Query 020441
Match_columns 326
No_of_seqs 170 out of 1166
Neff 9.4
Searched_HMMs 46136
Date Fri Mar 29 02:23:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020441.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020441hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3098 Uncharacterized conser 100.0 1.4E-33 3.1E-38 261.0 25.7 299 2-317 106-438 (461)
2 KOG3097 Predicted membrane pro 99.9 1E-25 2.2E-30 195.5 10.4 244 1-254 113-389 (390)
3 PRK09952 shikimate transporter 99.8 8.8E-18 1.9E-22 159.2 22.8 286 2-312 129-431 (438)
4 COG2814 AraJ Arabinose efflux 99.8 1.7E-17 3.8E-22 151.3 23.1 272 1-312 104-384 (394)
5 PRK10406 alpha-ketoglutarate t 99.8 3.4E-17 7.4E-22 154.9 23.4 286 2-315 128-425 (432)
6 PRK10642 proline/glycine betai 99.7 2.2E-16 4.8E-21 151.7 22.4 266 2-290 122-401 (490)
7 TIGR00900 2A0121 H+ Antiporter 99.7 4.4E-16 9.5E-21 142.8 22.0 262 2-290 96-360 (365)
8 PRK15075 citrate-proton sympor 99.7 4.7E-16 1E-20 147.2 21.5 264 2-290 121-391 (434)
9 PRK03545 putative arabinose tr 99.7 2.2E-15 4.7E-20 140.5 24.6 270 2-312 101-378 (390)
10 TIGR00883 2A0106 metabolite-pr 99.7 2.3E-15 5E-20 139.3 22.3 265 2-291 100-373 (394)
11 PRK10077 xylE D-xylose transpo 99.7 2.9E-15 6.2E-20 143.3 23.1 271 2-288 124-421 (479)
12 PRK10489 enterobactin exporter 99.7 8.5E-15 1.8E-19 137.8 25.4 256 2-291 114-372 (417)
13 PRK11551 putative 3-hydroxyphe 99.7 6.9E-15 1.5E-19 137.7 23.9 257 2-290 107-367 (406)
14 TIGR00893 2A0114 d-galactonate 99.7 4.5E-15 9.7E-20 137.1 20.8 266 2-290 86-370 (399)
15 TIGR00890 2A0111 Oxalate/Forma 99.7 5.6E-15 1.2E-19 135.9 21.3 257 2-291 95-355 (377)
16 PRK15402 multidrug efflux syst 99.7 7E-14 1.5E-18 131.0 25.9 258 2-290 105-367 (406)
17 TIGR00710 efflux_Bcr_CflA drug 99.7 6.2E-14 1.3E-18 129.9 24.8 254 2-287 97-356 (385)
18 PF07690 MFS_1: Major Facilita 99.7 1.7E-15 3.6E-20 138.4 13.8 257 2-284 89-352 (352)
19 PRK11195 lysophospholipid tran 99.6 1.1E-13 2.4E-18 129.3 25.6 257 2-290 92-353 (393)
20 PRK09556 uhpT sugar phosphate 99.6 2.7E-14 5.8E-19 136.5 21.7 267 2-290 126-409 (467)
21 PRK10213 nepI ribonucleoside t 99.6 1E-13 2.2E-18 129.6 25.2 249 2-290 112-363 (394)
22 PRK12307 putative sialic acid 99.6 3E-14 6.5E-19 134.2 21.5 261 2-291 110-381 (426)
23 PRK11102 bicyclomycin/multidru 99.6 8.9E-14 1.9E-18 128.8 24.2 255 2-287 83-343 (377)
24 PRK10091 MFS transport protein 99.6 1.8E-13 3.9E-18 127.4 25.5 249 2-290 95-347 (382)
25 TIGR00897 2A0118 polyol permea 99.6 2.2E-13 4.8E-18 127.6 26.1 259 2-291 109-374 (402)
26 PRK05122 major facilitator sup 99.6 1.7E-13 3.7E-18 128.0 25.1 277 2-322 116-397 (399)
27 PRK09874 drug efflux system pr 99.6 2.4E-13 5.2E-18 127.2 25.4 274 2-312 111-396 (408)
28 PRK03699 putative transporter; 99.6 2.7E-13 5.9E-18 126.6 25.7 252 2-291 99-353 (394)
29 PRK11273 glpT sn-glycerol-3-ph 99.6 1.5E-13 3.3E-18 130.8 24.0 289 2-314 124-435 (452)
30 PRK11663 regulatory protein Uh 99.6 1.8E-13 4E-18 129.5 23.6 265 2-290 115-396 (434)
31 TIGR00898 2A0119 cation transp 99.6 1.6E-13 3.4E-18 132.3 23.0 259 2-288 184-467 (505)
32 TIGR00711 efflux_EmrB drug res 99.6 7.7E-14 1.7E-18 133.5 20.7 268 2-290 94-407 (485)
33 TIGR00891 2A0112 putative sial 99.6 8.5E-14 1.8E-18 129.6 20.3 269 2-292 104-389 (405)
34 TIGR00901 2A0125 AmpG-related 99.6 1.4E-13 3E-18 126.6 20.9 252 5-277 90-355 (356)
35 PRK14995 methyl viologen resis 99.6 1E-13 2.2E-18 133.5 20.6 265 1-288 97-408 (495)
36 PRK03633 putative MFS family t 99.6 3.6E-13 7.7E-18 125.3 22.9 245 2-291 98-345 (381)
37 PRK11902 ampG muropeptide tran 99.6 7.8E-13 1.7E-17 123.9 25.2 252 5-288 101-360 (402)
38 PRK10133 L-fucose transporter; 99.6 3.8E-13 8.3E-18 127.5 23.1 261 2-291 121-405 (438)
39 PRK11646 multidrug resistance 99.6 5.2E-13 1.1E-17 125.1 23.4 250 2-291 103-357 (400)
40 PRK11010 ampG muropeptide tran 99.6 1.4E-12 3.1E-17 125.3 26.8 259 3-290 112-375 (491)
41 PRK12382 putative transporter; 99.6 5.9E-13 1.3E-17 124.1 23.6 246 2-291 116-362 (392)
42 TIGR00887 2A0109 phosphate:H+ 99.6 1.4E-13 3E-18 132.8 19.7 273 2-290 119-451 (502)
43 TIGR00899 2A0120 sugar efflux 99.6 4.5E-13 9.7E-18 123.7 22.4 250 3-291 92-347 (375)
44 TIGR00895 2A0115 benzoate tran 99.6 1.4E-13 3E-18 127.7 18.9 262 2-289 109-396 (398)
45 PRK08633 2-acyl-glycerophospho 99.6 7.8E-13 1.7E-17 139.5 26.7 267 2-290 107-381 (1146)
46 TIGR00902 2A0127 phenyl propri 99.6 5.3E-13 1.1E-17 124.2 22.4 251 2-291 98-353 (382)
47 TIGR00879 SP MFS transporter, 99.6 8.8E-14 1.9E-18 131.9 17.5 275 2-291 131-443 (481)
48 PRK11128 putative 3-phenylprop 99.6 6.9E-13 1.5E-17 123.4 23.1 253 2-291 98-353 (382)
49 PRK10473 multidrug efflux syst 99.6 1.1E-12 2.3E-17 122.5 23.9 251 2-291 95-351 (392)
50 PRK10504 putative transporter; 99.6 9.7E-13 2.1E-17 125.7 23.4 267 2-290 102-412 (471)
51 PRK09705 cynX putative cyanate 99.5 1.6E-12 3.5E-17 121.5 23.2 249 2-291 101-353 (393)
52 PRK11043 putative transporter; 99.5 4.8E-12 1E-16 118.4 26.3 251 2-290 98-354 (401)
53 PRK06814 acylglycerophosphoeth 99.5 2.1E-12 4.5E-17 136.2 26.6 267 1-290 111-393 (1140)
54 TIGR00894 2A0114euk Na(+)-depe 99.5 3.3E-13 7.1E-18 128.8 17.5 266 2-290 135-419 (465)
55 PRK03893 putative sialic acid 99.5 1.1E-12 2.4E-17 126.1 21.2 265 2-291 112-426 (496)
56 TIGR01272 gluP glucose/galacto 99.5 2.7E-12 5.8E-17 116.1 22.3 260 2-291 14-288 (310)
57 PRK15403 multidrug efflux syst 99.5 1E-11 2.2E-16 116.9 26.9 259 1-290 107-370 (413)
58 TIGR02332 HpaX 4-hydroxyphenyl 99.5 1.4E-12 3.1E-17 122.6 20.9 271 2-290 100-392 (412)
59 TIGR01299 synapt_SV2 synaptic 99.5 2.4E-12 5.1E-17 128.1 23.0 109 174-290 598-707 (742)
60 TIGR00892 2A0113 monocarboxyla 99.5 2E-12 4.3E-17 123.2 21.5 262 4-290 114-392 (455)
61 PLN00028 nitrate transmembrane 99.5 1.3E-12 2.9E-17 125.1 19.9 289 2-313 128-432 (476)
62 PRK11652 emrD multidrug resist 99.5 7.4E-12 1.6E-16 116.8 24.3 255 2-291 100-358 (394)
63 TIGR00881 2A0104 phosphoglycer 99.5 4.6E-13 1E-17 123.2 15.9 266 2-291 87-370 (379)
64 TIGR00712 glpT glycerol-3-phos 99.5 3.8E-12 8.2E-17 120.7 22.4 265 2-290 122-405 (438)
65 TIGR00792 gph sugar (Glycoside 99.5 1.7E-11 3.6E-16 115.9 26.4 260 6-290 107-377 (437)
66 cd06174 MFS The Major Facilita 99.5 1.4E-12 3.1E-17 118.5 18.5 231 2-291 91-325 (352)
67 TIGR00903 2A0129 major facilit 99.5 1.5E-11 3.3E-16 113.9 25.4 249 1-288 82-337 (368)
68 PRK10054 putative transporter; 99.5 3.8E-12 8.3E-17 119.1 21.5 252 3-291 101-357 (395)
69 PRK09528 lacY galactoside perm 99.5 3.1E-12 6.7E-17 120.5 20.9 232 41-291 138-376 (420)
70 PRK15034 nitrate/nitrite trans 99.5 8.9E-12 1.9E-16 117.5 22.8 232 2-263 132-376 (462)
71 TIGR00886 2A0108 nitrite extru 99.5 1.2E-12 2.5E-17 120.7 16.3 261 2-279 95-365 (366)
72 PRK15011 sugar efflux transpor 99.5 1.4E-11 3E-16 115.2 23.6 218 43-291 142-364 (393)
73 KOG0569 Permease of the major 99.5 8.6E-12 1.9E-16 117.4 21.7 274 1-290 119-427 (485)
74 PRK10207 dipeptide/tripeptide 99.5 1.9E-11 4E-16 117.4 24.1 271 3-289 110-437 (489)
75 TIGR00885 fucP L-fucose:H+ sym 99.5 1.1E-11 2.3E-16 116.6 21.9 259 2-292 98-380 (410)
76 TIGR00889 2A0110 nucleoside tr 99.4 1.7E-11 3.7E-16 115.5 21.3 118 170-291 250-369 (418)
77 KOG2532 Permease of the major 99.4 1.8E-11 3.9E-16 116.0 20.8 283 1-312 131-445 (466)
78 TIGR00882 2A0105 oligosacchari 99.4 4.1E-11 8.8E-16 112.0 21.6 230 43-291 132-368 (396)
79 PF11700 ATG22: Vacuole efflux 99.4 6.3E-10 1.4E-14 106.1 28.6 272 42-320 186-474 (477)
80 TIGR00896 CynX cyanate transpo 99.4 6.1E-11 1.3E-15 109.1 21.0 251 2-291 91-346 (355)
81 PF05977 MFS_3: Transmembrane 99.4 1.2E-10 2.6E-15 112.1 23.7 255 2-290 107-366 (524)
82 KOG3764 Vesicular amine transp 99.4 1.3E-12 2.8E-17 117.5 9.3 258 1-290 162-426 (464)
83 KOG2533 Permease of the major 99.3 1.6E-11 3.5E-16 116.7 14.1 186 2-198 138-336 (495)
84 TIGR00924 yjdL_sub1_fam amino 99.3 8.7E-10 1.9E-14 105.6 25.2 305 2-319 106-473 (475)
85 TIGR02718 sider_RhtX_FptX side 99.3 1.2E-09 2.5E-14 102.0 25.1 229 40-291 129-364 (390)
86 PRK09669 putative symporter Ya 99.3 5.9E-10 1.3E-14 105.9 21.9 233 39-288 141-383 (444)
87 PF13347 MFS_2: MFS/sugar tran 99.3 1.5E-10 3.3E-15 109.3 16.5 257 8-288 113-379 (428)
88 PRK10429 melibiose:sodium symp 99.3 5.3E-09 1.2E-13 100.2 26.3 238 39-288 138-388 (473)
89 TIGR00805 oat sodium-independe 99.2 2.4E-10 5.2E-15 113.0 16.8 187 2-200 176-396 (633)
90 PRK09584 tppB putative tripept 99.2 7E-09 1.5E-13 100.1 26.1 268 2-287 116-438 (500)
91 COG2271 UhpC Sugar phosphate p 99.2 3.6E-09 7.8E-14 96.5 18.7 284 6-313 125-433 (448)
92 TIGR00806 rfc RFC reduced fola 99.2 1.9E-08 4.1E-13 94.3 23.6 251 1-278 118-400 (511)
93 PRK11462 putative transporter; 99.1 4.2E-08 9E-13 93.7 25.9 226 39-285 141-379 (460)
94 TIGR00788 fbt folate/biopterin 99.1 1.4E-08 3.1E-13 97.1 22.1 270 4-291 126-411 (468)
95 COG2223 NarK Nitrate/nitrite t 99.1 6.9E-09 1.5E-13 94.7 18.0 248 2-280 109-362 (417)
