=1e-28 Score=224.94 Aligned_cols=258 Identities=24% Similarity=0.281 Sum_probs=208.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+.+|++++++++||+|++.. .
T Consensus 58 ~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-------------------------------~------------- 93 (329)
T cd08250 58 VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMS-------------------------------F------------- 93 (329)
T ss_pred CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEec-------------------------------C-------------
Confidence 45789999999999999999999999999997531 1
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|+|++|++++.+.++++|++ +.+++++++.+.|||+++.+..+++++++|+|+|+ |.+|++++++|+..|+
T Consensus 94 ------g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~ 165 (329)
T cd08250 94 ------GAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC 165 (329)
T ss_pred ------cceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC
Confidence 38999999999999999997 35677888899999998888888999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++++|++.+++.++ .++.+.+.+..++++|++|||.++.. ....+++++++ |+++.+|..
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~~~~~~vd~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~ 239 (329)
T cd08250 166 -HVIGTCSSDEKAEFLKSLGCDRPINYKT---EDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLALK-GRLIVIGFI 239 (329)
T ss_pred -eEEEEeCcHHHHHHHHHcCCceEEeCCC---ccHHHHHHHhcCCCCeEEEECCcHHH-HHHHHHHhccC-CeEEEEecc
Confidence 8999999999999999999988888776 66767776665458999999999755 88999999998 999999864
Q ss_pred CCC---------CcccccHHHHHhcCCEEEeeeccCCC--CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHH
Q 020435 245 QPG---------SQLSLSSFEVLHSGKILMGSLFGGLK--AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLI 313 (326)
Q Consensus 245 ~~~---------~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~ 313 (326)
... ....++ ...+.++.++.++...... ..+.+.+++++++++.+.+.....+.++++++++|++.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~ 318 (329)
T cd08250 240 SGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLY 318 (329)
T ss_pred cCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHH
Confidence 321 111222 2335567888877533211 1234778899999997766433446689999999999999
Q ss_pred cCcee-EEEE
Q 020435 314 KGKCL-RCVI 322 (326)
Q Consensus 314 ~~~~~-k~vv 322 (326)
+++.. |+++
T Consensus 319 ~~~~~~kvvv 328 (329)
T cd08250 319 SGKNIGKVVV 328 (329)
T ss_pred cCCCCceEEe
Confidence 87665 8776
No 100
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.97 E-value=7.2e-29 Score=223.47 Aligned_cols=250 Identities=20% Similarity=0.255 Sum_probs=203.4
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 87 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 87 (326)
.|.++|||++|+|+++|+++++|++||+|+... .+
T Consensus 51 ~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~------------------------------~~--------------- 85 (305)
T cd08270 51 DGAVPGWDAAGVVERAAADGSGPAVGARVVGLG------------------------------AM--------------- 85 (305)
T ss_pred CCCcccceeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC---------------
Confidence 367899999999999999999999999996421 12
Q ss_pred ccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 020435 88 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 166 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~ 166 (326)
|+|++|+.++.+.++++|+++++++++++++.+.|||+++.+.... ++++|+|+|+ |++|++++++++..|+ +
T Consensus 86 ----g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~ 159 (305)
T cd08270 86 ----GAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-H 159 (305)
T ss_pred ----cceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-E
Confidence 3999999999999999999999999999999999999987655545 5999999987 9999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
|+.+++++++.+.++++|++.+++... + +.++++|+++||.|+.. ...++++++.+ |+++.+|...
T Consensus 160 v~~~~~~~~~~~~~~~~g~~~~~~~~~----~-------~~~~~~d~vl~~~g~~~-~~~~~~~l~~~-G~~v~~g~~~- 225 (305)
T cd08270 160 VVAVVGSPARAEGLRELGAAEVVVGGS----E-------LSGAPVDLVVDSVGGPQ-LARALELLAPG-GTVVSVGSSS- 225 (305)
T ss_pred EEEEeCCHHHHHHHHHcCCcEEEeccc----c-------ccCCCceEEEECCCcHH-HHHHHHHhcCC-CEEEEEeccC-
Confidence 999999999999999999876654322 1 22247999999999876 89999999998 9999998653
Q ss_pred CCcccccHHHHHh--cCCEEEeeeccC-CCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEE
Q 020435 247 GSQLSLSSFEVLH--SGKILMGSLFGG-LKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 247 ~~~~~~~~~~~~~--~~~~i~~~~~~~-~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv 322 (326)
.....++...+.. ++.++.++.... ....+.+..++++++++++++. +.+.+++++++++++.+.+++.. |+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi 303 (305)
T cd08270 226 GEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPR--IGWRGSWTEIDEAAEALLARRFRGKAVL 303 (305)
T ss_pred CCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccce--eccEEcHHHHHHHHHHHHcCCCCceEEE
Confidence 2334445554444 578888776542 1112457888999999988754 66899999999999999887765 9888
Q ss_pred Ee
Q 020435 323 WM 324 (326)
Q Consensus 323 ~~ 324 (326)
.+
T Consensus 304 ~~ 305 (305)
T cd08270 304 DV 305 (305)
T ss_pred eC
Confidence 64
No 101
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.97 E-value=1.5e-28 Score=223.47 Aligned_cols=263 Identities=18% Similarity=0.224 Sum_probs=199.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|++.| ++++++||+|++.+. ..|...+|
T Consensus 56 ~~~~~~g~e~~G~V~~~~--~~~~~~Gd~V~~~~~------------------------~~~~~~~g------------- 96 (326)
T cd08289 56 RYPFIPGIDLAGTVVESN--DPRFKPGDEVIVTSY------------------------DLGVSHHG------------- 96 (326)
T ss_pred CCCcCcccceeEEEEEcC--CCCCCCCCEEEEccc------------------------ccCCCCCC-------------
Confidence 458999999999999954 578999999976432 02222334
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhc--c-cCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA--N-VEVGSTVVIFGL-GSIGLAVAEGARLC 162 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~--~-~~~~~~vlI~Ga-g~~G~~a~~la~~~ 162 (326)
+|++|+.++++.++++|+++++++++.+++.+.|||+++.... . ...+++|||+|+ |.+|++++|+|++.
T Consensus 97 ------~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (326)
T cd08289 97 ------GYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKL 170 (326)
T ss_pred ------cceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999998765432 2 334789999997 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+ +|+++++++++.+.++++|++++++.++ . ..+.+++..++++|++|||.++.. +...+++++++ |+++.+|
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~i~~g 243 (326)
T cd08289 171 GY-EVVASTGKADAADYLKKLGAKEVIPREE---L-QEESIKPLEKQRWAGAVDPVGGKT-LAYLLSTLQYG-GSVAVSG 243 (326)
T ss_pred CC-eEEEEecCHHHHHHHHHcCCCEEEcchh---H-HHHHHHhhccCCcCEEEECCcHHH-HHHHHHHhhcC-CEEEEEe
Confidence 99 8999999999999999999999988765 3 345566664348999999999865 88999999998 9999999
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCC---CCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELE---LDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
... ....++....++.+++++.+....... ......+++.+.+ .+. ....+.+.|+++++++|++.+.+++..
T Consensus 244 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~g 320 (326)
T cd08289 244 LTG-GGEVETTVFPFILRGVNLLGIDSVECP-MELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRVTG 320 (326)
T ss_pred ecC-CCCCCcchhhhhhccceEEEEEeEecC-chHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcccc
Confidence 752 223344455555778888887432110 1112223322221 111 112346899999999999999988776
Q ss_pred EEEEEe
Q 020435 319 RCVIWM 324 (326)
Q Consensus 319 k~vv~~ 324 (326)
|+++++
T Consensus 321 kvvv~~ 326 (326)
T cd08289 321 RTVVKL 326 (326)
T ss_pred eEEEeC
Confidence 888763
No 102
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.97 E-value=2.5e-28 Score=221.88 Aligned_cols=261 Identities=20% Similarity=0.213 Sum_probs=200.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++ +++.+++||+|++... .+|+..+|
T Consensus 56 ~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~------------------------~~g~~~~g------------- 96 (325)
T cd05280 56 NYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGY------------------------DLGMNTDG------------- 96 (325)
T ss_pred CCCCccCcccEEEEEEe--CCCCCCCCCEEEEccc------------------------ccCCCCCc-------------
Confidence 46889999999999999 4678999999976421 03444445
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcc--cC-CCCEEEEEcc-CHHHHHHHHHHHHc
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN--VE-VGSTVVIFGL-GSIGLAVAEGARLC 162 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~--~~-~~~~vlI~Ga-g~~G~~a~~la~~~ 162 (326)
+|++|++++++.++++|+++++++++.+++.+.|||+++....+ +. .+++|+|+|+ |.+|++++++|+.+
T Consensus 97 ------~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~ 170 (325)
T cd05280 97 ------GFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKL 170 (325)
T ss_pred ------eeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999998755443 35 3579999997 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
|+ +|+++++++++.+.++++|++++++..+ . ...+.+...+ ++|++|||.++.. +..++++++++ |+++.+
T Consensus 171 g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~--~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~ 242 (325)
T cd05280 171 GY-TVVALTGKEEQADYLKSLGASEVLDRED---L--LDESKKPLLKARWAGAIDTVGGDV-LANLLKQTKYG-GVVASC 242 (325)
T ss_pred CC-EEEEEeCCHHHHHHHHhcCCcEEEcchh---H--HHHHHHHhcCCCccEEEECCchHH-HHHHHHhhcCC-CEEEEE
Confidence 99 8999999999999999999999987654 2 2233333444 8999999999866 89999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCC---CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
|..... ...++...++.+++++.+........ .+.++.+.+++..+.. ..+...|++++++++++.+.+++..
T Consensus 243 g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~ 318 (325)
T cd05280 243 GNAAGP-ELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDLL---EIVVREISLEELPEAIDRLLAGKHR 318 (325)
T ss_pred ecCCCC-ccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCCc---cceeeEecHHHHHHHHHHHhcCCcc
Confidence 875322 22444444546788888875443211 0123334445555522 2366899999999999999988766
Q ss_pred -EEEEEe
Q 020435 319 -RCVIWM 324 (326)
Q Consensus 319 -k~vv~~ 324 (326)
|+++++
T Consensus 319 gk~vv~~ 325 (325)
T cd05280 319 GRTVVKI 325 (325)
T ss_pred eEEEEeC
Confidence 888763
No 103
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.97 E-value=3.8e-28 Score=219.21 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=214.4
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|++++++++||+|+... ..
T Consensus 53 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~------------------------------~~-------------- 88 (320)
T cd05286 53 PLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG------------------------------PP-------------- 88 (320)
T ss_pred CCCccCCcceeEEEEEECCCCCCCCCCCEEEEec------------------------------CC--------------
Confidence 4577999999999999999999999999996531 11
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|++++|+.++.+.++++|++++.++++.+.+.+.++|+++.+..++.++++|||+|+ |++|++++++++.+|+
T Consensus 89 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~- 162 (320)
T cd05286 89 -----GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA- 162 (320)
T ss_pred -----CceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998878888999999999996 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|++++.++++.+.++++|++++++..+ .++.+.+++++.+ ++|++|||.++.. ...++++++++ |+++.+|..
T Consensus 163 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 237 (320)
T cd05286 163 TVIGTVSSEEKAELARAAGADHVINYRD---EDFVERVREITGGRGVDVVYDGVGKDT-FEGSLDSLRPR-GTLVSFGNA 237 (320)
T ss_pred EEEEEcCCHHHHHHHHHCCCCEEEeCCc---hhHHHHHHHHcCCCCeeEEEECCCcHh-HHHHHHhhccC-cEEEEEecC
Confidence 8999999999999999999999988776 6788888888877 9999999999865 88999999998 999999864
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCCC-----CCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKAK-----SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
... ...++...+..+++++.+......... +.+.++++++.++.+++. ..+.|++++++++++.+.++...
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~~~ 314 (320)
T cd05286 238 SGP-VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKTTG 314 (320)
T ss_pred CCC-CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCCCc
Confidence 322 233444444467888766543322111 224568888988876654 55889999999999999987765
Q ss_pred EEEEEe
Q 020435 319 RCVIWM 324 (326)
Q Consensus 319 k~vv~~ 324 (326)
|+++++
T Consensus 315 ~vv~~~ 320 (320)
T cd05286 315 KLLLIP 320 (320)
T ss_pred eEEEeC
Confidence 888764
No 104
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.97 E-value=4.1e-28 Score=222.11 Aligned_cols=261 Identities=23% Similarity=0.320 Sum_probs=204.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|++++.+++||+|+..+...|+ +...+
T Consensus 53 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~----------------------~~~~~-------------- 96 (339)
T cd08249 53 SYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNP----------------------NDPRN-------------- 96 (339)
T ss_pred CCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccC----------------------CCCCC--------------
Confidence 357899999999999999999999999999875432221 11122
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhccc----------CCCCEEEEEcc-CHHHHHH
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----------EVGSTVVIFGL-GSIGLAV 155 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~----------~~~~~vlI~Ga-g~~G~~a 155 (326)
|+|++|++++.+.++++|+++++++++++++.+.|||+++.+..++ .++++|||+|+ |.+|+++
T Consensus 97 -----g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~ 171 (339)
T cd08249 97 -----GAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLA 171 (339)
T ss_pred -----CcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHH
Confidence 3999999999999999999999999999999999999987666544 78999999997 8999999
Q ss_pred HHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhc--
Q 020435 156 AEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRK-- 233 (326)
Q Consensus 156 ~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~-- 233 (326)
+++|++.|+ +|+.+. ++++.+.++++|++++++..+ .++.+.+++.+++++|++||+.+++..+..+++++++
T Consensus 172 ~~~a~~~G~-~v~~~~-~~~~~~~~~~~g~~~v~~~~~---~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~ 246 (339)
T cd08249 172 IQLAKLAGY-KVITTA-SPKNFDLVKSLGADAVFDYHD---PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSG 246 (339)
T ss_pred HHHHHHcCC-eEEEEE-CcccHHHHHhcCCCEEEECCC---chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccC
Confidence 999999999 888887 568888889999999999877 7788888887766999999999985558999999999
Q ss_pred CCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCC---------CCCCCHHHHHHHHhCCCCCCCcceeeeec--c
Q 020435 234 GWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGL---------KAKSDIPILLKRYMDKELELDKFVTHEMK--F 302 (326)
Q Consensus 234 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~l~~~g~~~~~~~i~~~~~--l 302 (326)
+ |+++.++...... .+ ..+........... .....++.++++++++.+.+. ....++ +
T Consensus 247 ~-g~~v~~g~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~ 315 (339)
T cd08249 247 G-GKLVSLLPVPEET--EP------RKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPH--PVRVVEGGL 315 (339)
T ss_pred C-CEEEEecCCCccc--cC------CCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCC--CceecCCcH
Confidence 9 9999998653221 01 11122111111100 011246678899999987765 235667 9
Q ss_pred ccHHHHHHHHHcCc-ee-EEEEEe
Q 020435 303 EEINSAFDLLIKGK-CL-RCVIWM 324 (326)
Q Consensus 303 ~~i~~a~~~~~~~~-~~-k~vv~~ 324 (326)
+++++|++.+.+++ .. |+++++
T Consensus 316 ~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 316 EGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHHHHHCCCccceEEEEeC
Confidence 99999999999888 65 998863
No 105
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.96 E-value=1e-27 Score=217.88 Aligned_cols=261 Identities=20% Similarity=0.222 Sum_probs=202.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+. .++++|++||+|++... ..|....|
T Consensus 54 ~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~------------------------~~~~~~~g------------ 95 (323)
T TIGR02823 54 RSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGY------------------------GLGVSHDG------------ 95 (323)
T ss_pred CCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccC------------------------CCCCCCCc------------
Confidence 35689999999999998 56778999999976421 02222234
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhh--hcccCCCC-EEEEEcc-CHHHHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR--TANVEVGS-TVVIFGL-GSIGLAVAEGARL 161 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~--~~~~~~~~-~vlI~Ga-g~~G~~a~~la~~ 161 (326)
++++|+.++.+.++++|+++++++++++++.+.+|+.++.. ..++.+++ +|+|+|+ |++|++++++|++
T Consensus 96 -------~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~ 168 (323)
T TIGR02823 96 -------GYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSK 168 (323)
T ss_pred -------cceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999887543 33478898 9999997 9999999999999
Q ss_pred cCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 162 CGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 162 ~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+ ++++++.++++.+.++++|++++++.++ .+. .++.+.++++|+++||.|+.. +..++++++++ |+++.+
T Consensus 169 ~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~~--~~~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~-G~~v~~ 240 (323)
T TIGR02823 169 LGY-EVVASTGKAEEEDYLKELGASEVIDRED---LSP--PGKPLEKERWAGAVDTVGGHT-LANVLAQLKYG-GAVAAC 240 (323)
T ss_pred cCC-eEEEEeCCHHHHHHHHhcCCcEEEcccc---HHH--HHHHhcCCCceEEEECccHHH-HHHHHHHhCCC-CEEEEE
Confidence 999 8888888888889999999988888654 332 445555447999999999876 88999999998 999999
Q ss_pred ccCCCCCcccccHHHHHhcCCEEEeeeccCCCC---CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 242 GVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 242 g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
|... .....++...++.++.++.+........ .+.++.+.+++..+.+.. . .+.|+++++++|++.+.+++..
T Consensus 241 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~~~~~a~~~~~~~~~~ 316 (323)
T TIGR02823 241 GLAG-GPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLES--I-TREITLEELPEALEQILAGQHR 316 (323)
T ss_pred cccC-CCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcC--c-eeeecHHHHHHHHHHHhCCCcc
Confidence 8753 2233444455556788888865332111 012455666777775543 3 4689999999999999988776
Q ss_pred -EEEEE
Q 020435 319 -RCVIW 323 (326)
Q Consensus 319 -k~vv~ 323 (326)
|++++
T Consensus 317 ~k~vv~ 322 (323)
T TIGR02823 317 GRTVVD 322 (323)
T ss_pred ceEEEe
Confidence 88875
No 106
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.96 E-value=1.1e-27 Score=218.64 Aligned_cols=261 Identities=20% Similarity=0.177 Sum_probs=207.2
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+.+|++++.+++||+|..... +..+|
T Consensus 57 ~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------------------------~~~~g------------ 97 (336)
T cd08252 57 PGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGD---------------------------ITRPG------------ 97 (336)
T ss_pred CCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCC---------------------------CCCCc------------
Confidence 346789999999999999999999999999975210 11223
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCC-----CCEEEEEcc-CHHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV-----GSTVVIFGL-GSIGLAVAEGA 159 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~-----~~~vlI~Ga-g~~G~~a~~la 159 (326)
+|++|+.++...++++|+++++++++.+++.+.|||+++.+.+++.+ +++|+|+|+ |++|++++++|
T Consensus 98 -------~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a 170 (336)
T cd08252 98 -------SNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLA 170 (336)
T ss_pred -------cceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHH
Confidence 89999999999999999999999999999999999998878888887 999999986 99999999999
Q ss_pred HHcC-CCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEE
Q 020435 160 RLCG-ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKT 238 (326)
Q Consensus 160 ~~~g-~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~ 238 (326)
+.+| + +|++++.++++.+.++++|++++++... ++.+.++...++++|++|||.+....+..++++++++ |++
T Consensus 171 ~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~ 244 (336)
T cd08252 171 KQLTGL-TVIATASRPESIAWVKELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHI 244 (336)
T ss_pred HHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEE
Confidence 9999 8 9999999999999999999999887653 4556666443348999999999766689999999998 999
Q ss_pred EEeccCCCCCcccccHHHHHhcCCEEEeeeccCCC--C-------CCCHHHHHHHHhCCCCCCCcc-eeeeeccccHHHH
Q 020435 239 IVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLK--A-------KSDIPILLKRYMDKELELDKF-VTHEMKFEEINSA 308 (326)
Q Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~-------~~~~~~~~~l~~~g~~~~~~~-i~~~~~l~~i~~a 308 (326)
+.+|... ..++...+..++.++.+....... . .+.++++++++.++.+++... ....++++++++|
T Consensus 245 v~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a 320 (336)
T cd08252 245 CLIVDPQ----EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREA 320 (336)
T ss_pred EEecCCC----CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHH
Confidence 9998642 233444444567777765433210 0 123678899999997764311 1245799999999
Q ss_pred HHHHHcCcee-EEEE
Q 020435 309 FDLLIKGKCL-RCVI 322 (326)
Q Consensus 309 ~~~~~~~~~~-k~vv 322 (326)
++.+.++... |+++
T Consensus 321 ~~~~~~~~~~~~vv~ 335 (336)
T cd08252 321 HALLESGKTIGKIVL 335 (336)
T ss_pred HHHHHcCCccceEEe
Confidence 9999988765 8775
No 107
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.96 E-value=1.2e-27 Score=214.80 Aligned_cols=259 Identities=23% Similarity=0.313 Sum_probs=206.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|+|++|+|+.+|++++++++||+|++... ..+
T Consensus 36 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----------------------------~~~-------------- 73 (303)
T cd08251 36 PYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG----------------------------ESM-------------- 73 (303)
T ss_pred CCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC----------------------------CCC--------------
Confidence 56889999999999999999999999999976421 112
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|+|++|+.++++.++++|+++++++++.+++.+.+||+++ +..+++++++|+|+|+ |.+|++++++++++|+
T Consensus 74 -----g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~- 146 (303)
T cd08251 74 -----GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA- 146 (303)
T ss_pred -----cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-
Confidence 3899999999999999999999999999999999999975 6788999999999975 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++++++++.+.++.+|++.+++... .++.+.+.+.+++ ++|+++|++++.. ....+++++++ |+++.++..
T Consensus 147 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~~ 221 (303)
T cd08251 147 EIYATASSDDKLEYLKQLGVPHVINYVE---EDFEEEIMRLTGGRGVDVVINTLSGEA-IQKGLNCLAPG-GRYVEIAMT 221 (303)
T ss_pred EEEEEcCCHHHHHHHHHcCCCEEEeCCC---ccHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHHhccC-cEEEEEecc
Confidence 8999999999999999999999998876 6788888888887 9999999998755 88899999998 999999864
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCC--C----CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGL--K----AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~----~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
.......+....+. ++..+........ . ..+.+.+++++++++.++. ..++.|++++++++++.+.+++..
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 298 (303)
T cd08251 222 ALKSAPSVDLSVLS-NNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRP--TVSRIFPFDDIGEAYRYLSDRENI 298 (303)
T ss_pred CCCccCccChhHhh-cCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccC--CCceEEcHHHHHHHHHHHHhCCCc
Confidence 32222233333322 2333332211110 0 1124667888999997654 356889999999999999887665
Q ss_pred -EEEE
Q 020435 319 -RCVI 322 (326)
Q Consensus 319 -k~vv 322 (326)
|+++
T Consensus 299 ~~iv~ 303 (303)
T cd08251 299 GKVVV 303 (303)
T ss_pred ceEeC
Confidence 7653
No 108
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.96 E-value=1.3e-27 Score=216.02 Aligned_cols=259 Identities=21% Similarity=0.286 Sum_probs=213.4
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+.+|++++.+++||+|+.. ..+|
T Consensus 55 ~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~------------------------------~~~g------------ 92 (323)
T cd05276 55 PGASDILGLEVAGVVVAVGPGVTGWKVGDRVCAL------------------------------LAGG------------ 92 (323)
T ss_pred CCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEe------------------------------cCCC------------
Confidence 3568899999999999999999999999999653 1223
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
+|++|+.++.+.++++|+++++++++.+...+.++|+++.+...+.++++|+|+|+ |++|+++++++++.|+
T Consensus 93 -------~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~ 165 (323)
T cd05276 93 -------GYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA 165 (323)
T ss_pred -------ceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC
Confidence 89999999999999999999999999999999999998877788999999999997 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+++++++++.+.++++|++.+++... .++.+.+.+...+ ++|++||+.++.. ....++++.++ |+++.++.
T Consensus 166 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~-g~~i~~~~ 239 (323)
T cd05276 166 -RVIATAGSEEKLEACRALGADVAINYRT---EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD-GRLVLIGL 239 (323)
T ss_pred -EEEEEcCCHHHHHHHHHcCCCEEEeCCc---hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC-CEEEEEec
Confidence 8999999999999898899888888776 6777788887766 9999999999877 88899999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCCCC-------CCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLKAK-------SDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
... ....++...++.+++++.++........ ..+.++++++.++.+.+ ..++.|++++++++++.+.++.
T Consensus 240 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~a~~~~~~~~ 316 (323)
T cd05276 240 LGG-AKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP--VIDKVFPLEEAAEAHRRMESNE 316 (323)
T ss_pred CCC-CCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHhCC
Confidence 432 2234455555567888888765432111 12466778888887653 3668899999999999998776
Q ss_pred ee-EEEE
Q 020435 317 CL-RCVI 322 (326)
Q Consensus 317 ~~-k~vv 322 (326)
.. |+++
T Consensus 317 ~~~kvv~ 323 (323)
T cd05276 317 HIGKIVL 323 (323)
T ss_pred CcceEeC
Confidence 55 7653
No 109
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.96 E-value=2.8e-27 Score=214.17 Aligned_cols=265 Identities=24% Similarity=0.340 Sum_probs=213.3
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+.+|+++++|++||+|++.++. . ....
T Consensus 55 ~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~------------------------~-~~~~------------- 96 (325)
T cd08253 55 PPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLG------------------------W-GRRQ------------- 96 (325)
T ss_pred CCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccc------------------------c-CCCC-------------
Confidence 3578899999999999999999999999999775310 0 0012
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|++++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++|+|+|+ |.+|++++++++..|+
T Consensus 97 ------g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~ 170 (325)
T cd08253 97 ------GTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170 (325)
T ss_pred ------cceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 389999999999999999999999999999999999998877789999999999986 9999999999999998
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+++++++++.+.++++|++++++... .++.+.+.+.+.+ ++|+++||.+... ....+++++++ |+++.++.
T Consensus 171 -~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~~~ 244 (325)
T cd08253 171 -RVIATASSAEGAELVRQAGADAVFNYRA---EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG-GRIVVYGS 244 (325)
T ss_pred -EEEEEeCCHHHHHHHHHcCCCEEEeCCC---cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC-CEEEEEee
Confidence 8999999999999998899988888776 6777888887776 9999999999876 78889999998 99999987
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCC---CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
.. ....++...++.++.++.+....... ..+.++.+.+++.++.++. ..++.+++++++++++.+.++... |
T Consensus 245 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~k 320 (325)
T cd08253 245 GG--LRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGGAIGK 320 (325)
T ss_pred cC--CcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCCCcce
Confidence 43 23344444445567777665422111 0112455667777876543 356889999999999999887665 8
Q ss_pred EEEEe
Q 020435 320 CVIWM 324 (326)
Q Consensus 320 ~vv~~ 324 (326)
+++++
T Consensus 321 vv~~~ 325 (325)
T cd08253 321 VVLDP 325 (325)
T ss_pred EEEeC
Confidence 88753
No 110
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.96 E-value=1.1e-27 Score=218.05 Aligned_cols=253 Identities=21% Similarity=0.251 Sum_probs=203.7
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 87 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 87 (326)
.+.++|+|++|+|+++|++ ++++||+|+..
T Consensus 64 ~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~------------------------------------------------ 93 (329)
T cd05288 64 LGEPMRGGGVGEVVESRSP--DFKVGDLVSGF------------------------------------------------ 93 (329)
T ss_pred CCCcccCceEEEEEecCCC--CCCCCCEEecc------------------------------------------------
Confidence 4678999999999999964 79999999542
Q ss_pred ccccccccceEEecc-cceEEcCCCCC--cccccc-ccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHc
Q 020435 88 FVSVSSFSEYTVLDI-AHVVKVDPTVP--PNRACL-LSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC 162 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~-~~~~~ip~~~s--~~~aa~-l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~ 162 (326)
++|++|+.++. +.++++|++++ ++++++ +++++.|||+++.+..++.++++|||+|+ |++|++++++|+..
T Consensus 94 ----~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~ 169 (329)
T cd05288 94 ----LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLL 169 (329)
T ss_pred ----cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHc
Confidence 27999999999 99999999995 445555 88899999998878788999999999985 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 163 GATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
|+ +|+++++++++.+.+++ +|++++++.++ .++.+.+.+.+++++|++|||+|... +..++++++++ |+++.+
T Consensus 170 G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~v~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-G~~v~~ 243 (329)
T cd05288 170 GA-RVVGIAGSDEKCRWLVEELGFDAAINYKT---PDLAEALKEAAPDGIDVYFDNVGGEI-LDAALTLLNKG-GRIALC 243 (329)
T ss_pred CC-EEEEEeCCHHHHHHHHhhcCCceEEecCC---hhHHHHHHHhccCCceEEEEcchHHH-HHHHHHhcCCC-ceEEEE
Confidence 99 89999999999999888 99999998877 67878888777559999999999865 88999999998 999999
Q ss_pred ccCCCCCcc----cccHHHHHhcCCEEEeeeccCCCC--CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcC
Q 020435 242 GVDQPGSQL----SLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKG 315 (326)
Q Consensus 242 g~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~ 315 (326)
|........ .++....+.++.++.++....... .+.+.++++++.++.+++.. ...+++++++++++.+.++
T Consensus 244 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~ 321 (329)
T cd05288 244 GAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTG 321 (329)
T ss_pred eeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcC
Confidence 864322111 123344456788887765432210 13467788999999877653 3568999999999999877
Q ss_pred cee-EEEE
Q 020435 316 KCL-RCVI 322 (326)
Q Consensus 316 ~~~-k~vv 322 (326)
+.. |+++
T Consensus 322 ~~~gkvvv 329 (329)
T cd05288 322 KNTGKLVV 329 (329)
T ss_pred CCccceeC
Confidence 655 7653
No 111
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.96 E-value=2e-27 Score=215.19 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=214.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|+++.++++||+|+... .+|
T Consensus 56 ~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~------------------------------~~~------------- 92 (325)
T TIGR02824 56 GASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV------------------------------AGG------------- 92 (325)
T ss_pred CCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc------------------------------CCC-------------
Confidence 4578999999999999999999999999996521 123
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
++++|+.++...++++|+++++.+++.+++.+.|||+++.+...+.++++++|+|+ |++|++++++++..|+
T Consensus 93 ------~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~- 165 (325)
T TIGR02824 93 ------GYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA- 165 (325)
T ss_pred ------cceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-
Confidence 89999999999999999999999999999999999998888899999999999996 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+++.+++++.+.++.+|++.+++... .++.+.+.+..++ ++|++++|.++.. ...++++++++ |+++.++..
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 240 (325)
T TIGR02824 166 RVFTTAGSDEKCAACEALGADIAINYRE---EDFVEVVKAETGGKGVDVILDIVGGSY-LNRNIKALALD-GRIVQIGFQ 240 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCcEEEecCc---hhHHHHHHHHcCCCCeEEEEECCchHH-HHHHHHhhccC-cEEEEEecC
Confidence 8999999999888888899888887766 6777788887776 8999999999865 88899999998 999999864
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCC-------CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCce
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKA-------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKC 317 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~ 317 (326)
.... ..++...++.+++++.+........ ...+.+++++++++.++. .+++.+++++++++++.+.++..
T Consensus 241 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~ 317 (325)
T TIGR02824 241 GGRK-AELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP--VIDKVFPLEDAAQAHALMESGDH 317 (325)
T ss_pred CCCc-CCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC--ccccEEeHHHHHHHHHHHHhCCC
Confidence 3222 2455555557899998886443211 112455778888886653 35688999999999999988766
Q ss_pred e-EEEEE
Q 020435 318 L-RCVIW 323 (326)
Q Consensus 318 ~-k~vv~ 323 (326)
. |++++
T Consensus 318 ~~~~v~~ 324 (325)
T TIGR02824 318 IGKIVLT 324 (325)
T ss_pred cceEEEe
Confidence 5 88875
No 112
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.96 E-value=5.2e-27 Score=212.75 Aligned_cols=264 Identities=25% Similarity=0.322 Sum_probs=211.8
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|++++++++||+|+..+. .+....|
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-------------------------~~~~~~g------------- 97 (328)
T cd08268 56 PLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPA-------------------------ADLGQYG------------- 97 (328)
T ss_pred CCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccc-------------------------cccCCCc-------------
Confidence 45889999999999999999999999999976432 1111223
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
++++|+.++.+.++++|+++++++++.+.+.+.+||+++.+...+.++++|+|+|+ |.+|++++++++..|+
T Consensus 98 ------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~- 170 (328)
T cd08268 98 ------TYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA- 170 (328)
T ss_pred ------cceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-
Confidence 89999999999999999999999999999999999998878888999999999987 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+++.++.++++.+.++++|.+.+++.+. .++.+.+.+.+.+ ++|++++|.++.. ...++++++++ |+++.++..
T Consensus 171 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~~ 245 (328)
T cd08268 171 TVIATTRTSEKRDALLALGAAHVIVTDE---EDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADALAPG-GTLVVYGAL 245 (328)
T ss_pred EEEEEcCCHHHHHHHHHcCCCEEEecCC---ccHHHHHHHHhCCCCceEEEECCchHh-HHHHHHhhccC-CEEEEEEeC
Confidence 8999999999999888899888888776 6777778877776 8999999999965 88899999998 999999864
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCC-CCCC----HHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLK-AKSD----IPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~----~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
.. ....++....+.++.++.+....... ..++ ++.+.+++.++.+.. .....|++++++++++.+..++..
T Consensus 246 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (328)
T cd08268 246 SG-EPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQIG 322 (328)
T ss_pred CC-CCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCCCc
Confidence 32 22334444346678888776543211 1122 344455666775543 355889999999999999887665
Q ss_pred EEEEE
Q 020435 319 RCVIW 323 (326)
Q Consensus 319 k~vv~ 323 (326)
|++++
T Consensus 323 ~vv~~ 327 (328)
T cd08268 323 KIVVT 327 (328)
T ss_pred eEEEe
Confidence 88875
No 113
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.96 E-value=4.2e-27 Score=209.21 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=205.1
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 87 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 87 (326)
.|.++|||++|+|+.+|++++.+++||+|+... .
T Consensus 23 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-------------------------------~--------------- 56 (288)
T smart00829 23 GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-------------------------------P--------------- 56 (288)
T ss_pred CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-------------------------------C---------------
Confidence 367999999999999999999999999997531 1
Q ss_pred ccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 020435 88 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 166 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~ 166 (326)
|+|++|+.++.+.++++|+++++++++.+.+.+.|+|.++.+...+.++++|+|+|+ |.+|++++++++..|+ +
T Consensus 57 ----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~-~ 131 (288)
T smart00829 57 ----GSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGA-E 131 (288)
T ss_pred ----CceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-E
Confidence 389999999999999999999999999999999999998778888999999999985 9999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCC--cEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 167 IIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
|+++++++++.+.++++|+ +++++..+ .++.+.+.+..++ ++|.++|+.++.. ....+++++++ |+++.++.
T Consensus 132 v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g~ 206 (288)
T smart00829 132 VFATAGSPEKRDFLRELGIPDDHIFSSRD---LSFADEILRATGGRGVDVVLNSLAGEF-LDASLRCLAPG-GRFVEIGK 206 (288)
T ss_pred EEEEeCCHHHHHHHHHcCCChhheeeCCC---ccHHHHHHHHhCCCCcEEEEeCCCHHH-HHHHHHhccCC-cEEEEEcC
Confidence 9999999999999999998 78888766 6777888888777 9999999999654 88899999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccCCC-----CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGGLK-----AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
........++... +.++.++.+....... ..+.+..++++++++.+++. ..+.|++++++++++.+..+...
T Consensus 207 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 283 (288)
T smart00829 207 RDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGKHI 283 (288)
T ss_pred cCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCCCc
Confidence 4321122233322 3345555554321100 01236678888888876643 44789999999999999887654
Q ss_pred -EEE
Q 020435 319 -RCV 321 (326)
Q Consensus 319 -k~v 321 (326)
|++
T Consensus 284 ~~iv 287 (288)
T smart00829 284 GKVV 287 (288)
T ss_pred ceEe
Confidence 665
No 114
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.96 E-value=3e-27 Score=217.10 Aligned_cols=258 Identities=21% Similarity=0.267 Sum_probs=196.8
Q ss_pred CCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccc
Q 020435 6 AVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETI 85 (326)
Q Consensus 6 ~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~ 85 (326)
..+|.++|||++|+|+.+|++++++++||+|++.+. ....
T Consensus 71 ~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~---------------------------~~~~------------- 110 (350)
T cd08248 71 IEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVP---------------------------PWSQ------------- 110 (350)
T ss_pred CCCCeeecceeEEEEEecCCCcccCCCCCEEEEecC---------------------------CCCC-------------
Confidence 466899999999999999999999999999976421 0112
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCC----CCEEEEEcc-CHHHHHHHHHHH
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEV----GSTVVIFGL-GSIGLAVAEGAR 160 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~----~~~vlI~Ga-g~~G~~a~~la~ 160 (326)
|+|++|+.++++.++++|+++++++++.+++.+.|||+++.+...+.+ +++|+|+|+ |++|++++++|+
T Consensus 111 ------g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~ 184 (350)
T cd08248 111 ------GTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLK 184 (350)
T ss_pred ------ccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHH
Confidence 399999999999999999999999999999999999998777777654 999999986 999999999999
Q ss_pred HcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 161 LCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 161 ~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
++|+ +|+++.++ ++.+.++++|.+++++..+ .++.+.+... +++|++|||.+... ...++++++++ |+++.
T Consensus 185 ~~G~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~~~l~~~--~~vd~vi~~~g~~~-~~~~~~~l~~~-G~~v~ 255 (350)
T cd08248 185 AWGA-HVTTTCST-DAIPLVKSLGADDVIDYNN---EDFEEELTER--GKFDVILDTVGGDT-EKWALKLLKKG-GTYVT 255 (350)
T ss_pred HCCC-eEEEEeCc-chHHHHHHhCCceEEECCC---hhHHHHHHhc--CCCCEEEECCChHH-HHHHHHHhccC-CEEEE
Confidence 9999 88888754 6777888899988888766 5555554432 38999999999885 89999999998 99999
Q ss_pred eccCCCCCcc--cc-----c-HHHHHhcC-------CEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccH
Q 020435 241 LGVDQPGSQL--SL-----S-SFEVLHSG-------KILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEI 305 (326)
Q Consensus 241 ~g~~~~~~~~--~~-----~-~~~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i 305 (326)
++........ .. . ...+.... ..+.... . ....+.+..+++++.++.+.+ .+++.|+++++
T Consensus 256 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~ 331 (350)
T cd08248 256 LVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGF-F-SPSGSALDELAKLVEDGKIKP--VIDKVFPFEEV 331 (350)
T ss_pred ecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEE-E-CCCHHHHHHHHHHHhCCCEec--ccceeecHHHH
Confidence 9854211110 01 0 00111101 0000000 0 111346888999999997654 36688999999
Q ss_pred HHHHHHHHcCcee-EEEE
Q 020435 306 NSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 306 ~~a~~~~~~~~~~-k~vv 322 (326)
.++++.+.+++.. |+++
T Consensus 332 ~~a~~~~~~~~~~~~vv~ 349 (350)
T cd08248 332 PEAYEKVESGHARGKTVI 349 (350)
T ss_pred HHHHHHHhcCCCceEEEe
Confidence 9999999887655 7775
No 115
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.6e-26 Score=209.73 Aligned_cols=260 Identities=25% Similarity=0.339 Sum_probs=202.3
Q ss_pred CCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCccccc
Q 020435 8 FPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHH 87 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~ 87 (326)
+|.++|||++|+|+.+|++++.+++||+|++.+. +...|
T Consensus 56 ~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~---------------------------~~~~~-------------- 94 (325)
T cd08271 56 YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHAS---------------------------LARGG-------------- 94 (325)
T ss_pred CCcccccceEEEEEEeCCCCCcCCCCCEEEeccC---------------------------CCCCc--------------
Confidence 4789999999999999999999999999976421 11223
Q ss_pred ccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCE
Q 020435 88 FVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATR 166 (326)
Q Consensus 88 ~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~ 166 (326)
+|++|+.++.+.++++|+++++.+++.+.+.+.+|++++.+.+++.++++|+|+|+ |.+|++++++++..|+ .
T Consensus 95 -----~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~ 168 (325)
T cd08271 95 -----SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-R 168 (325)
T ss_pred -----cceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-E
Confidence 89999999999999999999999999999999999998878889999999999997 8999999999999999 8
Q ss_pred EEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 167 IIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 167 V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+.+. ++++.+.++.+|++.+++... .++.+.+++...+ ++|++++|.++.. ....+++++++ |+++.++...
T Consensus 169 v~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-G~~v~~~~~~ 242 (325)
T cd08271 169 VITTC-SKRNFEYVKSLGADHVIDYND---EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN-GHLVCIQGRP 242 (325)
T ss_pred EEEEE-cHHHHHHHHHcCCcEEecCCC---ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC-CEEEEEcCCC
Confidence 88877 677788888899988988776 6777788888776 9999999999877 67789999998 9999987532
Q ss_pred CCCcccccHH--HHHhcCCEEEeeeccCC-----CCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 246 PGSQLSLSSF--EVLHSGKILMGSLFGGL-----KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 246 ~~~~~~~~~~--~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
... ..... .+..+++.+........ ...+.+..++++++++.+.+. ..+.|+++++.++++.+.++...
T Consensus 243 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~~~ 318 (325)
T cd08271 243 DAS--PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPL--VIEVLPFEQLPEALRALKDRHTR 318 (325)
T ss_pred CCc--chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeec--cceEEcHHHHHHHHHHHHcCCcc
Confidence 211 11110 11112222222211110 011235678889989876543 45889999999999999887665
Q ss_pred -EEEEEe
Q 020435 319 -RCVIWM 324 (326)
Q Consensus 319 -k~vv~~ 324 (326)
|+++++
T Consensus 319 ~kiv~~~ 325 (325)
T cd08271 319 GKIVVTI 325 (325)
T ss_pred ceEEEEC
Confidence 888763
No 116
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.95 E-value=1.9e-26 Score=205.23 Aligned_cols=256 Identities=22% Similarity=0.255 Sum_probs=206.2
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+++|++++.+++||+|.... .
T Consensus 26 ~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------------------~-------------- 60 (293)
T cd05195 26 GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------------------P-------------- 60 (293)
T ss_pred CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------------------c--------------
Confidence 3588999999999999999999999999997531 1
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|+|++|+.++.+.++++|+++++++++.+.+++.|||.++.+...++++++|+|+|+ |.+|++++++++..|+
T Consensus 61 -----g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~- 134 (293)
T cd05195 61 -----GAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA- 134 (293)
T ss_pred -----CcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999998999999998878888999999999975 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcC--CcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 166 RIIGVDVISEKFEIGKRFG--VTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g--~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+|++++.++++.+.+++.+ ++++++..+ .++.+.+++.+.+ ++|+++||.++.. ....+++++++ |+++.++
T Consensus 135 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~-g~~v~~g 209 (293)
T cd05195 135 EVFATVGSEEKREFLRELGGPVDHIFSSRD---LSFADGILRATGGRGVDVVLNSLSGEL-LRASWRCLAPF-GRFVEIG 209 (293)
T ss_pred EEEEEeCCHHHHHHHHHhCCCcceEeecCc---hhHHHHHHHHhCCCCceEEEeCCCchH-HHHHHHhcccC-ceEEEee
Confidence 8999998989999888887 778888766 6788888888877 9999999999985 99999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCC------CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCc
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLK------AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGK 316 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~ 316 (326)
.........+.... +.++..+......... ..+.+..+++++.++.+. +..+..+++++++++++.+..++
T Consensus 210 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~ 286 (293)
T cd05195 210 KRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGK 286 (293)
T ss_pred ccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCC
Confidence 64322112233222 2234555443222110 012467788899899764 34567899999999999998876
Q ss_pred ee-EEE
Q 020435 317 CL-RCV 321 (326)
Q Consensus 317 ~~-k~v 321 (326)
.. |++
T Consensus 287 ~~~~iv 292 (293)
T cd05195 287 HIGKVV 292 (293)
T ss_pred CCceec
Confidence 65 665
No 117
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.9e-26 Score=209.06 Aligned_cols=258 Identities=23% Similarity=0.280 Sum_probs=208.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCC-CCCCCccccccCCccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWM-PRDQTSRFKDLRGETI 85 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~ 85 (326)
..|.++|||++|+|+.+|++++++++||+|+.... ++ ...
T Consensus 56 ~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~--------------------------~~~~~~------------- 96 (326)
T cd08272 56 PLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAG--------------------------GLGGLQ------------- 96 (326)
T ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEEEccC--------------------------CcCCCC-------------
Confidence 45889999999999999999999999999975321 10 012
Q ss_pred ccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCC
Q 020435 86 HHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGA 164 (326)
Q Consensus 86 ~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~ 164 (326)
|++++|+.++.+.++++|+++++++++.+++.+.+||+++.+..++.++++++|+|+ |.+|++++++++..|+
T Consensus 97 ------g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~ 170 (326)
T cd08272 97 ------GSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA 170 (326)
T ss_pred ------CceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC
Confidence 389999999999999999999999999999999999998888899999999999986 9999999999999999
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+.++++ ++.+.++++|.+.+++... . +.+.+++.+.+ ++|+++||.++.. ....+++++++ |+++.++.
T Consensus 171 -~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~-~~~~~~~~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~~~ 242 (326)
T cd08272 171 -RVYATASS-EKAAFARSLGADPIIYYRE---T-VVEYVAEHTGGRGFDVVFDTVGGET-LDASFEAVALY-GRVVSILG 242 (326)
T ss_pred -EEEEEech-HHHHHHHHcCCCEEEecch---h-HHHHHHHhcCCCCCcEEEECCChHH-HHHHHHHhccC-CEEEEEec
Confidence 89999988 8888888899988888766 5 77788888877 9999999999876 88899999998 99999986
Q ss_pred CCCCCcccccHHHHHhcCCEEEeeeccC--C--C----CCCCHHHHHHHHhCCCCCCCccee-eeeccccHHHHHHHHHc
Q 020435 244 DQPGSQLSLSSFEVLHSGKILMGSLFGG--L--K----AKSDIPILLKRYMDKELELDKFVT-HEMKFEEINSAFDLLIK 314 (326)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~--~----~~~~~~~~~~l~~~g~~~~~~~i~-~~~~l~~i~~a~~~~~~ 314 (326)
.. ...+. ....+++++.+..... . . ..+.+..++++++++.++. .++ +.|++++++++++.+.+
T Consensus 243 ~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~ 315 (326)
T cd08272 243 GA---THDLA--PLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLES 315 (326)
T ss_pred CC---ccchh--hHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHc
Confidence 42 12222 2235577776654221 1 0 1234677888888886653 334 88999999999999988
Q ss_pred Ccee-EEEEEe
Q 020435 315 GKCL-RCVIWM 324 (326)
Q Consensus 315 ~~~~-k~vv~~ 324 (326)
++.. |+++++
T Consensus 316 ~~~~~~vv~~~ 326 (326)
T cd08272 316 GSARGKIVIDV 326 (326)
T ss_pred CCcccEEEEEC
Confidence 7655 888764
No 118
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.95 E-value=3.1e-26 Score=210.73 Aligned_cols=263 Identities=18% Similarity=0.192 Sum_probs=193.7
Q ss_pred CCcccCCceeEEEEEecCCCC-CccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 8 FPRILGHEAIGVVESVGENVD-GVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 8 ~p~i~G~e~~G~V~~~G~~v~-~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.|.++|||++|+|+++|++++ .|++||+|++.....| ...
T Consensus 58 ~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~-------------------------~~~-------------- 98 (352)
T cd08247 58 KEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPY-------------------------GGQ-------------- 98 (352)
T ss_pred CCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCC-------------------------CCC--------------
Confidence 478999999999999999998 8999999976432110 012
Q ss_pred cccccccccceEEeccc----ceEEcCCCCCccccccccchhhhhhhhhhhhc-ccCCCCEEEEEcc-CHHHHHHHHHHH
Q 020435 87 HFVSVSSFSEYTVLDIA----HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTA-NVEVGSTVVIFGL-GSIGLAVAEGAR 160 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~----~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~-~~~~~~~vlI~Ga-g~~G~~a~~la~ 160 (326)
|+|++|++++.. .++++|+++++++++.+++.+.|||+++.+.. ++++|++|+|+|+ |++|++++++|+
T Consensus 99 -----g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~ 173 (352)
T cd08247 99 -----GTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAK 173 (352)
T ss_pred -----ceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHH
Confidence 499999999987 79999999999999999999999999876666 7999999999987 799999999999
Q ss_pred HcC-CCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCcc---HHHHHHHh-cCC-CccEEEEcCCcHHHHHHHHHHhh--
Q 020435 161 LCG-ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKS---VSQIIIDM-TDG-GADYCFECVGLASLVQEAYACCR-- 232 (326)
Q Consensus 161 ~~g-~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~---~~~~i~~~-~~~-g~d~v~d~~g~~~~~~~~~~~l~-- 232 (326)
..| ..+++.+. ++++.+.++++|++++++.++ .+ +...+.+. +++ ++|++|||.++......++++++
T Consensus 174 ~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~ 249 (352)
T cd08247 174 NHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDA---HSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPK 249 (352)
T ss_pred hcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCC---CcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCcc
Confidence 874 32566665 556666778899999998766 34 44444444 424 99999999998655889999999
Q ss_pred -cCCcEEEEeccCCCCC--ccc--------ccHHHHH----hcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCccee
Q 020435 233 -KGWGKTIVLGVDQPGS--QLS--------LSSFEVL----HSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVT 297 (326)
Q Consensus 233 -~~~G~~v~~g~~~~~~--~~~--------~~~~~~~----~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~ 297 (326)
++ |+++.++...... ... .....+. .+...+.... . ....+.++.+++++.++.+.+ .++
T Consensus 250 ~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~--~~~ 324 (352)
T cd08247 250 SKN-GHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFL-L-DPNADWIEKCAELIADGKVKP--PID 324 (352)
T ss_pred CCC-CEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEE-e-cCCHHHHHHHHHHHhCCCeEe--eec
Confidence 98 9999875321110 000 0011111 1122222111 0 011235778899999996643 366
Q ss_pred eeeccccHHHHHHHHHcCcee-EEEEE
Q 020435 298 HEMKFEEINSAFDLLIKGKCL-RCVIW 323 (326)
Q Consensus 298 ~~~~l~~i~~a~~~~~~~~~~-k~vv~ 323 (326)
+.++++++++|++.+.+++.. |++++
T Consensus 325 ~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 325 SVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred cEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 889999999999999887765 88875
No 119
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.95 E-value=8.9e-26 Score=205.14 Aligned_cols=261 Identities=16% Similarity=0.178 Sum_probs=200.7
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|++ ++++++++||+|++.... ++....|
T Consensus 56 ~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~------------------------~~~~~~g------------- 96 (324)
T cd08288 56 TFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWG------------------------VGERHWG------------- 96 (324)
T ss_pred CCCCccccceEEEEEe--CCCCCCCCCCEEEECCcc------------------------CCCCCCC-------------
Confidence 4688999999999999 777889999999763110 1111123
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhh--hhcccC-CCCEEEEEcc-CHHHHHHHHHHHHc
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAW--RTANVE-VGSTVVIFGL-GSIGLAVAEGARLC 162 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~--~~~~~~-~~~~vlI~Ga-g~~G~~a~~la~~~ 162 (326)
+|++|++++.+.++++|+++++++++.+++.+++|+.++. +..+.. ++++|||+|+ |++|++++|+|+++
T Consensus 97 ------~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~ 170 (324)
T cd08288 97 ------GYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARL 170 (324)
T ss_pred ------cceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHC
Confidence 8999999999999999999999999999999999987643 224445 5789999997 99999999999999
Q ss_pred CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 163 GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 163 g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+ +|++++.++++.+.++++|+++++++.+ .+ ..++.++.+++|.++|++++.. ....+..++.+ |+++.+|
T Consensus 171 G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~---~~--~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~-g~~~~~G 242 (324)
T cd08288 171 GY-EVVASTGRPEEADYLRSLGASEIIDRAE---LS--EPGRPLQKERWAGAVDTVGGHT-LANVLAQTRYG-GAVAACG 242 (324)
T ss_pred CC-eEEEEeCCHHHHHHHHhcCCCEEEEcch---hh--HhhhhhccCcccEEEECCcHHH-HHHHHHHhcCC-CEEEEEE
Confidence 99 8999999999999999999999998765 22 2455555557999999999855 77888899997 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCC---CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKA---KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL- 318 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~- 318 (326)
.... ....++...++.++.++.+........ .+.+..+++++.++.+.+ +.+.++++++++|++.+.+++..
