Query 020439
Match_columns 326
No_of_seqs 224 out of 1483
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 02:59:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020439.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020439hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xmb_A IAA-amino acid hydrolas 100.0 2.9E-51 1E-55 389.1 30.0 289 35-325 13-301 (418)
2 1ysj_A Protein YXEP; M20 famil 100.0 1.2E-49 4.1E-54 376.4 33.5 278 48-325 30-309 (404)
3 3io1_A Aminobenzoyl-glutamate 100.0 4.1E-49 1.4E-53 377.0 30.6 282 38-325 4-333 (445)
4 3pfo_A Putative acetylornithin 100.0 1.1E-46 3.7E-51 359.2 28.9 283 31-325 9-337 (433)
5 1cg2_A Carboxypeptidase G2; me 100.0 8.1E-45 2.8E-49 342.1 25.1 278 33-325 4-296 (393)
6 3ram_A HMRA protein; two-domai 100.0 2.1E-44 7.1E-49 339.3 27.7 264 36-325 4-274 (394)
7 3dlj_A Beta-Ala-His dipeptidas 100.0 4.9E-43 1.7E-47 338.5 30.6 280 33-320 10-380 (485)
8 3tx8_A Succinyl-diaminopimelat 100.0 6.2E-44 2.1E-48 333.3 23.5 263 50-325 13-286 (369)
9 1vgy_A Succinyl-diaminopimelat 100.0 4.8E-43 1.6E-47 330.1 28.7 261 50-314 6-281 (393)
10 3ct9_A Acetylornithine deacety 100.0 4.4E-43 1.5E-47 326.1 25.7 248 50-314 11-270 (356)
11 3isz_A Succinyl-diaminopimelat 100.0 2.5E-42 8.4E-47 323.0 29.8 261 50-314 3-278 (377)
12 3rza_A Tripeptidase; phosphory 100.0 1.4E-42 4.9E-47 327.1 27.1 270 38-325 14-302 (396)
13 2pok_A Peptidase, M20/M25/M40 100.0 8.5E-42 2.9E-46 329.6 29.0 284 35-325 30-388 (481)
14 3gb0_A Peptidase T; NP_980509. 100.0 1.4E-41 4.9E-46 317.8 26.9 259 50-325 6-282 (373)
15 2zog_A Cytosolic non-specific 100.0 2.2E-41 7.4E-46 326.6 28.9 276 36-319 8-372 (479)
16 3pfe_A Succinyl-diaminopimelat 100.0 2E-41 6.9E-46 326.1 24.9 281 37-325 6-371 (472)
17 2rb7_A Peptidase, M20/M25/M40 100.0 2.5E-41 8.6E-46 315.2 22.4 246 50-313 6-271 (364)
18 2f7v_A Aectylcitrulline deacet 100.0 4.8E-41 1.6E-45 313.9 22.1 248 42-315 3-272 (369)
19 3ife_A Peptidase T; metallopep 100.0 2.3E-39 7.9E-44 308.7 26.6 259 49-325 26-341 (434)
20 3khx_A Putative dipeptidase sa 100.0 3.7E-39 1.3E-43 311.6 25.3 270 37-325 23-400 (492)
21 1fno_A Peptidase T; metallo pe 100.0 1.7E-38 5.6E-43 301.3 25.0 252 50-320 2-306 (417)
22 1z2l_A Allantoate amidohydrola 100.0 7.1E-37 2.4E-41 290.6 26.4 261 42-325 3-321 (423)
23 3mru_A Aminoacyl-histidine dip 100.0 1E-36 3.5E-41 294.3 25.4 252 50-321 14-300 (490)
24 3n5f_A L-carbamoylase, N-carba 100.0 9.1E-36 3.1E-40 281.7 30.1 254 50-325 5-317 (408)
25 2v8h_A Beta-alanine synthase; 100.0 9.3E-37 3.2E-41 293.7 23.2 255 50-325 32-355 (474)
26 1lfw_A PEPV; hydrolase, dipept 100.0 9.2E-36 3.1E-40 286.6 29.2 269 39-325 5-376 (470)
27 2qyv_A XAA-His dipeptidase; YP 100.0 7.5E-36 2.5E-40 288.5 28.0 244 50-311 11-329 (487)
28 1q7l_A Aminoacylase-1; catalys 100.0 2.1E-28 7.3E-33 208.7 14.3 170 50-224 10-198 (198)
29 4h2k_A Succinyl-diaminopimelat 99.9 1.4E-26 4.6E-31 206.8 18.4 149 49-198 5-166 (269)
30 3t68_A Succinyl-diaminopimelat 99.9 2.9E-26 1E-30 204.6 15.1 148 50-198 6-166 (268)
31 2fvg_A Endoglucanase; TM1049, 99.8 7.3E-21 2.5E-25 175.3 9.6 161 55-244 3-245 (340)
32 2gre_A Deblocking aminopeptida 99.8 2.8E-19 9.7E-24 165.2 13.1 140 50-198 6-241 (349)
33 1vhe_A Aminopeptidase/glucanas 99.8 2.7E-18 9.1E-23 160.1 15.8 144 50-199 7-240 (373)
34 1tkj_A Aminopeptidase, SGAP; d 99.8 1.3E-18 4.4E-23 156.3 12.7 131 50-197 7-159 (284)
35 2wyr_A Cobalt-activated peptid 99.8 2.3E-18 7.7E-23 158.1 13.4 137 52-199 4-229 (332)
36 1rtq_A Bacterial leucyl aminop 99.8 6.1E-18 2.1E-22 152.9 14.3 127 50-185 20-164 (299)
37 2wzn_A TET3, 354AA long hypoth 99.7 5.2E-21 1.8E-25 174.2 -13.8 186 53-254 12-201 (354)
38 1y0y_A FRV operon protein FRVX 99.7 7.3E-17 2.5E-21 149.2 13.8 136 52-199 8-236 (353)
39 3tc8_A Leucine aminopeptidase; 99.7 2.8E-16 9.7E-21 142.3 16.5 131 50-186 25-186 (309)
40 3gux_A Putative Zn-dependent e 99.7 6.2E-16 2.1E-20 140.1 14.9 131 50-186 27-189 (314)
41 1vho_A Endoglucanase; structur 99.7 9.1E-16 3.1E-20 141.5 13.8 141 50-199 5-228 (346)
42 1ylo_A Hypothetical protein SF 99.6 3.2E-15 1.1E-19 137.9 15.0 140 54-199 7-225 (348)
43 2afw_A Glutaminyl-peptide cycl 99.6 4.9E-15 1.7E-19 135.6 13.3 126 50-185 31-190 (329)
44 3cpx_A Aminopeptidase, M42 fam 99.6 1.6E-15 5.5E-20 138.3 7.3 139 48-198 15-218 (321)
45 3kl9_A PEPA, glutamyl aminopep 99.5 3.2E-13 1.1E-17 124.3 15.2 144 50-199 3-238 (355)
46 4fuu_A Leucine aminopeptidase; 99.4 1.1E-11 3.7E-16 112.4 17.2 131 50-186 25-187 (309)
47 2vpu_A TET3, 354AA long hypoth 99.4 1.8E-12 6.2E-17 119.2 11.4 65 51-117 10-75 (354)
48 3pb6_X Glutaminyl-peptide cycl 99.3 6.7E-12 2.3E-16 114.2 12.3 124 50-185 39-194 (330)
49 4f9u_A CG32412; alpha/beta hyd 99.3 1.9E-11 6.7E-16 110.8 15.2 123 50-185 11-163 (312)
50 4fai_A CG5976, isoform B; alph 99.3 7.4E-11 2.5E-15 107.7 17.2 146 37-197 26-203 (330)
51 3isx_A Endoglucanase; TM1050, 99.3 8.7E-12 3E-16 114.0 10.8 66 50-117 11-76 (343)
52 2ek8_A Aminopeptidase; metallo 98.8 1E-08 3.4E-13 96.8 10.5 97 70-185 171-285 (421)
53 3iib_A Peptidase M28; YP_92679 98.8 1.1E-08 3.6E-13 97.1 10.5 114 70-200 203-331 (444)
54 3kas_A Transferrin receptor pr 98.3 2.8E-06 9.4E-11 83.6 10.4 78 93-186 266-350 (640)
55 3fed_A Glutamate carboxypeptid 98.3 2E-06 6.7E-11 85.5 8.8 77 93-185 312-394 (707)
56 3k9t_A Putative peptidase; str 94.4 0.33 1.1E-05 44.7 11.0 70 95-186 167-238 (435)
57 2hc9_A Leucine aminopeptidase 87.6 10 0.00036 35.5 13.4 112 49-174 166-307 (491)
58 1gyt_A Cytosol aminopeptidase; 86.6 8.6 0.0003 36.3 12.4 113 48-174 179-325 (503)
59 3jru_B Probable cytosol aminop 86.1 9.7 0.00033 35.8 12.3 113 48-174 174-317 (490)
60 3h8g_F Cytosol aminopeptidase; 85.6 10 0.00035 35.7 12.3 113 48-174 178-322 (497)
61 1lam_A Leucine aminopeptidase; 84.7 2.8 9.4E-05 39.5 8.0 120 48-174 159-305 (484)
62 3ij3_A Cytosol aminopeptidase; 84.3 11 0.00038 35.2 11.7 119 49-174 166-305 (482)
63 3pei_A Cytosol aminopeptidase; 83.9 11 0.00036 35.5 11.5 113 48-174 162-306 (486)
64 3kzw_A Cytosol aminopeptidase; 83.6 11 0.00036 35.7 11.4 118 48-174 195-338 (515)
65 3mru_A Aminoacyl-histidine dip 83.1 3 0.0001 39.4 7.7 50 266-325 347-396 (490)
66 2ijz_A Probable M18-family ami 82.9 0.36 1.2E-05 45.0 1.2 59 59-117 8-85 (428)
67 4efd_A Aminopeptidase; structu 82.8 14 0.00049 34.7 11.8 111 50-174 204-345 (522)
68 1y7e_A Probable M18-family ami 81.9 0.6 2E-05 43.9 2.3 47 69-117 35-99 (458)
69 3kr4_A M17 leucyl aminopeptida 81.8 24 0.00083 33.3 13.0 118 48-174 203-349 (528)
70 2glf_A Probable M18-family ami 81.6 3.2 0.00011 38.8 7.1 50 68-117 32-96 (450)
71 3fed_A Glutamate carboxypeptid 71.4 8 0.00027 38.3 7.0 53 33-89 12-67 (707)
72 2glj_A Probable M18-family ami 64.4 1.4 4.9E-05 41.3 0.1 47 70-117 38-105 (461)
73 2ek8_A Aminopeptidase; metallo 62.5 8.3 0.00028 35.5 4.9 48 38-89 8-57 (421)
74 3utk_A Lipoprotein OUTS; neste 58.3 14 0.00048 28.1 4.6 81 3-88 5-88 (133)
75 1y7e_A Probable M18-family ami 56.7 3.3 0.00011 38.8 1.1 45 133-180 247-294 (458)
76 2glj_A Probable M18-family ami 55.5 6.4 0.00022 36.9 2.9 44 133-180 253-299 (461)
77 2jvf_A De novo protein M7; tet 48.3 20 0.00069 23.9 3.5 32 285-316 15-46 (96)
78 3iib_A Peptidase M28; YP_92679 45.7 21 0.0007 33.1 4.6 40 50-89 21-65 (444)
79 2glf_A Probable M18-family ami 43.8 18 0.00061 33.7 3.8 42 133-179 241-285 (450)
80 2ijz_A Probable M18-family ami 32.4 9.9 0.00034 35.2 0.1 46 132-182 226-274 (428)
81 3kas_A Transferrin receptor pr 31.8 24 0.00082 34.5 2.8 49 35-87 7-60 (640)
82 1kaf_A Transcription regulator 28.7 81 0.0028 22.8 4.4 34 68-101 6-40 (108)
83 5nul_A Flavodoxin; electron tr 26.9 46 0.0016 24.6 3.2 28 62-89 5-32 (138)
84 2qyv_A XAA-His dipeptidase; YP 26.4 1.4E+02 0.0047 27.6 7.0 52 264-325 343-394 (487)
85 1j27_A Hypothetical protein TT 25.7 1.4E+02 0.0048 21.4 5.3 36 287-323 6-41 (102)
86 3iar_A Adenosine deaminase; pu 24.8 84 0.0029 28.2 4.9 29 298-326 120-148 (367)
87 3vat_A Dnpep, aspartyl aminope 23.4 53 0.0018 30.9 3.3 49 131-180 275-330 (496)
88 2fz5_A Flavodoxin; alpha/beta 22.7 67 0.0023 23.4 3.3 28 62-89 6-33 (137)
89 3hly_A Flavodoxin-like domain; 20.6 87 0.003 24.0 3.7 28 62-89 7-34 (161)
No 1
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=2.9e-51 Score=389.08 Aligned_cols=289 Identities=67% Similarity=1.098 Sum_probs=237.1
Q ss_pred ccHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeec
Q 020439 35 IPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADM 114 (326)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~ 114 (326)
..+++.+++++++.++++++++++|++|||+|++|.++++||.++|+++|++++....++|++++++++++|+|+|++||
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~ 92 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM 92 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence 34456777777432389999999999999999999999999999999999999876557899999965422899999999
Q ss_pred CcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCcccHHHHHHccCCccccEE
Q 020439 115 DALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAI 194 (326)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~l~~~g~~~~~d~~ 194 (326)
||||.++...|+|...+||++||||+|++++++|+|++.|++.+.+++++|.|+|++|||++.|++++++++.++++|++
T Consensus 93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~ 172 (418)
T 1xmb_A 93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI 172 (418)
T ss_dssp CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence 99999887788888878999999999999999999999999987778999999999999977899999999877678999
Q ss_pred EEecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEE
Q 020439 195 FGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKF 274 (326)
Q Consensus 195 i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i 274 (326)
+++|.++++|+|.+.+..+.+++|..+++|+++|+++|+|.|+.|+|||..+++++..|+.+..+..++...++++++.|
T Consensus 173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i 252 (418)
T 1xmb_A 173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV 252 (418)
T ss_dssp EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEE
T ss_pred EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEE
Confidence 99887776778876666677789999999999999999999999999999999999999877544334445679999999
Q ss_pred EcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 275 EGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 275 ~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
+||...|+||++|++.+|+|+.| +.+++.++|++++++.+..+++++++
T Consensus 253 ~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~ 301 (418)
T 1xmb_A 253 NGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASV 301 (418)
T ss_dssp C--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred EecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 99999999999999999999999 99999999999999999888887664
No 2
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=1.2e-49 Score=376.38 Aligned_cols=278 Identities=42% Similarity=0.688 Sum_probs=231.0
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeec-ccCceEEEEECCC-CCcEEEEEeecCcccCcCCCCC
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-VAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEW 125 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-~~~~nvia~~~~~-~~~~I~l~~H~DtVp~~~~~~w 125 (326)
+.+++++++++|++|||+|++|.++++||.++|+++|++++.+ .+++|++++++++ ++|+|+|+|||||||.++....
T Consensus 30 ~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~~~ 109 (404)
T 1ysj_A 30 FHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQTNL 109 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCCCC
T ss_pred HHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCCCC
Confidence 3488999999999999999999999999999999999998654 3467999999553 4589999999999998865455
Q ss_pred cccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCcccHHHHHHccCCccccEEEEecccCCCCC
Q 020439 126 EHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPV 205 (326)
Q Consensus 126 ~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~ 205 (326)
||....||++||||+|++++++|+|++.|++.+..++++|.|+|++|||.+.|++++++++.++++|+++++|.+++.+.
T Consensus 110 Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~~~ 189 (404)
T 1ysj_A 110 PFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDLPV 189 (404)
T ss_dssp TTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTSCT
T ss_pred CcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCCCC
Confidence 66666789999999999999999999999987778899999999999998789999999887777899999887776666
Q ss_pred cceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcCCccccccC
Q 020439 206 GTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPD 285 (326)
Q Consensus 206 g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~n~iP~ 285 (326)
|.+....|..++|..+++|+++|+++|++.|+.|.||+..+++++.+|+++..+..++...++++++.|+||+..|+||+
T Consensus 190 g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~ 269 (404)
T 1ysj_A 190 GTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVIPD 269 (404)
T ss_dssp TEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSCCS
T ss_pred ceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCceecC
Confidence 76655555446799999999999999999999999999999999999987654444555678999999999999999999
Q ss_pred eEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 286 SVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 286 ~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
+|++.+|+|++|.++.+++.++|++++++.+..+++++++
T Consensus 270 ~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~ 309 (404)
T 1ysj_A 270 QAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEF 309 (404)
T ss_dssp EEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 9999999999999999999999999999998888887664
No 3
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=4.1e-49 Score=377.02 Aligned_cols=282 Identities=29% Similarity=0.465 Sum_probs=234.0
Q ss_pred HHHHhhcCchhHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc--------------------------
Q 020439 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------------------------- 91 (326)
Q Consensus 38 ~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------------------------- 91 (326)
++.+++++.+ +++++++++|+++||++++|.++++||.++|+++||+++...
T Consensus 4 ~~~~~~~~~~--~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (445)
T 3io1_A 4 QLDEYLRQLA--PSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERARE 81 (445)
T ss_dssp CHHHHHHTTH--HHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHH--HHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhcc
Confidence 5677888877 999999999999999999999999999999999999987642
Q ss_pred -------------cCceEEEEECCC-CCcEEEEEeecCcccCcCCCCCccc-------CccCCeeecCCchHHHHHHHHH
Q 020439 92 -------------AVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHK-------SKVPGKMHACGHDAHVAMLLGA 150 (326)
Q Consensus 92 -------------~~~nvia~~~~~-~~~~I~l~~H~DtVp~~~~~~w~~~-------~~~~g~l~GrG~k~~~a~~l~a 150 (326)
+++|++++++++ ++|+|+|++||||||+++...|+++ +..+|++||||+|+++|++|+|
T Consensus 82 ~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~a 161 (445)
T 3io1_A 82 QGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGL 161 (445)
T ss_dssp TTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHH
T ss_pred ccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHH
Confidence 568999999665 4699999999999999888889643 4567999999999999999999
Q ss_pred HHHHHhccCCCCceEEEEEecCCCCcccHHHHHHccCCccccEEEEecccCCCCCcceeeccccccccceEEEEEEEecC
Q 020439 151 AKMLQVFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKG 230 (326)
Q Consensus 151 ~~~l~~~~~~~~~~i~~~~~~dEE~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~ 230 (326)
++.|++.+.+++++|.|+|++|||++.|++.++++|.++++|++++.|+.+..|.|.+.+..+. ..|..+++|+++|++
T Consensus 162 a~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g-~~a~~~~~i~v~Gk~ 240 (445)
T 3io1_A 162 AHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDN-FMATTKFDVQFSGVA 240 (445)
T ss_dssp HHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCC-BCEEEEEEEEEECCC
T ss_pred HHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCC-eeEEEEEEEEEEeec
Confidence 9999988778999999999999998899999999998888999999988766677776543221 123479999999999
Q ss_pred CCc-CCCCCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHH
Q 020439 231 GHA-AIPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIE 309 (326)
Q Consensus 231 ~Hs-s~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~ 309 (326)
+|+ +.|+.|+|||..+++++..|+.+. +..+ +..+++++.|+||.+.|+||++|++.+|+|+.|.++.+++.++|+
T Consensus 241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~-~~~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~ 317 (445)
T 3io1_A 241 AHAGGKPEDGRNALLAAAQAALGLHAIP-PHSA--GASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQ 317 (445)
T ss_dssp SSTTCCGGGCCCHHHHHHHHHHHHHTCC-CBTT--BCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCCCcCCcCHHHHHHHHHHHHHHHH-hhcC--CCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHH
Confidence 998 699999999999999999998873 2222 357899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCeeee
Q 020439 310 EVHLLIVANSNSFYSW 325 (326)
Q Consensus 310 ~~~~~~~~~~~~~~~~ 325 (326)
++++.++..+++++++
T Consensus 318 ~~~~~~a~~~g~~~~i 333 (445)
T 3io1_A 318 HVVAGAAAMYEARYEL 333 (445)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCeEEE
Confidence 9999999999987764
No 4
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.1e-46 Score=359.19 Aligned_cols=283 Identities=14% Similarity=0.148 Sum_probs=241.8
Q ss_pred hcccccHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeec--------------------
Q 020439 31 ELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP-------------------- 90 (326)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~-------------------- 90 (326)
+.+...+++.+++++++ +++++++++|+++||+|++|.++++||.++|+++|++++..
T Consensus 9 ~~~~~~~~i~~~i~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (433)
T 3pfo_A 9 KSDAITQSLRAAVDRNF--NDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTID 86 (433)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCC
T ss_pred cCHHHHHHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhcccccccccccc
Confidence 44556788999999988 99999999999999999999999999999999999998652
Q ss_pred -ccCceEEEEECCC-CCcEEEEEeecCcccCcCCCCCccc----CccCCeeecCCc---hHHHHHHHHHHHHHHhccCCC
Q 020439 91 -VAVTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEI 161 (326)
Q Consensus 91 -~~~~nvia~~~~~-~~~~I~l~~H~DtVp~~~~~~w~~~----~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~ 161 (326)
++++|++++++++ ++|+|+|+|||||||.++.+.|..+ .+++|++||||+ |++++++|+|+++|++.+.++
T Consensus 87 ~~~~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~ 166 (433)
T 3pfo_A 87 PAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAP 166 (433)
T ss_dssp GGGCEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEE
T ss_pred CCCCcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4578999999653 5689999999999999877788644 256899999998 899999999999999887778
Q ss_pred CceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCC
Q 020439 162 KGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTI 240 (326)
Q Consensus 162 ~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~ 240 (326)
+++|.|+|++||| ++.|++.+++++. ++|+++..+ |++. ....+++|..+++|+++|+++|+|.|+.|.
T Consensus 167 ~~~v~~~~~~~EE~g~~G~~~~~~~~~--~~d~~i~~e-----p~~~---~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~ 236 (433)
T 3pfo_A 167 DARVHVQTVTEEESTGNGALSTLMRGY--RADACLIPE-----PTGH---TLTRAQVGAVWFRLRVRGTPVHVAYSETGT 236 (433)
T ss_dssp SSCEEEEEESCTTTTCHHHHHHHHTTC--CCSEEEECC-----CCSS---CEEEEECEEEEEEEEEECCCCBGGGGGGSC
T ss_pred CccEEEEEEecCccCChhHHHHHhcCC--CCCEEEEeC-----CCCC---ceEEecceEEEEEEEEEcCCCccCCCCcCc
Confidence 9999999999999 6789999998874 578887642 3331 113356899999999999999999999999
Q ss_pred cHHHHHHHHHHHHhHhhhcc-----cCC-----CCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHH
Q 020439 241 DPIVAASNVIVSLQHLVSRE-----ADP-----LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEE 310 (326)
Q Consensus 241 NAi~~~~~~i~~l~~~~~~~-----~~~-----~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~ 310 (326)
||+..+++++..|+.+..+. .++ ..+.+++++.|+||...|+||++|++.+++|++|.++.+++.++|++
T Consensus 237 nAi~~~~~~i~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~ 316 (433)
T 3pfo_A 237 SAILSAMHLIRAFEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEK 316 (433)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHH
Confidence 99999999999998875321 122 23568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcC------Ceeee
Q 020439 311 VHLLIVANSN------SFYSW 325 (326)
Q Consensus 311 ~~~~~~~~~~------~~~~~ 325 (326)
++++.+++++ ++++|
T Consensus 317 ~~~~~~~~~~~~~~~~~~v~~ 337 (433)
T 3pfo_A 317 CLADAQATDSFLSENPAELVW 337 (433)
T ss_dssp HHHHHHTTCHHHHHSCCEEEE
T ss_pred HHHHHhhhCcccccCCeEEEE
Confidence 9999887653 56655
No 5
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=8.1e-45 Score=342.14 Aligned_cols=278 Identities=17% Similarity=0.195 Sum_probs=233.2
Q ss_pred ccccHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcch---HHHHHHHHHHHhhcCCCeeecc-----cCceEEEEECCCC
Q 020439 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFPV-----AVTGVVGYIGTGQ 104 (326)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~~-----~~~nvia~~~~~~ 104 (326)
+++..++.+++++++ +++++++++|++|||+|++| .++++||.++|+++|++++... .++|+++++++..
T Consensus 4 ~~~~~~~~~~~~~~~--~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~ 81 (393)
T 1cg2_A 4 QKRDNVLFQAATDEQ--PAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRG 81 (393)
T ss_dssp CCCCHHHHHHHHHHH--HHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSS
T ss_pred cchhhHHHHHHHhhH--HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCC
Confidence 466778999999887 99999999999999999876 6899999999999999987654 2469999996543
Q ss_pred CcEEEEEeecCcccCc-CCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccH
Q 020439 105 PPFVALRADMDALAME-ESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (326)
Q Consensus 105 ~~~I~l~~H~DtVp~~-~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~ 179 (326)
+|+|+|++||||||+. +...|||. .++|++||||+ |++++++|+|++.|++.+.+++++|.|+|+++|| ++.|+
T Consensus 82 ~~~i~l~aH~D~vp~~~~~~~~Pf~-~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~ 160 (393)
T 1cg2_A 82 GKNLLLMSHMDTVYLKGILAKAPFR-VEGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGS 160 (393)
T ss_dssp CCCEEEEEECCBSCCTTHHHHSCCE-EETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTT
T ss_pred CceEEEEEecCcCCCCCccccCCee-eeCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccH
Confidence 4899999999999974 33457787 67899999996 7999999999999999877778899999999999 66899
Q ss_pred HHHHHccCCccccEEEEecccCCC-CCcceeeccccccccceEEEEEEEecCCCcC-CCCCCCcHHHHHHHHHHHHhHhh
Q 020439 180 KKMLDAGALENVEAIFGLHVSSLF-PVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLV 257 (326)
Q Consensus 180 ~~l~~~g~~~~~d~~i~~~~~~~~-~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss-~p~~g~NAi~~~~~~i~~l~~~~ 257 (326)
+++++++. .++|+++..++ +. +.+.+. .+++|..+++|+++|+++|++ .|+.|.||+..+++++.+|+.+.