96 COG0738 FucP Fucose permease [ 99.1 3.7E-08 8.1E-13 89.5 22.4 276 4-313 110-402 (422)
97 PF00083 Sugar_tr: Sugar (and 99.1 4.5E-14 9.7E-19 134.1 -16.8 275 1-291 105-409 (451)
98 PF05978 UNC-93: Ion channel r 99.1 4.9E-11 1.1E-15 96.0 3.2 62 1-72 92-153 (156)
99 KOG0254 Predicted transporter 99.1 5.7E-09 1.2E-13 101.0 18.2 86 1-101 145-230 (513)
100 KOG2504 Monocarboxylate transp 99.1 9.1E-09 2E-13 98.8 18.4 284 3-314 140-476 (509)
101 PRK10207 dipeptide/tripeptide 99.0 1.3E-08 2.9E-13 97.8 17.8 123 162-291 39-167 (489)
102 PRK09848 glucuronide transport 99.0 2.1E-07 4.6E-12 88.4 26.0 149 132-288 224-383 (448)
103 PF03209 PUCC: PUCC protein; 99.0 1.2E-06 2.7E-11 80.2 26.1 254 6-290 97-360 (403)
104 PF03825 Nuc_H_symport: Nucleo 98.9 4.9E-07 1.1E-11 84.6 24.0 155 128-291 199-362 (400)
105 PRK10054 putative transporter; 98.9 4.4E-08 9.5E-13 91.7 17.0 121 163-291 33-156 (395)
106 PRK09584 tppB putative tripept 98.9 9.5E-08 2.1E-12 92.2 19.2 151 162-319 46-206 (500)
107 PRK15462 dipeptide/tripeptide 98.9 8E-08 1.7E-12 91.8 18.3 148 162-316 34-191 (493)
108 PF07690 MFS_1: Major Facilita 98.9 3E-08 6.5E-13 90.4 14.7 136 165-308 24-166 (352)
109 COG2270 Permeases of the major 98.9 1.3E-07 2.8E-12 86.6 18.4 142 167-316 282-431 (438)
110 TIGR01301 GPH_sucrose GPH fami 98.9 9.2E-07 2E-11 84.3 24.6 269 11-287 127-438 (477)
111 COG2211 MelB Na+/melibiose sym 98.9 5.5E-07 1.2E-11 84.6 21.8 259 6-286 120-389 (467)
112 TIGR00924 yjdL_sub1_fam amino 98.9 8.7E-08 1.9E-12 91.9 16.9 116 168-291 43-165 (475)
113 PF01306 LacY_symp: LacY proto 98.9 6.4E-07 1.4E-11 83.2 21.1 156 126-291 210-373 (412)
114 PRK11646 multidrug resistance 98.9 1.9E-07 4E-12 87.6 17.7 119 165-291 38-159 (400)
115 PRK05122 major facilitator sup 98.8 1.4E-07 3E-12 88.1 16.3 144 145-290 24-171 (399)
116 PRK12382 putative transporter; 98.8 3E-07 6.5E-12 85.7 17.4 127 164-291 42-172 (392)
117 TIGR00900 2A0121 H+ Antiporter 98.8 4.4E-07 9.5E-12 83.0 17.6 117 171-291 34-152 (365)
118 PRK10213 nepI ribonucleoside t 98.8 8.4E-07 1.8E-11 83.0 18.6 117 167-291 49-168 (394)
119 TIGR02332 HpaX 4-hydroxyphenyl 98.7 4.1E-07 8.9E-12 85.6 16.4 118 165-290 35-155 (412)
120 TIGR00710 efflux_Bcr_CflA drug 98.7 6.3E-07 1.4E-11 82.9 17.4 118 166-291 33-153 (385)
121 KOG4686 Predicted sugar transp 98.7 1.3E-07 2.7E-12 82.2 11.1 118 162-290 289-411 (459)
122 PRK03545 putative arabinose tr 98.7 8.7E-07 1.9E-11 82.6 17.6 117 166-290 37-156 (390)
123 TIGR00890 2A0111 Oxalate/Forma 98.7 2.5E-07 5.4E-12 85.0 13.5 113 166-286 31-145 (377)
124 PRK09705 cynX putative cyanate 98.7 3.9E-07 8.4E-12 85.2 14.9 113 171-291 44-156 (393)
125 KOG1330 Sugar transporter/spin 98.7 1E-08 2.2E-13 94.6 4.0 253 2-278 125-396 (493)
126 PF06609 TRI12: Fungal trichot 98.7 2E-06 4.3E-11 83.5 19.9 112 172-288 350-462 (599)
127 TIGR00879 SP MFS transporter, 98.7 4.5E-07 9.7E-12 85.9 14.8 113 170-287 70-183 (481)
128 KOG0255 Synaptic vesicle trans 98.7 1.4E-05 3.1E-10 77.5 25.3 261 2-290 175-465 (521)
129 PRK10091 MFS transport protein 98.7 1.4E-06 2.9E-11 81.2 17.2 117 167-291 32-151 (382)
130 PRK11195 lysophospholipid tran 98.7 1.2E-06 2.7E-11 81.9 17.0 110 171-291 38-148 (393)
131 TIGR01299 synapt_SV2 synaptic 98.7 2.6E-06 5.6E-11 85.4 20.0 110 171-288 202-312 (742)
132 PRK10473 multidrug efflux syst 98.7 1.6E-06 3.4E-11 80.8 17.4 115 168-290 33-150 (392)
133 TIGR00891 2A0112 putative sial 98.7 1.3E-06 2.8E-11 81.2 16.6 117 166-290 40-159 (405)
134 TIGR00885 fucP L-fucose:H+ sym 98.6 2.3E-06 5E-11 80.5 18.1 142 141-290 8-153 (410)
135 PRK15402 multidrug efflux syst 98.6 1.3E-06 2.9E-11 81.8 16.5 117 166-290 41-160 (406)
136 KOG2615 Permease of the major 98.6 8.9E-07 1.9E-11 80.0 14.3 260 2-290 125-411 (451)
137 PRK15462 dipeptide/tripeptide 98.6 3.9E-05 8.5E-10 73.5 26.5 266 8-287 110-434 (493)
138 PF05977 MFS_3: Transmembrane 98.6 2.2E-06 4.7E-11 82.9 17.8 115 172-290 46-162 (524)
139 PRK10489 enterobactin exporter 98.6 2E-06 4.3E-11 80.9 17.1 116 171-290 52-169 (417)
140 PRK03633 putative MFS family t 98.6 1E-06 2.2E-11 81.9 14.9 113 171-291 41-154 (381)
141 PRK11551 putative 3-hydroxyphe 98.6 1.9E-06 4.2E-11 80.5 16.7 116 167-290 44-162 (406)
142 cd06174 MFS The Major Facilita 98.6 2.5E-06 5.3E-11 77.4 16.9 114 170-291 33-147 (352)
143 PRK11102 bicyclomycin/multidru 98.6 1.4E-06 3E-11 80.6 15.2 113 171-291 26-139 (377)
144 TIGR00895 2A0115 benzoate tran 98.6 7.5E-07 1.6E-11 82.4 13.2 116 167-290 46-164 (398)
145 PRK08633 2-acyl-glycerophospho 98.6 1.7E-06 3.8E-11 91.6 17.6 115 172-292 48-164 (1146)
146 PTZ00207 hypothetical protein; 98.6 4.8E-06 1E-10 81.2 18.0 133 154-290 44-179 (591)
147 TIGR00882 2A0105 oligosacchari 98.6 1E-06 2.2E-11 82.3 13.0 126 163-290 28-156 (396)
148 PRK11663 regulatory protein Uh 98.6 5.6E-06 1.2E-10 78.5 18.1 116 167-290 52-170 (434)
149 PRK15034 nitrate/nitrite trans 98.6 4.9E-06 1.1E-10 78.9 17.5 145 137-288 34-184 (462)
150 TIGR00880 2_A_01_02 Multidrug 98.6 8.7E-07 1.9E-11 69.1 10.6 106 178-291 5-111 (141)
151 TIGR00899 2A0120 sugar efflux 98.5 5.3E-06 1.1E-10 76.5 17.2 121 164-291 24-149 (375)
152 PRK10133 L-fucose transporter; 98.5 8.4E-06 1.8E-10 77.4 18.8 118 165-288 53-174 (438)
153 PRK15403 multidrug efflux syst 98.5 9.2E-06 2E-10 76.5 18.8 112 172-291 52-164 (413)
154 TIGR00896 CynX cyanate transpo 98.5 5.1E-06 1.1E-10 76.3 16.6 112 170-290 34-145 (355)
155 TIGR00711 efflux_EmrB drug res 98.5 2.3E-06 4.9E-11 81.9 14.7 117 167-291 31-150 (485)
156 TIGR00886 2A0108 nitrite extru 98.5 4.2E-06 9.2E-11 76.9 15.7 118 164-290 28-149 (366)
157 PRK11652 emrD multidrug resist 98.5 7.1E-06 1.5E-10 76.5 17.4 117 166-290 36-155 (394)
158 TIGR01301 GPH_sucrose GPH fami 98.5 8.4E-06 1.8E-10 77.7 17.6 122 167-290 33-175 (477)
159 PRK10504 putative transporter; 98.5 5.9E-06 1.3E-10 79.0 16.9 117 167-291 39-158 (471)
160 TIGR00893 2A0114 d-galactonate 98.5 1.6E-06 3.4E-11 79.9 12.3 112 171-290 29-141 (399)
161 KOG0252 Inorganic phosphate tr 98.5 1.1E-07 2.3E-12 87.7 3.7 293 2-313 148-497 (538)
162 PRK12307 putative sialic acid 98.5 4.9E-06 1.1E-10 78.4 15.0 117 166-290 46-165 (426)
163 PRK03699 putative transporter; 98.5 9.1E-06 2E-10 75.9 16.6 116 167-290 36-154 (394)
164 TIGR00897 2A0118 polyol permea 98.5 5.5E-06 1.2E-10 77.7 15.0 115 170-289 47-164 (402)
165 PRK14995 methyl viologen resis 98.5 1.1E-05 2.3E-10 78.0 17.3 118 166-291 34-155 (495)
166 PRK11273 glpT sn-glycerol-3-ph 98.5 1.5E-05 3.2E-10 76.0 18.1 112 170-285 62-175 (452)
167 PRK11043 putative transporter; 98.4 1.5E-05 3.2E-10 74.6 17.7 117 166-290 34-153 (401)
168 KOG2563 Permease of the major 98.4 7.6E-06 1.7E-10 75.6 15.1 238 40-290 172-419 (480)
169 PF03092 BT1: BT1 family; Int 98.4 2E-05 4.4E-10 74.7 18.5 265 9-290 97-377 (433)
170 PRK06814 acylglycerophosphoeth 98.4 1E-05 2.2E-10 85.9 17.6 112 172-291 53-168 (1140)
171 TIGR00712 glpT glycerol-3-phos 98.4 1.6E-05 3.5E-10 75.4 17.2 114 170-288 60-175 (438)
172 KOG3626 Organic anion transpor 98.4 1.3E-05 2.8E-10 78.8 16.1 186 2-199 241-457 (735)
173 PRK11902 ampG muropeptide tran 98.4 3.5E-05 7.6E-10 72.2 18.3 140 145-290 8-153 (402)
174 PRK09528 lacY galactoside perm 98.4 4.4E-06 9.6E-11 78.7 12.3 156 133-291 7-165 (420)
175 PRK09874 drug efflux system pr 98.4 2.2E-05 4.8E-10 73.3 16.8 110 173-291 56-166 (408)
176 TIGR00792 gph sugar (Glycoside 98.4 8.7E-06 1.9E-10 76.9 13.8 121 165-287 27-156 (437)
177 PRK09556 uhpT sugar phosphate 98.4 1.2E-05 2.5E-10 77.0 14.8 119 166-290 57-181 (467)
178 PRK10077 xylE D-xylose transpo 98.3 1.2E-05 2.7E-10 76.8 14.9 117 171-288 55-177 (479)
179 PRK03893 putative sialic acid 98.3 1.4E-05 3E-10 76.8 15.2 116 167-290 49-167 (496)
180 PRK11010 ampG muropeptide tran 98.3 4.5E-05 9.8E-10 73.5 18.6 153 132-290 8-166 (491)
181 PTZ00207 hypothetical protein; 98.3 4E-05 8.6E-10 74.9 18.2 128 176-314 396-552 (591)
182 TIGR00881 2A0104 phosphoglycer 98.3 1.9E-06 4.2E-11 79.0 8.6 110 171-288 30-141 (379)
183 PLN00028 nitrate transmembrane 98.3 4E-05 8.7E-10 73.6 17.6 116 165-289 63-181 (476)
184 TIGR00898 2A0119 cation transp 98.3 1.6E-05 3.5E-10 76.7 14.8 111 172-290 128-239 (505)
185 COG2271 UhpC Sugar phosphate p 98.3 1.2E-05 2.6E-10 73.8 12.2 112 168-287 61-173 (448)
186 KOG2615 Permease of the major 98.2 7.2E-06 1.6E-10 74.2 9.8 111 172-292 69-181 (451)
187 TIGR00892 2A0113 monocarboxyla 98.2 2.2E-05 4.8E-10 74.9 13.8 111 172-290 55-166 (455)
188 COG2807 CynX Cyanate permease 98.2 0.00043 9.4E-09 62.6 20.6 246 3-290 104-356 (395)
189 PRK10429 melibiose:sodium symp 98.2 4.5E-05 9.7E-10 73.2 15.6 119 165-285 34-161 (473)
190 PRK11462 putative transporter; 98.2 8.2E-05 1.8E-09 71.1 17.1 120 165-286 37-165 (460)
191 TIGR00903 2A0129 major facilit 98.2 4.8E-05 1E-09 70.6 15.0 112 171-291 26-138 (368)