T Consensus 243 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~~ 318 (324)
T cd08288 243 LAGG-ADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQVRG 318 (324)
T ss_pred ecCC-CCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCccC
Confidence 7522 223344445546788888875332211 123556677777886543 35899999999999999988776
Q ss_pred EEEEEe
Q 020435 319 RCVIWM 324 (326)
Q Consensus 319 k~vv~~ 324 (326)
|+++++
T Consensus 319 ~vvv~~ 324 (324)
T cd08288 319 RVVVDV 324 (324)
T ss_pred eEEEeC
Confidence 888763
No 120
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=2.1e-26 Score=209.81 Aligned_cols=255 Identities=26% Similarity=0.333 Sum_probs=196.1
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|+++++|++||+|.... ..
T Consensus 56 ~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~------------------------------~~-------------- 91 (331)
T cd08273 56 PLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT------------------------------RV-------------- 91 (331)
T ss_pred CCCcccccceEEEEEEeCCCCccCCCCCEEEEeC------------------------------CC--------------
Confidence 4688999999999999999999999999996531 11
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|+|++|+.++.+.++++|+++++++++.+++++.+||+++.+..++.++++|+|+|+ |++|++++++|+..|+
T Consensus 92 -----g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~- 165 (331)
T cd08273 92 -----GGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA- 165 (331)
T ss_pred -----cceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998877788999999999997 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+|+.++. +++.+.++++|+.. ++... .++.+. ...++++|+++||.++.. ...++++++++ |+++.+|...
T Consensus 166 ~v~~~~~-~~~~~~~~~~g~~~-~~~~~---~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~-g~~v~~g~~~ 236 (331)
T cd08273 166 EVYGTAS-ERNHAALRELGATP-IDYRT---KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG-GTLVCYGGNS 236 (331)
T ss_pred EEEEEeC-HHHHHHHHHcCCeE-EcCCC---cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC-CEEEEEccCC
Confidence 8999987 88888888899754 44443 344433 333348999999999988 88999999998 9999998653
Q ss_pred CCCccccc--HH----------HH--HhcCCEEEeeeccCC----CCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHH
Q 020435 246 PGSQLSLS--SF----------EV--LHSGKILMGSLFGGL----KAKSDIPILLKRYMDKELELDKFVTHEMKFEEINS 307 (326)
Q Consensus 246 ~~~~~~~~--~~----------~~--~~~~~~i~~~~~~~~----~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~ 307 (326)
........ .. .. +.+............ ...+.+++++++++++.+.. .+.+.++++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~ 314 (331)
T cd08273 237 SLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAE 314 (331)
T ss_pred CCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHH
Confidence 22221111 10 01 111222222211000 01245788999999997653 3668899999999
Q ss_pred HHHHHHcCcee-EEEE
Q 020435 308 AFDLLIKGKCL-RCVI 322 (326)
Q Consensus 308 a~~~~~~~~~~-k~vv 322 (326)
+++.+.+++.. |+++
T Consensus 315 a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 315 AHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHcCCCcceEEe
Confidence 99999877665 7764
No 121
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.95 E-value=2e-27 Score=229.94 Aligned_cols=226 Identities=18% Similarity=0.201 Sum_probs=195.6
Q ss_pred cccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEc-cCHHHHHHHHHHHHcCCCEEEEEc
Q 020435 93 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD 171 (326)
Q Consensus 93 ~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~G-ag~~G~~a~~la~~~g~~~V~~~~ 171 (326)
++++-+.++.++++.+|++...++|++.++.++|||++++.+...++|++||||+ +|++|++++.+|.+.|+ +||.++
T Consensus 1506 sLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTV 1584 (2376)
T KOG1202|consen 1506 SLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTV 1584 (2376)
T ss_pred hhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEec
Confidence 8999999999999999999999999999999999999999999999999999995 69999999999999999 999999
Q ss_pred CChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCCC
Q 020435 172 VISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 172 ~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
.|+|+.+++.+ +..+++-|..+ .+|..-+++-|.| |+|+|++...++. ++.+++||..+ |+|..+|.-+-
T Consensus 1585 GSaEKRefL~~rFPqLqe~~~~NSRd---tsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GRFLEIGKfDL 1659 (2376)
T KOG1202|consen 1585 GSAEKREFLLKRFPQLQETNFANSRD---TSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GRFLEIGKFDL 1659 (2376)
T ss_pred CcHHHHHHHHHhchhhhhhccccccc---ccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-Ceeeeecceec
Confidence 99999998764 34677778777 8899999999999 9999999999988 99999999998 99999996544
Q ss_pred CCcccccHHHHHhcCCEEEeeeccCCCC--CCCHHHHHHHHhCCCCC--CCcceeeeeccccHHHHHHHHHcCcee-EEE
Q 020435 247 GSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELE--LDKFVTHEMKFEEINSAFDLLIKGKCL-RCV 321 (326)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~l~~~g~~~--~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~v 321 (326)
+...++.+. .+.||.+++|....+... .+++.++..++++|.-+ .+++.+++|+-.++++||+.|.+++.+ |+|
T Consensus 1660 SqNspLGMa-vfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVv 1738 (2376)
T KOG1202|consen 1660 SQNSPLGMA-VFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVV 1738 (2376)
T ss_pred ccCCcchhh-hhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccCccceEE
Confidence 445555544 345799999987655432 23567778888887432 557788999999999999999999998 999
Q ss_pred EEeC
Q 020435 322 IWMG 325 (326)
Q Consensus 322 v~~~ 325 (326)
+++.
T Consensus 1739 ikvr 1742 (2376)
T KOG1202|consen 1739 IKVR 1742 (2376)
T ss_pred EEEc
Confidence 9863
No 122
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.95 E-value=1.1e-25 Score=203.54 Aligned_cols=258 Identities=24% Similarity=0.394 Sum_probs=211.6
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
..|.++|||++|+|+.+|++++.+++||+|+... ..
T Consensus 56 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~------------------------------~~-------------- 91 (323)
T cd08241 56 PLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT------------------------------GQ-------------- 91 (323)
T ss_pred CCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec------------------------------CC--------------
Confidence 3477899999999999999999999999997532 11
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|++++|+.++.+.++++|++++..+++.+.+.+.+||+++.+..++.++++|+|+|+ |.+|++++++++..|+
T Consensus 92 -----~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~- 165 (323)
T cd08241 92 -----GGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA- 165 (323)
T ss_pred -----ceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-
Confidence 389999999999999999999999998888899999998777788999999999997 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+|+.++.++++.+.++++|++.+++... .++.+.+.+.+.+ ++|.++||.++.. ...++++++++ |+++.++..
T Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~i~~~~~~~~~d~v~~~~g~~~-~~~~~~~~~~~-g~~v~~~~~ 240 (323)
T cd08241 166 RVIAAASSEEKLALARALGADHVIDYRD---PDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSLAWG-GRLLVIGFA 240 (323)
T ss_pred EEEEEeCCHHHHHHHHHcCCceeeecCC---ccHHHHHHHHcCCCCcEEEEECccHHH-HHHHHHhhccC-CEEEEEccC
Confidence 8999999999999998899888888776 6788888888877 9999999999855 88899999998 999999864
Q ss_pred CCCCcccccHHHHHhcCCEEEeeeccCCCC------CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee
Q 020435 245 QPGSQLSLSSFEVLHSGKILMGSLFGGLKA------KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL 318 (326)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~ 318 (326)
... ...+.....+.++.++.+........ .+.+.++++++.++.+.. ..++.|+++++.++++.+.++...
T Consensus 241 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 317 (323)
T cd08241 241 SGE-IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRP--HVSAVFPLEQAAEALRALADRKAT 317 (323)
T ss_pred CCC-cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCccc--ccceEEcHHHHHHHHHHHHhCCCC
Confidence 221 11133333455788888875443221 134677889999987643 366889999999999998877655
Q ss_pred -EEEE
Q 020435 319 -RCVI 322 (326)
Q Consensus 319 -k~vv 322 (326)
|+++
T Consensus 318 ~~vvv 322 (323)
T cd08241 318 GKVVL 322 (323)
T ss_pred CcEEe
Confidence 7775
No 123
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.9e-25 Score=203.59 Aligned_cols=260 Identities=21% Similarity=0.327 Sum_probs=206.0
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
.+|.++|||++|+|+.+|++++++++||+|+... ..|
T Consensus 55 ~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~------------------------------~~~------------- 91 (337)
T cd08275 55 KPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT------------------------------RFG------------- 91 (337)
T ss_pred CCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec------------------------------CCC-------------
Confidence 5688999999999999999999999999997531 122
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHc-CC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLC-GA 164 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~-g~ 164 (326)
++++|+.++.+.++++|+++++++++.+++.+.+||+++.+..+++++++|+|+|+ |++|++++++|+.. +.
T Consensus 92 ------~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~ 165 (337)
T cd08275 92 ------GYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV 165 (337)
T ss_pred ------eeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc
Confidence 89999999999999999999999999999999999998888889999999999997 99999999999998 43
Q ss_pred CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 165 TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 165 ~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.++... .+++.+.++.+|++.+++... .++.+.+++.+++++|+++||.++.. ...++++++++ |+++.+|..
T Consensus 166 -~~~~~~-~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~d~v~~~~g~~~-~~~~~~~l~~~-g~~v~~g~~ 238 (337)
T cd08275 166 -TVVGTA-SASKHEALKENGVTHVIDYRT---QDYVEEVKKISPEGVDIVLDALGGED-TRKSYDLLKPM-GRLVVYGAA 238 (337)
T ss_pred -EEEEeC-CHHHHHHHHHcCCcEEeeCCC---CcHHHHHHHHhCCCceEEEECCcHHH-HHHHHHhhccC-cEEEEEeec
Confidence 333222 345777888899988888776 67878888777559999999999876 88999999998 999999864
Q ss_pred CCCCc---------------ccccHHHHHhcCCEEEeeeccCCCC-C----CCHHHHHHHHhCCCCCCCcceeeeecccc
Q 020435 245 QPGSQ---------------LSLSSFEVLHSGKILMGSLFGGLKA-K----SDIPILLKRYMDKELELDKFVTHEMKFEE 304 (326)
Q Consensus 245 ~~~~~---------------~~~~~~~~~~~~~~i~~~~~~~~~~-~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~ 304 (326)
..... ..+....++.++.++.++....... . ..+.+++++++++.+.+. .++.|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 316 (337)
T cd08275 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKPK--IDSVFPFEE 316 (337)
T ss_pred CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCCc--eeeEEcHHH
Confidence 32111 1222234456788888775432211 1 136678888989876543 568899999
Q ss_pred HHHHHHHHHcCcee-EEEEEe
Q 020435 305 INSAFDLLIKGKCL-RCVIWM 324 (326)
Q Consensus 305 i~~a~~~~~~~~~~-k~vv~~ 324 (326)
++++++.+.+++.. |+++++
T Consensus 317 ~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 317 VGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHcCCCcceEEEeC
Confidence 99999999887665 888764
No 124
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.95 E-value=1.2e-25 Score=203.30 Aligned_cols=255 Identities=23% Similarity=0.278 Sum_probs=193.5
Q ss_pred CCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccc
Q 020435 7 VFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIH 86 (326)
Q Consensus 7 ~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~ 86 (326)
..|.++|||++|+|+++|++++++++||+|+..... ...
T Consensus 57 ~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------------------------~~~-------------- 95 (319)
T cd08267 57 PFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP---------------------------KGG-------------- 95 (319)
T ss_pred CCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC---------------------------CCC--------------
Confidence 457889999999999999999999999999764220 112
Q ss_pred cccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCC
Q 020435 87 HFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGAT 165 (326)
Q Consensus 87 ~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~ 165 (326)
|+|++|+.++.+.++++|+++++++++.+++.+.+||+++.+..+++++++|+|+|+ |++|++++++|+..|+
T Consensus 96 -----g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~- 169 (319)
T cd08267 96 -----GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA- 169 (319)
T ss_pred -----ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-
Confidence 389999999999999999999999999999999999998777777999999999997 9999999999999999
Q ss_pred EEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcH-HHHHHHHHHhhcCCcEEEEecc
Q 020435 166 RIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLA-SLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 166 ~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~-~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|++++++ ++.+.++++|.+++++... .++. +..+.+ ++|++++|.++. ......+..++++ |+++.+|.
T Consensus 170 ~v~~~~~~-~~~~~~~~~g~~~~~~~~~---~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~ 241 (319)
T cd08267 170 HVTGVCST-RNAELVRSLGADEVIDYTT---EDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGG 241 (319)
T ss_pred EEEEEeCH-HHHHHHHHcCCCEeecCCC---CCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEecc
Confidence 89998865 7888888899988887665 3433 344555 899999999853 2233444459998 99999986
Q ss_pred CCCCCcccc---cHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-E
Q 020435 244 DQPGSQLSL---SSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-R 319 (326)
Q Consensus 244 ~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k 319 (326)
......... ....... ...+...... ...+.+.+++++++++.++. .+++.|++++++++++.+.+++.. |
T Consensus 242 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~i~~a~~~~~~~~~~~~ 316 (319)
T cd08267 242 GPSGLLLVLLLLPLTLGGG-GRRLKFFLAK--PNAEDLEQLAELVEEGKLKP--VIDSVYPLEDAPEAYRRLKSGRARGK 316 (319)
T ss_pred ccccccccccccchhhccc-cceEEEEEec--CCHHHHHHHHHHHHCCCeee--eeeeEEcHHHHHHHHHHHhcCCCCCc
Confidence 432222111 1111111 1222222111 11456888999999987653 366899999999999999887655 6
Q ss_pred EE
Q 020435 320 CV 321 (326)
Q Consensus 320 ~v 321 (326)
++
T Consensus 317 vv 318 (319)
T cd08267 317 VV 318 (319)
T ss_pred Ee
Confidence 65
No 125
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.94 E-value=2.6e-25 Score=199.93 Aligned_cols=250 Identities=22% Similarity=0.312 Sum_probs=198.9
Q ss_pred CCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcc
Q 020435 5 PAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGET 84 (326)
Q Consensus 5 ~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~ 84 (326)
...+|.++|||++|+|+.+|++++.+++||+|+..+. ....|
T Consensus 56 ~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~---------------------------~~~~g----------- 97 (309)
T cd05289 56 PLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTP---------------------------FTRGG----------- 97 (309)
T ss_pred CCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccC---------------------------CCCCC-----------
Confidence 3456899999999999999999999999999976421 01123
Q ss_pred cccccccccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcC
Q 020435 85 IHHFVSVSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCG 163 (326)
Q Consensus 85 ~~~~~~~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g 163 (326)
++++|+.++...++++|++++++.++.+++.+.+||+++.+...+.++++|+|+|+ |.+|++++++++..|
T Consensus 98 --------~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g 169 (309)
T cd05289 98 --------AYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARG 169 (309)
T ss_pred --------cceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcC
Confidence 89999999999999999999999999999999999998777777999999999997 999999999999999
Q ss_pred CCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 164 ATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 164 ~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+ +|++++.++ +.+.++++|.+++++... .++.+ .+.+ ++|+++||.++.. ...++++++++ |+++.++
T Consensus 170 ~-~v~~~~~~~-~~~~~~~~g~~~~~~~~~---~~~~~----~~~~~~~d~v~~~~~~~~-~~~~~~~l~~~-g~~v~~g 238 (309)
T cd05289 170 A-RVIATASAA-NADFLRSLGADEVIDYTK---GDFER----AAAPGGVDAVLDTVGGET-LARSLALVKPG-GRLVSIA 238 (309)
T ss_pred C-EEEEEecch-hHHHHHHcCCCEEEeCCC---Cchhh----ccCCCCceEEEECCchHH-HHHHHHHHhcC-cEEEEEc
Confidence 9 888888776 778888899888887665 44433 3344 8999999999885 88999999998 9999998
Q ss_pred cCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEE
Q 020435 243 VDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCV 321 (326)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~v 321 (326)
..... .. ....++.++........ .+.+..++++++++.+. +.+++.|++++++++++.+..++.. |++
T Consensus 239 ~~~~~--~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kvv 308 (309)
T cd05289 239 GPPPA--EQ----AAKRRGVRAGFVFVEPD--GEQLAELAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHARGKVV 308 (309)
T ss_pred CCCcc--hh----hhhhccceEEEEEeccc--HHHHHHHHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCCCCcEe
Confidence 64321 11 22334555554432211 35688899999998654 3366899999999999999887654 665
No 126
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=99.93 E-value=2.8e-24 Score=183.22 Aligned_cols=250 Identities=20% Similarity=0.223 Sum_probs=201.3
Q ss_pred ceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccccccccccc
Q 020435 15 EAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVSVSSF 94 (326)
Q Consensus 15 e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~g~~ 94 (326)
.++|+|++. +.+.+++||.|+.. . +|
T Consensus 78 ~GV~kVi~S--~~~~~~~GD~v~g~------------------------------~----------------------gW 103 (343)
T KOG1196|consen 78 FGVAKVIDS--GHPNYKKGDLVWGI------------------------------V----------------------GW 103 (343)
T ss_pred CceEEEEec--CCCCCCcCceEEEe------------------------------c----------------------cc
Confidence 678999996 45789999999542 1 69
Q ss_pred cceEEeccc--ceEEcCC--CCCccccc-cccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEE
Q 020435 95 SEYTVLDIA--HVVKVDP--TVPPNRAC-LLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRII 168 (326)
Q Consensus 95 a~~~~v~~~--~~~~ip~--~~s~~~aa-~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~ 168 (326)
.||.+++.. ..+++|. ++++.-.. ++.++.+|||..+++...++.|++|+|-|| |++|+++.|+|+.+|+ +|+
T Consensus 104 eeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VV 182 (343)
T KOG1196|consen 104 EEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVV 182 (343)
T ss_pred eEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEE
Confidence 999999764 3455544 45544433 577899999999999999999999999987 9999999999999999 999
Q ss_pred EEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCCC-
Q 020435 169 GVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQP- 246 (326)
Q Consensus 169 ~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~- 246 (326)
+.+.++|+.+.++. +|.+..+|+.+ +.++.+.+++..++|+|+.||.+|+.. ++..+..++.. |+++.+|....
T Consensus 183 GsaGS~EKv~ll~~~~G~d~afNYK~--e~~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~-gri~~CG~ISqY 258 (343)
T KOG1196|consen 183 GSAGSKEKVDLLKTKFGFDDAFNYKE--ESDLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH-GRIAVCGMISQY 258 (343)
T ss_pred EecCChhhhhhhHhccCCccceeccC--ccCHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc-cceEeeeeehhc
Confidence 99999999998765 79999999998 237888888888889999999999999 99999999996 99999997541
Q ss_pred ---CCcccccHHHHHhcCCEEEeeeccCCCC--CCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EE
Q 020435 247 ---GSQLSLSSFEVLHSGKILMGSLFGGLKA--KSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RC 320 (326)
Q Consensus 247 ---~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~ 320 (326)
..+.--+...++.|++.+.|+.+.++.. .+.+..+..++++|+|++.+-+ .-.+++.+.|+.-+..+++. |.
T Consensus 259 N~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi--~~Glen~P~A~vglf~GkNvGKq 336 (343)
T KOG1196|consen 259 NLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDI--ADGLENGPSALVGLFHGKNVGKQ 336 (343)
T ss_pred cccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhH--HHHHhccHHHHHHHhccCcccce
Confidence 1122223345677899999986655431 2346778899999999877443 23599999999999999987 99
Q ss_pred EEEeC
Q 020435 321 VIWMG 325 (326)
Q Consensus 321 vv~~~ 325 (326)
++.+.
T Consensus 337 iv~va 341 (343)
T KOG1196|consen 337 LVKVA 341 (343)
T ss_pred EEEee
Confidence 88875
No 127
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.78 E-value=3.9e-18 Score=134.18 Aligned_cols=129 Identities=28% Similarity=0.490 Sum_probs=117.5
Q ss_pred HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHH
Q 020435 150 SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAY 228 (326)
Q Consensus 150 ~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~ 228 (326)
++|++++|+||+.|+ +|+++++++++++.++++|+++++++++ .++.+.+++.+++ ++|+||||+|.+..++.++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~---~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~ 76 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD---DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAI 76 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT---SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc---cccccccccccccccceEEEEecCcHHHHHHHH
Confidence 589999999999997 9999999999999999999999999998 8899999999998 9999999999777799999
Q ss_pred HHhhcCCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHHHHHhC
Q 020435 229 ACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILLKRYMD 287 (326)
Q Consensus 229 ~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~ 287 (326)
++++++ |+++.+|... ....+++...++.+++++.+++.++ +++++++++++.+
T Consensus 77 ~~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~ 130 (130)
T PF00107_consen 77 KLLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ 130 (130)
T ss_dssp HHEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred HHhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence 999998 9999999864 5788899999999999999997655 4788999888753
No 128
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.70 E-value=1.6e-17 Score=126.60 Aligned_cols=84 Identities=38% Similarity=0.578 Sum_probs=75.9
Q ss_pred CCCCCCCcccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCC
Q 020435 3 DFPAVFPRILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRG 82 (326)
Q Consensus 3 ~~~~~~p~i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 82 (326)
.+...+|+|+|||++|+|+++|+++++|++||+|++.+...|+.|.+|+.+++++|..... +|+..+|
T Consensus 26 ~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~c~~~~~---~g~~~~G--------- 93 (109)
T PF08240_consen 26 PPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNLCPNPEV---LGLGLDG--------- 93 (109)
T ss_dssp SSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGGTTTBEE---TTTSSTC---------
T ss_pred ccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCccccCCCCCE---eEcCCCC---------
Confidence 4567899999999999999999999999999999999999999999999999999988776 7777778
Q ss_pred cccccccccccccceEEecccceEEc
Q 020435 83 ETIHHFVSVSSFSEYTVLDIAHVVKV 108 (326)
Q Consensus 83 ~~~~~~~~~g~~a~~~~v~~~~~~~i 108 (326)
+||||+.+++++++|+
T Consensus 94 ----------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 94 ----------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp ----------SSBSEEEEEGGGEEEE
T ss_pred ----------cccCeEEEehHHEEEC
Confidence 9999999999999985
No 129
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.48 E-value=5.8e-13 Score=122.93 Aligned_cols=176 Identities=14% Similarity=0.163 Sum_probs=138.4
Q ss_pred hhhhhhhcc-cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHh
Q 020435 128 VGAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 128 ~~~l~~~~~-~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 206 (326)
|.++.+..+ .-+|++|+|.|+|.+|+.+++.++.+|+ +|++++.++.+.+.++.+|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v--- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T--------MEEAV--- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c--------HHHHH---
Confidence 344444444 3579999999999999999999999999 89999999999999999998433 1 11222
Q ss_pred cCCCccEEEEcCCcHHHHHHH-HHHhhcCCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHH--HHHH
Q 020435 207 TDGGADYCFECVGLASLVQEA-YACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIP--ILLK 283 (326)
Q Consensus 207 ~~~g~d~v~d~~g~~~~~~~~-~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~ 283 (326)
.++|+||+|.|....+... +..++++ |.++.+|.. ...++...+..+++++.+++.... ..++. +.+.
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~----~~eId~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~ 326 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF----DVEIDVKGLKENAVEVVNIKPQVD--RYELPDGRRII 326 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC----CCccCHHHHHhhccEEEEccCCcc--eEEcCCcchhh
Confidence 2689999999998877765 9999998 999999853 456787778888899988863321 12455 7999
Q ss_pred HHhCCCC-CCCcceeee-----eccc-cHHHHHHHHHcCce--eEEEEEeC
Q 020435 284 RYMDKEL-ELDKFVTHE-----MKFE-EINSAFDLLIKGKC--LRCVIWMG 325 (326)
Q Consensus 284 l~~~g~~-~~~~~i~~~-----~~l~-~i~~a~~~~~~~~~--~k~vv~~~ 325 (326)
++.+|++ ++...++|. ++++ ++.++++.+.++.. .|+++.+.
T Consensus 327 LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 327 LLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred hhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 9999998 888888888 8899 99999999987654 37777653
No 130
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.35 E-value=1.5e-11 Score=116.37 Aligned_cols=155 Identities=19% Similarity=0.248 Sum_probs=114.3
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCCC----------CCccHHHHHHH
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNC----------GDKSVSQIIID 205 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~~----------~~~~~~~~i~~ 205 (326)
..++++|+|+|+|.+|+++++.|+.+|+ +|++++.++++++.++++|++.+ ++..+. ...++.+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4579999999999999999999999999 89999999999999999999854 554330 01133333333
Q ss_pred h-cC--CCccEEEEcCCcH-----HH-HHHHHHHhhcCCcEEEEeccCCCCC-cccccHHHHHh-cCCEEEeeeccCCCC
Q 020435 206 M-TD--GGADYCFECVGLA-----SL-VQEAYACCRKGWGKTIVLGVDQPGS-QLSLSSFEVLH-SGKILMGSLFGGLKA 274 (326)
Q Consensus 206 ~-~~--~g~d~v~d~~g~~-----~~-~~~~~~~l~~~~G~~v~~g~~~~~~-~~~~~~~~~~~-~~~~i~~~~~~~~~~ 274 (326)
. .+ +++|+||+|++.+ .. .+.+++.++++ |++++++...+.. ..+.+...++. +++++.|.+ ++.
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~--n~P- 316 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT--DLP- 316 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeC--CCc-
Confidence 3 22 2799999999963 34 48999999998 9999999753322 34444445554 788998875 232
Q ss_pred CCCHH-HHHHHHhCCCCCCCccee
Q 020435 275 KSDIP-ILLKRYMDKELELDKFVT 297 (326)
Q Consensus 275 ~~~~~-~~~~l~~~g~~~~~~~i~ 297 (326)
..+. ++.+++.++.+++.++++
T Consensus 317 -~~~p~~As~lla~~~i~l~~lIt 339 (509)
T PRK09424 317 -SRLPTQSSQLYGTNLVNLLKLLC 339 (509)
T ss_pred -hhHHHHHHHHHHhCCccHHHHhc
Confidence 3454 589999999887766654
No 131
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.26 E-value=2.1e-12 Score=100.95 Aligned_cols=120 Identities=21% Similarity=0.337 Sum_probs=76.8
Q ss_pred cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCC--cHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHHhc
Q 020435 183 FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS 260 (326)
Q Consensus 183 ~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 260 (326)
||+++++|+++ .++ ...+++|+|||++| ....+..++++| ++ |+++.++. .........+
T Consensus 1 LGAd~vidy~~---~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~ 62 (127)
T PF13602_consen 1 LGADEVIDYRD---TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLK 62 (127)
T ss_dssp CT-SEEEETTC---SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHH
T ss_pred CCcCEEecCCC---ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhc
Confidence 68999999987 666 22339999999999 666446777888 98 99999873 1111111111
Q ss_pred CCEEEeeeccCC-C---CCCCHHHHHHHHhCCCCCCCcceeeeeccccHHHHHHHHHcCcee-EEEE
Q 020435 261 GKILMGSLFGGL-K---AKSDIPILLKRYMDKELELDKFVTHEMKFEEINSAFDLLIKGKCL-RCVI 322 (326)
Q Consensus 261 ~~~i~~~~~~~~-~---~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~i~~a~~~~~~~~~~-k~vv 322 (326)
...+........ . ..+.++++++++++|++++. ++++||++++.+|++.+++++.. |+||
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~~--i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 63 GRSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKPP--IDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp CHHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred ccceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEEe--eccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 222222221110 0 12459999999999976654 88899999999999999998876 9986
No 132
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.66 E-value=1.8e-07 Score=82.97 Aligned_cols=163 Identities=21% Similarity=0.316 Sum_probs=100.1
Q ss_pred hcccCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHhc----CCcEEEcCCCCCCccHHHHHHHhcC
Q 020435 134 TANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 134 ~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~-~V~~~~~~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.++++++||.+|+|+ |..+.++++..+.. +|++++.+++..+.+++. +...+-.. . .++. .+ .+.+
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~---~d~~-~l-~~~~ 144 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-L---GEIE-AL-PVAD 144 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-E---cchh-hC-CCCC
Confidence 46688999999999987 88888888887653 799999999998887753 33222111 1 1221 11 1123
Q ss_pred CCccEEEE-cC-----CcHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHHhcCCEEEeeeccCCCCCCCHHHHH
Q 020435 209 GGADYCFE-CV-----GLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHSGKILMGSLFGGLKAKSDIPILL 282 (326)
Q Consensus 209 ~g~d~v~d-~~-----g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 282 (326)
+.+|+|+. ++ .....+..+.+.|+++ |+++..+..... . +. ..+.+...+.+...+. .....++.
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~~~-~--~~--~~~~~~~~~~~~~~~~---~~~~~e~~ 215 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVLRG-E--LP--EEIRNDAELYAGCVAG---ALQEEEYL 215 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeeccC-C--CC--HHHHHhHHHHhccccC---CCCHHHHH
Confidence 38999984 32 3345689999999998 999998754322 1 11 1111122222221111 12455666
Q ss_pred HHHhC-CCCCCCcceeeeeccccHHHHHHHH
Q 020435 283 KRYMD-KELELDKFVTHEMKFEEINSAFDLL 312 (326)
Q Consensus 283 ~l~~~-g~~~~~~~i~~~~~l~~i~~a~~~~ 312 (326)
+++++ |-..........++++++.++++.+
T Consensus 216 ~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~ 246 (272)
T PRK11873 216 AMLAEAGFVDITIQPKREYRIPDAREFLEDW 246 (272)
T ss_pred HHHHHCCCCceEEEeccceecccHHHHHHHh
Confidence 66665 4333333344567889999999988
No 133
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.53 E-value=7.8e-07 Score=84.43 Aligned_cols=108 Identities=19% Similarity=0.250 Sum_probs=82.0
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCC----------CCCccHHHHHHHh
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKN----------CGDKSVSQIIIDM 206 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~----------~~~~~~~~~i~~~ 206 (326)
.++++|+|+|+|.+|++++++++.+|+ .|+++++++++++.++.+|++.+ ++..+ ...+++.+..++.
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 357899999999999999999999999 89999999999999999998653 22211 0012344444444
Q ss_pred cC---CCccEEEEcC---CcHH---HHHHHHHHhhcCCcEEEEeccCCCC
Q 020435 207 TD---GGADYCFECV---GLAS---LVQEAYACCRKGWGKTIVLGVDQPG 247 (326)
Q Consensus 207 ~~---~g~d~v~d~~---g~~~---~~~~~~~~l~~~~G~~v~~g~~~~~ 247 (326)
+. .++|+||+|+ |.+. ..+..++.++++ +.++.++...++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG 289 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG 289 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC
Confidence 43 2899999999 5432 467889999998 999999875544
No 134
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=98.35 E-value=2.1e-08 Score=94.04 Aligned_cols=156 Identities=17% Similarity=0.183 Sum_probs=103.3
Q ss_pred ccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccccccc
Q 020435 11 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS 90 (326)
Q Consensus 11 i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 90 (326)
--|.|+++.+.+|+++.+. +|++-+.. ||.|.+| ++.|..... .|...++
T Consensus 89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~l~~----------------- 138 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKVLER----------------- 138 (417)
T ss_pred cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 3578889999999998876 44444445 8899988 344443333 4545555
Q ss_pred cccccceEEecccceEE---c-CCCCCccccccccchhhhhhhh---hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcC
Q 020435 91 VSSFSEYTVLDIAHVVK---V-DPTVPPNRACLLSCGVSTGVGA---AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG 163 (326)
Q Consensus 91 ~g~~a~~~~v~~~~~~~---i-p~~~s~~~aa~l~~~~~ta~~~---l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g 163 (326)
.|++++.++. .+.. | +..+| .++.+ ..+.....++++|+|+|+|.+|..+++.++..|
T Consensus 139 --lf~~a~~~~k-~vr~~t~i~~~~vS------------v~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G 203 (417)
T TIGR01035 139 --LFQKAFSVGK-RVRTETDISAGAVS------------ISSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKG 203 (417)
T ss_pred --HHHHHHHHhh-hhhhhcCCCCCCcC------------HHHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCC
Confidence 8999888876 3332 2 22222 22222 223333457899999999999999999999999
Q ss_pred CCEEEEEcCChhHHH-HHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHH
Q 020435 164 ATRIIGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 222 (326)
Q Consensus 164 ~~~V~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~ 222 (326)
+.+|+++.++.++.+ .++.+|.. .++. .++.+.+. ++|+||+|.+.+.
T Consensus 204 ~~~V~v~~rs~~ra~~la~~~g~~-~i~~-----~~l~~~l~-----~aDvVi~aT~s~~ 252 (417)
T TIGR01035 204 VGKILIANRTYERAEDLAKELGGE-AVKF-----EDLEEYLA-----EADIVISSTGAPH 252 (417)
T ss_pred CCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----HHHHHHHh-----hCCEEEECCCCCC
Confidence 658999999988755 56667753 3322 12222221 6999999998765
No 135
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.19 E-value=2.4e-05 Score=70.17 Aligned_cols=96 Identities=20% Similarity=0.295 Sum_probs=75.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.+.+++|+|.|.+|+.+++.++.+|+ +|++.++++++.++++.+|++.+ .. .++.+.+ . ++|+||+|+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~~-----~~l~~~l----~-~aDiVI~t~ 218 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-HL-----SELAEEV----G-KIDIIFNTI 218 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-cH-----HHHHHHh----C-CCCEEEECC
Confidence 58999999999999999999999999 99999999988888888887532 21 1222222 1 699999999
Q ss_pred CcHHHHHHHHHHhhcCCcEEEEeccCCCC
Q 020435 219 GLASLVQEAYACCRKGWGKTIVLGVDQPG 247 (326)
Q Consensus 219 g~~~~~~~~~~~l~~~~G~~v~~g~~~~~ 247 (326)
+........++.++++ +.++.++...+.
T Consensus 219 p~~~i~~~~l~~~~~g-~vIIDla~~pgg 246 (296)
T PRK08306 219 PALVLTKEVLSKMPPE-ALIIDLASKPGG 246 (296)
T ss_pred ChhhhhHHHHHcCCCC-cEEEEEccCCCC
Confidence 8766556778889998 999999875443
No 136
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=98.19 E-value=4.2e-05 Score=66.95 Aligned_cols=131 Identities=21% Similarity=0.216 Sum_probs=83.3
Q ss_pred cccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 020435 93 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 172 (326)
Q Consensus 93 ~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~ 172 (326)
+|.+|.. +...++++++++++..+.--. ... ....+. ....++++||-.|+|. |.+++.+++ .|+.+|++++.
T Consensus 78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 4666644 677889999998877654211 111 111111 1256889999999987 877776554 56657999999
Q ss_pred ChhHHHHHHhc----CCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcH---HHHHHHHHHhhcCCcEEEEeccC
Q 020435 173 ISEKFEIGKRF----GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 173 ~~~~~~~~~~~----g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
++...+.+++. +....+.... .+ ..+|+|+...... ..++.+.+.|+++ |.+++.+..
T Consensus 151 s~~~l~~A~~n~~~~~~~~~~~~~~---~~----------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~ 215 (250)
T PRK00517 151 DPQAVEAARENAELNGVELNVYLPQ---GD----------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGIL 215 (250)
T ss_pred CHHHHHHHHHHHHHcCCCceEEEcc---CC----------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECc
Confidence 99988877542 2211111111 00 0599998655543 2356788899998 999988653
No 137
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.17 E-value=2.6e-05 Score=72.73 Aligned_cols=101 Identities=22% Similarity=0.250 Sum_probs=77.0
Q ss_pred hhhhhhhcccC-CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHh
Q 020435 128 VGAAWRTANVE-VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 128 ~~~l~~~~~~~-~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 206 (326)
|.++.+..++. .|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|.+ +. ++.+.+
T Consensus 199 ~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~--------~l~eal--- 265 (425)
T PRK05476 199 LDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VM--------TMEEAA--- 265 (425)
T ss_pred HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ec--------CHHHHH---
Confidence 44444443544 89999999999999999999999999 999999988887666666653 22 122222
Q ss_pred cCCCccEEEEcCCcHHHHH-HHHHHhhcCCcEEEEeccC
Q 020435 207 TDGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 207 ~~~g~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 244 (326)
.++|+||+|.|....+. ..+..++++ +.++..|..
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~ 301 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHF 301 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCC
Confidence 16999999999887665 678899998 888888764
No 138
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.15 E-value=7.5e-06 Score=73.99 Aligned_cols=107 Identities=21% Similarity=0.259 Sum_probs=79.7
Q ss_pred ceEEcCCCCCccccccccchhhhhhhhhhhhccc----CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHH-H
Q 020435 104 HVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANV----EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKF-E 178 (326)
Q Consensus 104 ~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~----~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~-~ 178 (326)
..+++|+.++.+.++... +.+++++++ +.+.. .++.+|+|+|+|.+|..+++.++..|..+|+++.+++++. +
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 677889999988888766 677787764 33332 3689999999999999999999988766899999998875 5
Q ss_pred HHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHH
Q 020435 179 IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASL 223 (326)
Q Consensus 179 ~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~ 223 (326)
.++++|.. +++. +++.+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~-----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL-----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH-----HHHHHHHh-----cCCEEEECCCCCch
Confidence 56778873 3322 12222221 58999999998874
No 139
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.10 E-value=5e-05 Score=70.49 Aligned_cols=100 Identities=23% Similarity=0.277 Sum_probs=76.3
Q ss_pred hhhhhhcc-cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhc
Q 020435 129 GAAWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 129 ~~l~~~~~-~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
.++.+..+ ...|++|+|.|.|.+|..+++.++.+|+ +|++++.++.+...++..|+. +.+ ..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal---- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT--------MEEAA---- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC--------HHHHH----
Confidence 33334434 3579999999999999999999999999 899999888877666666762 321 22222
Q ss_pred CCCccEEEEcCCcHHHHH-HHHHHhhcCCcEEEEeccC
Q 020435 208 DGGADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 208 ~~g~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 244 (326)
.+.|++|++.|....+. ..+..++++ +.++..|..
T Consensus 249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~ 284 (406)
T TIGR00936 249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHF 284 (406)
T ss_pred -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCC
Confidence 25899999999988776 488899998 888888764
No 140
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.04 E-value=3.3e-05 Score=64.53 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=84.6
Q ss_pred CCccccccccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHhcCCcE
Q 020435 112 VPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTE 187 (326)
Q Consensus 112 ~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~----~~~~~g~~~ 187 (326)
++....-.++-+...|. |.+...++++++||-+|+|. |+.++-|++..+ +|+.+.+.++=.+ .++.+|.+.
T Consensus 47 lpi~~gqtis~P~~vA~--m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVAR--MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHH--HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 33334444555656654 67889999999999999887 999999999988 7999999887433 355678644
Q ss_pred EEcCCCCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 188 FVNSKNCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 188 vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
|..... +. -+.+... .||.|+-+.+.+..-+.+++.|+++ |+++.--.
T Consensus 122 V~v~~g---DG----~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~PvG 170 (209)
T COG2518 122 VTVRHG---DG----SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIPVG 170 (209)
T ss_pred eEEEEC---Cc----ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEEEc
Confidence 432222 11 1223334 8999998888777567899999998 99887643
No 141
>PLN02494 adenosylhomocysteinase
Probab=97.95 E-value=0.0001 Score=69.18 Aligned_cols=101 Identities=18% Similarity=0.231 Sum_probs=77.9
Q ss_pred hhhhhhhccc-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHh
Q 020435 128 VGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 128 ~~~l~~~~~~-~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 206 (326)
+-++.+..++ -.|++|+|.|.|.+|..+++.++.+|+ +|+++++++.+...+...|... + ++.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v--------~leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L--------TLEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c--------cHHHHHh--
Confidence 3334454443 579999999999999999999999999 8999998887766666667642 2 1222222
Q ss_pred cCCCccEEEEcCCcHHH-HHHHHHHhhcCCcEEEEeccC
Q 020435 207 TDGGADYCFECVGLASL-VQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 207 ~~~g~d~v~d~~g~~~~-~~~~~~~l~~~~G~~v~~g~~ 244 (326)
..|+++++.+.... ....+..++++ +.++.+|..
T Consensus 309 ---~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~ 343 (477)
T PLN02494 309 ---EADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHF 343 (477)
T ss_pred ---hCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCC
Confidence 58999999998774 47899999998 999999863
No 142
>PRK08324 short chain dehydrogenase; Validated
Probab=97.94 E-value=0.00011 Score=73.59 Aligned_cols=137 Identities=19% Similarity=0.247 Sum_probs=88.3
Q ss_pred cccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc
Q 020435 93 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD 171 (326)
Q Consensus 93 ~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~ 171 (326)
++.+|..+++..++.+ +.++.+++.....+ .....+++++||+|+ |.+|..+++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5567777887777777 66666666422100 122236789999986 9999999999999999 999999
Q ss_pred CChhHHHHHHh-cCC---cEE--EcCCCCCCccHHHHHHHhc--CCCccEEEEcCCc-----------------------
Q 020435 172 VISEKFEIGKR-FGV---TEF--VNSKNCGDKSVSQIIIDMT--DGGADYCFECVGL----------------------- 220 (326)
Q Consensus 172 ~~~~~~~~~~~-~g~---~~v--i~~~~~~~~~~~~~i~~~~--~~g~d~v~d~~g~----------------------- 220 (326)
++.++.+.+.+ ++. ... .|..+ ...+.+.+.+.. .+++|++|+++|.
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd--~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD--EAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC--HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99887665433 332 112 23322 122333333332 2389999999982
Q ss_pred --HHHHHHHHHHhhc---CCcEEEEeccC
Q 020435 221 --ASLVQEAYACCRK---GWGKTIVLGVD 244 (326)
Q Consensus 221 --~~~~~~~~~~l~~---~~G~~v~~g~~ 244 (326)
....+.++..+++ + |+++.++..
T Consensus 532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~ 559 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLG-GSIVFIASK 559 (681)
T ss_pred HHHHHHHHHHHHHHhcCCC-cEEEEECCc
Confidence 1224455666666 5 789998864
No 143
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=97.89 E-value=0.00013 Score=65.02 Aligned_cols=94 Identities=18% Similarity=0.244 Sum_probs=70.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.+++++|+|.|.+|.++++.++.+|+ +|++..+++++.+.+...|... +.. .++.+.+ .++|+||+|.
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l-----~~aDiVint~ 217 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIP-FPL-----NKLEEKV-----AEIDIVINTI 217 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHh-----ccCCEEEECC
Confidence 47899999999999999999999999 9999999988877776666532 211 1222222 2699999998
Q ss_pred CcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 219 GLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 219 g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+....-...++.++++ ..++.++...
T Consensus 218 P~~ii~~~~l~~~k~~-aliIDlas~P 243 (287)
T TIGR02853 218 PALVLTADVLSKLPKH-AVIIDLASKP 243 (287)
T ss_pred ChHHhCHHHHhcCCCC-eEEEEeCcCC
Confidence 7655345677788887 8888887653
No 144
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=97.82 E-value=0.0011 Score=59.21 Aligned_cols=139 Identities=10% Similarity=0.085 Sum_probs=88.5
Q ss_pred cccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcc---cCCCCEEEEEcc-CHHHHHHHHHHH-HcCCCEE
Q 020435 93 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGL-GSIGLAVAEGAR-LCGATRI 167 (326)
Q Consensus 93 ~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~---~~~~~~vlI~Ga-g~~G~~a~~la~-~~g~~~V 167 (326)
.|-+|.++..+..+. | ... ..-+++-..+.|+|. +.+... .-..+.|+|.+| +-+++.++..++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~-~-~~e-~~~~LlrPLf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD-P-ERE-DWQMLLRPLFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC-c-chh-HHHHHHHHHHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 566777776554331 1 111 122233336677775 343332 223467777776 788888888887 4443389
Q ss_pred EEEcCChhHHHHHHhcC-CcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 168 IGVDVISEKFEIGKRFG-VTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 168 ~~~~~~~~~~~~~~~~g-~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+++. |+.+.+..+.+| .+.|+.+++ |.++....--+++|..|+......+...++...-..+.+|...
T Consensus 166 vglT-S~~N~~Fve~lg~Yd~V~~Yd~---------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th 234 (314)
T PF11017_consen 166 VGLT-SARNVAFVESLGCYDEVLTYDD---------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH 234 (314)
T ss_pred EEEe-cCcchhhhhccCCceEEeehhh---------hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence 9988 667777999999 578988876 2233223556778999999988888888888623356666543
No 145
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.75 E-value=0.00031 Score=64.97 Aligned_cols=99 Identities=20% Similarity=0.219 Sum_probs=70.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++.+.+.. ++........+ ..++.+.+ ..+|++|+|
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~~~l~~~l-----~~aDvVI~a 237 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--AYEIEDAV-----KRADLLIGA 237 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--HHHHHHHH-----ccCCEEEEc
Confidence 35679999999999999999999999 89999999888777643 55432222221 12222222 269999999
Q ss_pred CC---c--HH-HHHHHHHHhhcCCcEEEEeccCCC
Q 020435 218 VG---L--AS-LVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 218 ~g---~--~~-~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
++ . +. .....++.++++ +.++.++...+
T Consensus 238 ~~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G 271 (370)
T TIGR00518 238 VLIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG 271 (370)
T ss_pred cccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence 73 2 22 236777889998 99999986543
No 146
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.67 E-value=0.00043 Score=65.16 Aligned_cols=98 Identities=20% Similarity=0.295 Sum_probs=74.1
Q ss_pred hhhhcc-cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC
Q 020435 131 AWRTAN-VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 209 (326)
Q Consensus 131 l~~~~~-~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~ 209 (326)
+.+..+ .-.|++|+|+|.|.+|..+++.++.+|+ +|+++++++.+...+...|+.. . ++.+.+ +
T Consensus 244 ~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~--------~leell-~---- 308 (476)
T PTZ00075 244 IFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V--------TLEDVV-E---- 308 (476)
T ss_pred HHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c--------cHHHHH-h----
Confidence 444433 3469999999999999999999999999 8999988877665554456532 1 222222 1
Q ss_pred CccEEEEcCCcHHHHH-HHHHHhhcCCcEEEEeccC
Q 020435 210 GADYCFECVGLASLVQ-EAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 210 g~d~v~d~~g~~~~~~-~~~~~l~~~~G~~v~~g~~ 244 (326)
.+|+|+.+.+....+. ..+..++++ +.++.+|..
T Consensus 309 ~ADIVI~atGt~~iI~~e~~~~MKpG-AiLINvGr~ 343 (476)
T PTZ00075 309 TADIFVTATGNKDIITLEHMRRMKNN-AIVGNIGHF 343 (476)
T ss_pred cCCEEEECCCcccccCHHHHhccCCC-cEEEEcCCC
Confidence 5899999999877664 889999998 999999864
No 147
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.62 E-value=9.3e-05 Score=69.82 Aligned_cols=160 Identities=19% Similarity=0.185 Sum_probs=95.6
Q ss_pred ccCCceeEEEEEecCCCCCccCCCEEeecCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCCccccccCCcccccccc
Q 020435 11 ILGHEAIGVVESVGENVDGVVEGDVVIPHFLADCTECVGCRSKKGNLCSAFPFKISPWMPRDQTSRFKDLRGETIHHFVS 90 (326)
Q Consensus 11 i~G~e~~G~V~~~G~~v~~~~vGd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~ 90 (326)
--|||+++.+.+|+++.+..-+|+.=+ |+.|... ++.|..... .|...++
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~a----~~~a~~~g~---~g~~l~~----------------- 140 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKDA----YALAQEAGT---VGTILNR----------------- 140 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHHH----HHHHHHcCC---chHHHHH-----------------
Confidence 358999999999999887755555432 3333321 111111110 1212222
Q ss_pred cccccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcc---cCCCCEEEEEccCHHHHHHHHHHHHcCCCEE
Q 020435 91 VSSFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTAN---VEVGSTVVIFGLGSIGLAVAEGARLCGATRI 167 (326)
Q Consensus 91 ~g~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~---~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V 167 (326)
.|++.+.+ |+.+..+.+. ...+.+++++++..... -.++++|+|+|+|.+|.++++.++..|+.+|
T Consensus 141 --lf~~a~~~--------~k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V 209 (423)
T PRK00045 141 --LFQKAFSV--------AKRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI 209 (423)
T ss_pred --HHHHHHHH--------HhhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence 45444433 3333333222 22255666666433222 2578999999999999999999999998689
Q ss_pred EEEcCChhHHH-HHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHH
Q 020435 168 IGVDVISEKFE-IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 222 (326)
Q Consensus 168 ~~~~~~~~~~~-~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~ 222 (326)
+++.++.++.+ +++.+|.+ +++.. ++.+.+ .++|+||+|++.+.
T Consensus 210 ~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l-----~~aDvVI~aT~s~~ 254 (423)
T PRK00045 210 TVANRTLERAEELAEEFGGE-AIPLD-----ELPEAL-----AEADIVISSTGAPH 254 (423)
T ss_pred EEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHh-----ccCCEEEECCCCCC
Confidence 99999988865 56667753 33221 122222 26999999998765
No 148
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.61 E-value=5.2e-05 Score=74.36 Aligned_cols=80 Identities=19% Similarity=0.271 Sum_probs=58.5
Q ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC---------------------hhHHHHHHhcCCcEEEcCCCC
Q 020435 136 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI---------------------SEKFEIGKRFGVTEFVNSKNC 194 (326)
Q Consensus 136 ~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~---------------------~~~~~~~~~~g~~~vi~~~~~ 194 (326)
...+|++|+|+|+|++|+++++.++..|+ +|++++.. +.+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~- 210 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRV- 210 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEE-
Confidence 36789999999999999999999999999 89888743 24556678899876665322
Q ss_pred CCccH-HHHHHHhcCCCccEEEEcCCcHH
Q 020435 195 GDKSV-SQIIIDMTDGGADYCFECVGLAS 222 (326)
Q Consensus 195 ~~~~~-~~~i~~~~~~g~d~v~d~~g~~~ 222 (326)
..+. .+.+ ..++|+||+++|...
T Consensus 211 -~~~~~~~~~----~~~~D~Vi~AtG~~~ 234 (564)
T PRK12771 211 -GEDITLEQL----EGEFDAVFVAIGAQL 234 (564)
T ss_pred -CCcCCHHHH----HhhCCEEEEeeCCCC
Confidence 0111 1222 127999999999764
No 149
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.59 E-value=0.00028 Score=55.60 Aligned_cols=74 Identities=24% Similarity=0.300 Sum_probs=55.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc--EEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~--~vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
++.+++|+|+|++|.+++..+...|+++++++.|+.++.+.+ ..++.. .++..++ +.+.+. .+|+||
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~-----~~~~~~-----~~DivI 80 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED-----LEEALQ-----EADIVI 80 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG-----HCHHHH-----TESEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH-----HHHHHh-----hCCeEE
Confidence 588999999999999999999999997899999999987765 445322 3444433 212221 699999
Q ss_pred EcCCcHH
Q 020435 216 ECVGLAS 222 (326)
Q Consensus 216 d~~g~~~ 222 (326)
+|.+.++
T Consensus 81 ~aT~~~~ 87 (135)
T PF01488_consen 81 NATPSGM 87 (135)
T ss_dssp E-SSTTS
T ss_pred EecCCCC
Confidence 9988764
No 150
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.57 E-value=0.00045 Score=58.95 Aligned_cols=79 Identities=22% Similarity=0.289 Sum_probs=59.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC----cEEEcCCCCCCccHHHHHHHhcCC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV----TEFVNSKNCGDKSVSQIIIDMTDG--G 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~----~~vi~~~~~~~~~~~~~i~~~~~~--g 210 (326)
+++.++|+|| +++|.+.++.+...|+ +|+.+.|..++++.+. +++. ...+|..+ .....+.+..+..+ .