T Consensus 161 ~~~~~~~~-~~~d~~i~~e~--~~~~~~~i~----~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~ 233 (393)
T 1cg2_A 161 RDLIQEEA-KLADYVLSFEP--TSAGDEKLS----LGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNID 233 (393)
T ss_dssp HHHHHHHH-HHCSEEEECCC--EETTSCEEE----SEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHh-hcCCEEEEeCC--CCCCCCcEE----EeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhh
Confidence 99988643 35788887543 22 233332 345799999999999999997 79999999999999999998764
Q ss_pred hcccCCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 258 SREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 258 ~~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
.+....+++++.|+||...|+||++|++.+|+|++|.++.+++.++|++++++ +..++++++|
T Consensus 234 ----~~~~~~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~ 296 (393)
T 1cg2_A 234 ----DKAKNLRFNWTIAKAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKV 296 (393)
T ss_dssp ----BTTTTEEEEEEEEEECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEE
T ss_pred ----CcccCceEEEEEEeCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEE
Confidence 23346799999999999999999999999999999999999999999999876 3345665543
No 6
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=2.1e-44 Score=339.32 Aligned_cols=264 Identities=25% Similarity=0.381 Sum_probs=231.5
Q ss_pred cHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeeccc--CceEEEEECCC-CCcEEEEEe
Q 020439 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVA--VTGVVGYIGTG-QPPFVALRA 112 (326)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~--~~nvia~~~~~-~~~~I~l~~ 112 (326)
.+++.+++++++ +++++++++|+++||+|++|.++++||.++|+++|++++.+.. ++|++++++++ ++|+|+|.+
T Consensus 4 ~~~i~~~~~~~~--~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~a 81 (394)
T 3ram_A 4 KQQILDYIETNK--YSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLA 81 (394)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEE
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEE
Confidence 357788888877 9999999999999999999999999999999999999887533 57999999664 469999999
Q ss_pred ecCcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCc--ccHH-HHHHccCCc
Q 020439 113 DMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG--GGAK-KMLDAGALE 189 (326)
Q Consensus 113 H~DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~--~G~~-~l~~~g~~~ 189 (326)
|||||| |++||||+|...+++|+|++.|++.+..++++|.|+|++|||++ .|++ .+++.|.++
T Consensus 82 h~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~ 147 (394)
T 3ram_A 82 EYDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVID 147 (394)
T ss_dssp CCCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGG
T ss_pred ecccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCcc
Confidence 999999 55799999988899999999999876678999999999999953 7999 999999888
Q ss_pred cccEEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcC-CCCCCCcHHHHHHHHHHHHhHhhhcccCCCCCce
Q 020439 190 NVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQV 268 (326)
Q Consensus 190 ~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t 268 (326)
++|++++.|+.++. ..+..++|..+++|+++|+++|+| .|+.|+|||..+++++..|+.+.... + ...+
T Consensus 148 ~~d~~~~~h~~~~~-------~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~--~-~~~~ 217 (394)
T 3ram_A 148 QIDIALMIHPGNET-------YKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHI--K-KDQR 217 (394)
T ss_dssp GCSEEECCEEESSB-------BCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGS--C-TTCE
T ss_pred cCCEEEEECCcccc-------CCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhC--C-CCCe
Confidence 89999988765432 224456899999999999999999 99999999999999999998874321 1 2357
Q ss_pred EEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 269 LTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 269 ~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
++++.++||++.|+||++|++.+|+|+.+.++.+++.++|++++++++..+++++++
T Consensus 218 ~~~~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei 274 (394)
T 3ram_A 218 VHGVILDGGKAANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEF 274 (394)
T ss_dssp EEEEEEEBCSCTTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred eEEEEEECCCCCceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 788899999999999999999999999999999999999999999999999987664
No 7
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=4.9e-43 Score=338.53 Aligned_cols=280 Identities=13% Similarity=0.170 Sum_probs=228.7
Q ss_pred ccccHHHHHhhcCchhHHHHHHHHHHhhhCCCC--Ccc------hHHHHHHHHHHHhhcCCCeeecc--------c----
Q 020439 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPEL--GFQ------EFETSKLIRAELDQMGIPYKFPV--------A---- 92 (326)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~~l~~l~~ips~--s~~------e~~~~~~l~~~l~~~G~~~~~~~--------~---- 92 (326)
++..+++.+++++++ +++++++++|++|||+ |++ |.++++||.++|+++|++++... +
T Consensus 10 ~~~~~~i~~~i~~~~--~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~ 87 (485)
T 3dlj_A 10 PALLEKVFQYIDLHQ--DEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLP 87 (485)
T ss_dssp STTHHHHHHHHHHTH--HHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEE
T ss_pred hHHHHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccC
Confidence 467788999999988 9999999999999999 887 67899999999999999987642 2
Q ss_pred -CceEEEEECCC-CCcEEEEEeecCcccCcCCCCCccc---C-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCc
Q 020439 93 -VTGVVGYIGTG-QPPFVALRADMDALAMEESVEWEHK---S-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKG 163 (326)
Q Consensus 93 -~~nvia~~~~~-~~~~I~l~~H~DtVp~~~~~~w~~~---~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~ 163 (326)
.+|++++++++ ++|+|+|+|||||||.++.+.|+.. . +++|++||||+ |++++++|+|+++|++.+.++++
T Consensus 88 ~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 167 (485)
T 3dlj_A 88 IPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPV 167 (485)
T ss_dssp CCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred CCcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 25799999764 4589999999999999876678643 3 47899999998 79999999999999998878999
Q ss_pred eEEEEEecCCC-CcccHHHHHHccC---CccccEEEEecccCCC-CCcceeeccccccccceEEEEEEEecCC--CcCCC
Q 020439 164 TIVLVFQPAEE-GGGGAKKMLDAGA---LENVEAIFGLHVSSLF-PVGTVASRPGPTLAAGGFFEAVINGKGG--HAAIP 236 (326)
Q Consensus 164 ~i~~~~~~dEE-~~~G~~~l~~~g~---~~~~d~~i~~~~~~~~-~~g~~~~~~g~~~~G~~~~~i~~~G~~~--Hss~p 236 (326)
+|.|+|+++|| ++.|++.+++++. ++++|++++.++.... ....+ ..+++|..+++|+++|+++ |+|.
T Consensus 168 ~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----~~g~~g~~~~~i~v~G~~~~~H~~~- 242 (485)
T 3dlj_A 168 NIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAI----TYGTRGNSYFMVEVKCRDQDFHSGT- 242 (485)
T ss_dssp EEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEE----EEEECEEEEEEEEEESCSSCEETTT-
T ss_pred cEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeE----EEeccceEEEEEEEEECCCCCcCCC-
Confidence 99999999999 6689999999763 5678999887642110 11122 2246899999999999999 9997
Q ss_pred CCCCcHHHHHHHHHHHHhHhhhcc-----------cCC-------------C---------------------------C
Q 020439 237 QHTIDPIVAASNVIVSLQHLVSRE-----------ADP-------------L---------------------------D 265 (326)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~-----------~~~-------------~---------------------------~ 265 (326)
.|.||+..+..++..|+.+..+. ..| + .
T Consensus 243 -~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 321 (485)
T 3dlj_A 243 -FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWR 321 (485)
T ss_dssp -STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHT
T ss_pred -CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhc
Confidence 35566666666555555443221 111 1 1
Q ss_pred CceEEEEEEEcC----CccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcC
Q 020439 266 SQVLTVAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSN 320 (326)
Q Consensus 266 ~~t~~i~~i~gG----~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~ 320 (326)
.++++++.|+|| ++.|+||++|++.+++|+.+.++.+++.++|+++++..+.+++
T Consensus 322 ~~~~~v~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g 380 (485)
T 3dlj_A 322 YPSLSIHGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRN 380 (485)
T ss_dssp SCEEEEEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccC
Confidence 578999999999 8999999999999999999999999999999999999999887
No 8
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=100.00 E-value=6.2e-44 Score=333.34 Aligned_cols=263 Identities=17% Similarity=0.172 Sum_probs=218.8
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCC-eeecccCceEEEEECCCCCcEEEEEeecCcccCcCCCCCccc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHK 128 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~~~~~I~l~~H~DtVp~~~~~~w~~~ 128 (326)
+++++++++|+++||+|++|.++++||.++|+++|++ ++....++|++++++++++|+|+|+|||||||+++ .|++.
T Consensus 13 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~~~ 90 (369)
T 3tx8_A 13 GDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLPSR 90 (369)
T ss_dssp SCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCSCE
T ss_pred HHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCCCe
Confidence 7789999999999999999999999999999999984 55444467999999765569999999999999876 45543
Q ss_pred CccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cc--ccHHHHHHccC-CccccEEEEecccC
Q 020439 129 SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--GGAKKMLDAGA-LENVEAIFGLHVSS 201 (326)
Q Consensus 129 ~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~--~G~~~l~~~g~-~~~~d~~i~~~~~~ 201 (326)
.++|++||||+ |++++++|+|+++|++. ..++++|.|+|+++|| ++ .|++.+++++. ..+.|+++. .++
T Consensus 91 -~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~-~~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~--~ep 166 (369)
T 3tx8_A 91 -VEDGIMYGCGTVDMKSGLAVYLHTFATLATS-TELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALL--GEP 166 (369)
T ss_dssp -ECSSEEESSSTTTTHHHHHHHHHHHHHHTSC-TTCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEE--CCC
T ss_pred -EECCEEEcCCcccchHHHHHHHHHHHHHHhh-cCCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEE--eCC
Confidence 45899999998 59999999999999874 4689999999999999 44 69999998752 113455554 333
Q ss_pred CCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcccC--CC-CCceEEEEEEEcCC
Q 020439 202 LFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREAD--PL-DSQVLTVAKFEGGG 278 (326)
Q Consensus 202 ~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~~~--~~-~~~t~~i~~i~gG~ 278 (326)
.. +.+. .+++|..+++|+++|+++|++.|+.|.||+..+++++..|+++..+... +. ...+++++.|+||.
T Consensus 167 ~~--~~i~----~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~ 240 (369)
T 3tx8_A 167 TG--GWIE----AGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGV 240 (369)
T ss_dssp CT--TCEE----ESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECS
T ss_pred CC--Ccee----eecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCC
Confidence 32 3332 3468999999999999999999999999999999999999887533211 21 24689999999999
Q ss_pred ccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 279 AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 279 ~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
..|+||++|++.+|+|++|.++.+++.++|++++++.+ .++++++|
T Consensus 241 ~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~ 286 (369)
T 3tx8_A 241 ANNVIPDLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAV 286 (369)
T ss_dssp BTTBCCSEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEE
T ss_pred CCccccCcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEE
Confidence 99999999999999999999999999999999998876 67777765
No 9
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=4.8e-43 Score=330.05 Aligned_cols=261 Identities=19% Similarity=0.296 Sum_probs=217.2
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeec--ccCceEEEEECCCCCcEEEEEeecCcccCcCCCCCcc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~I~l~~H~DtVp~~~~~~w~~ 127 (326)
+++++++++|+++||+|++|.++++||.++|+++|++++.. +..+|++++++. ++|+|+|++||||||.++..+|++
T Consensus 6 ~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~Vp~~~~~~w~~ 84 (393)
T 1vgy_A 6 TQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWDS 84 (393)
T ss_dssp SHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSSEEEEEEECCBCCCCCGGGSSS
T ss_pred HHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEECC-CCCEEEEEcccCCcCCCCcccCCC
Confidence 67999999999999999999999999999999999998763 356899999943 358999999999999987778954
Q ss_pred c---C-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCC-c-ccHHHHHHccCC--ccccEEEE
Q 020439 128 K---S-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGAL--ENVEAIFG 196 (326)
Q Consensus 128 ~---~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~-~G~~~l~~~g~~--~~~d~~i~ 196 (326)
+ . ++||++||||+ |++++++|+|++.|++.+.+++++|.|+|++|||+ + .|++.+++.+.. ..+|+++.
T Consensus 85 ~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (393)
T 1vgy_A 85 PPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCIV 164 (393)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEEE
Confidence 3 3 56899999998 79999999999999887777899999999999994 3 799988775432 24677776
Q ss_pred ecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcc-cCCCCCceEEEEEEE
Q 020439 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (326)
Q Consensus 197 ~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~ 275 (326)
.++....+.+.. + ..+.+|..+++|+++|+++|++.|+.|.||+..+++++.+|+....+. .++..+.+++++.|+
T Consensus 165 ~e~~~~~~~g~~-i--~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 241 (393)
T 1vgy_A 165 GEPTAVDKLGDM-I--KNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNIN 241 (393)
T ss_dssp CCCCBSSSTTSE-E--ECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEE
T ss_pred eCCCCcccCCce-e--EEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEc
Confidence 443322223332 1 234579999999999999999999999999999999999998764222 123456799999999
Q ss_pred cCC-ccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHH
Q 020439 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLL 314 (326)
Q Consensus 276 gG~-~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 314 (326)
||. ..|+||++|++.+|+|++|.++.+++.++|++++++
T Consensus 242 gG~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~ 281 (393)
T 1vgy_A 242 GGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK 281 (393)
T ss_dssp ECCSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 997 899999999999999999999999999999988764
No 10
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=4.4e-43 Score=326.12 Aligned_cols=248 Identities=18% Similarity=0.165 Sum_probs=210.1
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECC-C-CCcEEEEEeecCcccCcCCCCCc-
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT-G-QPPFVALRADMDALAMEESVEWE- 126 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~-~-~~~~I~l~~H~DtVp~~~~~~w~- 126 (326)
+++++++++|+++||+|++|.++++|+.++|+++|++++.+ .+|+++++++ + ++|+|+|.+||||||.++ .|+
T Consensus 11 ~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~--~w~~ 86 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN--GWRK 86 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------
T ss_pred HHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC--CCCC
Confidence 88999999999999999999999999999999999999876 7899999954 3 358999999999999875 575
Q ss_pred --ccC-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCC-c-ccHHHHHHccCCccccEEEEec
Q 020439 127 --HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGALENVEAIFGLH 198 (326)
Q Consensus 127 --~~~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~-~G~~~l~~~g~~~~~d~~i~~~ 198 (326)
|.+ ++||++||||+ |++++++|+|++.|++.+ ++++|.|+|+++||. + .|++++++++ .++|+++..
T Consensus 87 ~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~~g~~G~~~~~~~~--~~~d~~i~~- 161 (356)
T 3ct9_A 87 DPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTS--QNYNLIYLASCEEEVSGKEGIESVLPGL--PPVSFAIVG- 161 (356)
T ss_dssp --CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSC--CSSEEEEEEECCGGGTCTTTHHHHGGGS--CCCSEEEEC-
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcC--CCCCEEEEEEeCcccCCccCHHHHHhhC--CCCCEEEEc-
Confidence 433 35899999998 789999999999999876 889999999999995 5 8999999876 357766643
Q ss_pred ccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcccCC-CCCceEEEEEEEcC
Q 020439 199 VSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADP-LDSQVLTVAKFEGG 277 (326)
Q Consensus 199 ~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~-~~~~t~~i~~i~gG 277 (326)
++.. +.+ +..++|..+++|+++|+++|++.| .|.|||..+++++.+|+.+..+..++ .+..+++++.|+||
T Consensus 162 -ep~~--~~i----~~~~~G~~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~gG 233 (356)
T 3ct9_A 162 -EPTE--MQP----AIAEKGLMVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAG 233 (356)
T ss_dssp -CSBT--TCC----EEEECCCEEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEEC
T ss_pred -CCCC--ceE----EEeeeEEEEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEecC
Confidence 2221 222 234679999999999999999999 99999999999999998865433333 35679999999999
Q ss_pred CccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHH
Q 020439 278 GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLL 314 (326)
Q Consensus 278 ~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 314 (326)
...|+||++|++.+|+|++|.++.+++.++|+++++.
T Consensus 234 ~~~NviP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~ 270 (356)
T 3ct9_A 234 TQHNVVPDKCTFVVDIRSNELYSNEDLFAEIRKHIAC 270 (356)
T ss_dssp SSTTBCCSEEEEEEEEECCTTCCHHHHHHHHHHHCCS
T ss_pred CcCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999988653
No 11
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=100.00 E-value=2.5e-42 Score=322.97 Aligned_cols=261 Identities=19% Similarity=0.250 Sum_probs=210.6
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeee--cccCceEEEEECCCCCcEEEEEeecCcccCcCCCCCcc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKF--PVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~--~~~~~nvia~~~~~~~~~I~l~~H~DtVp~~~~~~w~~ 127 (326)
+++++++++|+++||+|++|.++++||.++|+++|++++. .++.+|++++++ .++|+|+|.+||||||.++.+.|+.
T Consensus 3 ~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g-~~~~~i~l~aH~D~vp~~~~~~w~~ 81 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHG-TSEPVIAFAGHTDVVPTGDENQWSS 81 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEE-SSSCEEEEEEECCBCCCCCGGGCSS
T ss_pred hHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeC-CCCCEEEEeccccccCCCCcccCCC
Confidence 7899999999999999999999999999999999999885 345689999984 3458999999999999987778865
Q ss_pred c---C-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCC-c-ccHHHHHHccCC--ccccEEEE
Q 020439 128 K---S-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLDAGAL--ENVEAIFG 196 (326)
Q Consensus 128 ~---~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~-~G~~~l~~~g~~--~~~d~~i~ 196 (326)
+ . ++||++||||+ |++++++|.|++.+.+.+.+++++|.|+|+++||. + .|++.+++.... ..+|+++.
T Consensus 82 ~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~~ 161 (377)
T 3isz_A 82 PPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCMV 161 (377)
T ss_dssp CTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEEE
Confidence 4 3 36899999998 79999999999999887777899999999999994 4 699988765322 24787776
Q ss_pred ecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcc-cCCCCCceEEEEEEE
Q 020439 197 LHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSRE-ADPLDSQVLTVAKFE 275 (326)
Q Consensus 197 ~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~-~~~~~~~t~~i~~i~ 275 (326)
.++....+.+.. + ..+.+|..+++++++|+++|++.|+.|.||+..+++++.+|+....+. .....+++++++.++
T Consensus 162 ~e~~~~~~~g~~-i--~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i~ 238 (377)
T 3isz_A 162 GEPSSAKNLGDV-V--KNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIH 238 (377)
T ss_dssp CCCCBSSSTTSE-E--EEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEEE
T ss_pred cCCCCcccCCce-E--EEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEEE
Confidence 544332233332 1 234579999999999999999999999999999999999998764222 223467899999999
Q ss_pred cCC-ccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHH
Q 020439 276 GGG-AFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLL 314 (326)
Q Consensus 276 gG~-~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 314 (326)
||. ..|+||++|++.+|+|++|.++.+++.+++++++++
T Consensus 239 gg~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~ 278 (377)
T 3isz_A 239 AGTGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK 278 (377)
T ss_dssp ECCSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 998 899999999999999999999999999999888764
No 12
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-42 Score=327.14 Aligned_cols=270 Identities=19% Similarity=0.211 Sum_probs=223.0
Q ss_pred HHHHhhcCchhHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc-------cCceEEEEECCC----CCc
Q 020439 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG----QPP 106 (326)
Q Consensus 38 ~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~----~~~ 106 (326)
.+..+++.++ +++++++++|+++||+|++|.++++||.++|+++|++++.+. +.+|++++++++ ++|
T Consensus 14 ~~~~~~~~~~--~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~ 91 (396)
T 3rza_A 14 NLYFQGMINE--QRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVP 91 (396)
T ss_dssp -----CCSCH--HHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CC
T ss_pred ceeEEEeecH--HHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCC
Confidence 4456777877 999999999999999999999999999999999999988753 368999999653 468
Q ss_pred EEEEEeecCcccCcCCCCCcccCccCCeeecCCc-------hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cccc
Q 020439 107 FVALRADMDALAMEESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (326)
Q Consensus 107 ~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G 178 (326)
+|+|.+||||||+++ .|+.....+|++||||+ |++++++|+|++.|++.+ .++++|.|+|+++|| ++.|
T Consensus 92 ~i~l~aH~D~vp~g~--~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~~G 168 (396)
T 3rza_A 92 KLYLTSHMDTVVPAI--NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQ-IPHGQIQFVITVGEESGLIG 168 (396)
T ss_dssp CEEEEEECCBCSSCS--SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHT-CCCCCEEEEEESCGGGTSHH
T ss_pred eEEEEEECCccCCCC--CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcC-CCCCCEEEEEEcccccccHh
Confidence 999999999999875 46432233499999996 599999999999998876 368999999999999 6689
Q ss_pred HHHHHHccCCccccEEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhh
Q 020439 179 AKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVS 258 (326)
Q Consensus 179 ~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~ 258 (326)
++.+.+++. ..++.+ +.+++.+.+.+.+ +.+|..+++|+++|+++|+|.|+.|+||+..+++++..|+...
T Consensus 169 a~~~~~~~~--~~~~~~--~~~~~~~~g~i~~----~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~- 239 (396)
T 3rza_A 169 AKELNSELL--DADFGY--AIDASADVGTTVV----GAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQ- 239 (396)
T ss_dssp HHHCCGGGC--CCSEEE--EEEESSCTTCEEE----EECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEE-
T ss_pred Hhhhchhhc--ccceEE--EEecCCCcceEEE----cCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCC-
Confidence 998865543 234444 3444545565543 2468999999999999999999999999999999999987531
Q ss_pred cccCCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 259 READPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 259 ~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
.+ ...+++++.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..+++++++
T Consensus 240 --~~--~~~~~~vg~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i 302 (396)
T 3rza_A 240 --VD--EITTANIGKFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEV 302 (396)
T ss_dssp --EE--TTEEEEEEEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred --CC--CCceeeeeEEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 12 2478999999999999999999999999999999999999999999999999999887654
No 13
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=100.00 E-value=8.5e-42 Score=329.58 Aligned_cols=284 Identities=12% Similarity=0.087 Sum_probs=232.8
Q ss_pred ccHHHHHhhcCchhHH-HHHHHHHHhhhCCCCCcch---HHHHHHHHHHHhhcCCCeeec--ccCceEEEEECCC--CCc
Q 020439 35 IPVKFLDFAKKPEIFY-WMVNIRRKIHENPELGFQE---FETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTG--QPP 106 (326)
Q Consensus 35 ~~~~~~~~~~~~~~~~-~~i~~l~~l~~ips~s~~e---~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~--~~~ 106 (326)
.++++.+++++++ + ++++++++|++|||+|++| .++++||.++|+++|++++.. .+++|++++++++ ++|
T Consensus 30 ~m~~~~~~~~~~~--~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~ 107 (481)
T 2pok_A 30 EQEQIEKFEKDHV--AQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAK 107 (481)
T ss_dssp HHHHHHHHHHCHH--HHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCC
T ss_pred hHHHHHHHHHhhh--hHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCC
Confidence 3678999999987 9 9999999999999999876 899999999999999998775 3468999999643 358
Q ss_pred EEEEEeecCcccCcCCCCCc---ccC-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cccc
Q 020439 107 FVALRADMDALAMEESVEWE---HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGG 178 (326)
Q Consensus 107 ~I~l~~H~DtVp~~~~~~w~---~~~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G 178 (326)
+|+|+|||||||.++.+.|. |.. ++||++||||+ |++++++|+|++.|++.+..++++|.|+|++||| ++.|
T Consensus 108 ~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g 187 (481)
T 2pok_A 108 TLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTD 187 (481)
T ss_dssp EEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTT
T ss_pred eEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchh
Confidence 99999999999998777795 443 46899999997 8999999999999998755789999999999999 6689
Q ss_pred HHHHHHcc--CCccccEEEEecccCCCCC-cceeeccccccccceEEEEEEEecC--CCcCCCCCCCcHHHHHHHHHHHH
Q 020439 179 AKKMLDAG--ALENVEAIFGLHVSSLFPV-GTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTIDPIVAASNVIVSL 253 (326)
Q Consensus 179 ~~~l~~~g--~~~~~d~~i~~~~~~~~~~-g~~~~~~g~~~~G~~~~~i~~~G~~--~Hss~p~~g~NAi~~~~~~i~~l 253 (326)
++.+++++ .++++|+++..+ ++.+. +... ...+++|..+++|+++|++ +|++.|+.|.|||..+++++..|
T Consensus 188 ~~~~~~~~~~~~~~~d~~i~~~--~~~~~~~~~~--i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l 263 (481)
T 2pok_A 188 LDKYLEKHADKLRGADLLVWEQ--GTKNALEQLE--ISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSL 263 (481)
T ss_dssp HHHHHHHHHHHHTTCSEEECSC--CBBCTTSCEE--EECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHT
T ss_pred HHHHHHHhHhhccCCCEEEECC--CCccCCCCee--EEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHh
Confidence 99888764 133377777643 22221 1122 2346789999999999999 89999999999999999999998
Q ss_pred hHhh-----------------------hcc--------------cCC-------------CCCceEEEEEEEcCC----c
Q 020439 254 QHLV-----------------------SRE--------------ADP-------------LDSQVLTVAKFEGGG----A 279 (326)
Q Consensus 254 ~~~~-----------------------~~~--------------~~~-------------~~~~t~~i~~i~gG~----~ 279 (326)
+... .+. .++ ...+++|++.|+||. .