192 KOG1330 Sugar transporter/spin 98.2 3E-07 6.5E-12 85.0 0.3 114 170-291 67-181 (493)
193 PRK09848 glucuronide transport 98.2 7.1E-05 1.5E-09 71.2 16.5 99 165-264 36-141 (448)
194 TIGR00887 2A0109 phosphate:H+ 98.2 0.00011 2.4E-09 71.0 17.5 115 172-288 57-172 (502)
195 PRK15011 sugar efflux transpor 98.2 0.00016 3.5E-09 67.5 18.0 142 142-291 21-167 (393)
196 KOG0253 Synaptic vesicle trans 98.2 7E-05 1.5E-09 67.8 14.4 124 178-309 388-514 (528)
197 TIGR00894 2A0114euk Na(+)-depe 98.2 1.4E-05 3.1E-10 76.2 10.9 114 172-291 77-191 (465)
198 TIGR00901 2A0125 AmpG-related 98.1 0.0001 2.2E-09 67.7 15.4 114 171-290 23-142 (356)
199 PRK11128 putative 3-phenylprop 98.1 0.00019 4.1E-09 66.7 16.6 112 170-291 38-152 (382)
200 COG3104 PTR2 Dipeptide/tripept 98.1 5.3E-05 1.1E-09 71.2 12.2 132 184-321 74-213 (498)
201 TIGR00902 2A0127 phenyl propri 98.1 0.00018 3.8E-09 67.0 15.7 115 170-291 38-152 (382)
202 PF06609 TRI12: Fungal trichot 98.1 0.00011 2.5E-09 71.5 14.7 97 165-270 71-169 (599)
203 PRK10406 alpha-ketoglutarate t 98.1 0.00035 7.7E-09 66.1 17.8 107 178-287 70-180 (432)
204 TIGR00883 2A0106 metabolite-pr 98.1 0.00015 3.2E-09 66.9 14.9 103 184-289 48-154 (394)
205 PRK09669 putative symporter Ya 98.0 7.3E-05 1.6E-09 71.0 13.1 118 166-285 38-164 (444)
206 PF03137 OATP: Organic Anion T 98.0 9.3E-07 2E-11 85.7 -0.2 188 1-199 144-370 (539)
207 PF13347 MFS_2: MFS/sugar tran 98.0 2.5E-05 5.5E-10 73.8 9.4 123 165-288 29-161 (428)
208 COG2211 MelB Na+/melibiose sym 98.0 0.00067 1.5E-08 64.1 17.8 156 165-322 40-212 (467)
209 PF06813 Nodulin-like: Nodulin 98.0 0.00025 5.5E-09 61.7 14.0 136 152-290 17-154 (250)
210 KOG2325 Predicted transporter/ 98.0 9.4E-05 2E-09 70.0 12.0 57 1-68 133-189 (488)
211 PRK09952 shikimate transporter 97.9 0.00057 1.2E-08 64.9 16.9 103 182-287 75-181 (438)
212 TIGR00806 rfc RFC reduced fola 97.9 0.00041 9E-09 65.6 14.9 115 167-290 55-173 (511)
213 COG2814 AraJ Arabinose efflux 97.9 0.002 4.2E-08 59.7 18.9 154 145-308 22-182 (394)
214 KOG3764 Vesicular amine transp 97.9 5.2E-05 1.1E-09 69.2 8.3 136 172-315 107-249 (464)
215 PF01770 Folate_carrier: Reduc 97.9 0.0067 1.4E-07 56.5 22.2 223 43-275 128-384 (412)
216 COG3104 PTR2 Dipeptide/tripept 97.9 0.0025 5.5E-08 60.1 19.1 306 4-323 123-496 (498)
217 PRK10642 proline/glycine betai 97.8 0.00063 1.4E-08 65.6 15.2 107 178-287 64-174 (490)
218 KOG0254 Predicted transporter 97.8 0.00032 6.9E-09 68.0 13.2 111 172-290 90-201 (513)
219 KOG4332 Predicted sugar transp 97.7 0.016 3.5E-07 50.6 20.7 199 121-325 232-446 (454)
220 KOG2325 Predicted transporter/ 97.7 0.00072 1.6E-08 64.1 13.5 137 170-311 70-226 (488)
221 TIGR00889 2A0110 nucleoside tr 97.7 0.00076 1.6E-08 63.7 13.8 117 167-290 32-153 (418)
222 TIGR00805 oat sodium-independe 97.7 0.00025 5.4E-09 70.5 10.5 120 171-291 68-232 (633)
223 COG2223 NarK Nitrate/nitrite t 97.7 0.0021 4.5E-08 59.3 15.4 146 136-290 13-162 (417)
224 COG0738 FucP Fucose permease [ 97.6 0.0028 6.1E-08 58.2 15.4 116 171-291 48-164 (422)
225 KOG0255 Synaptic vesicle trans 97.6 0.0011 2.3E-08 64.5 13.6 112 172-292 119-231 (521)
226 PRK15075 citrate-proton sympor 97.6 0.0013 2.8E-08 62.3 13.7 101 185-288 70-174 (434)
227 PF03825 Nuc_H_symport: Nucleo 97.6 0.0035 7.6E-08 58.8 15.6 107 169-283 35-141 (400)
228 PF05631 DUF791: Protein of un 97.5 0.017 3.6E-07 52.6 18.7 87 166-261 64-151 (354)
229 PF01306 LacY_symp: LacY proto 97.5 0.00064 1.4E-08 63.4 9.2 124 163-291 33-162 (412)
230 KOG3810 Micronutrient transpor 97.4 0.031 6.8E-07 50.6 18.5 222 40-276 126-371 (433)
231 KOG2816 Predicted transporter 97.4 0.062 1.3E-06 51.3 21.9 253 13-290 127-389 (463)
232 KOG2532 Permease of the major 97.3 0.0025 5.4E-08 60.9 11.6 134 172-311 74-213 (466)
233 TIGR02718 sider_RhtX_FptX side 97.3 0.019 4.1E-07 53.4 17.3 61 144-205 9-72 (390)
234 KOG0252 Inorganic phosphate tr 97.3 0.0071 1.5E-07 56.6 13.8 116 172-288 85-205 (538)
235 PF05631 DUF791: Protein of un 97.3 0.024 5.1E-07 51.6 16.7 173 1-197 124-304 (354)
236 KOG0569 Permease of the major 97.2 0.0068 1.5E-07 57.8 13.4 106 177-287 66-172 (485)
237 PF03209 PUCC: PUCC protein; 97.2 0.024 5.2E-07 52.5 15.5 103 185-287 28-145 (403)
238 COG2807 CynX Cyanate permease 97.0 0.033 7.2E-07 50.7 14.7 111 172-291 48-158 (395)
239 KOG3762 Predicted transporter 97.0 0.0081 1.7E-07 57.3 11.1 185 124-318 359-551 (618)
240 TIGR00880 2_A_01_02 Multidrug 96.9 0.0021 4.5E-08 49.7 5.9 82 3-100 56-137 (141)
241 TIGR00769 AAA ADP/ATP carrier 96.9 0.4 8.6E-06 45.9 22.2 160 39-201 160-333 (472)
242 PF03219 TLC: TLC ATP/ADP tran 96.8 0.49 1.1E-05 45.6 23.0 159 40-201 176-349 (491)
243 TIGR00926 2A1704 Peptide:H+ sy 96.8 0.032 6.9E-07 55.7 14.1 107 184-291 36-148 (654)
244 KOG2533 Permease of the major 96.8 0.03 6.5E-07 53.9 13.4 110 172-289 82-192 (495)
245 KOG2504 Monocarboxylate transp 96.7 0.0085 1.8E-07 58.0 9.1 111 172-290 82-193 (509)
246 TIGR00788 fbt folate/biopterin 96.7 0.063 1.4E-06 51.5 14.9 119 164-290 52-181 (468)
247 PF11700 ATG22: Vacuole efflux 96.6 0.11 2.4E-06 49.9 15.7 89 173-266 72-160 (477)
248 PF00083 Sugar_tr: Sugar (and 96.3 0.00018 3.9E-09 68.3 -5.0 113 173-290 48-161 (451)
249 KOG2563 Permease of the major 96.3 0.12 2.5E-06 48.6 13.2 117 171-290 79-199 (480)
250 PF02487 CLN3: CLN3 protein; 96.2 0.28 6.1E-06 45.8 15.7 59 232-290 335-394 (402)
251 PF06963 FPN1: Ferroportin1 (F 96.0 1.4 3.1E-05 41.7 21.7 250 39-297 144-422 (432)
252 KOG0637 Sucrose transporter an 95.9 0.05 1.1E-06 51.0 8.8 146 144-291 38-203 (498)
253 PF00854 PTR2: POT family; In 95.9 0.053 1.1E-06 50.3 9.2 88 233-320 34-129 (372)
254 PF12832 MFS_1_like: MFS_1 lik 95.8 0.037 8E-07 38.9 6.1 37 168-204 32-68 (77)
255 KOG0253 Synaptic vesicle trans 95.1 0.34 7.4E-06 44.6 11.2 115 172-296 114-233 (528)
256 KOG2816 Predicted transporter 95.0 0.62 1.3E-05 44.6 13.4 102 179-291 70-172 (463)
257 COG0477 ProP Permeases of the 95.0 0.76 1.7E-05 39.6 13.2 113 172-290 40-155 (338)
258 TIGR01272 gluP glucose/galacto 94.9 0.27 5.9E-06 44.4 10.2 60 232-291 10-70 (310)
259 TIGR00939 2a57 Equilibrative N 94.5 4.5 9.8E-05 38.5 21.9 88 173-262 309-402 (437)
260 PF05978 UNC-93: Ion channel r 93.9 0.78 1.7E-05 37.0 9.7 94 184-286 50-148 (156)
261 COG2270 Permeases of the major 93.7 0.58 1.3E-05 43.7 9.6 89 171-264 58-147 (438)
262 PF07672 MFS_Mycoplasma: Mycop 93.5 2 4.4E-05 37.5 12.1 80 177-259 147-231 (267)
263 KOG3762 Predicted transporter 92.8 0.15 3.2E-06 49.0 4.5 76 2-94 463-539 (618)
264 COG3202 ATP/ADP translocase [E 92.2 11 0.00025 36.0 20.9 32 40-71 180-211 (509)
265 TIGR00926 2A1704 Peptide:H+ sy 91.7 13 0.00028 37.4 16.8 63 39-101 119-182 (654)
266 KOG4332 Predicted sugar transp 91.0 1.2 2.7E-05 39.2 7.7 115 167-290 68-190 (454)
267 KOG1479 Nucleoside transporter 90.7 8.9 0.00019 35.9 13.5 87 172-262 283-373 (406)
268 TIGR00939 2a57 Equilibrative N 90.1 8.1 0.00018 36.8 13.2 31 233-264 107-137 (437)
269 TIGR00769 AAA ADP/ATP carrier 86.1 34 0.00073 33.0 19.9 34 171-205 43-77 (472)
270 KOG3098 Uncharacterized conser 85.7 2.6 5.7E-05 40.2 6.9 101 178-287 57-162 (461)
271 PF03092 BT1: BT1 family; Int 82.5 4.3 9.3E-05 38.5 7.0 54 6-69 326-379 (433)
272 PF02990 EMP70: Endomembrane p 82.4 26 0.00057 34.2 12.4 77 118-200 243-326 (521)
273 KOG3880 Predicted small molecu 79.3 18 0.0004 32.8 9.1 56 233-288 343-399 (409)
274 PF01733 Nucleoside_tran: Nucl 76.2 0.97 2.1E-05 40.8 0.4 84 176-262 187-278 (309)
275 COG0477 ProP Permeases of the 75.6 4.1 9E-05 34.9 4.3 71 2-85 98-169 (338)
276 PF03219 TLC: TLC ATP/ADP tran 70.7 1.1E+02 0.0023 29.8 21.0 69 136-206 24-93 (491)
277 KOG1479 Nucleoside transporter 70.4 62 0.0013 30.4 10.6 31 233-264 118-148 (406)
278 PF01770 Folate_carrier: Reduc 69.3 1E+02 0.0022 29.1 12.2 91 191-290 61-152 (412)
279 KOG1278 Endosomal membrane pro 68.3 61 0.0013 31.6 10.2 19 178-196 370-388 (628)
280 KOG4686 Predicted sugar transp 67.1 14 0.0003 33.3 5.3 87 3-102 357-444 (459)
281 PF00854 PTR2: POT family; In 65.9 8.1 0.00018 35.6 4.1 82 6-100 41-122 (372)
282 PF06813 Nodulin-like: Nodulin 65.3 16 0.00036 31.8 5.6 19 39-57 126-144 (250)
283 PRK03612 spermidine synthase; 60.0 1.8E+02 0.0038 28.5 15.8 25 172-196 51-75 (521)
284 PF06779 DUF1228: Protein of u 59.4 62 0.0013 23.1 6.7 48 167-215 23-70 (85)
285 PF06166 DUF979: Protein of un 55.6 1.5E+02 0.0034 26.5 10.7 22 44-65 29-50 (308)
286 PF13000 Acatn: Acetyl-coenzym 52.8 2.3E+02 0.005 27.7 20.3 75 120-196 262-338 (544)
287 KOG0637 Sucrose transporter an 48.1 1.3E+02 0.0029 28.9 8.7 28 174-201 335-362 (498)
288 KOG3626 Organic anion transpor 44.8 92 0.002 31.8 7.6 56 235-290 240-296 (735)
289 KOG3574 Acetyl-CoA transporter 41.4 1.4E+02 0.003 28.2 7.6 20 136-155 31-50 (510)
290 TIGR01478 STEVOR variant surfa 34.4 79 0.0017 28.0 4.7 26 294-319 263-288 (295)
291 COG3202 ATP/ADP translocase [E 33.6 4.6E+02 0.01 25.5 19.8 68 136-205 27-95 (509)