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD--~~~~~~~i~~~~~~~g~ 81 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD--RAAVEAAIEALPEEFGR 81 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC--HHHHHHHHHHHHHhhCc
Confidence 3578999998 8999999999999999 9999999999998764 4662 23344444 23444455555555 7
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+.++.+|-
T Consensus 82 iDiLvNNAGl 91 (246)
T COG4221 82 IDILVNNAGL 91 (246)
T ss_pred ccEEEecCCC
Confidence 9999998885
No 151
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.56 E-value=0.0005 Score=61.50 Aligned_cols=97 Identities=20% Similarity=0.249 Sum_probs=63.8
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc----CCc-EEEcCCCCCCccHHHHHHHhcCCCc
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF----GVT-EFVNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~----g~~-~vi~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
..++++||-.|+|. |.+++.+++ .|+.+|++++.++...+.+++. +.. .+..... + ......+++
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~----~----~~~~~~~~f 226 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI----Y----LEQPIEGKA 226 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec----c----cccccCCCc
Confidence 45789999999887 777776665 4655899999999887776542 221 1111111 1 111223389
Q ss_pred cEEEEcCCcH---HHHHHHHHHhhcCCcEEEEeccC
Q 020435 212 DYCFECVGLA---SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 212 d~v~d~~g~~---~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|+|+...... ..+..+.+.|+++ |.++..+..
T Consensus 227 DlVvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~ 261 (288)
T TIGR00406 227 DVIVANILAEVIKELYPQFSRLVKPG-GWLILSGIL 261 (288)
T ss_pred eEEEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCc
Confidence 9999655433 3456778999998 999987753
No 152
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.53 E-value=0.0018 Score=55.83 Aligned_cols=104 Identities=21% Similarity=0.225 Sum_probs=67.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hh---cCCcEEEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FGVTEFVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~---~g~~~vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
.+++|||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ .. .+..+.+..+-...+...+.+.+... +++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3679999987 9999999999999999 999999998877655 22 22223332221011223332332221 268
Q ss_pred cEEEEcCCcH-----------------------HHHHHHHHHhhcCCcEEEEeccC
Q 020435 212 DYCFECVGLA-----------------------SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 212 d~v~d~~g~~-----------------------~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|.++.+.+.. ...+.....++++ |+++.++..
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~ 137 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSM 137 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecc
Confidence 9999888741 1244555667777 899998864
No 153
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.42 E-value=0.00083 Score=55.65 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=58.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---CcEEEcCCCCCCccHHH-HHHHhcCC--Cc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---VTEFVNSKNCGDKSVSQ-IIIDMTDG--GA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g---~~~vi~~~~~~~~~~~~-~i~~~~~~--g~ 211 (326)
.|.+|||+|+ ++||+.+++-...+|- +||...|++++++.+++.- ...+.|..+ .+-.+ .+.++..+ ..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence 4789999975 8999999999999997 9999999999999987643 344555555 33223 33333333 89
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
+++++++|-
T Consensus 80 NvliNNAGI 88 (245)
T COG3967 80 NVLINNAGI 88 (245)
T ss_pred heeeecccc
Confidence 999999885
No 154
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.42 E-value=0.0018 Score=53.09 Aligned_cols=105 Identities=20% Similarity=0.324 Sum_probs=72.2
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCcEEEcCCCCCCccHHHHHHHhc
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
+...++++++.++=+|+|. |...+++++.....+|++++++++..+..+ +||.+.+..... +-.+.+....
T Consensus 27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~ 101 (187)
T COG2242 27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP 101 (187)
T ss_pred HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC
Confidence 3567889999888889865 667778886554459999999999888764 488764332221 1122222211
Q ss_pred CCCccEEEEcCC--cHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 208 DGGADYCFECVG--LASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 208 ~~g~d~v~d~~g--~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.+|.+|=--| -+..++.+|..|+++ |++|.-...
T Consensus 102 --~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nait 137 (187)
T COG2242 102 --SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAIT 137 (187)
T ss_pred --CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEeec
Confidence 6999984333 245688999999998 999987654
No 155
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.39 E-value=0.0014 Score=60.94 Aligned_cols=110 Identities=17% Similarity=0.251 Sum_probs=75.0
Q ss_pred hhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHH
Q 020435 123 GVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQI 202 (326)
Q Consensus 123 ~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~ 202 (326)
.-...+..+.+..+++++++||.+|+|. |.++..+++..|+ +|++++.+++..+.+++.....-+.... .++.
T Consensus 151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~---~D~~-- 223 (383)
T PRK11705 151 AQEAKLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL---QDYR-- 223 (383)
T ss_pred HHHHHHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE---Cchh--
Confidence 3334455566778889999999999864 7777888888898 9999999999998887643211111111 1221
Q ss_pred HHHhcCCCccEEEEc-----CCc---HHHHHHHHHHhhcCCcEEEEecc
Q 020435 203 IIDMTDGGADYCFEC-----VGL---ASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 203 i~~~~~~g~d~v~d~-----~g~---~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.. .+.+|.|+.. ++. ...++.+.+.|+|+ |.+++...
T Consensus 224 --~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~i 268 (383)
T PRK11705 224 --DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHTI 268 (383)
T ss_pred --hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 11 2479998743 333 34578889999998 99988653
No 156
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.31 E-value=0.003 Score=53.13 Aligned_cols=103 Identities=19% Similarity=0.389 Sum_probs=70.3
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcC-CcEEEcCCCCCCccHHHHHHH
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFG-VTEFVNSKNCGDKSVSQIIID 205 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~----~~g-~~~vi~~~~~~~~~~~~~i~~ 205 (326)
.....+.++++||..|+|. |.+++.+++..+. .+|++++.+++..+.++ .++ .+.+.... .+..+.+..
T Consensus 33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~----~d~~~~l~~ 107 (198)
T PRK00377 33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK----GEAPEILFT 107 (198)
T ss_pred HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE----echhhhHhh
Confidence 3456788999999999988 8888888887642 38999999998887654 355 23222111 122222222
Q ss_pred hcCCCccEEEEcCCc---HHHHHHHHHHhhcCCcEEEEe
Q 020435 206 MTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 206 ~~~~g~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 241 (326)
..+.+|.||...+. ...+..+.+.|+++ |+++..
T Consensus 108 -~~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~ 144 (198)
T PRK00377 108 -INEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID 144 (198)
T ss_pred -cCCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence 22379999975543 34577888999998 998853
No 157
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.30 E-value=0.0046 Score=55.99 Aligned_cols=103 Identities=21% Similarity=0.296 Sum_probs=72.3
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcCCcEEEcCCCCCCccHHHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIID 205 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~ 205 (326)
+.+...++++++||..|+|. |..++.+++..+. ..|++++.+++..+.++ ..|.+.+..... +..+.+..
T Consensus 72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g----D~~~~~~~ 146 (322)
T PRK13943 72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG----DGYYGVPE 146 (322)
T ss_pred HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC----Chhhcccc
Confidence 44667788999999999984 9999999988763 26999999998766554 356554332221 22211111
Q ss_pred hcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 206 MTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 206 ~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.+.+|+|+.+.+.........+.|+++ |+++..
T Consensus 147 --~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~ 179 (322)
T PRK13943 147 --FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP 179 (322)
T ss_pred --cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence 127999999888766566788999998 998764
No 158
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=97.28 E-value=0.002 Score=53.31 Aligned_cols=89 Identities=30% Similarity=0.392 Sum_probs=62.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.|.+|.|+|.|.+|..++++++.+|+ +|++.+++....+.....+.. . .++.+.+.+ .|+|+.+.
T Consensus 35 ~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~-~--------~~l~ell~~-----aDiv~~~~ 99 (178)
T PF02826_consen 35 RGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVE-Y--------VSLDELLAQ-----ADIVSLHL 99 (178)
T ss_dssp TTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEE-E--------SSHHHHHHH------SEEEE-S
T ss_pred CCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhcccccce-e--------eehhhhcch-----hhhhhhhh
Confidence 58999999999999999999999999 999999998877645555431 1 234443433 78998766
Q ss_pred Cc-H----HHHHHHHHHhhcCCcEEEEecc
Q 020435 219 GL-A----SLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 219 g~-~----~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.. + .+-...+..++++ ..+|.++.
T Consensus 100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR 128 (178)
T PF02826_consen 100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR 128 (178)
T ss_dssp SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred ccccccceeeeeeeeeccccc-eEEEeccc
Confidence 63 2 1234667888887 77776653
No 159
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.20 E-value=0.0026 Score=55.58 Aligned_cols=81 Identities=22% Similarity=0.277 Sum_probs=56.6
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCc-EEEcCCCCCCccHHHHHH-HhcCC
Q 020435 138 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EFVNSKNCGDKSVSQIII-DMTDG 209 (326)
Q Consensus 138 ~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-----~g~~-~vi~~~~~~~~~~~~~i~-~~~~~ 209 (326)
..+.++||+|| ++||...+..+...|. +|+.+.|++++++.+.+ .+.+ +++.-|= .+.+-.+.+. ++...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DL-s~~~~~~~l~~~l~~~ 81 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADL-SDPEALERLEDELKER 81 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcC-CChhHHHHHHHHHHhc
Confidence 45789999998 8999999999999999 99999999999887643 2322 2332221 1123233333 33322
Q ss_pred --CccEEEEcCCc
Q 020435 210 --GADYCFECVGL 220 (326)
Q Consensus 210 --g~d~v~d~~g~ 220 (326)
.+|+.++++|-
T Consensus 82 ~~~IdvLVNNAG~ 94 (265)
T COG0300 82 GGPIDVLVNNAGF 94 (265)
T ss_pred CCcccEEEECCCc
Confidence 89999999995
No 160
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0023 Score=56.62 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=54.5
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCCCCCccHHHHHHHhcC--CCccEEEE
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADYCFE 216 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~~~~--~g~d~v~d 216 (326)
.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+...+...+ .|..+ .+++.+.+.+... +++|++++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND--GAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899987 9999999999988999 99999999888777665554333 34333 2333333333322 37999999
Q ss_pred cCCc
Q 020435 217 CVGL 220 (326)
Q Consensus 217 ~~g~ 220 (326)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9883
No 161
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=97.17 E-value=0.00097 Score=56.53 Aligned_cols=109 Identities=19% Similarity=0.270 Sum_probs=70.8
Q ss_pred ccchhhhhhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHH----HhcCCcEE--EcCC
Q 020435 120 LSCGVSTGVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIG----KRFGVTEF--VNSK 192 (326)
Q Consensus 120 l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~-~V~~~~~~~~~~~~~----~~~g~~~v--i~~~ 192 (326)
++.+...| .+.+.+.+++|++||-+|+|. |+.++-+++..|.. +|+.+++.++-.+.+ +.++.+.+ +..+
T Consensus 55 is~P~~~a--~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd 131 (209)
T PF01135_consen 55 ISAPSMVA--RMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD 131 (209)
T ss_dssp E--HHHHH--HHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-
T ss_pred chHHHHHH--HHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc
Confidence 33344444 367888899999999999876 88888888887743 699999888755544 34565433 2221
Q ss_pred CCCCccHHHHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 193 NCGDKSVSQIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 193 ~~~~~~~~~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
. . .-+... +||.|+-+.+-+..-...++.|+++ |++|..
T Consensus 132 g-----~----~g~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p 171 (209)
T PF01135_consen 132 G-----S----EGWPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP 171 (209)
T ss_dssp G-----G----GTTGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred h-----h----hccccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence 1 0 111223 8999998777777567889999998 999874
No 162
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0044 Score=54.95 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=55.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCCCCCccHHHHHHH---hcCCCccE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIID---MTDGGADY 213 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~---~~~~g~d~ 213 (326)
.+.+|||+|+ |.+|..+++.+...|. +|+++++++++.+.+.+.+.+.+ .|..+ .+++.+.+.+ ..++.+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE--PESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC--HHHHHHHHHHHHHHcCCCccE
Confidence 3578999997 9999999999888999 99999999988887766565432 23332 1222222332 23348999
Q ss_pred EEEcCC
Q 020435 214 CFECVG 219 (326)
Q Consensus 214 v~d~~g 219 (326)
+++++|
T Consensus 80 li~~Ag 85 (277)
T PRK05993 80 LFNNGA 85 (277)
T ss_pred EEECCC
Confidence 999876
No 163
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=97.12 E-value=0.007 Score=55.84 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=69.9
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC---C-cEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG---V-TEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g---~-~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
.+|||+|+|.+|+.+++.+...+-.+|++.+++.++.+.+.... . ...+|..+ .+.+.+.|+ ++|+||+
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d--~~al~~li~-----~~d~VIn 74 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD--VDALVALIK-----DFDLVIN 74 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC--hHHHHHHHh-----cCCEEEE
Confidence 57999999999999999988877449999999999998886653 2 23445444 222333332 4699999
Q ss_pred cCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 217 CVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 217 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|.+.......+-.+++.+ =.++.+...
T Consensus 75 ~~p~~~~~~i~ka~i~~g-v~yvDts~~ 101 (389)
T COG1748 75 AAPPFVDLTILKACIKTG-VDYVDTSYY 101 (389)
T ss_pred eCCchhhHHHHHHHHHhC-CCEEEcccC
Confidence 999887565555777776 777777654
No 164
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=97.09 E-value=0.0047 Score=52.31 Aligned_cols=101 Identities=14% Similarity=0.167 Sum_probs=68.3
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCc---EEEcCCCCCCccHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQI 202 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~ 202 (326)
+.+...++++++||-.|+|. |..+..+++..+ ..+|++++.+++..+.+++ .+.. .++..+. .+.
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~------~~~ 136 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG------KRG 136 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc------ccC
Confidence 45667788999999999876 777777777764 2289999999887766543 4432 2333222 111
Q ss_pred HHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 203 IIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 203 i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+. ..+.+|.|+-+.......+.+.+.|+++ |+++..
T Consensus 137 ~~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~ 172 (205)
T PRK13944 137 LE--KHAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP 172 (205)
T ss_pred Cc--cCCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence 10 1128999996666556567888999998 998764
No 165
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.06 E-value=0.015 Score=47.95 Aligned_cols=93 Identities=18% Similarity=0.247 Sum_probs=64.2
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCc-
Q 020435 143 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL- 220 (326)
Q Consensus 143 vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~- 220 (326)
|+|.|+ |.+|..+++.+...|. +|++++|++++.+. ..+.+ ++..+- .+. +.+.+... ++|.||.+.+.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~---~d~-~~~~~al~-~~d~vi~~~~~~ 71 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDL---FDP-DSVKAALK-GADAVIHAAGPP 71 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCT---TCH-HHHHHHHT-TSSEEEECCHST
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeee---hhh-hhhhhhhh-hcchhhhhhhhh
Confidence 789998 9999999999999998 99999999998877 44443 333333 222 33343333 79999999984
Q ss_pred ---HHHHHHHHHHhhcC-CcEEEEeccC
Q 020435 221 ---ASLVQEAYACCRKG-WGKTIVLGVD 244 (326)
Q Consensus 221 ---~~~~~~~~~~l~~~-~G~~v~~g~~ 244 (326)
.......++.++.. -.+++.++..
T Consensus 72 ~~~~~~~~~~~~a~~~~~~~~~v~~s~~ 99 (183)
T PF13460_consen 72 PKDVDAAKNIIEAAKKAGVKRVVYLSSA 99 (183)
T ss_dssp TTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred cccccccccccccccccccccceeeecc
Confidence 23355666666554 1367776643
No 166
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.04 E-value=0.0029 Score=55.61 Aligned_cols=107 Identities=20% Similarity=0.324 Sum_probs=76.5
Q ss_pred hhhhhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---EEEcCCCCCCccH
Q 020435 127 GVGAAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSV 199 (326)
Q Consensus 127 a~~~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~ 199 (326)
++..+.+.+++++|++||=+|+|- |.+++.+|+..|+ +|++++-|++..+.+++ .|.. +++-.+- .++
T Consensus 60 k~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~---rd~ 134 (283)
T COG2230 60 KLDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDY---RDF 134 (283)
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEeccc---ccc
Confidence 334467889999999999999877 7788899999999 99999999998777654 4532 1221111 111
Q ss_pred HHHHHHhcCCCccEEE-----EcCCc---HHHHHHHHHHhhcCCcEEEEeccCCCC
Q 020435 200 SQIIIDMTDGGADYCF-----ECVGL---ASLVQEAYACCRKGWGKTIVLGVDQPG 247 (326)
Q Consensus 200 ~~~i~~~~~~g~d~v~-----d~~g~---~~~~~~~~~~l~~~~G~~v~~g~~~~~ 247 (326)
. +.||-|+ +.+|. +..+..+.+.|+++ |++.+.......
T Consensus 135 -------~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~ 181 (283)
T COG2230 135 -------E-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD 181 (283)
T ss_pred -------c-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence 1 2477774 35554 44588899999998 999998775544
No 167
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=97.03 E-value=0.01 Score=49.43 Aligned_cols=100 Identities=19% Similarity=0.168 Sum_probs=63.3
Q ss_pred hcccCCCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCCCCCccHHHHHHHhcCC-C
Q 020435 134 TANVEVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTDG-G 210 (326)
Q Consensus 134 ~~~~~~~~~vlI~Gag~~G~~a~~la~~-~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~~~~~-g 210 (326)
...++++++||.+|+|+-+. +..+++. .+..+|++++.++.. +..+.+.+ .+..+ ....+.+.+..+. +
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~---~~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTD---EEVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCC---hhHHHHHHHHhCCCC
Confidence 45578999999999877444 4444443 343389999988754 11233322 13222 3444555555555 8
Q ss_pred ccEEEE-cC----Cc------------HHHHHHHHHHhhcCCcEEEEec
Q 020435 211 ADYCFE-CV----GL------------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 211 ~d~v~d-~~----g~------------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+|+|+. .. |. ...+..+.++|+++ |+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence 999994 32 21 34577889999998 9998864
No 168
>PRK00536 speE spermidine synthase; Provisional
Probab=97.02 E-value=0.003 Score=55.32 Aligned_cols=99 Identities=12% Similarity=-0.045 Sum_probs=69.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC-cEEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~-~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
...++|||+|+|- |.++-.++|+. . +|+.++-+++-.+.+++ ++. ...++... -.+...+.+...+.+|+||
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~-~-~v~mVeID~~Vv~~~k~~lP~~~~~~~DpR---v~l~~~~~~~~~~~fDVII 144 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD-T-HVDFVQADEKILDSFISFFPHFHEVKNNKN---FTHAKQLLDLDIKKYDLII 144 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC-C-eeEEEECCHHHHHHHHHHCHHHHHhhcCCC---EEEeehhhhccCCcCCEEE
Confidence 4578999998766 56677888885 3 89999999988888887 331 11222222 2222233333334899997
Q ss_pred -EcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 216 -ECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 216 -d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
|+...+..++.+.++|+++ |.++.-+.
T Consensus 145 vDs~~~~~fy~~~~~~L~~~-Gi~v~Qs~ 172 (262)
T PRK00536 145 CLQEPDIHKIDGLKRMLKED-GVFISVAK 172 (262)
T ss_pred EcCCCChHHHHHHHHhcCCC-cEEEECCC
Confidence 8788888889999999998 99988754
No 169
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=97.02 E-value=0.0028 Score=47.77 Aligned_cols=94 Identities=23% Similarity=0.301 Sum_probs=62.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHHHh-c---C-CcEEEcCCCCCCccHHHHHHHhcCCCcc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGKR-F---G-VTEFVNSKNCGDKSVSQIIIDMTDGGAD 212 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~-~g~~~V~~~~~~~~~~~~~~~-~---g-~~~vi~~~~~~~~~~~~~i~~~~~~g~d 212 (326)
|+++||-.|+|. |.+++.+++. .++ +|++++.+++..+.+++ . + .+.+--.. .++ . ......+++|
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~----~d~-~-~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ----GDA-E-FDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE----SCC-H-GGTTTSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE----Ccc-c-cCcccCCCCC
Confidence 578999999876 7788888884 677 99999999998887754 2 2 12221111 122 1 1111122899
Q ss_pred EEEEcC-Cc---H------HHHHHHHHHhhcCCcEEEEe
Q 020435 213 YCFECV-GL---A------SLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 213 ~v~d~~-g~---~------~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+... .. . ..++.+.+.|+++ |+++..
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~ 110 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN 110 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 999766 21 1 2377889999998 998764
No 170
>PRK06182 short chain dehydrogenase; Validated
Probab=96.99 E-value=0.0044 Score=54.71 Aligned_cols=79 Identities=19% Similarity=0.278 Sum_probs=55.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCCCCCccHHHHHHHhc--CCCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMT--DGGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~~~--~~g~d~v 214 (326)
++.+++|+|+ |.+|..+++.+...|. +|+++++++++.+.+...+...+ .|..+ .+++.+.+.+.. .+++|++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~~~id~l 78 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD--EASIKAAVDTIIAEEGRIDVL 78 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC--HHHHHHHHHHHHHhcCCCCEE
Confidence 3578999997 9999999999988999 99999999888776655454322 23333 233333343332 2389999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
++++|.
T Consensus 79 i~~ag~ 84 (273)
T PRK06182 79 VNNAGY 84 (273)
T ss_pred EECCCc
Confidence 999874
No 171
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=96.96 E-value=0.017 Score=56.06 Aligned_cols=105 Identities=14% Similarity=0.130 Sum_probs=66.1
Q ss_pred hcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---------cCC-----cEEEcCCCCCCcc
Q 020435 134 TANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---------FGV-----TEFVNSKNCGDKS 198 (326)
Q Consensus 134 ~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~---------~g~-----~~vi~~~~~~~~~ 198 (326)
..+.+.|.+|||+|+ |.+|..+++.+...|. +|++++++.++.+.+.+ .|. ..++..+- .+
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDL---tD 149 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDL---EK 149 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecC---CC
Confidence 455678899999997 9999999999988998 99999999887654321 121 11222111 11
Q ss_pred HHHHHHHhcCCCccEEEEcCCcHH---------------HHHHHHHHhhcC-CcEEEEeccC
Q 020435 199 VSQIIIDMTDGGADYCFECVGLAS---------------LVQEAYACCRKG-WGKTIVLGVD 244 (326)
Q Consensus 199 ~~~~i~~~~~~g~d~v~d~~g~~~---------------~~~~~~~~l~~~-~G~~v~~g~~ 244 (326)
.+.+.+.. +++|+||+++|... ....+++.+... .++||.++..
T Consensus 150 -~esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi 209 (576)
T PLN03209 150 -PDQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL 209 (576)
T ss_pred -HHHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence 22333333 37999999987531 122334444332 2689988764
No 172
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.0058 Score=52.30 Aligned_cols=77 Identities=14% Similarity=0.177 Sum_probs=52.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEE--cCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi--~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+++++...++ |..+ .+++.+.+..+..+++|+++.+
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND--PASLDQLLQRLQGQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC--HHHHHHHHHHhhcCCCCEEEEc
Confidence 47899987 9999999998888899 999999988777666554322222 2222 1223333333333489999988
Q ss_pred CCc
Q 020435 218 VGL 220 (326)
Q Consensus 218 ~g~ 220 (326)
+|.
T Consensus 79 ag~ 81 (225)
T PRK08177 79 AGI 81 (225)
T ss_pred Ccc
Confidence 754
No 173
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.95 E-value=0.0024 Score=54.46 Aligned_cols=100 Identities=18% Similarity=0.286 Sum_probs=69.0
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc--EEEcCCCCCCccHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQII 203 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~i 203 (326)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|.. .++..+. ..
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~---~~----- 138 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDG---TL----- 138 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCc---cc-----
Confidence 56677889999999999876 7777777877653 289999999988776653 3432 2332221 00
Q ss_pred HHhcC-CCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 204 IDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 204 ~~~~~-~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
.... +.+|.|+-........+...+.|+++ |+++..
T Consensus 139 -~~~~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~ 175 (212)
T PRK13942 139 -GYEENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP 175 (212)
T ss_pred -CCCcCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence 1112 28999985554455467889999998 998875
No 174
>PRK12742 oxidoreductase; Provisional
Probab=96.93 E-value=0.024 Score=48.69 Aligned_cols=100 Identities=23% Similarity=0.280 Sum_probs=62.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHHhcCCCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~-~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~i~~~~~~g~d~v 214 (326)
.+++|||+|+ |.+|..+++.+...|+ +|+.+.+ ++++.+.+ .+++...+ .|..+ .+.+.+.+.+. +++|++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~--~~~~~~~~~~~--~~id~l 79 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD--RDAVIDVVRKS--GALDIL 79 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC--HHHHHHHHHHh--CCCcEE
Confidence 3679999987 9999999999999999 8877754 44444443 44554322 22222 12233333221 379999
Q ss_pred EEcCCcHH-------------------------HHHHHHHHhhcCCcEEEEeccC
Q 020435 215 FECVGLAS-------------------------LVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 215 ~d~~g~~~-------------------------~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|+++|... ..+.+...++.. |+++.++..
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~ 133 (237)
T PRK12742 80 VVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSV 133 (237)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEecc
Confidence 99887421 012334456676 899988764
No 175
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.92 E-value=0.016 Score=48.46 Aligned_cols=104 Identities=19% Similarity=0.184 Sum_probs=71.5
Q ss_pred CCCEEEEEc-c-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCc-EEEcCCCCCCccH---HHHHHHhcCCCc
Q 020435 139 VGSTVVIFG-L-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVT-EFVNSKNCGDKSV---SQIIIDMTDGGA 211 (326)
Q Consensus 139 ~~~~vlI~G-a-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~~-~vi~~~~~~~~~~---~~~i~~~~~~g~ 211 (326)
....|||+| + |+||.+++.-....|+ .|+++.|+-+....+. ++|.. .-+|..+ +++. ..+++..+.|..
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~--~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSK--PEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCC--hHHHHHHHHHHhhCCCCce
Confidence 467899997 4 9999999888888999 9999999999888765 67632 2334333 2333 345555566699
Q ss_pred cEEEEcCCcH--------------------------HHHHHHHHHhhcCCcEEEEeccCCC
Q 020435 212 DYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 212 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
|+.++.+|.+ ..-.....+++.- |++|.+|...+
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~ 142 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAG 142 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeE
Confidence 9999877752 1011123456675 99999987643
No 176
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.90 E-value=0.019 Score=43.85 Aligned_cols=102 Identities=22% Similarity=0.321 Sum_probs=67.9
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII 204 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~i~ 204 (326)
+.....+.++++||-.|+|. |..+..+++..+..+|++++.++...+.+++ .+.. .++..+. ... ..
T Consensus 11 ~~~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~---~~~---~~ 83 (124)
T TIGR02469 11 TLSKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDA---PEA---LE 83 (124)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccc---ccc---Ch
Confidence 34455667788999999877 8888888988653489999999988777643 3332 2222221 110 11
Q ss_pred HhcCCCccEEEEcCCc---HHHHHHHHHHhhcCCcEEEEe
Q 020435 205 DMTDGGADYCFECVGL---ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 205 ~~~~~g~d~v~d~~g~---~~~~~~~~~~l~~~~G~~v~~ 241 (326)
. ..+.+|+|+..... ...++.+.+.|+++ |.++..
T Consensus 84 ~-~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~ 121 (124)
T TIGR02469 84 D-SLPEPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLN 121 (124)
T ss_pred h-hcCCCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEE
Confidence 1 11279999865432 23578899999998 998865
No 177
>PRK06139 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0058 Score=55.76 Aligned_cols=79 Identities=27% Similarity=0.354 Sum_probs=53.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-EE--cCCCCCCccHHHHHHHhc--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FV--NSKNCGDKSVSQIIIDMT--D 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-vi--~~~~~~~~~~~~~i~~~~--~ 208 (326)
.++++||+|+ |++|.++++.+...|+ +|+.+++++++.+.+ ++.|.+. ++ |..+ .+++.+.+.+.. .
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 82 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD--ADQVKALATQAASFG 82 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC--HHHHHHHHHHHHHhc
Confidence 4679999997 8999999999999999 899999998876543 3345432 22 3222 122222222221 2
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|+++|.
T Consensus 83 g~iD~lVnnAG~ 94 (330)
T PRK06139 83 GRIDVWVNNVGV 94 (330)
T ss_pred CCCCEEEECCCc
Confidence 489999999884
No 178
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0067 Score=52.89 Aligned_cols=81 Identities=16% Similarity=0.229 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cC-CcEEEcCCCCCCccHHHHHHHhc--CCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FG-VTEFVNSKNCGDKSVSQIIIDMT--DGG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g-~~~vi~~~~~~~~~~~~~i~~~~--~~g 210 (326)
.+.+|||+|+ |.+|..+++.+...|+ +|+++.+++++.+.+.. .+ ..+++..+-...+++.+.+.+.. .++
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4789999987 9999999999999999 89999998887654432 12 11233222101233333333322 137
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++++.+.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 9999998883
No 179
>PRK08265 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.017 Score=50.67 Aligned_cols=79 Identities=22% Similarity=0.319 Sum_probs=53.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +.++.. ..+ |..+ .+++.+.+.+... +.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD--DAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999987 9999999999999999 999999988765544 344422 222 2222 2333333333322 379
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|+++++.|.
T Consensus 82 d~lv~~ag~ 90 (261)
T PRK08265 82 DILVNLACT 90 (261)
T ss_pred CEEEECCCC
Confidence 999998874
No 180
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.02 Score=49.19 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC---CcEEEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VTEFVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g---~~~vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ +++. .-+.+..+-.+..++.+.+.+... +++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999987 9999999998888899 899999988776544 3332 112222121012333333433322 279
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++|++.+.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999998764
No 181
>PRK08017 oxidoreductase; Provisional
Probab=96.86 E-value=0.0049 Score=53.69 Aligned_cols=77 Identities=23% Similarity=0.325 Sum_probs=54.5
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEE-EcCCCCCCccH---HHHHHHhcCCCccEEE
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEF-VNSKNCGDKSV---SQIIIDMTDGGADYCF 215 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~v-i~~~~~~~~~~---~~~i~~~~~~g~d~v~ 215 (326)
+++||+|+ |.+|..+++.+...|. +|++++++.++.+.+++.+++.+ .|..+ ...+ .+.+.+...+.+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD--PESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC--HHHHHHHHHHHHHhcCCCCeEEE
Confidence 47999998 9999999999999999 89999999988887777775433 23322 1222 2233333334789988
Q ss_pred EcCCc
Q 020435 216 ECVGL 220 (326)
Q Consensus 216 d~~g~ 220 (326)
.+.+.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 88763
No 182
>PRK07109 short chain dehydrogenase; Provisional
Probab=96.83 E-value=0.028 Score=51.35 Aligned_cols=79 Identities=19% Similarity=0.159 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-E--EcCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..|.+. . .|..+ .+++.+.+.+...
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d--~~~v~~~~~~~~~~~ 83 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD--AEAVQAAADRAEEEL 83 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC--HHHHHHHHHHHHHHC
Confidence 4679999987 9999999999988999 899999988776543 3345332 2 23322 1223332332221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|++++.
T Consensus 84 g~iD~lInnAg~ 95 (334)
T PRK07109 84 GPIDTWVNNAMV 95 (334)
T ss_pred CCCCEEEECCCc
Confidence 379999998874
No 183
>PRK07806 short chain dehydrogenase; Provisional
Probab=96.79 E-value=0.024 Score=49.09 Aligned_cols=101 Identities=18% Similarity=0.190 Sum_probs=61.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHHH----HHhcCCc-EEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~-~~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ |.+|..+++.+...|. +|+++.++.+ +.+. ++..+.. ..+ |..+ .++..+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD--EESVAALMDTAREE 81 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHh
Confidence 3679999997 9999999999888998 8988887653 2222 2222322 222 2222 1223333333222
Q ss_pred -CCccEEEEcCCcH-------------------HHHHHHHHHhhcCCcEEEEecc
Q 020435 209 -GGADYCFECVGLA-------------------SLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 209 -~g~d~v~d~~g~~-------------------~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+++|+++.+.+.. ..++.+...+... |+++.++.
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS 135 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS 135 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence 2799999877542 2344455555666 88888765
No 184
>PRK06057 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0076 Score=52.59 Aligned_cols=79 Identities=24% Similarity=0.340 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
++.+|||+|+ |.+|..+++.+...|+ +|+++++++++.+.. .+++...+ .|..+ .+.+.+.+.+... +++|+
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD--EDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 4789999997 9999999999999999 999999888776544 33443221 23332 1223333333221 37999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
++.++|.
T Consensus 83 vi~~ag~ 89 (255)
T PRK06057 83 AFNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998863
No 185
>PRK07060 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.011 Score=50.98 Aligned_cols=77 Identities=19% Similarity=0.328 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcEE-EcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~v-i~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
++.+++|+|+ |.+|..+++.+...|. +|++++++.++.+.+.+ .+...+ .|..+ ....+.+.+. .+++|++|
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~---~~~v~~~~~~-~~~~d~vi 82 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD---DAAIRAALAA-AGAFDGLV 82 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC---HHHHHHHHHH-hCCCCEEE
Confidence 4679999997 8999999999999999 89999998877765543 444322 23332 2222222221 13799999
Q ss_pred EcCCc
Q 020435 216 ECVGL 220 (326)
Q Consensus 216 d~~g~ 220 (326)
++.+.
T Consensus 83 ~~ag~ 87 (245)
T PRK07060 83 NCAGI 87 (245)
T ss_pred ECCCC
Confidence 98874
No 186
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.75 E-value=0.033 Score=49.20 Aligned_cols=110 Identities=23% Similarity=0.301 Sum_probs=70.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-E--E--cCCCCCCccHHHHHHHhc-
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--V--NSKNCGDKSVSQIIIDMT- 207 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-v--i--~~~~~~~~~~~~~i~~~~- 207 (326)
.+.+|+|+|| ++||.+++.-.-..|+ +++.+.+..++++.+ ++.+... + + |..+ .++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~--~~~~~~~~~~~~~ 87 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSD--EESVKKFVEWAIR 87 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCC--HHHHHHHHHHHHH
Confidence 4789999998 8999998888888999 888888888877665 3344322 2 2 2222 233333332222
Q ss_pred -CCCccEEEEcCCcH-------------------------HHHHHHHHHhhcCC-cEEEEeccCCCCCccc
Q 020435 208 -DGGADYCFECVGLA-------------------------SLVQEAYACCRKGW-GKTIVLGVDQPGSQLS 251 (326)
Q Consensus 208 -~~g~d~v~d~~g~~-------------------------~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~ 251 (326)
-+++|+.++.+|-. ...+.++..|++.. |+++.++...+....+
T Consensus 88 ~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P 158 (282)
T KOG1205|consen 88 HFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP 158 (282)
T ss_pred hcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence 23999999988741 13445555555543 8999988755433333
No 187
>PLN02366 spermidine synthase
Probab=96.74 E-value=0.02 Score=51.55 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=65.6
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC---------cEEEcCCCCCCccHHHHHHHh
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV---------TEFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g~---------~~vi~~~~~~~~~~~~~i~~~ 206 (326)
...+++|||+|+|. |.++..++++.+..+|.+++.+++-.+.+++. .. -.++. .+..+.+++.
T Consensus 89 ~~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~------~Da~~~l~~~ 161 (308)
T PLN02366 89 IPNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHI------GDGVEFLKNA 161 (308)
T ss_pred CCCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEE------ChHHHHHhhc
Confidence 35678999998766 55677788886655899999888877777662 21 11221 2233334433
Q ss_pred cCCCccEEE-EcCC---------cHHHHHHHHHHhhcCCcEEEEecc
Q 020435 207 TDGGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 207 ~~~g~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.++.+|+|| |+.. ....++.+.+.|+++ |.++..+.
T Consensus 162 ~~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~~ 207 (308)
T PLN02366 162 PEGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQAE 207 (308)
T ss_pred cCCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECcC
Confidence 334899998 5433 234578889999998 99976543
No 188
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.73 E-value=0.025 Score=48.03 Aligned_cols=107 Identities=19% Similarity=0.221 Sum_probs=73.7
Q ss_pred hcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcC
Q 020435 134 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 134 ~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
.++...+.+||=+|.+ +|..++++|..+. -.+++.++.++++.+.+++ .|.+..+..-. ..+..+.+.+...
T Consensus 54 L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~--~gdal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLL--GGDALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEe--cCcHHHHHHhccC
Confidence 3455678899988854 3788888888776 3389999999998887754 56544221111 0245566665334
Q ss_pred CCccEEE-EcCCc--HHHHHHHHHHhhcCCcEEEEeccC
Q 020435 209 GGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 209 ~g~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+.+|.|| |+.-. +..++.+++.|+++ |.++.=...
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNvl 168 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNVL 168 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeecc
Confidence 5999998 76554 55689999999998 887765443
No 189
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.73 E-value=0.0036 Score=55.38 Aligned_cols=99 Identities=19% Similarity=0.307 Sum_probs=62.5
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc---EEEcCCCCCCccHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT---EFVNSKNCGDKSVSQII 203 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~---~vi~~~~~~~~~~~~~i 203 (326)
+.+.+++++|++||-+|+|- |.++..+++..|+ +|+++..|++..+.++ +.|.. .+.. .++.
T Consensus 54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~------~D~~--- 122 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL------QDYR--- 122 (273)
T ss_dssp HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE------S-GG---
T ss_pred HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE------eecc---
Confidence 56788999999999999874 6677788888899 9999999999888764 34521 2221 1121
Q ss_pred HHhcCCCccEEEE-----cCCc---HHHHHHHHHHhhcCCcEEEEecc
Q 020435 204 IDMTDGGADYCFE-----CVGL---ASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 204 ~~~~~~g~d~v~d-----~~g~---~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
++. +.+|.|+. .+|. +..++.+.+.|+|+ |++++-..
T Consensus 123 -~~~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~i 167 (273)
T PF02353_consen 123 -DLP-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQTI 167 (273)
T ss_dssp -G----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEEE
T ss_pred -ccC-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEec
Confidence 111 27999864 3432 34588999999998 99986554
No 190
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.72 E-value=0.017 Score=47.15 Aligned_cols=97 Identities=19% Similarity=0.220 Sum_probs=63.1
Q ss_pred cccccchhhhhhhhhhhhcccCCCCEEEEEccCH-HHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCC
Q 020435 117 ACLLSCGVSTGVGAAWRTANVEVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG 195 (326)
Q Consensus 117 aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Gag~-~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~ 195 (326)
....++...++...+.+...--.+.+|||+|+|. +|..++++++..|+ +|+++.++.+
T Consensus 21 ~~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~-------------------- 79 (168)
T cd01080 21 PGFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK-------------------- 79 (168)
T ss_pred CCccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch--------------------
Confidence 3445544343433222332234789999999986 59989999999999 8888876521
Q ss_pred CccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 196 DKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 196 ~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
++.+.+. .+|+||.+++.++.+.. ..++++ -.++.++..
T Consensus 80 --~l~~~l~-----~aDiVIsat~~~~ii~~--~~~~~~-~viIDla~p 118 (168)
T cd01080 80 --NLKEHTK-----QADIVIVAVGKPGLVKG--DMVKPG-AVVIDVGIN 118 (168)
T ss_pred --hHHHHHh-----hCCEEEEcCCCCceecH--HHccCC-eEEEEccCC
Confidence 1222222 48999999999874433 346776 777777764
No 191
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.71 E-value=0.009 Score=57.59 Aligned_cols=74 Identities=23% Similarity=0.252 Sum_probs=54.6
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
+.++++|+|+|.|.+|++++++++..|+ +|++.+..+++.+.+++.|+.. +.... ..+.+. .+|+|+.
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA-----DYALVVT 76 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh-----cCCEEEE
Confidence 4568899999999999999999999999 9999997766666677778743 32211 111221 4799999
Q ss_pred cCCcHH
Q 020435 217 CVGLAS 222 (326)
Q Consensus 217 ~~g~~~ 222 (326)
+.|-+.
T Consensus 77 SpGi~~ 82 (488)
T PRK03369 77 SPGFRP 82 (488)
T ss_pred CCCCCC
Confidence 888643
No 192
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=96.71 E-value=0.027 Score=48.59 Aligned_cols=107 Identities=21% Similarity=0.361 Sum_probs=74.0
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcC
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
....+.+|++||=+|+|. |-.+..+++..|..+|++++.+++.++.+++ .+... +..-. .+ ++.+. ..+
T Consensus 45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~---~d-Ae~LP-f~D 117 (238)
T COG2226 45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV---GD-AENLP-FPD 117 (238)
T ss_pred HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE---ec-hhhCC-CCC
Confidence 445566899999997765 8999999999886699999999999888764 22221 11101 11 11111 222
Q ss_pred CCccEEEEcCCc------HHHHHHHHHHhhcCCcEEEEeccCCCC
Q 020435 209 GGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQPG 247 (326)
Q Consensus 209 ~g~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~~ 247 (326)
..||+|.-+.|- +.++.++.+.|+|+ |+++.+....+.
T Consensus 118 ~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~p~ 161 (238)
T COG2226 118 NSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSKPD 161 (238)
T ss_pred CccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCCCC
Confidence 389999766653 44688999999998 999999876543
No 193
>PRK12939 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.034 Score=48.04 Aligned_cols=79 Identities=20% Similarity=0.241 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.++||+|+ |.+|..++..+...|+ +|+++++++++.+.+ +..+.. .++ |..+ .+++.+.+.+...
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 82 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD--PASVQRFFDAAAAAL 82 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4689999987 9999999999988999 899999887765543 223322 222 2222 1222222222211
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (250)
T PRK12939 83 GGLDGLVNNAGI 94 (250)
T ss_pred CCCCEEEECCCC
Confidence 379999999875
No 194
>PRK14967 putative methyltransferase; Provisional
Probab=96.68 E-value=0.12 Score=44.25 Aligned_cols=98 Identities=18% Similarity=0.197 Sum_probs=64.2
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHHhc
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~i~~~~ 207 (326)
....++++++||-.|+|. |..+..+++. +..+|++++.+++..+.++. .+.. .+++ .++.+. ..
T Consensus 30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~------~d~~~~---~~ 98 (223)
T PRK14967 30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR------GDWARA---VE 98 (223)
T ss_pred HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE------Cchhhh---cc
Confidence 345577889999999987 8888888875 54489999999988776543 3332 2222 122221 12
Q ss_pred CCCccEEEEcCCc---------------------------HHHHHHHHHHhhcCCcEEEEec
Q 020435 208 DGGADYCFECVGL---------------------------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 208 ~~g~d~v~d~~g~---------------------------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.+.+|+|+...+- ...+..+.+.|+++ |+++++.
T Consensus 99 ~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~ 159 (223)
T PRK14967 99 FRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ 159 (223)
T ss_pred CCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence 2389999864210 12345678899998 9988763
No 195
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=96.67 E-value=0.015 Score=50.00 Aligned_cols=105 Identities=21% Similarity=0.258 Sum_probs=75.3
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIID 205 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~ 205 (326)
+...+++.+|++|+=.|.|+ |.+.+.||++.|. ++|+..+..++..+.+++ +|....+.... .+. .+
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~---~Dv----~~ 157 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL---GDV----RE 157 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe---ccc----cc
Confidence 34568899999999888766 8888889998765 599999998888776643 44322222111 222 22
Q ss_pred hcCC-CccEEE-EcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 206 MTDG-GADYCF-ECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 206 ~~~~-g~d~v~-d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
...+ .+|.|| |-..--..++.+.+.|+++ |.++.+...
T Consensus 158 ~~~~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P~ 197 (256)
T COG2519 158 GIDEEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSPT 197 (256)
T ss_pred cccccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcCC
Confidence 2223 799987 7777667789999999998 999998643
No 196
>PRK12829 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0087 Score=52.33 Aligned_cols=81 Identities=23% Similarity=0.287 Sum_probs=53.4
Q ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc--EEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 138 EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT--EFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 138 ~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~--~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
-++.++||+|+ |.+|..+++.+...|. +|+.+.++++..+.+.+ .... .++ |..+ ..++.+.+.+... +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD--PAQVERVFDTAVERFG 85 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 46789999987 9999999999999999 89999998776665443 2211 222 2222 1222222322211 3
Q ss_pred CccEEEEcCCcH
Q 020435 210 GADYCFECVGLA 221 (326)
Q Consensus 210 g~d~v~d~~g~~ 221 (326)
++|+||.+.+..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999988753
No 197
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.66 E-value=0.0052 Score=52.41 Aligned_cols=100 Identities=18% Similarity=0.247 Sum_probs=67.1
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCcE--EEcCCCCCCccHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 203 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i 203 (326)
+.+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ .|.+. ++..+. .+.
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~------~~~- 140 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDG------TQG- 140 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCc------ccC-
Confidence 55667889999999998866 6666777777653 269999999887776643 44332 222211 110
Q ss_pred HHhcC-CCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 204 IDMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 204 ~~~~~-~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
... +.||+|+-............+.|+++ |+++..
T Consensus 141 --~~~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~ 176 (215)
T TIGR00080 141 --WEPLAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP 176 (215)
T ss_pred --CcccCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence 111 27999985544455467888999998 998765
No 198
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.013 Score=52.57 Aligned_cols=81 Identities=23% Similarity=0.299 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHHhc--CCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi~~~~~~~~~~~~~i~~~~--~~g 210 (326)
.+.++||+|+ |++|.++++.+...|+ +|++++++.++.+.+. ..+.+ ..+..+-.+.+++.+.+.+.. -++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999999988899 9999999987765442 22322 222222101122333333221 137
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++++|+|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 199
>PRK05872 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=52.99 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=53.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC--CcE-E--EcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG--VTE-F--VNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g--~~~-v--i~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ ++++ .+. . .|..+ .++..+.+.+... +
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g 84 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD--LAAMQAAAEEAVERFG 84 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 4789999987 9999999999999999 999999988876654 3344 211 1 23322 1223333333322 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++++++|.
T Consensus 85 ~id~vI~nAG~ 95 (296)
T PRK05872 85 GIDVVVANAGI 95 (296)
T ss_pred CCCEEEECCCc
Confidence 79999999884
No 200
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=51.89 Aligned_cols=78 Identities=23% Similarity=0.233 Sum_probs=52.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHHhcC--CCccE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~~vi--~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+ +.++..+++ |..+ .+++.+.+.+... +++|+
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 81 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD--PASFAAFLDAVEADLGPIDV 81 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 579999997 9999999998888899 899999988877654 334411222 3322 2333333333321 38999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
+++++|.
T Consensus 82 li~~ag~ 88 (273)
T PRK07825 82 LVNNAGV 88 (273)
T ss_pred EEECCCc
Confidence 9999874
No 201
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.64 E-value=0.012 Score=51.64 Aligned_cols=79 Identities=24% Similarity=0.287 Sum_probs=53.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-EEE--cCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+.+ ++.. ..+ |..+ .++..+.+.+... +.+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTS--YADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCC--HHHHHHHHHHHHHhcCCC
Confidence 4679999987 8999999999999999 89999998887766543 3321 222 2222 1233333333322 379
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++++++|.
T Consensus 82 d~li~~ag~ 90 (263)
T PRK06200 82 DCFVGNAGI 90 (263)
T ss_pred CEEEECCCC
Confidence 999998873
No 202
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.62 E-value=0.059 Score=45.16 Aligned_cols=103 Identities=20% Similarity=0.358 Sum_probs=64.0
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCcE--EEcCCCCCCccHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 203 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~-g~~~V~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i 203 (326)
+....+++++++||=.|+|. |..++.+++.. +. +|++++.+++..+.+++ ++... ++.. +..+.+
T Consensus 32 l~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~-~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~------d~~~~~ 103 (196)
T PRK07402 32 LISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKG-RVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG------SAPECL 103 (196)
T ss_pred HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC------chHHHH
Confidence 45566778899999888754 44555566654 44 99999999988777653 45432 3322 222222
Q ss_pred HHhcCCCccEE-EEcCCc-HHHHHHHHHHhhcCCcEEEEecc
Q 020435 204 IDMTDGGADYC-FECVGL-ASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 204 ~~~~~~g~d~v-~d~~g~-~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
..+. ..+|.+ ++.... ...++.+.+.|+++ |.++....
T Consensus 104 ~~~~-~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~ 143 (196)
T PRK07402 104 AQLA-PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS 143 (196)
T ss_pred hhCC-CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence 2222 233444 443322 35578889999998 99988754
No 203
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.013 Score=51.45 Aligned_cols=79 Identities=16% Similarity=0.189 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+. ..+.. +++ |..+ .+.+.+.+.+...
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH--PEATAGLAGQAVEAF 85 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 8999999999988999 9999999887655432 22321 222 3222 1222222333221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|++++.
T Consensus 86 ~~id~vi~~Ag~ 97 (263)
T PRK07814 86 GRLDIVVNNVGG 97 (263)
T ss_pred CCCCEEEECCCC
Confidence 379999998873
No 204
>PRK00811 spermidine synthase; Provisional
Probab=96.60 E-value=0.015 Score=51.80 Aligned_cols=96 Identities=15% Similarity=0.215 Sum_probs=64.1
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-C-----C--c---EEEcCCCCCCccHHHHHHHh
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-G-----V--T---EFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g-----~--~---~vi~~~~~~~~~~~~~i~~~ 206 (326)
..+++||++|+|. |..+..+++..+..+|++++.+++-.+.+++. . . + +++. .+..+.+..
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~------~Da~~~l~~- 146 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI------GDGIKFVAE- 146 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE------CchHHHHhh-
Confidence 3578999998866 66677777776666899999999888877652 1 1 1 1222 223333433
Q ss_pred cCCCccEEE-EcCC---------cHHHHHHHHHHhhcCCcEEEEec
Q 020435 207 TDGGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 207 ~~~g~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
..+.+|+|+ |+.. ....++.+.+.|+++ |.++...