T Consensus 264 ~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~ 343 (481)
T 2pok_A 264 RAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGV 343 (481)
T ss_dssp BCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSC
T ss_pred hCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCC
Confidence 7642 000 000 024799999999986 6
Q ss_pred cccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 280 FNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 280 ~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
.|+||++|++.+|+|++|.++.+++.++|+++++..+. ++++++|
T Consensus 344 ~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~ 388 (481)
T 2pok_A 344 KTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYY 388 (481)
T ss_dssp CCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEE
T ss_pred CeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEE
Confidence 89999999999999999999999999999999987654 5666665
No 14
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=100.00 E-value=1.4e-41 Score=317.77 Aligned_cols=259 Identities=19% Similarity=0.212 Sum_probs=219.3
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc-------cCceEEEEECCC--CCcEEEEEeecCcccCc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVVGYIGTG--QPPFVALRADMDALAME 120 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvia~~~~~--~~~~I~l~~H~DtVp~~ 120 (326)
+++++++++|+++||+|++|.++++||.++|+++|++++.+. +++|+++++++. ++|+|+|.+||||||++
T Consensus 6 ~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~ 85 (373)
T 3gb0_A 6 ERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVVPG 85 (373)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCSSC
T ss_pred HHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccCCC
Confidence 889999999999999999999999999999999999988754 258999999653 46899999999999987
Q ss_pred CCCCCcccCccCCeeecCCc-------hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCcccc
Q 020439 121 ESVEWEHKSKVPGKMHACGH-------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVE 192 (326)
Q Consensus 121 ~~~~w~~~~~~~g~l~GrG~-------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d 192 (326)
+ .|+ +..++|++||||+ |++++++|++++.|++.+. ++++|.|+|+++|| ++.|++.+..++. ..+
T Consensus 86 ~--~~~-p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~-~~~~v~~~~~~~EE~g~~Ga~~~~~~~~--~~~ 159 (373)
T 3gb0_A 86 N--GIK-PSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNI-PHGTIEFIITVGEESGLVGAKALDRERI--TAK 159 (373)
T ss_dssp S--SCC-CEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTC-CCCCEEEEEESCGGGTSHHHHHSCGGGC--CCS
T ss_pred C--CcC-cEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCC-CCCCEEEEEEeccccCchhhhhhCHHhc--CCC
Confidence 5 463 2457899999995 5999999999999998764 78999999999999 6689998855432 234
Q ss_pred EEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcC-CCCCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEE
Q 020439 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTV 271 (326)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss-~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i 271 (326)
+.+ +.++..+.+.+.+ +.+|..+++|+++|+++|++ .|+.|+||+..+++++.+|+.. ..+ ...++++
T Consensus 160 ~~~--~~~~~~~~g~i~~----~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~--~~~~~~v 228 (373)
T 3gb0_A 160 YGY--ALDSDGKVGEIVV----AAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID--SETTANI 228 (373)
T ss_dssp EEE--EEEECSCTTEEEE----EECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE--TTEEEEE
T ss_pred EEE--EEcCCCCCCeEEE----cCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC--Cccccce
Confidence 444 3444445555543 34789999999999999999 8999999999999999988652 111 2468999
Q ss_pred EEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 272 AKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 272 ~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
+.|+||...|+||++|++.+|+|+.|.++.+++.++|++++++.+..+++++++
T Consensus 229 g~i~gG~~~Nvip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i 282 (373)
T 3gb0_A 229 GRFEGGTQTNIVCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADV 282 (373)
T ss_dssp EEEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEecCcccccccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999999999999999999999999999999999887664
No 15
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=100.00 E-value=2.2e-41 Score=326.60 Aligned_cols=276 Identities=15% Similarity=0.143 Sum_probs=228.2
Q ss_pred cHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcch------HHHHHHHHHHHhhcCCCeeecc--------cC-----ceE
Q 020439 36 PVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------FETSKLIRAELDQMGIPYKFPV--------AV-----TGV 96 (326)
Q Consensus 36 ~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e------~~~~~~l~~~l~~~G~~~~~~~--------~~-----~nv 96 (326)
++++.++++.++ +++++++++|++|||+|++| .++++||.++|+++|++++.+. ++ +|+
T Consensus 8 ~~~~~~~~~~~~--~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v 85 (479)
T 2zog_A 8 LKAVFQYIDENQ--DRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPIL 85 (479)
T ss_dssp HHHHHHHHHHTH--HHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEE
T ss_pred HHHHHHHHHHhH--HHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEE
Confidence 467888888877 99999999999999999876 7999999999999999987643 22 899
Q ss_pred EEEECCC-CCcEEEEEeecCcccCcCCCCCccc---C-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEE
Q 020439 97 VGYIGTG-QPPFVALRADMDALAMEESVEWEHK---S-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLV 168 (326)
Q Consensus 97 ia~~~~~-~~~~I~l~~H~DtVp~~~~~~w~~~---~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~ 168 (326)
+++++++ ++|+|+|++||||||.++...|+.+ . ++||++||||+ |++++++|+|++.|++.+.+++++|.|+
T Consensus 86 ~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~ 165 (479)
T 2zog_A 86 LGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFC 165 (479)
T ss_dssp EEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEE
T ss_pred EEEecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEE
Confidence 9999764 3589999999999999776678544 2 46899999995 7999999999999999887889999999
Q ss_pred EecCCC-CcccHHHHHHcc---CCccccEEEEecccCCCC-CcceeeccccccccceEEEEEEEecC--CCcCCCCCCCc
Q 020439 169 FQPAEE-GGGGAKKMLDAG---ALENVEAIFGLHVSSLFP-VGTVASRPGPTLAAGGFFEAVINGKG--GHAAIPQHTID 241 (326)
Q Consensus 169 ~~~dEE-~~~G~~~l~~~g---~~~~~d~~i~~~~~~~~~-~g~~~~~~g~~~~G~~~~~i~~~G~~--~Hss~p~~g~N 241 (326)
|++||| ++.|++.+++++ ++.++|++++.++....+ .+.+ ..+++|..+++|+++|++ +|+|.| |.|
T Consensus 166 ~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i----~~~~~G~~~~~i~v~G~~~~~Hs~~~--g~~ 239 (479)
T 2zog_A 166 LEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCI----TYGLRGICYFFIEVECSDKDLHSGVY--GGS 239 (479)
T ss_dssp EESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEE----EEEECEEEEEEEEEECCSSCEEHHHH--TTT
T ss_pred EecccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEE----EEecceEEEEEEEEEeCCCCCccCCC--CCC
Confidence 999999 668999999875 445678888764321111 2222 235689999999999999 999985 789
Q ss_pred HHHHHHHHHHHHhHhhhccc-----------C-------------CC---------------------------CCceEE
Q 020439 242 PIVAASNVIVSLQHLVSREA-----------D-------------PL---------------------------DSQVLT 270 (326)
Q Consensus 242 Ai~~~~~~i~~l~~~~~~~~-----------~-------------~~---------------------------~~~t~~ 270 (326)
|+..+++++..|+++..+.. . ++ ..++++
T Consensus 240 ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 319 (479)
T 2zog_A 240 VHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLS 319 (479)
T ss_dssp SCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEE
T ss_pred ccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeE
Confidence 99999999998876542210 0 00 147899
Q ss_pred EEEEEcC----CccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHc
Q 020439 271 VAKFEGG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANS 319 (326)
Q Consensus 271 i~~i~gG----~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~ 319 (326)
++.|+|| ...|+||++|++.+|+|+.|.++.+++.++|++++++.++++
T Consensus 320 v~~i~gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~ 372 (479)
T 2zog_A 320 LHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAEL 372 (479)
T ss_dssp EEEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred EeeeecCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhcc
Confidence 9999998 799999999999999999999999999999999999988765
No 16
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=2e-41 Score=326.15 Aligned_cols=281 Identities=12% Similarity=0.028 Sum_probs=223.0
Q ss_pred HHHHHhhcCchhHHHHHHHHHHhhhCCCCCcc----------hHHHHHHHHHHHhhcCCC---eee--ccc-CceEEEEE
Q 020439 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ----------EFETSKLIRAELDQMGIP---YKF--PVA-VTGVVGYI 100 (326)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~----------e~~~~~~l~~~l~~~G~~---~~~--~~~-~~nvia~~ 100 (326)
+++.+++++++ .+++++++++|++|||+|++ |.++++|+.++|+++||+ ++. ..+ ++|+++++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~ 84 (472)
T 3pfe_A 6 QGLYDYICQQW-QEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEI 84 (472)
T ss_dssp HHHHHHHHHHH-HHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEE
T ss_pred HHHHHHHHHhh-HHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEE
Confidence 46777877652 16799999999999999965 889999999999999996 433 223 57999999
Q ss_pred CCCCCcEEEEEeecCcccCcCCCCCc-----ccC-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEec
Q 020439 101 GTGQPPFVALRADMDALAMEESVEWE-----HKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQP 171 (326)
Q Consensus 101 ~~~~~~~I~l~~H~DtVp~~~~~~w~-----~~~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 171 (326)
++.++|+|+|+|||||||+. +.|+ |.. ++||++||||+ |++++++|+|+++|++.+..++ +|.|+|++
T Consensus 85 ~g~~~~~i~l~~H~D~vp~~--~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~-~v~~~~~~ 161 (472)
T 3pfe_A 85 PGQIDDTVLLYGHLDKQPEM--SGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYP-RCILIIEA 161 (472)
T ss_dssp CCSEEEEEEEEEECCBCCCC--SCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCE-EEEEEEES
T ss_pred cCCCCCeEEEEccccCCCCc--CCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCC-cEEEEEEe
Confidence 66445899999999999986 4675 333 57999999998 6999999999999998876666 99999999
Q ss_pred CCC-CcccHHHHHHcc--CCccccEEEEecccCCCCCcceeeccccccccceEEE--EEEEecCCCcCCCCCC-CcHHHH
Q 020439 172 AEE-GGGGAKKMLDAG--ALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFE--AVINGKGGHAAIPQHT-IDPIVA 245 (326)
Q Consensus 172 dEE-~~~G~~~l~~~g--~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~--i~~~G~~~Hss~p~~g-~NAi~~ 245 (326)
||| ++.|++.+++++ .+.++|++++.+.... +.+...+ ..+++|..+++ |+++|+++|+|.|+.+ .|||..
T Consensus 162 ~EE~g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~~~i--~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~ 238 (472)
T 3pfe_A 162 CEESGSYDLPFYIELLKERIGKPSLVICLDSGAG-NYEQLWM--TTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRV 238 (472)
T ss_dssp CGGGTSTTHHHHHHHHHHHHCCCSEEEEECCBCS-CSSSCEE--EEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHH
T ss_pred CCCCCChhHHHHHHHhHhhccCCCEEEEeCCCcC-CCCCeeE--EEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHH
Confidence 999 668999999875 3346889988764321 1122222 23457877766 5558999999988754 599999
Q ss_pred HHHHHHHHhHhh-hcc--------c-----------------------------CCCC------------CceEEEEEEE
Q 020439 246 ASNVIVSLQHLV-SRE--------A-----------------------------DPLD------------SQVLTVAKFE 275 (326)
Q Consensus 246 ~~~~i~~l~~~~-~~~--------~-----------------------------~~~~------------~~t~~i~~i~ 275 (326)
+++++.+|+.+. .+. . ++.. .++++++.|+
T Consensus 239 ~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~ 318 (472)
T 3pfe_A 239 ARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGAD 318 (472)
T ss_dssp HHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeee
Confidence 999999998762 100 0 0110 4799999999
Q ss_pred cC----CccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 276 GG----GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 276 gG----~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
|| ++.|+||++|++++|+|+.|.++.+++.++|+++++..+ .+++++++
T Consensus 319 gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v 371 (472)
T 3pfe_A 319 GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDF 371 (472)
T ss_dssp SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEE
T ss_pred cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEE
Confidence 87 689999999999999999999999999999999998875 67777665
No 17
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=100.00 E-value=2.5e-41 Score=315.22 Aligned_cols=246 Identities=16% Similarity=0.089 Sum_probs=208.9
Q ss_pred HHHHHHHHHhhhCCCCC---cchHHHHHHHHHHHhhcCCCeeecccCceEEEEEC---CCCCcEEEEEeecCcccCcCCC
Q 020439 50 YWMVNIRRKIHENPELG---FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIG---TGQPPFVALRADMDALAMEESV 123 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s---~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~---~~~~~~I~l~~H~DtVp~~~~~ 123 (326)
+++++++++|++|||+| ++|.++++||.++|+++|++++.. .+|+++.+. ++++|+|+|.+||||||. .
T Consensus 6 ~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~---~ 80 (364)
T 2rb7_A 6 QHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA---E 80 (364)
T ss_dssp HHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---C
T ss_pred HHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---C
Confidence 78999999999999999 889999999999999999998865 367888774 233589999999999986 2
Q ss_pred CCcccC-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCC---Cce--EEEEEecCCC-Cc-ccHHHHHHccCCcccc
Q 020439 124 EWEHKS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEI---KGT--IVLVFQPAEE-GG-GGAKKMLDAGALENVE 192 (326)
Q Consensus 124 ~w~~~~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~---~~~--i~~~~~~dEE-~~-~G~~~l~~~g~~~~~d 192 (326)
..||.+ +++|++||||+ |++++++|+|++.|++.+.++ +++ |.|+|++||| ++ .|++++++++ ++|
T Consensus 81 ~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~---~~d 157 (364)
T 2rb7_A 81 DDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLI---RAD 157 (364)
T ss_dssp GGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGC---EEE
T ss_pred CCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcC---CCC
Confidence 455654 35899999998 689999999999999876556 568 9999999999 44 7999998875 455
Q ss_pred EEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHhHhhhcccCC-C--CCceE
Q 020439 193 AIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQHLVSREADP-L--DSQVL 269 (326)
Q Consensus 193 ~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~~~~~~~~~~-~--~~~t~ 269 (326)
+++ +.++++|++ +. .+++|..+++|+++|+++|++.|+.|.||+..+++++..|+.+.. ++ . +..++
T Consensus 158 ~~i--~~d~~~p~~-i~----~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~---~~~~~~~~~~~ 227 (364)
T 2rb7_A 158 YVV--ALDGGNPQQ-VI----TKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFA---EENEDHWHRTV 227 (364)
T ss_dssp EEE--ECSSSBTTE-EE----EEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSC---CCCTTCCSCEE
T ss_pred EEE--EccCCcccc-eE----EEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhcc---chhhcCCCceE
Confidence 554 456667777 43 345799999999999999999999999999999999999987632 22 2 46899
Q ss_pred EEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHH
Q 020439 270 TVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHL 313 (326)
Q Consensus 270 ~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~ 313 (326)
+++.|+||...|+||++|++.+|+|++|.++.+++.++|+++++
T Consensus 228 ~vg~i~gG~~~NviP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~ 271 (364)
T 2rb7_A 228 NLGRIRAGESTNKVPDVAEGWFNIRVTEHDDPGALIDKIRKTVS 271 (364)
T ss_dssp EEEEEEECSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHCS
T ss_pred EEEEEecCCcCcccCcceEEEEEEeeCCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999988865
No 18
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=100.00 E-value=4.8e-41 Score=313.87 Aligned_cols=248 Identities=15% Similarity=0.125 Sum_probs=201.1
Q ss_pred hhcCchhHHHHHHHHHHhhhCCCCC--c---chHHHHHHHHHHHhhcCCCeeecc---cCceEEEEECCCCCcEEEEEee
Q 020439 42 FAKKPEIFYWMVNIRRKIHENPELG--F---QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTGQPPFVALRAD 113 (326)
Q Consensus 42 ~~~~~~~~~~~i~~l~~l~~ips~s--~---~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~~~~~I~l~~H 113 (326)
|+++++ +++++++++|++|||+| + +|.++++||.++|+ ||+++... +++|+++ +++. |+|+|.+|
T Consensus 3 ~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H 75 (369)
T 2f7v_A 3 HMTDLL--ASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVH 75 (369)
T ss_dssp CCCHHH--HHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEE
T ss_pred hhhhhh--HHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEee
Confidence 345555 89999999999999999 8 89999999999999 99987643 4689999 8654 78999999
Q ss_pred cCcccCcCCCCCcc---cC-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCC-c-ccHHHHHH
Q 020439 114 MDALAMEESVEWEH---KS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG-G-GGAKKMLD 184 (326)
Q Consensus 114 ~DtVp~~~~~~w~~---~~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~-~-~G~~~l~~ 184 (326)
|||||.++ .|++ .. ++||++||||+ |++++++|++++. ++++|.|+|++|||. + .|++++++
T Consensus 76 ~D~vp~~~--~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~-------~~~~v~~~~~~~EE~~g~~G~~~~~~ 146 (369)
T 2f7v_A 76 LDTVPDSP--HWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA-------GDGDAAFLFSSDEEANDPRCIAAFLA 146 (369)
T ss_dssp CCBCCCCS--SCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT-------CCCCEEEEEESCTTSSSCCHHHHHHT
T ss_pred ecccCCCC--CCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc-------CCCCEEEEEEeCcccCCCcCHHHHHh
Confidence 99999875 5754 33 46899999998 8999999998875 678999999999995 4 79999999
Q ss_pred ccCCccccEEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcCCCC-CCCcHHHHHHHHHHHHhHhhhccc--
Q 020439 185 AGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAAIPQ-HTIDPIVAASNVIVSLQHLVSREA-- 261 (326)
Q Consensus 185 ~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss~p~-~g~NAi~~~~~~i~~l~~~~~~~~-- 261 (326)
++. ++|+++..+ +. .+.+ ..+++|..+++|+++|+++|++.|+ .|.||+..+++++..|+.+..+..
T Consensus 147 ~~~--~~d~~i~~e--~~--~~~i----~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~ 216 (369)
T 2f7v_A 147 RGL--PYDAVLVAE--PT--MSEA----VLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHA 216 (369)
T ss_dssp TCC--CCSEEEECC--CS--TTCB----BCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCC--CCCEEEECC--CC--CCcc----eeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhccc
Confidence 865 578877642 22 1222 3456899999999999999999999 999999999999999987754321
Q ss_pred --CCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHH
Q 020439 262 --DPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLI 315 (326)
Q Consensus 262 --~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~ 315 (326)
++...++++++.|+||...|+||++|++.+|+|++|.++.+++.++|++++++.
T Consensus 217 ~~~~~~~~~~~vg~i~gG~~~NviP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~ 272 (369)
T 2f7v_A 217 RFGGLTGLRFNIGRVDGGIKANMIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA 272 (369)
T ss_dssp EETTEESCEEEEEEEEECSSTTSCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC
T ss_pred ccCcccCCceEEEEeecCCCCCcCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh
Confidence 221126999999999999999999999999999999999999999998886543
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=100.00 E-value=2.3e-39 Score=308.71 Aligned_cols=259 Identities=14% Similarity=0.095 Sum_probs=210.3
Q ss_pred HHHHHHHHHHhhhCCCCCc----------chHHHHHHHHHHHhhcCCC-eeecccCceEEEEECCC---CCcEEEEEeec
Q 020439 49 FYWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADM 114 (326)
Q Consensus 49 ~~~~i~~l~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~I~l~~H~ 114 (326)
.+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ..+|+++++++. .+|+|+|+||+
T Consensus 26 ~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~~H~ 104 (434)
T 3ife_A 26 KEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFLAHL 104 (434)
T ss_dssp HHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEEEEC
T ss_pred HHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEEEEc
Confidence 3789999999999999998 5689999999999999997 7765 478999999653 25899999999
Q ss_pred CcccCcCCCCCcccC----ccC----------------------------CeeecCCc-------hHHHHHHHHHHHHHH
Q 020439 115 DALAMEESVEWEHKS----KVP----------------------------GKMHACGH-------DAHVAMLLGAAKMLQ 155 (326)
Q Consensus 115 DtVp~~~~~~w~~~~----~~~----------------------------g~l~GrG~-------k~~~a~~l~a~~~l~ 155 (326)
||||..+ .|++++ ..| |+|||||+ |++++++|+|+++|+
T Consensus 105 DtVp~~~--~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L~ 182 (434)
T 3ife_A 105 DTATDFT--GKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLI 182 (434)
T ss_dssp CBCTTSC--CSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC--CCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHHH
Confidence 9999743 676542 112 58999995 899999999999999
Q ss_pred hccCCCCceEEEEEecCCCCcccHHHHHHccCCccccEEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcC-
Q 020439 156 VFRHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA- 234 (326)
Q Consensus 156 ~~~~~~~~~i~~~~~~dEE~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss- 234 (326)
+.+..++++|.|+|++|||++.|++.+.... + ++|++++.++. +.|.+.+ +.+|..+++|+++|+++|++
T Consensus 183 ~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~-~-~~d~~~~~d~~---~~g~i~~----~~~G~~~~~i~v~G~~~Hag~ 253 (434)
T 3ife_A 183 HNPQIKHGKIRVAFTPDEEIGRGPAHFDVEA-F-GASFAYMMDGG---PLGGLEY----ESFNAAGAKLTFNGTNTHPGT 253 (434)
T ss_dssp TCTTSCBCCEEEEEESCGGGTCTGGGCCHHH-H-CCSEEEECCCC---STTEEEC----CBCEEEEEEEEEECBCCCGGG
T ss_pred hCCCCCCCCEEEEEECCcccChHHHHhhhhh-c-CCCEEEEecCC---CCCceee----cCCCeEEEEEEEEEEecCCCC
Confidence 9877889999999999999658888774432 2 57888886532 3454433 45899999999999999988
Q ss_pred CCCCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHH
Q 020439 235 IPQHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLL 314 (326)
Q Consensus 235 ~p~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~ 314 (326)
.|+.|+|||..+++++..|+.+.... ..+.+++.+++| ..|+||++|++.+|+|+.|.++.+++.++|++++++
T Consensus 254 ~P~~g~nAi~~aa~~i~~l~~~~~~~-----~~~~~~g~i~~g-~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~ 327 (434)
T 3ife_A 254 AKNKMRNATKLAMEFNGHLPVEEAPE-----YTEGYEGFYHLL-SLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQ 327 (434)
T ss_dssp CTTTCBCHHHHHHHHHHTSCTTCSGG-----GCCTTCCEEEEE-EEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHHhcccccCCC-----cceeeeEEEEee-eEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 79999999999999999998752111 112223344444 378999999999999999999999999999999999
Q ss_pred HHHHcC---Ceeee
Q 020439 315 IVANSN---SFYSW 325 (326)
Q Consensus 315 ~~~~~~---~~~~~ 325 (326)
++++++ ++++|
T Consensus 328 ~~~~~g~~~~~v~~ 341 (434)
T 3ife_A 328 MQEKYGQDAVVLEM 341 (434)
T ss_dssp HHHHHCGGGEEEEE
T ss_pred HHHhcCCceEEEEE
Confidence 999988 55554
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=100.00 E-value=3.7e-39 Score=311.65 Aligned_cols=270 Identities=11% Similarity=0.074 Sum_probs=201.5
Q ss_pred HHHHHhhcCchhHHHHHHHHHHhhhCCCCCcch------------HHHHHHHHHHHhhcCCCeeecccCceEEEE--ECC
Q 020439 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGY--IGT 102 (326)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~--~~~ 102 (326)
.++.+++++++ +++++++++|++|||+|++| .++++|+.++|+++||+++..+ |+++. ++.
T Consensus 23 ~~i~~~i~~~~--~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~~---~~~~~~~~g~ 97 (492)
T 3khx_A 23 SMWKEKVQQYE--DQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD---HIAGRIEAGK 97 (492)
T ss_dssp CTTHHHHHTTH--HHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET---TTEEEEEEEC
T ss_pred HHHHHHHHHhH--HHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEeC---CEEEEEEeCC
Confidence 46778889988 99999999999999999987 4999999999999999987653 44443 333
Q ss_pred CCCcEEEEEeecCcccCcCCCCCcc---cC-ccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-
Q 020439 103 GQPPFVALRADMDALAMEESVEWEH---KS-KVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE- 174 (326)
Q Consensus 103 ~~~~~I~l~~H~DtVp~~~~~~w~~---~~-~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE- 174 (326)
.+|+|+|+|||||||+++ .|.+ .. ++||++||||+ |++++++|+|+++|++.+.+++++|.|+|++|||
T Consensus 98 -~~~~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~ 174 (492)
T 3khx_A 98 -GNDVLGILCHVDVVPAGD--GWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEES 174 (492)
T ss_dssp -SSCEEEEEEECCCCCCCS--CCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEECCTTC
T ss_pred -CCCEEEEEEeccCCCCCC--CcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccC
Confidence 358999999999999975 6854 32 57999999997 8999999999999999888889999999999999
Q ss_pred CcccHHHHHHccCCccccEEEEecccC-----------------------------------C-----CCCcc--eeecc
Q 020439 175 GGGGAKKMLDAGALENVEAIFGLHVSS-----------------------------------L-----FPVGT--VASRP 212 (326)
Q Consensus 175 ~~~G~~~l~~~g~~~~~d~~i~~~~~~-----------------------------------~-----~~~g~--~~~~~ 212 (326)
++.|+++++++.. .+|+.+..+.+. + .|... +...+
T Consensus 175 g~~g~~~~~~~~~--~~~~~~~~d~~~p~~~g~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~~n~vpd~~~aiv~ep 252 (492)
T 3khx_A 175 DWKCTDRYFKTEE--MPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVK 252 (492)
T ss_dssp CCCTTSHHHHHSC--CCSEEECSSCSSCSCCCBCEEEEEEEEECCCCCCCCCCSEEEEEEEECSCTTSCCCEEEEEEEEC
T ss_pred CCcCHHHHHHhCc--CCCEEEecCCCccEEEecCcEEEEEEEEeccccccccccceeEEecccccCCcCCchHheEeecc
Confidence 6789999998742 233322111000 0 00000 00000
Q ss_pred ---------------ccccccce-----EEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHh------Hhhh---c----
Q 020439 213 ---------------GPTLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLVS---R---- 259 (326)
Q Consensus 213 ---------------g~~~~G~~-----~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~------~~~~---~---- 259 (326)
..+.+|.. +++|+++|+++|+|.|+.|+|||..+++++.+|+ .+.. +
T Consensus 253 t~~~~~~~~~~~~~~~~g~kG~~~~~~~~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~ 332 (492)
T 3khx_A 253 ENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFN 332 (492)
T ss_dssp SCHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTT
T ss_pred cchHHHHHHHHHHHhhcCceeEEEecCCeEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCC
Confidence 12336778 9999999999999999999999999999999886 1110 0
Q ss_pred ----------ccC-CCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 260 ----------EAD-PLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 260 ----------~~~-~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
..+ ..+..++|++.|++|. |++|++.+|+|++|..+.+++.++++++++ ++++++++
T Consensus 333 ~~~~~~l~i~~~d~~~G~~t~n~g~i~~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~----~~g~~~~i 400 (492)
T 3khx_A 333 SDFGEKMGMKFHTDVMGDVTTNIGVITYDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQ----QYGFEVKL 400 (492)
T ss_dssp CTTSGGGTCC-------CCEEEEEEEEEET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHG----GGTEEEEE
T ss_pred CCCccccCCccccCCcCccEEeeeEEEEec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHH----HcCCEEEE
Confidence 011 1356899999999886 999999999999999999999999988865 45666554
No 21
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=100.00 E-value=1.7e-38 Score=301.31 Aligned_cols=252 Identities=14% Similarity=0.137 Sum_probs=209.5
Q ss_pred HHHHHHHHHhhhCCCCCc----------chHHHHHHHHHHHhhcCCC-eeecccCceEEEEECCC---CCcEEEEEeecC
Q 020439 50 YWMVNIRRKIHENPELGF----------QEFETSKLIRAELDQMGIP-YKFPVAVTGVVGYIGTG---QPPFVALRADMD 115 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~----------~e~~~~~~l~~~l~~~G~~-~~~~~~~~nvia~~~~~---~~~~I~l~~H~D 115 (326)
+++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ..+|+++++++. ++|+|+|.||||
T Consensus 2 ~~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D 80 (417)
T 1fno_A 2 DKLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVD 80 (417)
T ss_dssp CSHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECC
T ss_pred hHHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEecc
Confidence 457899999999999998 6889999999999999998 6654 468999999653 358999999999
Q ss_pred cccCcCCCCCccc--------Cc-----------------------cCCeeecCC-----c--hHHHHHHHHHHHHHHhc
Q 020439 116 ALAMEESVEWEHK--------SK-----------------------VPGKMHACG-----H--DAHVAMLLGAAKMLQVF 157 (326)
Q Consensus 116 tVp~~~~~~w~~~--------~~-----------------------~~g~l~GrG-----~--k~~~a~~l~a~~~l~~~ 157 (326)
|||..+ .|.++ .. .||++|||| + |++++++|+|++.|++.