292 PTZ00370 STEVOR; Provisional 33.2 83 0.0018 27.9 4.6 38 282-319 247-284 (296)
293 PF03137 OATP: Organic Anion T 31.7 13 0.00029 36.3 -0.4 119 171-290 38-200 (539)
294 PF07857 DUF1632: CEO family ( 31.3 1.2E+02 0.0025 26.6 5.3 79 10-104 59-139 (254)
295 KOG3574 Acetyl-CoA transporter 29.7 5E+02 0.011 24.7 13.3 42 239-280 376-418 (510)
296 PF07672 MFS_Mycoplasma: Mycop 25.3 93 0.002 27.4 3.6 47 13-64 216-262 (267)
297 TIGR02840 spore_YtaF putative 24.8 4.2E+02 0.0091 22.3 14.4 27 41-67 31-58 (206)
298 PF09964 DUF2198: Uncharacteri 23.3 2.6E+02 0.0057 19.3 5.6 53 271-323 21-74 (74)
299 PF15102 TMEM154: TMEM154 prot 23.2 37 0.0008 26.9 0.7 24 298-321 66-89 (146)
300 PF05393 Hum_adeno_E3A: Human 21.2 2.1E+02 0.0045 20.5 4.0 23 297-319 38-60 (94)
301 KOG3097 Predicted membrane pro 20.5 6.9E+02 0.015 23.2 8.3 19 269-287 163-181 (390)
302 PRK11469 hypothetical protein; 20.2 5E+02 0.011 21.5 12.1 22 193-215 157-178 (188)
No 1
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.4e-33 Score=261.03 Aligned_cols=299 Identities=26% Similarity=0.387 Sum_probs=230.1
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCC---CCCCCC
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK---GGSTSG 78 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~---~~~~~~ 78 (326)
+.++++.|+|++.+|++||.|++||+++ ++++|+.+++|++.++++++|+.+.+.+.+..+ ......
T Consensus 106 yfssallG~Gaallw~GqG~ylt~~st~----------~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~ 175 (461)
T KOG3098|consen 106 YFSSALLGFGAALLWTGQGGYLTSNSTR----------ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGT 175 (461)
T ss_pred HHHHHHhhhhHHheecccceehhhcCCh----------hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccch
Confidence 5789999999999999999999999995 599999999999999999999999988776432 111111
Q ss_pred -------------chhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHH
Q 020441 79 -------------TTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF 145 (326)
Q Consensus 79 -------------~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~ 145 (326)
.+.+|.++..+..++++...++|.++.+.+.+ . .+ .+.++++|.+.+++++||+++++|.+
T Consensus 176 ~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~~~~~---~--~~-~~~~~~l~~~~~l~~~~~ml~L~~~f 249 (461)
T KOG3098|consen 176 RRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVVNCKS---S--SE-TSFSELLKLTFKLLKTPKMLLLFPFF 249 (461)
T ss_pred hhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchhhhhh---h--cc-ccHHHHHHHHHHHhcCHhHHHHHHHH
Confidence 23344444444555555555555443332211 1 11 47889999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccccc-cccccch---hhHHHHHHHHHHHHHHHhhhhhhcc---CCCChhhHHHHHHHHHHHHHHH
Q 020441 146 AYSGLQQAFVWAEFTKEIV-TPALGVS---GVGGAMAVYGAFDAICSLAAGRLTT---GLPSITFIVSGGAIAQVVVFLW 218 (326)
Q Consensus 146 ~~~g~~~~f~~~~~~~~~~-~~~lg~~---~~~~~~~~~gi~~~i~~~~~G~l~d---~~g~~~~i~~~g~i~~~~~~~~ 218 (326)
+++|++.+|+.++|++.+. ++..+.. ..++.++..|+++.+++...+.+.| |+|++ +++..+.++|....++
T Consensus 250 ~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~-~~~~~~~~~~~~~~~l 328 (461)
T KOG3098|consen 250 FYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK-PTVLIGIIIHLIGFLL 328 (461)
T ss_pred HHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC-cchhHHHHHHHHHHHH
Confidence 9999999999999987553 3344432 4566678889999998888887765 46677 5888899999877766
Q ss_pred HHhcccCCCCC-----------cchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHh
Q 020441 219 ILINYSVTSGV-----------LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 219 ~~l~~~~~~~~-----------~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
..++.+.|.|. ......++++++.|++|+++|++.+++++.++|+++..+|+++++.|++++|++++.+
T Consensus 329 i~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~ 408 (461)
T KOG3098|consen 329 IHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFS 408 (461)
T ss_pred HhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhh
Confidence 66666655432 1124678999999999999999999999999999998899999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020441 288 PYISLQAMLIVMVVGICVALVGILFLTIQV 317 (326)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (326)
+......+...+.+.+.++...++.+.++.
T Consensus 409 ~~~~l~~~~l~~~i~~~i~~~~~~~~~~~~ 438 (461)
T KOG3098|consen 409 PYLLLYIYTLGLPIFCVIATTIFFIVAERT 438 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988877777666666666666655554433
No 2
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=99.93 E-value=1e-25 Score=195.50 Aligned_cols=244 Identities=33% Similarity=0.480 Sum_probs=186.6
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhc-CCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc---C------
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNH-KLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK---D------ 70 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~-~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~---~------ 70 (326)
|+|+++.+|+|+|++|+++++|+|+.+.+|+..+ +.+.+..+.+++|.||.+++..+.+||++++.+.. +
T Consensus 113 lVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~s 192 (390)
T KOG3097|consen 113 LVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQRGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGS 192 (390)
T ss_pred hccHHHhhccccccccccCcceecHHHHHHHHhhhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCc
Confidence 6899999999999999999999999999999877 45567778999999999999999999999987542 1
Q ss_pred CCCCCCC-------------C---------chhhHHHHHHHHHHHHHHHH-HccCCccccccchhhhchhhhhHHHHHHH
Q 020441 71 DKGGSTS-------------G---------TTLLFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSK 127 (326)
Q Consensus 71 ~~~~~~~-------------~---------~~~~f~~~~~i~~l~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~k 127 (326)
+++.+++ + .-.+-.+|+.+++++..++. ++..-.+..++. -.+.+..+.+.
T Consensus 193 n~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lvls~i~L~c~via~~~~~~~~~~l~r~~~~r------~~~~~~l~i~~ 266 (390)
T KOG3097|consen 193 NLTFSVECGANFCGSGDKAEGNLTLPPSYVILVLSLIFLPCMVIAVLIMLFFLGALKRYGEKR------LASVSGLNIFQ 266 (390)
T ss_pred cceeeeecccccCCccccccCCccCCCCCceEEeeHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhcccccchHH
Confidence 1111111 1 01122344445555554433 332111111100 11234456677
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHH
Q 020441 128 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG 207 (326)
Q Consensus 128 ~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~ 207 (326)
-++|.++|+|+.+++|++.++|.+++|..++|++.++.|++|++.+|++|.++|+...+.+.+.|.+.+++||. +....
T Consensus 267 l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~-~~~v~ 345 (390)
T KOG3097|consen 267 LTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVACALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRP-PLLVL 345 (390)
T ss_pred HHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCc-cHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999988 57788
Q ss_pred HHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhH
Q 020441 208 GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLS 254 (326)
Q Consensus 208 g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~ 254 (326)
+++.|...... ...|+|.++ +++..++...+||++|+.|+++++
T Consensus 346 gavv~l~li~~-~~~w~~~~~--~~~i~y~~aalwgv~d~vw~t~in 389 (390)
T KOG3097|consen 346 GAVVHLLLITI-LFFWAPNPQ--DSWIFYVAAALWGVGDAVWKTQIN 389 (390)
T ss_pred HHHHHHHHHHH-HHhcccCCC--CceEEEeehhhcCccHHHHHhhcC
Confidence 88888755432 235666542 246678999999999999999875
No 3
>PRK09952 shikimate transporter; Provisional
Probab=99.80 E-value=8.8e-18 Score=159.17 Aligned_cols=286 Identities=12% Similarity=0.131 Sum_probs=162.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc--CCCCCCCCCc
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK--DDKGGSTSGT 79 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~--~~~~~~~~~~ 79 (326)
+..|.++|++.|.+|++..+|+.|..| +++||+..+........|.++|..+...+.. ...+...++|
T Consensus 129 ~~~R~l~G~~~g~~~~~~~~~~~e~~p----------~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gW 198 (438)
T PRK09952 129 VTLRAIQGFAVGGEWGGAALLAVESAP----------KNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGW 198 (438)
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHhCC----------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccCh
Confidence 457999999999999999999999998 4588988888877777777777666544432 1112335799
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCCccccccc--hh-hh-chhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHH
Q 020441 80 TLLFIVFLGVITLGTILMCFLRKEEDKGEKE--TA-DA-SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV 155 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~--~~-~~-~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~ 155 (326)
|.+|.+..++. ++.+++++..+|+++. +. +. +.+++.+..+ .++++|+..+.............+.