T Consensus 147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~ 191 (283)
T PRK00811 147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS 191 (283)
T ss_pred CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence 334899998 4321 134467888999998 9988753
No 205
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.58 E-value=0.037 Score=46.07 Aligned_cols=96 Identities=18% Similarity=0.226 Sum_probs=61.7
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcCCCc
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~-g~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
++++.+||-.|+|. |..+..+++.. +. +|++++.+++..+.+++ .+.+.+ .... .+..+ +.. .+.+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~-~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~---~d~~~-~~~--~~~f 113 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPEL-KVTLVDSLGKKIAFLREVAAELGLKNV-TVVH---GRAEE-FGQ--EEKF 113 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCC-eEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEe---ccHhh-CCC--CCCc
Confidence 45589999998765 56566666554 45 99999999987776653 444322 1111 22221 111 2389
Q ss_pred cEEEEc-CCc-HHHHHHHHHHhhcCCcEEEEec
Q 020435 212 DYCFEC-VGL-ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 212 d~v~d~-~g~-~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+|+.. ... +..+..+.+.|+++ |.++.+-
T Consensus 114 DlV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~ 145 (187)
T PRK00107 114 DVVTSRAVASLSDLVELCLPLLKPG-GRFLALK 145 (187)
T ss_pred cEEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence 999953 322 34577889999998 9998874
No 206
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.57 E-value=0.014 Score=51.16 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=52.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCc-EEE--cCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.+++|+|+ |++|..+++.+...|+ +|++++++.++.+.+.+. +.. +.+ |..+ ..+..+.+.+... +.+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS--LDDHKEAVARCVAAFGKI 80 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 4689999987 8999999999989999 999999988777665542 321 122 2222 1223333433322 379
Q ss_pred cEEEEcCC
Q 020435 212 DYCFECVG 219 (326)
Q Consensus 212 d~v~d~~g 219 (326)
|+++++.|
T Consensus 81 d~li~~Ag 88 (262)
T TIGR03325 81 DCLIPNAG 88 (262)
T ss_pred CEEEECCC
Confidence 99999886
No 207
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.013 Score=51.11 Aligned_cols=81 Identities=22% Similarity=0.241 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--EEEcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFVNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~--~vi~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++++..+...++... ..+..+-...+++.+.+.+... +++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999997 9999999999988999 899999987765544443211 1222221012223333333222 27999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9998874
No 208
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.56 E-value=0.013 Score=54.92 Aligned_cols=75 Identities=16% Similarity=0.116 Sum_probs=54.5
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
-.+.+|||+|+|.+|.+++..+...|+.+++++.|+.++.+.+ ..++...++..+ .+.+.. ..+|+||+
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---------~l~~~l-~~aDiVI~ 248 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---------ELPQLI-KKADIIIA 248 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---------HHHHHh-ccCCEEEE
Confidence 3578999999999999999999999977899999998876654 445522233221 122211 15999999
Q ss_pred cCCcHH
Q 020435 217 CVGLAS 222 (326)
Q Consensus 217 ~~g~~~ 222 (326)
|.+.++
T Consensus 249 aT~a~~ 254 (414)
T PRK13940 249 AVNVLE 254 (414)
T ss_pred CcCCCC
Confidence 999877
No 209
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.02 Score=50.07 Aligned_cols=83 Identities=23% Similarity=0.277 Sum_probs=51.3
Q ss_pred cCCCCEEEEEcc-CHHHHHHHHHHHHc-CCCEEEEEcCChhH-HHH----HHhcCC--cEEEcCCCCCCccHHHHHHHhc
Q 020435 137 VEVGSTVVIFGL-GSIGLAVAEGARLC-GATRIIGVDVISEK-FEI----GKRFGV--TEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 137 ~~~~~~vlI~Ga-g~~G~~a~~la~~~-g~~~V~~~~~~~~~-~~~----~~~~g~--~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
+..+.+|||+|+ |++|..+++.+... |+ +|+++++++++ .+. ++..+. -+++..+-.+..+..+.+.+..
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 456789999987 99999999877666 57 99999988765 332 333332 1233222101223333344333
Q ss_pred C-CCccEEEEcCCc
Q 020435 208 D-GGADYCFECVGL 220 (326)
Q Consensus 208 ~-~g~d~v~d~~g~ 220 (326)
. +++|+++++.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 489999987764
No 210
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.55 E-value=0.014 Score=51.62 Aligned_cols=98 Identities=19% Similarity=0.247 Sum_probs=72.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCc-EEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g~~-~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
++.+|.|+|+|.+|.-++++|.-+|+ +|+.++.+.+++..+..+ +.+ +..-... .++.+.+. +.|++|.
T Consensus 167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~---~~iee~v~-----~aDlvIg 237 (371)
T COG0686 167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTP---SNIEEAVK-----KADLVIG 237 (371)
T ss_pred CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCH---HHHHHHhh-----hccEEEE
Confidence 35688899999999999999999999 999999999999888774 332 2222222 34444443 4899987
Q ss_pred cCCcH------HHHHHHHHHhhcCCcEEEEeccCCC
Q 020435 217 CVGLA------SLVQEAYACCRKGWGKTIVLGVDQP 246 (326)
Q Consensus 217 ~~g~~------~~~~~~~~~l~~~~G~~v~~g~~~~ 246 (326)
++=-+ -..++.++.++|+ +.+|.+....+
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpG-sVivDVAiDqG 272 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPG-SVIVDVAIDQG 272 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCC-cEEEEEEEcCC
Confidence 54321 2367889999998 99999987543
No 211
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.54 E-value=0.019 Score=49.71 Aligned_cols=81 Identities=16% Similarity=0.263 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCc-EEEcCCCCCCccHHHHHHHhcC--CCcc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD 212 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~--~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d 212 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++... .+.+++.+.. ..+..+-.+.+++.+.+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999997 8999999999998999 89999886522 2334444432 2222111012333333333322 3799
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
No 212
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.54 E-value=0.015 Score=50.72 Aligned_cols=79 Identities=22% Similarity=0.223 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EE--EcCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |++|..+++.+...|+ +|+.++++.++.+.+. ..+.+ .. .|..+ .+++.+.+.+...
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 84 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ--HQQVTSMLDQVTAEL 84 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4789999987 8999999999999999 9999999887765442 22322 12 22222 1233333333221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++++.|.
T Consensus 85 g~id~lv~~ag~ 96 (253)
T PRK05867 85 GGIDIAVCNAGI 96 (253)
T ss_pred CCCCEEEECCCC
Confidence 389999998874
No 213
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.53 E-value=0.035 Score=52.89 Aligned_cols=79 Identities=25% Similarity=0.406 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHH-HHhcCCcE-EEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEI-GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~--~~~~~-~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.++||+|+ |++|..+++.+...|+ +|+++++.+ ++.+. ..+++... ..|..+ .+...+.+..... +++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA--PDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC--HHHHHHHHHHHHHhCCCC
Confidence 4789999987 9999999999999999 899888743 22222 23455432 234333 1222222222221 279
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++|++.|.
T Consensus 286 d~vi~~AG~ 294 (450)
T PRK08261 286 DIVVHNAGI 294 (450)
T ss_pred CEEEECCCc
Confidence 999999883
No 214
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.52 E-value=0.015 Score=50.31 Aligned_cols=81 Identities=20% Similarity=0.207 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC--Cc-EEEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG--VT-EFVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g--~~-~vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
.+.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+. .+. .. +.+..+-.+..++.+.+.+... +++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3579999997 9999999999988899 8999999987765542 222 11 1222111012233333333211 279
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++|.+.+.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999998874
No 215
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.018 Score=50.08 Aligned_cols=73 Identities=16% Similarity=0.175 Sum_probs=50.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHHhcCCCc
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~v--i~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+++ .+.. .+ .|..+ .+.+.+...+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~------~~~~~~~~~~~i 74 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD------AIDRAQAAEWDV 74 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC------HHHHHHHhcCCC
Confidence 458999987 9999999999999999 99999988776555432 2321 12 23222 223444433489
Q ss_pred cEEEEcCC
Q 020435 212 DYCFECVG 219 (326)
Q Consensus 212 d~v~d~~g 219 (326)
|++|++.+
T Consensus 75 d~vi~~ag 82 (257)
T PRK09291 75 DVLLNNAG 82 (257)
T ss_pred CEEEECCC
Confidence 99999887
No 216
>PRK07831 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.017 Score=50.65 Aligned_cols=81 Identities=25% Similarity=0.362 Sum_probs=52.6
Q ss_pred cCCCCEEEEEcc-C-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----h-cCCcEE--E--cCCCCCCccHHHHHHH
Q 020435 137 VEVGSTVVIFGL-G-SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----R-FGVTEF--V--NSKNCGDKSVSQIIID 205 (326)
Q Consensus 137 ~~~~~~vlI~Ga-g-~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~-~g~~~v--i--~~~~~~~~~~~~~i~~ 205 (326)
+..+.++||+|+ | ++|.++++.+...|+ +|+++++++++.+... + ++...+ + |..+ .+++.+.+.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~ 90 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS--EAQVDALIDA 90 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC--HHHHHHHHHH
Confidence 345789999986 6 799999999999999 8999998877655432 2 343222 2 2222 1223333332
Q ss_pred hcC--CCccEEEEcCCc
Q 020435 206 MTD--GGADYCFECVGL 220 (326)
Q Consensus 206 ~~~--~g~d~v~d~~g~ 220 (326)
... +++|++|++.|.
T Consensus 91 ~~~~~g~id~li~~ag~ 107 (262)
T PRK07831 91 AVERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHHcCCCCEEEECCCC
Confidence 221 379999999984
No 217
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.51 E-value=0.01 Score=48.59 Aligned_cols=103 Identities=18% Similarity=0.201 Sum_probs=63.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcC-CCC-C------------CccHHHHHH
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNS-KNC-G------------DKSVSQIII 204 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~-~~~-~------------~~~~~~~i~ 204 (326)
++.+|+|+|+|.+|+.|+++++.+|+ +|+..+...++.+..+..+...+... .+. . .......+.
T Consensus 19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 97 (168)
T PF01262_consen 19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA 97 (168)
T ss_dssp -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence 45799999999999999999999999 99999999888888877776433221 100 0 011222222
Q ss_pred HhcCCCccEEEEc-CC-c---HH-HHHHHHHHhhcCCcEEEEeccC
Q 020435 205 DMTDGGADYCFEC-VG-L---AS-LVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 205 ~~~~~g~d~v~d~-~g-~---~~-~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+... .+|++|.+ .- + +. .....++.|+++ ..++.++..
T Consensus 98 ~~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D 141 (168)
T PF01262_consen 98 EFIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD 141 (168)
T ss_dssp HHHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred HHHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence 2211 47888742 21 1 11 134667788887 778887654
No 218
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.016 Score=51.25 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=53.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--EEE--cCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFV--NSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~--~vi--~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.+.... ..+ |..+ .+.+.+.+.+... +++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d--~~~~~~~~~~~~~~~~~~ 79 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD--FDAIDAVVADAEATFGPI 79 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3578999987 9999999999988999 899999998887665543211 122 3222 1223333333222 269
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++++++|.
T Consensus 80 d~vv~~ag~ 88 (277)
T PRK06180 80 DVLVNNAGY 88 (277)
T ss_pred CEEEECCCc
Confidence 999999885
No 219
>PRK06196 oxidoreductase; Provisional
Probab=96.45 E-value=0.02 Score=51.82 Aligned_cols=79 Identities=19% Similarity=0.212 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHHhcC--CCcc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD--GGAD 212 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~~vi--~~~~~~~~~~~~~i~~~~~--~g~d 212 (326)
.+.+|||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ .++..-+.+ |..+ ..++.+.+.+... +++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d--~~~v~~~~~~~~~~~~~iD 101 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD--LESVRAFAERFLDSGRRID 101 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC--HHHHHHHHHHHHhcCCCCC
Confidence 4679999987 8999999998888999 899999988776543 223211222 2222 1223333333322 3899
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
++++++|.
T Consensus 102 ~li~nAg~ 109 (315)
T PRK06196 102 ILINNAGV 109 (315)
T ss_pred EEEECCCC
Confidence 99998873
No 220
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=96.44 E-value=0.014 Score=49.11 Aligned_cols=99 Identities=16% Similarity=0.221 Sum_probs=62.8
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHh-
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM- 206 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~- 206 (326)
.+.....++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++ .+...+ .... .++ .+.
T Consensus 23 ~~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~---~d~----~~~~ 91 (197)
T PRK11207 23 LEAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV---VDL----NNLT 91 (197)
T ss_pred HHhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe---cCh----hhCC
Confidence 3444555678999999876 7777777775 77 99999999987776654 222211 1110 111 111
Q ss_pred cCCCccEEEEcCC----c----HHHHHHHHHHhhcCCcEEEEec
Q 020435 207 TDGGADYCFECVG----L----ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 207 ~~~g~d~v~d~~g----~----~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.++.+|+|+.... . ...+..+.+.|+++ |.++.+.
T Consensus 92 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~~ 134 (197)
T PRK11207 92 FDGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIVA 134 (197)
T ss_pred cCCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence 1237999986533 1 24477888899998 9965544
No 221
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.018 Score=50.50 Aligned_cols=79 Identities=23% Similarity=0.293 Sum_probs=52.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----c-CCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----F-GVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-----~-g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ . +.. +.+ |..+ .++..+.+.+...
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~ 83 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD--EADVAAFAAAVEA 83 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC--HHHHHHHHHHHHH
Confidence 4689999987 8999999999999999 89999998877654321 1 111 122 3222 1233333333322
Q ss_pred --CCccEEEEcCCc
Q 020435 209 --GGADYCFECVGL 220 (326)
Q Consensus 209 --~g~d~v~d~~g~ 220 (326)
+++|++++++|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (265)
T PRK07062 84 RFGGVDMLVNNAGQ 97 (265)
T ss_pred hcCCCCEEEECCCC
Confidence 379999999874
No 222
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.42 E-value=0.019 Score=50.85 Aligned_cols=79 Identities=18% Similarity=0.232 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcEEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g--~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
++.++||+|+ + +||.++++.+...|+ +|+.+.++++..+.+ ++.|....+ |..+ .++..+.+.+...
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d--~~~v~~~~~~~~~~ 82 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED--IASVDAVFEALEKK 82 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC--HHHHHHHHHHHHHH
Confidence 4678999987 4 899999999999999 899888765332222 234533332 2222 2223333333322
Q ss_pred -CCccEEEEcCCc
Q 020435 209 -GGADYCFECVGL 220 (326)
Q Consensus 209 -~g~d~v~d~~g~ 220 (326)
+.+|++++++|.
T Consensus 83 ~g~iD~lVnnAG~ 95 (271)
T PRK06505 83 WGKLDFVVHAIGF 95 (271)
T ss_pred hCCCCEEEECCcc
Confidence 389999998873
No 223
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.019 Score=49.18 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH----HHhcCCcEE-EcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~----~~~~g~~~v-i~~~~~~~~~~~~~i~~~~~--~g 210 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+. ++..+...+ .|..+ .+++.+.+.+... ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD--PQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC--HHHHHHHHHHHHHHhCC
Confidence 3689999987 9999999999988899 89999987765332 222333221 22222 1223333333222 27
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++++.+.
T Consensus 83 ~d~vi~~ag~ 92 (239)
T PRK12828 83 LDALVNIAGA 92 (239)
T ss_pred cCEEEECCcc
Confidence 9999998763
No 224
>PRK08339 short chain dehydrogenase; Provisional
Probab=96.42 E-value=0.025 Score=49.77 Aligned_cols=79 Identities=18% Similarity=0.306 Sum_probs=52.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCc-EEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVT-EFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~----g~~-~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ + +.+ ..+ |..+ ..+..+.+.+...
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 83 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK--REDLERTVKELKNI 83 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHHHhh
Confidence 4779999987 8999999999999999 89999998877654432 1 321 222 3222 2233333333321
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++++.|.
T Consensus 84 g~iD~lv~nag~ 95 (263)
T PRK08339 84 GEPDIFFFSTGG 95 (263)
T ss_pred CCCcEEEECCCC
Confidence 379999998874
No 225
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.018 Score=50.16 Aligned_cols=80 Identities=21% Similarity=0.205 Sum_probs=51.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~-~~vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+. .+.+..+-.+.+++.+.+.+... +++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999987 8999999999999999 99999998876554432 232 12332221011233333333321 379
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|+++++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999998873
No 226
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.023 Score=49.15 Aligned_cols=79 Identities=22% Similarity=0.283 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+ ++++.. +.+ |..+ ..+..+.+..... +++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD--VAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC--HHHHHHHHHHHHHHhCCC
Confidence 4679999987 9999999999999999 999999887765543 345532 222 2222 1222222222221 379
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|+++++++.
T Consensus 82 d~vi~~ag~ 90 (249)
T PRK06500 82 DAVFINAGV 90 (249)
T ss_pred CEEEECCCC
Confidence 999998874
No 227
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.071 Score=46.97 Aligned_cols=76 Identities=21% Similarity=0.291 Sum_probs=48.8
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc--E--EEcCCCCCCccHHHHHHHhcC--CC
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--E--FVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~--~--vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
+++|+|+ |++|..+++.+...|+ +|+.+++++++.+.+ +..+.. . ..|..+ .+...+.+.+... ++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD--YDAVAAFAADIHAAHGS 78 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC--HHHHHHHHHHHHHhcCC
Confidence 6899987 9999999999988999 899999887765433 223332 1 133333 1222222222221 37
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++++.|.
T Consensus 79 id~lv~~ag~ 88 (272)
T PRK07832 79 MDVVMNIAGI 88 (272)
T ss_pred CCEEEECCCC
Confidence 9999999874
No 228
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.39 E-value=0.017 Score=51.55 Aligned_cols=96 Identities=23% Similarity=0.346 Sum_probs=59.1
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC-cEEEcCCCCCCccHHHHHHHhcCCCc
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV-TEFVNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~-~~vi~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
..+|++||=+|+|+ |.+++..+ .+|+++|++++.++...+.+++ -|. +.+..... .+. ..+.+
T Consensus 159 ~~~g~~vLDvG~GS-GILaiaA~-klGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~---~~~-------~~~~~ 226 (295)
T PF06325_consen 159 VKPGKRVLDVGCGS-GILAIAAA-KLGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLS---EDL-------VEGKF 226 (295)
T ss_dssp SSTTSEEEEES-TT-SHHHHHHH-HTTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCT---SCT-------CCS-E
T ss_pred ccCCCEEEEeCCcH-HHHHHHHH-HcCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEe---ccc-------ccccC
Confidence 56789999998654 44444333 3588899999999987766543 232 22211111 111 11489
Q ss_pred cEEEEcCCcHHH---HHHHHHHhhcCCcEEEEeccCC
Q 020435 212 DYCFECVGLASL---VQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 212 d~v~d~~g~~~~---~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+|+-..-.... .+...+.++++ |.+++.|...
T Consensus 227 dlvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~ 262 (295)
T PF06325_consen 227 DLVVANILADVLLELAPDIASLLKPG-GYLILSGILE 262 (295)
T ss_dssp EEEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred CEEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence 999977766552 33456688998 9999998753
No 229
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.022 Score=49.56 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ..+.+ ..+ |..+ .++..+.+.+...
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD--EAYAKALVALAVERF 81 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 3679999987 8999999999988999 8999999887765442 23422 222 2222 1222333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++++++|.
T Consensus 82 ~~id~li~~ag~ 93 (254)
T PRK07478 82 GGLDIAFNNAGT 93 (254)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 230
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.38 E-value=0.032 Score=50.35 Aligned_cols=91 Identities=25% Similarity=0.416 Sum_probs=61.3
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
.+|.|+|+|.+|...++.++..|. .+|++.++++++.+.+++.|....+. .+..+.+ ..+|+||.|+.
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~------~~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT------TSAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec------CCHHHHh-----cCCCEEEECCC
Confidence 589999999999999998888773 27999999999888888777522111 1111111 26899999998
Q ss_pred cHHH---HHHHHHHhhcCCcEEEEecc
Q 020435 220 LASL---VQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 220 ~~~~---~~~~~~~l~~~~G~~v~~g~ 243 (326)
.... +......++++ ..++.++.
T Consensus 76 ~~~~~~v~~~l~~~l~~~-~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPG-AIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence 7542 22333455665 65655543
No 231
>PRK04148 hypothetical protein; Provisional
Probab=96.36 E-value=0.072 Score=41.57 Aligned_cols=89 Identities=19% Similarity=0.257 Sum_probs=60.5
Q ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 136 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 136 ~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
...++.+++++|.| .|..+++.+...|. .|++++.+++..+.+++.+...+.+.-- +.++ .+- +++|+|.
T Consensus 13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf--~p~~--~~y----~~a~liy 82 (134)
T PRK04148 13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLF--NPNL--EIY----KNAKLIY 82 (134)
T ss_pred ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCC--CCCH--HHH----hcCCEEE
Confidence 33456899999998 78755666667898 9999999999999998887644432111 0111 111 1799999
Q ss_pred EcCCcHHHHHHHHHHhhcC
Q 020435 216 ECVGLASLVQEAYACCRKG 234 (326)
Q Consensus 216 d~~g~~~~~~~~~~~l~~~ 234 (326)
.+-..++.....+++-++-
T Consensus 83 sirpp~el~~~~~~la~~~ 101 (134)
T PRK04148 83 SIRPPRDLQPFILELAKKI 101 (134)
T ss_pred EeCCCHHHHHHHHHHHHHc
Confidence 9999888444555554443
No 232
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.031 Score=47.59 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=52.4
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-EEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.++..+.. ...|..+ ..++.+.+.+..++++|+++.+.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD--PASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC--HHHHHHHHHHhcCCCCCEEEECC
Confidence 47899987 9999999998888898 899999998887777666543 2223332 12222222233323799999887
Q ss_pred Cc
Q 020435 219 GL 220 (326)
Q Consensus 219 g~ 220 (326)
|.
T Consensus 79 g~ 80 (222)
T PRK06953 79 GV 80 (222)
T ss_pred Cc
Confidence 65
No 233
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.34 E-value=0.022 Score=51.71 Aligned_cols=80 Identities=18% Similarity=0.183 Sum_probs=53.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cC-Cc-E--EEcCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FG-VT-E--FVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-----~g-~~-~--vi~~~~~~~~~~~~~i~~~~~ 208 (326)
.|.+++|+|+ +++|.++++.+...|+ +|+.+++++++.+.+.+ .+ .. + ..|..+ ...+..+.+.+..+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~l~~~~~ 129 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG-DIDEGVKRIKETIE 129 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC-CcHHHHHHHHHHhc
Confidence 4789999997 8999999988888899 89999999988765422 22 11 1 223322 01233444555555
Q ss_pred C-CccEEEEcCCc
Q 020435 209 G-GADYCFECVGL 220 (326)
Q Consensus 209 ~-g~d~v~d~~g~ 220 (326)
+ .+|++++++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 5 67799988763
No 234
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.31 E-value=0.027 Score=49.49 Aligned_cols=78 Identities=22% Similarity=0.294 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. ...+.. +++ |..+ ..++.+.+.+...
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~~ 84 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD--YAAVEAAFAQIADEF 84 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHc
Confidence 5789999987 9999999999989999 899999887765433 222322 222 3222 2233333444322
Q ss_pred CCccEEEEcCC
Q 020435 209 GGADYCFECVG 219 (326)
Q Consensus 209 ~g~d~v~d~~g 219 (326)
+++|++|.+.+
T Consensus 85 ~~iD~vi~~ag 95 (264)
T PRK07576 85 GPIDVLVSGAA 95 (264)
T ss_pred CCCCEEEECCC
Confidence 27999998875
No 235
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.29 E-value=0.036 Score=44.67 Aligned_cols=102 Identities=18% Similarity=0.254 Sum_probs=63.7
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
.-.|.+++|.|-|.+|.-+++.++.+|+ +|++++.++-+.-++.--|.. +. .+.+.+ ...|+++.
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~--------~~~~a~-----~~adi~vt 84 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM--------TLEEAL-----RDADIFVT 84 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE---------HHHHT-----TT-SEEEE
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec--------CHHHHH-----hhCCEEEE
Confidence 4478999999999999999999999999 999999998777666555653 22 222222 25899999
Q ss_pred cCCcHHH-HHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHH
Q 020435 217 CVGLASL-VQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVL 258 (326)
Q Consensus 217 ~~g~~~~-~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~ 258 (326)
+.|.... -...+..|+++ ..+...|. ....++...+.
T Consensus 85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh----~d~Eid~~~L~ 122 (162)
T PF00670_consen 85 ATGNKDVITGEHFRQMKDG-AILANAGH----FDVEIDVDALE 122 (162)
T ss_dssp -SSSSSSB-HHHHHHS-TT-EEEEESSS----STTSBTHHHHH
T ss_pred CCCCccccCHHHHHHhcCC-eEEeccCc----CceeEeecccc
Confidence 9998663 35778889986 44444432 33455554433
No 236
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.29 E-value=0.09 Score=42.69 Aligned_cols=89 Identities=25% Similarity=0.246 Sum_probs=60.1
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCc
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGL 220 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~ 220 (326)
.+|-++|.|.+|...++-+...|. +|++.++++++.+.+.+.|+. .. .+..+.+.+ .|+||-|..+
T Consensus 2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~-~~-------~s~~e~~~~-----~dvvi~~v~~ 67 (163)
T PF03446_consen 2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAE-VA-------DSPAEAAEQ-----ADVVILCVPD 67 (163)
T ss_dssp BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEE-EE-------SSHHHHHHH-----BSEEEE-SSS
T ss_pred CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhh-hh-------hhhhhHhhc-----ccceEeeccc
Confidence 378899999999999998888999 999999999999988887753 22 233333333 6999998888
Q ss_pred HHHHHHHH------HHhhcCCcEEEEeccC
Q 020435 221 ASLVQEAY------ACCRKGWGKTIVLGVD 244 (326)
Q Consensus 221 ~~~~~~~~------~~l~~~~G~~v~~g~~ 244 (326)
.......+ ..+.++ ..++.++..
T Consensus 68 ~~~v~~v~~~~~i~~~l~~g-~iiid~sT~ 96 (163)
T PF03446_consen 68 DDAVEAVLFGENILAGLRPG-KIIIDMSTI 96 (163)
T ss_dssp HHHHHHHHHCTTHGGGS-TT-EEEEE-SS-
T ss_pred chhhhhhhhhhHHhhccccc-eEEEecCCc
Confidence 65455443 335565 666666543
No 237
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.28 E-value=0.028 Score=49.16 Aligned_cols=78 Identities=21% Similarity=0.253 Sum_probs=50.0
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCcEEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
++||+|+ +++|.++++.+...|+ +|+.+++++++.+.+. +.+..+.+..+-.+.++..+.+.+... +++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899987 8999999999988999 8999999887654432 223222332221011233333333322 389999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
+++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 998874
No 238
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.28 E-value=0.031 Score=48.34 Aligned_cols=80 Identities=21% Similarity=0.267 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..+.. +.+..+-....+..+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999987 9999999999998999 899999887765443 223432 2222211001233333333322 37
Q ss_pred ccEEEEcCC
Q 020435 211 ADYCFECVG 219 (326)
Q Consensus 211 ~d~v~d~~g 219 (326)
+|.+|+++|
T Consensus 83 id~vi~~ag 91 (253)
T PRK08217 83 LNGLINNAG 91 (253)
T ss_pred CCEEEECCC
Confidence 899999887
No 239
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.27 E-value=0.079 Score=47.96 Aligned_cols=94 Identities=11% Similarity=0.097 Sum_probs=61.1
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEE-cCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFV-NSKNCGDKSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi-~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
+|||+|+ |-+|..+++.+...|. +|.+++++.++...+...+++.+. |..+ . +.+.+... ++|+||++.+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d---~---~~l~~al~-g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL---P---ETLPPSFK-GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC---H---HHHHHHHC-CCCEEEECCC
Confidence 7999997 9999999999988898 999999987766555555654332 2212 1 22333222 6899999876
Q ss_pred cHH------------HHHHHHHHhhcCCc--EEEEeccC
Q 020435 220 LAS------------LVQEAYACCRKGWG--KTIVLGVD 244 (326)
Q Consensus 220 ~~~------------~~~~~~~~l~~~~G--~~v~~g~~ 244 (326)
... ....+++.++.. | ++|.++..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~l~~aa~~~-gvkr~I~~Ss~ 111 (317)
T CHL00194 74 SRPSDLYNAKQIDWDGKLALIEAAKAA-KIKRFIFFSIL 111 (317)
T ss_pred CCCCCccchhhhhHHHHHHHHHHHHHc-CCCEEEEeccc
Confidence 321 123445555554 4 78877653
No 240
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.27 E-value=0.09 Score=46.79 Aligned_cols=138 Identities=22% Similarity=0.274 Sum_probs=78.4
Q ss_pred cccceEEecccceEEcCCCCCccccccccchhhhhhhhhhh-hcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEc
Q 020435 93 SFSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWR-TANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD 171 (326)
Q Consensus 93 ~~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~-~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~ 171 (326)
+|.+|..-....++++.+++.+- ......|++. +.- ....++|.+||=.|+|+ |.+++. |..+|+.+|++++
T Consensus 120 sw~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lc-L~~Le~~~~~g~~vlDvGcGS-GILaIA-a~kLGA~~v~g~D 192 (300)
T COG2264 120 SWREYPEPSDELNIELDPGLAFG----TGTHPTTSLC-LEALEKLLKKGKTVLDVGCGS-GILAIA-AAKLGAKKVVGVD 192 (300)
T ss_pred CCccCCCCCCceEEEEccccccC----CCCChhHHHH-HHHHHHhhcCCCEEEEecCCh-hHHHHH-HHHcCCceEEEec
Confidence 35444333245566666666432 2223333333 221 12356899999999765 665554 3456776899999
Q ss_pred CChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHH---HHHHHHHHhhcCCcEEEEeccC
Q 020435 172 VISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS---LVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 172 ~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~---~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.++-..+.+++ -++...+.... .+.. .....+.+|+|+..+=... ..+.....++++ |++++.|..
T Consensus 193 iDp~AV~aa~eNa~~N~v~~~~~~~~---~~~~---~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl 265 (300)
T COG2264 193 IDPQAVEAARENARLNGVELLVQAKG---FLLL---EVPENGPFDVIVANILAEVLVELAPDIKRLLKPG-GRLILSGIL 265 (300)
T ss_pred CCHHHHHHHHHHHHHcCCchhhhccc---ccch---hhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeeh
Confidence 98877666543 33332111111 1111 1112238999996554433 245778899998 999999865
No 241
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=96.26 E-value=0.044 Score=47.41 Aligned_cols=105 Identities=15% Similarity=0.194 Sum_probs=66.5
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHh
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~ 206 (326)
....+..++.+||-.|.|. |..++.+++.++ ..+|+.++.+++..+.+++ .|...-+.... .+..+.+.++
T Consensus 61 ~~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~---gda~~~L~~l 136 (234)
T PLN02781 61 SMLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ---SDALSALDQL 136 (234)
T ss_pred HHHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---ccHHHHHHHH
Confidence 3445666788999998643 666666777653 3499999999988777654 45332222222 3344444443
Q ss_pred c----CCCccEEE-EcCCc--HHHHHHHHHHhhcCCcEEEEe
Q 020435 207 T----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 207 ~----~~g~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~ 241 (326)
. .+.||+|| |+.-. ...+..+.+.++++ |.++.-
T Consensus 137 ~~~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~d 177 (234)
T PLN02781 137 LNNDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFD 177 (234)
T ss_pred HhCCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEE
Confidence 2 23899998 54322 34477889999998 877654
No 242
>PRK06128 oxidoreductase; Provisional
Probab=96.26 E-value=0.07 Score=47.86 Aligned_cols=102 Identities=23% Similarity=0.202 Sum_probs=61.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--H----HHHHhcCCcE-EE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--F----EIGKRFGVTE-FV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~--~----~~~~~~g~~~-vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.+.++.+. . +.++..+.+. .+ |..+ ..+..+.+.+...
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~ 130 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD--EAFCRQLVERAVK 130 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC--HHHHHHHHHHHHH
Confidence 4689999987 9999999999988999 88887654321 1 2233344322 22 2222 1222333333222
Q ss_pred --CCccEEEEcCCcH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 020435 209 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 209 --~g~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+++|++|+++|.. ...+.+...+.++ |+++.++..
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~ 193 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSI 193 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCc
Confidence 3799999988731 0223344455676 898887653
No 243
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.26 E-value=0.051 Score=45.87 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=31.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 46799999999999999999999998889999866
No 244
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.25 E-value=0.11 Score=43.84 Aligned_cols=81 Identities=27% Similarity=0.354 Sum_probs=56.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.|.+|+|.|.|.+|..+++.+...|+ +|++.++++++.+.+.+ +++. .++.++ + ....+|+++-|
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~---------l---~~~~~Dv~vp~ 92 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE---------I---YSVDADVFAPC 92 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh---------h---ccccCCEEEec
Confidence 57899999999999999999999999 99999998887776654 4653 333221 1 11158888866
Q ss_pred CCcHHHHHHHHHHhhc
Q 020435 218 VGLASLVQEAYACCRK 233 (326)
Q Consensus 218 ~g~~~~~~~~~~~l~~ 233 (326)
......-...+..|+.
T Consensus 93 A~~~~I~~~~~~~l~~ 108 (200)
T cd01075 93 ALGGVINDDTIPQLKA 108 (200)
T ss_pred ccccccCHHHHHHcCC
Confidence 5544434455566654
No 245
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.25 E-value=0.028 Score=49.23 Aligned_cols=80 Identities=15% Similarity=0.238 Sum_probs=49.1
Q ss_pred CCCEEEEEccC---HHHHHHHHHHHHcCCCEEEEEcCChhHH---HHH-HhcCCcEEEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGLG---SIGLAVAEGARLCGATRIIGVDVISEKF---EIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Gag---~~G~~a~~la~~~g~~~V~~~~~~~~~~---~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|++ +||.++++.+...|+ +|+.++++++.. +.+ ++++....+.-+-.+.++..+.+.+... +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 47899999863 899999999988999 899988875432 222 2334323332221012233333333322 3
Q ss_pred CccEEEEcCC
Q 020435 210 GADYCFECVG 219 (326)
Q Consensus 210 g~d~v~d~~g 219 (326)
.+|++++++|
T Consensus 88 ~ld~lv~nAg 97 (258)
T PRK07533 88 RLDFLLHSIA 97 (258)
T ss_pred CCCEEEEcCc
Confidence 7999998886
No 246
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.24 E-value=0.052 Score=50.63 Aligned_cols=91 Identities=23% Similarity=0.308 Sum_probs=59.5
Q ss_pred EEEEccCHHHHHHHHHHHHcCCC-EEEEEcCChhHHHHHHh--cC--Cc-EEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 143 VVIFGLGSIGLAVAEGARLCGAT-RIIGVDVISEKFEIGKR--FG--VT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 143 vlI~Gag~~G~~a~~la~~~g~~-~V~~~~~~~~~~~~~~~--~g--~~-~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
|+|+|+|.+|..+++.+...+-. +|++.+++.++.+.+.+ .+ .. ..+|..+ .+.+.++.. +.|+|++
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~------~~~l~~~~~-~~dvVin 73 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND------PESLAELLR-GCDVVIN 73 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT------HHHHHHHHT-TSSEEEE
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC------HHHHHHHHh-cCCEEEE
Confidence 78999999999999999876543 89999999999877643 22 22 2233332 222444433 5799999
Q ss_pred cCCcHHHHHHHHHHhhcCCcEEEEe
Q 020435 217 CVGLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 217 ~~g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
|++.......+-.++..+ -.++..
T Consensus 74 ~~gp~~~~~v~~~~i~~g-~~yvD~ 97 (386)
T PF03435_consen 74 CAGPFFGEPVARACIEAG-VHYVDT 97 (386)
T ss_dssp -SSGGGHHHHHHHHHHHT--EEEES
T ss_pred CCccchhHHHHHHHHHhC-CCeecc
Confidence 999776466666778887 788874
No 247
>PRK05717 oxidoreductase; Validated
Probab=96.23 E-value=0.03 Score=48.77 Aligned_cols=79 Identities=19% Similarity=0.237 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ ++++.. +.+ |..+ ..+..+.+.+... +++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD--EAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC--HHHHHHHHHHHHHHhCCC
Confidence 3678999987 9999999999988898 999998877655443 344422 222 2222 1223233333322 269
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++|.+.+.
T Consensus 86 d~li~~ag~ 94 (255)
T PRK05717 86 DALVCNAAI 94 (255)
T ss_pred CEEEECCCc
Confidence 999998874
No 248
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.23 E-value=0.1 Score=42.07 Aligned_cols=80 Identities=26% Similarity=0.283 Sum_probs=49.6
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC--hhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhc--CCC
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI--SEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 210 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~--~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~--~~g 210 (326)
+++||+|+ +++|..+++.+...|..+|+.+.++ .++.+.+ +..+.. .++..+-...++..+.+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 37899987 9999999988887776588888888 4443332 334432 222222101233333444443 238
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++|.|.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999886
No 249
>PRK06484 short chain dehydrogenase; Validated
Probab=96.23 E-value=0.089 Score=51.07 Aligned_cols=102 Identities=23% Similarity=0.261 Sum_probs=67.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcE-E--EcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTE-F--VNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~-v--i~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
.+.++||+|+ +++|..+++.+...|+ +|+.+++++++.+.+.+ ++... . .|..+ .++..+.+.+... +.+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD--EAAVESAFAQIQARWGRL 344 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC--HHHHHHHHHHHHHHcCCC
Confidence 5789999987 8999999999999999 99999998887766543 44322 1 23222 1233333333322 379
Q ss_pred cEEEEcCCcH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 020435 212 DYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 212 d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|++|+++|.. ...+.++..++.+ |+++.++..
T Consensus 345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~ 402 (520)
T PRK06484 345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSI 402 (520)
T ss_pred CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECch
Confidence 9999988741 0133444555666 899988764
No 250
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.037 Score=47.68 Aligned_cols=79 Identities=20% Similarity=0.212 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
...++||+|+ |.+|..+++.+...|. +|+++++++++.+.+.+ .+.. .++ |..+ .+++.+.+.+...
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSN--PEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 4578999987 9999999999998999 99999998876654422 2221 122 2222 2233333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++++.|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 279999998874
No 251
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.21 E-value=0.032 Score=48.60 Aligned_cols=79 Identities=24% Similarity=0.341 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ +..|.. ..+ |..+ .+++.+.+.+...
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 85 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD--HDAVRAAIDAFEAEI 85 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4789999987 9999999999888899 899999887765432 223322 222 2222 2233333333221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|++.+.
T Consensus 86 ~~~d~li~~ag~ 97 (255)
T PRK07523 86 GPIDILVNNAGM 97 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 252
>PRK01581 speE spermidine synthase; Validated
Probab=96.21 E-value=0.1 Score=47.73 Aligned_cols=104 Identities=13% Similarity=0.093 Sum_probs=65.6
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-c----EEEcCCCC--CCccHHHHHHHhcCC
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-T----EFVNSKNC--GDKSVSQIIIDMTDG 209 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~-~----~vi~~~~~--~~~~~~~~i~~~~~~ 209 (326)
.....+|||+|+|. |.++..+++..+..+|++++.+++-.+.++++.. . ..++.... -..+..+.+.+ ..+
T Consensus 148 h~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~ 225 (374)
T PRK01581 148 VIDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSS 225 (374)
T ss_pred CCCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCC
Confidence 34567999999764 6677777887665599999999998888885210 0 00000000 00223333433 334
Q ss_pred CccEEE-EcCCc----------HHHHHHHHHHhhcCCcEEEEecc
Q 020435 210 GADYCF-ECVGL----------ASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 210 g~d~v~-d~~g~----------~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.+|+|| |.... ..++..+.+.|+++ |.++....
T Consensus 226 ~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~ 269 (374)
T PRK01581 226 LYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN 269 (374)
T ss_pred CccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence 899998 54321 33578889999998 99887643
No 253
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.20 E-value=0.061 Score=40.03 Aligned_cols=88 Identities=22% Similarity=0.310 Sum_probs=58.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.+.+|||+|+|.+|..-++.+...|+ +|++++... +..+ +.-... . ..+. +.. .++|+|+-+.
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~-~-----~~~~----~~l-~~~~lV~~at 68 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLI-R-----REFE----EDL-DGADLVFAAT 68 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEE-E-----SS-G----GGC-TTESEEEE-S
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHH-h-----hhHH----HHH-hhheEEEecC
Confidence 47899999999999999999999999 999998765 2222 211111 1 1221 011 2799999999
Q ss_pred CcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 219 GLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 219 g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+.+..-+......+.. |.++.....
T Consensus 69 ~d~~~n~~i~~~a~~~-~i~vn~~D~ 93 (103)
T PF13241_consen 69 DDPELNEAIYADARAR-GILVNVVDD 93 (103)
T ss_dssp S-HHHHHHHHHHHHHT-TSEEEETT-
T ss_pred CCHHHHHHHHHHHhhC-CEEEEECCC
Confidence 9988666777777776 888887653
No 254
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.039 Score=48.30 Aligned_cols=81 Identities=23% Similarity=0.320 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c--CC-cEEEcCCCCCCccHHHHHHHhc-CCCcc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GV-TEFVNSKNCGDKSVSQIIIDMT-DGGAD 212 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~--g~-~~vi~~~~~~~~~~~~~i~~~~-~~g~d 212 (326)
++.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. + +. .+.+..+-.+..+..+.+.... .+++|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999987 9999999999988999 89999998877665432 1 21 1222211100122222222221 23899
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
.++.++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99998875
No 255
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.033 Score=49.15 Aligned_cols=78 Identities=21% Similarity=0.321 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hh---cC--Cc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KR---FG--VT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~---~g--~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.. .+ .+ .. .++ |..+ .+++.+.+.+...
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD--EDQVARAVDAATA 82 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 3679999997 9999999999999999 899999887665432 22 11 11 222 2222 1233333333322
Q ss_pred --CCccEEEEcCC
Q 020435 209 --GGADYCFECVG 219 (326)
Q Consensus 209 --~g~d~v~d~~g 219 (326)
+++|++|.+.+
T Consensus 83 ~~~~~d~li~~ag 95 (276)
T PRK05875 83 WHGRLHGVVHCAG 95 (276)
T ss_pred HcCCCCEEEECCC
Confidence 27999999887
No 256
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.19 E-value=0.035 Score=48.47 Aligned_cols=79 Identities=20% Similarity=0.384 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+.. +.+ |..+ .+++.+.+.++..
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d--~~~i~~~~~~~~~~~ 87 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD--EADIERLAEETLERF 87 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4689999987 9999999999988999 9999999887765443 22322 222 2222 2233333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|.++.+.+.
T Consensus 88 ~~id~vi~~ag~ 99 (259)
T PRK08213 88 GHVDILVNNAGA 99 (259)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 257
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.032 Score=48.47 Aligned_cols=81 Identities=25% Similarity=0.307 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+.. +.+..+-.+..++.+.+.+... ++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999987 9999999998888898 899999987765433 233422 2222221011223332332221 37
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++++.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 258
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.18 E-value=0.033 Score=48.67 Aligned_cols=79 Identities=22% Similarity=0.271 Sum_probs=51.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~-----g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.++||+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++ +.. .++ |..+ .+++.+.+.+...
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 82 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD--AASVAAAVAAAEE 82 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4679999987 8999999999999999 8999999877665432 22 221 122 2222 2233333333322
Q ss_pred --CCccEEEEcCCc
Q 020435 209 --GGADYCFECVGL 220 (326)
Q Consensus 209 --~g~d~v~d~~g~ 220 (326)
+++|++++++|.
T Consensus 83 ~~g~id~li~~ag~ 96 (260)
T PRK07063 83 AFGPLDVLVNNAGI 96 (260)
T ss_pred HhCCCcEEEECCCc
Confidence 379999998873
No 259
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.033 Score=48.47 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=52.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EE--EcCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EF--VNSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~v--i~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+.+ .+.. +. .|..+ .+++...+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 80 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD--EDQCANLVALALERF 80 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC--HHHHHHHHHHHHHHc
Confidence 4679999987 9999999999999999 99999998876554422 2321 12 22222 2233333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|.+.+.
T Consensus 81 g~~d~vi~~ag~ 92 (258)
T PRK07890 81 GRVDALVNNAFR 92 (258)
T ss_pred CCccEEEECCcc
Confidence 379999998864
No 260
>PLN02476 O-methyltransferase
Probab=96.16 E-value=0.05 Score=48.09 Aligned_cols=105 Identities=16% Similarity=0.197 Sum_probs=68.2
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHH----hcCCcEEEcCCCCCCccHHHHHHHhc
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
...+..+..+||-+|.+. |..++.+|+.++ -.+|+.++.+++..+.++ +.|..+-+.... .+..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~---GdA~e~L~~l~ 187 (278)
T PLN02476 112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH---GLAAESLKSMI 187 (278)
T ss_pred HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHH
Confidence 345566788999998643 666667777664 227999999998877764 356543232222 34445554432
Q ss_pred ----CCCccEEE-EcCCc--HHHHHHHHHHhhcCCcEEEEec
Q 020435 208 ----DGGADYCF-ECVGL--ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 208 ----~~g~d~v~-d~~g~--~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.+.||.|| |+.-. ...+..+++.|+++ |.++.=.
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN 228 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN 228 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence 23899998 65543 33477889999997 8876543
No 261
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.037 Score=48.38 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=50.2
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhcC--CCcc
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD 212 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d 212 (326)
.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+ +..+.. +++..+-.+..++.+.+.+... +++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999987 9999999999989998 999999987665433 223332 2221111012233333333322 2799
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
+++.|.+.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
No 262
>PRK08643 acetoin reductase; Validated
Probab=96.16 E-value=0.033 Score=48.48 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=50.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCcE-EE--cCCCCCCccHHHHHHHhcC--C
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE-FV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~~-vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. +.+... .+ |..+ .+.+.+.+.+... +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD--RDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 568999987 9999999999988999 9999998877654432 223221 22 2222 1223333333321 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++.+.|.
T Consensus 79 ~id~vi~~ag~ 89 (256)
T PRK08643 79 DLNVVVNNAGV 89 (256)
T ss_pred CCCEEEECCCC
Confidence 79999998864
No 263
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.035 Score=48.09 Aligned_cols=81 Identities=21% Similarity=0.192 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c--CCc-EEEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F--GVT-EFVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~--g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+.++.++.+...+ + +.. ..+..+-.+.....+.+.+... +++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3679999987 9999999998888898 89999988776544322 2 321 2222121011223333333322 389
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|+++.+.+.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999998884
No 264
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.14 E-value=0.036 Score=47.95 Aligned_cols=80 Identities=21% Similarity=0.187 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-cEEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-TEFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~-~~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. ..+. .+++..+-...+.+.+.+.++.. ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999987 9999999999988999 8999998877655432 2232 22332222011223333333222 27
Q ss_pred ccEEEEcCC
Q 020435 211 ADYCFECVG 219 (326)
Q Consensus 211 ~d~v~d~~g 219 (326)
+|++|.+.+
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 999999887
No 265
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.14 E-value=0.039 Score=48.08 Aligned_cols=80 Identities=21% Similarity=0.204 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-EEcCCCCCCcc-HHHHHHHhc--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKS-VSQIIIDMT--DG 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-vi~~~~~~~~~-~~~~i~~~~--~~ 209 (326)
++.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+ ++.+.+. .+..+- .+.+ +.+.+.+.. .+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~~~ 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDV-TNEDAVNAGIDKVAERFG 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCC-CCHHHHHHHHHHHHHHcC
Confidence 3679999997 9999999999989999 899999988665433 3344332 222111 1122 222222221 13
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++.|.+.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 79999998874
No 266
>PRK06194 hypothetical protein; Provisional
Probab=96.12 E-value=0.038 Score=49.07 Aligned_cols=80 Identities=21% Similarity=0.264 Sum_probs=50.2
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h---cCCc-EEEcCCCCCCccHHHHHHHhc--CCCc
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R---FGVT-EFVNSKNCGDKSVSQIIIDMT--DGGA 211 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~---~g~~-~vi~~~~~~~~~~~~~i~~~~--~~g~ 211 (326)
+.++||+|+ |.+|..+++.+...|+ +|++++++.++.+... + .+.. .++..+-.+.+++.+.+.... .+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999987 9999999999888999 8999998876654432 2 2332 122222100122322233221 1378
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++|+++|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999998875
No 267
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.018 Score=50.62 Aligned_cols=76 Identities=22% Similarity=0.288 Sum_probs=50.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcE-EEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYCF 215 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~g~d~v~ 215 (326)
+.+++|+|+ |.+|..+++.+...|+ +|++++++.++.+... +... ..|..+ .+++.+.+.+... +.+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d--~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVTD--DASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecCC--HHHHHHHHHHHHHhCCCCCEEE
Confidence 568999987 9999999999888899 8999998866554321 2221 123222 2334444443322 3799999
Q ss_pred EcCCc
Q 020435 216 ECVGL 220 (326)
Q Consensus 216 d~~g~ 220 (326)
++.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99884
No 268
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.041 Score=47.66 Aligned_cols=79 Identities=25% Similarity=0.286 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+. +.+.. +.+ |..+ ...+.+.+.+...
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 81 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSD--PDSAKAMADATVSAF 81 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 9999999998888898 9999999876654332 22211 222 2222 1222222222221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (250)
T PRK07774 82 GGIDYLVNNAAI 93 (250)
T ss_pred CCCCEEEECCCC
Confidence 279999998883
No 269
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.09 E-value=0.039 Score=47.90 Aligned_cols=78 Identities=17% Similarity=0.195 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ .+.. +.+ |..+ ..+..+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 83 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE--MEQIDALFAHIRERH 83 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 3578999987 9999999999999999 99999998776554322 2321 222 2222 1223333333322
Q ss_pred CCccEEEEcCC
Q 020435 209 GGADYCFECVG 219 (326)
Q Consensus 209 ~g~d~v~d~~g 219 (326)
+.+|+++++.+
T Consensus 84 ~~id~li~~ag 94 (252)
T PRK07035 84 GRLDILVNNAA 94 (252)
T ss_pred CCCCEEEECCC
Confidence 26999998887
No 270
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.09 E-value=0.037 Score=48.53 Aligned_cols=78 Identities=24% Similarity=0.272 Sum_probs=48.0
Q ss_pred CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCcEEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTEFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g--~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ + ++|.++++.+...|+ +|+.+.++++..+.++ +.+....+ |..+ .++..+.+.+...
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~--~~~v~~~~~~~~~~ 83 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN--PKSISNLFDDIKEK 83 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC--HHHHHHHHHHHHHH
Confidence 4678999987 4 799999988888899 8988887643222222 23433322 3322 2233333333322
Q ss_pred -CCccEEEEcCC
Q 020435 209 -GGADYCFECVG 219 (326)
Q Consensus 209 -~g~d~v~d~~g 219 (326)
+.+|+++++++
T Consensus 84 ~g~iDilVnnag 95 (260)
T PRK06603 84 WGSFDFLLHGMA 95 (260)
T ss_pred cCCccEEEEccc
Confidence 37999998876
No 271
>PRK04457 spermidine synthase; Provisional
Probab=96.09 E-value=0.081 Score=46.59 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=65.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CC----c--EEEcCCCCCCccHHHHHHHhcCCC
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GV----T--EFVNSKNCGDKSVSQIIIDMTDGG 210 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g~----~--~vi~~~~~~~~~~~~~i~~~~~~g 210 (326)
.++.+||++|.|+ |.++..+++..+..++++++.+++-.+.+++. +. + +++. .+..+.+.+. .+.
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~------~Da~~~l~~~-~~~ 136 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE------ADGAEYIAVH-RHS 136 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE------CCHHHHHHhC-CCC
Confidence 4567899999876 77777888776433899999999988888763 21 1 2232 2333444332 348
Q ss_pred ccEEE-EcCCc---------HHHHHHHHHHhhcCCcEEEEe
Q 020435 211 ADYCF-ECVGL---------ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 211 ~d~v~-d~~g~---------~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+|+ |.... ...++.+.+.|+++ |.++..
T Consensus 137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin 176 (262)
T PRK04457 137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN 176 (262)
T ss_pred CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence 99997 65332 46688999999998 999874
No 272
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.04 Score=48.13 Aligned_cols=77 Identities=19% Similarity=0.220 Sum_probs=51.9
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cC-C-cEE--EcCCCCCCccHHHHHHHhc---CCCc
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FG-V-TEF--VNSKNCGDKSVSQIIIDMT---DGGA 211 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g-~-~~v--i~~~~~~~~~~~~~i~~~~---~~g~ 211 (326)
.++||+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. ++ . -++ .|..+ ..++.+.+.... .+++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~~~~i 78 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD--RAAWDAALADFAAATGGRL 78 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHHcCCCC
Confidence 47999987 9999999998888999 99999999887766543 22 1 122 23332 122333333321 3489
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|+++.++|.
T Consensus 79 d~vi~~ag~ 87 (260)
T PRK08267 79 DVLFNNAGI 87 (260)
T ss_pred CEEEECCCC
Confidence 999998885
No 273
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.043 Score=49.65 Aligned_cols=79 Identities=18% Similarity=0.170 Sum_probs=50.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc-----CCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~-----g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.+++|+|+ +++|.++++.+...|+ +|+.++++.++.+.+. ++ +.. +++ |..+ .++..+.+.++..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d--~~sv~~~~~~~~~ 89 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS--LASVAALGEQLRA 89 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC--HHHHHHHHHHHHH
Confidence 3679999997 8999999999888999 9999999887655432 11 111 122 3222 1222222333222
Q ss_pred --CCccEEEEcCCc
Q 020435 209 --GGADYCFECVGL 220 (326)
Q Consensus 209 --~g~d~v~d~~g~ 220 (326)
+++|++++++|.