T Consensus 81 ~Vp~~~--~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~ 158 (417)
T 1fno_A 81 TSPDFS--GKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGN 158 (417)
T ss_dssp BCTTSC--CSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSS
T ss_pred ccCCCC--CCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhC
Confidence 999875 46542 11 256899999 4 69999999999999988
Q ss_pred cCCCCceEEEEEecCCCCcccHHHHHHccCCccccEEEEecccCCCCCcceeeccccccccceEEEEEEEecCCCcC-CC
Q 020439 158 RHEIKGTIVLVFQPAEEGGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEAVINGKGGHAA-IP 236 (326)
Q Consensus 158 ~~~~~~~i~~~~~~dEE~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i~~~G~~~Hss-~p 236 (326)
+ .++++|.|+|++|||.+.|++.+.++++ .+|+++..+. . +.+.+. ...+|..+++|+++|+++|++ .|
T Consensus 159 ~-~~~~~v~~~~~~~EE~g~Ga~~~~~~~~--~~d~~i~~d~--~-~~g~i~----~~~~g~~~~~i~~~G~~~Hs~~~p 228 (417)
T 1fno_A 159 P-IPHGDIKVAFTPDEEVGKGAKHFDVEAF--GAQWAYTVDG--G-GVGELE----FENFNAASVNIKIVGNNVHPGTAK 228 (417)
T ss_dssp S-CCCCCEEEEEESCGGGTCTTTTCCHHHH--CCSEEEECCC--C-STTBEE----CCBCEEEEEEEEEECBCCCGGGCT
T ss_pred C-CCCCcEEEEEEeccccCCChhhhchhhc--CCCEEEEeCC--C-CcCeeE----EecCCceeEEEEEEeeccCCCCCc
Confidence 7 7889999999999995488888765543 4677776533 2 456543 346899999999999999999 79
Q ss_pred CCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHH
Q 020439 237 QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIV 316 (326)
Q Consensus 237 ~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~ 316 (326)
+.|.|||..+++++..|+.+..+........+++++.|+|| |++|++.+|+|+.|.++.+++.++|++++++.+
T Consensus 229 ~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~v~~i~gG------p~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~ 302 (417)
T 1fno_A 229 GVMVNALSLAARIHAEVPADEAPETTEGYEGFYHLASMKGT------VDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVG 302 (417)
T ss_dssp TTCBCHHHHHHHHHHTSCTTSSGGGCCTTCCEEEEEEEEEC------SSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHhhhccCCcccccccccEEEEEEEeec------cCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876433323334568999999988 999999999999999999999999999999998
Q ss_pred HHcC
Q 020439 317 ANSN 320 (326)
Q Consensus 317 ~~~~ 320 (326)
..++
T Consensus 303 ~~~~ 306 (417)
T 1fno_A 303 KGLH 306 (417)
T ss_dssp TTCC
T ss_pred HHcC
Confidence 8876
No 22
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=100.00 E-value=7.1e-37 Score=290.56 Aligned_cols=261 Identities=16% Similarity=0.146 Sum_probs=213.2
Q ss_pred hhcCchhHHHHHHHHHHhhhCCCCC----------cchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC-C-CcEEE
Q 020439 42 FAKKPEIFYWMVNIRRKIHENPELG----------FQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVA 109 (326)
Q Consensus 42 ~~~~~~~~~~~i~~l~~l~~ips~s----------~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~~~I~ 109 (326)
|++.++ +++++++++|++|||+| ++|.++++||.++|+++|++++.+. .+|++++++++ + +|+|+
T Consensus 3 ~~~~~~--~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~ 79 (423)
T 1z2l_A 3 LITHFR--QAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVL 79 (423)
T ss_dssp CHHHHH--HHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEE
T ss_pred cccccH--HHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEE
Confidence 344455 88999999999999998 6789999999999999999987653 45999999654 2 38999
Q ss_pred EEeecCcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCc------ccHHHHH
Q 020439 110 LRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKML 183 (326)
Q Consensus 110 l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~------~G~~~l~ 183 (326)
|.+||||||.+ .| .+.|++++++|+|++.|++.+.+++++|.|+|++|||++ .|++.+.
T Consensus 80 l~~H~D~Vp~~---g~------------~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~ 144 (423)
T 1z2l_A 80 SGSHIDTVVNG---GN------------LDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIF 144 (423)
T ss_dssp EEEECCCCTTB---CS------------STTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHT
T ss_pred EEEecCCCCCC---Cc------------cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHH
Confidence 99999999975 23 133689999999999999988789999999999999953 3888887
Q ss_pred H----cc--------------------CC---------ccccEEEEecccCCC---CCcc-eeeccccccccceEEEEEE
Q 020439 184 D----AG--------------------AL---------ENVEAIFGLHVSSLF---PVGT-VASRPGPTLAAGGFFEAVI 226 (326)
Q Consensus 184 ~----~g--------------------~~---------~~~d~~i~~~~~~~~---~~g~-~~~~~g~~~~G~~~~~i~~ 226 (326)
. ++ ++ .++|+++.+|.+++. +++. ..+ ...++|..+++|++
T Consensus 145 ~~~~~~~~~~~~~~d~~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~--~~~~~g~~~~~i~v 222 (423)
T 1z2l_A 145 GLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGV--VNAIVGQRRYTVTL 222 (423)
T ss_dssp TCCCGGGTSSCCCSSSCCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEE--EEEECEEEEEEEEE
T ss_pred cCCCHHHHhhhcCcCCcCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEE--EeeEecceEEEEEE
Confidence 5 22 11 145778888876541 1221 111 23467999999999
Q ss_pred EecCCCcC-CCC-CCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcC-CccccccCeEEEEEEEEccChhhHHH
Q 020439 227 NGKGGHAA-IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQ 303 (326)
Q Consensus 227 ~G~~~Hss-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~n~iP~~~~~~~diR~~~~~~~~~ 303 (326)
+|+++|++ .|+ .|.||+..+++++..|+++..+. ++ ..+++++.|+|| ...|+||++|++.+|+|++|.++.++
T Consensus 223 ~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~~-~~--~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~ 299 (423)
T 1z2l_A 223 NGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRM-GD--PLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRD 299 (423)
T ss_dssp ECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHHH-CT--TCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHH
T ss_pred EeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHhc-CC--CceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHH
Confidence 99999999 795 89999999999999998875432 22 578999999997 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCeeee
Q 020439 304 LKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 304 ~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
+.++|++++++.+..+++++++
T Consensus 300 i~~~i~~~~~~~~~~~g~~~~~ 321 (423)
T 1z2l_A 300 FTQQLENDMRAICDEMDIGIDI 321 (423)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHHHhCCeEEE
Confidence 9999999999999888887654
No 23
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=100.00 E-value=1e-36 Score=294.33 Aligned_cols=252 Identities=16% Similarity=0.115 Sum_probs=201.9
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC----CCcEEEEEeecCcccCcCCC--
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG----QPPFVALRADMDALAMEESV-- 123 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~----~~~~I~l~~H~DtVp~~~~~-- 123 (326)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. .+|+++++++. ++|+|+|.|||||||..+.+
T Consensus 14 ~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~ 92 (490)
T 3mru_A 14 APLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDP-TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTD 92 (490)
T ss_dssp HHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSC
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcC-CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcc
Confidence 889999999999999999999999999999999999988653 57999999642 45899999999999998643
Q ss_pred -CCccc----CccCCeeecCCc------hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccc
Q 020439 124 -EWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (326)
Q Consensus 124 -~w~~~----~~~~g~l~GrG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~ 191 (326)
.|..+ .+++|++||||+ |+++|++|+++ ++ ...++++|.|+|++||| ++.|++++++.. + +.
T Consensus 93 ~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l---~~-~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 166 (490)
T 3mru_A 93 HDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL---AS-KEIKHGPIEVLLTIDEEAGMTGAFGLEAGW-L-KG 166 (490)
T ss_dssp CCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH---HC-SSCCCCSEEEEEESCSSSTTGGGGTCCSSS-C-CS
T ss_pred cccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH---Hh-CCCCCCCEEEEEEcccccccHhHHHhhhcc-c-CC
Confidence 68654 246899999998 47888888765 33 33568999999999999 668999987653 2 45
Q ss_pred cEEEEecccCCCCCcceee--------------ccccccccceEEEEEEEe-cCCCcC-CCCCCC-cHHHHHHHHHHHHh
Q 020439 192 EAIFGLHVSSLFPVGTVAS--------------RPGPTLAAGGFFEAVING-KGGHAA-IPQHTI-DPIVAASNVIVSLQ 254 (326)
Q Consensus 192 d~~i~~~~~~~~~~g~~~~--------------~~g~~~~G~~~~~i~~~G-~~~Hss-~p~~g~-NAi~~~~~~i~~l~ 254 (326)
++++.++.. +.|.+.. .....++|..+++|+++| +++|++ .|+.|+ |||..+++++..|+
T Consensus 167 ~~~~~~d~~---~~g~~~~g~~~g~~~~~~~~~~~~~~~~g~~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~ 243 (490)
T 3mru_A 167 DILLNTDSE---QEGEVYMGCAGGIDGAMTFDITRDAIPAGFITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHA 243 (490)
T ss_dssp SEEEECCCC---CTTCCEEEECEEEEEEEEEECCEECCCTTEEEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHT
T ss_pred CEEEEcCCC---CCCeEEEecCCccceEEEeeeeeeccCCCceEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHH
Confidence 666665432 1222110 002356799999999999 999999 599999 99999999999987
Q ss_pred HhhhcccCCCCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCC
Q 020439 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNS 321 (326)
Q Consensus 255 ~~~~~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~ 321 (326)
+. .+++++.|+||...|+||++|++.+++|....+..+++.+++.+.++......+.
T Consensus 244 ~~----------~~~~v~~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (490)
T 3mru_A 244 QE----------LDLRLVEFRGGSLRNAIPREAFVTVALPAENQDKLAELFNYYTELLKTELGKIET 300 (490)
T ss_dssp TT----------TTCEEEEEEECSCTTEECCCEEEEEEEEGGGHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred hc----------CcEEEEEEECCCCCcccCCccEEEEEECcccHHHHHHHHHHHHHHHHHHhhccCC
Confidence 52 4689999999999999999999999999888777777777777777665544443
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=100.00 E-value=9.1e-36 Score=281.72 Aligned_cols=254 Identities=20% Similarity=0.193 Sum_probs=211.2
Q ss_pred HHHHHHHHHhhhCCCC----------CcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC-C-CcEEEEEeecCcc
Q 020439 50 YWMVNIRRKIHENPEL----------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-Q-PPFVALRADMDAL 117 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~----------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~-~~~I~l~~H~DtV 117 (326)
+++++++++|++|||+ |++|.++++||.++|+++|++++.+. .+|+++++++. + +|+|+|.+|||||
T Consensus 5 ~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~v 83 (408)
T 3n5f_A 5 ERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDSV 83 (408)
T ss_dssp HHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCCC
T ss_pred HHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCCC
Confidence 7899999999999993 78999999999999999999998754 46999999654 3 6999999999999
Q ss_pred cCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCC------cccHHHHHH-------
Q 020439 118 AMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEG------GGGAKKMLD------- 184 (326)
Q Consensus 118 p~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~------~~G~~~l~~------- 184 (326)
|.+. . .++|+|++++|++++.|++.+.+++++|.|+|+++||+ ..|++.++.
T Consensus 84 ~~~g------------~---~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~ 148 (408)
T 3n5f_A 84 YNGG------------C---FDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEAL 148 (408)
T ss_dssp TTBC------------S---STTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGG
T ss_pred CCCC------------c---cCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHh
Confidence 9642 1 13468999999999999998878999999999999994 258998872
Q ss_pred ----------------ccC----C-----c--cccEEEEecccCC---CCCc-ceeeccccccccceEEEEEEEecCCCc
Q 020439 185 ----------------AGA----L-----E--NVEAIFGLHVSSL---FPVG-TVASRPGPTLAAGGFFEAVINGKGGHA 233 (326)
Q Consensus 185 ----------------~g~----~-----~--~~d~~i~~~~~~~---~~~g-~~~~~~g~~~~G~~~~~i~~~G~~~Hs 233 (326)
.|+ + + ++|+++.+|++++ ++.+ .+.+ ..+++|..+++|+++|+++|+
T Consensus 149 ~~~~~~G~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi--~~~~~g~~~~~i~v~G~~~Ha 226 (408)
T 3n5f_A 149 ECRDAEGISLAEAMKQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGI--VTGIAGLIWVKFTIEGKAEHA 226 (408)
T ss_dssp SCBCTTCCBHHHHHHHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEE--EEEECEEEEEEEEEECCCEET
T ss_pred hccCCCCCCHHHHHHHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEE--EEEeccceEEEEEEEEEcCcC
Confidence 222 1 2 5678898888764 1111 1211 124689999999999999999
Q ss_pred -CCC-CCCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcC-CccccccCeEEEEEEEEccChhhHHHHHHHHHH
Q 020439 234 -AIP-QHTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEE 310 (326)
Q Consensus 234 -s~p-~~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~ 310 (326)
+.| +.|+||+..+++++.+|+.+. +..+ +.+++++.|+|| .+.|+||++|++.+|+|+.|.++.+++.++|++
T Consensus 227 gs~P~~~g~nAi~~aa~~i~~l~~~~-~~~~---~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~ 302 (408)
T 3n5f_A 227 GATPMSLRRDPMAAAAQIIIVIEEEA-RRTG---TTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAV 302 (408)
T ss_dssp TTSCTTTCCCHHHHHHHHHHHHHHHH-HHHS---SCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCccccccCHHHHHHHHHHHHHHHH-HhcC---CcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHH
Confidence 589 589999999999999998875 2222 689999999997 899999999999999999999999999999999
Q ss_pred HHHHHHHHcCCeeee
Q 020439 311 VHLLIVANSNSFYSW 325 (326)
Q Consensus 311 ~~~~~~~~~~~~~~~ 325 (326)
++++++..+++++++
T Consensus 303 ~~~~~a~~~g~~~~i 317 (408)
T 3n5f_A 303 RAETIAKERNVRVTT 317 (408)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhCCeEEE
Confidence 999999999987764
No 25
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=100.00 E-value=9.3e-37 Score=293.70 Aligned_cols=255 Identities=15% Similarity=0.121 Sum_probs=209.7
Q ss_pred HHHHHHHHHh-hhCCCC-----------------CcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC-CCcEEEE
Q 020439 50 YWMVNIRRKI-HENPEL-----------------GFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVAL 110 (326)
Q Consensus 50 ~~~i~~l~~l-~~ips~-----------------s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~I~l 110 (326)
+++++++++| ++|||+ +++|.++++||.++|+++|++++.+ ..+|+++++++. ++|+|+|
T Consensus 32 ~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d-~~gnvia~~~g~~~~~~i~l 110 (474)
T 2v8h_A 32 GRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD-KIGNMFAVYPGKNGGKPTAT 110 (474)
T ss_dssp THHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB-TTCCEEEEECCSSCCSCEEE
T ss_pred HHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe-cCceEEEEECCCCCCCeEEE
Confidence 7899999999 999988 3678999999999999999998864 356899999653 4469999
Q ss_pred EeecCcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecCCCCc------ccHHHHHH
Q 020439 111 RADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEEGG------GGAKKMLD 184 (326)
Q Consensus 111 ~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~------~G~~~l~~ 184 (326)
+|||||||.+ +| | ++|++++++|+|+++|++.+.+++++|.|+|++|||++ .|++.+.+
T Consensus 111 ~~H~DtVp~~---g~----------~--D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~ 175 (474)
T 2v8h_A 111 GSHLDTQPEA---GK----------Y--DGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSH 175 (474)
T ss_dssp EECCCCCSSB---CS----------S--TTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTT
T ss_pred EEecccCCCC---CC----------c--CCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHh
Confidence 9999999986 24 1 55799999999999999988888999999999999952 48888854
Q ss_pred ---------------------------ccCC---------ccccEEEEecccCCCCCcce--eeccccccccceEEEEEE
Q 020439 185 ---------------------------AGAL---------ENVEAIFGLHVSSLFPVGTV--ASRPGPTLAAGGFFEAVI 226 (326)
Q Consensus 185 ---------------------------~g~~---------~~~d~~i~~~~~~~~~~g~~--~~~~g~~~~G~~~~~i~~ 226 (326)
.|+. .++++.+.+|.+++...+.. ......+.+|..+++|++
T Consensus 176 ~~~~~~~~~~~d~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v 255 (474)
T 2v8h_A 176 DLSLEEAYGLMSVGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTV 255 (474)
T ss_dssp SSCHHHHHTCBCSSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEE
T ss_pred ccCHhhhhhhcccccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEE
Confidence 1221 35678888887665221100 011123457999999999
Q ss_pred EecCCCcC-CCC-CCCcHHHHHHHHHHHHhHhhhcccCCCCCceEEEEEEEcC-CccccccCeEEEEEEEEccChhhHHH
Q 020439 227 NGKGGHAA-IPQ-HTIDPIVAASNVIVSLQHLVSREADPLDSQVLTVAKFEGG-GAFNIIPDSVTIGGTFRAFSKESIIQ 303 (326)
Q Consensus 227 ~G~~~Hss-~p~-~g~NAi~~~~~~i~~l~~~~~~~~~~~~~~t~~i~~i~gG-~~~n~iP~~~~~~~diR~~~~~~~~~ 303 (326)
+|+++|+| .|+ .|.|||..+++++..|+.+..+. .++++++.|+|| +..|+||++|++.+|+|++|.++.++
T Consensus 256 ~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~-----~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~ 330 (474)
T 2v8h_A 256 HGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH-----NGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLAT 330 (474)
T ss_dssp ECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT-----TCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHH
T ss_pred EeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc-----CCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHH
Confidence 99999999 597 89999999999999998765432 579999999998 89999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHH---cCCeeee
Q 020439 304 LKQRIEEVHLLIVAN---SNSFYSW 325 (326)
Q Consensus 304 ~~~~i~~~~~~~~~~---~~~~~~~ 325 (326)
+.++|++++++.+.. ++++++|
T Consensus 331 i~~~i~~~~~~~~~~~~~~g~~~~~ 355 (474)
T 2v8h_A 331 MLKEAAAEFDRLIKINDGGALSYES 355 (474)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCEEEE
T ss_pred HHHHHHHHHHHHHhhcccCCcEEEE
Confidence 999999999998777 7777664
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=9.2e-36 Score=286.59 Aligned_cols=269 Identities=14% Similarity=0.093 Sum_probs=204.8
Q ss_pred HHHhhcCchhHHHHHHHHHHhhhCCCCCcch------------HHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCc
Q 020439 39 FLDFAKKPEIFYWMVNIRRKIHENPELGFQE------------FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPP 106 (326)
Q Consensus 39 ~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e------------~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~ 106 (326)
+.+++++++ +++++++++|++|||+|++| .++++|+.++|+++|++++... ..++++.++.+ +|
T Consensus 5 ~~~~~~~~~--~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~~-~~~~~~~~g~~-~~ 80 (470)
T 1lfw_A 5 FKELAEAKK--DAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENFA-NYAGRVNFGAG-DK 80 (470)
T ss_dssp HHHHHHTTH--HHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEET-TTEEEEEECCC-SS
T ss_pred HHHHHHHhH--HHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEec-CeEEEEEeCCC-CC
Confidence 567788877 99999999999999999876 6899999999999999987643 45778877433 58
Q ss_pred EEEEEeecCcccCcCCCCCc---ccC-c-cCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Ccc
Q 020439 107 FVALRADMDALAMEESVEWE---HKS-K-VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGG 177 (326)
Q Consensus 107 ~I~l~~H~DtVp~~~~~~w~---~~~-~-~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~ 177 (326)
+|+|++||||||.++ .|+ |.. + +||++||||+ |++++++|+|+++|++.+.+++++|.|+|++||| ++.
T Consensus 81 ~i~l~~H~D~vp~~~--~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~~i~~i~~~~EE~g~~ 158 (470)
T 1lfw_A 81 RLGIIGHMDVVPAGE--GWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEAGFKPKKKIDFVLGTNEETNWV 158 (470)
T ss_dssp EEEEEEECCBCCCCS--CCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHHTCCCSSEEEEEEESCTTTTCH
T ss_pred eEEEEEeecccCCCC--CccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCcccCCc
Confidence 999999999999875 674 444 3 6999999995 7999999999999999887889999999999999 568
Q ss_pred cHHHHHHccCCcc----ccE----EEEec--------ccCCCC-Ccce---eecccc-----------------------
Q 020439 178 GAKKMLDAGALEN----VEA----IFGLH--------VSSLFP-VGTV---ASRPGP----------------------- 214 (326)
Q Consensus 178 G~~~l~~~g~~~~----~d~----~i~~~--------~~~~~~-~g~~---~~~~g~----------------------- 214 (326)
|++++++++...+ +|. +++.+ ..+. + .|.+ ....|.
T Consensus 159 G~~~~~~~~~~~~~~~~~D~~~~~~~ge~g~~~~~l~~~~~-~~~g~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~ 237 (470)
T 1lfw_A 159 GIDYYLKHEPTPDIVFSPDAEYPIINGEQGIFTLEFSFKND-DTKGDYVLDKFKAGIATNVTPQVTRATISGPDLEAVKL 237 (470)
T ss_dssp HHHHHHHHSCCCSEEEESSEESSEEEEECEEEEEEEEECCC-CCCCSBEEEEEEECSBTTBCCSEEEEEEECSCHHHHHH
T ss_pred cHHHHHHhCcCCcEEEEeCCCceEEEeccceEEEEEEEccC-CcCCCcceeeeecCCcCCcccccceEEecccchHHHHH
Confidence 9999998753211 232 22211 0000 0 0100 000000
Q ss_pred ---------ccccce-----EEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHh------Hhh---hcc-----------
Q 020439 215 ---------TLAAGG-----FFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ------HLV---SRE----------- 260 (326)
Q Consensus 215 ---------~~~G~~-----~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~------~~~---~~~----------- 260 (326)
+.+|.. +++|+++|+++|++.|+.|.||+..+++++..|+ ++. .+.
T Consensus 238 ~~~~~~~~~~~~G~~~~~~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~ 317 (470)
T 1lfw_A 238 AYESFLADKELDGSFEINDESADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLG 317 (470)
T ss_dssp HHHHHHHHHTCEEEEEEETTEEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTT
T ss_pred HHHHHhhhhccccceeecCCcEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccC
Confidence 124544 8999999999999999999999999999998875 211 111
Q ss_pred ---cCC-CCCceEEEEEEEcCCccccccCe-EEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 261 ---ADP-LDSQVLTVAKFEGGGAFNIIPDS-VTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 261 ---~~~-~~~~t~~i~~i~gG~~~n~iP~~-~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
.++ .+..++|++.|++ +|++ |++.+|+|++|.++.+++.++|+++++. +++++|
T Consensus 318 ~~~~~~~~~~~t~~~g~i~~------~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-----g~~v~~ 376 (470)
T 1lfw_A 318 IFHHDDLMGDLASSPSMFDY------EHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-----ILDVTY 376 (470)
T ss_dssp CCCEETTTEECEEEEEEEEE------ETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-----TEEEEC
T ss_pred CcccccccccceEEEEEEEE------cCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-----CeEEEE
Confidence 001 1346888888865 6999 9999999999999999999999998765 566554
No 27
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=100.00 E-value=7.5e-36 Score=288.45 Aligned_cols=244 Identities=17% Similarity=0.187 Sum_probs=193.7
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECC----CCCcEEEEEeecCcccCcCCC--
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGT----GQPPFVALRADMDALAMEESV-- 123 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~----~~~~~I~l~~H~DtVp~~~~~-- 123 (326)
+++++++++|++|||+|++|.++++||.++|+++|++++.+. .+|+++++++ .++|+|+|.+||||||.++..