T Consensus 199 r~~f~~~~~~~----l~~~~l~~~~~es~~~~~~~~~~~~~~~~~~~~~------~l~~~~~~~~~~~~~~~~~~~~~~~ 268 (438)
T PRK09952 199 RIPFLFSIVLV----LIALWVRNGMEESAEFEQQQHEQAAAKKRIPVIE------ALLRHPGAFLKIIALRLCELLTMYI 268 (438)
T ss_pred HHHHHHHHHHH----HHHHHHHHhCCCChhHHHHHhhcccccccCCHHH------HHHHchHHHHHHHHHHHHHHHHHHH
Confidence 99887543322 2233444333332211 00 00 0001111211 1345666554432222111111111
Q ss_pred Hhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcc-cCCCCCcch
Q 020441 156 WAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINY-SVTSGVLGT 232 (326)
Q Consensus 156 ~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~-~~~~~~~~~ 232 (326)
...+.+.+..+.+|.+ ....+..+.++...++.++.|+++||++||+ .+..+.++........+... ..+. .
T Consensus 269 ~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~----~ 343 (438)
T PRK09952 269 VTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRR-VYITGALIGTLSAFPFFMALEAQSI----F 343 (438)
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHHHHHHHcCCh----H
Confidence 1122223434444543 2334455667778889999999999999985 55555544433222111111 1111 1
Q ss_pred HHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhh-HHHHHHHHHHHHHHHHhhhhhH------HHHHHHHHHHHH
Q 020441 233 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFA-QLKVWQCASIAVVFFIGPYISL------QAMLIVMVVGIC 304 (326)
Q Consensus 233 ~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa-~~~~~~~~g~~i~~~i~~~~~~------~~~~~~~~~~~~ 304 (326)
....+..++.+++.+...+..++++.|.+|.+ +.++.+ .++....+|+++++.+...+.. .....++.+..+
T Consensus 344 ~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~ 423 (438)
T PRK09952 344 WIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCL 423 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 23344456667888888888889999999986 466777 5777777888888888766521 122333444445
Q ss_pred HHHHHHHH
Q 020441 305 VALVGILF 312 (326)
Q Consensus 305 ~~~~~~~~ 312 (326)
++.+..+.
T Consensus 424 i~~v~~~~ 431 (438)
T PRK09952 424 ISAMTALL 431 (438)
T ss_pred HHHHHHHH
Confidence 55555443
No 4
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.80 E-value=1.7e-17 Score=151.34 Aligned_cols=272 Identities=15% Similarity=0.123 Sum_probs=178.9
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
|+.+|++.|+++|..|....++..+..| |+||++..++......+++++|..++.++-+ .+|||
T Consensus 104 Ll~aR~~~g~a~G~f~~i~~~~a~~lvp----------p~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~------~~GWR 167 (394)
T COG2814 104 LLLARALAGLAHGVFWSIAAALAARLVP----------PGKRGRALALVFTGLTLATVLGVPLGTFLGQ------LFGWR 167 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC----------ccchhhHHHHHHHHHHHHHHHhccHHHHHHH------HhhHH
Confidence 4679999999999999999999999999 6799999999999999999999999998854 57899
Q ss_pred hhHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHH--HHHHHHHHHHHHHHHh
Q 020441 81 LLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI--IPLFAYSGLQQAFVWA 157 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll--~p~~~~~g~~~~f~~~ 157 (326)
..|.+..+++.+..+. ...+| |.+.+++ +..+.++ .++++++|+.... .-.+.+.|....|-
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~--------~~~~~~~----~~~~l~~p~v~~~l~~t~l~~~g~F~~ft-- 232 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP-PSEISGS--------LPGPLRT----LLRLLRRPGVLLGLLATFLFMTGHFALYT-- 232 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CccCCCC--------CCcchhH----HHHHhcCchHHHHHHHHHHHHcchhhhHH--
Confidence 9887665555554433 34455 2111111 1122222 3457888877543 22334444443332
Q ss_pred hccccccccccc--chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHH
Q 020441 158 EFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYP 235 (326)
Q Consensus 158 ~~~~~~~~~~lg--~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (326)
+..+ +.++.-| .+.+++++..+|++..+|+.+.||+.|| +.++ .+.....+....... +.+.+++ +...
T Consensus 233 Yi~P-~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~-~l~~~~~l~a~~~l~--l~~~~~~----~~~~ 303 (394)
T COG2814 233 YIRP-FLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRR-ALIAALLLLALALLA--LTFTGAS----PALA 303 (394)
T ss_pred hHHH-HHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchh-HHHHHHHHHHHHHHH--HHHhcch----HHHH
Confidence 2222 2333334 4478999999999999999999999999 6553 444444444433322 2222332 3556
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhh----HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFA----QLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALVGIL 311 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa----~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (326)
++..++||+....-......-+++..||+++.+-+ .+|....+|+.++-.+-.........+.-..+.+++.....
T Consensus 304 ~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 304 LALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHH
Confidence 66677799998887777777777877887755433 66666677777766665554444444554444445554444
Q ss_pred H
Q 020441 312 F 312 (326)
Q Consensus 312 ~ 312 (326)
.
T Consensus 384 ~ 384 (394)
T COG2814 384 L 384 (394)
T ss_pred H
Confidence 3
No 5
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.79 E-value=3.4e-17 Score=154.86 Aligned_cols=286 Identities=14% Similarity=0.127 Sum_probs=151.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc--CCCCCCCCCc
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK--DDKGGSTSGT 79 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~--~~~~~~~~~~ 79 (326)
+..|+++|++.|.+|++..+++.|..| +++||++.++.......|..+|.++...+.. .+.+...++|
T Consensus 128 ~~~R~l~G~g~g~~~~~~~~~i~e~~p----------~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 197 (432)
T PRK10406 128 LLARLFQGLSVGGEYGTSATYMSEVAV----------EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGW 197 (432)
T ss_pred HHHHHHHHhhhhhhHhhHHHHHHHhCC----------CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccch
Confidence 568999999999999999999999998 4689998888776666776666665443322 1112335799
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHH-Hhh
Q 020441 80 TLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV-WAE 158 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~-~~~ 158 (326)
|.+|.+-.+.++ +.++++...+|+++++.++ .++..++++ ++++++..++........ ...++ ...
T Consensus 198 r~~F~i~~~~~l----l~~~~~~~~~e~~~~~~~~-~~~~~~~~~-------l~~~~~~~~~~~~~~~~~-~~~~~~~~~ 264 (432)
T PRK10406 198 RIPFALGAVLAV----VALWLRRQLDETSQQETRA-LKEAGSLKG-------LWRNRRAFIMVLGFTAAG-SLCFYTFTT 264 (432)
T ss_pred HHHHHHHHHHHH----HHHHHHhcCCCCchHHHhh-hcccccHHH-------HHhhHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 998865332222 2333443333322111110 011112322 445666554332221111 11111 112
Q ss_pred cccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCcchHHH
Q 020441 159 FTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYP 235 (326)
Q Consensus 159 ~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l-~~~~~~~~~~~~~~ 235 (326)
+.+.+..+..|.+ +.+....+..+...+++++.|+++||++||+ .+..+.++.......... ....+. +...
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 339 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRT-SMLCFGSLAALFTVPILSALQNVSS----PYAA 339 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchH-HHHHHHHHHHHHHHHHHHHHHcCCc----HHHH
Confidence 2233444444543 5666677777777888999999999999885 444433322222111111 111111 1222
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhh-HHHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHH
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFA-QLKVWQCASIAVVFFIGPYISL----QAMLIVMVVGICVALVG 309 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa-~~~~~~~~g~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~ 309 (326)
+....+.+++.+...+..+++..|.||++ |.++.+ .+.....+++...+.+...+.. ....++..+..+++.++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~~g~~~~~~~~~~~~~~i~~~~ 419 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKSIGMETAFFWYVTLMAVVAFLV 419 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHH
Confidence 22222222233334455677889999986 677888 5555555444445555444421 11223334445555555
Q ss_pred HHHHHH
Q 020441 310 ILFLTI 315 (326)
Q Consensus 310 ~~~~~~ 315 (326)
.+.++.
T Consensus 420 ~~~l~~ 425 (432)
T PRK10406 420 SLMLHR 425 (432)
T ss_pred HHHhhh
Confidence 544443
No 6
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.75 E-value=2.2e-16 Score=151.73 Aligned_cols=266 Identities=11% Similarity=0.038 Sum_probs=147.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc--CCCCCCCCCc
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK--DDKGGSTSGT 79 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~--~~~~~~~~~~ 79 (326)
+..|+++|++.|+++++..++++|..| +++||+..++.......|..+|+.+...+.. .......+||
T Consensus 122 ~~~R~l~G~g~g~~~~~~~~~~~e~~p----------~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gW 191 (490)
T PRK10642 122 LLCKMAQGFSVGGEYTGASIFVAEYSP----------DRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGW 191 (490)
T ss_pred HHHHHHHHhHhHhhHHHHHHHHHHhCC----------CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccH
Confidence 568999999999999999999999998 4689999998877777888888877654422 1122345899
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCCcccc-ccchhhh--c----hhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHH
Q 020441 80 TLLFIVFLGVITLGTILMCFLRKEEDKG-EKETADA--S----VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQ 152 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~~~l~~~~~~~-~~~~~~~--~----~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~ 152 (326)
|.+|.+...+++++.++...+|++++.. +.++.++ + +.++.++++.++ ++++..+.... .......
T Consensus 192 R~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~~~ 264 (490)
T PRK10642 192 RIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIAT------KHWRSLLTCIG-LVIATNV 264 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHH------HhHHHHHHHHH-HHHHHHH
Confidence 9988764433333333223333221100 0000000 0 011122333221 23333332211 1111111
Q ss_pred HHH-Hhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 020441 153 AFV-WAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV 229 (326)
Q Consensus 153 ~f~-~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~ 229 (326)
.++ ...+.+.+..+..|.+ ..+.......++..++.++.|+++||+|||+ .+..+.+.........+.....+.
T Consensus 265 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~-- 341 (490)
T PRK10642 265 TYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRP-FVILGSVALFVLAIPAFILINSNV-- 341 (490)
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHhCCC--
Confidence 111 1122333444444543 4455566677788899999999999999995 555554332221111111111111
Q ss_pred cchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhh-HHHHHHHHHHHHHHHHhhhh
Q 020441 230 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFA-QLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 230 ~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa-~~~~~~~~g~~i~~~i~~~~ 290 (326)
....++..++.|++.+...+....++.+++|++ |..+.+ .+++....| .+++.+..++
T Consensus 342 --~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g-~~~p~i~g~l 401 (490)
T PRK10642 342 --IGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVA-GLTPTLAAWL 401 (490)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 133344455667766666777778888999987 566788 577765444 4555444444
No 7
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.74 E-value=4.4e-16 Score=142.77 Aligned_cols=262 Identities=15% Similarity=0.078 Sum_probs=169.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+++..+++.|..++ ++|++..|+.....+++.++|+.++..+.. ..+||.