T Consensus 90 ~~~~iD~li~nAG~ 103 (313)
T PRK05854 90 EGRPIHLLINNAGV 103 (313)
T ss_pred hCCCccEEEECCcc
Confidence 279999988774
No 274
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.07 E-value=0.059 Score=48.04 Aligned_cols=42 Identities=29% Similarity=0.243 Sum_probs=37.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 180 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~ 180 (326)
.+.+|+|+|+|++|.+++..+...|+.+|++++++.++.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 467999999999999999999999987899999998887654
No 275
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.06 E-value=0.045 Score=47.06 Aligned_cols=78 Identities=23% Similarity=0.308 Sum_probs=51.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-E--EcCCCCCCccHHHHHHHhcC--C
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-v--i~~~~~~~~~~~~~i~~~~~--~ 209 (326)
+.+|||+|+ |.+|..+++.+...|. +|+++.+++++.+.+ +..+... . .|..+ ...+.+.+.+... +
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD--EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHhC
Confidence 468999997 9999999999988899 899999988775443 2334322 2 22222 1223333333321 2
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
.+|.++.+++.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 78999998864
No 276
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.06 E-value=0.058 Score=46.11 Aligned_cols=96 Identities=20% Similarity=0.262 Sum_probs=63.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcE--EEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE--FVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~--vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
-+|.+||=+|+|+ |.++.-+|+ .|+ .|++++.+++..+.++.-.... -+++.. ...+.+.+. ++.||+|+
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~----~~~edl~~~-~~~FDvV~ 129 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ----ATVEDLASA-GGQFDVVT 129 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh----hhHHHHHhc-CCCccEEE
Confidence 4788999999865 555555554 568 9999999999998887422111 144554 233333332 14899997
Q ss_pred E-----cCCcH-HHHHHHHHHhhcCCcEEEEec
Q 020435 216 E-----CVGLA-SLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 216 d-----~~g~~-~~~~~~~~~l~~~~G~~v~~g 242 (326)
+ -+..+ .++..+.+.++|+ |.++..-
T Consensus 130 cmEVlEHv~dp~~~~~~c~~lvkP~-G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPESFLRACAKLVKPG-GILFLST 161 (243)
T ss_pred EhhHHHccCCHHHHHHHHHHHcCCC-cEEEEec
Confidence 4 34443 3577899999998 8887653
No 277
>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph
Probab=96.06 E-value=0.098 Score=44.98 Aligned_cols=92 Identities=23% Similarity=0.237 Sum_probs=60.8
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCC--EEEEEcCC----hhH--------HHHHHhcCCcEEEcCCCCCCccHHHHH
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGAT--RIIGVDVI----SEK--------FEIGKRFGVTEFVNSKNCGDKSVSQII 203 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~--~V~~~~~~----~~~--------~~~~~~~g~~~vi~~~~~~~~~~~~~i 203 (326)
-.+.+|+|+|+|+.|..++..+...|++ +++.++++ .++ .++++.++... .+ .++.+.+
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~----~~---~~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK----TG---GTLKEAL 95 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc----cc---CCHHHHH
Confidence 3578999999999999999999889997 79999988 343 22334443211 11 2333433
Q ss_pred HHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 204 IDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 204 ~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
. ++|++|++.+........++.+.++ ..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~-~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKD-PIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCC-CEEEEeC
Confidence 2 4899999997433234666777776 6555443
No 278
>PRK09186 flagellin modification protein A; Provisional
Probab=96.04 E-value=0.042 Score=47.78 Aligned_cols=78 Identities=21% Similarity=0.358 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc----CCc--EE--EcCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF----GVT--EF--VNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~----g~~--~v--i~~~~~~~~~~~~~i~~~~~ 208 (326)
++.++||+|+ |.+|..++..+...|+ +|+.+.+++++.+.+ .++ +.. .+ .|..+ .+++.+.+.+...
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~ 79 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD--QESLEEFLSKSAE 79 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC--HHHHHHHHHHHHH
Confidence 4689999987 8999999999999999 899999888776543 222 221 11 23322 2333333443322
Q ss_pred --CCccEEEEcCC
Q 020435 209 --GGADYCFECVG 219 (326)
Q Consensus 209 --~g~d~v~d~~g 219 (326)
+++|+++++.+
T Consensus 80 ~~~~id~vi~~A~ 92 (256)
T PRK09186 80 KYGKIDGAVNCAY 92 (256)
T ss_pred HcCCccEEEECCc
Confidence 37999999875
No 279
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.04 E-value=0.051 Score=46.71 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=51.0
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHH-HHHHhcCCcEEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKF-EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF 215 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~-~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~--~g~d~v~ 215 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.++++++.. +.++..++. .+..+-.+.++..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 458999987 8999999999988999 999999876543 334445542 222211012333333333332 2699999
Q ss_pred EcCCc
Q 020435 216 ECVGL 220 (326)
Q Consensus 216 d~~g~ 220 (326)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98874
No 280
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.04 E-value=0.041 Score=48.32 Aligned_cols=81 Identities=21% Similarity=0.335 Sum_probs=48.6
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ +++|.++++.+...|+ +|+.+.+.+...+.+++ .+....+..+-.+.++..+.+.+... +
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4679999984 5899999999988999 89888765433333322 34222222111012333333333322 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++++++|.
T Consensus 84 ~iD~lVnnAG~ 94 (261)
T PRK08690 84 GLDGLVHSIGF 94 (261)
T ss_pred CCcEEEECCcc
Confidence 89999998864
No 281
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.04 E-value=0.04 Score=48.06 Aligned_cols=79 Identities=19% Similarity=0.203 Sum_probs=51.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-EEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~---~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+++++++.+...+ .+.. +.+ |..+ .+++.+.+.+... +
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 82 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTD--DAQCRDAVEQTVAKFG 82 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhcC
Confidence 3679999987 8999999999988999 89999988876643332 3322 222 2222 1223333333322 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (258)
T PRK08628 83 RIDGLVNNAGV 93 (258)
T ss_pred CCCEEEECCcc
Confidence 79999999883
No 282
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.051 Score=47.04 Aligned_cols=77 Identities=18% Similarity=0.303 Sum_probs=50.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-EEE--cCCCCCCccHHHHHHHhcC-
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~--g~~-~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
+.++||+|+ |.+|..+++.+...|. +|+.+++++++.+.+.. . +.. +++ |..+ .+++.+.+.+...
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~ 78 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND--HDQVFEVFAEFRDE 78 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 468999987 9999999988888898 99999998877655432 1 211 222 3222 2233333443322
Q ss_pred -CCccEEEEcCC
Q 020435 209 -GGADYCFECVG 219 (326)
Q Consensus 209 -~g~d~v~d~~g 219 (326)
+++|++|.+.|
T Consensus 79 ~~~id~vi~~ag 90 (248)
T PRK08251 79 LGGLDRVIVNAG 90 (248)
T ss_pred cCCCCEEEECCC
Confidence 37999999886
No 283
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.04 Score=48.09 Aligned_cols=80 Identities=19% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHhcCCcE---EEcCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFGVTE---FVNSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~----~~~~~g~~~---vi~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.+++|+|+ |.+|..+++.+...|+.+|+++++++++.+ .++..+... ..|..+ .+.+.+.+.....
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD--VEDCRRVVAAADEAF 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC--HHHHHHHHHHHHHHh
Confidence 4678999987 899999999999999933999998876554 233344322 123322 1223333332211
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|++.+.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 379999999874
No 284
>PRK09242 tropinone reductase; Provisional
Probab=96.02 E-value=0.049 Score=47.48 Aligned_cols=79 Identities=22% Similarity=0.201 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c--CCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F--GVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~--g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ . +.+ ..+ |..+ .++..+.+.+...
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 84 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD--DEDRRAILDWVED 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC--HHHHHHHHHHHHH
Confidence 4789999987 8999999999999999 89999998877654321 1 221 122 2222 1223333333221
Q ss_pred --CCccEEEEcCCc
Q 020435 209 --GGADYCFECVGL 220 (326)
Q Consensus 209 --~g~d~v~d~~g~ 220 (326)
+++|+++.+.|.
T Consensus 85 ~~g~id~li~~ag~ 98 (257)
T PRK09242 85 HWDGLHILVNNAGG 98 (257)
T ss_pred HcCCCCEEEECCCC
Confidence 379999999984
No 285
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.02 E-value=0.049 Score=47.54 Aligned_cols=78 Identities=18% Similarity=0.187 Sum_probs=50.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC--c-EEE--cCCCCCCccHHHHHHHhcC--CC
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV--T-EFV--NSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~--~-~vi--~~~~~~~~~~~~~i~~~~~--~g 210 (326)
+.+|||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ +.. + +.+ |..+ .+++.+.+.+... +.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~g~ 78 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD--ADALAAAAADFIAAHGL 78 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC--HHHHHHHHHHHHHhCCC
Confidence 468999987 9999999999988899 99999998877665432 221 1 122 2222 1233333333322 26
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++++++|.
T Consensus 79 id~lv~~ag~ 88 (257)
T PRK07024 79 PDVVIANAGI 88 (257)
T ss_pred CCEEEECCCc
Confidence 8999998773
No 286
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.01 E-value=0.055 Score=47.06 Aligned_cols=81 Identities=25% Similarity=0.377 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +..+.. ..+..+-...+++.+.+.++.. ++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999987 8999999999988999 999999887765433 222322 2222221012233333333222 37
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++.+.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 287
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.01 E-value=0.045 Score=48.32 Aligned_cols=77 Identities=17% Similarity=0.204 Sum_probs=51.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-EE--EcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EF--VNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
.++||+|+ |.+|..+++.+...|. +|+++.+++++.+.+++ .+.. .+ .|..+ .+.+.+.+.+... +++|+
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD--SAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 57999987 9999999998888898 99999999887766544 2221 12 22222 1223333333222 37899
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
+|.++|.
T Consensus 80 vi~~ag~ 86 (276)
T PRK06482 80 VVSNAGY 86 (276)
T ss_pred EEECCCC
Confidence 9998874
No 288
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.00 E-value=0.046 Score=49.15 Aligned_cols=79 Identities=18% Similarity=0.186 Sum_probs=50.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc-----CCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF-----GVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~-----g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.+|||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+ +.+ +.. +.+ |..+ ..+..+.+.++..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~~~ 91 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS--LASVRAAADALRA 91 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC--HHHHHHHHHHHHh
Confidence 4689999987 9999999998888899 899999887765432 111 111 122 2222 1223333333322
Q ss_pred --CCccEEEEcCCc
Q 020435 209 --GGADYCFECVGL 220 (326)
Q Consensus 209 --~g~d~v~d~~g~ 220 (326)
+++|++|+++|.
T Consensus 92 ~~~~iD~li~nAg~ 105 (306)
T PRK06197 92 AYPRIDLLINNAGV 105 (306)
T ss_pred hCCCCCEEEECCcc
Confidence 279999998873
No 289
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=95.99 E-value=0.038 Score=48.22 Aligned_cols=78 Identities=26% Similarity=0.287 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH---hcCCcE-E--EcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK---RFGVTE-F--VNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~---~~g~~~-v--i~~~~~~~~~~~~~i~~~~~--~ 209 (326)
.+.++||+|+ |.+|.++++.+...|+ +|+.+++++...+... ..+.+. . .|..+ .++..+.+.+... +
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 83 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET--YAGAQAAMAAAVEAFG 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC--HHHHHHHHHHHHHHcC
Confidence 3679999987 9999999999988999 8999998754333332 234321 1 23222 1233333333322 3
Q ss_pred CccEEEEcCC
Q 020435 210 GADYCFECVG 219 (326)
Q Consensus 210 g~d~v~d~~g 219 (326)
++|++++++|
T Consensus 84 ~id~lv~nAg 93 (260)
T PRK12823 84 RIDVLINNVG 93 (260)
T ss_pred CCeEEEECCc
Confidence 7999999886
No 290
>PRK08263 short chain dehydrogenase; Provisional
Probab=95.98 E-value=0.049 Score=48.12 Aligned_cols=80 Identities=16% Similarity=0.129 Sum_probs=51.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCC-cEEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGV-TEFVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~-~~vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
+.+|||+|+ |.+|..+++.+...|. +|+.+++++++.+.+.+ ++. -+.+..+-.+..++.+.+.+... +++|++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999987 9999999998888898 89999998887765543 221 12222211011233333333221 379999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
+.|+|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999874
No 291
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=95.98 E-value=0.047 Score=48.22 Aligned_cols=80 Identities=26% Similarity=0.253 Sum_probs=50.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
++.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+. ..+.. +.+..+-....+..+.+.+... ++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999999999999 8999998876654332 22322 2222111011223333333222 38
Q ss_pred ccEEEEcCC
Q 020435 211 ADYCFECVG 219 (326)
Q Consensus 211 ~d~v~d~~g 219 (326)
+|++|++++
T Consensus 88 id~li~~ag 96 (278)
T PRK08277 88 CDILINGAG 96 (278)
T ss_pred CCEEEECCC
Confidence 999999887
No 292
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.96 E-value=0.046 Score=47.65 Aligned_cols=78 Identities=18% Similarity=0.248 Sum_probs=49.7
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc--EEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT--EFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~--~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
.++++||+|+ +++|.++++.+...|+ +|+.+.++++..+.++++... +.+ |..+ .++..+.+.+... +
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~g 82 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS--DESIERAFATIKERVG 82 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC--HHHHHHHHHHHHHHhC
Confidence 4789999986 3899999999988999 899998875444444443211 122 2222 2233333333322 3
Q ss_pred CccEEEEcCC
Q 020435 210 GADYCFECVG 219 (326)
Q Consensus 210 g~d~v~d~~g 219 (326)
.+|++++++|
T Consensus 83 ~iD~lv~nAg 92 (252)
T PRK06079 83 KIDGIVHAIA 92 (252)
T ss_pred CCCEEEEccc
Confidence 7999998877
No 293
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.96 E-value=0.12 Score=37.60 Aligned_cols=85 Identities=26% Similarity=0.289 Sum_probs=56.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcC---CCEEEEE-cCChhHHHHH-HhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 142 TVVIFGLGSIGLAVAEGARLCG---ATRIIGV-DVISEKFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g---~~~V~~~-~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
+|.|+|+|.+|.++++-+...| . +|+.+ .+++++.+.+ ++++.. +.. .+..+.+++ .|+||-
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~------~~~~~~~~~-----advvil 67 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA------DDNEEAAQE-----ADVVIL 67 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES------EEHHHHHHH-----TSEEEE
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc------CChHHhhcc-----CCEEEE
Confidence 5778899999999999888888 6 78845 9999988876 556653 222 133444443 899999
Q ss_pred cCCcHHHHHHHHHH---hhcCCcEEEEe
Q 020435 217 CVGLASLVQEAYAC---CRKGWGKTIVL 241 (326)
Q Consensus 217 ~~g~~~~~~~~~~~---l~~~~G~~v~~ 241 (326)
|+.... +...+.. ..++ ..++.+
T Consensus 68 av~p~~-~~~v~~~i~~~~~~-~~vis~ 93 (96)
T PF03807_consen 68 AVKPQQ-LPEVLSEIPHLLKG-KLVISI 93 (96)
T ss_dssp -S-GGG-HHHHHHHHHHHHTT-SEEEEE
T ss_pred EECHHH-HHHHHHHHhhccCC-CEEEEe
Confidence 988776 4444433 4454 555544
No 294
>PLN02253 xanthoxin dehydrogenase
Probab=95.95 E-value=0.042 Score=48.59 Aligned_cols=79 Identities=22% Similarity=0.253 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCC---cEEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGV---TEFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~---~~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
.+.++||+|+ |.+|.++++.+...|+ +|++++++++..+.+ ..++. .+.+ |..+ .+.+.+.+.+... +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~~~~~g 93 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV--EDDVSRAVDFTVDKFG 93 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC--HHHHHHHHHHHHHHhC
Confidence 3678999987 9999999998888899 999999877655433 22321 1222 2222 1223333333222 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++++++|.
T Consensus 94 ~id~li~~Ag~ 104 (280)
T PLN02253 94 TLDIMVNNAGL 104 (280)
T ss_pred CCCEEEECCCc
Confidence 79999998874
No 295
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.94 E-value=0.021 Score=54.35 Aligned_cols=93 Identities=12% Similarity=0.104 Sum_probs=62.5
Q ss_pred hhcccCCCCEEE----EEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-EEEcCCCCCCccHHHHHHHh
Q 020435 133 RTANVEVGSTVV----IFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 133 ~~~~~~~~~~vl----I~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~ 206 (326)
...++++|+.+| |+|+ |++|.+++|+++..|+ +|+++...+.+....+..+.+ .+++... ..+.+.+...
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATG---ITDPADLKAL 102 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCC---CCCHHHHHHH
Confidence 346677888888 8865 9999999999999999 999988766644444444444 4565554 3334444332
Q ss_pred cCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 207 TDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 207 ~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
. ..++..++.|.++ |+++.++..
T Consensus 103 ~--------------~~~~~~l~~l~~~-griv~i~s~ 125 (450)
T PRK08261 103 Y--------------EFFHPVLRSLAPC-GRVVVLGRP 125 (450)
T ss_pred H--------------HHHHHHHHhccCC-CEEEEEccc
Confidence 1 2255667777777 888887754
No 296
>PRK06914 short chain dehydrogenase; Provisional
Probab=95.94 E-value=0.049 Score=48.16 Aligned_cols=77 Identities=16% Similarity=0.151 Sum_probs=50.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---cEEE--cCCCCCCccHHHHHHHhcC-
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~---~~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
+.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+.+ .+. -+++ |..+ .+++.+ +.+...
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~~~~-~~~~~~~ 78 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD--QNSIHN-FQLVLKE 78 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC--HHHHHH-HHHHHHh
Confidence 568999987 9999999999888899 99999988776554322 221 1222 3222 223333 444322
Q ss_pred -CCccEEEEcCCc
Q 020435 209 -GGADYCFECVGL 220 (326)
Q Consensus 209 -~g~d~v~d~~g~ 220 (326)
+++|+++.|.|.
T Consensus 79 ~~~id~vv~~ag~ 91 (280)
T PRK06914 79 IGRIDLLVNNAGY 91 (280)
T ss_pred cCCeeEEEECCcc
Confidence 378999998874
No 297
>PRK06125 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.047 Score=47.69 Aligned_cols=77 Identities=23% Similarity=0.268 Sum_probs=50.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-----cCCc-EEE--cCCCCCCccHHHHHHHhcCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-----FGVT-EFV--NSKNCGDKSVSQIIIDMTDG 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-----~g~~-~vi--~~~~~~~~~~~~~i~~~~~~ 209 (326)
.+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+ .+.. +.+ |..+ .+++.+.+.+. +
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~--~~~~~~~~~~~--g 80 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSS--PEAREQLAAEA--G 80 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC--HHHHHHHHHHh--C
Confidence 4689999987 8999999999988999 99999998876654321 1321 222 2222 12222222221 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++++.|.
T Consensus 81 ~id~lv~~ag~ 91 (259)
T PRK06125 81 DIDILVNNAGA 91 (259)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 298
>PRK08862 short chain dehydrogenase; Provisional
Probab=95.93 E-value=0.056 Score=46.46 Aligned_cols=80 Identities=13% Similarity=0.088 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHHh---cCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDM---TDG 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-vi~~~~~~~~~~~~~i~~~---~~~ 209 (326)
++.+++|+|+ +++|.+++..+...|+ +|+.+.+++++.+.+ ++.+.+. .+.-+..+.++..+.+.+. .++
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4679999987 8999999999988999 899999988876543 2334321 2211111123333333332 222
Q ss_pred CccEEEEcCC
Q 020435 210 GADYCFECVG 219 (326)
Q Consensus 210 g~d~v~d~~g 219 (326)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999886
No 299
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.93 E-value=0.12 Score=46.99 Aligned_cols=94 Identities=17% Similarity=0.092 Sum_probs=64.9
Q ss_pred CCCCEEEEEccCHHHHHHHHHH-HHcCCCEEEEEcCChhHHHHHHh-----cCCcEEEcCCCCCCccHHHHHHHhcCCCc
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGA-RLCGATRIIGVDVISEKFEIGKR-----FGVTEFVNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la-~~~g~~~V~~~~~~~~~~~~~~~-----~g~~~vi~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
....+++|+|+|..|...+..+ ...+.++|.+..+++++.+.+.+ ++.. +...+ +..+.+ ...
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~-----~~~~~~-----~~a 193 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN-----SADEAI-----EEA 193 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC-----CHHHHH-----hcC
Confidence 4567899999999998777554 45687799999999888765432 3432 22222 233333 258
Q ss_pred cEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 212 DYCFECVGLASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 212 d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
|+|+.|.++.+. ... ..++++ -+++.+|...
T Consensus 194 DiVi~aT~s~~p-~i~-~~l~~G-~hV~~iGs~~ 224 (325)
T PRK08618 194 DIIVTVTNAKTP-VFS-EKLKKG-VHINAVGSFM 224 (325)
T ss_pred CEEEEccCCCCc-chH-HhcCCC-cEEEecCCCC
Confidence 999999988763 334 889997 8888888754
No 300
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=95.92 E-value=0.023 Score=49.39 Aligned_cols=108 Identities=17% Similarity=0.266 Sum_probs=67.0
Q ss_pred hhhhhcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHh----cCCcE-E-EcCCCCCCccHHHH
Q 020435 130 AAWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKR----FGVTE-F-VNSKNCGDKSVSQI 202 (326)
Q Consensus 130 ~l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~~----~g~~~-v-i~~~~~~~~~~~~~ 202 (326)
.+...+++++|++|+=-|.|+ |.+...+++..| .++|+..+..+++.+.+++ .|... + +...+...+.+.+
T Consensus 31 ~I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~Dv~~~g~~~- 108 (247)
T PF08704_consen 31 YILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRDVCEEGFDE- 108 (247)
T ss_dssp HHHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES-GGCG--ST-
T ss_pred HHHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecceecccccc-
Confidence 356678999999999987655 666677777765 3489999999988776643 45431 1 2121100111211
Q ss_pred HHHhcCCCccEEE-EcCCcHHHHHHHHHHh-hcCCcEEEEecc
Q 020435 203 IIDMTDGGADYCF-ECVGLASLVQEAYACC-RKGWGKTIVLGV 243 (326)
Q Consensus 203 i~~~~~~g~d~v~-d~~g~~~~~~~~~~~l-~~~~G~~v~~g~ 243 (326)
-....+|.|| |-..--..+..+.+.| +++ |+++.+..
T Consensus 109 ---~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP 147 (247)
T PF08704_consen 109 ---ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP 147 (247)
T ss_dssp ---T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred ---cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence 1112789997 7666666689999999 898 99999864
No 301
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.92 E-value=0.031 Score=47.21 Aligned_cols=106 Identities=16% Similarity=0.010 Sum_probs=61.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.+.+|||+|+|.+|...++.+...|+ +|+++..... ....+.+.+.-. ..... +.+.- + .++|+||-|
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~-----~~~~~--l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE-----FEPSD--I--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC-----CChhh--c--CCceEEEEc
Confidence 47899999999999999988888998 8888875432 112221222111 11111 11100 0 279999999
Q ss_pred CCcHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHHh
Q 020435 218 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLH 259 (326)
Q Consensus 218 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~ 259 (326)
.+.+. ....+...... +.++..... .....|-...+..
T Consensus 78 T~d~e-lN~~i~~~a~~-~~lvn~~d~--~~~~~f~~Pa~~~ 115 (202)
T PRK06718 78 TNDPR-VNEQVKEDLPE-NALFNVITD--AESGNVVFPSALH 115 (202)
T ss_pred CCCHH-HHHHHHHHHHh-CCcEEECCC--CccCeEEEeeEEE
Confidence 99998 55444444454 555555432 2334444444443
No 302
>PRK06114 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.057 Score=47.01 Aligned_cols=81 Identities=15% Similarity=0.232 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HH----HHHhcCCc-EEEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~-~~----~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ +++|.++++.+...|+ +|+.++++.++ .+ .++..+.. ..+..+-.+.++..+.+.+... +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4679999987 8999999999999999 89999876532 22 22333422 2222111012333333333322 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 303
>PRK08703 short chain dehydrogenase; Provisional
Probab=95.91 E-value=0.035 Score=47.83 Aligned_cols=81 Identities=23% Similarity=0.287 Sum_probs=51.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCC-c-EE--EcCCCCCCcc---HHHHHHHh
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGV-T-EF--VNSKNCGDKS---VSQIIIDM 206 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~-~-~v--i~~~~~~~~~---~~~~i~~~ 206 (326)
++.+++|+|+ |.+|..+++.+...|. +|+++++++++.+.+. +.+. + .. .|..+....+ +.+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 3679999987 9999999999988999 8999999887665432 2221 1 11 2221100122 23334443
Q ss_pred cCCCccEEEEcCCc
Q 020435 207 TDGGADYCFECVGL 220 (326)
Q Consensus 207 ~~~g~d~v~d~~g~ 220 (326)
..+.+|++|.+++.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 43478999998884
No 304
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=95.90 E-value=0.06 Score=46.93 Aligned_cols=80 Identities=26% Similarity=0.381 Sum_probs=51.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-EEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+.+ ++.. ..+..+-.+.++..+.+.+... +++|++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578999987 9999999999998999 99999998887665433 3321 2222111011233333333321 379999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
+.+.+.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998763
No 305
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.90 E-value=0.047 Score=47.60 Aligned_cols=80 Identities=20% Similarity=0.256 Sum_probs=49.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-h----cCC--cEEEcCCCCCCccHHHHHHHhcC--C
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-R----FGV--TEFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~----~g~--~~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.+. + .+. -+.+..+-....+..+.+.+... +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999987 8999999999888899 9999998876654432 1 221 12222221011222222333221 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++++.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 79999998873
No 306
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.90 E-value=0.056 Score=47.88 Aligned_cols=102 Identities=17% Similarity=0.229 Sum_probs=64.5
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHH-HhcCCcEEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~~---~~~~~-~~~g~~~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.++++++ +.+.+ .+++....+ |..+ .++..+.+.+...
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~i~~~ 80 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK--PEHFKSLAESLKKD 80 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC--HHHHHHHHHHHHHH
Confidence 4689999986 4899999999888999 8999888753 22322 334533332 3322 2233333333322
Q ss_pred -CCccEEEEcCCcH-----------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 020435 209 -GGADYCFECVGLA-----------------------------SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 209 -~g~d~v~d~~g~~-----------------------------~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+++|++++++|.. ...+..+..+..+ |+++.++..
T Consensus 81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~ 145 (274)
T PRK08415 81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYL 145 (274)
T ss_pred cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecC
Confidence 3899999988731 0234455667777 899888754
No 307
>PRK08589 short chain dehydrogenase; Validated
Probab=95.89 E-value=0.05 Score=48.02 Aligned_cols=79 Identities=24% Similarity=0.332 Sum_probs=49.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-EE--EcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EF--VNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~---~g~~-~v--i~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ +++|.++++.+...|+ +|++++++++..+.+.+ .+.. .. .|..+ ..+..+.+.+... +
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g 81 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD--EQQVKDFASEIKEQFG 81 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHHHcC
Confidence 4679999987 8999999998888999 99999988332222322 2321 22 23222 1223333333322 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++++++|.
T Consensus 82 ~id~li~~Ag~ 92 (272)
T PRK08589 82 RVDVLFNNAGV 92 (272)
T ss_pred CcCEEEECCCC
Confidence 79999998864
No 308
>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]
Probab=95.89 E-value=0.11 Score=46.07 Aligned_cols=99 Identities=13% Similarity=0.134 Sum_probs=65.3
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCcEEEcCCCC---CCccHHHHHHHhcCCCccEEE-
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNC---GDKSVSQIIIDMTDGGADYCF- 215 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g~~~vi~~~~~---~~~~~~~~i~~~~~~g~d~v~- 215 (326)
.+|||+|.|. |-.+-.++|+...+++++++.+++=.++++++ +..+....+.. .-++-.+.+++... ++|+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999997654 55566778887777999999999888888763 21110000000 00222334444322 899997
Q ss_pred EcCCc---------HHHHHHHHHHhhcCCcEEEEec
Q 020435 216 ECVGL---------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 216 d~~g~---------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+... .+.++.+-++|+++ |.++.-+
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q~ 190 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQA 190 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEec
Confidence 66554 56789999999999 9998874
No 309
>PLN02823 spermine synthase
Probab=95.87 E-value=0.086 Score=48.09 Aligned_cols=101 Identities=18% Similarity=0.136 Sum_probs=62.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-Cc-EEEcCCCC--CCccHHHHHHHhcCCCccEE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-VT-EFVNSKNC--GDKSVSQIIIDMTDGGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g-~~-~vi~~~~~--~~~~~~~~i~~~~~~g~d~v 214 (326)
...+|||+|+|. |..+..+++..+..+|++++.+++-.+.+++.- .. ..++.... -..+-.+.+++ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 467999998764 555667778766668999999999888887632 10 01110000 00222334432 33489999
Q ss_pred E-EcCC-----------cHHHHH-HHHHHhhcCCcEEEEec
Q 020435 215 F-ECVG-----------LASLVQ-EAYACCRKGWGKTIVLG 242 (326)
Q Consensus 215 ~-d~~g-----------~~~~~~-~~~~~l~~~~G~~v~~g 242 (326)
| |+.. +...++ .+.+.|+++ |.++.-.
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~ 220 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA 220 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence 8 6432 223465 788899998 9887653
No 310
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.86 E-value=0.058 Score=46.99 Aligned_cols=79 Identities=24% Similarity=0.409 Sum_probs=50.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCc-EEE--cCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~--~~~~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g 210 (326)
++.++||+|+ +++|.++++.+...|+ +|+++.++... .+.++..+.+ +.+ |..+ .+++.+.+.+... ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ--QKDIDSIVSQAVEVMGH 83 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC--HHHHHHHHHHHHHHcCC
Confidence 4789999987 8999999999999999 89888775432 2233444432 122 3222 2333333333321 37
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++++.|.
T Consensus 84 iD~lv~~ag~ 93 (251)
T PRK12481 84 IDILINNAGI 93 (251)
T ss_pred CCEEEECCCc
Confidence 9999998874
No 311
>PRK12937 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.22 Score=42.85 Aligned_cols=81 Identities=16% Similarity=0.117 Sum_probs=48.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HH----HHHhcCCc-EEEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FE----IGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~-~~----~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+.++.+. .+ .++..+.. +.+..+-...+++.+.+.+... +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4679999987 9999999999999999 78777654332 22 22333422 2222221011223333333221 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++|.++|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 312
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=95.85 E-value=0.057 Score=48.96 Aligned_cols=78 Identities=21% Similarity=0.198 Sum_probs=50.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC---Cc-EEE--cCCCCCCccHHHHHHHhc--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG---VT-EFV--NSKNCGDKSVSQIIIDMT--D 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g---~~-~vi--~~~~~~~~~~~~~i~~~~--~ 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ .++. .. .++ |..+ ..++.+.+.+.. .
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 81 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD--LDSVRRFVDDFRALG 81 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 9999999998888898 999999988776543 2231 11 122 2222 122222233321 2
Q ss_pred CCccEEEEcCC
Q 020435 209 GGADYCFECVG 219 (326)
Q Consensus 209 ~g~d~v~d~~g 219 (326)
+++|++|+++|
T Consensus 82 ~~iD~li~nAg 92 (322)
T PRK07453 82 KPLDALVCNAA 92 (322)
T ss_pred CCccEEEECCc
Confidence 26999999887
No 313
>PRK12367 short chain dehydrogenase; Provisional
Probab=95.85 E-value=0.072 Score=46.38 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=47.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCcEEE--cCCCCCCccHHHHHHHhcCCCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFV--NSKNCGDKSVSQIIIDMTDGGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~-~~~~~~~~g~~~vi--~~~~~~~~~~~~~i~~~~~~g~d~v 214 (326)
.+.++||+|+ |++|..+++.+...|. +|+++++++. ..+... .+....+ |..+ .+.+.+.. +++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~------~~~~~~~~-~~iDil 83 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWECGK------EESLDKQL-ASLDVL 83 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeCCC------HHHHHHhc-CCCCEE
Confidence 3679999987 8999999999988999 9999988762 222211 1111222 2222 12333333 379999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
++++|.
T Consensus 84 VnnAG~ 89 (245)
T PRK12367 84 ILNHGI 89 (245)
T ss_pred EECCcc
Confidence 999874
No 314
>PRK06101 short chain dehydrogenase; Provisional
Probab=95.84 E-value=0.071 Score=46.04 Aligned_cols=42 Identities=19% Similarity=0.155 Sum_probs=35.5
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF 183 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~ 183 (326)
.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~ 44 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQ 44 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHh
Confidence 47899987 9999998888888999 899999998887766543
No 315
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.84 E-value=0.18 Score=42.69 Aligned_cols=93 Identities=17% Similarity=0.163 Sum_probs=61.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.|.+|||+|+|.+|..-++.+...|+ +|++++.... ....+.+.|.-..+.. + +.... + .++|+||-+
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~~-~-----~~~~d--l--~~~~lVi~a 76 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLAR-C-----FDADI--L--EGAFLVIAA 76 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEeC-C-----CCHHH--h--CCcEEEEEC
Confidence 46799999999999999999999999 8888875443 2233333332122221 1 11111 1 279999999
Q ss_pred CCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 218 VGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 218 ~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.+.+..-.......+.. |..+....
T Consensus 77 t~d~~ln~~i~~~a~~~-~ilvn~~d 101 (205)
T TIGR01470 77 TDDEELNRRVAHAARAR-GVPVNVVD 101 (205)
T ss_pred CCCHHHHHHHHHHHHHc-CCEEEECC
Confidence 99986456667677776 77776543
No 316
>PLN03139 formate dehydrogenase; Provisional
Probab=95.84 E-value=0.076 Score=49.34 Aligned_cols=90 Identities=19% Similarity=0.170 Sum_probs=59.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.|.+|.|+|.|.||..+++.++.+|. +|++.+++....+.....|+..+ .++.+.+. ..|+|+-+.
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~--------~~l~ell~-----~sDvV~l~l 263 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE--------EDLDAMLP-----KCDVVVINT 263 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec--------CCHHHHHh-----hCCEEEEeC
Confidence 47899999999999999999999999 99999877544444444554211 12333222 378887555
Q ss_pred Cc-HH----HHHHHHHHhhcCCcEEEEecc
Q 020435 219 GL-AS----LVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 219 g~-~~----~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.. +. +-...+..++++ ..+|.++.
T Consensus 264 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 292 (386)
T PLN03139 264 PLTEKTRGMFNKERIAKMKKG-VLIVNNAR 292 (386)
T ss_pred CCCHHHHHHhCHHHHhhCCCC-eEEEECCC
Confidence 53 22 112456677776 66666654
No 317
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.84 E-value=0.039 Score=49.16 Aligned_cols=76 Identities=13% Similarity=0.023 Sum_probs=51.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-EEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~-~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
++.++||+|+|+.+.+++..+...|+.+|+++.|+.++.+.+ ..++.. .+.... ..+.+.... ..+|+||+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~------~~~~~~~~~-~~~DiVIn 196 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE------GDSGGLAIE-KAAEVLVS 196 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc------chhhhhhcc-cCCCEEEE
Confidence 477999999999999999999999987899999998887665 334321 111111 001111111 26999999
Q ss_pred cCCcH
Q 020435 217 CVGLA 221 (326)
Q Consensus 217 ~~g~~ 221 (326)
|.+..
T Consensus 197 aTp~g 201 (282)
T TIGR01809 197 TVPAD 201 (282)
T ss_pred CCCCC
Confidence 98754
No 318
>PRK08317 hypothetical protein; Provisional
Probab=95.83 E-value=0.13 Score=44.15 Aligned_cols=102 Identities=27% Similarity=0.395 Sum_probs=68.6
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHHhc----CC-cEEEcCCCCCCccHHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGKRF----GV-TEFVNSKNCGDKSVSQIII 204 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~~~----g~-~~vi~~~~~~~~~~~~~i~ 204 (326)
+.+...+.++++||..|+|. |..+..+++..+ ..++++++.+++..+.+++. +. ..++..+. .++
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~---~~~----- 81 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA---DGL----- 81 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc---ccC-----
Confidence 45667788899999999876 888888888763 23899999999888877654 11 11221111 110
Q ss_pred HhcCCCccEEEEcC------CcHHHHHHHHHHhhcCCcEEEEec
Q 020435 205 DMTDGGADYCFECV------GLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 205 ~~~~~g~d~v~d~~------g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
....+.+|+|+... .-...+..+.++|+++ |.++...
T Consensus 82 ~~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~ 124 (241)
T PRK08317 82 PFPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD 124 (241)
T ss_pred CCCCCCceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence 11223799987432 2234578999999998 9998765
No 319
>PRK10258 biotin biosynthesis protein BioC; Provisional
Probab=95.83 E-value=0.49 Score=41.20 Aligned_cols=99 Identities=14% Similarity=0.226 Sum_probs=63.5
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-cEEEcCCCCCCccHHHHHHHhcCCCc
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
+.....++.+||-+|+|. |..+..+++ .+. .|++++.+++..+.+++... ..++..+- .++ ...++.+
T Consensus 36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~~d~---~~~-----~~~~~~f 104 (251)
T PRK10258 36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLAGDI---ESL-----PLATATF 104 (251)
T ss_pred HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEEcCc---ccC-----cCCCCcE
Confidence 334444678999999875 655555554 576 99999999999888876432 22222111 110 1112279
Q ss_pred cEEEEcCC------cHHHHHHHHHHhhcCCcEEEEecc
Q 020435 212 DYCFECVG------LASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 212 d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
|+|+.... -...+..+.+.|+++ |.++....
T Consensus 105 D~V~s~~~l~~~~d~~~~l~~~~~~Lk~g-G~l~~~~~ 141 (251)
T PRK10258 105 DLAWSNLAVQWCGNLSTALRELYRVVRPG-GVVAFTTL 141 (251)
T ss_pred EEEEECchhhhcCCHHHHHHHHHHHcCCC-eEEEEEeC
Confidence 99986432 234577889999998 99987754
No 320
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.82 E-value=0.059 Score=46.52 Aligned_cols=81 Identities=19% Similarity=0.211 Sum_probs=50.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH----HHhcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~----~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
.+.+|||+|+ |.+|..+++.+...|. +|++++++.++.+. ++..+.. .++..+-.+..++.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999987 9999999998888898 99999998655433 2333322 2222111011223333333221 27
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|.++.+.+.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 9999998754
No 321
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.82 E-value=0.058 Score=47.72 Aligned_cols=80 Identities=19% Similarity=0.291 Sum_probs=48.8
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh---HHHHH-HhcCCcEEEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE---KFEIG-KRFGVTEFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~~---~~~~~-~~~g~~~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.+.++++ +.+.+ ++++....+..+-.+.++..+.+.+... +
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 5689999986 5899999999999999 8988877642 23322 3345322222211012233333333322 3
Q ss_pred CccEEEEcCC
Q 020435 210 GADYCFECVG 219 (326)
Q Consensus 210 g~d~v~d~~g 219 (326)
++|++++++|
T Consensus 88 ~iD~lv~nAG 97 (272)
T PRK08159 88 KLDFVVHAIG 97 (272)
T ss_pred CCcEEEECCc
Confidence 7999999876
No 322
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=95.82 E-value=0.11 Score=42.04 Aligned_cols=88 Identities=18% Similarity=0.184 Sum_probs=55.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.|.+|||.|+|.+|.--++.+...|+ +|++++ ++..+.+++++.-.. ....+...++ .++|+|+-+.
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~~~~~dl---------~~a~lViaaT 78 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKTFSNDDI---------KDAHLIYAAT 78 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-EecccChhcC---------CCceEEEECC
Confidence 47899999999999998888888998 888874 443344444542111 1111111111 2799999999
Q ss_pred CcHHHHHHHHHHhhcCCcEEEEe
Q 020435 219 GLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 219 g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
++.. .+..+...... +.++..
T Consensus 79 ~d~e-~N~~i~~~a~~-~~~vn~ 99 (157)
T PRK06719 79 NQHA-VNMMVKQAAHD-FQWVNV 99 (157)
T ss_pred CCHH-HHHHHHHHHHH-CCcEEE
Confidence 9988 55555555444 434443
No 323
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.81 E-value=0.069 Score=49.70 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=65.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.+.++||+|+|-+|..++..+...|..++++..|+.++.+. ++++|+. ++..++ +.+.+. .+|+||.+
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~e-----l~~~l~-----~~DvViss 245 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALEE-----LLEALA-----EADVVISS 245 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHHH-----HHHhhh-----hCCEEEEe
Confidence 67899999999999999999999998799999999988764 6778853 332222 222222 59999999
Q ss_pred CCcHHH---HHHHHHHhhcCCc-EEEEeccC
Q 020435 218 VGLASL---VQEAYACCRKGWG-KTIVLGVD 244 (326)
Q Consensus 218 ~g~~~~---~~~~~~~l~~~~G-~~v~~g~~ 244 (326)
.+.++. -....+.++.... -++.++.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavP 276 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVP 276 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCC
Confidence 888652 2244445555412 34556553
No 324
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=95.80 E-value=0.065 Score=46.66 Aligned_cols=81 Identities=19% Similarity=0.304 Sum_probs=49.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCc-EEEcCCCCCCccHHHHHHHhcC--CCcc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGAD 212 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~--~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d 212 (326)
.+.++||+|+ |++|.++++.+...|+ +|+.+++.... .+.+++.+.+ +.+..+-.+.++..+.+.+... +++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3679999987 8999999999988999 88888764322 2334444422 2222221012333333333322 3799
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99998874
No 325
>PRK07985 oxidoreductase; Provisional
Probab=95.79 E-value=0.15 Score=45.65 Aligned_cols=102 Identities=21% Similarity=0.169 Sum_probs=61.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~--~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
.+.++||+|+ |.+|.++++.+...|+ +|+.+.++. +..+.+ +..+.. +.+ |..+ .++..+.+.+...
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~ 124 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD--EKFARSLVHEAHK 124 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC--HHHHHHHHHHHHH
Confidence 4679999987 8999999999999999 888876543 222222 223422 122 2222 1233333333322
Q ss_pred --CCccEEEEcCCcH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 020435 209 --GGADYCFECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 209 --~g~d~v~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
+++|+++.+.|.. ...+.+...++.+ |++|.++..
T Consensus 125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~ 187 (294)
T PRK07985 125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSI 187 (294)
T ss_pred HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCc
Confidence 3799999887631 1233444555677 899988753
No 326
>PRK07574 formate dehydrogenase; Provisional
Probab=95.79 E-value=0.077 Score=49.33 Aligned_cols=90 Identities=21% Similarity=0.208 Sum_probs=58.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.|.+|.|+|.|.||..+++.++.+|. +|++.+++....+..+.+++... .++.+.+. ..|+|+-+.
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~~--------~~l~ell~-----~aDvV~l~l 256 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTYH--------VSFDSLVS-----VCDVVTIHC 256 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCceec--------CCHHHHhh-----cCCEEEEcC
Confidence 46799999999999999999999999 99999987644444444443211 12222221 478887655
Q ss_pred Cc-HHH----HHHHHHHhhcCCcEEEEecc
Q 020435 219 GL-ASL----VQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 219 g~-~~~----~~~~~~~l~~~~G~~v~~g~ 243 (326)
.. +.+ -...+..|+++ ..+|.++.
T Consensus 257 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 285 (385)
T PRK07574 257 PLHPETEHLFDADVLSRMKRG-SYLVNTAR 285 (385)
T ss_pred CCCHHHHHHhCHHHHhcCCCC-cEEEECCC
Confidence 53 221 12456677776 66666654
No 327
>PRK05876 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.07 Score=47.24 Aligned_cols=79 Identities=25% Similarity=0.300 Sum_probs=51.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhc--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--D 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~--~ 208 (326)
.+.++||+|+ |++|.++++.+...|+ +|+++++++++.+.+ +..+.+ ..+ |..+ .+++.+.+.+.. -
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~ 81 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRH--REEVTHLADEAFRLL 81 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCC--HHHHHHHHHHHHHHc
Confidence 4678999987 8999999999999999 899999887665543 223432 122 2222 122333232221 1
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++++.|.
T Consensus 82 g~id~li~nAg~ 93 (275)
T PRK05876 82 GHVDVVFSNAGI 93 (275)
T ss_pred CCCCEEEECCCc
Confidence 379999998873
No 328
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=95.78 E-value=0.066 Score=46.45 Aligned_cols=77 Identities=16% Similarity=0.278 Sum_probs=51.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCc-EEE--cCCCCCCccHHHHHHHhcC--CCccE
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVT-EFV--NSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
.+++|+|+ |.+|..+++.+...|+ +|+++++++++.+.+.. ++.+ ..+ |..+ .+++.+.+.+... +++|+
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~id~ 77 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN--RAAIEEMLASLPAEWRNIDV 77 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 36899987 9999999999988999 99999999887765543 3432 122 2222 1223333333222 37999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
++.++|.
T Consensus 78 vi~~ag~ 84 (248)
T PRK10538 78 LVNNAGL 84 (248)
T ss_pred EEECCCc
Confidence 9988764
No 329
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.77 E-value=0.065 Score=46.11 Aligned_cols=81 Identities=21% Similarity=0.284 Sum_probs=51.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
.+.++||+|+ |.+|..++..+...|. +|+.+++++++.+.+ +..+.. .++..+-.+..++.+.+++... ++
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS 84 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 8999999998888999 999999987765543 223322 1222221011233333433322 27
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++|.+.|.
T Consensus 85 id~vi~~ag~ 94 (239)
T PRK07666 85 IDILINNAGI 94 (239)
T ss_pred ccEEEEcCcc
Confidence 9999998864
No 330
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=95.76 E-value=0.35 Score=43.06 Aligned_cols=60 Identities=23% Similarity=0.257 Sum_probs=46.2
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEc---CChhHHHHHHhcCCcEEEcCC
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVD---VISEKFEIGKRFGVTEFVNSK 192 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~---~~~~~~~~~~~~g~~~vi~~~ 192 (326)
.+...+++|.+|+---+|++|.+++.+|+..|. +++.+. .|.++.+.++.+|++.+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy-~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGY-RLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCC-cEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 345568999865544469999999999999999 666665 477888899999997666555
No 331
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.76 E-value=0.034 Score=49.47 Aligned_cols=94 Identities=17% Similarity=0.114 Sum_probs=60.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.+.+++|+|+|++|.+++..+...|+.+|+++.|+.++.+.+. .++....+.. + .+..+.+ ..+|+|++|
T Consensus 122 ~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~---~~~~~~~-----~~~DivIna 192 (278)
T PRK00258 122 KGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D---LELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c---ccchhcc-----ccCCEEEEC
Confidence 5679999999999999999999999559999999988876553 3432110111 1 0110111 269999999
Q ss_pred CCcHHH-----HHHHHHHhhcCCcEEEEec
Q 020435 218 VGLASL-----VQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 218 ~g~~~~-----~~~~~~~l~~~~G~~v~~g 242 (326)
...... .......+.+. ..++.+-
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Div 221 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMI 221 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence 875431 01223566776 6666663
No 332
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.76 E-value=0.05 Score=43.50 Aligned_cols=96 Identities=22% Similarity=0.231 Sum_probs=60.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-HHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI-GKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~-~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
.++.+++|+|+|.+|..+++.+...|..+|+++++++++.+. .++++... +.... .+..+. -+++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~---~~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAY---LDLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceee---cchhhc-----cccCCEEEe
Confidence 457899999999999999988888863389999998887665 44455321 00000 111111 137999999
Q ss_pred cCCcHHH----HHHHHHHhhcCCcEEEEecc
Q 020435 217 CVGLASL----VQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 217 ~~g~~~~----~~~~~~~l~~~~G~~v~~g~ 243 (326)
|++.... .......++++ ..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCc
Confidence 9887541 11223446676 66666654
No 333
>PRK06701 short chain dehydrogenase; Provisional
Probab=95.76 E-value=0.21 Score=44.64 Aligned_cols=81 Identities=20% Similarity=0.147 Sum_probs=48.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHH----HHhcCCcE-EEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~-~~~----~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+.++.++ .+. ++..+... ++..+-.+...+.+.+.+... +
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4779999987 8999999998888899 89988876432 222 22233322 222211011222233333222 2
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++|.+++.
T Consensus 124 ~iD~lI~~Ag~ 134 (290)
T PRK06701 124 RLDILVNNAAF 134 (290)
T ss_pred CCCEEEECCcc
Confidence 79999988774
No 334
>PRK07856 short chain dehydrogenase; Provisional
Probab=95.75 E-value=0.053 Score=47.14 Aligned_cols=77 Identities=16% Similarity=0.188 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcE-EEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.+++++++. .....+.. ..|..+ ..++.+.+.+... +.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~~--~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPET--VDGRPAEFHAADVRD--PDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhhh--hcCCceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999987 8999999999988999 999999876551 11111211 122222 1223333333321 378999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
|.+.|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 998873
No 335
>PRK08226 short chain dehydrogenase; Provisional
Probab=95.74 E-value=0.069 Score=46.69 Aligned_cols=79 Identities=25% Similarity=0.325 Sum_probs=49.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh---cCCc-EEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR---FGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~---~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+.++++.+..+...+ .+.. ..+ |..+ ..++.+.+.+... +
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~~ 81 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD--PASVAAAIKRAKEKEG 81 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC--HHHHHHHHHHHHHHcC
Confidence 4679999987 9999999999988999 89999988754333322 2322 122 2222 1222222332221 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
.+|++|.+.+.
T Consensus 82 ~id~vi~~ag~ 92 (263)
T PRK08226 82 RIDILVNNAGV 92 (263)
T ss_pred CCCEEEECCCc
Confidence 79999998883
No 336
>PRK06398 aldose dehydrogenase; Validated
Probab=95.74 E-value=0.036 Score=48.49 Aligned_cols=75 Identities=20% Similarity=0.222 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcC--CCccEEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD--GGADYCF 215 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~--~g~d~v~ 215 (326)
.+.++||+|+ |.+|.++++.+...|+ +|+.+++++++...+.. ...|..+ .+++.+.+.+... +++|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~----~~~D~~~--~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYNDVDY----FKVDVSN--KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccCceEE----EEccCCC--HHHHHHHHHHHHHHcCCCCEEE
Confidence 3679999987 8999999999999999 99999887654321100 1123222 1233333333322 2799999
Q ss_pred EcCCc
Q 020435 216 ECVGL 220 (326)
Q Consensus 216 d~~g~ 220 (326)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
No 337
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.72 E-value=0.099 Score=46.37 Aligned_cols=83 Identities=22% Similarity=0.285 Sum_probs=60.0
Q ss_pred hhhhccc-CCCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcC
Q 020435 131 AWRTANV-EVGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 131 l~~~~~~-~~~~~vlI~Gag-~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
+++..++ -.|.+|+|+|.| .+|.-+++++...|+ +|+...+.. .++.+.++
T Consensus 148 ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t----------------------~~l~~~~~---- 200 (286)
T PRK14175 148 ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS----------------------KDMASYLK---- 200 (286)
T ss_pred HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc----------------------hhHHHHHh----
Confidence 3344433 368999999985 599999999999999 888776432 12222222
Q ss_pred CCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 209 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 209 ~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.+|+||.++|.+..+.. +.++++ ..+|.+|..