T Consensus 11 ~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~ 89 (487)
T 2qyv_A 11 KLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTN 89 (487)
T ss_dssp HHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC------
T ss_pred HHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCc
Confidence 889999999999999999999999999999999999987653 5799999964 234899999999999997654
Q ss_pred -CCccc----CccCCeeecCCc------hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccc
Q 020439 124 -EWEHK----SKVPGKMHACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENV 191 (326)
Q Consensus 124 -~w~~~----~~~~g~l~GrG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~ 191 (326)
.|..+ .++||++||||+ |++++++|++++ +.+ .++++|.|+|+++|| ++.|++.+++++ + .+
T Consensus 90 ~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~---~~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~~-~-~~ 163 (487)
T 2qyv_A 90 HNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE---SND-IAHPELEVLLTMTEERGMEGAIGLRPNW-L-RS 163 (487)
T ss_dssp ----CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH---CSS-SCCSSEEEEEESCTTTTCHHHHTCCSSC-C-CC
T ss_pred cccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH---hCC-CCCCCEEEEEEeccccCCHHHHHHHHhc-c-CC
Confidence 68543 246899999998 488999998885 233 477999999999999 568999988765 3 37
Q ss_pred cEEEEecccCCCCCcceeec-cc-------------cccccceEEEEEEEe-cCCCcCCC-CCC-CcHHHHHHHHHHHHh
Q 020439 192 EAIFGLHVSSLFPVGTVASR-PG-------------PTLAAGGFFEAVING-KGGHAAIP-QHT-IDPIVAASNVIVSLQ 254 (326)
Q Consensus 192 d~~i~~~~~~~~~~g~~~~~-~g-------------~~~~G~~~~~i~~~G-~~~Hss~p-~~g-~NAi~~~~~~i~~l~ 254 (326)
|+++..+++ +.+.+.+. .| ..++| .+++|+++| +++||+.| +.| .||+..+++++..|+
T Consensus 164 d~~~~~d~~---~~~~i~~g~~g~~~~~~~~~~~~~~~~~g-~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~ 239 (487)
T 2qyv_A 164 EILINTDTE---ENGEIYIGCAGGENADLELPIEYQVNNFE-HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQ 239 (487)
T ss_dssp SEEEECCCC---CTTEEEEEECEEEEEEEEEECCEEECCCS-EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHH
T ss_pred CEEEEEccC---CCCeEEEeccCCcceeeeccccccccCCC-eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHh
Confidence 777764332 22333221 01 13456 889999999 89999976 776 799999999999998
Q ss_pred HhhhcccCCCCCceEEEEEEEcCCccccccCeEEEEEEE----------------------------------------E
Q 020439 255 HLVSREADPLDSQVLTVAKFEGGGAFNIIPDSVTIGGTF----------------------------------------R 294 (326)
Q Consensus 255 ~~~~~~~~~~~~~t~~i~~i~gG~~~n~iP~~~~~~~di----------------------------------------R 294 (326)
.+. ...+++++.|+||...|+||++|++.+++ |
T Consensus 240 ~~~-------~~~~~~v~~i~gG~~~NvIP~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 312 (487)
T 2qyv_A 240 QNQ-------PHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQ 312 (487)
T ss_dssp HHC-------TTCCEEEEEEEEESCTTBCCCCEEEEEEECSCHHHHHHHHHHHHHHHHHHTTTTCTTCEEEEEECCCCSE
T ss_pred hcc-------CCCcEEEEEEeCCCcCcccCCceEEEEEecCCHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecccccc
Confidence 762 13689999999999999999999999999 8
Q ss_pred ccChhhHHHHHHHHHHH
Q 020439 295 AFSKESIIQLKQRIEEV 311 (326)
Q Consensus 295 ~~~~~~~~~~~~~i~~~ 311 (326)
+.|.++.+.+.+.|+++
T Consensus 313 ~~~~~~~~~i~~~i~~~ 329 (487)
T 2qyv_A 313 VFSSQCTKNIIHCLNVL 329 (487)
T ss_dssp EECHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHHhC
Confidence 99999998888877765
No 28
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.96 E-value=2.1e-28 Score=208.73 Aligned_cols=170 Identities=15% Similarity=0.116 Sum_probs=134.5
Q ss_pred HHHHHHHHHhhhCCCCCc--chHHHHHHHHHHHhhcCCCeeecc---cCceEEEEECCC-C-CcEEEEEeecCcccCcCC
Q 020439 50 YWMVNIRRKIHENPELGF--QEFETSKLIRAELDQMGIPYKFPV---AVTGVVGYIGTG-Q-PPFVALRADMDALAMEES 122 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~--~e~~~~~~l~~~l~~~G~~~~~~~---~~~nvia~~~~~-~-~~~I~l~~H~DtVp~~~~ 122 (326)
+++++++++|++|||+|+ +|.++++|+.++|+++|++++... +++|+++++++. + +|+|+|+|||||||.++
T Consensus 10 ~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~- 88 (198)
T 1q7l_A 10 HPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK- 88 (198)
T ss_dssp CHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG-
T ss_pred HHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc-
Confidence 678999999999999998 689999999999999999987643 567999998653 2 48999999999999865
Q ss_pred CCCccc---Cc--cCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-C-cccHHHHHHccCCc--c
Q 020439 123 VEWEHK---SK--VPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-G-GGGAKKMLDAGALE--N 190 (326)
Q Consensus 123 ~~w~~~---~~--~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~-~~G~~~l~~~g~~~--~ 190 (326)
..|.++ .. +||++||||+ |++++++|+|+++|++.+.+++++|.|+|++||| + ..|++++++++.+. +
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~ 168 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEGHRFPRTIHMTFVPDEEVGGHQGMELFVQRPEFHALR 168 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCGGGTSTTTHHHHTTSHHHHTTC
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcccccCccccHHHHHHhHHhccCC
Confidence 367543 22 5899999996 7999999999999999887889999999999999 5 38999998764322 3
Q ss_pred ccEEEEecccCCCCCcceeeccccccccceEEEE
Q 020439 191 VEAIFGLHVSSLFPVGTVASRPGPTLAAGGFFEA 224 (326)
Q Consensus 191 ~d~~i~~~~~~~~~~g~~~~~~g~~~~G~~~~~i 224 (326)
+|+++ +....+|++...+ ..+++|..|++|
T Consensus 169 ~~~~i--d~g~~ept~~~~v--~~~~kG~~~~~v 198 (198)
T 1q7l_A 169 AGFAL--DEGIANPTDAFTV--FYSERSPWWVRV 198 (198)
T ss_dssp EEEEE--ECCCCCSSSSEEE--EECCSSCGGGCC
T ss_pred cCEEE--ecCccCCCCCceE--EEEccEEEEEEC
Confidence 45555 2334567764333 346788887653
No 29
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.95 E-value=1.4e-26 Score=206.84 Aligned_cols=149 Identities=17% Similarity=0.266 Sum_probs=126.1
Q ss_pred HHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeec--ccCceEEEEECCCCCcEEEEEeecCcccCcCCCCCc
Q 020439 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWE 126 (326)
Q Consensus 49 ~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~I~l~~H~DtVp~~~~~~w~ 126 (326)
.+++++++++|++|||+|++|.++++||.++|+++||+++.. .+++|++++++. ++|+|+|+|||||||.++.+.|+
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~ 83 (269)
T 4h2k_A 5 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQWS 83 (269)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeCC-CCCEEEEEeeecccCCCCccccc
Confidence 478999999999999999999999999999999999998763 356899999843 35899999999999998877896
Q ss_pred cc----CccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cc-ccHHHHHHcc--CCccccEEE
Q 020439 127 HK----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIF 195 (326)
Q Consensus 127 ~~----~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~-~G~~~l~~~g--~~~~~d~~i 195 (326)
.+ .+++|++||||+ |++++++++|++.|++.+.+++++|.|+|++||| ++ .|++.+++.. ...++|+++
T Consensus 84 ~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i 163 (269)
T 4h2k_A 84 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 163 (269)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhCCCCCccEEEEEEeccccCcccCHHHHHHHHHhcCCCCCEEE
Confidence 43 356899999997 7999999999999988777788999999999999 44 3999988642 123567777
Q ss_pred Eec
Q 020439 196 GLH 198 (326)
Q Consensus 196 ~~~ 198 (326)
..+
T Consensus 164 ~~E 166 (269)
T 4h2k_A 164 VGE 166 (269)
T ss_dssp ECC
T ss_pred EEC
Confidence 654
No 30
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.94 E-value=2.9e-26 Score=204.55 Aligned_cols=148 Identities=14% Similarity=0.213 Sum_probs=124.6
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeec--ccCceEEEEECCCCCcEEEEEeecCcccCcCCCCCcc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFP--VAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEH 127 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~--~~~~nvia~~~~~~~~~I~l~~H~DtVp~~~~~~w~~ 127 (326)
+++++++++|++|||+|++|.++++||.++|+++|++++.. .+++|++++++. ++|+|+|+|||||||.++.+.|+.
T Consensus 6 ~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~~ 84 (268)
T 3t68_A 6 SPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT-QSPLFVFAGHTDVVPAGPLSQWHT 84 (268)
T ss_dssp CHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEECS-SSCEEEEEEECCBCCCCCGGGCSS
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeCC-CCCeEEEEccccccCCCCcccCCC
Confidence 67999999999999999999999999999999999988753 346899999843 358999999999999988778954
Q ss_pred c----CccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cc-ccHHHHHHcc--CCccccEEEE
Q 020439 128 K----SKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-GGAKKMLDAG--ALENVEAIFG 196 (326)
Q Consensus 128 ~----~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~-~G~~~l~~~g--~~~~~d~~i~ 196 (326)
+ .+++|++||||+ |++++++++|++.|++.+.+++++|.|+|++||| ++ .|++++++.. ...++|+++.
T Consensus 85 ~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~~~~~d~~i~ 164 (268)
T 3t68_A 85 PPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEHPDHQGSIGFLITSDEEGPFINGTVRVVETLMARNELIDMCIV 164 (268)
T ss_dssp CTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCTTSSSCCHHHHHHHHHHHTTCCCCEEEE
T ss_pred CCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhCCCCCCcEEEEEEeCCccCcccCHHHHHHHHHhcCCCCCEEEE
Confidence 3 467999999997 7999999999999988777788999999999999 44 4999988742 1235777776
Q ss_pred ec
Q 020439 197 LH 198 (326)
Q Consensus 197 ~~ 198 (326)
.+
T Consensus 165 ~e 166 (268)
T 3t68_A 165 GE 166 (268)
T ss_dssp CS
T ss_pred eC
Confidence 53
No 31
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.83 E-value=7.3e-21 Score=175.29 Aligned_cols=161 Identities=10% Similarity=0.068 Sum_probs=118.2
Q ss_pred HHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC-CCcEEEEEeecCcccCc-------------
Q 020439 55 IRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAME------------- 120 (326)
Q Consensus 55 ~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~I~l~~H~DtVp~~------------- 120 (326)
++++|+++||+|++|.++++++.++|+++|++++.+ ..+|+++.+.+. .+|+|+|.|||||||.-
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~v~l~aH~D~v~~~v~~i~~~G~l~~~ 81 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTD-VLGNLIALKRGRDSSKKLLVSAHMDEVGFVVSKIEKDGKVSFL 81 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTSCEEEE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-CCCcEEEEecCCCCCceEEEEeccCcCcEEEEEECCCCEEEEE
Confidence 578999999999999999999999999999998865 356999988654 34899999999999920
Q ss_pred CCCCCccc---C------------------------------------------------cc-C-------------Cee
Q 020439 121 ESVEWEHK---S------------------------------------------------KV-P-------------GKM 135 (326)
Q Consensus 121 ~~~~w~~~---~------------------------------------------------~~-~-------------g~l 135 (326)
...+|..+ . ++ + |++
T Consensus 82 ~~Gg~~~~~~~~~~v~v~~~~g~i~~~~~h~~~~~~~~~~~~~~l~id~g~~s~~e~~~~i~~gd~v~~~~~~~~~~~~i 161 (340)
T 2fvg_A 82 PVGGVDPRILPGKVVQVKNLKGVIGYRPIHLQRDEENTPPRFENLRIDFGFSSADEAKKYVSIGDYVSFVSDYIEKNGRA 161 (340)
T ss_dssp EESCCCGGGCTTCEEEETTEEEEEEECC-----------CCSTTEEEECSCSSHHHHHTTCCTTCEEEECCCCEEETTEE
T ss_pred eeCCcccccccCCEEEECcEEEEEcCCCccccchhhccCCCcccEEEEeCCCCHHHHHhhCCCCCEEEEccCceeecCEE
Confidence 01135322 1 22 4 899
Q ss_pred ecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecccCCCCCcceeecc
Q 020439 136 HACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTVASRP 212 (326)
Q Consensus 136 ~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~~~~~ 212 (326)
|||.. |++++++|+|++.++ +++++|.|+|+++|| |+.|++++.+. ...|+++..++. ..
T Consensus 162 ~gra~D~k~g~a~~l~a~~~l~----~~~~~i~~~~~~~EE~G~~G~~~~~~~---~~~~~~i~~d~~-----~~----- 224 (340)
T 2fvg_A 162 VGKAFDDRAGCSVLIDVLESGV----SPAYDTYFVFTVQEETGLRGSAVVVEQ---LKPTCAIVVETT-----TA----- 224 (340)
T ss_dssp EESCHHHHHHHHHHHHHHHTCC----CCSEEEEEEEECCCC-----CHHHHHH---HCCSEEEEEEEE-----EE-----
T ss_pred eeccCccHHHHHHHHHHHHHhh----ccCCcEEEEEEcccccchhhhHHHhhc---cCCCEEEEEecc-----cC-----
Confidence 99943 799999999999886 478999999999999 77899988763 135666653211 00
Q ss_pred ccccccceEEEEEEEecCCCcCCCCCCCcHHH
Q 020439 213 GPTLAAGGFFEAVINGKGGHAAIPQHTIDPIV 244 (326)
Q Consensus 213 g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~ 244 (326)
+ ++.|+++|++.|+.|.|++.
T Consensus 225 -----~------~~~G~~~h~~~~~~G~g~~i 245 (340)
T 2fvg_A 225 -----G------DNPELEERKWATHLGDGPAI 245 (340)
T ss_dssp -----C------SCSTTCCSSSSCCTTSCCEE
T ss_pred -----C------CCCCCccccCCcccCCCcEE
Confidence 0 34677788888888777643
No 32
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.80 E-value=2.8e-19 Score=165.20 Aligned_cols=140 Identities=16% Similarity=0.164 Sum_probs=111.3
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC-CCcEEEEEeecCcc-----------
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDAL----------- 117 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~I~l~~H~DtV----------- 117 (326)
+++++++++|++|||+|++|.++++|+.++|+++|++++.+ ..+|+++++++. .+|+|+|+||+|||
T Consensus 6 ~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv~~~v~~i~~~G 84 (349)
T 2gre_A 6 KETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTLGAMVKEIKPDG 84 (349)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBCEEEEEEECTTS
T ss_pred HHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEecccccceeEEEECCCC
Confidence 78999999999999999999999999999999999998765 467999998654 34899999999999
Q ss_pred -----cCcCCCCCcccC---------------------------------------------------------------
Q 020439 118 -----AMEESVEWEHKS--------------------------------------------------------------- 129 (326)
Q Consensus 118 -----p~~~~~~w~~~~--------------------------------------------------------------- 129 (326)
|.|. |...+
T Consensus 85 ~l~~~~~Gg---~~~~~~~~~~v~i~~~~g~~~~g~i~~~~~~~h~~~~~~~~~~~~~~l~~~id~g~~~~~~~~~~gi~ 161 (349)
T 2gre_A 85 RLSLSMIGG---FRWNSVEGEYCEIETSSGKTYTGTILMHQTSVHVYKDAGEAKRDEKNIEVRIDERVFSADEVRELGIE 161 (349)
T ss_dssp CEEEEEESS---CCGGGTTTCEEEEECTTSCEEEEEEECC-------------------CEEEESSCCCSHHHHHHTTCC
T ss_pred eEEEEecCC---CccccccCcEEEEEcCCCCEEEEEEeCCCCCccccchhccCCCCHHHceEEeccCCCCHHHHHHcCCC
Confidence 4332 32100
Q ss_pred -------------ccCCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccE
Q 020439 130 -------------KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEA 193 (326)
Q Consensus 130 -------------~~~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~ 193 (326)
..+|++|||+. |++++++|+|++.|++.+.+++++|.|+|+++|| |+.|++++ ...+++
T Consensus 162 ~gd~v~~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~G~~g~~~~-----~~~~~~ 236 (349)
T 2gre_A 162 VGDFVSFDPRVQITESGYIKSRHLDDKVSVAILLKLIKRLQDENVTLPYTTHFLISNNEEIGYGGNSNI-----PEETVE 236 (349)
T ss_dssp TTCEEEECCCCEECTTSEEEESCCTTHHHHHHHHHHHHHHHHHTCCCSEEEEEEEESCC----CCCCCC-----CTTEEE
T ss_pred CCCEEEEccccEEccCCeEEEeeccchHHHHHHHHHHHHHHhccCCCCceEEEEEECcccCCchhhccc-----ccCCCE
Confidence 13578999975 7999999999999998777788999999999999 77888865 124566
Q ss_pred EEEec
Q 020439 194 IFGLH 198 (326)
Q Consensus 194 ~i~~~ 198 (326)
++..+
T Consensus 237 ~i~~D 241 (349)
T 2gre_A 237 YLAVD 241 (349)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 66654
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.78 E-value=2.7e-18 Score=160.06 Aligned_cols=144 Identities=13% Similarity=0.111 Sum_probs=113.2
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC-CCcEEEEEeecCcccC---------
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG-QPPFVALRADMDALAM--------- 119 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~-~~~~I~l~~H~DtVp~--------- 119 (326)
+++++++++|+++||+|++|.+++++|.++|+++|++++.+ ..+|+++++.+. ..|+|+|.|||||||.
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~~~v~~i~~~G 85 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVGFMVTQITDKG 85 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCEEEEEEECTTS
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCCEEEEEECCCC
Confidence 57899999999999999999999999999999999998765 467999987543 4589999999999982
Q ss_pred -------cC---------------CC-------CCccc----C----------------------------c--------
Q 020439 120 -------EE---------------SV-------EWEHK----S----------------------------K-------- 130 (326)
Q Consensus 120 -------~~---------------~~-------~w~~~----~----------------------------~-------- 130 (326)
+. .+ .|..+ . +
T Consensus 86 ~l~~~~~Gg~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~s~~~~~~~gi~~Gd~v~~ 165 (373)
T 1vhe_A 86 FIRFQTVGGWWAQVMLAQRVTIVTKKGEITGVIGSKPPHILSPEARKKSVEIKDMFIDIGASSREEALEWGVLPGDMIVP 165 (373)
T ss_dssp CEEEEEESCCCGGGTTTCEEEEEETTEEEEEEEECCCGGGSCTTTTTSCCCGGGCEEECSCSSHHHHHHTTCCTTCEEEE
T ss_pred eEEEEEeCCcchhhccCCEEEEEeCCCcEEEEEcCCCcccCchhhccCCCChhHeEEEecCCCHHHHHHcCCCCCCEEEE
Confidence 10 00 02200 0 1
Q ss_pred --------cCCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecc
Q 020439 131 --------VPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (326)
Q Consensus 131 --------~~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~ 199 (326)
++|++|||+. |++++++|+|++.|++.+ ++++|.|+|+++|| |+.|++.+... . ..|+++..++
T Consensus 166 ~~~~~~~~~~~~i~gr~~D~k~g~a~~l~a~~~l~~~~--~~~~v~~~~~~~EE~G~~G~~~~~~~-~--~~d~~i~~d~ 240 (373)
T 1vhe_A 166 HFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNTD--HPNIVYGVGTVQEEVGLRGAKTAAHT-I--QPDIAFGVDV 240 (373)
T ss_dssp CCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTSC--CSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEEE
T ss_pred ccccEEecCCCeEEeccCccHHHHHHHHHHHHHHhhcC--CCceEEEEEECCcccChhhHHHHhcc-c--CCCEEEEEec
Confidence 1689999976 799999999999998764 67999999999999 77899988542 2 3567666543
No 34
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.78 E-value=1.3e-18 Score=156.27 Aligned_cols=131 Identities=13% Similarity=0.086 Sum_probs=108.8
Q ss_pred HHHHHHHHHhhhCCCCCc--------chHHHHHHHHHHHhhcCCCeeeccc------CceEEEEECCC-CCcEEEEEeec
Q 020439 50 YWMVNIRRKIHENPELGF--------QEFETSKLIRAELDQMGIPYKFPVA------VTGVVGYIGTG-QPPFVALRADM 114 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~--------~e~~~~~~l~~~l~~~G~~~~~~~~------~~nvia~~~~~-~~~~I~l~~H~ 114 (326)
+++++++++|++|||+|+ .|.++++||.++|+++|++++.+.. ..|+++++++. ++++|+|.+|+
T Consensus 7 ~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH~ 86 (284)
T 1tkj_A 7 ANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAHL 86 (284)
T ss_dssp HHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEeec
Confidence 789999999999999986 6789999999999999999876422 46999999664 34789999999
Q ss_pred CcccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCC--
Q 020439 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGAL-- 188 (326)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~-- 188 (326)
||||. |||+ |+|++++|++++.|++.+.+++++|.|+|+++|| |..|+++++++...
T Consensus 87 D~v~~-----------------g~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~ 149 (284)
T 1tkj_A 87 DSVSS-----------------GAGINDNGSGSAAVLETALAVSRAGYQPDKHLRFAWWGAEELGLIGSKFYVNNLPSAD 149 (284)
T ss_dssp CCCTT-----------------SCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHSCHHH
T ss_pred CCCCC-----------------CCCCccChHHHHHHHHHHHHHHhcCCCCCceEEEEEECCcccCCcCHHHHHhhCccch
Confidence 99985 3454 7999999999999998877889999999999999 67899999886321
Q ss_pred -ccccEEEEe
Q 020439 189 -ENVEAIFGL 197 (326)
Q Consensus 189 -~~~d~~i~~ 197 (326)
.++++++.+
T Consensus 150 ~~~~~~~i~~ 159 (284)
T 1tkj_A 150 RSKLAGYLNF 159 (284)
T ss_dssp HTTEEEEEEE
T ss_pred hhcEEEEEEe
Confidence 234555544
No 35
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.77 E-value=2.3e-18 Score=158.08 Aligned_cols=137 Identities=21% Similarity=0.268 Sum_probs=110.9
Q ss_pred HHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCccc-------------
Q 020439 52 MVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------- 118 (326)
Q Consensus 52 ~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtVp------------- 118 (326)
+++++++|+++||+|++|.++++++.++|+++|+ ++. +..+|++++++++ +|+|+|.||+|||+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~-d~~gnlia~~~~~-~~~i~l~aH~D~v~~~v~~i~~~G~l~ 80 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKV-DAIGNLIVELGEG-EERILFMAHMDEIGLLITGITDEGKLR 80 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEE-CTTCCEEEEEESS-SEEEEEEEECCBCEEEEEEECTTSCEE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEE-cCCCeEEEEecCC-CceEEEEeccCcccEEEEEECCCCeEE
Confidence 6789999999999999999999999999999999 765 4678999988653 48999999999994
Q ss_pred ---CcCCCCCc---------------------------------------------------------------------
Q 020439 119 ---MEESVEWE--------------------------------------------------------------------- 126 (326)
Q Consensus 119 ---~~~~~~w~--------------------------------------------------------------------- 126 (326)
.+. |.
T Consensus 81 ~~~~Gg---~~~~~~~~~~v~v~~~~g~~~g~i~~~~~h~~~~~~~~~~~~~~~~id~g~~~~~~~~~~i~~Gd~~~~~~ 157 (332)
T 2wyr_A 81 FRKVGG---IDDRLLYGRHVNVVTEKGILDGVIGATPPHLSLERDKSVIPWYDLVIDIGAESKEEALELVKPLDFAVFKK 157 (332)
T ss_dssp EEEESC---CCGGGTTTEEEEEECSSCEEEEEECCCCTTC-----CCCCCGGGCCBBCSCSSHHHHHHHCCTTCEEEECC
T ss_pred EEecCC---cChhhccCCEEEEEcCCCCEEEEEcCCCcccChhhhccCCChHHEEEEeCCCCHHHHHhhCCCCCEEEEcc
Confidence 442 21
Q ss_pred -ccCccCCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecc
Q 020439 127 -HKSKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (326)
Q Consensus 127 -~~~~~~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~ 199 (326)
+....+|++|||.. |++++++|+|++.|++.+ ++++|.|+|+++|| |+.|++++.+. + ..|+++..+.
T Consensus 158 ~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~~~--~~~~i~~~~~~~EE~G~~G~~~~~~~--~-~~~~~i~~d~ 229 (332)
T 2wyr_A 158 HFSVLNGKYVSTRGLDDRFGVVALIEAIKDLVDHE--LEGKVIFAFTVQEEVGLKGAKFLANH--Y-YPQYAFAIDS 229 (332)
T ss_dssp CCEEETTTEEECTTHHHHHHHHHHHHHHHTTTTSC--CSSEEEEEEESCGGGTSHHHHHHTTT--C-CCSEEEEECC
T ss_pred ccEEecCCeEEcccCCcHHHHHHHHHHHHHHhhcC--CCceEEEEEECccccCcchHHHHhcc--c-CCCEEEEEec
Confidence 11124789999943 799999999999998764 67999999999999 77899988642 2 4677776543
No 36
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.76 E-value=6.1e-18 Score=152.95 Aligned_cols=127 Identities=15% Similarity=0.163 Sum_probs=106.2
Q ss_pred HHHHHHHHHhhhCCC---CCcchHHHHHHHHHHHhhcCC--C-eeecc------cCceEEEEECCC--CCcEEEEEeecC
Q 020439 50 YWMVNIRRKIHENPE---LGFQEFETSKLIRAELDQMGI--P-YKFPV------AVTGVVGYIGTG--QPPFVALRADMD 115 (326)
Q Consensus 50 ~~~i~~l~~l~~ips---~s~~e~~~~~~l~~~l~~~G~--~-~~~~~------~~~nvia~~~~~--~~~~I~l~~H~D 115 (326)
+++++++++|+++|+ .|+.+.++++||.++|+++|+ + ++.+. ..+|+++++++. +.+.|+|.+|+|
T Consensus 20 ~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~D 99 (299)
T 1rtq_A 20 SQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHLD 99 (299)
T ss_dssp HHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEeccc
Confidence 889999999999994 466788999999999999874 3 33221 247999999654 247899999999
Q ss_pred cccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHc
Q 020439 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (326)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~ 185 (326)
|||. .|.. +.+||||+ |+|++++|++++.|++.+.+++++|.|+++++|| |..|+++++++
T Consensus 100 ~v~~----~~~~-----~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 164 (299)
T 1rtq_A 100 STIG----SHTN-----EQSVAPGADDDASGIAAVTEVIRVLSENNFQPKRSIAFMAYAAEEVGLRGSQDLANQ 164 (299)
T ss_dssp CCSS----TTCC-----TTCCCCCTTTTHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHH
T ss_pred cCCC----cCcC-----CCcccCCCcccHHHHHHHHHHHHHHHHcCCCCCceEEEEEECCccCCchhHHHHHHh
Confidence 9983 4653 56899998 7999999999999998877889999999999999 77899999875
No 37
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.71 E-value=5.2e-21 Score=174.20 Aligned_cols=186 Identities=11% Similarity=-0.011 Sum_probs=110.1
Q ss_pred HHHHHHhhhCCCCCcchH-HHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCcccCcCCCCCcccCcc
Q 020439 53 VNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAMEESVEWEHKSKV 131 (326)
Q Consensus 53 i~~l~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtVp~~~~~~w~~~~~~ 131 (326)
+++|++|++|||+|++|. ++++||+++|+++|++++++ ..+|++++++++ +|+|+|.|||||||...... ..
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D-~~GNlia~~~g~-~p~lll~~H~Dtvp~~v~~~-----~~ 84 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGS-SPRIMVAAHMDKIGVMVNHI-----DK 84 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEEC-TTCCEEEEECCS-SSEEEEEEECCBCEEEEEEE-----CT
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEe-CCCeEEEEECCC-CceEEEEeccccCCCcCCee-----ec
Confidence 478999999999999885 68999999999999999865 457999999875 48999999999999653221 24
Q ss_pred CCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecccCCCCCcce
Q 020439 132 PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVSSLFPVGTV 208 (326)
Q Consensus 132 ~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~~~~~~~g~~ 208 (326)
+|.+++++. +.+.+++..++..+...+ .+...+.++++.+|| +..|.+.+..+.......+.... .....
T Consensus 85 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ee~~~~~~~~~~~~~~~~~~g~~~~~-----~~~~~- 157 (354)
T 2wzn_A 85 DGYLHIVPIGGVLPETLVAQRIRFFTEKG-ERYGVVGVLPPHLRRGQEDKGSKIDWDQIVVDVGASSKE-----EAEEM- 157 (354)
T ss_dssp TSCEEEEEESSCCGGGGTTCEEEEEETTE-EEEEEECCCCGGGC---------CCGGGCCEECSCSSHH-----HHHHT-
T ss_pred CCceeeccCCCccHHHHHHHHHHHhhccC-CccceEEEeeeeeEecccccccchhhhhhhhhhcccchh-----hhhcc-
Confidence 577776554 222222322332232322 456778888899999 55666665433222111111100 00000
Q ss_pred eeccccccccceEEEEEEEecCCCcCCCCCCCcHHHHHHHHHHHHh
Q 020439 209 ASRPGPTLAAGGFFEAVINGKGGHAAIPQHTIDPIVAASNVIVSLQ 254 (326)
Q Consensus 209 ~~~~g~~~~G~~~~~i~~~G~~~Hss~p~~g~NAi~~~~~~i~~l~ 254 (326)
.. .....+......++.+...|++.+..+.+++..+..++.++.
T Consensus 158 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 201 (354)
T 2wzn_A 158 GF--RVGTVGEFAPNFTRLNEHRFATPYLDDRICLYAMIEAARQLG 201 (354)
T ss_dssp TC--CTTCEEEECCCCEECSSSEEECTTHHHHHHHHHHHHHHHHCC
T ss_pred cc--ccceeeeeeeeeEeecccccccccccccchhhhHHHHHHHHH
Confidence 00 111234455566677777787776555555555555555543
No 38
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.71 E-value=7.3e-17 Score=149.23 Aligned_cols=136 Identities=20% Similarity=0.196 Sum_probs=107.7
Q ss_pred HHHHHHHhhhCCCCCcch-HHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCccc------------
Q 020439 52 MVNIRRKIHENPELGFQE-FETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA------------ 118 (326)
Q Consensus 52 ~i~~l~~l~~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtVp------------ 118 (326)
+++++++|+++||+|++| .++++++.++|+++|++++.+ ..+|+++.++++ +|+|+|.||+|||+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~~~v~~i~~~G~l 85 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIGLMVTHIEKNGFL 85 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCEEEEEEECTTSCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCcccEEEEEECCCceE
Confidence 568899999999999999 999999999999999998765 467999998655 58999999999995
Q ss_pred ----CcCCCCCccc------------------------------------------------------------------
Q 020439 119 ----MEESVEWEHK------------------------------------------------------------------ 128 (326)
Q Consensus 119 ----~~~~~~w~~~------------------------------------------------------------------ 128 (326)
.|. |...