T Consensus 96 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~g~~~ 159 (365)
T TIGR00900 96 YVLAGILAIAQAFFTPAYQAMLPDLVPE----------EQLTQANSLSQAVRSLFYIVGPGIGGLMYA------TLGIKW 159 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCH----------HHHHHHHhHHHHHHHHHHHHHHHHHHHHHH------HhhHHH
Confidence 4679999999999999999999999984 589999999999999999999999877653 246887
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.|.+..+..++..++..+++.++++++++ ++.+++..++.++. ..+++++|+...+....+............+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (365)
T TIGR00900 160 AIWVDAVGFAISALLIVSVRIPELAASEI-QALSNAVLRDTREG---IKFVLKNPLLRTLLLLALLFNLVFAPAIVALFP 235 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCccc-cccchhHHHHHHhH---HHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 77655444444444444454433322111 11000111112222 223456777655443322222221111111122
Q ss_pred ccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHH
Q 020441 162 EIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMA 239 (326)
Q Consensus 162 ~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (326)
.+.++.+|. .+.+......+++..++.++.|++.||++|++ ++..+.......... +.+.+++ .+..++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~ 308 (365)
T TIGR00900 236 YVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMA-LMTGAIFVIGLAILV--VGLTPPN----FPLFLVLW 308 (365)
T ss_pred HHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhH-HHHHHHHHHHHHHHH--HHhhchh----HHHHHHHH
Confidence 233333443 46788888899999999999999999998885 555444333332222 1122211 24566778
Q ss_pred HHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 240 ALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 240 ~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.|++.+..++...+++.+..|++ +..+++.++..+.+|..+++.+...+
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 309 FAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999876 56789999999999999998887654
No 8
>PRK15075 citrate-proton symporter; Provisional
Probab=99.73 E-value=4.7e-16 Score=147.20 Aligned_cols=264 Identities=14% Similarity=0.087 Sum_probs=149.1
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCC--CCCCCCc
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK--GGSTSGT 79 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~--~~~~~~~ 79 (326)
+.+|+++|++.|..|++...+++|..| +++||+..++.....+.+..+|+.++..+...-. ..+.++|
T Consensus 121 ~~~R~l~G~~~g~~~~~~~~~~~e~~p----------~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gW 190 (434)
T PRK15075 121 LLGRLLQGFSAGVELGGVSVYLAEIAT----------PGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGW 190 (434)
T ss_pred HHHHHHhhccccccHHHHHHHHHhhCC----------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccch
Confidence 568999999999999988899999999 4699999999888888888888777765532110 1134689
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHH-Hhh
Q 020441 80 TLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV-WAE 158 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~-~~~ 158 (326)
|.+|.+.. +..++.+++++..+|+++...++ ++.+.++.+++ ..++++............ ...++ ...
T Consensus 191 r~~f~~~~----~~~~~~~~~~~~~~e~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 259 (434)
T PRK15075 191 RIPFLIGC----LIVPFIFLIRRSLEETEEFLARK---HRPSMREIFRS---LAANWRIVLAGMLMVAMT-TVSFYLITV 259 (434)
T ss_pred HHHHHHHH----HHHHHHHHHHHhcCCCHHHHHhh---hccccccHHHH---HHHhHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 98886422 22233334443333322100010 11112222222 234444332221111111 11111 122
Q ss_pred cccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHH
Q 020441 159 FTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 236 (326)
Q Consensus 159 ~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~ 236 (326)
+.+.+.++..|.+ +.++...+++++..+++++.|+++||++||+ ....+..+......+.+....++++ .....
T Consensus 260 ~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 335 (434)
T PRK15075 260 YTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRP-VLIAFTVLAILTAYPALSWLVAAPS---FARML 335 (434)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-HHHHHHHHHHHHHHHHHHHHHcCCc---hHHHH
Confidence 2334444444543 5677778888999999999999999999986 5444333222211111111111111 12222
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhH-HHHHHHHHHHHHHHHhhhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQ-LKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~-~~~~~~~g~~i~~~i~~~~ 290 (326)
...++.+++.+..++.......|.+|++ +..+++. +++.+.+++++++.+...+
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i 391 (434)
T PRK15075 336 AVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWL 391 (434)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHH
Confidence 3334456667777776777889999976 5667874 5666666666777666544
No 9
>PRK03545 putative arabinose transporter; Provisional
Probab=99.72 E-value=2.2e-15 Score=140.54 Aligned_cols=270 Identities=16% Similarity=0.114 Sum_probs=166.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..++...+++.+..| +++|++..|+.......+..+|+.++..+.. ..+||.
T Consensus 101 ~~~r~~~G~~~~~~~~~~~~~i~~~~~----------~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~------~~gw~~ 164 (390)
T PRK03545 101 LISRIGIAFAHAIFWSITASLAIRVAP----------AGKKAQALSLLATGTALAMVLGLPLGRVIGQ------YLGWRT 164 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC----------hhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH------HhcHHH
Confidence 567999999999999988888888888 4589999999988889999999988876543 246898
Q ss_pred hHHHHHHHHHHHHHHHH-HccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHH-HHHHHHHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p-~~~~~g~~~~f~~~~~ 159 (326)
.|.+..++.++..++.. ++|++++++ + .+. ++..+.++||+...... .++........ ....
T Consensus 165 ~f~~~~~~~~l~~~~~~~~~~~~~~~~--~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 228 (390)
T PRK03545 165 TFLAIGGGALITLLLLIKLLPLLPSEH--S---------GSL----KSLPLLFRRPALVSLYLLTVVVVTAHFTA-YSYI 228 (390)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCC--c---------chH----HHHHHHHhCcHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 88777655555443332 343321111 0 011 12233567776543221 11111111111 1111
Q ss_pred ccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 160 TKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 160 ~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
+ .+..+..|. +..+..+.+.+++..+++++.|++.||+++|. +.....+. ...... .....++ +....+
T Consensus 229 ~-~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~~-~~~~~~-l~~~~~~-----~~~~~~ 299 (390)
T PRK03545 229 E-PFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-LLIAIALL-LVCLLL-LLPAANS-----EWHLSV 299 (390)
T ss_pred H-HHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHH-HHHHHH-HHHHhch-----HHHHHH
Confidence 1 122333443 36778888899999999999999999998774 43332222 222211 1122222 244566
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHHHHH
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILF 312 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~ 312 (326)
..+++|++.....+.....+.+..|+++..+.+.+.....+|..+++.+...+. .....+...++.+++.+....
T Consensus 300 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 378 (390)
T PRK03545 300 LSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSIL 378 (390)
T ss_pred HHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHH
Confidence 788889988777777777888888877766777777777777777777776553 333344444445555555433
No 10
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.71 E-value=2.3e-15 Score=139.31 Aligned_cols=265 Identities=14% Similarity=0.097 Sum_probs=157.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc--CCCCCCCCCc
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK--DDKGGSTSGT 79 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~--~~~~~~~~~~ 79 (326)
+.+|+++|++.+..+++..+++.|..+ +++|++..++.......|.++|+++...+.. .......++|
T Consensus 100 ~~~r~l~G~~~~~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w 169 (394)
T TIGR00883 100 LLARLIQGFSLGGEWGGAALYLAEYAP----------PGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGW 169 (394)
T ss_pred HHHHHHHHhhccccccccHHHhhhcCC----------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccch
Confidence 467999999999999999999999888 4689999999988888898888887765532 1111235789
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchh--hHHHHHHHHHHHHHHHHHHh
Q 020441 80 TLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR--MLLIIPLFAYSGLQQAFVWA 157 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~--~lll~p~~~~~g~~~~f~~~ 157 (326)
|.+|.+..++..++..+...++++++++++ +++++..+.+.++ .+++++ .+......+......... .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 239 (394)
T TIGR00883 170 RIPFLVSAVLVLIGLYLRRNLEETPVFEKA--QEKHKKKRGPIRE-------TLTKHRKPFLLGLGLVIATTTTFYLI-T 239 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCChhHHHH--HhccccccCCHHH-------HHHhchHHHHHHHHHHHHHHHHHHHH-H
Confidence 988876544443333332333322111111 1111111122322 333433 322221221111111111 1
Q ss_pred hcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHH-HHHHHHHHHHhcccCCCCCcchHH
Q 020441 158 EFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI-AQVVVFLWILINYSVTSGVLGTLY 234 (326)
Q Consensus 158 ~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i-~~~~~~~~~~l~~~~~~~~~~~~~ 234 (326)
.+.+.+..+..|. ++.+......++...++.++.|++.||++||+ .+..+.. ..............+++ ...
T Consensus 240 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 314 (394)
T TIGR00883 240 TYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRP-VLIIFTVLAALLAVPLLMALLDSGS----FTL 314 (394)
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHHHHHHhcCCc----hHH
Confidence 2222333333443 36777788889999999999999999999885 4433322 22222111111111121 244
Q ss_pred HHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhh-HHHHHHHHHHHHHHHHhhhhh
Q 020441 235 PLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFA-QLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 235 ~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa-~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+...++.|++.+..++..++.+.+.+|++ +..+++ .+.....+|..+++.+...+.
T Consensus 315 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~ 373 (394)
T TIGR00883 315 FFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALV 373 (394)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHH
Confidence 455567778888888899999999999976 566777 467777788888888876553
No 11
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.70 E-value=2.9e-15 Score=143.31 Aligned_cols=271 Identities=15% Similarity=0.070 Sum_probs=151.1
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCC--CCCCCCCc
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD--KGGSTSGT 79 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~--~~~~~~~~ 79 (326)
+.+|+++|++.|..++...+++.|..|+ ++||+..|+......+|..++.+++..+.... .....++|
T Consensus 124 ~~~R~l~G~~~g~~~~~~~~~i~e~~~~----------~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gW 193 (479)
T PRK10077 124 VIYRIIGGIGVGLASMLSPMYIAEIAPA----------HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGW 193 (479)
T ss_pred HHHHHHHhhhHhHHhhHHHHHHHhhCCh----------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCCh
Confidence 5789999999999999999999999994 58999999988777888888777766554321 11235789
Q ss_pred hhhHHHHHHHHHHHHHHHHHccCCccc----cccchhhh-----c-hhhhhHHHHHHHHHHHh--hcchhhHHHHHHHHH
Q 020441 80 TLLFIVFLGVITLGTILMCFLRKEEDK----GEKETADA-----S-VNFYSYLVSLSKSITTL--LADVRMLLIIPLFAY 147 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~~~l~~~~~~----~~~~~~~~-----~-~~~~~~~~~~~k~~~~~--~~~~~~lll~p~~~~ 147 (326)
|.+|.+..+.+++..+..+++|++.+. .++++.++ . ..+.....++.++..+. .++++.+......+.
T Consensus 194 r~~f~~~~~~~~~~~~~~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (479)
T PRK10077 194 RYMFASEAIPALLFLMLLYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIV 273 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHH
Confidence 998887665566655556677654321 11110000 0 00000111111222110 011111111111111
Q ss_pred HH-----HHHHH--H-Hhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH
Q 020441 148 SG-----LQQAF--V-WAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 217 (326)
Q Consensus 148 ~g-----~~~~f--~-~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~ 217 (326)
.+ +.+.. . ..++.+.+. ...|.+ .........++...++.++.|++.||+|||+ ++..+.++.....+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~p~i~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~-~~i~~~~~~~v~~~ 351 (479)
T PRK10077 274 IGVMLSVFQQFVGINVVLYYAPEIF-KTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKP-LQIIGALGMAIGMF 351 (479)
T ss_pred HHHHHHHHHHHhChhHHHHHHHHHH-HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChH-HHHHhHHHHHHHHH
Confidence 11 11110 0 011112111 123432 3455667788889999999999999999985 66666655544432
Q ss_pred HHHh-cccCCCCCcchHHHHHHHHHHhhhhHH-hhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 218 WILI-NYSVTSGVLGTLYPLIMAALLGIGDGV-LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 218 ~~~l-~~~~~~~~~~~~~~~~~~~l~G~~d~~-~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
...+ ...+.. ........++++.+.+. +.+..+.++.|.+|++ |..+.+.....+.+|..++..+.+
T Consensus 352 ~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 352 SLGTAFYTQAP----GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred HHHHHHhcCcc----cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 2211 111211 12222233344444432 4467789999999965 677888888888777777655544
No 12
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.70 E-value=8.5e-15 Score=137.76 Aligned_cols=256 Identities=10% Similarity=-0.035 Sum_probs=159.7
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+...++..+++.+..+ +++|++..++.....+++..+|+.++..+... .+|+.