T Consensus 201 -~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~ 232 (286)
T PRK14175 201 -DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNT 232 (286)
T ss_pred -hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCC
Confidence 48999999999875554 458887 888888864
No 338
>PRK06720 hypothetical protein; Provisional
Probab=95.70 E-value=0.097 Score=42.82 Aligned_cols=81 Identities=22% Similarity=0.183 Sum_probs=49.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhc--CCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~--~~g 210 (326)
++.+++|+|+ +++|..++..+...|+ +|+.++++.+..+.. +..+.. ..+..+-....++.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4779999987 7999999998888898 899999887655332 223432 222222100122222222221 137
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++++++|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 8999988774
No 339
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=95.70 E-value=0.14 Score=40.50 Aligned_cols=32 Identities=28% Similarity=0.453 Sum_probs=28.3
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
+|+|.|+|++|..+++.+...|.+++..++.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 58999999999999999999998888888754
No 340
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=95.70 E-value=0.072 Score=46.23 Aligned_cols=81 Identities=21% Similarity=0.246 Sum_probs=50.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHHhc--CCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMT--DGG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi~~~~~~~~~~~~~i~~~~--~~g 210 (326)
++.++||+|+ |.+|..+++.+...|. +|+++++++++.+.+. ..+.. +.+.-+-....++.+.+.+.. .++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3579999987 9999999999888899 9999999887655432 22322 222211101122222233222 137
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++|.+++.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999998873
No 341
>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed
Probab=95.70 E-value=0.048 Score=46.30 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=64.0
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcE--EEcCCCCCCccHHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQIII 204 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i~ 204 (326)
+....+++++++||-.|+|. |..+..+++.. . +|++++.+++..+.+++ .+.+. ++..+. .+
T Consensus 70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~------~~--- 137 (212)
T PRK00312 70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDG------WK--- 137 (212)
T ss_pred HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCc------cc---
Confidence 45667888999999998765 55555566554 3 89999999887666543 34332 222211 11
Q ss_pred HhcC-CCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 205 DMTD-GGADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 205 ~~~~-~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.+.. +.+|+|+...........+.+.|+++ |+++..-
T Consensus 138 ~~~~~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~ 175 (212)
T PRK00312 138 GWPAYAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV 175 (212)
T ss_pred CCCcCCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence 1111 37999985545455467888999998 9987653
No 342
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.70 E-value=0.076 Score=46.69 Aligned_cols=78 Identities=15% Similarity=0.221 Sum_probs=47.8
Q ss_pred CCCEEEEEcc-C--HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcEEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-G--SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g--~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ + ++|.++++.+...|+ +|+.+++++...+.+++ .+....+ |-.+ .+++.+.+.+...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~ 81 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE--DASIDAMFAELGKV 81 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC--HHHHHHHHHHHHhh
Confidence 4679999987 3 799999998888999 89888876422222222 2322222 2222 2333333333322
Q ss_pred -CCccEEEEcCC
Q 020435 209 -GGADYCFECVG 219 (326)
Q Consensus 209 -~g~d~v~d~~g 219 (326)
+.+|++++++|
T Consensus 82 ~g~iD~linnAg 93 (262)
T PRK07984 82 WPKFDGFVHSIG 93 (262)
T ss_pred cCCCCEEEECCc
Confidence 37999999887
No 343
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.69 E-value=0.073 Score=46.33 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=50.4
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC--cEEEcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV--TEFVNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~--~~vi~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
+.++||+|+ |.+|..++..+...|+ +|++++++.++.+.+. .+.. -+.+..+-.+.+++.+.+.+... +++|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 458999987 8999999998888898 8999999887765443 2221 12222221011223333333322 26999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
++.+.+.
T Consensus 81 vi~~ag~ 87 (257)
T PRK07074 81 LVANAGA 87 (257)
T ss_pred EEECCCC
Confidence 9998874
No 344
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.69 E-value=0.16 Score=44.42 Aligned_cols=97 Identities=23% Similarity=0.151 Sum_probs=67.6
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcC-
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~-g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~- 208 (326)
+.......++++||-+|+|. |..+..+++.. +. +|++++.+++..+.+++.+.+ ++.. +.. ++..
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~-~~~~------d~~----~~~~~ 87 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVD-ARTG------DVR----DWKPK 87 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCc-EEEc------Chh----hCCCC
Confidence 44556667889999999866 66777777765 55 899999999988888776543 2221 111 1222
Q ss_pred CCccEEEEcCC-----c-HHHHHHHHHHhhcCCcEEEEe
Q 020435 209 GGADYCFECVG-----L-ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 209 ~g~d~v~d~~g-----~-~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+.+|+|+.... . ...+..+.+.|+++ |.++..
T Consensus 88 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~ 125 (255)
T PRK14103 88 PDTDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ 125 (255)
T ss_pred CCceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence 38999986332 2 34577889999998 998875
No 345
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=95.68 E-value=0.084 Score=45.93 Aligned_cols=79 Identities=18% Similarity=0.305 Sum_probs=51.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++.+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++.+.. ..+ |..+ ..++.+.+.+...
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD--EEAVAAAFARIDAEH 86 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHhc
Confidence 4789999987 8999999998888899 999999987765443 233421 222 2222 1233333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|.++.+.+.
T Consensus 87 ~~id~vi~~ag~ 98 (256)
T PRK06124 87 GRLDILVNNVGA 98 (256)
T ss_pred CCCCEEEECCCC
Confidence 378999998884
No 346
>PRK01683 trans-aconitate 2-methyltransferase; Provisional
Probab=95.68 E-value=0.16 Score=44.43 Aligned_cols=100 Identities=19% Similarity=0.164 Sum_probs=66.7
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-cEEEcCCCCCCccHHHHHHHhcCC
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-TEFVNSKNCGDKSVSQIIIDMTDG 209 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~-~~vi~~~~~~~~~~~~~i~~~~~~ 209 (326)
+.....+.++++||-+|+|. |..+..+++..+..+|++++.+++..+.+++.-. ..++..+ .. .+...
T Consensus 23 ll~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d------~~----~~~~~ 91 (258)
T PRK01683 23 LLARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD------IA----SWQPP 91 (258)
T ss_pred HHhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc------hh----ccCCC
Confidence 34455667889999999865 6667778877643399999999988887765321 1222221 11 12223
Q ss_pred -CccEEEEcCC------cHHHHHHHHHHhhcCCcEEEEec
Q 020435 210 -GADYCFECVG------LASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 210 -g~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.+|+|+.... ....++.+.+.|+++ |.++...
T Consensus 92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~~ 130 (258)
T PRK01683 92 QALDLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQM 130 (258)
T ss_pred CCccEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEEC
Confidence 8999985433 234588899999998 9988753
No 347
>PRK08264 short chain dehydrogenase; Validated
Probab=95.67 E-value=0.059 Score=46.31 Aligned_cols=75 Identities=19% Similarity=0.210 Sum_probs=48.7
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-EEE--cCCCCCCccHHHHHHHhcCCCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTDGGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~~g~d~v 214 (326)
.+.++||+|+ |.+|..+++.+...|..+|++++++.++.+. .+.. +++ |..+ .+++.+.+.. . +.+|++
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~--~~~~~~~~~~-~-~~id~v 77 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTD--PASVAAAAEA-A-SDVTIL 77 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCC--HHHHHHHHHh-c-CCCCEE
Confidence 4678999987 9999999999988897579999988766543 2211 222 2222 1222222222 1 268999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
|.+.+.
T Consensus 78 i~~ag~ 83 (238)
T PRK08264 78 VNNAGI 83 (238)
T ss_pred EECCCc
Confidence 998876
No 348
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.67 E-value=0.061 Score=51.59 Aligned_cols=78 Identities=24% Similarity=0.341 Sum_probs=54.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh---------------------hHHHHHHhcCCcEEEcCCCCCCc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS---------------------EKFEIGKRFGVTEFVNSKNCGDK 197 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~---------------------~~~~~~~~~g~~~vi~~~~~~~~ 197 (326)
++++|+|+|+|+.|+.++..++..|. +|++++..+ ...++++++|++..++..- ..
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v--~~ 216 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEV--GR 216 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEe--CC
Confidence 57899999999999999999999999 888887654 2345677888865554321 01
Q ss_pred cHHHHHHHhcCCCccEEEEcCCcHH
Q 020435 198 SVSQIIIDMTDGGADYCFECVGLAS 222 (326)
Q Consensus 198 ~~~~~i~~~~~~g~d~v~d~~g~~~ 222 (326)
++ .+.... .++|.||.+.|...
T Consensus 217 ~~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 DI--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred cc--CHHHHH-hcCCEEEEEeCCCC
Confidence 11 111111 26999999999753
No 349
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=95.67 E-value=0.036 Score=46.88 Aligned_cols=101 Identities=18% Similarity=0.268 Sum_probs=66.3
Q ss_pred hcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHH
Q 020435 134 TANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIID 205 (326)
Q Consensus 134 ~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~ 205 (326)
..+.....+||-+|.+. |+.++.+|+.++. .+|+.++.+++..+.+++ .|.. +++. .+..+.+.+
T Consensus 40 l~~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~------gda~~~l~~ 112 (205)
T PF01596_consen 40 LVRLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE------GDALEVLPE 112 (205)
T ss_dssp HHHHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE------S-HHHHHHH
T ss_pred HHHhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE------eccHhhHHH
Confidence 34455678999998754 7888888887642 299999999988777653 4532 2343 334444444
Q ss_pred hcC----CCccEEE-EcCCcHH--HHHHHHHHhhcCCcEEEEec
Q 020435 206 MTD----GGADYCF-ECVGLAS--LVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 206 ~~~----~g~d~v~-d~~g~~~--~~~~~~~~l~~~~G~~v~~g 242 (326)
+.. +.||.|| |+.-..+ .+..+++.|+++ |.++.=.
T Consensus 113 l~~~~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN 155 (205)
T PF01596_consen 113 LANDGEEGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADN 155 (205)
T ss_dssp HHHTTTTTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEET
T ss_pred HHhccCCCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEcc
Confidence 432 3799998 7765533 366788999996 6666543
No 350
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.66 E-value=0.05 Score=46.58 Aligned_cols=73 Identities=19% Similarity=0.246 Sum_probs=49.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-EEEcCCCCCCccHHHHHHHhcCC-CccEEEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTDG-GADYCFE 216 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~d 216 (326)
+.++||+|+ |.+|..+++.+...|. +|+++.++.++ ....+ ...|..+ .+++.+.+.+.... +.|+++.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLAD--IEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCC--HHHHHHHHHHHHHhCCCcEEEE
Confidence 578999987 9999999999988998 99999987654 11211 1123222 23333444444433 7899999
Q ss_pred cCCc
Q 020435 217 CVGL 220 (326)
Q Consensus 217 ~~g~ 220 (326)
+.+.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8874
No 351
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=95.64 E-value=0.058 Score=45.25 Aligned_cols=100 Identities=12% Similarity=0.151 Sum_probs=60.4
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHh
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~ 206 (326)
+.+.....++.+||-.|+|. |..+..+++ .|. +|++++.+++..+.+++ .+.. +.... .+... . .
T Consensus 22 l~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~---~d~~~-~-~- 90 (195)
T TIGR00477 22 VREAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA---YDINA-A-A- 90 (195)
T ss_pred HHHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe---ccchh-c-c-
Confidence 34445555677999998765 666666665 477 99999999987776643 2322 11100 11100 0 1
Q ss_pred cCCCccEEEEcCC-----c---HHHHHHHHHHhhcCCcEEEEec
Q 020435 207 TDGGADYCFECVG-----L---ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 207 ~~~g~d~v~d~~g-----~---~~~~~~~~~~l~~~~G~~v~~g 242 (326)
..+.+|+|+.... . ...++.+.+.|+++ |.++.+.
T Consensus 91 ~~~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~ 133 (195)
T TIGR00477 91 LNEDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA 133 (195)
T ss_pred ccCCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence 1237999975421 1 24577888999998 9965553
No 352
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.64 E-value=0.12 Score=45.98 Aligned_cols=43 Identities=23% Similarity=0.220 Sum_probs=37.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK 181 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~ 181 (326)
++.++||.|+|+.+.+++..+...|+.+++++.|+.++.+.+.
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 4679999999999999998888899878999999988876653
No 353
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.63 E-value=0.079 Score=46.14 Aligned_cols=79 Identities=18% Similarity=0.199 Sum_probs=51.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.+|||+|+ +.+|..+++.+...|+ +|+.++++.++.+.+ ++.+.+ +++ |..+ .++..+.+.+...
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 86 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS--EQELSALADFALSKL 86 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 3789999987 9999999998888999 899998877765443 223322 222 2222 1223333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++.+.+.
T Consensus 87 ~~~d~li~~ag~ 98 (255)
T PRK06113 87 GKVDILVNNAGG 98 (255)
T ss_pred CCCCEEEECCCC
Confidence 379999998873
No 354
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []. Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.
Probab=95.63 E-value=0.067 Score=46.24 Aligned_cols=106 Identities=25% Similarity=0.458 Sum_probs=63.4
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII 204 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~i~ 204 (326)
.+....++|++||-.|+|+ |..+..+++..+. .+|++++-+++-++.+++ .+.. ..+..+. +++
T Consensus 40 ~~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da---~~l----- 110 (233)
T PF01209_consen 40 IKLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDA---EDL----- 110 (233)
T ss_dssp HHHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BT---TB------
T ss_pred HhccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCH---HHh-----
Confidence 3445678899999998765 7777788887652 389999999998887754 2221 1222211 111
Q ss_pred HhcCCCccEEEEcCCc------HHHHHHHHHHhhcCCcEEEEeccCCCC
Q 020435 205 DMTDGGADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGVDQPG 247 (326)
Q Consensus 205 ~~~~~g~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~~~~~ 247 (326)
...++.+|+|..+.+- ...++++.+.|+|+ |+++.+....+.
T Consensus 111 p~~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPG-G~l~ile~~~p~ 158 (233)
T PF01209_consen 111 PFPDNSFDAVTCSFGLRNFPDRERALREMYRVLKPG-GRLVILEFSKPR 158 (233)
T ss_dssp -S-TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEE-EEEEEEEEEB-S
T ss_pred cCCCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCC-eEEEEeeccCCC
Confidence 1112379999876653 34588999999998 999998876544
No 355
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.63 E-value=0.053 Score=54.49 Aligned_cols=113 Identities=22% Similarity=0.277 Sum_probs=68.3
Q ss_pred ccceEEecccceEEcCCCCCccccccccchhhhhhhhhhhhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC
Q 020435 94 FSEYTVLDIAHVVKVDPTVPPNRACLLSCGVSTGVGAAWRTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV 172 (326)
Q Consensus 94 ~a~~~~v~~~~~~~ip~~~s~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~ 172 (326)
..+|+-+++...|.+ +..+.|++=.-.++ ....-.+.++||+|+ |.+|.++++.+...|+ +|+++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r 446 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADL 446 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeC
Confidence 345666777777766 55555554321111 011124789999987 9999999999988999 9999999
Q ss_pred ChhHHHHHH-h----cCCc--EEE--cCCCCCCccHHHHHHHhcC--CCccEEEEcCCc
Q 020435 173 ISEKFEIGK-R----FGVT--EFV--NSKNCGDKSVSQIIIDMTD--GGADYCFECVGL 220 (326)
Q Consensus 173 ~~~~~~~~~-~----~g~~--~vi--~~~~~~~~~~~~~i~~~~~--~g~d~v~d~~g~ 220 (326)
+.++.+.+. . .+.. ..+ |..+ ..++.+.+.+... +++|++++++|.
T Consensus 447 ~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd--~~~v~~a~~~i~~~~g~iDilV~nAG~ 503 (676)
T TIGR02632 447 NLEAAEAVAAEINGQFGAGRAVALKMDVTD--EQAVKAAFADVALAYGGVDIVVNNAGI 503 (676)
T ss_pred CHHHHHHHHHHHHhhcCCCcEEEEECCCCC--HHHHHHHHHHHHHhcCCCcEEEECCCC
Confidence 887665432 1 2221 122 2222 1233333333322 389999998884
No 356
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=95.62 E-value=0.11 Score=43.32 Aligned_cols=76 Identities=26% Similarity=0.300 Sum_probs=50.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-c----CCcE-EEcCCCCCCccHHHHHHHhcCCCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-F----GVTE-FVNSKNCGDKSVSQIIIDMTDGGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~----g~~~-vi~~~~~~~~~~~~~i~~~~~~g~ 211 (326)
++.+++|+|+ |.+|..+++.+...|. +|+.+.++.++.+.+.+ + +... ..+..+ ..++.+.+ .++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~--~~~~~~~~-----~~~ 98 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD--DAARAAAI-----KGA 98 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC--HHHHHHHH-----hcC
Confidence 5689999987 9999998888888887 99999998877665432 2 2221 111111 01222222 268
Q ss_pred cEEEEcCCcHH
Q 020435 212 DYCFECVGLAS 222 (326)
Q Consensus 212 d~v~d~~g~~~ 222 (326)
|+||.+.....
T Consensus 99 diVi~at~~g~ 109 (194)
T cd01078 99 DVVFAAGAAGV 109 (194)
T ss_pred CEEEECCCCCc
Confidence 99999887665
No 357
>PRK05884 short chain dehydrogenase; Provisional
Probab=95.62 E-value=0.088 Score=45.00 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=49.1
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCcEE-EcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTEF-VNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~~v-i~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
+++|+|+ |.+|..+++.+...|+ +|+.+++++++.+.+ ++++...+ .|..+ .+++.+.+.+. .+.+|+++++.
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~-~~~id~lv~~a 77 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD--PASLEEARGLF-PHHLDTIVNVP 77 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC--HHHHHHHHHHH-hhcCcEEEECC
Confidence 5899987 8999999999988899 999999988876654 33444322 23322 12233333332 23689999876
Q ss_pred C
Q 020435 219 G 219 (326)
Q Consensus 219 g 219 (326)
+
T Consensus 78 g 78 (223)
T PRK05884 78 A 78 (223)
T ss_pred C
Confidence 4
No 358
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.62 E-value=0.086 Score=45.94 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=60.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc--CCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF--GVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~--g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
+.+|||+|+ |.+|..+++.+...|. +|+++.+++++....... ++. ++..+- .+..+.+.+....++|+||.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~-~~~~Dl---~d~~~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQ-IVRADV---TEGSDKLVEAIGDDSDAVIC 91 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceE-EEEeeC---CCCHHHHHHHhhcCCCEEEE
Confidence 679999997 9999999998888898 899999887765443221 232 222111 11112233332227999998
Q ss_pred cCCcHH-------------HHHHHHHHhhcC-CcEEEEeccC
Q 020435 217 CVGLAS-------------LVQEAYACCRKG-WGKTIVLGVD 244 (326)
Q Consensus 217 ~~g~~~-------------~~~~~~~~l~~~-~G~~v~~g~~ 244 (326)
+.+... ....+++.+... .++++.++..
T Consensus 92 ~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~ 133 (251)
T PLN00141 92 ATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI 133 (251)
T ss_pred CCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence 876421 123444444432 1578887653
No 359
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.61 E-value=0.049 Score=48.06 Aligned_cols=79 Identities=16% Similarity=0.230 Sum_probs=52.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH----HHHhcC-C-cEEEcCCCCCCccHHHHHHHhcCC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE----IGKRFG-V-TEFVNSKNCGDKSVSQIIIDMTDG-- 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~----~~~~~g-~-~~vi~~~~~~~~~~~~~i~~~~~~-- 209 (326)
.|+.|||+|+ +++|.+.++=....|+ +++..+.+++..+ .+++.| + ..+.|-.+ .++..+...+...+
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~--~eei~~~a~~Vk~e~G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD--REEIYRLAKKVKKEVG 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 5899999987 7999988888888888 8888887765543 344445 2 12334333 23444333333333
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
.+|++++.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 89999998885
No 360
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=95.61 E-value=0.078 Score=46.25 Aligned_cols=78 Identities=19% Similarity=0.256 Sum_probs=49.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH----HHhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+++.++ ++.+. +.+.+.+ ..+ |..+ .+...+.+.+...
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTK--PESAEKVVKEALEEF 89 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHHc
Confidence 4789999987 8999999999999999 89999877 33222 2233422 222 2222 1223233333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++.+.|.
T Consensus 90 g~id~li~~ag~ 101 (258)
T PRK06935 90 GKIDILVNNAGT 101 (258)
T ss_pred CCCCEEEECCCC
Confidence 379999998874
No 361
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.61 E-value=0.034 Score=49.28 Aligned_cols=44 Identities=34% Similarity=0.341 Sum_probs=39.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 182 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~ 182 (326)
+++++||.|+|+.+.+++.-++..|+.+++++.|+.++.+.+.+
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~ 168 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD 168 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 47899999999999999999999997799999999998777654
No 362
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.60 E-value=0.14 Score=44.09 Aligned_cols=91 Identities=21% Similarity=0.273 Sum_probs=56.3
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------H----HHHHHhcCCc-EEEcCCCCC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGVT-EFVNSKNCG 195 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-------------------~----~~~~~~~g~~-~vi~~~~~~ 195 (326)
..+|+|.|.|++|..++..+...|.++++.++.+.- | .+.++++..+ .+...+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~-- 88 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEE-- 88 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeee--
Confidence 468999999999999999999999988888885431 1 1122233321 2221221
Q ss_pred CccH-HHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcC
Q 020435 196 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKG 234 (326)
Q Consensus 196 ~~~~-~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~ 234 (326)
.+ .+.+.++...++|+|+||..+...-..+.+.+...
T Consensus 89 --~i~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~ 126 (231)
T cd00755 89 --FLTPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKR 126 (231)
T ss_pred --ecCHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHh
Confidence 11 12233343347999999999877444455555554
No 363
>PLN00203 glutamyl-tRNA reductase
Probab=95.59 E-value=0.065 Score=51.77 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=52.0
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcC-CcE-EEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFG-VTE-FVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g-~~~-vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
+.+|+|+|+|.+|.++++.+...|+.+|+++.++.++.+.+. .++ ... +...+ +..+.+ .++|+||.
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~~~-----dl~~al-----~~aDVVIs 335 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKPLD-----EMLACA-----AEADVVFT 335 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeecHh-----hHHHHH-----hcCCEEEE
Confidence 689999999999999999999999768999999988877654 353 221 11111 122222 26999999
Q ss_pred cCCcHH
Q 020435 217 CVGLAS 222 (326)
Q Consensus 217 ~~g~~~ 222 (326)
|.+.+.
T Consensus 336 AT~s~~ 341 (519)
T PLN00203 336 STSSET 341 (519)
T ss_pred ccCCCC
Confidence 987644
No 364
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=95.59 E-value=0.11 Score=47.44 Aligned_cols=36 Identities=28% Similarity=0.294 Sum_probs=31.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 174 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~ 174 (326)
...+|+|+|+|++|..+++.+...|.+++..++.+.
T Consensus 23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 356899999999999999999999988888888763
No 365
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=95.56 E-value=0.33 Score=36.63 Aligned_cols=92 Identities=20% Similarity=0.138 Sum_probs=61.5
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcHH
Q 020435 143 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLAS 222 (326)
Q Consensus 143 vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~~ 222 (326)
|+|.|.|.+|..+++.++..+. +|++++.+++..+.+++.|.. ++..+. .-.+.+++.--..++.++-+.++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~----~~~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDA----TDPEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-T----TSHHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccc----hhhhHHhhcCccccCEEEEccCCHH
Confidence 6788999999999999999776 899999999999999988854 554433 1123344442238999988877655
Q ss_pred HHHH---HHHHhhcCCcEEEEe
Q 020435 223 LVQE---AYACCRKGWGKTIVL 241 (326)
Q Consensus 223 ~~~~---~~~~l~~~~G~~v~~ 241 (326)
.-.. ..+-+.+. .+++..
T Consensus 75 ~n~~~~~~~r~~~~~-~~ii~~ 95 (116)
T PF02254_consen 75 ENLLIALLARELNPD-IRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHTTT-SEEEEE
T ss_pred HHHHHHHHHHHHCCC-CeEEEE
Confidence 2222 23334454 555544
No 366
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.56 E-value=0.097 Score=40.98 Aligned_cols=95 Identities=22% Similarity=0.258 Sum_probs=55.7
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------HH----HHHHhcC-CcEEEcCCCCC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------KF----EIGKRFG-VTEFVNSKNCG 195 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-------------------~~----~~~~~~g-~~~vi~~~~~~ 195 (326)
..+|+|.|+|++|..++..+-..|.+++..++.+.= |. +.++++. ..++.....
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~-- 79 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPE-- 79 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEES--
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeec--
Confidence 468999999999999999999999988888885321 11 1222332 222222221
Q ss_pred CccH-HHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEE
Q 020435 196 DKSV-SQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 196 ~~~~-~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~ 240 (326)
.+ .+.+.++. .++|+||+|..+...-..+.+.+... +.-+.
T Consensus 80 --~~~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i 121 (135)
T PF00899_consen 80 --KIDEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFI 121 (135)
T ss_dssp --HCSHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEE
T ss_pred --ccccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEE
Confidence 11 12222222 26899999999877444555555554 44333
No 367
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.55 E-value=0.13 Score=43.80 Aligned_cols=102 Identities=22% Similarity=0.276 Sum_probs=62.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCcEEE------cC-CCCCCcc-HHHHHHHhc-
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV------NS-KNCGDKS-VSQIIIDMT- 207 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~~~vi------~~-~~~~~~~-~~~~i~~~~- 207 (326)
.++.+||+.|+|. |.-++.||. .|. .|++++.|+...+.+. +.+..... .. .. ..-+ ....+.++.
T Consensus 33 ~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 33 PAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRA-GNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeec-CceEEEEccCCCCCc
Confidence 5678999999876 777777775 698 9999999999888752 23321000 00 00 0000 000011111
Q ss_pred --CCCccEEEEcCCc--------HHHHHHHHHHhhcCCcEEEEeccC
Q 020435 208 --DGGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 208 --~~g~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.+.+|.|+|+..- ...++.+.++|+++ |++++....
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~~ 154 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITLD 154 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEEE
Confidence 1268999997542 22477899999998 987777653
No 368
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=95.55 E-value=0.064 Score=46.43 Aligned_cols=83 Identities=19% Similarity=0.224 Sum_probs=52.5
Q ss_pred cCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc--EEE--cCCCCCCccHHHHHHHhc
Q 020435 137 VEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EFV--NSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 137 ~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~--~vi--~~~~~~~~~~~~~i~~~~ 207 (326)
..++.++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ ++.+.. +++ +.+.....++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 447889999987 9999999998888899 999999987765433 233321 222 221101123333333332
Q ss_pred C--CCccEEEEcCCc
Q 020435 208 D--GGADYCFECVGL 220 (326)
Q Consensus 208 ~--~g~d~v~d~~g~ 220 (326)
. +.+|.++.+++.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 2 279999988763
No 369
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=95.54 E-value=0.057 Score=43.18 Aligned_cols=98 Identities=18% Similarity=0.244 Sum_probs=63.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCC---CCCccHHHHHHHhcCC-CccEE
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKN---CGDKSVSQIIIDMTDG-GADYC 214 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~---~~~~~~~~~i~~~~~~-g~d~v 214 (326)
..+|+|+|+ |++|.++++.-|+.+. -|..++.++.... ....+++.++ .+.+...+.+.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~A-----d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQA-----DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeecccccc-----cceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 358999987 9999999999999998 8888886654432 2223443322 0112334444555566 99999
Q ss_pred EEcCCcH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Q 020435 215 FECVGLA--------------------------SLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 215 ~d~~g~~--------------------------~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
|+..|+= .....+-..|+++ |-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~G-GLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPG-GLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCC-ceeeecccc
Confidence 9977750 0122334578897 888887753
No 370
>PRK06484 short chain dehydrogenase; Validated
Probab=95.53 E-value=0.07 Score=51.80 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=54.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCcE---EEcCCCCCCccHHHHHHHhcC--CCc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVTE---FVNSKNCGDKSVSQIIIDMTD--GGA 211 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~~---vi~~~~~~~~~~~~~i~~~~~--~g~ 211 (326)
++.++||+|+ +++|.++++.+...|+ +|+.++++.++.+.+ ++++... ..|..+ .+++.+.+.+... +++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~i 80 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD--EAQIREGFEQLHREFGRI 80 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC--HHHHHHHHHHHHHHhCCC
Confidence 5789999987 8999999999999999 999999988876654 4455322 223222 2333333333322 379
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|+++++.|.
T Consensus 81 D~li~nag~ 89 (520)
T PRK06484 81 DVLVNNAGV 89 (520)
T ss_pred CEEEECCCc
Confidence 999998764
No 371
>PRK06849 hypothetical protein; Provisional
Probab=95.53 E-value=0.88 Score=42.48 Aligned_cols=95 Identities=15% Similarity=0.062 Sum_probs=60.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCC-CccEEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYCF 215 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v~ 215 (326)
...+|||+|+ .+.|+.+++.++..|. +|++++..+.......+ ...-..+.........+.+.+.++... ++|+++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vI 81 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLI 81 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 4689999998 5789999999999999 99999987655432221 111122322221124577777777666 899999
Q ss_pred EcCCcHHHHHHHHHHhhcC
Q 020435 216 ECVGLASLVQEAYACCRKG 234 (326)
Q Consensus 216 d~~g~~~~~~~~~~~l~~~ 234 (326)
-+.............+.+.
T Consensus 82 P~~e~~~~~a~~~~~l~~~ 100 (389)
T PRK06849 82 PTCEEVFYLSHAKEELSAY 100 (389)
T ss_pred ECChHHHhHHhhhhhhcCC
Confidence 7766443233334455554
No 372
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.52 E-value=0.098 Score=45.00 Aligned_cols=81 Identities=20% Similarity=0.216 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcCCc-EEEcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
++.++||+|+ |.+|..+++.+...|. .|+...++.++.+.+ ..++.. .++..+-...+.+.+.+.+... +++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3679999987 9999999999888898 888888877766554 333321 2222211011223333333221 37999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
++.+.+.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999874
No 373
>PLN02244 tocopherol O-methyltransferase
Probab=95.52 E-value=0.074 Score=48.74 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=63.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHHhcCCC
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG 210 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~~~~~g 210 (326)
+++++||-+|+|. |..+..+++..|+ +|++++.+++..+.+++ .+.. .++..+. .++ ....+.
T Consensus 117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~---~~~-----~~~~~~ 186 (340)
T PLN02244 117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVADA---LNQ-----PFEDGQ 186 (340)
T ss_pred CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCc---ccC-----CCCCCC
Confidence 6789999998865 6667778887788 99999999987776654 2321 1221111 110 112237
Q ss_pred ccEEEEcCCc------HHHHHHHHHHhhcCCcEEEEecc
Q 020435 211 ADYCFECVGL------ASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 211 ~d~v~d~~g~------~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
||+|+..... ...++.+.+.|+++ |+++....
T Consensus 187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~ 224 (340)
T PLN02244 187 FDLVWSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW 224 (340)
T ss_pred ccEEEECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 9999853322 23577899999998 99988754
No 374
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=95.51 E-value=0.086 Score=45.68 Aligned_cols=77 Identities=22% Similarity=0.369 Sum_probs=50.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EEE--cCCCCCCccHHHHHHHhc--CCC
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFV--NSKNCGDKSVSQIIIDMT--DGG 210 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~vi--~~~~~~~~~~~~~i~~~~--~~g 210 (326)
.++||+|+ |.+|..++..+...|. +|++++++.++.+.+.+ .+.. +.+ |..+ ..++.+.+.+.. .++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK--EDEIADMIAAAAAEFGG 78 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC--HHHHHHHHHHHHHhcCC
Confidence 57999997 9999999999888999 99999998877655432 2221 122 2222 123333333332 127
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++|.+.+.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999987764
No 375
>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated
Probab=95.51 E-value=0.27 Score=40.74 Aligned_cols=100 Identities=17% Similarity=0.259 Sum_probs=64.0
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc--EEEcCCCCCCccHHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT--EFVNSKNCGDKSVSQIII 204 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~--~vi~~~~~~~~~~~~~i~ 204 (326)
++....+.++++||-.|+|. |..++.+++.....+|++++.+++..+.+++ .+.. .++..+ ...
T Consensus 23 ~~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d------~~~--- 92 (187)
T PRK08287 23 ALSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGE------API--- 92 (187)
T ss_pred HHHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecC------chh---
Confidence 34556677889999998765 6666667776532389999999987776643 3322 222211 111
Q ss_pred HhcCCCccEEEEcCC---cHHHHHHHHHHhhcCCcEEEEec
Q 020435 205 DMTDGGADYCFECVG---LASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 205 ~~~~~g~d~v~d~~g---~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
...+.+|+|+.... -...+..+.+.|+++ |.++...
T Consensus 93 -~~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~ 131 (187)
T PRK08287 93 -ELPGKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF 131 (187)
T ss_pred -hcCcCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence 11237999985332 133467889999998 9987753
No 376
>PRK04266 fibrillarin; Provisional
Probab=95.49 E-value=0.34 Score=41.62 Aligned_cols=101 Identities=13% Similarity=0.162 Sum_probs=62.4
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----c-CCcEEEcCCCCCCccHHHHHHHhc
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----F-GVTEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~-g~~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
+...++++++||=.|+|+ |.....+++..+..+|++++.+++..+.+.+ . ++ ..+..+. .+. .....+
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv-~~i~~D~---~~~-~~~~~l- 138 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNI-IPILADA---RKP-ERYAHV- 138 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCc-EEEECCC---CCc-chhhhc-
Confidence 457889999999998754 4455666776653489999999987765432 2 22 2222222 110 000011
Q ss_pred CCCccEEEEcCCcH----HHHHHHHHHhhcCCcEEEEe
Q 020435 208 DGGADYCFECVGLA----SLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 208 ~~g~d~v~d~~g~~----~~~~~~~~~l~~~~G~~v~~ 241 (326)
.+.+|+|+.....+ ..+..+.+.|+++ |+++..
T Consensus 139 ~~~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~ 175 (226)
T PRK04266 139 VEKVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA 175 (226)
T ss_pred cccCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence 12699999544433 2357888899998 999884
No 377
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=95.48 E-value=0.32 Score=42.84 Aligned_cols=102 Identities=16% Similarity=0.213 Sum_probs=60.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-------------------H----HHHHHhcCC-cEEEcCCCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-------------------K----FEIGKRFGV-TEFVNSKNC 194 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-------------------~----~~~~~~~g~-~~vi~~~~~ 194 (326)
...+|+|.|.|++|..++..+...|.++++.++.+.- | .+.++++.. ..+...+++
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~ 108 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF 108 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence 4679999999999999999999999888988885421 1 122233332 123222221
Q ss_pred CCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 195 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 195 ~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.. .+.+.++...++|+|+||.+....-..+.+.+....-.++..+.
T Consensus 109 i~---~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gG 154 (268)
T PRK15116 109 IT---PDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGG 154 (268)
T ss_pred cC---hhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 01 12233333337999999999865344444444443134555543
No 378
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.48 E-value=0.097 Score=45.57 Aligned_cols=79 Identities=22% Similarity=0.207 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHHHHhcCCcEE-EcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEIGKRFGVTEF-VNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~-~~~~~~~~~g~~~v-i~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
.+.+++|+|+ |.+|..+++.+...|+ +|+.+.+.. +..+.++..+...+ .|..+ .++..+.+.+... +++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN--RDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC--HHHHHHHHHHHHHHcCCCCE
Confidence 3679999987 9999999999988998 888775443 33444444343211 23222 1233333333322 37999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
+|.|.|.
T Consensus 83 li~~ag~ 89 (255)
T PRK06463 83 LVNNAGI 89 (255)
T ss_pred EEECCCc
Confidence 9998874
No 379
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.47 E-value=0.29 Score=42.23 Aligned_cols=102 Identities=23% Similarity=0.207 Sum_probs=60.1
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHH----HHHHhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKF----EIGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~-~~~----~~~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.+.++. +.. +.++..+.. +.+ |..+ ..++.+.+.++..
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 82 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST--REGCETLAKATIDRY 82 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC--HHHHHHHHHHHHHHc
Confidence 579999987 8999999998888998 777766432 222 122333322 222 2222 1222222333222
Q ss_pred CCccEEEEcCCc----------H---------------HHHHHHHHHhhcCCcEEEEeccCC
Q 020435 209 GGADYCFECVGL----------A---------------SLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 209 ~g~d~v~d~~g~----------~---------------~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
+++|++|.++|. . ...+.+...++.. |+++.++...
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~ 143 (252)
T PRK06077 83 GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA 143 (252)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence 379999998873 0 0133445566676 8999987643
No 380
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=95.46 E-value=0.14 Score=42.45 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=57.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCcE--EEcCCCCCCccHHHHHHHhcCCCcc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIIDMTDGGAD 212 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~i~~~~~~g~d 212 (326)
++++||-.|+|. |..++.+++.....+|++++.+++..+.++ +.+.+. ++.. +..+ + ...+.+|
T Consensus 42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~------d~~~-~--~~~~~fD 111 (181)
T TIGR00138 42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG------RAED-F--QHEEQFD 111 (181)
T ss_pred CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec------chhh-c--cccCCcc
Confidence 378999998754 555555565543338999999998766554 344332 2222 2221 1 1123899
Q ss_pred EEEEcC-Cc-HHHHHHHHHHhhcCCcEEEEe
Q 020435 213 YCFECV-GL-ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 213 ~v~d~~-g~-~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+... .. +..++.+.+.|+++ |.++..
T Consensus 112 ~I~s~~~~~~~~~~~~~~~~Lkpg-G~lvi~ 141 (181)
T TIGR00138 112 VITSRALASLNVLLELTLNLLKVG-GYFLAY 141 (181)
T ss_pred EEEehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence 998432 22 33466778899998 999876
No 381
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.44 E-value=0.13 Score=47.17 Aligned_cols=35 Identities=31% Similarity=0.333 Sum_probs=31.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|+|+|++|..+++.+...|.+++..++.+
T Consensus 23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35789999999999999999999999899999875
No 382
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=95.43 E-value=0.091 Score=52.50 Aligned_cols=77 Identities=25% Similarity=0.254 Sum_probs=55.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------HHHHHHhcCCcEEEcCCCCCCc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGDK 197 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~~ 197 (326)
.+++|+|+|+|+.|+.+++.++..|. +|++.++.+. ..++++++|++..++..-..+.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 48999999999999999999999999 8988886652 4456677888765554320111
Q ss_pred cHHHHHHHhcCCCccEEEEcCCcH
Q 020435 198 SVSQIIIDMTDGGADYCFECVGLA 221 (326)
Q Consensus 198 ~~~~~i~~~~~~g~d~v~d~~g~~ 221 (326)
.+. .+. .++|.||.+.|..
T Consensus 388 ~~~-~l~----~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS-DLT----SEYDAVFIGVGTY 406 (639)
T ss_pred CHH-HHH----hcCCEEEEeCCCC
Confidence 222 121 2799999999864
No 383
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=95.42 E-value=0.14 Score=43.50 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=31.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999889998876
No 384
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.41 E-value=0.12 Score=45.84 Aligned_cols=76 Identities=22% Similarity=0.343 Sum_probs=48.4
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhc-CCCcc
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT-DGGAD 212 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~-~~g~d 212 (326)
.+++|+|+|++|..+++.+. .|. +|+.+++++++.+.+ +..+.+ +.+ |..+ .+++.+.+.+.. -+++|
T Consensus 3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d--~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS--RESVKALAATAQTLGPVT 78 (275)
T ss_pred CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC--HHHHHHHHHHHHhcCCCC
Confidence 57888898999999998885 798 999999987765433 223322 222 3222 123333333321 13899
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
++++++|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999884
No 385
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=95.41 E-value=0.15 Score=44.18 Aligned_cols=34 Identities=29% Similarity=0.419 Sum_probs=30.2
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
..+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 4799999999999999999999999888888754
No 386
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=95.40 E-value=0.3 Score=41.89 Aligned_cols=101 Identities=20% Similarity=0.222 Sum_probs=62.8
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh------hHH-----------------HHHHhcCC-cEEEcCCCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS------EKF-----------------EIGKRFGV-TEFVNSKNC 194 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~------~~~-----------------~~~~~~g~-~~vi~~~~~ 194 (326)
+..+|+|.|.|++|..++..+-..|.+++..++.+. .++ ++++.... .+|-..++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~- 107 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND- 107 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence 467999999999999999999999998888887533 111 11122221 22322222
Q ss_pred CCccHHHHHHHhcCCCccEEEEcCCcHHHHHHHHH-HhhcCCcEEEEecc
Q 020435 195 GDKSVSQIIIDMTDGGADYCFECVGLASLVQEAYA-CCRKGWGKTIVLGV 243 (326)
Q Consensus 195 ~~~~~~~~i~~~~~~g~d~v~d~~g~~~~~~~~~~-~l~~~~G~~v~~g~ 243 (326)
.=..+.+.++...++|+|+||..+-..--.++. |.+.. -.+|..+.
T Consensus 108 --f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~G 154 (263)
T COG1179 108 --FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMG 154 (263)
T ss_pred --hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecc
Confidence 111334555666699999999998774334444 45554 55565554
No 387
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=95.39 E-value=0.062 Score=45.29 Aligned_cols=35 Identities=37% Similarity=0.441 Sum_probs=31.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 35789999999999999999999998789999876
No 388
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.37 E-value=0.093 Score=45.93 Aligned_cols=78 Identities=17% Similarity=0.285 Sum_probs=48.1
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh---hHHHHH-Hhc-CCc-EE--EcCCCCCCccHHHHHHHhc
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS---EKFEIG-KRF-GVT-EF--VNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~---~~~~~~-~~~-g~~-~v--i~~~~~~~~~~~~~i~~~~ 207 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.+.++. ++.+.+ .++ +.. .. .|..+ .++..+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~ 82 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS--DEEITACFETIK 82 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC--HHHHHHHHHHHH
Confidence 4689999986 5999999999888999 898887643 333333 223 211 12 23222 233333344333
Q ss_pred C--CCccEEEEcCC
Q 020435 208 D--GGADYCFECVG 219 (326)
Q Consensus 208 ~--~g~d~v~d~~g 219 (326)
. +++|++++++|
T Consensus 83 ~~~g~ld~lv~nag 96 (257)
T PRK08594 83 EEVGVIHGVAHCIA 96 (257)
T ss_pred HhCCCccEEEECcc
Confidence 2 37999998876
No 389
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed
Probab=95.34 E-value=0.33 Score=40.87 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=64.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCcEEEcCCCCCCccHHHHHHHhcCC-CccE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVTEFVNSKNCGDKSVSQIIIDMTDG-GADY 213 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~ 213 (326)
++++||-+|+|. |..+..+++.....+|++++.+++..+.+++ .+...+- ... .+..+.+...... .+|.
T Consensus 40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~-~~~---~d~~~~l~~~~~~~~~D~ 114 (202)
T PRK00121 40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLR-LLC---GDAVEVLLDMFPDGSLDR 114 (202)
T ss_pred CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEE-EEe---cCHHHHHHHHcCccccce
Confidence 578899999876 7777777776543389999999998887653 2322221 111 2332334333333 7999
Q ss_pred EEEcCC--------------cHHHHHHHHHHhhcCCcEEEEec
Q 020435 214 CFECVG--------------LASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 214 v~d~~g--------------~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
|+-... ....++.+.+.|+++ |.++...
T Consensus 115 V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~ 156 (202)
T PRK00121 115 IYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT 156 (202)
T ss_pred EEEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence 975332 234588899999998 9998764
No 390
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=95.33 E-value=0.18 Score=43.36 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=29.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDV 172 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~ 172 (326)
..+|+|.|+|++|..++..+...|.++++.++.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~ 53 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD 53 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence 579999999999999999999999988888864
No 391
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=95.31 E-value=0.14 Score=45.27 Aligned_cols=92 Identities=16% Similarity=0.109 Sum_probs=59.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-Hhc---CCcEEEcCCCCCCccHHHHHHHhcCCCccE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRF---GVTEFVNSKNCGDKSVSQIIIDMTDGGADY 213 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~---g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~ 213 (326)
..+.+++|+|+|++|.+++..+...|. +|+++.+++++.+.+ +.+ +....+..+ + .....+|+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~--------~----~~~~~~Di 181 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFSMD--------E----LPLHRVDL 181 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEechh--------h----hcccCccE
Confidence 457899999999999999988888898 899999988776544 333 221222111 1 11126899
Q ss_pred EEEcCCcHHH--H---HHHHHHhhcCCcEEEEecc
Q 020435 214 CFECVGLASL--V---QEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 214 v~d~~g~~~~--~---~~~~~~l~~~~G~~v~~g~ 243 (326)
|++|.+.... . ......++++ ..++.+..
T Consensus 182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y 215 (270)
T TIGR00507 182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVY 215 (270)
T ss_pred EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEecc
Confidence 9999886420 1 1123457776 67776644
No 392
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.31 E-value=0.086 Score=44.79 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=48.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCC--CccEEEE
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDG--GADYCFE 216 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~--g~d~v~d 216 (326)
.++||+|+ |.+|..++..+... . +|++++++.++.+.+.+ ...-+++..+- .+ .+.+.+...+ ++|.+|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~---~~-~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDL---TD-PEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCC---CC-HHHHHHHHHhcCCCCEEEE
Confidence 58999987 99999888877666 6 89999998877665543 22122332222 11 2233333333 7999999
Q ss_pred cCCc
Q 020435 217 CVGL 220 (326)
Q Consensus 217 ~~g~ 220 (326)
+.+.
T Consensus 78 ~ag~ 81 (227)
T PRK08219 78 NAGV 81 (227)
T ss_pred CCCc
Confidence 8874
No 393
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=95.30 E-value=0.13 Score=45.12 Aligned_cols=79 Identities=23% Similarity=0.384 Sum_probs=51.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ +.+|..++..+...|+ +|+.+.+++++.+.+ +..+.. ..+ |..+ ..+..+.+.+...
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD--EDGVQAMVSQIEKEV 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 4678999987 8999999988888999 899999888765543 233432 222 2222 1223333333222
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++++.|.
T Consensus 86 ~~id~li~~ag~ 97 (265)
T PRK07097 86 GVIDILVNNAGI 97 (265)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 394
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.29 E-value=0.11 Score=46.37 Aligned_cols=36 Identities=22% Similarity=0.345 Sum_probs=31.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 174 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~ 174 (326)
.+.+++|+|+|++|.+++..+...|+.+|+++.++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 467899999999999999888889986699999985
No 395
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=95.29 E-value=0.18 Score=43.24 Aligned_cols=70 Identities=13% Similarity=0.190 Sum_probs=50.5
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH--HHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 020435 143 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK--FEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 143 vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~--~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
|+|+|+ |.+|..+++.+...+. +|.++.|+..+ .+.++..|++.+ ..+- +-.+.+.+... |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~----~~~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADY----DDPESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-T----T-HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-eccc----CCHHHHHHHHc-CCceEEeecC
Confidence 789997 9999999999988887 89999988643 455677888544 3222 12334444433 8999998888
No 396
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.28 E-value=0.1 Score=45.72 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=48.3
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCC---hhHHHHH-HhcCCcEEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVI---SEKFEIG-KRFGVTEFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~---~~~~~~~-~~~g~~~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.+.+. +++.+.+ ++++....+ |..+ .++..+.+.+...
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~ 81 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS--DEQIDALFASLGQH 81 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC--HHHHHHHHHHHHHH
Confidence 4689999984 5899999998888999 88887543 2333332 334432222 2222 2333334443332
Q ss_pred -CCccEEEEcCCc
Q 020435 209 -GGADYCFECVGL 220 (326)
Q Consensus 209 -~g~d~v~d~~g~ 220 (326)
+++|++++++|.
T Consensus 82 ~g~iD~lvnnAG~ 94 (260)
T PRK06997 82 WDGLDGLVHSIGF 94 (260)
T ss_pred hCCCcEEEEcccc
Confidence 389999988763
No 397
>PRK06523 short chain dehydrogenase; Provisional
Probab=95.28 E-value=0.087 Score=45.95 Aligned_cols=75 Identities=19% Similarity=0.244 Sum_probs=47.1
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-EEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
++.++||+|+ |.+|..+++.+...|+ +|++++++.+... .-... ...|..+ .++..+.+.++.. +++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDDL---PEGVEFVAADLTT--AEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhhc---CCceeEEecCCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 4789999987 8999999999988999 8999998755321 11111 1112222 1222222222221 379999
Q ss_pred EEcCC
Q 020435 215 FECVG 219 (326)
Q Consensus 215 ~d~~g 219 (326)
++++|
T Consensus 82 i~~ag 86 (260)
T PRK06523 82 VHVLG 86 (260)
T ss_pred EECCc
Confidence 99887
No 398
>PRK08303 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.13 Score=46.44 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=30.4
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecc
Confidence 4689999987 8999999999999999 89999886
No 399
>PRK07791 short chain dehydrogenase; Provisional
Probab=95.27 E-value=0.14 Score=45.68 Aligned_cols=79 Identities=22% Similarity=0.231 Sum_probs=49.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh---------hHHHH----HHhcCCc-EEE--cCCCCCCccHHH
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS---------EKFEI----GKRFGVT-EFV--NSKNCGDKSVSQ 201 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~---------~~~~~----~~~~g~~-~vi--~~~~~~~~~~~~ 201 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.++++. ++.+. ++..+.. ..+ |..+ .++..+
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~--~~~v~~ 81 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD--WDGAAN 81 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC--HHHHHH
Confidence 5789999987 8999999998888999 888887654 33322 2223322 122 2222 223333
Q ss_pred HHHHhcC--CCccEEEEcCCc
Q 020435 202 IIIDMTD--GGADYCFECVGL 220 (326)
Q Consensus 202 ~i~~~~~--~g~d~v~d~~g~ 220 (326)
.+.+... +++|++++++|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 3333322 389999998874
No 400
>PRK12743 oxidoreductase; Provisional
Probab=95.26 E-value=0.13 Score=44.76 Aligned_cols=78 Identities=18% Similarity=0.065 Sum_probs=47.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHH----HHhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~-~~~~~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.+.+ +.++.+. ++..+.. +.+ |..+ ..+..+.+.+...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD--LPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC--HHHHHHHHHHHHHHc
Confidence 468999987 8999999999999999 8887754 4443332 2334432 232 2222 1222222333221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|.+.|.