T Consensus 86 ~~~~~Gg---~~~~~~~~~~v~v~~~~g~~~~g~i~~~~~h~~~~~~~~~~~~~~~l~~d~g~~~~~~~~~~gi~~Gd~v 162 (353)
T 1y0y_A 86 RVAPIGG---VDPKTLIAQRFKVWIDKGKFIYGVGASVPPHIQKPEDRKKAPDWDQIFIDIGAESKEEAEDMGVKIGTVI 162 (353)
T ss_dssp EEEEESS---CCGGGTTTCEEEEEEETTEEEEEEEEC-------------CCCGGGCEEECSCSSHHHHHHTTCCTTCEE
T ss_pred EEEEeCC---cchhhccCCEEEEEeCCCcEEEEEEeCCCcccCchhhccCCCChHHeEEEeCCCCHHHHHHcCCCCCCEE
Confidence 332 1100
Q ss_pred -------CccCCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEec
Q 020439 129 -------SKVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLH 198 (326)
Q Consensus 129 -------~~~~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~ 198 (326)
...++++|||.. |++++++|++++.|++ ++++|.|+|+++|| |+.|++++... . ..|+++..+
T Consensus 163 ~~~~~~~~~~~~~i~gra~D~k~g~a~~l~a~~~l~~----~~~~i~~~~~~~EE~g~~G~~~~~~~-~--~~~~~i~~d 235 (353)
T 1y0y_A 163 TWDGRLERLGKHRFVSIAFDDRIAVYTILEVAKQLKD----AKADVYFVATVQEEVGLRGARTSAFG-I--EPDYGFAID 235 (353)
T ss_dssp EECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHCCS----CSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEEE
T ss_pred EeccCcEEecCCeEEeccCccHHHHHHHHHHHHHhhc----CCCeEEEEEECCcccchhHHHHHhhc-c--CCCEEEEEe
Confidence 001467888854 7999999999998865 67899999999999 77899988642 1 356666654
Q ss_pred c
Q 020439 199 V 199 (326)
Q Consensus 199 ~ 199 (326)
+
T Consensus 236 ~ 236 (353)
T 1y0y_A 236 V 236 (353)
T ss_dssp E
T ss_pred c
Confidence 3
No 39
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.70 E-value=2.8e-16 Score=142.29 Aligned_cols=131 Identities=15% Similarity=0.046 Sum_probs=106.3
Q ss_pred HHHHHHHHHhhhCCC---CCcchHHHHHHHHHHHhhcCCCeeecc-----------cCceEEEEECCCCCcEEEEEeecC
Q 020439 50 YWMVNIRRKIHENPE---LGFQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (326)
Q Consensus 50 ~~~i~~l~~l~~ips---~s~~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~I~l~~H~D 115 (326)
+++.+.+++|+++.+ .|..+.++++||.++|+++|++++.+. ...|+++++++.+.+.|++.+|+|
T Consensus 25 ~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 104 (309)
T 3tc8_A 25 DSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEeccc
Confidence 777888888877643 355678999999999999999987532 137999999876558999999999
Q ss_pred cccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cc-------------cc
Q 020439 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG-------------GG 178 (326)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~-------------~G 178 (326)
|||.++.+ ++. .++|++| +|+ ++|+|++|++++.|++.+ ++++|.|+++.+|| |. .|
T Consensus 105 sv~~~~~~--p~~-~~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~--~~~~i~f~~~~~EE~Gl~~~~~~~~~ds~~~G 178 (309)
T 3tc8_A 105 SRPYSDHD--PDP-SKHRTPL-DGADDGGSGVGALLEIARQIGQKA--PGIGIDIIFFDAEDYGTPEFVTDYTPDSWCLG 178 (309)
T ss_dssp CCSCCTTC--SSG-GGTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCSCSCCTTCCSCCTTCSCHH
T ss_pred CCCCCCCC--ccc-cCCCccc-cCcccchHhHHHHHHHHHHHHhCC--CCCcEEEEEECccccccccccccccccccchh
Confidence 99976422 222 4567777 887 589999999999998874 88999999999999 66 89
Q ss_pred HHHHHHcc
Q 020439 179 AKKMLDAG 186 (326)
Q Consensus 179 ~~~l~~~g 186 (326)
+++++++.
T Consensus 179 S~~~~~~~ 186 (309)
T 3tc8_A 179 TQFWAKNP 186 (309)
T ss_dssp HHHHHHSC
T ss_pred HHHHHhCC
Confidence 99998864
No 40
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.67 E-value=6.2e-16 Score=140.15 Aligned_cols=131 Identities=15% Similarity=0.085 Sum_probs=95.9
Q ss_pred HHHHHHHHHhhhCCCC---CcchHHHHHHHHHHHhhcCCCeeecc-----------cCceEEEEECCCCCcEEEEEeecC
Q 020439 50 YWMVNIRRKIHENPEL---GFQEFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMD 115 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~---s~~e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~I~l~~H~D 115 (326)
+++.+++++|+++++. |..+.++++||.++|+++|++++.+. ...||++++++...+.|++.+|+|
T Consensus 27 ~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~D 106 (314)
T 3gux_A 27 DSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHWD 106 (314)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEcccc
Confidence 7889999999988643 45678999999999999999986532 137999999776558999999999
Q ss_pred cccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cc--------------c
Q 020439 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (326)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~--------------~ 177 (326)
|||.++.+ ++ ...++. +++|+ ++|+|++|++++.|.+.+ ++++|.|++..+|| |. .
T Consensus 107 sv~~~~~~--p~-~~~~~~-~~~GA~D~~sGva~~Le~ar~l~~~~--~~~~i~fv~~~~EE~Gl~~~~~~~~~~ds~~~ 180 (314)
T 3gux_A 107 SRPYADND--PD-PKNHHT-PILGVNDGASGVGVLLEIARQIQKEQ--PALGIDIVFFDSEDYGIPEFYDGKYKQDTWCL 180 (314)
T ss_dssp CCC------------------------CHHHHHHHHHHHHHHHHSC--CSSEEEEEEECSCCC-----------CTTSCH
T ss_pred CCCcCCCC--cc-cccCCc-ccCCCcccHHHHHHHHHHHHHHHhCC--CCCcEEEEEECCccccccccccccccccccch
Confidence 99976421 11 122334 45887 699999999999998864 88999999999999 66 8
Q ss_pred cHHHHHHcc
Q 020439 178 GAKKMLDAG 186 (326)
Q Consensus 178 G~~~l~~~g 186 (326)
|+++++++.
T Consensus 181 GS~~~~~~~ 189 (314)
T 3gux_A 181 GSQYWARTP 189 (314)
T ss_dssp HHHHHHHSC
T ss_pred hHHHHHhCC
Confidence 999998864
No 41
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.65 E-value=9.1e-16 Score=141.45 Aligned_cols=141 Identities=17% Similarity=0.138 Sum_probs=106.6
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCccc-----------
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALA----------- 118 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtVp----------- 118 (326)
.++++++++|+++||+|++|.++++++.++|+++|++++.+ ..+|+++.+.+.+.|.|+|.||+|||+
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~~~v~~i~~G~l 83 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIGFVVSKVEGQFA 83 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCCEEEEEEETTEE
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccceEeEEecCCeE
Confidence 45788999999999999999999999999999999998765 467999998654348999999999995
Q ss_pred ----CcCCCCCcccC-----------------------------------------------------------------
Q 020439 119 ----MEESVEWEHKS----------------------------------------------------------------- 129 (326)
Q Consensus 119 ----~~~~~~w~~~~----------------------------------------------------------------- 129 (326)
.+ .|....
T Consensus 84 ~~~~~G---g~~~~~~~g~~~~~~~~~g~~~G~i~~~~~h~~~~~~~~~~~~~~~l~id~g~~~eei~~G~~~~~~~~~~ 160 (346)
T 1vho_A 84 RLEPVG---GVDPKVVYASKVRIYTKNGIERGVIGMLAPHLQDSESRKKVPTYDEIFVDLSLCERGVRVGDIAVIDQTAF 160 (346)
T ss_dssp EEEEC-----------CCCEEEEEETTEEEEEETTCCCSCCCCHHHHHTSCCTTCCEEEGGGSSSCCCTTCEEEECCCCE
T ss_pred EEEEeC---CccCcccccCEEEEEcCCCcEEEEEcCCCcccCchhhcccCCChhHeEEEeccchhcCCCCCEEEEccchh
Confidence 22 232100
Q ss_pred ccCCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecc
Q 020439 130 KVPGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (326)
Q Consensus 130 ~~~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~ 199 (326)
..+|+++||+. |.++++++.+++.+++.+ +++++.++|+.+|| |..|++.... .+ ..|+++..+.
T Consensus 161 ~~g~~i~g~~~D~r~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~--~i-~~~~~i~~D~ 228 (346)
T 1vho_A 161 ETNGKVVGKALDNRASCGVLVKVLEFLKRYD--HPWDVYVVFSVQEETGCLGALTGAY--EI-NPDAAIVMDV 228 (346)
T ss_dssp EETTEEEETTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEECTTSSSHHHHHHTTC--CC-CCSEEEEEEE
T ss_pred hhcCeEEeccCccHHHHHHHHHHHHHhhhcC--CCceEEEEEECCcccchhhHHHHhc--cc-CCCEEEEeec
Confidence 00256888876 689999999999987653 66899999999999 6678776432 12 3466665443
No 42
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.63 E-value=3.2e-15 Score=137.88 Aligned_cols=140 Identities=15% Similarity=0.182 Sum_probs=106.8
Q ss_pred HHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCcccC--------c-----
Q 020439 54 NIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDALAM--------E----- 120 (326)
Q Consensus 54 ~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtVp~--------~----- 120 (326)
+++++|+++||+|++|.++++++.++|+++|++++.+ ..+|+++++++.+.|+|+|.||+|||+. +
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~~~v~~i~~~G~~~~~ 85 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVL 85 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCEEEEEEECTTCCEEEE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccceEEEEECCCCeEEEE
Confidence 6899999999999999999999999999999998864 4579999876544489999999999951 0
Q ss_pred CCCCCcc---------------------------------------------------------------cCccCCeeec
Q 020439 121 ESVEWEH---------------------------------------------------------------KSKVPGKMHA 137 (326)
Q Consensus 121 ~~~~w~~---------------------------------------------------------------~~~~~g~l~G 137 (326)
....|.+ ....+|+++|
T Consensus 86 ~~Gg~~~~~~~g~~v~~~~~~G~~~~h~~~~~~~~~~~~~l~id~G~~s~~~~~~~gi~~g~~i~~~~~~~~~~~~~~~~ 165 (348)
T 1ylo_A 86 PVGNVRMAARQLQPVRITTREECKIPGLLDGDRQGNDVSAMRVDIGARTYDEVMQAGIRPGDRVTFDTTFQVLPHQRVMG 165 (348)
T ss_dssp EESCCCGGGSSSEEEEEECTTCCEEEEEEEEEEETTEEEEEEEECSCCSHHHHHHTTCCTTCEEEECCCCEEETTTEEEE
T ss_pred ecCCcchhhccCCEEEEEeCCCCCCcchhhhhccCCChhHEEEEecCCCHHHHHHcCCCCCCEEEEccccEEecCCEEEe
Confidence 0001110 0114688999
Q ss_pred CCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEecc
Q 020439 138 CGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHV 199 (326)
Q Consensus 138 rG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~ 199 (326)
|+. |+++++++.+++.+.+.+ ++.++.++++++|| |+.|++..... . ..|+++..+.
T Consensus 166 ~~~D~k~g~aa~l~al~~l~~~~--~~~~~~~~~t~~EEvG~~Ga~~~~~~-i--~~~~~i~~D~ 225 (348)
T 1ylo_A 166 KAFDDRLSCYLLVTLLRELHDAE--LPAEVWLVASSSEEVGLRGGQTATRA-V--SPDVAIVLDT 225 (348)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCC--CSSEEEEEEESCCTTSSHHHHHHHHH-H--CCSEEEEECC
T ss_pred cCcccHHHHHHHHHHHHHhhhcC--CCceEEEEEEcccccchhHHHHhhcc-c--CCCEEEEEec
Confidence 986 699999999999987653 67899999999999 67788765432 2 3466666543
No 43
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.61 E-value=4.9e-15 Score=135.58 Aligned_cols=126 Identities=13% Similarity=0.199 Sum_probs=100.0
Q ss_pred HHH-HHHHHHhhhCCCC-CcchHHHHHHHHHHHhh--cCCCeeecc----------cCceEEEEECCCCCcEEEEEeecC
Q 020439 50 YWM-VNIRRKIHENPEL-GFQEFETSKLIRAELDQ--MGIPYKFPV----------AVTGVVGYIGTGQPPFVALRADMD 115 (326)
Q Consensus 50 ~~~-i~~l~~l~~ips~-s~~e~~~~~~l~~~l~~--~G~~~~~~~----------~~~nvia~~~~~~~~~I~l~~H~D 115 (326)
+++ .+++++|+..+.+ |..+.++++||.++|++ +|++++.+. ...|+++++++.+.+.|++.+|+|
T Consensus 31 ~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~D 110 (329)
T 2afw_A 31 SEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYD 110 (329)
T ss_dssp HHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEecc
Confidence 778 8889999755544 33456899999999999 999887632 147999999765558999999999
Q ss_pred cccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhc--------cCCCCceEEEEEecCCCC--------c
Q 020439 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF--------RHEIKGTIVLVFQPAEEG--------G 176 (326)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~--------~~~~~~~i~~~~~~dEE~--------~ 176 (326)
|||.+ .|. |++ |+|+ ++|+|++|++++.|.+. +.+++++|.|++..+||. +
T Consensus 111 sv~~~---~~~------~~~-~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~~~~~~EE~~~~~~~~~g 180 (329)
T 2afw_A 111 SKYFS---HWN------NRV-FVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFLHWSPQDS 180 (329)
T ss_dssp CCCCC---CBT------TBC-CCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEEEEESCCSCSSSCCSSSS
T ss_pred CCCcC---ccc------CcC-CCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEEEEecCcccccccCCCcc
Confidence 99975 353 554 7887 69999999999999875 246899999999999995 3
Q ss_pred -ccHHHHHHc
Q 020439 177 -GGAKKMLDA 185 (326)
Q Consensus 177 -~G~~~l~~~ 185 (326)
.|+++++++
T Consensus 181 l~Gs~~~~~~ 190 (329)
T 2afw_A 181 LYGSRHLAAK 190 (329)
T ss_dssp CHHHHHHHHH
T ss_pred chhHHHHHHH
Confidence 699999875
No 44
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.58 E-value=1.6e-15 Score=138.33 Aligned_cols=139 Identities=14% Similarity=0.109 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc------cCceEEEEECCCCCcEEEEEeecCccc---
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTGQPPFVALRADMDALA--- 118 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~~~~~I~l~~H~DtVp--- 118 (326)
+.+++++++++|+++||+|++|.++++++.++|+++|++++.+. +.+|+++.+++ + |+|+|.||||||+
T Consensus 15 ~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~~~v 92 (321)
T 3cpx_A 15 LYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIGFTV 92 (321)
T ss_dssp GGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCEEEE
T ss_pred HHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCCeEe
Confidence 34788999999999999999999999999999999999876543 15789998755 4 7899999999994
Q ss_pred --------CcCCCCCc-----c---c----------------------------------CccCCeeecCCc--hHHHHH
Q 020439 119 --------MEESVEWE-----H---K----------------------------------SKVPGKMHACGH--DAHVAM 146 (326)
Q Consensus 119 --------~~~~~~w~-----~---~----------------------------------~~~~g~l~GrG~--k~~~a~ 146 (326)
.+....|. . . ...+|+++||+. |+|+++
T Consensus 93 ~~i~~~~~~Gg~~~~~~~~v~~~~~~g~~~gvi~~~ee~~~ida~~lv~~Gd~v~~~~~~~~~~g~i~~~~~D~k~G~aa 172 (321)
T 3cpx_A 93 SYNNHLHPIGSPSAKEGYRLVGKDSNGDIEGVLKIVDEEWMLETDRLIDRGTEVTFKPDFREEGDFILTPYLDDRLGVWT 172 (321)
T ss_dssp CSTTBEEEESSCCCCTTCEEEEEETTEEEEEEEECGGGSCEEECSSCCCTTCEEEECCCCEEETTEEECTTHHHHHHHHH
T ss_pred cccCCeEEcCChhhcccCEEEEEeCCCceeeeECCccHHHHHHHHhcCCCCCEEEeccCcEEEcCEEEEcCCcCHHHHHH
Confidence 33211121 0 0 000267888876 799999
Q ss_pred HHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHH---HccCCccccEEEEec
Q 020439 147 LLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKML---DAGALENVEAIFGLH 198 (326)
Q Consensus 147 ~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~---~~g~~~~~d~~i~~~ 198 (326)
++++++.++ + +.++|+++|| |+.|++... .+.. +.|+++..+
T Consensus 173 ~l~al~~l~-----~---i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D 218 (321)
T 3cpx_A 173 ALELAKTLE-----H---GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICD 218 (321)
T ss_dssp HHHHTTTCC-----S---EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECC
T ss_pred HHHHHHHhc-----C---cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEe
Confidence 999987653 1 9999999999 667887532 2211 356777643
No 45
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.50 E-value=3.2e-13 Score=124.33 Aligned_cols=144 Identities=15% Similarity=0.122 Sum_probs=106.1
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCC--CCcEEEEEeecCcccC--------
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTG--QPPFVALRADMDALAM-------- 119 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~--~~~~I~l~~H~DtVp~-------- 119 (326)
.++++++++|+++||+|++|.++++|+.++|+++|++++.+ ..+|+++++++. ++|+|+|.||||||+.
T Consensus 3 ~~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg~mV~~I~~~ 81 (355)
T 3kl9_A 3 TTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPD 81 (355)
T ss_dssp HHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCEEEEEEECTT
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEeccccccceEEEECCC
Confidence 35789999999999999999999999999999999988865 478999999654 3589999999999911
Q ss_pred --------cCC----------------------------------------CCCc-------------------------
Q 020439 120 --------EES----------------------------------------VEWE------------------------- 126 (326)
Q Consensus 120 --------~~~----------------------------------------~~w~------------------------- 126 (326)
|.. ..|.
T Consensus 82 G~l~~~~iGG~~~~~~~~~~v~i~t~~g~~~~Gvig~~~~H~~~~~~~~~~~~~~~~~iD~g~~s~ee~~~~GI~~Gd~v 161 (355)
T 3kl9_A 82 GTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTI 161 (355)
T ss_dssp SCEEEEEESCCCTTTCSSCEEEEECTTSCEEEEEEC---------------CCGGGSCEECCCSSHHHHHHTTCCTTCEE
T ss_pred CEEEEEecCCccccccCCCEEEEEcCCCCEEEEEEeCccccccChhhccCCCChhhEEEEeccCCHHHHHHcCCCCCCEE
Confidence 000 0011
Q ss_pred -ccC----cc-CCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEe
Q 020439 127 -HKS----KV-PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGL 197 (326)
Q Consensus 127 -~~~----~~-~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~ 197 (326)
|+. .. ++.+.|+.- +.++++++.+++.+++. +++.+++++|+..|| |..|++..... . .+|.+|..
T Consensus 162 ~~d~~~~~~~~~~~i~s~~lDnr~g~~~~l~~l~~l~~~--~~~~~v~~~ft~qEEvG~~Ga~~a~~~-~--~pd~~i~~ 236 (355)
T 3kl9_A 162 VPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQ--KLGNELYLGSNVQEEVGLRGAHTSTTK-F--DPEVFLAV 236 (355)
T ss_dssp EECCCCEECTTSSEEEESCHHHHHHHHHHHHHHHHHSSC--CCSSEEEEEEESCCTTTSHHHHHHHHH-H--CCSEEEEE
T ss_pred EeccceEEecCCCEEEeeccccHHHHHHHHHHHHHhhhc--CCCceEEEEEECccccCcchhHHHHhc-c--CCCEEEEe
Confidence 000 00 134555554 58999999999988754 578999999999999 76787765443 2 35666655
Q ss_pred cc
Q 020439 198 HV 199 (326)
Q Consensus 198 ~~ 199 (326)
+.
T Consensus 237 D~ 238 (355)
T 3kl9_A 237 DC 238 (355)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 46
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.39 E-value=1.1e-11 Score=112.36 Aligned_cols=131 Identities=15% Similarity=0.127 Sum_probs=98.9
Q ss_pred HHHHHHHHHhhhC-CCCCc--chHHHHHHHHHHHhhcCCCeeec-------c----cCceEEEEECCCCCcEEEEEeecC
Q 020439 50 YWMVNIRRKIHEN-PELGF--QEFETSKLIRAELDQMGIPYKFP-------V----AVTGVVGYIGTGQPPFVALRADMD 115 (326)
Q Consensus 50 ~~~i~~l~~l~~i-ps~s~--~e~~~~~~l~~~l~~~G~~~~~~-------~----~~~nvia~~~~~~~~~I~l~~H~D 115 (326)
+.+.+.++.|+++ |.+.+ ...++++||.++|+++|++++.. . ...|+|+++++...+.|++.+|+|
T Consensus 25 ~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~D 104 (309)
T 4fuu_A 25 DSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHWD 104 (309)
T ss_dssp HHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEECC
T ss_pred HHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeecC
Confidence 6788888888876 44433 45789999999999999998652 1 135899999876568999999999
Q ss_pred cccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-Cc--------------c
Q 020439 116 ALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GG--------------G 177 (326)
Q Consensus 116 tVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~--------------~ 177 (326)
++|..+.+... .++.....|+ -+|+|++|++++.|.+. +++.+|.|+|...|| |. .
T Consensus 105 s~~~~~~~~~~----~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~--~~~~~i~~~~~~~EE~Gl~~~~~~~~~~~~~l~ 178 (309)
T 4fuu_A 105 TRPWADNDADE----KNHHTPILGANDGASGVGALLEIARLVNQQ--QPELGIDIIFLDAEDYGTPQFYEGKHKEEAWCL 178 (309)
T ss_dssp CCSCCTTCSSG----GGTTSCCCCTTTTHHHHHHHHHHHHHHHHS--CCSSEEEEEEECSSSCCCCTTCCSCCCGGGSCH
T ss_pred CCCCCCCcccc----ccccCCcCCcccCchhHHHHHHHHHHHhhc--CCCCceEEEeecccccCccccccchhhhhhhhc
Confidence 99976422111 1122234565 27999999999999875 578999999999999 52 6
Q ss_pred cHHHHHHcc
Q 020439 178 GAKKMLDAG 186 (326)
Q Consensus 178 G~~~l~~~g 186 (326)
|++++++..
T Consensus 179 GS~~~~~~~ 187 (309)
T 4fuu_A 179 GSQYWSRNP 187 (309)
T ss_dssp HHHHHHHSC
T ss_pred chhHHHhcc
Confidence 899998764
No 47
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.38 E-value=1.8e-12 Score=119.20 Aligned_cols=65 Identities=17% Similarity=0.209 Sum_probs=58.7
Q ss_pred HHHHHHHHhhhCCCCCcchH-HHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCcc
Q 020439 51 WMVNIRRKIHENPELGFQEF-ETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDAL 117 (326)
Q Consensus 51 ~~i~~l~~l~~ips~s~~e~-~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtV 117 (326)
.+++++++|+++||+|++|. ++++|+.++|+++|++++.+ ..+|+++++++.+ |+|+|.||||||
T Consensus 10 ~~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~~-~~v~l~aHmDtV 75 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGSS-PRIMVAAHMDKI 75 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCSS-SEEEEECCCCBC
T ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCCC-CEEEEEeccccc
Confidence 35789999999999999999 99999999999999988865 4789999997654 899999999999
No 48
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.34 E-value=6.7e-12 Score=114.21 Aligned_cols=124 Identities=18% Similarity=0.224 Sum_probs=93.3
Q ss_pred HHHHH-HHHHhhhCCCC--CcchHHHHHHHHHHHhhc--CCCeeeccc----------CceEEEEECCCCCcEEEEEeec
Q 020439 50 YWMVN-IRRKIHENPEL--GFQEFETSKLIRAELDQM--GIPYKFPVA----------VTGVVGYIGTGQPPFVALRADM 114 (326)
Q Consensus 50 ~~~i~-~l~~l~~ips~--s~~e~~~~~~l~~~l~~~--G~~~~~~~~----------~~nvia~~~~~~~~~I~l~~H~ 114 (326)
+++.+ +|+.+ -+|.+ |..+.++++||.++|+++ |++++.+.. ..|+|+++++...+.|++.+|+
T Consensus 39 ~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~ 117 (330)
T 3pb6_X 39 QRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHY 117 (330)
T ss_dssp HHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEecc
Confidence 55555 55555 33433 445688999999999999 888775321 2699999977655899999999
Q ss_pred CcccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhc-----cCCCCceEEEEEecCCCC--------c-c
Q 020439 115 DALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEEG--------G-G 177 (326)
Q Consensus 115 DtVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~dEE~--------~-~ 177 (326)
|+||..+ |.....|+ .+|+|++|++++.|.+. +.+++.+|.|++..+||. + .