T Consensus 114 ~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~------~~~~~ 177 (417)
T PRK10489 114 YLLGLWDGFFGSLGVTALLAATPALVG----------RENLMQAGAITMLTVRLGSVISPALGGLLIAA------GGVAW 177 (417)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccC----------HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH------HhhHH
Confidence 357888999988888887777777777 35889999999888899999999988766432 24555
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.|.+..+..++..++.+.+|+..++++++ + ++.++.++.. ...+++|+........+......++. . +.+
T Consensus 178 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~---~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~p 247 (417)
T PRK10489 178 NYGLAAAGTFITLLPLLRLPALPPPPQPR--E---HPLRSLLAGF---RFLLASPVVGGIALLGGLLTMASAVR-V-LYP 247 (417)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCccc--c---cchHHHHHHH---HHHHcChHHHHHHHHHHHHHHHHhHH-H-hhH
Confidence 56554444444444445555322111110 0 1111222222 22456666543322222111111111 1 222
Q ss_pred ccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHH
Q 020441 162 EIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMA 239 (326)
Q Consensus 162 ~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (326)
.+..+.+|. ...++.....+++..+++++.|++.||.++++ .+..+.+.....+++ +...++ .....+..
T Consensus 248 ~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~-~l~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~ 319 (417)
T PRK10489 248 ALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGL-LMLLSTLGSFLAVGL--FGLMPM-----WILAVLCL 319 (417)
T ss_pred HHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcch-HHHHHHHHHHHHHHH--HHccch-----HHHHHHHH
Confidence 344444454 46788888999999999999999999866553 444554444433322 223333 24456677
Q ss_pred HHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 240 ALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 240 ~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+++|++.+..++...+++.+..|++ +..+++.++..+.+|..++..+...+.
T Consensus 320 ~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 320 ALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 8889988888888889999999976 577888888888888888888887664
No 13
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.69 E-value=6.9e-15 Score=137.69 Aligned_cols=257 Identities=12% Similarity=-0.001 Sum_probs=156.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..++....++.|..+ +++|++..|++......+..+|+.++..+.. ..+||.
T Consensus 107 ~~~~~l~G~~~~~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~ 170 (406)
T PRK11551 107 LVARLLTGVGLGGALPNLIALTSEAVG----------PRLRGTAVSLMYCGVPFGGALASVIGVLAAG------DAAWRH 170 (406)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc------ccCHHH
Confidence 568999999999999888888899887 3589999999998888888888887754432 246888
Q ss_pred hHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
.|.+..++.++..++ ..++|++.+++++++.+ .++++..+. .++..++++...+....+..... .+....+.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 243 (406)
T PRK11551 171 IFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAG---KQRAPVLRA---LFGEGRATATLLLWISYFFTLIV-LYFLLNWL 243 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhHHhccCcc---hhhhhhHHH---HhhhhhhhHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 777655444444333 34455433221111000 011111111 11111112222111111111111 11111111
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+.+..+ .|. ...+......+++..+++++.|++.||+++|+ .+..+.+........ +...++ .....+.
T Consensus 244 p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~ 314 (406)
T PRK11551 244 PSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRR-VVLLIYAGILASLAA--LAAAPS-----FAGMLLA 314 (406)
T ss_pred HHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHH--HHhcCc-----HHHHHHH
Confidence 222222 343 46778888899999999999999999999885 554443333333221 122233 2345566
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.++.|++.+..++..+++..+.+|++ +..+.+.++....+|..+++.+...+
T Consensus 315 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l 367 (406)
T PRK11551 315 GFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQL 367 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhh
Confidence 77888888888888999999999976 57788889999999999998888766
No 14
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.68 E-value=4.5e-15 Score=137.08 Aligned_cols=266 Identities=15% Similarity=0.013 Sum_probs=156.3
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+++...++.|..| +++|++..|+.....+.+..+|+.++..+... .+||.
T Consensus 86 ~~~~~l~g~~~~~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~------~~~~~ 149 (399)
T TIGR00893 86 YILRVLLGAAEAPFFPGIILIVASWFP----------ASERATAVSIFNSAQGLGGIIGGPLVGWILIH------FSWQW 149 (399)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHhCC----------HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh------CCchH
Confidence 568999999999999999999999988 45899999999999999999999888766542 35887
Q ss_pred hHHHHHHHHHHHHHHHH-HccCCcccccc-chhhhc---hh------hhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 020441 82 LFIVFLGVITLGTILMC-FLRKEEDKGEK-ETADAS---VN------FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGL 150 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~-~l~~~~~~~~~-~~~~~~---~~------~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~ 150 (326)
.|.+..++.++..++.. ++|+++++++. ++++++ .. ++.+.++..++..+.+++|+........+....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (399)
T TIGR00893 150 AFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNI 229 (399)
T ss_pred HHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHh
Confidence 77765544444444333 34433221110 000000 00 000000011123345677776554433222222
Q ss_pred HHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHH----HHHHHHHHHHH-hcc
Q 020441 151 QQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA----IAQVVVFLWIL-INY 223 (326)
Q Consensus 151 ~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~----i~~~~~~~~~~-l~~ 223 (326)
....... +.+.+..+..|. .+.+......++...+++++.|++.||++||+....... .......+... ...
T Consensus 230 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (399)
T TIGR00893 230 GLGFFLT-WFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNY 308 (399)
T ss_pred HHHHHHH-HHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhcc
Confidence 2221211 222344444454 366778888899999999999999999987731111111 11111111111 121
Q ss_pred cCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 224 SVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 224 ~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.++ ....+.....+.......+...++..+.+|++ +..+++.++..+.+|..+++.+...+
T Consensus 309 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l 370 (399)
T TIGR00893 309 VNI------PYAALALVALGFFGLGAGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAI 370 (399)
T ss_pred chh------HHHHHHHHHHHHhchhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhh
Confidence 111 22222233333333337788899999999976 56788999999999999998888765
No 15
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.68 E-value=5.6e-15 Score=135.90 Aligned_cols=257 Identities=12% Similarity=0.031 Sum_probs=154.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|.++|++.+..+.....++.+..+ ++|++..+++......+..+++.+...+.. ..+||.
T Consensus 95 ~~~~~~~g~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~ 157 (377)
T TIGR00890 95 YLTYGLASAGVGIAYGIALNTAVKWFP-----------DKRGLASGIIIGGYGLGSFILSPLITSVIN------LEGVPA 157 (377)
T ss_pred HHHHHHHhHHHHHHHHhHHHHHHHHcC-----------cccHHHHHHHHHhcchhHhHHHHHHHHHHh------cccHHH
Confidence 467899999999888766555555444 478999999988888887765554443322 246898
Q ss_pred hHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
.|.+..++.++..+. .++++++++++++++++. ..++ ++..+.+++++..++...++..........+.++
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (377)
T TIGR00890 158 AFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEV-SVKD-------YTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYK 229 (377)
T ss_pred HHHHHHHHHHHHHHHHHHheecCchhccccCccc-chhh-------hhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 887766555554433 344544333221110110 0111 1223356677665443332222222111112111
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
.+. +.+|. +..+....+.++...+++++.|++.||++||+ .+..+.+.......+.. ..++.+ ....+..
T Consensus 230 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~ 301 (377)
T TIGR00890 230 -PYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQK-TMSIVFGISAVGMAAML--FIPMLN---DVLFLAT 301 (377)
T ss_pred -HHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHHHH--Hcccch---hHHHHHH
Confidence 121 22343 35677788899999999999999999999885 55555555444333222 222210 1223344
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.++.|++.+...+..+++..+.+|++ +..+++.++....+|..+++.+...+.
T Consensus 302 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 355 (377)
T TIGR00890 302 VALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHAL 355 (377)
T ss_pred HHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 56677777777777788899999876 467888999999999999998877653
No 16
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.66 E-value=7e-14 Score=131.04 Aligned_cols=258 Identities=14% Similarity=0.057 Sum_probs=153.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..+....+++.|..+ +++|++..++.......+..+|+.++..+... .+||.
T Consensus 105 ~~~~~l~G~~~~~~~~~~~~~i~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~------~~w~~ 168 (406)
T PRK15402 105 TLLRFLQGIGLCFIGAVGYAAIQESFE----------EADAIKITALMANVALLAPLLGPLVGAALIHV------LPWRG 168 (406)
T ss_pred HHHHHHHHhHhhhHHHHHHHHHHHHhC----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCccH
Confidence 467999999999888777777777766 35778888888877788889998887665432 36887
Q ss_pred hHHHHHHHHHHHHHHHH-HccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMC-FLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
.|.+..++.++..+... .+|+++++++ + + .+.++..++..++++||+...+.......+.....+. .+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 238 (406)
T PRK15402 169 MFVLFAALAALSFFGLWRAMPETAGRVG-E---K-----LSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWI-ALS 238 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcccc-c---c-----ccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHH-HHh
Confidence 78766555555444332 3333221111 1 0 0111222233346778886654433322222111111 111
Q ss_pred cccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHh-c-ccCCCCCcchHHHH
Q 020441 161 KEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-N-YSVTSGVLGTLYPL 236 (326)
Q Consensus 161 ~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l-~-~~~~~~~~~~~~~~ 236 (326)
+.+..+..|.+ +.+.......++..++.++.|++.||+++|+ .+..+.++.......... . ..+.. ....+
T Consensus 239 p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~~ 313 (406)
T PRK15402 239 PVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRS-LIRMGLWPMVAGLLLAALATVISSHA----YLWLT 313 (406)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHHHHHccccc----HHHHH
Confidence 22333334443 4566666667778889999999999999885 555565544433222111 1 11111 23345
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+..+++|++.+...+..+.......|+++....+.+++.+.+|.+++..+...+
T Consensus 314 ~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l 367 (406)
T PRK15402 314 AGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHA 367 (406)
T ss_pred HHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 566778888887776655554444455566678888998888888888887765
No 17
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.65 E-value=6.2e-14 Score=129.86 Aligned_cols=254 Identities=15% Similarity=0.058 Sum_probs=154.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..+++..+++.|..| +++|++..|+.....+.+..+|+.++..+.. ..+||.
T Consensus 97 ~~~~~l~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~~~~~ 160 (385)
T TIGR00710 97 LVLRFVQAFGASAGSVISQALVRDIYP----------GEELSRIYSILMPVLALAPAVAPLLGGYILV------WLSWHA 160 (385)
T ss_pred HHHHHHHHcchhHHHHHHHHHHHHhcC----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcCHHH
Confidence 467999999999999998889988888 4589999999999999999999988876643 246887
Q ss_pred hHHHHHHHHHHHHHHHHH-ccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHH-HHHHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~-~~g~~~~f~~~~~ 159 (326)
.|.+..++..+..++..+ +|+++++++++ +. ++..++..+.+++|+......... ..+....+ ..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 228 (385)
T TIGR00710 161 IFAFLSLAGILLSALIFFILPETLPYEARI-------QI---STYFETFLLLLKSKMFWGYALIYGASFGGFFAF--FSG 228 (385)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcccC-------CH---HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH--HHc
Confidence 777655545444444333 33322111110 01 111122334567777654432211 11111111 112
Q ss_pred ccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCcchHHHH
Q 020441 160 TKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPL 236 (326)
Q Consensus 160 ~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l-~~~~~~~~~~~~~~~ 236 (326)
.+.+..+..|. +..+......+++..+++++.|++.||+++|+ .+..+..+.......... ...+.+. ....+
T Consensus 229 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 304 (385)
T TIGR00710 229 APFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKS-LLRMGLILFAVSAVLLEITAILGLGS---WAMII 304 (385)
T ss_pred ChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHHHHHhccch---HHHHH
Confidence 22233333343 46788888889999999999999999999885 544454443332221111 1111110 13344
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHH-HHHHHHHHh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCA-SIAVVFFIG 287 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~-g~~i~~~i~ 287 (326)
...++.|++.+...+.......+.+|+++..+.+.++..+.. |+..++.++
T Consensus 305 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 305 GPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 556778888888888888888888887777788877766654 444455444
No 18
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.65 E-value=1.7e-15 Score=138.36 Aligned_cols=257 Identities=18% Similarity=0.188 Sum_probs=157.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+++...++.|..+ +++|++.+|+.....+.|..+|+.++..+.. ..+||.