T Consensus 79 ~~id~li~~ag~ 90 (256)
T PRK12743 79 GRIDVLVNNAGA 90 (256)
T ss_pred CCCCEEEECCCC
Confidence 279999998874
No 401
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.25 E-value=0.057 Score=43.01 Aligned_cols=96 Identities=19% Similarity=0.137 Sum_probs=56.3
Q ss_pred EEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCC--CC-ccHHHHHHHhcCCCccEEEEcCC
Q 020435 143 VVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNC--GD-KSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 143 vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~--~~-~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
|+|+|+|++|.+.+..++..|. +|..+.+.+ ..+.+++.|........+. .. ...... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999998888888998 999999888 7776765543111110000 00 000000 111138999999887
Q ss_pred cHH---HHHHHHHHhhcCCcEEEEecc
Q 020435 220 LAS---LVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 220 ~~~---~~~~~~~~l~~~~G~~v~~g~ 243 (326)
... .++.+...+.++ ..++.+.+
T Consensus 77 a~~~~~~l~~l~~~~~~~-t~iv~~qN 102 (151)
T PF02558_consen 77 AYQLEQALQSLKPYLDPN-TTIVSLQN 102 (151)
T ss_dssp GGGHHHHHHHHCTGEETT-EEEEEESS
T ss_pred ccchHHHHHHHhhccCCC-cEEEEEeC
Confidence 655 233334444554 56666644
No 402
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.25 E-value=0.12 Score=45.42 Aligned_cols=78 Identities=22% Similarity=0.219 Sum_probs=48.8
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCcE-EEcCCCCCCccHHHHHHHhcC--CCccE
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADY 213 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~g~d~ 213 (326)
++||+|+ |.+|..+++.+...|. +|+.++++.++.+.+ +..+.+. ++..+-.+..++.+.+.+... +++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899987 9999999998888899 899999888765532 2233222 221111011222222322221 37999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
+|++.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9998874
No 403
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.24 E-value=0.099 Score=46.07 Aligned_cols=104 Identities=16% Similarity=0.249 Sum_probs=67.4
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--cEEEcCCCCCCccHHHHHHHhcC
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
+....++.++.+||=+|+|. |..+..+++..++ +|++++.+++..+.+++... ..+ .... .++.+ ....+
T Consensus 44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i-~~~~---~D~~~--~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKI-EFEA---NDILK--KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCce-EEEE---CCccc--CCCCC
Confidence 55667888999999998764 5556667777787 99999999988887765321 111 1101 11110 01112
Q ss_pred CCccEEEE--cC---C---cHHHHHHHHHHhhcCCcEEEEecc
Q 020435 209 GGADYCFE--CV---G---LASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 209 ~g~d~v~d--~~---g---~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+.+|+|+. +. + -...++.+.+.|+|+ |.++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEe
Confidence 37999985 21 1 134577889999998 99998764
No 404
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=95.24 E-value=0.11 Score=39.19 Aligned_cols=93 Identities=25% Similarity=0.335 Sum_probs=57.6
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCC---cEEEcCCCCCCccHHHHHHHhcCCCcc
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGV---TEFVNSKNCGDKSVSQIIIDMTDGGAD 212 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~---~~vi~~~~~~~~~~~~~i~~~~~~g~d 212 (326)
|.+||-.|+|. |..++.+++.... ++++++.++...+.++. .+. ..++. .++.+.......+.+|
T Consensus 1 g~~vlD~~~G~-G~~~~~~~~~~~~-~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~------~D~~~~~~~~~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGCGS-GTFLLAALRRGAA-RVTGVDIDPEAVELARRNLPRNGLDDRVEVIV------GDARDLPEPLPDGKFD 72 (117)
T ss_dssp TEEEEEETSTT-CHHHHHHHHHCTC-EEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE------SHHHHHHHTCTTT-EE
T ss_pred CCEEEEcCcch-HHHHHHHHHHCCC-eEEEEEECHHHHHHHHHHHHHccCCceEEEEE------CchhhchhhccCceeE
Confidence 56788886543 4444444544435 99999999998887764 232 12322 3444433334344999
Q ss_pred EEEE-cCCc-------------HHHHHHHHHHhhcCCcEEEEe
Q 020435 213 YCFE-CVGL-------------ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 213 ~v~d-~~g~-------------~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+|+- ..-. ..++..+.+.|+++ |.++.+
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~ 114 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI 114 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence 9984 2222 23577899999998 998876
No 405
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.23 E-value=0.18 Score=46.10 Aligned_cols=88 Identities=23% Similarity=0.298 Sum_probs=57.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.|.+|.|+|.|.+|..+++.++.+|. +|++.+++.+... ....+... .++.+.+. ..|+|+-+.
T Consensus 149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~-~~~~~~~~---------~~l~ell~-----~aDiV~l~l 212 (333)
T PRK13243 149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPEA-EKELGAEY---------RPLEELLR-----ESDFVSLHV 212 (333)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChhh-HHHcCCEe---------cCHHHHHh-----hCCEEEEeC
Confidence 47899999999999999999999999 9999998754432 22333311 12222222 367777666
Q ss_pred CcHH-----HHHHHHHHhhcCCcEEEEecc
Q 020435 219 GLAS-----LVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 219 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.... .-...+..++++ ..+|.++.
T Consensus 213 P~t~~T~~~i~~~~~~~mk~g-a~lIN~aR 241 (333)
T PRK13243 213 PLTKETYHMINEERLKLMKPT-AILVNTAR 241 (333)
T ss_pred CCChHHhhccCHHHHhcCCCC-eEEEECcC
Confidence 5322 113456677776 66666654
No 406
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.20 E-value=0.14 Score=46.25 Aligned_cols=88 Identities=17% Similarity=0.187 Sum_probs=57.3
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.+.+|.|+|.|.||..+++.++.+|. +|++.+++.++.+ +.+.+.. . .++.+.+. ..|+|+.+.
T Consensus 135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~~--~---~~l~e~l~-----~aDvvv~~l 198 (312)
T PRK15469 135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFAG--R---EELSAFLS-----QTRVLINLL 198 (312)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeecc--c---ccHHHHHh-----cCCEEEECC
Confidence 57899999999999999999999999 9999987654321 2211111 1 12322222 478887766
Q ss_pred CcHHH-----HHHHHHHhhcCCcEEEEecc
Q 020435 219 GLASL-----VQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 219 g~~~~-----~~~~~~~l~~~~G~~v~~g~ 243 (326)
..... -...+..++++ ..+|.++.
T Consensus 199 Plt~~T~~li~~~~l~~mk~g-a~lIN~aR 227 (312)
T PRK15469 199 PNTPETVGIINQQLLEQLPDG-AYLLNLAR 227 (312)
T ss_pred CCCHHHHHHhHHHHHhcCCCC-cEEEECCC
Confidence 64321 22456778887 77777764
No 407
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=95.20 E-value=0.18 Score=43.99 Aligned_cols=35 Identities=26% Similarity=0.382 Sum_probs=30.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35799999999999999999999999888888753
No 408
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.20 E-value=0.22 Score=43.42 Aligned_cols=103 Identities=16% Similarity=0.237 Sum_probs=66.8
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHH----hcCCcEEEcCCCCCCccHHHHHHHhc
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
...+.....+||-+|.+ +|+.++.+|+.++. .+|+.++.+++..+.++ +.|..+-|.... .+..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~---G~a~e~L~~l~ 148 (247)
T PLN02589 73 MLLKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFRE---GPALPVLDQMI 148 (247)
T ss_pred HHHHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---ccHHHHHHHHH
Confidence 33455567799999863 47777788887632 28999999988777664 355333333222 44555555543
Q ss_pred -----CCCccEEE-EcCCcH--HHHHHHHHHhhcCCcEEEE
Q 020435 208 -----DGGADYCF-ECVGLA--SLVQEAYACCRKGWGKTIV 240 (326)
Q Consensus 208 -----~~g~d~v~-d~~g~~--~~~~~~~~~l~~~~G~~v~ 240 (326)
.+.+|.|| |+--.. ..+..+++.|+++ |.++.
T Consensus 149 ~~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~ 188 (247)
T PLN02589 149 EDGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY 188 (247)
T ss_pred hccccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence 14899998 655443 2367888999997 77554
No 409
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.13 Score=45.31 Aligned_cols=80 Identities=18% Similarity=0.059 Sum_probs=49.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEEcCCCCCCccHHHHHHHhc--CCCc
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFVNSKNCGDKSVSQIIIDMT--DGGA 211 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi~~~~~~~~~~~~~i~~~~--~~g~ 211 (326)
..++||+|+ |.+|..+++.+...|+ +|++++++.++.+.+ +..+.. +.+..+-.+.+++.+.+.+.. -+++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999987 9999999998888999 899998877654432 223332 222222101122333333321 1378
Q ss_pred cEEEEcCCc
Q 020435 212 DYCFECVGL 220 (326)
Q Consensus 212 d~v~d~~g~ 220 (326)
|++|.+++.
T Consensus 89 d~vi~~Ag~ 97 (274)
T PRK07775 89 EVLVSGAGD 97 (274)
T ss_pred CEEEECCCc
Confidence 999998874
No 410
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.51 Score=40.85 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=30.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEc-CChhHH
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVD-VISEKF 177 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~-~~~~~~ 177 (326)
.+.++||+|+ |.+|.++++.+...|+ +|+.+. +..++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4679999987 8999999999999999 787764 444443
No 411
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=95.18 E-value=0.23 Score=46.16 Aligned_cols=35 Identities=23% Similarity=0.246 Sum_probs=31.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|+|+|++|..++..+...|.++++.++.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46789999999999999999999999889999876
No 412
>PF01564 Spermine_synth: Spermine/spermidine synthase; InterPro: IPR001045 Synonym(s): Spermidine aminopropyltransferase A group of polyamine biosynthetic enzymes involved in the fifth (last) step in the biosynthesis of spermidine from arginine and methionine which includes; spermidine synthase (2.5.1.16 from EC), spermine synthase (2.5.1.22 from EC) and putrescine N-methyltransferase (2.1.1.53 from EC) []. The Thermotoga maritima spermidine synthase monomer consists of two domains: an N-terminal domain composed of six beta-strands, and a Rossmann-like C- terminal domain []. The larger C-terminal catalytic core domain consists of a seven-stranded beta-sheet flanked by nine alpha helices. This domain resembles a topology observed in a number of nucleotide and dinucleotide-binding enzymes, and in S-adenosyl-L-methionine (AdoMet)- dependent methyltransferase (MTases) [].; GO: 0003824 catalytic activity; PDB: 2E5W_C 2ZSU_E 2O0L_B 2O05_B 2O06_B 2O07_B 3RW9_B 2PWP_A 2HTE_B 3RIE_B ....
Probab=95.16 E-value=0.087 Score=45.93 Aligned_cols=96 Identities=14% Similarity=0.143 Sum_probs=63.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC----C------cEEEcCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG----V------TEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g----~------~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
+.++|||+|.|. |..+-.++++....+|.+++.+++-.+.++++- . -+++.. +-.+.+++...
T Consensus 76 ~p~~VLiiGgG~-G~~~~ell~~~~~~~i~~VEiD~~Vv~~a~~~f~~~~~~~~d~r~~i~~~------Dg~~~l~~~~~ 148 (246)
T PF01564_consen 76 NPKRVLIIGGGD-GGTARELLKHPPVESITVVEIDPEVVELARKYFPEFSEGLDDPRVRIIIG------DGRKFLKETQE 148 (246)
T ss_dssp ST-EEEEEESTT-SHHHHHHTTSTT-SEEEEEES-HHHHHHHHHHTHHHHTTGGSTTEEEEES------THHHHHHTSSS
T ss_pred CcCceEEEcCCC-hhhhhhhhhcCCcceEEEEecChHHHHHHHHhchhhccccCCCceEEEEh------hhHHHHHhccC
Confidence 688999998655 555667777775558999999988888776631 1 133332 23334444332
Q ss_pred CCccEEE-EcCC---------cHHHHHHHHHHhhcCCcEEEEec
Q 020435 209 GGADYCF-ECVG---------LASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 209 ~g~d~v~-d~~g---------~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+.+|+|+ |... +.+.++.+.+.|+++ |.++.-.
T Consensus 149 ~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~~-Gv~v~~~ 191 (246)
T PF01564_consen 149 EKYDVIIVDLTDPDGPAPNLFTREFYQLCKRRLKPD-GVLVLQA 191 (246)
T ss_dssp T-EEEEEEESSSTTSCGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred CcccEEEEeCCCCCCCcccccCHHHHHHHHhhcCCC-cEEEEEc
Confidence 2899998 6554 346788999999998 9998765
No 413
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.16 E-value=0.33 Score=42.47 Aligned_cols=94 Identities=22% Similarity=0.267 Sum_probs=61.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc---EEEcCCCCCCccHHHHHHHhcCCC
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT---EFVNSKNCGDKSVSQIIIDMTDGG 210 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~---~vi~~~~~~~~~~~~~i~~~~~~g 210 (326)
.++.+||-.|+|. |..+..+++. |. +|++++.+++..+.+++ .|.. .++.. +.. .+.....+.
T Consensus 43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~-~l~~~~~~~ 112 (255)
T PRK11036 43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQ-DIAQHLETP 112 (255)
T ss_pred CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHH-HHhhhcCCC
Confidence 4567999988766 6777777765 76 89999999998887764 2321 22221 111 222222348
Q ss_pred ccEEEEcC-----Cc-HHHHHHHHHHhhcCCcEEEEec
Q 020435 211 ADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 211 ~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+|+|+... .. ...+..+.+.|+++ |.++.+-
T Consensus 113 fD~V~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~~ 149 (255)
T PRK11036 113 VDLILFHAVLEWVADPKSVLQTLWSVLRPG-GALSLMF 149 (255)
T ss_pred CCEEEehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence 99998432 22 23477889999998 9997653
No 414
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.15 E-value=0.27 Score=44.66 Aligned_cols=88 Identities=24% Similarity=0.294 Sum_probs=62.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEE-Ec
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF-EC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~-d~ 217 (326)
.|.++-|+|.|.||++.++.++..|. +|+..++++. .+..+..++..+ ++.+.+. ..|++. .|
T Consensus 145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~-----~sDii~l~~ 208 (324)
T COG1052 145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV---------DLDELLA-----ESDIISLHC 208 (324)
T ss_pred CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec---------cHHHHHH-----hCCEEEEeC
Confidence 48899999999999999999999999 9999998876 333344444332 1233332 378875 66
Q ss_pred CCcHHHH----HHHHHHhhcCCcEEEEecc
Q 020435 218 VGLASLV----QEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 218 ~g~~~~~----~~~~~~l~~~~G~~v~~g~ 243 (326)
...+.+. ...+..++++ ..+|-++.
T Consensus 209 Plt~~T~hLin~~~l~~mk~g-a~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPG-AILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCC-eEEEECCC
Confidence 6665522 2567788887 88887764
No 415
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.15 E-value=0.17 Score=43.55 Aligned_cols=38 Identities=26% Similarity=0.294 Sum_probs=33.0
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI 179 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~ 179 (326)
.+++|+|+ |.+|..+++.+...|. +|+++++++++.+.
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~ 40 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLER 40 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHH
Confidence 47999987 9999999999988898 99999998876654
No 416
>PLN03075 nicotianamine synthase; Provisional
Probab=95.15 E-value=0.17 Score=45.10 Aligned_cols=97 Identities=13% Similarity=0.129 Sum_probs=63.7
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHHhcC-----CcEEEcCCCCCCccHHHHHHHhcCCCcc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGAD 212 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~-g~~~V~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~i~~~~~~g~d 212 (326)
.+++|+-+|+|+.++.++.+++.. ...+++.++.+++..+.+++.- ...-+.... .+..+... ..+++|
T Consensus 123 ~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~---~Da~~~~~--~l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT---ADVMDVTE--SLKEYD 197 (296)
T ss_pred CCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE---Cchhhccc--ccCCcC
Confidence 789999999999888888888654 3338999999999988877532 111111111 22222110 113899
Q ss_pred EEEEcC-------CcHHHHHHHHHHhhcCCcEEEEe
Q 020435 213 YCFECV-------GLASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 213 ~v~d~~-------g~~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+||-.+ .-...+....+.|+++ |.+++=
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr 232 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLR 232 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCC-cEEEEe
Confidence 998544 2244578899999997 777654
No 417
>PLN02233 ubiquinone biosynthesis methyltransferase
Probab=95.13 E-value=0.36 Score=42.47 Aligned_cols=103 Identities=18% Similarity=0.270 Sum_probs=66.3
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhc-C------Cc--EEEcCCCCCCccHHHH
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRF-G------VT--EFVNSKNCGDKSVSQI 202 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~~-g------~~--~vi~~~~~~~~~~~~~ 202 (326)
+...+.++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++. . .+ .++..+. .++
T Consensus 67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~---~~l--- 139 (261)
T PLN02233 67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDA---TDL--- 139 (261)
T ss_pred HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccc---ccC---
Confidence 345677899999998865 5566777776652 2899999999988877532 1 11 1221111 110
Q ss_pred HHHhcCCCccEEEEcCC------cHHHHHHHHHHhhcCCcEEEEeccCC
Q 020435 203 IIDMTDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGVDQ 245 (326)
Q Consensus 203 i~~~~~~g~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~~~ 245 (326)
...++.+|.|+-... -...++++.+.|+|+ |+++......
T Consensus 140 --p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~ 185 (261)
T PLN02233 140 --PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK 185 (261)
T ss_pred --CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence 111227999975332 234578999999998 9998886543
No 418
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.12 E-value=0.15 Score=43.78 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=47.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-HHH----HHhcCCc-EEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-FEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~-~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.++||+|+ |.+|..+++.+...|+ +|+++.++.++ .+. ++..+.. ..+ |..+ .+++.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~--~~~~~~~~~~~~~~ 80 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD--AESVERAVDEAKAE 80 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHHH
Confidence 3568999987 9999999999998999 78777665442 221 2223322 222 2222 2223333333322
Q ss_pred -CCccEEEEcCCc
Q 020435 209 -GGADYCFECVGL 220 (326)
Q Consensus 209 -~g~d~v~d~~g~ 220 (326)
+++|.++.+.+.
T Consensus 81 ~~~id~vi~~ag~ 93 (248)
T PRK05557 81 FGGVDILVNNAGI 93 (248)
T ss_pred cCCCCEEEECCCc
Confidence 278999998874
No 419
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.09 E-value=0.22 Score=44.49 Aligned_cols=70 Identities=20% Similarity=0.175 Sum_probs=50.1
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcH
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 221 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~ 221 (326)
+|.|+|.|.+|..++..+...|. +|++.++++++.+.+.+.|.... .+..+.+. ..|+||.|+...
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~--------~~~~~~~~-----~aDivi~~vp~~ 66 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA--------ETARQVTE-----QADVIFTMVPDS 66 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc--------CCHHHHHh-----cCCEEEEecCCH
Confidence 47788999999988888888898 89999999999888877665211 12222221 478888888765
Q ss_pred HHHH
Q 020435 222 SLVQ 225 (326)
Q Consensus 222 ~~~~ 225 (326)
....
T Consensus 67 ~~~~ 70 (291)
T TIGR01505 67 PQVE 70 (291)
T ss_pred HHHH
Confidence 4333
No 420
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.08 E-value=0.18 Score=47.17 Aligned_cols=105 Identities=15% Similarity=0.212 Sum_probs=61.5
Q ss_pred ccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH-------HHHhc-CCcEE-EcCCCCCCccHHHHHHH
Q 020435 136 NVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE-------IGKRF-GVTEF-VNSKNCGDKSVSQIIID 205 (326)
Q Consensus 136 ~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~-------~~~~~-g~~~v-i~~~~~~~~~~~~~i~~ 205 (326)
+...+.+|||+|+ |.+|..+++.+...|. +|++++++..+.+ ..... ++..+ .|..+ .+.+.+.++.
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d--~~~l~~~~~~ 132 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD--ADSLRKVLFS 132 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC--HHHHHHHHHH
Confidence 3456789999987 9999999999988898 9999998765421 11112 23222 22222 1223323332
Q ss_pred hcCCCccEEEEcCCcHH------------HHHHHHHHhhcC-CcEEEEeccC
Q 020435 206 MTDGGADYCFECVGLAS------------LVQEAYACCRKG-WGKTIVLGVD 244 (326)
Q Consensus 206 ~~~~g~d~v~d~~g~~~------------~~~~~~~~l~~~-~G~~v~~g~~ 244 (326)
. +.++|+||+|.+... ....+++.+... .+++|.++..
T Consensus 133 ~-~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~ 183 (390)
T PLN02657 133 E-GDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAI 183 (390)
T ss_pred h-CCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeec
Confidence 2 116999999886421 122344444433 1468877653
No 421
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.08 E-value=0.18 Score=45.33 Aligned_cols=81 Identities=21% Similarity=0.291 Sum_probs=48.0
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHH----HHHhcCCcEEEcCCCCCCcc-HHHHHHHhc-CCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFE----IGKRFGVTEFVNSKNCGDKS-VSQIIIDMT-DGG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~-~~~~----~~~~~g~~~vi~~~~~~~~~-~~~~i~~~~-~~g 210 (326)
.+.++||+|+ |++|..+++.+...|+ +|+++++.. ++.+ .++..|.......-+..+.+ ..+.+.+.. -++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4679999987 8999999999888999 888887643 2222 23334432222111211122 222222111 248
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++|+++|.
T Consensus 90 iD~li~nAG~ 99 (306)
T PRK07792 90 LDIVVNNAGI 99 (306)
T ss_pred CCEEEECCCC
Confidence 9999998874
No 422
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.05 E-value=0.28 Score=44.65 Aligned_cols=91 Identities=18% Similarity=0.119 Sum_probs=64.8
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcE-----------EEcCCCCCCccHHHHHHHhcC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-----------FVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~-----------vi~~~~~~~~~~~~~i~~~~~ 208 (326)
..+|.|+|+|.+|.+.+..+...|. +|.+..+++++.+.+.+.+... +... .+..+.+
T Consensus 4 ~m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~-----~~~~e~~----- 72 (328)
T PRK14618 4 GMRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPT-----ADPEEAL----- 72 (328)
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEe-----CCHHHHH-----
Confidence 3579999999999999999888898 8999999888777665532110 1111 1222222
Q ss_pred CCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 209 GGADYCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 209 ~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+.+|+||-|+.... ....+..++++ -.++.+..
T Consensus 73 ~~aD~Vi~~v~~~~-~~~v~~~l~~~-~~vi~~~~ 105 (328)
T PRK14618 73 AGADFAVVAVPSKA-LRETLAGLPRA-LGYVSCAK 105 (328)
T ss_pred cCCCEEEEECchHH-HHHHHHhcCcC-CEEEEEee
Confidence 26899999999987 77888888886 66666654
No 423
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=95.02 E-value=0.19 Score=41.35 Aligned_cols=33 Identities=27% Similarity=0.226 Sum_probs=29.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 174 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~ 174 (326)
+|+|.|+|++|..+++.+...|.+++..++.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 589999999999999999889997899988765
No 424
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.02 E-value=0.16 Score=43.90 Aligned_cols=81 Identities=16% Similarity=0.134 Sum_probs=48.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEE-EcCChhHHHH----HHhcCCc-EEEcCCCCCCccHHHHHHHhcC--C
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIG-VDVISEKFEI----GKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~-~~~~~~~~~~----~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~ 209 (326)
++.++||+|+ |.+|..+++.+...|+ +|+. ..++.++.+. ++..+.. ..+..+-.+.++..+.+.+... +
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3579999987 9999999999998998 7765 4566554433 2333432 2222221012233333333322 3
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 79999998873
No 425
>PRK08328 hypothetical protein; Provisional
Probab=95.01 E-value=0.16 Score=43.83 Aligned_cols=35 Identities=29% Similarity=0.396 Sum_probs=30.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
.+.+|+|.|+|++|..+++.+...|.++++.++.+
T Consensus 26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 35789999999999999999999999888888743
No 426
>TIGR00417 speE spermidine synthase. the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.
Probab=94.98 E-value=0.27 Score=43.51 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=61.0
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-C---------cEEEcCCCCCCccHHHHHHHhc
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-V---------TEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g-~---------~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
..+++||++|+|. |..+..+++.....++++++.+++-.+.+++.- . -.++. .+..+.+++ .
T Consensus 71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~------~D~~~~l~~-~ 142 (270)
T TIGR00417 71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQI------DDGFKFLAD-T 142 (270)
T ss_pred CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEE------CchHHHHHh-C
Confidence 4566999998765 445556667664558999999888777766521 0 01121 122333333 2
Q ss_pred CCCccEEE-EcC---C------cHHHHHHHHHHhhcCCcEEEEec
Q 020435 208 DGGADYCF-ECV---G------LASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 208 ~~g~d~v~-d~~---g------~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.+.+|+|+ |.. + ....++.+.+.|+++ |.++...
T Consensus 143 ~~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~ 186 (270)
T TIGR00417 143 ENTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS 186 (270)
T ss_pred CCCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence 34899998 443 1 234467889999998 9998764
No 427
>PRK08278 short chain dehydrogenase; Provisional
Probab=94.98 E-value=0.15 Score=44.92 Aligned_cols=79 Identities=27% Similarity=0.333 Sum_probs=49.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhH-------H----HHHHhcCCc-EE--EcCCCCCCccHHHHH
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEK-------F----EIGKRFGVT-EF--VNSKNCGDKSVSQII 203 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~-------~----~~~~~~g~~-~v--i~~~~~~~~~~~~~i 203 (326)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.+. . +.++..+.. +. .|..+ .+++.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~ 81 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD--EDQVAAAV 81 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHH
Confidence 4578999987 9999999999988999 89999986542 1 112233332 22 23222 22333333
Q ss_pred HHhcC--CCccEEEEcCCc
Q 020435 204 IDMTD--GGADYCFECVGL 220 (326)
Q Consensus 204 ~~~~~--~g~d~v~d~~g~ 220 (326)
.+... +.+|++|+++|.
T Consensus 82 ~~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 82 AKAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHHhCCCCEEEECCCC
Confidence 33221 279999998874
No 428
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=94.98 E-value=0.17 Score=47.40 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCC-cEEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGV-TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~-~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
.+++++|+|+ |++|.++++.+...|+ +|+++++++++.+... ..+. ...+..+- .+ .+.+.+.. +++|+++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dv---sd-~~~v~~~l-~~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQV---GQ-EAALAELL-EKVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeC---CC-HHHHHHHh-CCCCEEE
Confidence 4789999987 9999999998888999 9999998776654321 1111 12222111 11 22333333 3799999
Q ss_pred EcCCc
Q 020435 216 ECVGL 220 (326)
Q Consensus 216 d~~g~ 220 (326)
+++|.
T Consensus 251 nnAGi 255 (406)
T PRK07424 251 INHGI 255 (406)
T ss_pred ECCCc
Confidence 88764
No 429
>PLN02928 oxidoreductase family protein
Probab=94.97 E-value=0.17 Score=46.57 Aligned_cols=96 Identities=23% Similarity=0.370 Sum_probs=59.2
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcC-----CcEEEcCCCCCCccHHHHHHHhcCCCccE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFG-----VTEFVNSKNCGDKSVSQIIIDMTDGGADY 213 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g-----~~~vi~~~~~~~~~~~~~i~~~~~~g~d~ 213 (326)
.|.+|.|+|.|.+|..+++.++.+|+ +|++.+++..+... ..++ ...+.+... ...++.+.+. ..|+
T Consensus 158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~L~ell~-----~aDi 229 (347)
T PLN02928 158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEPE-DGLLIPNGDVDDLVDEKG-GHEDIYEFAG-----EADI 229 (347)
T ss_pred CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhhh-hhhccccccccccccccC-cccCHHHHHh-----hCCE
Confidence 47899999999999999999999999 99999876432211 1110 001110000 0123333332 3789
Q ss_pred EEEcCCcHH-----HHHHHHHHhhcCCcEEEEecc
Q 020435 214 CFECVGLAS-----LVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 214 v~d~~g~~~-----~~~~~~~~l~~~~G~~v~~g~ 243 (326)
|+.+..... +-...+..|+++ ..+|.++.
T Consensus 230 Vvl~lPlt~~T~~li~~~~l~~Mk~g-a~lINvaR 263 (347)
T PLN02928 230 VVLCCTLTKETAGIVNDEFLSSMKKG-ALLVNIAR 263 (347)
T ss_pred EEECCCCChHhhcccCHHHHhcCCCC-eEEEECCC
Confidence 887665322 123667888887 87877764
No 430
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=94.97 E-value=0.098 Score=45.16 Aligned_cols=78 Identities=17% Similarity=0.161 Sum_probs=46.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhH-HHHH---HhcCCcEE---EcCCCCCCccHHHHHHHhcC--
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEK-FEIG---KRFGVTEF---VNSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~-~~~~-~~~~---~~~g~~~v---i~~~~~~~~~~~~~i~~~~~-- 208 (326)
+.++||+|+ |.+|..+++.+...|+ +|+.+.. +..+ .+.+ +..+.... .|..+ ..++.+.+.+...
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD--WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC--HHHHHHHHHHHHHHh
Confidence 578899987 9999999999999999 7777543 2222 2222 33343322 22222 1223333333221
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++++.+.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 389999999875
No 431
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.97 E-value=0.15 Score=45.92 Aligned_cols=102 Identities=13% Similarity=0.041 Sum_probs=66.7
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHH-HhcCCc--EEEcCCCCCCccHHHHHHHhcCCCccE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIG-KRFGVT--EFVNSKNCGDKSVSQIIIDMTDGGADY 213 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~-~g~~~V~~~~~~~~~~~~~-~~~g~~--~vi~~~~~~~~~~~~~i~~~~~~g~d~ 213 (326)
....+++|+|+|..|.+.++.+.. .+.++|.+..+++++.+.+ .++... .+. . .+..+.+. ++|+
T Consensus 123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~-----~~~~~av~-----~aDi 191 (304)
T PRK07340 123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-P-----LDGEAIPE-----AVDL 191 (304)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-E-----CCHHHHhh-----cCCE
Confidence 456799999999999998888864 6776899999998886654 334211 111 1 12333332 6999
Q ss_pred EEEcCCcHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccH
Q 020435 214 CFECVGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSS 254 (326)
Q Consensus 214 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~ 254 (326)
|+.|..+..-+-..+ ++++ -++..+|...+ ..-.++.
T Consensus 192 VitaT~s~~Pl~~~~--~~~g-~hi~~iGs~~p-~~~El~~ 228 (304)
T PRK07340 192 VVTATTSRTPVYPEA--ARAG-RLVVAVGAFTP-DMAELAP 228 (304)
T ss_pred EEEccCCCCceeCcc--CCCC-CEEEecCCCCC-CcccCCH
Confidence 998888755332333 7887 88888886543 2334443
No 432
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.96 E-value=0.12 Score=47.45 Aligned_cols=77 Identities=13% Similarity=0.050 Sum_probs=49.2
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH-HhcC--Cc-EEEcCCCCCCccHHHHHHHhcCC-Ccc
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG-KRFG--VT-EFVNSKNCGDKSVSQIIIDMTDG-GAD 212 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~-~~~g--~~-~vi~~~~~~~~~~~~~i~~~~~~-g~d 212 (326)
++.+|||+|+ |.+|..+++.+...|. +|++++++++..... ..++ .. ..+..+- .+ .+.+.+...+ ++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl---~~-~~~~~~~~~~~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDI---RD-AAKLRKAIAEFKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccC---CC-HHHHHHHHhhcCCC
Confidence 4689999987 9999999999999998 899998776543221 1121 11 1121111 11 2334444444 789
Q ss_pred EEEEcCCc
Q 020435 213 YCFECVGL 220 (326)
Q Consensus 213 ~v~d~~g~ 220 (326)
+||++++.
T Consensus 78 ~vih~A~~ 85 (349)
T TIGR02622 78 IVFHLAAQ 85 (349)
T ss_pred EEEECCcc
Confidence 99998873
No 433
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=94.95 E-value=0.3 Score=41.93 Aligned_cols=75 Identities=19% Similarity=0.235 Sum_probs=55.9
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh--cCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR--FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~--~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
+++|.|+|.+|..+++.+...|. .|++++.++++.+...+ +.. +++..+. .-.+.+++.--..+|+++-+.+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~----t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA----TDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC----CCHHHHHhcCCCcCCEEEEeeC
Confidence 68899999999999999999998 99999999999887433 544 4544333 2233455543338999998888
Q ss_pred cHH
Q 020435 220 LAS 222 (326)
Q Consensus 220 ~~~ 222 (326)
...
T Consensus 76 ~d~ 78 (225)
T COG0569 76 NDE 78 (225)
T ss_pred CCH
Confidence 855
No 434
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=94.95 E-value=0.2 Score=44.59 Aligned_cols=68 Identities=19% Similarity=0.282 Sum_probs=50.0
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcH
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 221 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~ 221 (326)
+|.|+|.|.+|..++..++..|. +|++.++++++.+.+.+.|.-... . .+. +.+ ..+|+||-|+...
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~---~~~-~~~-----~~aDlVilavp~~ 68 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S---TDL-SLL-----KDCDLVILALPIG 68 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c---CCH-hHh-----cCCCEEEEcCCHH
Confidence 68899999999988888888898 899999999988888777642111 1 111 111 2689999988866
Q ss_pred H
Q 020435 222 S 222 (326)
Q Consensus 222 ~ 222 (326)
.
T Consensus 69 ~ 69 (279)
T PRK07417 69 L 69 (279)
T ss_pred H
Confidence 5
No 435
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.92 E-value=0.17 Score=43.48 Aligned_cols=80 Identities=23% Similarity=0.321 Sum_probs=48.6
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHHH----hcCCc-EEEcCCCCCCccHHHHHHHhcC--CC
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIGK----RFGVT-EFVNSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~-~~~~~~~~~~~----~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g 210 (326)
+.++||+|+ |.+|..++..+...|+ +|+.+ .++.++.+.+. ..+.. .++..+-.+.+++.+.+.+... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999987 9999999988888899 88888 88776654332 22221 2222221011223232332222 27
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++|.+.+.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999988874
No 436
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=94.91 E-value=0.095 Score=46.36 Aligned_cols=79 Identities=19% Similarity=0.258 Sum_probs=53.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc------EEEcCCCCCCcc---HHHHHH
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT------EFVNSKNCGDKS---VSQIII 204 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~------~vi~~~~~~~~~---~~~~i~ 204 (326)
.+.++||+|+ .+||.+++..+...|+ +|+.+.+++++.+.... .+.. .+.|..+ .++ +.+...
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~l~~~~~ 83 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK--EVDVEKLVEFAV 83 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC--HHHHHHHHHHHH
Confidence 5788999987 8999999999999999 99999999988665432 2221 1223322 122 222333
Q ss_pred HhcCCCccEEEEcCCc
Q 020435 205 DMTDGGADYCFECVGL 220 (326)
Q Consensus 205 ~~~~~g~d~v~d~~g~ 220 (326)
+.+.++.|+.++..|.
T Consensus 84 ~~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 84 EKFFGKIDILVNNAGA 99 (270)
T ss_pred HHhCCCCCEEEEcCCc
Confidence 3334589999998775
No 437
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=94.89 E-value=0.42 Score=37.07 Aligned_cols=94 Identities=18% Similarity=0.240 Sum_probs=56.8
Q ss_pred EEEEcc-CHHHHHHHHHHHHcC--CCEEEEEcCChhH---HHHHHhcCCcEEEcCCCCCCccH---H-------------
Q 020435 143 VVIFGL-GSIGLAVAEGARLCG--ATRIIGVDVISEK---FEIGKRFGVTEFVNSKNCGDKSV---S------------- 200 (326)
Q Consensus 143 vlI~Ga-g~~G~~a~~la~~~g--~~~V~~~~~~~~~---~~~~~~~g~~~vi~~~~~~~~~~---~------------- 200 (326)
|.|.|+ |.+|..++...+... . +|+++.....- .+.+++|.+..+.-.++ ... .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~ 76 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL 76 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence 578898 999999999999876 4 77777643332 23456688777665443 211 1
Q ss_pred ---HHHHHhcCC-CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEec
Q 020435 201 ---QIIIDMTDG-GADYCFECVGLASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 201 ---~~i~~~~~~-g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+.+.++... .+|+|+.++.+-..+.-.+.+++.+ +-+.+.
T Consensus 77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g--k~iaLA 120 (129)
T PF02670_consen 77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG--KDIALA 120 (129)
T ss_dssp ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT--SEEEE-
T ss_pred eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC--CeEEEe
Confidence 112233333 7888888777776677778888874 444443
No 438
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=94.88 E-value=0.28 Score=41.24 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=30.5
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|.|+|++|.-+++.+-..|.+++..++.+
T Consensus 20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 36799999999999999999999999888888744
No 439
>PRK09135 pteridine reductase; Provisional
Probab=94.88 E-value=0.18 Score=43.49 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=30.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS 174 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~ 174 (326)
.+.++||+|+ |.+|..+++.+...|+ +|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCC
Confidence 4578999987 9999999999888899 999998753
No 440
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=94.87 E-value=0.093 Score=45.96 Aligned_cols=76 Identities=17% Similarity=0.278 Sum_probs=48.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcE-EEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTE-FVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~-vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
.+.++||+|+ |.+|.++++.+...|+ +|+.++++.++.+. ..... ..|..+ ..++.+.+.+... +++|++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~--~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS--AEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC--HHHHHHHHHHHHHHcCCCCEE
Confidence 3678999987 9999999999999999 89999877654321 11111 122222 1233333333322 379999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
+++.|.
T Consensus 82 i~~Ag~ 87 (266)
T PRK06171 82 VNNAGI 87 (266)
T ss_pred EECCcc
Confidence 998873
No 441
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=94.86 E-value=0.15 Score=44.64 Aligned_cols=102 Identities=20% Similarity=0.288 Sum_probs=61.0
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChh------HHHHHHhcC-CcEEE--cCCCCCCccHHHHHHHh
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISE------KFEIGKRFG-VTEFV--NSKNCGDKSVSQIIIDM 206 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~~------~~~~~~~~g-~~~vi--~~~~~~~~~~~~~i~~~ 206 (326)
.+.++||+|+ +++|.++++.+...|+ +|+.+.++.+ ..+.+.+.+ ....+ |..+ .++..+.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~v~~~~~~~ 81 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD--DAQIEETFETI 81 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC--HHHHHHHHHHH
Confidence 4678999985 4899999999988999 8887754322 222332222 11222 2222 23333333333
Q ss_pred cC--CCccEEEEcCCcH-------H----------------------HHHHHHHHhhcCCcEEEEeccC
Q 020435 207 TD--GGADYCFECVGLA-------S----------------------LVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 207 ~~--~g~d~v~d~~g~~-------~----------------------~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.. +++|++++++|.. . ..+.++..++.+ |+++.++..
T Consensus 82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~ 149 (258)
T PRK07370 82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYL 149 (258)
T ss_pred HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEecc
Confidence 22 3799999988731 0 123456667777 898888753
No 442
>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase.
Probab=94.84 E-value=0.42 Score=42.11 Aligned_cols=100 Identities=14% Similarity=0.178 Sum_probs=60.9
Q ss_pred hcccCCCCEEEEEccCHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHHH----hcCCcEEEcCCCCCCccHHHHHHHhcC
Q 020435 134 TANVEVGSTVVIFGLGSIGLAVAEGARLCG-ATRIIGVDVISEKFEIGK----RFGVTEFVNSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 134 ~~~~~~~~~vlI~Gag~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~~----~~g~~~vi~~~~~~~~~~~~~i~~~~~ 208 (326)
...+++|++||=.|+|+ |...+.+++.++ ...|++++.++++.+.++ ..|.+.+..... +.. .+.. ..
T Consensus 66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~----D~~-~~~~-~~ 138 (264)
T TIGR00446 66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF----DGR-VFGA-AV 138 (264)
T ss_pred HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC----CHH-Hhhh-hc
Confidence 45678899999888755 444555555543 238999999999887664 356543221111 111 1111 12
Q ss_pred CCccEEE-E--cCCc-------------------------HHHHHHHHHHhhcCCcEEEEe
Q 020435 209 GGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 209 ~g~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+.+|.|+ | |.|. ...+..+++.++++ |+++..
T Consensus 139 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYs 198 (264)
T TIGR00446 139 PKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYS 198 (264)
T ss_pred cCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence 2699997 5 3432 12567888899998 988644
No 443
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.84 E-value=0.23 Score=44.99 Aligned_cols=39 Identities=21% Similarity=0.153 Sum_probs=34.1
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIG 180 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~ 180 (326)
.+|.|+|+|.+|...++.+...|. .|.+.+.+++..+.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 589999999999999999888999 999999998766543
No 444
>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.77 E-value=0.17 Score=50.75 Aligned_cols=77 Identities=27% Similarity=0.296 Sum_probs=51.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh---------------------HHHHHHhcCCcEEEcCCCCCC
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE---------------------KFEIGKRFGVTEFVNSKNCGD 196 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~---------------------~~~~~~~~g~~~vi~~~~~~~ 196 (326)
..+.+|+|+|+|+.|+.++..++..|. +|+++++.+. ..++++++|++...+..-..+
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 8998886532 244556677654333211000
Q ss_pred ccHHHHHHHhcCCCccEEEEcCCc
Q 020435 197 KSVSQIIIDMTDGGADYCFECVGL 220 (326)
Q Consensus 197 ~~~~~~i~~~~~~g~d~v~d~~g~ 220 (326)
..+ +.+. .++|.||.+.|.
T Consensus 404 i~~-~~~~----~~~DavilAtGa 422 (654)
T PRK12769 404 ISL-ESLL----EDYDAVFVGVGT 422 (654)
T ss_pred CCH-HHHH----hcCCEEEEeCCC
Confidence 111 1121 268999988885
No 445
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.76 E-value=0.41 Score=40.90 Aligned_cols=100 Identities=20% Similarity=0.220 Sum_probs=60.5
Q ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hcCCcEEE---------cCCCCCCcc-HHHHHH
Q 020435 136 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RFGVTEFV---------NSKNCGDKS-VSQIII 204 (326)
Q Consensus 136 ~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~g~~~vi---------~~~~~~~~~-~~~~i~ 204 (326)
...++.+||+.|+|. |.-++.||. .|. .|++++.++...+.+. +.+..... ...+ -. +...+.
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~---v~~~~~D~~ 107 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGE---ITIYCGDFF 107 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCc---eEEEECccc
Confidence 445678999998876 677777765 698 9999999999888653 23221000 0000 00 000011
Q ss_pred Hhc--C-CCccEEEEcCCc--------HHHHHHHHHHhhcCCcEEEEec
Q 020435 205 DMT--D-GGADYCFECVGL--------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 205 ~~~--~-~g~d~v~d~~g~--------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
++. . +.+|.|+|...- ...++.+.++|+++ |+++++.
T Consensus 108 ~l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~~ 155 (218)
T PRK13255 108 ALTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLVT 155 (218)
T ss_pred CCCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEEE
Confidence 111 1 268999986531 23377889999998 9866544
No 446
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=94.75 E-value=0.24 Score=43.23 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=47.9
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHHH-Hh----cCCc-EEE--cCCCCCCccHHHHHHHhcC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEIG-KR----FGVT-EFV--NSKNCGDKSVSQIIIDMTD 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~-~~~~~~~~-~~----~g~~-~vi--~~~~~~~~~~~~~i~~~~~ 208 (326)
++.++||+|+ +++|.++++.+...|+ +|+.+.+ ++++.+.+ ++ .+.+ +.+ |..+ .+++.+.+.+...
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~ 83 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE--PETYKELFKKIDE 83 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC--HHHHHHHHHHHHH
Confidence 4789999987 8999999999999999 8887754 44443322 11 2321 222 2222 2233333333322
Q ss_pred --CCccEEEEcCC
Q 020435 209 --GGADYCFECVG 219 (326)
Q Consensus 209 --~g~d~v~d~~g 219 (326)
+.+|+++++++
T Consensus 84 ~~g~id~lv~nAg 96 (260)
T PRK08416 84 DFDRVDFFISNAI 96 (260)
T ss_pred hcCCccEEEECcc
Confidence 37999998875
No 447
>PRK05855 short chain dehydrogenase; Validated
Probab=94.72 E-value=0.16 Score=49.74 Aligned_cols=79 Identities=19% Similarity=0.221 Sum_probs=52.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
.+.++||+|+ |++|..+++.+...|. +|+.++++.++.+.+. ..|.. .++ |..+ .+...+.+.+...
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD--ADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHhc
Confidence 3578999987 9999999999988999 8999999887765432 23431 222 2222 1223333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+.+|++++++|.
T Consensus 391 g~id~lv~~Ag~ 402 (582)
T PRK05855 391 GVPDIVVNNAGI 402 (582)
T ss_pred CCCcEEEECCcc
Confidence 379999999875
No 448
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=94.70 E-value=0.39 Score=42.97 Aligned_cols=70 Identities=16% Similarity=0.164 Sum_probs=49.6
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCCcH
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVGLA 221 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g~~ 221 (326)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|... . .++.+.+. ..|+||.|+...
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~-~-------~~~~e~~~-----~~d~vi~~vp~~ 69 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAET-A-------STAKAVAE-----QCDVIITMLPNS 69 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCee-c-------CCHHHHHh-----cCCEEEEeCCCH
Confidence 68999999999988887778888 8999999998888777666521 1 12222221 478888888754
Q ss_pred HHHH
Q 020435 222 SLVQ 225 (326)
Q Consensus 222 ~~~~ 225 (326)
....
T Consensus 70 ~~~~ 73 (296)
T PRK11559 70 PHVK 73 (296)
T ss_pred HHHH
Confidence 4333
No 449
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=94.70 E-value=0.21 Score=45.12 Aligned_cols=78 Identities=22% Similarity=0.177 Sum_probs=49.9
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcC-CCEEEEEcCChhHHHHH-HhcC---Cc-EE--EcCCCCCCccHHHHHHHhc--C
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCG-ATRIIGVDVISEKFEIG-KRFG---VT-EF--VNSKNCGDKSVSQIIIDMT--D 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g-~~~V~~~~~~~~~~~~~-~~~g---~~-~v--i~~~~~~~~~~~~~i~~~~--~ 208 (326)
+.++||+|+ +++|.++++.+...| . +|+.++++.++.+.+ +++. .. ++ .|..+ .++..+.+.++. .
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS--LDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC--HHHHHHHHHHHHHhC
Confidence 568999997 899999998888889 7 899999888766543 2332 11 12 23222 122333333322 2
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|++|+++|.
T Consensus 80 ~~iD~lI~nAG~ 91 (314)
T TIGR01289 80 RPLDALVCNAAV 91 (314)
T ss_pred CCCCEEEECCCc
Confidence 379999988763
No 450
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=94.67 E-value=0.21 Score=46.22 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=48.7
Q ss_pred CCCCEEEEEcc-CHHHHH--HHHHHHHcCCCEEEEEcCChh--H--------------HHHHHhcCCc-EEEcCCCCCCc
Q 020435 138 EVGSTVVIFGL-GSIGLA--VAEGARLCGATRIIGVDVISE--K--------------FEIGKRFGVT-EFVNSKNCGDK 197 (326)
Q Consensus 138 ~~~~~vlI~Ga-g~~G~~--a~~la~~~g~~~V~~~~~~~~--~--------------~~~~~~~g~~-~vi~~~~~~~~ 197 (326)
..+.++||+|+ +++|++ +++.+ ..|+ +|+++....+ + .+.+++.|.. ..+.-+-.+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 34678999986 899999 56666 8899 8888764221 1 2234455643 23333321223
Q ss_pred cHHHHHHHhcC--CCccEEEEcCCcH
Q 020435 198 SVSQIIIDMTD--GGADYCFECVGLA 221 (326)
Q Consensus 198 ~~~~~i~~~~~--~g~d~v~d~~g~~ 221 (326)
...+.+.++.. |++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 33333333322 3899999999876
No 451
>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]
Probab=94.67 E-value=0.27 Score=45.50 Aligned_cols=59 Identities=20% Similarity=0.215 Sum_probs=43.0
Q ss_pred ccccccccchhhhhhhhhhhhccc-CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh
Q 020435 114 PNRACLLSCGVSTGVGAAWRTANV-EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE 175 (326)
Q Consensus 114 ~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~ 175 (326)
.++|.+..+.+.+- . +.+.... -.|.+|.|.|.|++|+.+++.+...|+ +|++++.+..
T Consensus 182 r~~aTg~Gv~~~~~-~-a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g 241 (411)
T COG0334 182 RSEATGYGVFYAIR-E-ALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG 241 (411)
T ss_pred CCcccceehHHHHH-H-HHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence 34455555433333 2 3344444 379999999999999999999988899 9999987766
No 452
>PF07021 MetW: Methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In P. putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells [].
Probab=94.66 E-value=0.39 Score=39.82 Aligned_cols=71 Identities=23% Similarity=0.275 Sum_probs=55.9
Q ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 136 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 136 ~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
-+++|++||=.|+|. |.++..|....++ ..++++.++++...+.+-|.. |+. .++.+.+....++.||+||
T Consensus 10 ~I~pgsrVLDLGCGd-G~LL~~L~~~k~v-~g~GvEid~~~v~~cv~rGv~-Viq------~Dld~gL~~f~d~sFD~VI 80 (193)
T PF07021_consen 10 WIEPGSRVLDLGCGD-GELLAYLKDEKQV-DGYGVEIDPDNVAACVARGVS-VIQ------GDLDEGLADFPDQSFDYVI 80 (193)
T ss_pred HcCCCCEEEecCCCc-hHHHHHHHHhcCC-eEEEEecCHHHHHHHHHcCCC-EEE------CCHHHhHhhCCCCCccEEe
Confidence 467899999999875 7777777777888 999999999999998888875 443 3455566666656999998
No 453
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=94.66 E-value=0.18 Score=43.63 Aligned_cols=76 Identities=25% Similarity=0.264 Sum_probs=47.5
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCc-EEEcCCCCCCccHHHHHHHhcC--CCccEE
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVT-EFVNSKNCGDKSVSQIIIDMTD--GGADYC 214 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~-~vi~~~~~~~~~~~~~i~~~~~--~g~d~v 214 (326)
+++++||+|+ |.+|..+++.+...|. +|++++++. ....+.. ..+..+-...+.+.+.+.+... +.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999987 8999999999988999 999998775 1222211 2221111011233333333222 379999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
|++.+.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 998875
No 454
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=94.64 E-value=0.23 Score=43.07 Aligned_cols=77 Identities=19% Similarity=0.209 Sum_probs=48.8
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--CC
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~g 210 (326)
.+++|+|+ |.+|..+++.+...|+ +|+.+.+++++.+.+ +..+.. ..+ |..+ .+.+.+.+.+... +.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD--KDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC--HHHHHHHHHHHHHHcCC
Confidence 36899987 9999999999988999 899999887655432 223322 122 2222 1223333333322 27
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+++++.+.
T Consensus 78 id~vi~~ag~ 87 (254)
T TIGR02415 78 FDVMVNNAGV 87 (254)
T ss_pred CCEEEECCCc
Confidence 8999998874
No 455
>PLN00016 RNA-binding protein; Provisional
Probab=94.64 E-value=0.39 Score=44.63 Aligned_cols=95 Identities=16% Similarity=0.126 Sum_probs=60.1
Q ss_pred CCEEEEE----cc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHH-----------HHhcCCcEEEcCCCCCCccHHHHH
Q 020435 140 GSTVVIF----GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEI-----------GKRFGVTEFVNSKNCGDKSVSQII 203 (326)
Q Consensus 140 ~~~vlI~----Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~-----------~~~~g~~~vi~~~~~~~~~~~~~i 203 (326)
..+|||+ |+ |-+|..+++.+...|. +|+++++++..... +...++..+. .++.+ +
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~-------~D~~d-~ 122 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGH-EVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVW-------GDPAD-V 122 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCC-EEEEEecCCcchhhhccCchhhhhHhhhcCceEEE-------ecHHH-H
Confidence 4689999 98 9999999999888898 99999988754321 1223443332 12222 3
Q ss_pred HHhcCC-CccEEEEcCCcHH-HHHHHHHHhhcC-CcEEEEecc
Q 020435 204 IDMTDG-GADYCFECVGLAS-LVQEAYACCRKG-WGKTIVLGV 243 (326)
Q Consensus 204 ~~~~~~-g~d~v~d~~g~~~-~~~~~~~~l~~~-~G~~v~~g~ 243 (326)
.+.... ++|+|+++.+... ....+++.++.. -.++|.++.
T Consensus 123 ~~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 123 KSKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred HhhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 333333 8999999876432 234555666543 136877664
No 456
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase. MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.
Probab=94.59 E-value=0.16 Score=43.52 Aligned_cols=103 Identities=21% Similarity=0.398 Sum_probs=65.3
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHh----cCCcE--EEcCCCCCCccHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKR----FGVTE--FVNSKNCGDKSVSQII 203 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~----~g~~~--vi~~~~~~~~~~~~~i 203 (326)
+.....++++++||-.|+|. |..+..+++..+. .+|++++.+++..+.+++ .+.+. ++..+. .++
T Consensus 37 ~l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---~~~---- 108 (231)
T TIGR02752 37 TMKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNA---MEL---- 108 (231)
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEech---hcC----
Confidence 34556778899999998865 6666778777542 289999999888776653 22221 222111 110
Q ss_pred HHhcCCCccEEEEcCC------cHHHHHHHHHHhhcCCcEEEEecc
Q 020435 204 IDMTDGGADYCFECVG------LASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 204 ~~~~~~g~d~v~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
....+.+|+|+-+.. -...+..+.+.|+++ |.++....