T Consensus 118 Dsv~~~~-----------g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~~~EE~f~~w~~~~gl~ 186 (330)
T 3pb6_X 118 DSKLFPP-----------GSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFLDGEEALKEWGPKDSLY 186 (330)
T ss_dssp CCCCCCT-----------TSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEESCCSCSSCCSTTSSCH
T ss_pred CCCCCCC-----------CCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEEcCcccccccCCCCCCc
Confidence 9998421 11134555 48999999999999873 357899999999999996 5 6
Q ss_pred cHHHHHHc
Q 020439 178 GAKKMLDA 185 (326)
Q Consensus 178 G~~~l~~~ 185 (326)
|+++++++
T Consensus 187 GS~~~a~~ 194 (330)
T 3pb6_X 187 GSRHLAQL 194 (330)
T ss_dssp HHHHHHHH
T ss_pred cHHHHHHH
Confidence 99998874
No 49
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=99.34 E-value=1.9e-11 Score=110.81 Aligned_cols=123 Identities=22% Similarity=0.278 Sum_probs=93.6
Q ss_pred HHHHHHHHHhhhCCCCCcc--hHHHHHHHHHHHhhcCCCeeecc-----------cCceEEEEECCCCCcEEEEEeecCc
Q 020439 50 YWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTGQPPFVALRADMDA 116 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~~~~~I~l~~H~Dt 116 (326)
..+-++|..++ +|.+.|- ..++++||.++|+++|++++.+. ...|+|+++++...+.|++.+|+|+
T Consensus 11 ~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs 89 (312)
T 4f9u_A 11 VHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDS 89 (312)
T ss_dssp HHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCC
T ss_pred HHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEec
Confidence 44555666664 6766653 47899999999999999986521 1259999998765589999999999
Q ss_pred ccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhc-----cCCCCceEEEEEecCCC-C--------cccH
Q 020439 117 LAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF-----RHEIKGTIVLVFQPAEE-G--------GGGA 179 (326)
Q Consensus 117 Vp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~-----~~~~~~~i~~~~~~dEE-~--------~~G~ 179 (326)
++..+.. + ..|+ -+|+|++|++++.|.+. +.+++++|.|++..+|| | ..|+
T Consensus 90 ~~~~~~~---------~---~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fdaEE~G~~~~~~~~L~GS 157 (312)
T 4f9u_A 90 KYFPNDP---------G---FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAFKEWTDADSVYGS 157 (312)
T ss_dssp CCCTTCT---------T---CCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEESCCSCSSSCSSSSSCHHH
T ss_pred CCCCCCC---------C---CCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEecCccccccCCccccccCh
Confidence 8754211 1 2354 38999999999998752 44689999999999999 5 4799
Q ss_pred HHHHHc
Q 020439 180 KKMLDA 185 (326)
Q Consensus 180 ~~l~~~ 185 (326)
++++++
T Consensus 158 ~~~a~~ 163 (312)
T 4f9u_A 158 KHLAAK 163 (312)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999875
No 50
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.30 E-value=7.4e-11 Score=107.71 Aligned_cols=146 Identities=19% Similarity=0.253 Sum_probs=104.1
Q ss_pred HHHHHhhcCchhHHHHHHHHHHhhhCCCCCcc--hHHHHHHHHHHHhhcCCCeeecc-----------cCceEEEEECCC
Q 020439 37 VKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKFPV-----------AVTGVVGYIGTG 103 (326)
Q Consensus 37 ~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~~-----------~~~nvia~~~~~ 103 (326)
.++.++.+... ...+-++++.|+ +|.+.|- ..++++||.++|+++|++++... ...|+|+++++.
T Consensus 26 ~~~~~~~~~~~-~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~ 103 (330)
T 4fai_A 26 PRFLEYSNLSD-KLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPN 103 (330)
T ss_dssp HHHHHHHTCCC-HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTT
T ss_pred HHHHhcccccH-HHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCC
Confidence 34555554432 156666777764 6777654 47899999999999999986521 125999999776
Q ss_pred CCcEEEEEeecCcccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhc---cCCCCceEEEEEecCCC-Cc
Q 020439 104 QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVF---RHEIKGTIVLVFQPAEE-GG 176 (326)
Q Consensus 104 ~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~---~~~~~~~i~~~~~~dEE-~~ 176 (326)
....|++.+|+|+++..+. ...|+ -+|+|++|++++.|.+. +.+++++|.|++..+|| |.
T Consensus 104 ~~~~i~l~aHyDs~~~~~~-------------~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE~Gl 170 (330)
T 4fai_A 104 AERYLVLSCHYDSKYMPGV-------------EFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEEAFE 170 (330)
T ss_dssp CSEEEEEEEECCCCCCTTS-------------CCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCSCSS
T ss_pred CCcEEEEEEeecccccccC-------------CCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEeccccccc
Confidence 5578999999999975321 12355 27999999999998753 45689999999999999 42
Q ss_pred --------ccHHHHHHc----cCCccccEEEEe
Q 020439 177 --------GGAKKMLDA----GALENVEAIFGL 197 (326)
Q Consensus 177 --------~G~~~l~~~----g~~~~~d~~i~~ 197 (326)
.|+++++++ +..+.+.+.+.+
T Consensus 171 ~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inl 203 (330)
T 4fai_A 171 EWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLL 203 (330)
T ss_dssp SCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEE
T ss_pred cccccchhhhhHHHHhcchhccchhceeEEEEe
Confidence 599999875 223344455543
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.30 E-value=8.7e-12 Score=113.98 Aligned_cols=66 Identities=21% Similarity=0.194 Sum_probs=58.6
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecccCceEEEEECCCCCcEEEEEeecCcc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPVAVTGVVGYIGTGQPPFVALRADMDAL 117 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~nvia~~~~~~~~~I~l~~H~DtV 117 (326)
-.+-+++++|+++||+||.|.++++++.++++++|.+++.+ ..+|+++++++ ++|+|+|.+|||+|
T Consensus 11 ~~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDev 76 (343)
T 3isx_A 11 HHMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEI 76 (343)
T ss_dssp SCCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBC
T ss_pred HHHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEeccccc
Confidence 34678999999999999999999999999999999988765 56899999854 45899999999999
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=98.85 E-value=1e-08 Score=96.75 Aligned_cols=97 Identities=18% Similarity=0.203 Sum_probs=73.3
Q ss_pred HHHHHHHHHHH---hh--cCCCeeecc----cCceEEEEECCC-----CCcEEEEEeecCcccCcCCCCCcccCccCCee
Q 020439 70 FETSKLIRAEL---DQ--MGIPYKFPV----AVTGVVGYIGTG-----QPPFVALRADMDALAMEESVEWEHKSKVPGKM 135 (326)
Q Consensus 70 ~~~~~~l~~~l---~~--~G~~~~~~~----~~~nvia~~~~~-----~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l 135 (326)
.+.+++|.+++ ++ .+++++.+. ...|+++++++. +.+.|++.+|+|+|+.
T Consensus 171 ~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~---------------- 234 (421)
T 2ek8_A 171 KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEK---------------- 234 (421)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTT----------------
T ss_pred HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCC----------------
Confidence 34567788888 32 222222111 146999999662 3488999999999984
Q ss_pred ecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHc
Q 020439 136 HACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDA 185 (326)
Q Consensus 136 ~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~ 185 (326)
|+|+ ++|++++|++++.|.+. +++++|.|+++.+|| |..|+++++++
T Consensus 235 -g~Ga~D~~~G~a~~le~~~~l~~~--~~~~~i~~~~~~~EE~g~~Gs~~~~~~ 285 (421)
T 2ek8_A 235 -APGANDDASGVAVTLELARVMSKL--KTDTELRFITFGAEENGLIGSKKYAAS 285 (421)
T ss_dssp -CCCTTTTHHHHHHHHHHHHHHTTS--CCSSEEEEEEESSSTTTSHHHHHHHTT
T ss_pred -CCCCCCCcHhHHHHHHHHHHHhcc--CCCceEEEEEECCccccchhHHHHHHh
Confidence 3454 68999999999999874 578999999999999 67899999875
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=98.84 E-value=1.1e-08 Score=97.14 Aligned_cols=114 Identities=22% Similarity=0.209 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhhcC-CCeee--------cccCceEEEEECCCC--CcEEEEEeecCcccCcCCCCCcccCccCCeeecC
Q 020439 70 FETSKLIRAELDQMG-IPYKF--------PVAVTGVVGYIGTGQ--PPFVALRADMDALAMEESVEWEHKSKVPGKMHAC 138 (326)
Q Consensus 70 ~~~~~~l~~~l~~~G-~~~~~--------~~~~~nvia~~~~~~--~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~Gr 138 (326)
.+.++.|.+.|+.-. +.++. .....|+++++++.. .+.|++.+|+|+|+.+ +
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g-----------------~ 265 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEG-----------------T 265 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSS-----------------C
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCC-----------------C
Confidence 455677777776421 32221 122469999997653 4789999999999843 3
Q ss_pred Cc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHHHHccCCccccEEEEeccc
Q 020439 139 GH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKMLDAGALENVEAIFGLHVS 200 (326)
Q Consensus 139 G~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l~~~g~~~~~d~~i~~~~~ 200 (326)
|+ ++|++++|++++.|.+.+.+++++|.|++..+|| +..|+++++++......+.++.++.+
T Consensus 266 Ga~D~~sG~a~~le~a~~l~~~~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~~~~~~~~~~n~D 331 (444)
T 3iib_A 266 GAIDDGAGVAIVTAAAKHILDLPQKPERTIRVVLYAAEELGLLGGKTYAKEHEAELEKHYIAAESD 331 (444)
T ss_dssp CTTTTHHHHHHHHHHHHHHHTSSSCCSEEEEEEEESCGGGTSHHHHHHHHHTGGGGGGEEEEEECC
T ss_pred CCccchHHHHHHHHHHHHHHhcCCCCCCeEEEEEECCcccCCcCHHHHHHhhHhhhhceeEEEECc
Confidence 43 5899999999999998877899999999999999 77999999986432212345554443
No 54
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=98.28 E-value=2.8e-06 Score=83.63 Aligned_cols=78 Identities=22% Similarity=0.267 Sum_probs=63.6
Q ss_pred CceEEEEECCC--CCcEEEEEeecCcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhc----cCCCCceEE
Q 020439 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVF----RHEIKGTIV 166 (326)
Q Consensus 93 ~~nvia~~~~~--~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~----~~~~~~~i~ 166 (326)
..|++++++|. +.+.|++.+|+|++..|.. +..+|+|++|++++.|.+. +.+++++|.
T Consensus 266 ~~NVi~~i~G~~~~~~~vvvgaH~Ds~~~Ga~----------------D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~ 329 (640)
T 3kas_A 266 ILNIFGVIKGFVEPDHYVVVGAQRDAWGPGAA----------------KSGVGTALLLKLAQMFSDMVLKDGFQPSRSII 329 (640)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSCCTT----------------TTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEE
T ss_pred EEEEEEEEeCCcCCCCceeeecccCCCCCCCC----------------cCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEE
Confidence 46999999765 3478999999999853310 1138999999999999864 668999999
Q ss_pred EEEecCCC-CcccHHHHHHcc
Q 020439 167 LVFQPAEE-GGGGAKKMLDAG 186 (326)
Q Consensus 167 ~~~~~dEE-~~~G~~~l~~~g 186 (326)
|++..+|| |..|+++++++.
T Consensus 330 f~~~~~EE~gl~GS~~~~~~~ 350 (640)
T 3kas_A 330 FASWSAGDFGSVGATEWLEGY 350 (640)
T ss_dssp EEEESSGGGTSHHHHHHHHHT
T ss_pred EEEECCcccCchhHHHHHHhh
Confidence 99999999 779999999864
No 55
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=98.26 E-value=2e-06 Score=85.54 Aligned_cols=77 Identities=25% Similarity=0.251 Sum_probs=63.1
Q ss_pred CceEEEEECCC--CCcEEEEEeecCcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHh---ccCCCCceEEE
Q 020439 93 VTGVVGYIGTG--QPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQV---FRHEIKGTIVL 167 (326)
Q Consensus 93 ~~nvia~~~~~--~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~---~~~~~~~~i~~ 167 (326)
..||++++++. +.+.|++.+|+|+++.| |-+..+|+|++|++++.|.+ .+.+++++|.|
T Consensus 312 ~~NVi~~i~G~~~~~~~vllgaH~Ds~~~G----------------a~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f 375 (707)
T 3fed_A 312 IYNVVGTIRGSVEPDRYVILGGHRDSWVFG----------------AIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIF 375 (707)
T ss_dssp EEEEEEEECCSSEEEEEEEEEEECCCSSSC----------------TTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred EEEEEEEEeCCCCCCceEEEeccccCCCCC----------------CccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEE
Confidence 45999999775 34789999999999742 11224899999999999876 46689999999
Q ss_pred EEecCCC-CcccHHHHHHc
Q 020439 168 VFQPAEE-GGGGAKKMLDA 185 (326)
Q Consensus 168 ~~~~dEE-~~~G~~~l~~~ 185 (326)
++..+|| |..|+++++++
T Consensus 376 ~~~~~EE~Gl~GS~~~~~~ 394 (707)
T 3fed_A 376 ASWDAEEFGLLGSTEWAEE 394 (707)
T ss_dssp EEESCGGGTSHHHHHHHHH
T ss_pred EEeCCccccchhHHHHHHh
Confidence 9999999 77899999885
No 56
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=94.39 E-value=0.33 Score=44.74 Aligned_cols=70 Identities=19% Similarity=0.075 Sum_probs=51.2
Q ss_pred eEEEEE--CCCCCcEEEEEeecCcccCcCCCCCcccCccCCeeecCCchHHHHHHHHHHHHHHhccCCCCceEEEEEecC
Q 020439 95 GVVGYI--GTGQPPFVALRADMDALAMEESVEWEHKSKVPGKMHACGHDAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPA 172 (326)
Q Consensus 95 nvia~~--~~~~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~d 172 (326)
.-++.+ +|...+.|++.+|+|+.... .|+. +|+|++++.++.|++. +++.++.|+|.+
T Consensus 167 l~y~e~~ipG~t~~~IllsaH~cHP~~A----------NDNa-------SG~a~lleLar~l~~~--~~~~t~rFvf~p- 226 (435)
T 3k9t_A 167 LTYGEYYIRGELEEEILLTTYTCHPSMC----------NDNL-------SGVALITFIAKALSKL--KTKYSYRFLFAP- 226 (435)
T ss_dssp EEEEEEEECCSSSCEEEEEEECCCCSCT----------TTTH-------HHHHHHHHHHHHHTTS--CCSSEEEEEEEC-
T ss_pred eEEEEEEecCCCCCEEEEEEEcCCCCCC----------Cccc-------hHHHHHHHHHHHHhcC--CCCceEEEEEcC-
Confidence 334544 66555999999999973211 1122 8999999999999864 578999999998
Q ss_pred CCCcccHHHHHHcc
Q 020439 173 EEGGGGAKKMLDAG 186 (326)
Q Consensus 173 EE~~~G~~~l~~~g 186 (326)
+..|+.+++.+.
T Consensus 227 --g~iGS~~yl~~~ 238 (435)
T 3k9t_A 227 --ETIGSITWLSRN 238 (435)
T ss_dssp --TTHHHHHHHHHC
T ss_pred --ccHHHHHHHHhC
Confidence 346888888764
No 57
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=87.62 E-value=10 Score=35.54 Aligned_cols=112 Identities=12% Similarity=-0.035 Sum_probs=70.1
Q ss_pred HHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc-------cCceEE--------------EEECCC-CCc
Q 020439 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AVTGVV--------------GYIGTG-QPP 106 (326)
Q Consensus 49 ~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~~nvi--------------a~~~~~-~~~ 106 (326)
..+-+.+.|+|++.|.---.-...+++..+.+++.|++++..+ +.+.++ -+|.+. ..+
T Consensus 166 ~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~~~~~~~ 245 (491)
T 2hc9_A 166 LSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHEVPGSTE 245 (491)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCTTCSC
T ss_pred HHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeCCCCCCC
Confidence 3678889999999997544557889999999999999987621 111122 223221 123
Q ss_pred EEEEEeecCcccCcCCCCCcccCccCCe-e-ec---CCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 107 FVALRADMDALAMEESVEWEHKSKVPGK-M-HA---CGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 107 ~I~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~G---rG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
+|+|.|-= -+|++ +|. | -+ .+| ++|.|+.+++++++.+. +++.+|..++..-|-
T Consensus 246 ~i~LVGKG----------iTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l--~l~vnv~~~l~~~EN 307 (491)
T 2hc9_A 246 HIALVGKG----------VVYDT--GGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKH--GFSQTLHACLCIVEN 307 (491)
T ss_dssp EEEEEEEE----------EEEEC--CTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTT--TCCSEEEEEEEEEEE
T ss_pred cEEEEcCc----------eEecC--CCccCCCCcChhhccccccHHHHHHHHHHHHHHc--CCCceEEEEEEeeec
Confidence 44444321 12221 110 1 02 223 49999999999999876 467888888877775
No 58
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=86.62 E-value=8.6 Score=36.35 Aligned_cols=113 Identities=12% Similarity=0.055 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcC--CCeeecc-------cC-------------ce-EEEEECC-C
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFPV-------AV-------------TG-VVGYIGT-G 103 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~-------------~n-via~~~~-~ 103 (326)
...+-+.+.|+|++-|.---.-...+++..+.+++.| ++++..+ +. +- ++-+|.+ +
T Consensus 179 ~~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~ 258 (503)
T 1gyt_A 179 AIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNA 258 (503)
T ss_dssp HHHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCC
Confidence 4478889999999999855555788899999999999 8887621 11 11 2223321 1
Q ss_pred --CCcEEEEEeecCcccCcCCCCCcccCccCCe-e-ecCCc------hHHHHHHHHHHHHHHhccCCCCceEEEEEecCC
Q 020439 104 --QPPFVALRADMDALAMEESVEWEHKSKVPGK-M-HACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAE 173 (326)
Q Consensus 104 --~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~GrG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dE 173 (326)
..++|+|.|- +-+|++ +|. | -+.|| .+|.|+.+++++++.+.+ ++.+|..+...-|
T Consensus 259 ~~~~~~i~LVGK----------GITFDs--GGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~--l~vnV~~~i~~~E 324 (503)
T 1gyt_A 259 SEDARPIVLVGK----------GLTFDS--GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQ--LPINVIGVLAGCE 324 (503)
T ss_dssp CTTCCCEEEEEE----------EEEEEC--CTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEE
T ss_pred CCCCCcEEEEcC----------ceEecC--CCccccCCcChhhcccccchHHHHHHHHHHHHHcC--CCeeEEEEEEeec
Confidence 1234444443 122221 111 1 12233 399999999999998874 6788888887777
Q ss_pred C
Q 020439 174 E 174 (326)
Q Consensus 174 E 174 (326)
-
T Consensus 325 N 325 (503)
T 1gyt_A 325 N 325 (503)
T ss_dssp E
T ss_pred c
Confidence 6
No 59
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=86.13 E-value=9.7 Score=35.79 Aligned_cols=113 Identities=13% Similarity=0.033 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhc-CCCeeecc-------cC-------------ce-EEEEECC-CC
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------AV-------------TG-VVGYIGT-GQ 104 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~-------------~n-via~~~~-~~ 104 (326)
...+-+.+.|+|++.|.---.-...+++..+.+++. |++++..+ +. +- ++-+|.+ +.
T Consensus 174 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 253 (490)
T 3jru_B 174 ATAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGD 253 (490)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCC
Confidence 347889999999999985555678889999998887 88887621 11 11 2223322 12
Q ss_pred CcEEEEEeecCcccCcCCCCCcccCccCCe-e-ecCC---c---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 105 PPFVALRADMDALAMEESVEWEHKSKVPGK-M-HACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 105 ~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~GrG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
.++|+|.|- +-+|++ +|. | -+.| | .+|.|+.+++++++.+.+ ++.+|..++..-|-
T Consensus 254 ~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 317 (490)
T 3jru_B 254 ARPYVLVGK----------GITFDT--GGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAE--LPINLVVVVPAVEN 317 (490)
T ss_dssp SCCEEEEEC----------EEEEEC--CTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCcEEEEcC----------eeEecC--CCccCCCcccHhhCcccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 244444432 112221 010 0 1222 2 399999999999998874 67888888877766
No 60
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=85.63 E-value=10 Score=35.73 Aligned_cols=113 Identities=10% Similarity=0.013 Sum_probs=72.0
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhc-CCCeeecc-------c-------------Cce-EEEEECC-C-
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------A-------------VTG-VVGYIGT-G- 103 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~-------------~~n-via~~~~-~- 103 (326)
...+-+.+.|+|++.|+---.-...+++..+.+++. |++++..+ + .+- ++-+|.+ +
T Consensus 178 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 257 (497)
T 3h8g_F 178 AIATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKK 257 (497)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCC
Confidence 447888999999999985555678899999999998 99887621 1 111 2223322 1
Q ss_pred CCcEEEEEeecCcccCcCCCCCcccCccCCe-e-ecCC---c---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 104 QPPFVALRADMDALAMEESVEWEHKSKVPGK-M-HACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 104 ~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~GrG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
..++|+|.|-= -+|++ +|. | -+.| | .+|.|+.+++++++.+.+ ++.+|..++..-|-
T Consensus 258 ~~~~i~LVGKG----------iTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~--l~vnv~~~i~~~EN 322 (497)
T 3h8g_F 258 ADKPFVLVGKG----------ITFDT--GGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQ--LPVNLVCLLACAEN 322 (497)
T ss_dssp TSCCEEEEEEE----------EEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEE
T ss_pred CCCcEEEEcCc----------eEecc--CCccCCCccchhhccccchHHHHHHHHHHHHHHcC--CCeEEEEEEEeecc
Confidence 12445554431 12221 010 0 1222 2 399999999999998874 67888888877776
No 61
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=84.72 E-value=2.8 Score=39.50 Aligned_cols=120 Identities=14% Similarity=0.106 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcC--CCeeecc-------cCceEEEEECCC-CCcEEEEEeecCcc
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMG--IPYKFPV-------AVTGVVGYIGTG-QPPFVALRADMDAL 117 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G--~~~~~~~-------~~~nvia~~~~~-~~~~I~l~~H~DtV 117 (326)
...+-+.+.|+|++.|.---.-...+++..+.+++.| ++++..+ +.+.+++.=.++ .+|+++...+.
T Consensus 159 ~~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~--- 235 (484)
T 1lam_A 159 LFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYK--- 235 (484)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEE---
T ss_pred HHHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEEC---
Confidence 3477889999999999855555788899999999999 8887621 111222221121 22333333221
Q ss_pred cCc-CC--------CCCcccCccCCe-e-ecCCc------hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 118 AME-ES--------VEWEHKSKVPGK-M-HACGH------DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 118 p~~-~~--------~~w~~~~~~~g~-l-~GrG~------k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
|.+ +. .+-+|++ +|. | -+.|| .+|.|+.+++++++.+.+ ++.+|..++..-|-
T Consensus 236 g~~~~~~~~i~LVGKGITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~--l~vnv~~~i~~~EN 305 (484)
T 1lam_A 236 GSPNASEPPLVFVGKGITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKLD--LPINIVGLAPLCEN 305 (484)
T ss_dssp CSSSTTSCCEEEEECEEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTT--CSSEEEEEEEEEEE
T ss_pred CCCCCCCCcEEEEecceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHcC--CCeeEEEEEEeecc
Confidence 110 00 0112221 111 1 12233 399999999999998874 67888888777666
No 62
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=84.26 E-value=11 Score=35.18 Aligned_cols=119 Identities=13% Similarity=0.145 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc------cCceEEEEECCC-CCcEEEEEeecCcccCcC
Q 020439 49 FYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV------AVTGVVGYIGTG-QPPFVALRADMDALAMEE 121 (326)
Q Consensus 49 ~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~------~~~nvia~~~~~-~~~~I~l~~H~DtVp~~~ 121 (326)
..+-+.+.|+|++.|+---.-...++...+.+++.|++++..+ +.+.+++.=.++ .+|+++...+- |...
T Consensus 166 ~a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y~---~~~~ 242 (482)
T 3ij3_A 166 WLTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKWG---DIKA 242 (482)
T ss_dssp HHHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEES---CTTS
T ss_pred HHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEeC---CCCC
Confidence 3678899999999997444557888999999999999887521 111122221222 22444443331 1110
Q ss_pred C------CCCcccCccCCe-ee-c---CCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 122 S------VEWEHKSKVPGK-MH-A---CGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 122 ~------~~w~~~~~~~g~-l~-G---rG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
. .+-+|++ +|. |- + .+| .+|.|+.+++++++.+. +++.+|..++..-|-
T Consensus 243 ~~i~LVGKGITFDs--GGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l--~lpvnv~~ii~~~EN 305 (482)
T 3ij3_A 243 PKVTLVGKGVCFDS--GGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQ--QLPVRLRLLIPAVEN 305 (482)
T ss_dssp CEEEEEECEEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHT--TCSSEEEEEEEEEEE
T ss_pred CeEEEEccceEeec--CCccCcCccchhhccccchHHHHHHHHHHHHHHc--CCCceEEEEEEeecc
Confidence 0 0111221 110 00 1 223 39999999999999887 477888888877776
No 63
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=83.94 E-value=11 Score=35.46 Aligned_cols=113 Identities=14% Similarity=0.084 Sum_probs=70.2
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhc-CCCeeecc-------cC-------------ce-EEEEECC-C-
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQM-GIPYKFPV-------AV-------------TG-VVGYIGT-G- 103 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~-G~~~~~~~-------~~-------------~n-via~~~~-~- 103 (326)
...+-+.+.|+|++.|+---.-...++...+.+++. |++++..+ +. +- ++-+|.+ +
T Consensus 162 ~~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~ 241 (486)
T 3pei_A 162 AIACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNE 241 (486)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCT
T ss_pred HHHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCC
Confidence 346788999999999985555678899999999988 89887621 11 11 2223322 1
Q ss_pred CCcEEEEEeecCcccCcCCCCCcccCccCCe-e-ecCC---c---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 104 QPPFVALRADMDALAMEESVEWEHKSKVPGK-M-HACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 104 ~~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~-l-~GrG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
..++|+|.|- +-+|++ +|. | -+.| | .+|.|+.+++++++.+.+ ++.+|..+...-|-
T Consensus 242 ~~~~i~LVGK----------GiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~--l~vnv~~~i~~~EN 306 (486)
T 3pei_A 242 GDAPIVLVGK----------GLVFDN--GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLN--LPVNVVGVMGLAEN 306 (486)
T ss_dssp TSCCEEEEEE----------EEETEE--CC------------EECSHHHHHHHHHHHHHHHHT--CSSEEEEEEEEEEC
T ss_pred CCCcEEEEcc----------ceEEec--CCcccCCccchhhhhccchHHHHHHHHHHHHHHcC--CCcEEEEEEEeecc
Confidence 1244444443 112221 111 1 0122 2 399999999999998874 67888888887776
No 64
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=83.63 E-value=11 Score=35.66 Aligned_cols=118 Identities=13% Similarity=0.028 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc-------cC-------------ce-EEEEECC-C-C
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AV-------------TG-VVGYIGT-G-Q 104 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~n-via~~~~-~-~ 104 (326)
...+-+.+.|+|++.|+---.-...++.+.+.+++.|++++..+ +. +- ++-+|.+ + .
T Consensus 195 ~~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 274 (515)
T 3kzw_A 195 SIGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKD 274 (515)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSS
T ss_pred HHHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 34678889999999998555567889999999999999987621 11 11 2222321 1 1
Q ss_pred CcEEEEEeecCcccCcCCCCCcccCccCCeeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 105 PPFVALRADMDALAMEESVEWEHKSKVPGKMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 105 ~~~I~l~~H~DtVp~~~~~~w~~~~~~~g~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
.++|+|.|-==|...|. . ..+.+. .=.+| .+|.|+.+++++++.+.+ ++.+|..++..-|-
T Consensus 275 ~~~i~LVGKGiTFDsGG---~---slKp~~-~M~~MK~DM~GAAaVlg~~~a~a~l~--lpvnv~~~i~~~EN 338 (515)
T 3kzw_A 275 EAPIALVGKGITYDSGG---Y---SIKTKN-GMATMKFDMCGAANVVGIIEAASRLQ--LPVNIVGVLACAEN 338 (515)
T ss_dssp CCCEEEEEEEEEEECCT---T---SCCCHH-HHTTGGGGGHHHHHHHHHHHHHHHTT--CSCEEEEEEEEEEE
T ss_pred CCcEEEecCceEEecCC---c---CCCCcc-ChhhchhchHHHHHHHHHHHHHHHcC--CCceEEEEEEeecc
Confidence 24444444311111110 0 011000 00233 399999999999998874 67888888777766
No 65
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=83.08 E-value=3 Score=39.39 Aligned_cols=50 Identities=16% Similarity=0.166 Sum_probs=40.2
Q ss_pred CceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 266 SQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 266 ~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
..|+|++.++. -++++++.+++|+++..+.+++.++++++++. ++.++++
T Consensus 347 ~~S~n~gv~~~------~~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~~----~g~~~~~ 396 (490)
T 3mru_A 347 ETSLNVGVITT------EENKVTVLCLIRSLIDSGRSQVEGMLQSVAEL----AGAQIEF 396 (490)
T ss_dssp EEEEEEEEEEE------ETTEEEEEEEEEESSHHHHHHHHHHHHHHHHH----TTCEEEE
T ss_pred eEEEEEEEEEE------eCCEEEEEEEcCCCCchHHHHHHHHHHHHHHH----cCCeEEe
Confidence 57888888863 36789999999999999999999998887664 5665543
No 66
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=82.93 E-value=0.36 Score=44.98 Aligned_cols=59 Identities=12% Similarity=0.131 Sum_probs=39.6
Q ss_pred hhhCCCCCcchHHHHHHHHHHHhhcCC---------------CeeecccCceEEEEECCCC----CcEEEEEeecCcc
Q 020439 59 IHENPELGFQEFETSKLIRAELDQMGI---------------PYKFPVAVTGVVGYIGTGQ----PPFVALRADMDAL 117 (326)
Q Consensus 59 l~~ips~s~~e~~~~~~l~~~l~~~G~---------------~~~~~~~~~nvia~~~~~~----~~~I~l~~H~DtV 117 (326)
++++=.-|.-+..+.+++.++|++.|| ++..+....|+++...+.. .+.+++.+|+|.+
T Consensus 8 ~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dsp 85 (428)
T 2ijz_A 8 LIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSP 85 (428)
T ss_dssp CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCS
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcC
Confidence 333333444567888899999999998 2222233378999764422 3689999999997
No 67
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=82.77 E-value=14 Score=34.75 Aligned_cols=111 Identities=9% Similarity=-0.031 Sum_probs=70.8
Q ss_pred HHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc-------cC-------------ce-EEEEECCC--CCc
Q 020439 50 YWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------AV-------------TG-VVGYIGTG--QPP 106 (326)
Q Consensus 50 ~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~~-------------~n-via~~~~~--~~~ 106 (326)
.+-+.+.|+|++.|.---.-...++...+.+++.|++++..+ +. +- ++-+|.+. ..+
T Consensus 204 a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~ 283 (522)
T 4efd_A 204 ATSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVK 283 (522)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSE
T ss_pred HHHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCC
Confidence 678889999999998555567889999999999999987621 11 11 22233322 124
Q ss_pred EEEEEeecCcccCcCCCCCcccCccCCe-ee-cCC---c---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 107 FVALRADMDALAMEESVEWEHKSKVPGK-MH-ACG---H---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 107 ~I~l~~H~DtVp~~~~~~w~~~~~~~g~-l~-GrG---~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
+|+|.|-= -+|++ +|. |- +.| | .+|.|+.+++++++.+. +++.+|..++..-|-
T Consensus 284 ~iaLVGKG----------ITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l--~lpvnV~~vl~~~EN 345 (522)
T 4efd_A 284 KVSLVGKG----------IVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRL--QQPVQLSCTLCLAEN 345 (522)
T ss_dssp EEEEEEEE----------EETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHH--TCSEEEEEEEEEEEC
T ss_pred cEEEecCc----------eEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHc--CCCceEEEEEEEecc
Confidence 45554431 12221 111 10 112 2 39999999999999886 477888888887776
No 68
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=81.90 E-value=0.6 Score=43.89 Aligned_cols=47 Identities=13% Similarity=0.152 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHHhhcCCC-------------eeecccCceEEEEE--CCC---CCcEEEEEeecCcc
Q 020439 69 EFETSKLIRAELDQMGIP-------------YKFPVAVTGVVGYI--GTG---QPPFVALRADMDAL 117 (326)
Q Consensus 69 e~~~~~~l~~~l~~~G~~-------------~~~~~~~~nvia~~--~~~---~~~~I~l~~H~DtV 117 (326)
+..+.+++.++|++.||. +..+ ...|.++.+ +.. .+.+ ++.+|+|..
T Consensus 35 ~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~-r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dsp 99 (458)
T 1y7e_A 35 EREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYT-CREKSVAFAIIGKNPIEDGMN-FIVSHTDSP 99 (458)
T ss_dssp HHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECB-CSSSCBCCEECCSSCGGGCCE-ECCCBCCCC
T ss_pred HHHHHHHHHHHHHHcCCcccccccccCCCCeEEEE-CCCCEEEEEEeCCCCCCCCcE-EEEEccCcC
Confidence 568999999999999986 2222 234554443 332 2355 999999997
No 69
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=81.76 E-value=24 Score=33.31 Aligned_cols=118 Identities=13% Similarity=0.095 Sum_probs=71.1
Q ss_pred hHHHHHHHHHHhhhCCCCCcchHHHHHHHHHHHhhcCCCeeecc-------c-------------Cce-EEEEECC-C-C
Q 020439 48 IFYWMVNIRRKIHENPELGFQEFETSKLIRAELDQMGIPYKFPV-------A-------------VTG-VVGYIGT-G-Q 104 (326)
Q Consensus 48 ~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-------~-------------~~n-via~~~~-~-~ 104 (326)
...+-+.+.|+|++.|+---.-...++...+..++.|++++..+ + .+- ++-+|.+ + .
T Consensus 203 ~~a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~ 282 (528)
T 3kr4_A 203 VYYFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDV 282 (528)
T ss_dssp HHHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCC
Confidence 44678999999999998555567788888888889999987621 1 111 2333422 2 1
Q ss_pred CcEEEEEeecCcccCcCCCCCcccCccC--C-eeecCCc---hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC
Q 020439 105 PPFVALRADMDALAMEESVEWEHKSKVP--G-KMHACGH---DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE 174 (326)
Q Consensus 105 ~~~I~l~~H~DtVp~~~~~~w~~~~~~~--g-~l~GrG~---k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE 174 (326)
.++|+|.|-==|...|. . +.+. | .+ .+| .+|.|+.+++++++.+.+ ..+.+|..++...|-
T Consensus 283 ~~~iaLVGKGITFDsGG---~---slKp~~g~~M--~~MK~DM~GAAaVlg~~~aia~l~-~~~vnv~~vi~~~EN 349 (528)
T 3kr4_A 283 KKKIALVGKGITFDSGG---Y---NLKAAPGSMI--DLMKFDMSGCAAVLGCAYCVGTLK-PENVEIHFLSAVCEN 349 (528)
T ss_dssp CEEEEEEEEEEEEECCT---T---SCSCSTTCCG--GGGGGGGHHHHHHHHHHHHHHHHC-CSSEEEEEEEEEEEE
T ss_pred CCcEEEecCceEeecCC---c---ccCCCCCcCH--HHhhcCcchHHHHHHHHHHHHhcC-CCCceEEEEEEeecc
Confidence 35566655421111110 0 0111 1 01 123 399999999999998764 225778777776665
No 70
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=81.57 E-value=3.2 Score=38.80 Aligned_cols=50 Identities=20% Similarity=0.147 Sum_probs=36.7
Q ss_pred chHHHHHHHHHHHhhcCCCee--e-----------cccCceEEEEECCCC--CcEEEEEeecCcc
Q 020439 68 QEFETSKLIRAELDQMGIPYK--F-----------PVAVTGVVGYIGTGQ--PPFVALRADMDAL 117 (326)
Q Consensus 68 ~e~~~~~~l~~~l~~~G~~~~--~-----------~~~~~nvia~~~~~~--~~~I~l~~H~DtV 117 (326)
-+..+.+++.++|++.||.-- . +....|+++...+.+ .+.+++.+|+|-+
T Consensus 32 t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp 96 (450)
T 2glf_A 32 TERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSP 96 (450)
T ss_dssp SHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccC
Confidence 367899999999999999531 1 112368999764432 3689999999997
No 71
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=71.36 E-value=8 Score=38.32 Aligned_cols=53 Identities=21% Similarity=0.253 Sum_probs=42.4
Q ss_pred ccccHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcc--hHHHHHHHHHHHhhcCCC-eee
Q 020439 33 TQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIP-YKF 89 (326)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~-~~~ 89 (326)
+++.+.+.+.++. +.+.+.++.|.++|-.+|- +.++++|+.+.++++|++ ++.
T Consensus 12 ~~l~~~~~~~~~~----~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 12 QSIRWKLVSEMKA----ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp -CHHHHHHHHCCH----HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHhCCH----HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 3456666676665 6788899999999988874 578999999999999999 654
No 72
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=64.37 E-value=1.4 Score=41.33 Aligned_cols=47 Identities=13% Similarity=0.118 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhhcCCCeeec-----------------ccCce-EEEEECCCC---CcEEEEEeecCcc
Q 020439 70 FETSKLIRAELDQMGIPYKFP-----------------VAVTG-VVGYIGTGQ---PPFVALRADMDAL 117 (326)
Q Consensus 70 ~~~~~~l~~~l~~~G~~~~~~-----------------~~~~n-via~~~~~~---~~~I~l~~H~DtV 117 (326)
..+.+++.++|++.||+ +.. +...| +++...+.+ .+.+++.+|+|.+
T Consensus 38 ~hav~~~~~~l~~sGfe-~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dsp 105 (461)
T 2glj_A 38 RECVTELIKTAEKSGYR-NIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSP 105 (461)
T ss_dssp SSTHHHHHHHSCCSSCC-CTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCh-hHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcC
Confidence 36888999999999997 210 11234 777654431 2459999999997
No 73
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=62.50 E-value=8.3 Score=35.48 Aligned_cols=48 Identities=13% Similarity=0.189 Sum_probs=36.7
Q ss_pred HHHHhhcCchhHHHHHHHHHHhhhCCCCCcc--hHHHHHHHHHHHhhcCCCeee
Q 020439 38 KFLDFAKKPEIFYWMVNIRRKIHENPELGFQ--EFETSKLIRAELDQMGIPYKF 89 (326)
Q Consensus 38 ~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~ 89 (326)
++.+.++. +++.+.++.|.+.|..+|- +.++++|+.++|+++|+++..
T Consensus 8 ~~~~~i~~----~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~ 57 (421)
T 2ek8_A 8 QITKRTDA----ENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEV 57 (421)
T ss_dssp HHHTTCCH----HHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhhCCH----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEE
Confidence 34455543 6788888888887776664 588999999999999997654
No 74
>3utk_A Lipoprotein OUTS; nested (perpendicular) alpha-helical hairpins, protein trans pilot protein; 1.65A {Dickeya dadantii} PDB: 3uym_A
Probab=58.30 E-value=14 Score=28.06 Aligned_cols=81 Identities=16% Similarity=-0.006 Sum_probs=25.8
Q ss_pred hhhHHHHHHHHHHhhCCccccCCCCChh---hcccccHHHHHhhcCchhHHHHHHHHHHhhhCCCCCcchHHHHHHHHHH
Q 020439 3 SSKLLSLLVTLYLLAPTSISSDVSLSPE---ELTQIPVKFLDFAKKPEIFYWMVNIRRKIHENPELGFQEFETSKLIRAE 79 (326)
Q Consensus 3 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~l~~l~~ips~s~~e~~~~~~l~~~ 79 (326)
+.|+.+++++++++++++++.+...... .-....+++.+.++- -....+|++-+..--+ .+|..+..-+...
T Consensus 5 ~~~~~~~~~~~~~L~GCq~~~~~~~~~~~~~~~~~~~~Q~eqLA~L----tA~~~YLK~~CgrsDi-Pd~~~I~r~av~~ 79 (133)
T 3utk_A 5 SLKVVLFGVCCLSLAACQTPAPVKNTASRSAASVPANEQISQLASL----VAASKYLRVQCERSDL-PDDGTILKTAVNV 79 (133)
T ss_dssp ---------------------------------CCHHHHHHHHHHH----HHHHHHHHHHSCCTTS-CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcccccccCCCCCChHHHHHHHHHH----HHHHHHHHHcCCCccC-CcHHHHHHHHHHH
Confidence 4567777788888999988771111000 000112233332211 1233455555544333 3566677777777
Q ss_pred HhhcCCCee
Q 020439 80 LDQMGIPYK 88 (326)
Q Consensus 80 l~~~G~~~~ 88 (326)
.++.|+++.
T Consensus 80 A~~rgWD~s 88 (133)
T 3utk_A 80 AVQKGWDTG 88 (133)
T ss_dssp HHHTTCCTT
T ss_pred HHHcCCCch
Confidence 788888775
No 75
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=56.68 E-value=3.3 Score=38.81 Aligned_cols=45 Identities=22% Similarity=0.207 Sum_probs=28.1
Q ss_pred CeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHH
Q 020439 133 GKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (326)
Q Consensus 133 g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~ 180 (326)
+.+.+++- +.+++++|.|+..+++ .++.+++++++..|| |+.|+.
T Consensus 247 ~~I~s~~lDdr~~~~~~l~al~~~~~---~~~~~~~~~~~d~EEVGs~ga~ 294 (458)
T 1y7e_A 247 ALIGAYGQDDKICVFTSLESIFDLEE---TPNKTAICFLVDKEEIGSTGST 294 (458)
T ss_dssp CEEEESSHHHHHHHHHHHHHHSSSSC---CCSSCEECCCBCSTTC------
T ss_pred CeEEEecCccHHHHHHHHHHHHhhhc---cCCceEEEEEEcccccCcccch
Confidence 56666665 4677777777655432 467899999999999 655554
No 76
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=55.54 E-value=6.4 Score=36.85 Aligned_cols=44 Identities=20% Similarity=0.227 Sum_probs=29.5
Q ss_pred CeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHH
Q 020439 133 GKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAK 180 (326)
Q Consensus 133 g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~ 180 (326)
+.+.+++- +.++.+++.|+..+. .++.+++++++..|| |+.|+.
T Consensus 253 ~~I~s~~lDdr~~~~~~l~al~~~~----~~~~~~~~~~~d~EEVGs~ga~ 299 (461)
T 2glj_A 253 SMVMGYGQDDRICAYTSFEAMLEMK----NAKKTCITILVDKEEVGSIGAT 299 (461)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHTCC----SCSSCEEEEEECCGGGTCCTTT
T ss_pred CEEEEecchhHHHHHHHHHHHHhhc----cCCCeEEEEEEccCCCCCcccc
Confidence 35555555 366666666665432 467899999999999 655443
No 77
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=48.33 E-value=20 Score=23.87 Aligned_cols=32 Identities=16% Similarity=0.072 Sum_probs=26.1
Q ss_pred CeEEEEEEEEccChhhHHHHHHHHHHHHHHHH
Q 020439 285 DSVTIGGTFRAFSKESIIQLKQRIEEVHLLIV 316 (326)
Q Consensus 285 ~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~ 316 (326)
|--++.+|+|...+...+...+++++.+.++.
T Consensus 15 dgqeieidirvstgkeleralqelekalarag 46 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAG 46 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhcc
Confidence 44688999999999999888888888776654
No 78
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=45.65 E-value=21 Score=33.11 Aligned_cols=40 Identities=15% Similarity=0.017 Sum_probs=28.7
Q ss_pred HHHHHHHHHhh-h---CCCCCcchHHHHHHHHHHHhhcCC-Ceee
Q 020439 50 YWMVNIRRKIH-E---NPELGFQEFETSKLIRAELDQMGI-PYKF 89 (326)
Q Consensus 50 ~~~i~~l~~l~-~---ips~s~~e~~~~~~l~~~l~~~G~-~~~~ 89 (326)
+++.+++++|. . ..+-|..+.++++|+.++|+++|+ ++..
T Consensus 21 ~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~ 65 (444)
T 3iib_A 21 SLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYK 65 (444)
T ss_dssp CHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEe
Confidence 34566666666 3 334455679999999999999999 4544
No 79
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=43.82 E-value=18 Score=33.73 Aligned_cols=42 Identities=26% Similarity=0.293 Sum_probs=27.5
Q ss_pred CeeecCCch--HHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccH
Q 020439 133 GKMHACGHD--AHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGA 179 (326)
Q Consensus 133 g~l~GrG~k--~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~ 179 (326)
+.+.|.+-| .++.+++.|+..+ .++.+++++++..|| |+.|+
T Consensus 241 ~~i~~~~lDnr~~~~~~l~al~~~-----~~~~~~~~~~~d~EEVGs~ga 285 (450)
T 2glf_A 241 SLIGAYGQDDRICAYTALRALLSA-----NPEKSIGVIFFDKEEIGSDGN 285 (450)
T ss_dssp CEEEETTHHHHHHHHHHHHHHHHC-----CCSSCEEEEEESCGGGTSCSS
T ss_pred cEEEEecchhhHHHHHHHHHHHhc-----CCCceEEEEEEcccccCCcch
Confidence 445555553 5566666665543 356789999999999 65443
No 80
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=32.40 E-value=9.9 Score=35.21 Aligned_cols=46 Identities=13% Similarity=-0.056 Sum_probs=32.9
Q ss_pred CCeeecCCc--hHHHHHHHHHHHHHHhccCCCCceEEEEEecCCC-CcccHHHH
Q 020439 132 PGKMHACGH--DAHVAMLLGAAKMLQVFRHEIKGTIVLVFQPAEE-GGGGAKKM 182 (326)
Q Consensus 132 ~g~l~GrG~--k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE-~~~G~~~l 182 (326)
++.+.+++- +.++.++|.|++.++ ..+.++.++| ..|| |+.|+...
T Consensus 226 ~~~I~s~~lDdr~~~~~~l~al~~~~----~~~~~v~~~f-d~EEVGs~ga~gA 274 (428)
T 2ijz_A 226 DEFIAGARLDNLLSCHAGLEALLNAE----GDENCILVCT-DHEEVGSCSHCGA 274 (428)
T ss_dssp SSSSSCCCSSCSSTTTTTTTHHHHTT----SCSSSCEEEE-CBSCTTTTCHHHH
T ss_pred CCeEEeecCccHHHHHHHHHHHHhcc----cCCceEEEEE-eccccCccchhhh
Confidence 356666665 478888888877664 3567888888 8999 76777654
No 81
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=31.81 E-value=24 Score=34.45 Aligned_cols=49 Identities=6% Similarity=0.069 Sum_probs=35.1
Q ss_pred ccHHHHHhhcCchhHHHHHHHHHHhhh---CCCCCc--chHHHHHHHHHHHhhcCCCe
Q 020439 35 IPVKFLDFAKKPEIFYWMVNIRRKIHE---NPELGF--QEFETSKLIRAELDQMGIPY 87 (326)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~i~~l~~l~~---ips~s~--~e~~~~~~l~~~l~~~G~~~ 87 (326)
+.+++.+.++. +++.+.++.|.+ -|..+| .+.++++||.++|+++|++.
T Consensus 7 l~~~l~~~i~~----~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~ 60 (640)
T 3kas_A 7 LKRKLSEKLDS----TDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSK 60 (640)
T ss_dssp HHHHHHHHHHT----CCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHhCCH----HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCcc
Confidence 44556666666 346777777776 344444 56889999999999999973
No 82
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=28.70 E-value=81 Score=22.84 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=27.8
Q ss_pred chHHHHHHHHHHHhhcCCCeee-cccCceEEEEEC
Q 020439 68 QEFETSKLIRAELDQMGIPYKF-PVAVTGVVGYIG 101 (326)
Q Consensus 68 ~e~~~~~~l~~~l~~~G~~~~~-~~~~~nvia~~~ 101 (326)
+=.+.++++.+.+.+.|+++.. ...|.|+.+++.
T Consensus 6 eMe~~~d~~~e~l~~~~ie~K~~~~~RSN~~i~f~ 40 (108)
T 1kaf_A 6 DMEEDKDLMLKLLDKNGFVLKKVEIYRSNYLAILE 40 (108)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHhhhcCceeeeeEeeccceEEeee
Confidence 3357889999999999999875 556899998873
No 83
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=26.89 E-value=46 Score=24.61 Aligned_cols=28 Identities=11% Similarity=-0.122 Sum_probs=24.5
Q ss_pred CCCCCcchHHHHHHHHHHHhhcCCCeee
Q 020439 62 NPELGFQEFETSKLIRAELDQMGIPYKF 89 (326)
Q Consensus 62 ips~s~~e~~~~~~l~~~l~~~G~~~~~ 89 (326)
.-|.+|+.+++++.|.+.+++.|++++.
T Consensus 5 Y~S~tGnT~~iA~~ia~~l~~~g~~v~~ 32 (138)
T 5nul_A 5 YWSGTGNTEKMAELIAKGIIESGKDVNT 32 (138)
T ss_dssp EECSSSHHHHHHHHHHHHHHHTTCCCEE
T ss_pred EECCCchHHHHHHHHHHHHHHCCCeEEE
Confidence 3577899999999999999999998765
No 84
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=26.41 E-value=1.4e+02 Score=27.57 Aligned_cols=52 Identities=6% Similarity=0.043 Sum_probs=37.5
Q ss_pred CCCceEEEEEEEcCCccccccCeEEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCeeee
Q 020439 264 LDSQVLTVAKFEGGGAFNIIPDSVTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFYSW 325 (326)
Q Consensus 264 ~~~~t~~i~~i~gG~~~n~iP~~~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 325 (326)
....|+|++.++--. +.+.+.+++|++.....+.+.+.+++. +..++++++|
T Consensus 343 ~~~~s~nl~~~~~~~------~~~~~~~~~R~~~~~~~~~~~~~~~~~----~~~~g~~~~~ 394 (487)
T 2qyv_A 343 VVETSLSIGVLKTED------NFVRSTMLVRSLIESGKSYVASLLKSL----ASLAQGNINL 394 (487)
T ss_dssp CEEEEEEEEEEEECS------SEEEEEEEEEESSHHHHHHHHHHHHHH----HHHHTCEEEE
T ss_pred ceEeccceEEEEEcC------CeEEEEEEccCCCHHHHHHHHHHHHHH----HHHcCceEEE
Confidence 345788999987533 579999999998887766666655544 5566777765
No 85
>1j27_A Hypothetical protein TT1725; structural genomics, hypothetical protein from thermus therm HB8, MAD; 1.70A {Thermus thermophilus} SCOP: d.58.50.1
Probab=25.65 E-value=1.4e+02 Score=21.37 Aligned_cols=36 Identities=8% Similarity=-0.109 Sum_probs=31.5
Q ss_pred EEEEEEEEccChhhHHHHHHHHHHHHHHHHHHcCCee
Q 020439 287 VTIGGTFRAFSKESIIQLKQRIEEVHLLIVANSNSFY 323 (326)
Q Consensus 287 ~~~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 323 (326)
..++++++++ ..+..+-..-++.+++++-.+|++.+
T Consensus 6 g~l~~~l~l~-~~SLKeKR~vvksl~~rlr~rFnVSv 41 (102)
T 1j27_A 6 GLYTARLETP-ARSLKEKRALIKPALERLKARFPVSA 41 (102)
T ss_dssp EEEEEEEECC-CSSHHHHHHHHHHHHHHHHHHSSCEE
T ss_pred EEEEEEEEEe-CCChHHhHHHHHHHHHHHhhcCCeEE
Confidence 4677888988 99999999999999999999998764
No 86
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=24.84 E-value=84 Score=28.19 Aligned_cols=29 Identities=0% Similarity=-0.316 Sum_probs=23.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHcCCeeeeC
Q 020439 298 KESIIQLKQRIEEVHLLIVANSNSFYSWL 326 (326)
Q Consensus 298 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 326 (326)
+.+.+++++.+.+.+++..+++++++.|+
T Consensus 120 gl~~~~vv~~v~~~~~~a~~~~gi~~~lI 148 (367)
T 3iar_A 120 DLTPDEVVALVGQGLQEGERDFGVKARSI 148 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 46788899988888888888898887663
No 87
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=23.39 E-value=53 Score=30.93 Aligned_cols=49 Identities=16% Similarity=0.015 Sum_probs=0.0
Q ss_pred cCCeeecCCch--HHHHHHHHHHHHHHhc----cCCCCceEEEEEecCCC-CcccHH
Q 020439 131 VPGKMHACGHD--AHVAMLLGAAKMLQVF----RHEIKGTIVLVFQPAEE-GGGGAK 180 (326)
Q Consensus 131 ~~g~l~GrG~k--~~~a~~l~a~~~l~~~----~~~~~~~i~~~~~~dEE-~~~G~~ 180 (326)
.++.+.|.+-| .++.+++.|+..+.+. .......+ ++++..|| |+.|++
T Consensus 275 ~~e~I~s~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVGs~ga~ 330 (496)
T 3vat_A 275 YEEFIFAPRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVGSESAQ 330 (496)
T ss_dssp TTCEEEETTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGTSCSSS
T ss_pred CCceEEeeccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcCCCcch
No 88
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=22.71 E-value=67 Score=23.44 Aligned_cols=28 Identities=11% Similarity=-0.129 Sum_probs=24.6
Q ss_pred CCCCCcchHHHHHHHHHHHhhcCCCeee
Q 020439 62 NPELGFQEFETSKLIRAELDQMGIPYKF 89 (326)
Q Consensus 62 ips~s~~e~~~~~~l~~~l~~~G~~~~~ 89 (326)
.-|.+|+.+++++.+.+.+++.|++++.
T Consensus 6 y~S~tGnT~~~a~~i~~~l~~~g~~v~~ 33 (137)
T 2fz5_A 6 YWSGTGNTEAMANEIEAAVKAAGADVES 33 (137)
T ss_dssp ECCSSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCCChHHHHHHHHHHHHHhCCCeEEE
Confidence 4678899999999999999999998865
No 89
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=20.61 E-value=87 Score=24.05 Aligned_cols=28 Identities=14% Similarity=-0.066 Sum_probs=24.7
Q ss_pred CCCCCcchHHHHHHHHHHHhhcCCCeee
Q 020439 62 NPELGFQEFETSKLIRAELDQMGIPYKF 89 (326)
Q Consensus 62 ips~s~~e~~~~~~l~~~l~~~G~~~~~ 89 (326)
.-|.+|+.+++++.|.+.+++.|++++.
T Consensus 7 Y~S~tGnT~~~A~~ia~~l~~~g~~v~~ 34 (161)
T 3hly_A 7 YLSDYGYSDRLSQAIGRGLVKTGVAVEM 34 (161)
T ss_dssp ECTTSTTHHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCChHHHHHHHHHHHHHHhCCCeEEE
Confidence 4678899999999999999999988764
Done!