T Consensus 109 -~~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~ 152 (231)
T TIGR02752 109 -PFDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET 152 (231)
T ss_pred -CCCCCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence 111237999974322 123467788999998 99987754
No 457
>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB. The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.
Probab=94.53 E-value=0.38 Score=45.57 Aligned_cols=102 Identities=11% Similarity=0.193 Sum_probs=63.2
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EE--EcCCCCCCccHHHHHH
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EF--VNSKNCGDKSVSQIII 204 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~v--i~~~~~~~~~~~~~i~ 204 (326)
.....+++|++||=.|+|+ |..++.+++.++..+|++++.++++.+.++ ++|.. .+ .+.+. .+. .
T Consensus 231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~---~~~----~ 302 (426)
T TIGR00563 231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG---RGP----S 302 (426)
T ss_pred HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc---ccc----c
Confidence 3456778899999998654 444445555554238999999999887654 35654 22 22221 111 0
Q ss_pred HhcCC-CccEEE-E--cCCc-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 020435 205 DMTDG-GADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 205 ~~~~~-g~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
..... .+|.|| | |.|. ...+..+++.|+++ |+++..-
T Consensus 303 ~~~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvyst 368 (426)
T TIGR00563 303 QWAENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYAT 368 (426)
T ss_pred ccccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence 01122 799998 5 4442 13567788999998 9988653
No 458
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.51 E-value=0.26 Score=42.68 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=47.1
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHH----HHHhcCCc-EEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFE----IGKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~-~~~----~~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
.++||+|+ |.+|..+++.+...|+ +|+.+++... ..+ .++..+.. .++ |..+ ..++.+.+.++.. +
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 79 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVAD--LSAHEAMLDAAQAAWG 79 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 57999987 9999999999988999 8998886543 221 22223321 222 2222 1233333333322 2
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++.+.|.
T Consensus 80 ~id~vi~~ag~ 90 (256)
T PRK12745 80 RIDCLVNNAGV 90 (256)
T ss_pred CCCEEEECCcc
Confidence 79999998874
No 459
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=94.50 E-value=0.33 Score=48.31 Aligned_cols=77 Identities=16% Similarity=0.255 Sum_probs=58.7
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
.++|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|.. ++..+. .-.+.+++.--+.+|.++-+.+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~-v~~GDa----t~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMK-VFYGDA----TRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCe-EEEEeC----CCHHHHHhcCCCcCCEEEEEeC
Confidence 3689999999999999999999998 899999999999999988864 333322 1122333332228999999998
Q ss_pred cHH
Q 020435 220 LAS 222 (326)
Q Consensus 220 ~~~ 222 (326)
++.
T Consensus 474 d~~ 476 (621)
T PRK03562 474 DPQ 476 (621)
T ss_pred CHH
Confidence 866
No 460
>PRK06141 ornithine cyclodeaminase; Validated
Probab=94.49 E-value=0.43 Score=43.24 Aligned_cols=93 Identities=12% Similarity=0.015 Sum_probs=59.4
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHH-cCCCEEEEEcCChhHHHHHH-hc---CCcEEEcCCCCCCccHHHHHHHhcCCCcc
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARL-CGATRIIGVDVISEKFEIGK-RF---GVTEFVNSKNCGDKSVSQIIIDMTDGGAD 212 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~-~g~~~V~~~~~~~~~~~~~~-~~---g~~~vi~~~~~~~~~~~~~i~~~~~~g~d 212 (326)
....+|+|+|+|..|...++.+.. .+..+|.+..+++++.+.+. ++ +.. +... .+..+.+ .++|
T Consensus 123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~-----~~~~~av-----~~aD 191 (314)
T PRK06141 123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVV-----TDLEAAV-----RQAD 191 (314)
T ss_pred CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEe-----CCHHHHH-----hcCC
Confidence 457799999999999988865543 66668999999988876543 33 321 2111 1222223 2599
Q ss_pred EEEEcCCcHHHHHHHHHHhhcCCcEEEEecc
Q 020435 213 YCFECVGLASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 213 ~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+|+.|.++...+ .....++++ -.+..+|.
T Consensus 192 IVi~aT~s~~pv-l~~~~l~~g-~~i~~ig~ 220 (314)
T PRK06141 192 IISCATLSTEPL-VRGEWLKPG-THLDLVGN 220 (314)
T ss_pred EEEEeeCCCCCE-ecHHHcCCC-CEEEeeCC
Confidence 999888875411 112567886 66656654
No 461
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=94.45 E-value=0.25 Score=42.17 Aligned_cols=112 Identities=12% Similarity=0.016 Sum_probs=65.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
++.+|||+|+|.++.-=++.+...|+ +|++++..-. ....+.+.|.-..+. .+ +.+.- + .++++||-|
T Consensus 24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~-----~~~~d--l--~g~~LViaA 92 (223)
T PRK05562 24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN-----YDKEF--I--KDKHLIVIA 92 (223)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC-----CChHH--h--CCCcEEEEC
Confidence 47799999999999887778888898 8888864322 222222233222221 11 11111 1 279999999
Q ss_pred CCcHHHHHHHHHHhhcCCcEEEEeccCCCCCcccccHHHHHhc-CCEE
Q 020435 218 VGLASLVQEAYACCRKGWGKTIVLGVDQPGSQLSLSSFEVLHS-GKIL 264 (326)
Q Consensus 218 ~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~~~i 264 (326)
.+.+..-+......+.. +.++..... .....|-.+.+..+ .+.+
T Consensus 93 TdD~~vN~~I~~~a~~~-~~lvn~vd~--p~~~dFi~PAiv~rg~l~I 137 (223)
T PRK05562 93 TDDEKLNNKIRKHCDRL-YKLYIDCSD--YKKGLCIIPYQRSTKNFVF 137 (223)
T ss_pred CCCHHHHHHHHHHHHHc-CCeEEEcCC--cccCeEEeeeEEecCCEEE
Confidence 99998555666666665 666665432 23344444444443 3444
No 462
>PRK05599 hypothetical protein; Provisional
Probab=94.43 E-value=0.3 Score=42.33 Aligned_cols=75 Identities=13% Similarity=0.213 Sum_probs=47.6
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHH----HhcCCc--EEE--cCCCCCCccHHHHHHHhcC--CC
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIG----KRFGVT--EFV--NSKNCGDKSVSQIIIDMTD--GG 210 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~----~~~g~~--~vi--~~~~~~~~~~~~~i~~~~~--~g 210 (326)
++||+|+ +++|.++++.+. .|. +|+.+.+++++.+.+ ++.+.+ +.+ |..+ .++..+.+.+... ++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d--~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD--LDTHRELVKQTQELAGE 77 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC--HHHHHHHHHHHHHhcCC
Confidence 6899987 899999888776 487 999999988776644 223322 222 2222 2233333333222 38
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|++++++|.
T Consensus 78 id~lv~nag~ 87 (246)
T PRK05599 78 ISLAVVAFGI 87 (246)
T ss_pred CCEEEEecCc
Confidence 9999988874
No 463
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.40 E-value=0.4 Score=38.61 Aligned_cols=93 Identities=15% Similarity=0.087 Sum_probs=57.4
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC------cEEEcCCCCCCccHHHHHHHhcCCCccEEE
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV------TEFVNSKNCGDKSVSQIIIDMTDGGADYCF 215 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~------~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~ 215 (326)
+|.|.|+|+.|.+++..+...|. +|....++++..+.+++.+. ...+...-.-..++.+.+ .+.|+++
T Consensus 1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii 74 (157)
T PF01210_consen 1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII 74 (157)
T ss_dssp EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence 68899999999999999999997 99999999988777754221 111100000002233333 2689999
Q ss_pred EcCCcHHHHHHHHHHhhc---CCcEEEEec
Q 020435 216 ECVGLASLVQEAYACCRK---GWGKTIVLG 242 (326)
Q Consensus 216 d~~g~~~~~~~~~~~l~~---~~G~~v~~g 242 (326)
-++.+.. ++..++.+.+ . +..+..-
T Consensus 75 iavPs~~-~~~~~~~l~~~l~~-~~~ii~~ 102 (157)
T PF01210_consen 75 IAVPSQA-HREVLEQLAPYLKK-GQIIISA 102 (157)
T ss_dssp E-S-GGG-HHHHHHHHTTTSHT-T-EEEET
T ss_pred ecccHHH-HHHHHHHHhhccCC-CCEEEEe
Confidence 8888876 5666666655 2 4555443
No 464
>PTZ00146 fibrillarin; Provisional
Probab=94.40 E-value=0.51 Score=42.02 Aligned_cols=102 Identities=19% Similarity=0.208 Sum_probs=60.9
Q ss_pred hhhcccCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHH----Hh-cCCcEEEcCCCCCCccHHHHHHH
Q 020435 132 WRTANVEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIG----KR-FGVTEFVNSKNCGDKSVSQIIID 205 (326)
Q Consensus 132 ~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~----~~-~g~~~vi~~~~~~~~~~~~~i~~ 205 (326)
++...++++++||=.|+|+ |..+..++...+. .+|++++.+++..+.+ +. .++..++. +. .. ......
T Consensus 125 ~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~-Da---~~-p~~y~~ 198 (293)
T PTZ00146 125 VANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIE-DA---RY-PQKYRM 198 (293)
T ss_pred cceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEEC-Cc---cC-hhhhhc
Confidence 3556789999999998765 6677778887752 3799999886533222 22 23332321 21 00 111111
Q ss_pred hcCCCccEEEEcCCcHH----HHHHHHHHhhcCCcEEEEe
Q 020435 206 MTDGGADYCFECVGLAS----LVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 206 ~~~~g~d~v~d~~g~~~----~~~~~~~~l~~~~G~~v~~ 241 (326)
.. +.+|+||.....+. ....+.+.|+++ |.++..
T Consensus 199 ~~-~~vDvV~~Dva~pdq~~il~~na~r~LKpG-G~~vI~ 236 (293)
T PTZ00146 199 LV-PMVDVIFADVAQPDQARIVALNAQYFLKNG-GHFIIS 236 (293)
T ss_pred cc-CCCCEEEEeCCCcchHHHHHHHHHHhccCC-CEEEEE
Confidence 11 26999985444332 234567799998 999873
No 465
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=94.39 E-value=0.31 Score=41.78 Aligned_cols=77 Identities=19% Similarity=0.232 Sum_probs=46.2
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC-ChhHHHH-HHh---cCCc-EEE--cCCCCCCccHHHHHHHhc--CC
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDV-ISEKFEI-GKR---FGVT-EFV--NSKNCGDKSVSQIIIDMT--DG 209 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~-~~~~~~~-~~~---~g~~-~vi--~~~~~~~~~~~~~i~~~~--~~ 209 (326)
.++||+|+ |.+|..+++.+...|+ +|+++.+ ++++.+. ..+ .+.. .++ |..+ ...+.+.+.++. .+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS--FESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC--HHHHHHHHHHHHHHcC
Confidence 36899987 9999999999988999 8888877 4433322 221 2211 122 2222 122333333332 13
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
.+|++|.+.|.
T Consensus 78 ~id~vi~~ag~ 88 (242)
T TIGR01829 78 PIDVLVNNAGI 88 (242)
T ss_pred CCcEEEECCCC
Confidence 79999998873
No 466
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=94.39 E-value=0.32 Score=44.86 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=31.4
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS 174 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~ 174 (326)
...+|||.|+|++|..+++.+...|.+++..++.+.
T Consensus 27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 357999999999999999999999998888888643
No 467
>PRK07201 short chain dehydrogenase; Provisional
Probab=94.38 E-value=0.2 Score=50.15 Aligned_cols=78 Identities=26% Similarity=0.285 Sum_probs=51.7
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCc-EEE--cCCCCCCccHHHHHHHhcC--C
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVT-EFV--NSKNCGDKSVSQIIIDMTD--G 209 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~-~vi--~~~~~~~~~~~~~i~~~~~--~ 209 (326)
+.++||+|+ |++|..+++.+...|+ +|+++++++++.+.+. ..+.. .++ |..+ .+++.+.+.+... +
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~~~~~~~~~~~~~g 447 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD--SAAVDHTVKDILAEHG 447 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC--HHHHHHHHHHHHHhcC
Confidence 678999987 9999999998888899 9999999887765432 22322 222 2222 1233333333322 2
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|++++++|.
T Consensus 448 ~id~li~~Ag~ 458 (657)
T PRK07201 448 HVDYLVNNAGR 458 (657)
T ss_pred CCCEEEECCCC
Confidence 79999998883
No 468
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=94.37 E-value=0.35 Score=43.71 Aligned_cols=39 Identities=18% Similarity=0.062 Sum_probs=32.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE 178 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~ 178 (326)
.+.+|||+|+ |-+|..+++.+...|. +|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcchH
Confidence 4789999987 9999999998888898 8998887765433
No 469
>PRK07069 short chain dehydrogenase; Validated
Probab=94.36 E-value=0.19 Score=43.42 Aligned_cols=76 Identities=18% Similarity=0.296 Sum_probs=47.3
Q ss_pred EEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCC-hhHHHHHH-hc----CCc--EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 142 TVVIFGL-GSIGLAVAEGARLCGATRIIGVDVI-SEKFEIGK-RF----GVT--EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~-~~~~~~~~-~~----g~~--~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
++||+|+ |.+|..+++.+...|+ +|++++++ .++.+.+. .+ +.. +.+ |..+ .+.+.+.+.+...
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~ 77 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGA-KVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTD--EAQWQALLAQAADAM 77 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCC--HHHHHHHHHHHHHHc
Confidence 3789986 9999999999988899 99999987 55444332 11 111 112 2222 2333333333322
Q ss_pred CCccEEEEcCCc
Q 020435 209 GGADYCFECVGL 220 (326)
Q Consensus 209 ~g~d~v~d~~g~ 220 (326)
+++|+++.++|.
T Consensus 78 ~~id~vi~~ag~ 89 (251)
T PRK07069 78 GGLSVLVNNAGV 89 (251)
T ss_pred CCccEEEECCCc
Confidence 379999998874
No 470
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=94.35 E-value=0.26 Score=44.35 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=52.6
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHH---HHHhcC-Cc---EEEcCCCCCCccHHHHHHHhcCCC
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFE---IGKRFG-VT---EFVNSKNCGDKSVSQIIIDMTDGG 210 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~---~~~~~g-~~---~vi~~~~~~~~~~~~~i~~~~~~g 210 (326)
.+.+|+|+|| |=||..++..+...|. +|.+++|++++.+ .++++. +. .++..+=...+.+.+.+ .|
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY-~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai-----~g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGY-TVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI-----DG 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCC-EEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHH-----hC
Confidence 5789999998 9999999999999999 9999999998743 466654 21 22222211123343333 26
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|.||.++..
T Consensus 79 cdgVfH~Asp 88 (327)
T KOG1502|consen 79 CDGVFHTASP 88 (327)
T ss_pred CCEEEEeCcc
Confidence 9999987664
No 471
>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional
Probab=94.34 E-value=0.72 Score=39.10 Aligned_cols=98 Identities=19% Similarity=0.261 Sum_probs=60.0
Q ss_pred cCCCCEEEEEccCHHHHHHHHHHHHcCC-CEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC-CccEE
Q 020435 137 VEVGSTVVIFGLGSIGLAVAEGARLCGA-TRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG-GADYC 214 (326)
Q Consensus 137 ~~~~~~vlI~Gag~~G~~a~~la~~~g~-~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~-g~d~v 214 (326)
++++++||=+|+|+ |.....+++..+. .+|++++.++.. ..-++ .++..+- .+....+.+.+.... .+|+|
T Consensus 49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~-~~~~~~~~i~~~~~~~~~D~V 121 (209)
T PRK11188 49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDF-RDELVLKALLERVGDSKVQVV 121 (209)
T ss_pred CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCC-CChHHHHHHHHHhCCCCCCEE
Confidence 57889999998765 5555566666542 389999987621 11122 3343322 123334445444444 89999
Q ss_pred EEcC-----Cc------------HHHHHHHHHHhhcCCcEEEEec
Q 020435 215 FECV-----GL------------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 215 ~d~~-----g~------------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
+... +. ...++.+.+.|+++ |.++..-
T Consensus 122 ~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~~ 165 (209)
T PRK11188 122 MSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVKV 165 (209)
T ss_pred ecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEE
Confidence 9532 21 12467888999998 9998853
No 472
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.34 E-value=0.2 Score=45.21 Aligned_cols=96 Identities=16% Similarity=0.071 Sum_probs=59.0
Q ss_pred CEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhc-CCcEEEcCCCCCCccHHHHHHHhc---CCCccEEEE
Q 020435 141 STVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRF-GVTEFVNSKNCGDKSVSQIIIDMT---DGGADYCFE 216 (326)
Q Consensus 141 ~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~-g~~~vi~~~~~~~~~~~~~i~~~~---~~g~d~v~d 216 (326)
.+|+|+|+|++|......+...|. +|+.++++++..+.+++- |. .+.+... ...+. +...+ .+.+|+||-
T Consensus 3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~--~~~~~--~~~~~~~~~~~~D~viv 76 (305)
T PRK05708 3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGL-TLVEQGQ--ASLYA--IPAETADAAEPIHRLLL 76 (305)
T ss_pred ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCe-EEeeCCc--ceeec--cCCCCcccccccCEEEE
Confidence 479999999999888877777888 899999988777777643 43 1221111 00000 00000 127899998
Q ss_pred cCCcHH---HHHHHHHHhhcCCcEEEEecc
Q 020435 217 CVGLAS---LVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 217 ~~g~~~---~~~~~~~~l~~~~G~~v~~g~ 243 (326)
|+=.-. .++.+...+.++ ..++.+.+
T Consensus 77 ~vK~~~~~~al~~l~~~l~~~-t~vv~lQN 105 (305)
T PRK05708 77 ACKAYDAEPAVASLAHRLAPG-AELLLLQN 105 (305)
T ss_pred ECCHHhHHHHHHHHHhhCCCC-CEEEEEeC
Confidence 776544 233444456666 66666654
No 473
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.34 E-value=0.28 Score=46.78 Aligned_cols=70 Identities=26% Similarity=0.364 Sum_probs=48.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCCh-hHH----HHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVIS-EKF----EIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 213 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~-~~~----~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~ 213 (326)
.+.+|+|+|+|.+|+.+++.+...|+ +|++++... +.. +.+.+.|.+ ++..+. . +.. .+++|+
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~---~---~~~----~~~~d~ 71 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY---P---EEF----LEGVDL 71 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc---c---hhH----hhcCCE
Confidence 46899999998899999999999999 999999764 222 334445654 332222 1 111 126999
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
|+.+.+.
T Consensus 72 vv~~~g~ 78 (450)
T PRK14106 72 VVVSPGV 78 (450)
T ss_pred EEECCCC
Confidence 9988885
No 474
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.33 E-value=0.4 Score=42.66 Aligned_cols=76 Identities=17% Similarity=0.260 Sum_probs=55.6
Q ss_pred CCCCEEEEEccCH-HHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEE
Q 020435 138 EVGSTVVIFGLGS-IGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFE 216 (326)
Q Consensus 138 ~~~~~vlI~Gag~-~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d 216 (326)
-.|.+|+|.|+|. +|..++.++...|+ +|++..+.. .++.+.+ ..+|++++
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t----------------------~~L~~~~-----~~aDIvI~ 208 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRT----------------------QNLPELV-----KQADIIVG 208 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCc----------------------hhHHHHh-----ccCCEEEE
Confidence 4688999999975 99999999999999 888776421 1222222 15899999
Q ss_pred cCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 217 CVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 217 ~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
++|.+..+. .+.++++ ..++.++..
T Consensus 209 AtG~~~~v~--~~~lk~g-avViDvg~n 233 (283)
T PRK14192 209 AVGKPELIK--KDWIKQG-AVVVDAGFH 233 (283)
T ss_pred ccCCCCcCC--HHHcCCC-CEEEEEEEe
Confidence 998776333 3558887 888888764
No 475
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.32 E-value=0.18 Score=40.98 Aligned_cols=43 Identities=23% Similarity=0.319 Sum_probs=37.1
Q ss_pred CCCEEEEEccC-HHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh
Q 020435 139 VGSTVVIFGLG-SIGLAVAEGARLCGATRIIGVDVISEKFEIGKR 182 (326)
Q Consensus 139 ~~~~vlI~Gag-~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~ 182 (326)
.|..|+++|+| +||...++-+...|+ .|+++.|.++.+..+-+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~ 49 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVK 49 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHh
Confidence 47789999984 899999999999999 99999999998876544
No 476
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=94.32 E-value=0.22 Score=44.64 Aligned_cols=95 Identities=14% Similarity=0.134 Sum_probs=57.8
Q ss_pred EEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCC-CccHHHHHHHhcCCCccEEEEcCCc
Q 020435 142 TVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCG-DKSVSQIIIDMTDGGADYCFECVGL 220 (326)
Q Consensus 142 ~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~-~~~~~~~i~~~~~~g~d~v~d~~g~ 220 (326)
+|+|+|+|.+|.+.+..+...|. +|+.+++++++.+.+++.|... +..+.. .........+. +.+|+||-|+..
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~--~~~d~vila~k~ 76 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--EDGEITVPVLAADDPAEL--GPQDLVILAVKA 76 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--cCCceeecccCCCChhHc--CCCCEEEEeccc
Confidence 68999999999988888888887 8999998888777776655421 100000 00000011111 379999988886
Q ss_pred HHHHHHHHHHh----hcCCcEEEEecc
Q 020435 221 ASLVQEAYACC----RKGWGKTIVLGV 243 (326)
Q Consensus 221 ~~~~~~~~~~l----~~~~G~~v~~g~ 243 (326)
.. ....+..+ .++ ..++.+..
T Consensus 77 ~~-~~~~~~~l~~~l~~~-~~iv~~~n 101 (304)
T PRK06522 77 YQ-LPAALPSLAPLLGPD-TPVLFLQN 101 (304)
T ss_pred cc-HHHHHHHHhhhcCCC-CEEEEecC
Confidence 55 44444444 344 45655543
No 477
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=94.32 E-value=0.23 Score=44.14 Aligned_cols=75 Identities=20% Similarity=0.187 Sum_probs=45.4
Q ss_pred EEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH-hc----C---CcEE-E-cCCCCCCccHHHHHHHhcCC-C
Q 020435 143 VVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK-RF----G---VTEF-V-NSKNCGDKSVSQIIIDMTDG-G 210 (326)
Q Consensus 143 vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~-~~----g---~~~v-i-~~~~~~~~~~~~~i~~~~~~-g 210 (326)
|||+|+ |.+|..+++.+...+..+++.+++++.++-.++ ++ . ..-. . -..+ -.-.+.+.+.... +
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigD---vrd~~~l~~~~~~~~ 77 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGD---VRDKERLNRIFEEYK 77 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTS---CCHHHHHHHHTT--T
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeec---ccCHHHHHHHHhhcC
Confidence 799987 999998888888777669999999998876653 23 1 1111 0 0111 2234566677666 9
Q ss_pred ccEEEEcCCc
Q 020435 211 ADYCFECVGL 220 (326)
Q Consensus 211 ~d~v~d~~g~ 220 (326)
+|+||.++.-
T Consensus 78 pdiVfHaAA~ 87 (293)
T PF02719_consen 78 PDIVFHAAAL 87 (293)
T ss_dssp -SEEEE----
T ss_pred CCEEEEChhc
Confidence 9999997764
No 478
>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]
Probab=94.31 E-value=0.34 Score=44.67 Aligned_cols=101 Identities=22% Similarity=0.341 Sum_probs=67.0
Q ss_pred hhcccCCCCEEEEE-cc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHH----hcCCcE--EEcCCCCCCccHHHHHH
Q 020435 133 RTANVEVGSTVVIF-GL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIII 204 (326)
Q Consensus 133 ~~~~~~~~~~vlI~-Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~i~ 204 (326)
...+.++|++||=. +| |+--..+++++...|. .|++.+.++.+...++ .+|... +++.+. ..+.+
T Consensus 150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~---~~~~~--- 222 (355)
T COG0144 150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDA---RRLAE--- 222 (355)
T ss_pred HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccc---ccccc---
Confidence 56788999999988 44 6666666666666676 7899999999987664 588764 444333 11111
Q ss_pred HhcCC-CccEEE-E--cCCc-------------------------HHHHHHHHHHhhcCCcEEEEe
Q 020435 205 DMTDG-GADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 205 ~~~~~-g~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 241 (326)
....+ .||.|+ | |.|. ..++..+++.++++ |.++-.
T Consensus 223 ~~~~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~G-G~LVYS 287 (355)
T COG0144 223 LLPGGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPG-GVLVYS 287 (355)
T ss_pred cccccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence 11122 499997 6 4443 23577889999997 877543
No 479
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=94.28 E-value=0.19 Score=41.25 Aligned_cols=92 Identities=13% Similarity=0.242 Sum_probs=60.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC--cEEEcCCCCCCccHHHHHHHhcCCCccEEEEc
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV--TEFVNSKNCGDKSVSQIIIDMTDGGADYCFEC 217 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~--~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~ 217 (326)
.+|.|+|| |-+|..+++=|+..|. .|++++|++++....+..-+ ..+++... +.+. + .|+|+||++
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~i~q~Difd~~~-----~a~~---l--~g~DaVIsA 69 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVTILQKDIFDLTS-----LASD---L--AGHDAVISA 69 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccceeecccccChhh-----hHhh---h--cCCceEEEe
Confidence 37889998 9999999999999998 99999999998866432210 11222111 1111 1 289999998
Q ss_pred CCcH---------HHHHHHHHHhhcC-CcEEEEecc
Q 020435 218 VGLA---------SLVQEAYACCRKG-WGKTIVLGV 243 (326)
Q Consensus 218 ~g~~---------~~~~~~~~~l~~~-~G~~v~~g~ 243 (326)
.+.. ...+.++..|+.- -.++..+|.
T Consensus 70 ~~~~~~~~~~~~~k~~~~li~~l~~agv~RllVVGG 105 (211)
T COG2910 70 FGAGASDNDELHSKSIEALIEALKGAGVPRLLVVGG 105 (211)
T ss_pred ccCCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcC
Confidence 8864 1133456666652 146777765
No 480
>PRK12746 short chain dehydrogenase; Provisional
Probab=94.26 E-value=0.36 Score=41.80 Aligned_cols=78 Identities=15% Similarity=0.178 Sum_probs=47.5
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHH-Hh---cCCc-EEE--cCCCCCCccHHHHHHHhc---
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG-KR---FGVT-EFV--NSKNCGDKSVSQIIIDMT--- 207 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~-~~~~~~~~~~-~~---~g~~-~vi--~~~~~~~~~~~~~i~~~~--- 207 (326)
+.+++|+|+ |.+|..+++.+...|. +|++. .++.++.+.+ .. .+.. +++ |..+ .+++.+.+++..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~ 82 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS--IDGVKKLVEQLKNEL 82 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC--HHHHHHHHHHHHHHh
Confidence 579999987 9999999998888898 77664 5666554332 22 2221 222 2222 223333333321
Q ss_pred ----C-CCccEEEEcCCc
Q 020435 208 ----D-GGADYCFECVGL 220 (326)
Q Consensus 208 ----~-~g~d~v~d~~g~ 220 (326)
+ +++|++|.++|.
T Consensus 83 ~~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGI 100 (254)
T ss_pred ccccCCCCccEEEECCCC
Confidence 1 269999998874
No 481
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=94.26 E-value=0.35 Score=42.19 Aligned_cols=79 Identities=23% Similarity=0.178 Sum_probs=48.3
Q ss_pred CCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCCh-hHHHH----HHhcCCc-EEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVIS-EKFEI----GKRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~-~~~~~----~~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
++.++||+|+ |.+|..+++.+...|+ +|+.+.++. +..+. ++..+.. ..+ |..+ ..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~--~~~i~~~~~~~~~~ 82 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV--ESDVVNLIQTAVKE 82 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHHH
Confidence 4789999987 9999999999999998 787777643 22222 2233432 122 3222 1222222333222
Q ss_pred -CCccEEEEcCCc
Q 020435 209 -GGADYCFECVGL 220 (326)
Q Consensus 209 -~g~d~v~d~~g~ 220 (326)
+++|+++++.+.
T Consensus 83 ~g~id~lv~~ag~ 95 (261)
T PRK08936 83 FGTLDVMINNAGI 95 (261)
T ss_pred cCCCCEEEECCCC
Confidence 379999998874
No 482
>TIGR00452 methyltransferase, putative. Known examples to date are restricted to the proteobacteria.
Probab=94.25 E-value=0.24 Score=44.78 Aligned_cols=99 Identities=13% Similarity=0.089 Sum_probs=61.6
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHH---HHhc-C---CcEEEcCCCCCCccHHHHH
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEI---GKRF-G---VTEFVNSKNCGDKSVSQII 203 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~---~~~~-g---~~~vi~~~~~~~~~~~~~i 203 (326)
+.......++++||-+|+|. |..+..+++. |+..|++++.++..... ++.+ + ..+++.. ++
T Consensus 113 ~l~~l~~~~g~~VLDvGCG~-G~~~~~~~~~-g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~~------~i---- 180 (314)
T TIGR00452 113 VLPHLSPLKGRTILDVGCGS-GYHMWRMLGH-GAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEPL------GI---- 180 (314)
T ss_pred HHHhcCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEEC------CH----
Confidence 33444566789999999876 6666666654 65579999988865543 2222 2 1122211 11
Q ss_pred HHhcCC-CccEEEEcC-----Cc-HHHHHHHHHHhhcCCcEEEEec
Q 020435 204 IDMTDG-GADYCFECV-----GL-ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 204 ~~~~~~-g~d~v~d~~-----g~-~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.++... .||+|+... .+ ...+..+.++|+++ |.+++..
T Consensus 181 e~lp~~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpG-G~Lvlet 225 (314)
T TIGR00452 181 EQLHELYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIK-GELVLET 225 (314)
T ss_pred HHCCCCCCcCEEEEcchhhccCCHHHHHHHHHHhcCCC-CEEEEEE
Confidence 122222 799998532 12 24588999999998 9998753
No 483
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.24 E-value=0.37 Score=41.28 Aligned_cols=77 Identities=18% Similarity=0.242 Sum_probs=46.2
Q ss_pred CCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChh-HHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhcC--
Q 020435 140 GSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISE-KFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD-- 208 (326)
Q Consensus 140 ~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~-~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~-- 208 (326)
..+|||+|+ |.+|..+++.+...|. +|+++.+..+ ..+.+ ...+.. +++ |..+ .+++.+.+.+...
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~v~~~~~~~~~~~ 82 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD--KAALEAAVAAAVERF 82 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCC--HHHHHHHHHHHHHHc
Confidence 468999987 9999999999998998 7777555443 22222 222322 222 2222 1233333333221
Q ss_pred CCccEEEEcCC
Q 020435 209 GGADYCFECVG 219 (326)
Q Consensus 209 ~g~d~v~d~~g 219 (326)
+++|.+|.+.+
T Consensus 83 ~~id~vi~~ag 93 (249)
T PRK12825 83 GRIDILVNNAG 93 (249)
T ss_pred CCCCEEEECCc
Confidence 37999999887
No 484
>PLN02256 arogenate dehydrogenase
Probab=94.24 E-value=0.88 Score=41.00 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=61.0
Q ss_pred hhhhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCC
Q 020435 131 AWRTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGG 210 (326)
Q Consensus 131 l~~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g 210 (326)
+.+...-..+.+|.|+|.|.+|...+..++..|. +|+++++++. .+.++++|+.. . .+..+.+ ...
T Consensus 27 ~~~~~~~~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~-~-------~~~~e~~----~~~ 92 (304)
T PLN02256 27 LQEELEKSRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF-F-------RDPDDFC----EEH 92 (304)
T ss_pred HhHhhccCCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee-e-------CCHHHHh----hCC
Confidence 3444555567799999999999999998888887 8999988764 35555666531 1 1222211 125
Q ss_pred ccEEEEcCCcHHHHHHHHHH-----hhcCCcEEEEecc
Q 020435 211 ADYCFECVGLASLVQEAYAC-----CRKGWGKTIVLGV 243 (326)
Q Consensus 211 ~d~v~d~~g~~~~~~~~~~~-----l~~~~G~~v~~g~ 243 (326)
+|+||-|+.... ....+.- ++++ ..++.++.
T Consensus 93 aDvVilavp~~~-~~~vl~~l~~~~l~~~-~iviDv~S 128 (304)
T PLN02256 93 PDVVLLCTSILS-TEAVLRSLPLQRLKRS-TLFVDVLS 128 (304)
T ss_pred CCEEEEecCHHH-HHHHHHhhhhhccCCC-CEEEecCC
Confidence 788888877554 3333332 4455 55555544
No 485
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=94.22 E-value=0.53 Score=42.96 Aligned_cols=86 Identities=27% Similarity=0.194 Sum_probs=57.6
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECV 218 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~ 218 (326)
.|.+|.|+|.|.+|..+++.++..|. +|++.+++++..... . ... .++.+.+. ..|+|+-+.
T Consensus 145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~----~~l~ell~-----~aDiVil~l 206 (330)
T PRK12480 145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYK----DSVKEAIK-----DADIISLHV 206 (330)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hcc----CCHHHHHh-----cCCEEEEeC
Confidence 46799999999999999999999999 999999876543211 0 011 12222222 478888776
Q ss_pred CcHH-----HHHHHHHHhhcCCcEEEEecc
Q 020435 219 GLAS-----LVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 219 g~~~-----~~~~~~~~l~~~~G~~v~~g~ 243 (326)
.... .....+..++++ ..+|.++.
T Consensus 207 P~t~~t~~li~~~~l~~mk~g-avlIN~aR 235 (330)
T PRK12480 207 PANKESYHLFDKAMFDHVKKG-AILVNAAR 235 (330)
T ss_pred CCcHHHHHHHhHHHHhcCCCC-cEEEEcCC
Confidence 6432 233556677886 77776654
No 486
>PLN02490 MPBQ/MSBQ methyltransferase
Probab=94.22 E-value=0.33 Score=44.33 Aligned_cols=96 Identities=18% Similarity=0.232 Sum_probs=62.2
Q ss_pred CCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCC-c--EEEcCCCCCCccHHHHHHHhcCCCccEE
Q 020435 138 EVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGV-T--EFVNSKNCGDKSVSQIIIDMTDGGADYC 214 (326)
Q Consensus 138 ~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~-~--~vi~~~~~~~~~~~~~i~~~~~~g~d~v 214 (326)
.++.+||-+|+|. |..+..+++..+..+|++++.+++..+.+++... . .++. .+..+ + ....+.+|+|
T Consensus 112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~------gD~e~-l-p~~~~sFDvV 182 (340)
T PLN02490 112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE------GDAED-L-PFPTDYADRY 182 (340)
T ss_pred CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe------ccHHh-C-CCCCCceeEE
Confidence 4678999998866 6666777777643489999999888777765321 1 1211 12111 0 1112379998
Q ss_pred EEcCC------cHHHHHHHHHHhhcCCcEEEEecc
Q 020435 215 FECVG------LASLVQEAYACCRKGWGKTIVLGV 243 (326)
Q Consensus 215 ~d~~g------~~~~~~~~~~~l~~~~G~~v~~g~ 243 (326)
+.+.. ....++++.+.|+++ |++++.+.
T Consensus 183 Is~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~ 216 (340)
T PLN02490 183 VSAGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP 216 (340)
T ss_pred EEcChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence 85321 234578999999998 99988754
No 487
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.18 E-value=0.32 Score=42.50 Aligned_cols=79 Identities=20% Similarity=0.291 Sum_probs=48.5
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCCh--hHHHHH-HhcCCc-EEE--cCCCCCCccHHHHHHHhcC-
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVIS--EKFEIG-KRFGVT-EFV--NSKNCGDKSVSQIIIDMTD- 208 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~--~~~~~~-~~~g~~-~vi--~~~~~~~~~~~~~i~~~~~- 208 (326)
.+.+++|+|+ +++|.++++.+...|+ +|+.++++. +..+.+ .+++.. +.+ |..+ .++..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~--~~~i~~~~~~~~~~ 82 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN--EEHLASLADRVREH 82 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC--HHHHHHHHHHHHHH
Confidence 4679999985 6999999998888999 899988654 333333 334321 122 2222 1223333333222
Q ss_pred -CCccEEEEcCCc
Q 020435 209 -GGADYCFECVGL 220 (326)
Q Consensus 209 -~g~d~v~d~~g~ 220 (326)
+++|++++++|.
T Consensus 83 ~g~iD~li~nAG~ 95 (256)
T PRK07889 83 VDGLDGVVHSIGF 95 (256)
T ss_pred cCCCcEEEEcccc
Confidence 389999998764
No 488
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.18 E-value=0.41 Score=42.95 Aligned_cols=59 Identities=20% Similarity=0.208 Sum_probs=48.1
Q ss_pred hhcccCCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcC---ChhHHHHHHhcCCcEEEcCC
Q 020435 133 RTANVEVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDV---ISEKFEIGKRFGVTEFVNSK 192 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~---~~~~~~~~~~~g~~~vi~~~ 192 (326)
....+.+|.++||-.. |++|..++.++...|. +++++.. +.|+...++.+|++.+....
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gy-k~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~ 158 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGY-KCIITMPEKMSKEKRILLRALGAEIILTPP 158 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCc-eEEEEechhhhHHHHHHHHHcCCEEEecCh
Confidence 3456889999999985 9999999999999999 8888875 55777788999987665433
No 489
>PRK10901 16S rRNA methyltransferase B; Provisional
Probab=94.17 E-value=0.63 Score=44.10 Aligned_cols=101 Identities=14% Similarity=0.254 Sum_probs=62.4
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh----cCCc-EEEcCCCCCCccHHHHHHHhc
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR----FGVT-EFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~----~g~~-~vi~~~~~~~~~~~~~i~~~~ 207 (326)
....++++++||=.|+|+ |.....+++..+..+|++++.++++.+.+++ +|.. .++..+. .+. ....
T Consensus 238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~---~~~----~~~~ 309 (427)
T PRK10901 238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDA---RDP----AQWW 309 (427)
T ss_pred HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCc---ccc----hhhc
Confidence 445678899999998654 4444556655432389999999998777643 4532 3333322 111 1112
Q ss_pred CC-CccEEE-E--cCCc-------------------------HHHHHHHHHHhhcCCcEEEEec
Q 020435 208 DG-GADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVLG 242 (326)
Q Consensus 208 ~~-g~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~g 242 (326)
.. .+|.|+ | |.+. ...+..+++.|+++ |+++..-
T Consensus 310 ~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst 372 (427)
T PRK10901 310 DGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT 372 (427)
T ss_pred ccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence 23 799998 4 3331 13477888899998 9987543
No 490
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=94.17 E-value=0.59 Score=36.89 Aligned_cols=82 Identities=17% Similarity=0.152 Sum_probs=58.5
Q ss_pred hhhccc-CCCCEEEEEcc-CHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCC
Q 020435 132 WRTANV-EVGSTVVIFGL-GSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDG 209 (326)
Q Consensus 132 ~~~~~~-~~~~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~ 209 (326)
.+.-++ -.|.+|+|+|. ..+|.-++.++...|+ .|+...+... ++.+.++
T Consensus 19 l~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~----------------------~l~~~v~----- 70 (140)
T cd05212 19 LNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI----------------------QLQSKVH----- 70 (140)
T ss_pred HHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc----------------------CHHHHHh-----
Confidence 344343 36999999996 7999999999999998 8888874321 2222222
Q ss_pred CccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 210 GADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 210 g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.+|+|+.+.|.+..++. +.++++ ..++.+|..
T Consensus 71 ~ADIVvsAtg~~~~i~~--~~ikpG-a~Vidvg~~ 102 (140)
T cd05212 71 DADVVVVGSPKPEKVPT--EWIKPG-ATVINCSPT 102 (140)
T ss_pred hCCEEEEecCCCCccCH--HHcCCC-CEEEEcCCC
Confidence 48999999998875554 459997 888877654
No 491
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=94.15 E-value=0.8 Score=35.27 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=48.5
Q ss_pred EEEEEcc-CHHHHHHHHHHHH-cCCCEEEE-EcCChhH---HH--HHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccE
Q 020435 142 TVVIFGL-GSIGLAVAEGARL-CGATRIIG-VDVISEK---FE--IGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 213 (326)
Q Consensus 142 ~vlI~Ga-g~~G~~a~~la~~-~g~~~V~~-~~~~~~~---~~--~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~ 213 (326)
+|.|+|+ |.+|..+++.+.. .+. ++++ +++.++. .+ .+...+...+..+ .+ +.+... .+|+
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~~~~~-~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~-----~~----l~~~~~-~~DV 70 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILESPGF-ELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT-----DD----LEELLE-EADV 70 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTE-EEEEEEETTTSTTTTSBCHHHCTSST-SSBEB-----S-----HHHHTT-H-SE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCc-EEEEEEecCCcccccchhhhhhCcCCcccccc-----hh----HHHhcc-cCCE
Confidence 6899998 9999999999988 677 5444 4444311 11 1111111111111 12 223333 3899
Q ss_pred EEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 214 CFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 214 v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
++|+..... ....++.+... |.-+.+|.+
T Consensus 71 vIDfT~p~~-~~~~~~~~~~~-g~~~ViGTT 99 (124)
T PF01113_consen 71 VIDFTNPDA-VYDNLEYALKH-GVPLVIGTT 99 (124)
T ss_dssp EEEES-HHH-HHHHHHHHHHH-T-EEEEE-S
T ss_pred EEEcCChHH-hHHHHHHHHhC-CCCEEEECC
Confidence 999995444 55555555554 677777764
No 492
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=94.15 E-value=0.77 Score=41.35 Aligned_cols=37 Identities=24% Similarity=0.355 Sum_probs=30.3
Q ss_pred CCCEEEEEcc---CHHHHHHHHHHHHcCCCEEEEEcCChhHH
Q 020435 139 VGSTVVIFGL---GSIGLAVAEGARLCGATRIIGVDVISEKF 177 (326)
Q Consensus 139 ~~~~vlI~Ga---g~~G~~a~~la~~~g~~~V~~~~~~~~~~ 177 (326)
.|.++||+|+ .+||.++++.+...|+ +|+. .+..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga-~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGA-EILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCC-EEEE-EeCcchh
Confidence 5889999987 7999999999999999 8887 4444443
No 493
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=94.14 E-value=0.23 Score=43.99 Aligned_cols=70 Identities=20% Similarity=0.092 Sum_probs=50.1
Q ss_pred ccCCCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHh-cCCcEEEcCCCCCCccHHHHHHHhcCCCccEE
Q 020435 136 NVEVGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKR-FGVTEFVNSKNCGDKSVSQIIIDMTDGGADYC 214 (326)
Q Consensus 136 ~~~~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~-~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v 214 (326)
+...+.+++|.|+|+.+.+++..++..|+.+|+++.|++++.+.+.+ ++.+ +.+.+ ....+|+|
T Consensus 118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~------------~~~~~---~~~~~dlv 182 (272)
T PRK12550 118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE------------WRPDL---GGIEADIL 182 (272)
T ss_pred CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc------------chhhc---ccccCCEE
Confidence 34455689999999999999999999998789999999988776543 4311 00011 01268999
Q ss_pred EEcCCc
Q 020435 215 FECVGL 220 (326)
Q Consensus 215 ~d~~g~ 220 (326)
++|...
T Consensus 183 INaTp~ 188 (272)
T PRK12550 183 VNVTPI 188 (272)
T ss_pred EECCcc
Confidence 998763
No 494
>PRK08223 hypothetical protein; Validated
Probab=94.10 E-value=0.87 Score=40.47 Aligned_cols=35 Identities=26% Similarity=0.188 Sum_probs=30.9
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|.|+|++|..+++.+.+.|.+++..++.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 36799999999999999999999999888888854
No 495
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.08 E-value=0.54 Score=42.03 Aligned_cols=82 Identities=18% Similarity=0.263 Sum_probs=60.1
Q ss_pred hhhhccc-CCCCEEEEEc-cCHHHHHHHHHHHHcCCCEEEEEc-CChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhc
Q 020435 131 AWRTANV-EVGSTVVIFG-LGSIGLAVAEGARLCGATRIIGVD-VISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMT 207 (326)
Q Consensus 131 l~~~~~~-~~~~~vlI~G-ag~~G~~a~~la~~~g~~~V~~~~-~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~ 207 (326)
+++.-++ -.|.+|+|+| .+.+|.-++.++...|+ .|++.. +++ ++.+.++
T Consensus 148 ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~-tVtv~~~rT~-----------------------~l~e~~~--- 200 (296)
T PRK14188 148 LLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANA-TVTIAHSRTR-----------------------DLPAVCR--- 200 (296)
T ss_pred HHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCC-EEEEECCCCC-----------------------CHHHHHh---
Confidence 3444443 3699999999 59999999999999998 888874 332 1111111
Q ss_pred CCCccEEEEcCCcHHHHHHHHHHhhcCCcEEEEeccC
Q 020435 208 DGGADYCFECVGLASLVQEAYACCRKGWGKTIVLGVD 244 (326)
Q Consensus 208 ~~g~d~v~d~~g~~~~~~~~~~~l~~~~G~~v~~g~~ 244 (326)
.+|+|+-|++.+..+...+ ++++ ..+|.+|..
T Consensus 201 --~ADIVIsavg~~~~v~~~~--lk~G-avVIDvGin 232 (296)
T PRK14188 201 --RADILVAAVGRPEMVKGDW--IKPG-ATVIDVGIN 232 (296)
T ss_pred --cCCEEEEecCChhhcchhe--ecCC-CEEEEcCCc
Confidence 4899999999988666555 8997 889999864
No 496
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=94.08 E-value=0.46 Score=47.15 Aligned_cols=94 Identities=10% Similarity=0.084 Sum_probs=66.1
Q ss_pred CCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChhHHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccEEEEcCC
Q 020435 140 GSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISEKFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADYCFECVG 219 (326)
Q Consensus 140 ~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~v~d~~g 219 (326)
.+.|+|.|.|.+|+.+++.++..|. ++++++.++++.+.+++.|...+. .+. .-.+.+++.--+.+|.++-+.+
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa----t~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA----TQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC----CCHHHHHhcCCccCCEEEEEeC
Confidence 3689999999999999999999998 899999999999999998864333 222 1122333332238999999999
Q ss_pred cHHHHHHH---HHHhhcCCcEEEE
Q 020435 220 LASLVQEA---YACCRKGWGKTIV 240 (326)
Q Consensus 220 ~~~~~~~~---~~~l~~~~G~~v~ 240 (326)
+...-... .+...|+ -+++.
T Consensus 474 d~~~n~~i~~~~r~~~p~-~~Iia 496 (601)
T PRK03659 474 EPEDTMKIVELCQQHFPH-LHILA 496 (601)
T ss_pred CHHHHHHHHHHHHHHCCC-CeEEE
Confidence 86633333 3444454 45544
No 497
>PRK14902 16S rRNA methyltransferase B; Provisional
Probab=94.07 E-value=0.41 Score=45.59 Aligned_cols=100 Identities=19% Similarity=0.308 Sum_probs=60.9
Q ss_pred hhcccCCCCEEEEEccCHHHHHHHHHHHHc-CCCEEEEEcCChhHHHHHH----hcCCcE--EEcCCCCCCccHHHHHHH
Q 020435 133 RTANVEVGSTVVIFGLGSIGLAVAEGARLC-GATRIIGVDVISEKFEIGK----RFGVTE--FVNSKNCGDKSVSQIIID 205 (326)
Q Consensus 133 ~~~~~~~~~~vlI~Gag~~G~~a~~la~~~-g~~~V~~~~~~~~~~~~~~----~~g~~~--vi~~~~~~~~~~~~~i~~ 205 (326)
....++++++||=.|+|+ |...+.+++.. +..+|++++.++++.+.++ ..|.+. ++..+. .++.+ .
T Consensus 244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~D~---~~~~~---~ 316 (444)
T PRK14902 244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKALDA---RKVHE---K 316 (444)
T ss_pred HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCCc---ccccc---h
Confidence 345677899999887654 44444555554 2238999999999877664 356543 222221 11111 1
Q ss_pred hcCCCccEEE-E--cCCc-------------------------HHHHHHHHHHhhcCCcEEEEe
Q 020435 206 MTDGGADYCF-E--CVGL-------------------------ASLVQEAYACCRKGWGKTIVL 241 (326)
Q Consensus 206 ~~~~g~d~v~-d--~~g~-------------------------~~~~~~~~~~l~~~~G~~v~~ 241 (326)
+ .+.+|.|+ | |.|. ...+..+++.|+++ |+++..
T Consensus 317 ~-~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvys 378 (444)
T PRK14902 317 F-AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYS 378 (444)
T ss_pred h-cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence 1 13799997 5 3332 12467788999998 998743
No 498
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.05 E-value=0.37 Score=41.40 Aligned_cols=77 Identities=13% Similarity=0.061 Sum_probs=47.3
Q ss_pred CEEEEEcc-CHHHHHHHHHHHHcCCCEEEEE-cCChhHHHHH----HhcCCc-EEE--cCCCCCCccHHHHHHHhc--CC
Q 020435 141 STVVIFGL-GSIGLAVAEGARLCGATRIIGV-DVISEKFEIG----KRFGVT-EFV--NSKNCGDKSVSQIIIDMT--DG 209 (326)
Q Consensus 141 ~~vlI~Ga-g~~G~~a~~la~~~g~~~V~~~-~~~~~~~~~~----~~~g~~-~vi--~~~~~~~~~~~~~i~~~~--~~ 209 (326)
.++||+|+ |.+|..+++.+...|+ +|+++ .+++++.+.. +..+.. +++ |..+ .+.+.+.+.+.. .+
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d--~~~i~~~~~~~~~~~~ 78 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD--ENQVVAMFTAIDQHDE 78 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC--HHHHHHHHHHHHHhCC
Confidence 37899987 9999999999988898 77764 5555544322 223322 222 2222 223333344332 23
Q ss_pred CccEEEEcCCc
Q 020435 210 GADYCFECVGL 220 (326)
Q Consensus 210 g~d~v~d~~g~ 220 (326)
++|+++.+.+.
T Consensus 79 ~id~vi~~ag~ 89 (247)
T PRK09730 79 PLAALVNNAGI 89 (247)
T ss_pred CCCEEEECCCC
Confidence 89999998884
No 499
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.05 E-value=0.35 Score=46.54 Aligned_cols=69 Identities=28% Similarity=0.291 Sum_probs=48.0
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCChh-----HHHHHHhcCCcEEEcCCCCCCccHHHHHHHhcCCCccE
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVISE-----KFEIGKRFGVTEFVNSKNCGDKSVSQIIIDMTDGGADY 213 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~~~-----~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~g~d~ 213 (326)
.+.+|+|+|+|.+|+.++.+++..|. +|++++..+. ..+.+++.|++....... . ...++|+
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~---------~~~~~D~ 81 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T---------LPEDTDL 81 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c---------ccCCCCE
Confidence 46799999999999999999999999 8999885542 123456677654433222 1 0115788
Q ss_pred EEEcCCc
Q 020435 214 CFECVGL 220 (326)
Q Consensus 214 v~d~~g~ 220 (326)
|+-+.|-
T Consensus 82 Vv~s~Gi 88 (480)
T PRK01438 82 VVTSPGW 88 (480)
T ss_pred EEECCCc
Confidence 8877765
No 500
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=94.02 E-value=0.47 Score=44.02 Aligned_cols=35 Identities=20% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCCEEEEEccCHHHHHHHHHHHHcCCCEEEEEcCC
Q 020435 139 VGSTVVIFGLGSIGLAVAEGARLCGATRIIGVDVI 173 (326)
Q Consensus 139 ~~~~vlI~Gag~~G~~a~~la~~~g~~~V~~~~~~ 173 (326)
...+|+|+|+|++|..+++.+...|.++++.++.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 36699999999999999999999998889888865
Done!