T Consensus 89 ~~~~~l~g~~~~~~~~~~~~~i~~~~~----------~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~~~~~ 152 (352)
T PF07690_consen 89 LIARFLLGIGSGFFSPASNALIADWFP----------PEERGRAFGILSAGFSLGSILGPLLGGFLIS------YFGWRW 152 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCC----------TCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC------HCHHCC
T ss_pred hhhccccccccccccccccccccccch----------hhhhhhccccccchhhhhhhcccchhhhhhh------cccccc
Confidence 578999999999999999999999998 4689999999999999999999999887653 235887
Q ss_pred hHHHHHHHHHHHHHHH-HHccCCccccccchhhhc-hhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTILM-CFLRKEEDKGEKETADAS-VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~ 159 (326)
.|.+..++.++..++. ++++++++++++++.+++ .+++.++++..| +.+++|....+....+..++..... ..+
T Consensus 153 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 228 (352)
T PF07690_consen 153 AFLISAILSLIAAILFILFLPEPPPPRERESPKESESKKPKPLKPGFK---SLFKNPVLWILLIAFFLFFFVFSGF-SFF 228 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--HHHCCCH-CT---HHHHHHCCHHHHHHHHHHHHHHHHH-HHH
T ss_pred ccccccchhhhhhhhHhhhhhhcccccccccccccccccccccccccc---cccccchhhhhhhhhhHHHHHHHHh-hcc
Confidence 7877766666655532 334333332221111111 001112211111 1223443321111222222111111 111
Q ss_pred ccccccccccc---hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCCcchHHH
Q 020441 160 TKEIVTPALGV---SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYP 235 (326)
Q Consensus 160 ~~~~~~~~lg~---~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l~~~~~~~~~~~~~~ 235 (326)
.+.+..+..|. ...+....+.++...+++++.|++.||+++++ ................. ....++ +...
T Consensus 229 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 302 (352)
T PF07690_consen 229 LPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRR-RLLIAILLLILGALGLLLLPFSSS-----PVWL 302 (352)
T ss_dssp HHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHHHHHHHHHHCCSHHHCH-----HHHH
T ss_pred cchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHHHhhh-----HHHH
Confidence 11232333333 35677788889999999999999999998764 33333322222222111 112211 2445
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHH
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF 284 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~ 284 (326)
+...+++|++.+..++....+..+..|++ +..+.+.++..+++|..+++
T Consensus 303 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 303 IIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 56778899999999999999999999866 46789999999999998875
No 19
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.65 E-value=1.1e-13 Score=129.28 Aligned_cols=257 Identities=15% Similarity=0.103 Sum_probs=157.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..+++..+++.|..| |++|++.+|+.....+.+.++|+.++-.+... .|+.
T Consensus 92 ~~~r~l~G~~~a~~~pa~~a~i~~~~~----------~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-------~~~~ 154 (393)
T PRK11195 92 LLAYGLVGIGAAAYSPAKYGILTELLP----------GEKLVKANGWMEGSTIAAILLGTVLGGALADP-------HAEA 154 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHH
Confidence 357899999999999999999999998 46899999999999899999999998666431 2554
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHH-HHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~-~~~~g~~~~f~~~~~~ 160 (326)
.+.+...+.+++.+..+++|+++.++++.+.+ .......+++.. ..++++|+....... .+..+....... .+
T Consensus 155 ~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 228 (393)
T PRK11195 155 ALAVCALIYLLAALFNLFIPRLGARRPGQSWN-PIALLRDFFHAC---RVLWRDKLGRFSLAGTTLFWGAGATLRF-LV- 228 (393)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcccccccCCC-HHHHHHHHHHHH---HHHHhCchhHHHHHHHHHHHHHHHHHHH-HH-
Confidence 45433322233333345565433221111000 000011222222 234566664432211 111121111111 11
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
..+..+.+|. .+.|+.+...+++..++++..+|+.||.++++ ++..+..... .... +...++ ++...+.
T Consensus 229 ~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~-~~~~g~~~~~-~~~~--~~~~~~-----~~~~~~~ 299 (393)
T PRK11195 229 LAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLR-VLPAGILMGL-VVLL--MALQHS-----LLPAYPL 299 (393)
T ss_pred HHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc-hHHHHHHHHH-HHHH--HHHHhH-----HHHHHHH
Confidence 1123333444 37888899999999999999999999888774 5555543322 1111 122222 2444566
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCc--hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~--~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+++|++.+..++..++.+.+.-|++. ..+++..++.+.+|..++..+...+
T Consensus 300 ~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 300 LILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred HHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 778899999888888888887766543 5578889999999988888887655
No 20
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.64 E-value=2.7e-14 Score=136.50 Aligned_cols=267 Identities=10% Similarity=-0.068 Sum_probs=149.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.|..|++...++.+..| +++||+.+|++....++|..+|+.++..+..... ..+||.
T Consensus 126 ~~~r~l~G~~~~~~~~~~~~~i~~~~~----------~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~---~~~~~~ 192 (467)
T PRK09556 126 IALWALSGFFQSTGGPCSYSTITRWTP----------RRKRGRFLGFWNISHNLGGAGAGGVALWGANYFF---DGHVIG 192 (467)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHcC----------ccceeeeEEeeecccchhhhHHHHHHHHHHHhhc---cCcchh
Confidence 567999999999999998899999988 4689999999988888999999888755433210 124776
Q ss_pred hHHHHHHHHHHHHHHH-HHccCCccc-c--ccch-------hhhch--hhhhHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 020441 82 LFIVFLGVITLGTILM-CFLRKEEDK-G--EKET-------ADASV--NFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 148 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~-~~l~~~~~~-~--~~~~-------~~~~~--~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~ 148 (326)
.|.+..+++++..++. +++++++++ . ++++ .+++. .++.+.++.+++ +.++||+...+....+..
T Consensus 193 ~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~ 270 (467)
T PRK09556 193 MFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVE--YVLKNPVIWLLCFANIFL 270 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHH--HHHcChHHHHHHHHHHHH
Confidence 6655444444333333 334432211 0 0000 00000 001111221111 256777765544222211
Q ss_pred HHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCC
Q 020441 149 GLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 226 (326)
Q Consensus 149 g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~ 226 (326)
..... ....+.+.|..+..|.+ +.+....+..++..++.++.|+++||++||+ .+...............+...++
T Consensus 271 ~~~~~-~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~ 348 (467)
T PRK09556 271 YIVRI-GIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR-ALVACIALALIIFTLGVYQHATS 348 (467)
T ss_pred HHHHH-HHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-hHHHHHHHHHHHHHHHHHHhcCc
Confidence 11110 01122334544455553 6677777888889999999999999999875 33332222221111111122222
Q ss_pred CCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHH-HHHHHHHHhhhh
Q 020441 227 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCA-SIAVVFFIGPYI 290 (326)
Q Consensus 227 ~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~-g~~i~~~i~~~~ 290 (326)
+...++..++.|++........+....+.+|++ +..+.+..+....+ |.++++.+..++
T Consensus 349 -----~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i 409 (467)
T PRK09556 349 -----EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMI 409 (467)
T ss_pred -----HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHH
Confidence 233445556667554444444445666889876 47788888888776 555555444433
No 21
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.64 E-value=1e-13 Score=129.60 Aligned_cols=249 Identities=11% Similarity=0.053 Sum_probs=153.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.|..++...+++.|..+ +++|++..++.++..+.+..+|+.++..+.. .++||.
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~----------~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~------~~gw~~ 175 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVP----------PRTVPKALSVIFGAVSIALVIAAPLGSFLGE------LIGWRN 175 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcC----------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcCHHH
Confidence 568999999999999998888888887 4689999999999999999999999987753 247898
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHH-HHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~-~~~~g~~~~f~~~~~~ 160 (326)
.|.+..++.++..+.. ..+.|+++++++ + ..+ +..+.+++|+....... +.......++ ...++
T Consensus 176 ~f~~~~~l~~~~~l~~-~~~~p~~~~~~~--~----~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 240 (394)
T PRK10213 176 VFNAAAVMGVLCIFWI-IKSLPSLPGEPS--H----QKQ-------NTFRLLQRPGVMAGMIAIFMSFAGQFAF-FTYIR 240 (394)
T ss_pred HHHHHHHHHHHHHHHH-HHHCCCCCcccc--c----chh-------HHHHHhcCHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 8876544333322221 111122111110 0 011 12345677776553322 1211111111 12222
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+.+. +..|. +..+.....++++..+++++.|++.||.+++ .++....+.......+. .+.++ ++...+.
T Consensus 241 p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-~l~~~~~~~~~~~~~l~--~~~~~-----~~~~~~~ 311 (394)
T PRK10213 241 PVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-ALAGAPLVLAVSALVLT--LWGSD-----KIVATGV 311 (394)
T ss_pred HHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-HHHHHHHHHHHHHHHHH--HHhhh-----HHHHHHH
Confidence 2222 22343 4678888899999999999999999996544 23332222222222211 12222 2455667
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+++|++.+..++...+.+.+..|++...+.+.+....++|..++..+...+
T Consensus 312 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l 363 (394)
T PRK10213 312 AIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYA 363 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999889888887654455555556666777777666655
No 22
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.64 E-value=3e-14 Score=134.21 Aligned_cols=261 Identities=12% Similarity=0.071 Sum_probs=144.7
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.|..+++...+++|..+ +++|++..|++.....+|.++|+.+...+.. ..+||.
T Consensus 110 ~~~r~l~G~g~g~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~------~~~w~~ 173 (426)
T PRK12307 110 TLSRFIVGMGMAGEYACASTYAVESWP----------KHLKSKASAFLVSGFGIGNIIAAYFMPSFAE------AYGWRA 173 (426)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhCC----------HhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc------cCCHHH
Confidence 568999999999999998889999988 4589999999988888888888776654432 246888
Q ss_pred hHHHHHHHHHHHHHHHHHccC--Cccccc-cch-hhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHH----HHHHHHH
Q 020441 82 LFIVFLGVITLGTILMCFLRK--EEDKGE-KET-ADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA----YSGLQQA 153 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~--~~~~~~-~~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~----~~g~~~~ 153 (326)
.|.+.. +..++.++++. |++++. +++ .+++++++..+++.-++..+++++++.......+. +.+....
T Consensus 174 ~f~i~~----~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (426)
T PRK12307 174 AFFVGL----LPVLLVIYIRARAPESKEWEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWP 249 (426)
T ss_pred HHHHHH----HHHHHHHHHHHHCCCChHHHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHH
Confidence 776432 22222333322 211110 000 00000001111111112233455655432221111 1111101
Q ss_pred HHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 020441 154 FVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG 231 (326)
Q Consensus 154 f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~ 231 (326)
. .+.++ .+..+ .|. ...+....+.+++..++.++.|++.||++||+ .+..+.+.......... ..+++.
T Consensus 250 ~-~~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~---- 320 (426)
T PRK12307 250 I-FGLLP-TYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKK-TFSIGLLMSFLFIFPLF-RIPQDN---- 320 (426)
T ss_pred H-HHHHH-HHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHH-HHcccc----
Confidence 1 11122 22222 243 35677778888999999999999999999885 65555554443322211 112221
Q ss_pred hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 232 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 232 ~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.....+..+.++.......+..+.++.+.+|++ +..+.+..+....+|..+++.+...+.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~ 381 (426)
T PRK12307 321 YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLG 381 (426)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHH
Confidence 111111222222333334455667888999976 466888777778888888888877664
No 23
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.64 E-value=8.9e-14 Score=128.76 Aligned_cols=255 Identities=12% Similarity=0.041 Sum_probs=148.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..++...+++.|..+ +++|++..|+.......+..+|+.++..+.. .++||.
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~~~~ 146 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFP----------KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV------WFSWHA 146 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HcChHH
Confidence 467899999999999988888888887 4589999999998889999999888766543 246888
Q ss_pred hHHHHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHH-HHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~-g~~~~f~~~~~ 159 (326)
.|.+...+..+..++. +++|++.++++++ +.+.++..++..+.+++|+.+......... .....+. ...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 217 (377)
T PRK11102 147 IFWVLALAAILAAALVFFFIPETLPKERRQ--------PFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFL-TAG 217 (377)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCcccccC--------CCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHH-HcC
Confidence 7876655555554433 4455432221111 011122233344567787765433221111 1111111 111
Q ss_pred cccccccccc--chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCcchHHHH
Q 020441 160 TKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPL 236 (326)
Q Consensus 160 ~~~~~~~~lg--~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~-~~~l~~~~~~~~~~~~~~~ 236 (326)
+.+..+..| .++.+......++...+++++.|++.||+++|+ .+..+.+......+ +......+.. .+...
T Consensus 218 -~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 291 (377)
T PRK11102 218 -PFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALN-MLRFGLWIQFIMGIWLVVSALLDLG----FWALV 291 (377)
T ss_pred -HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHHHHHHHHhhh----HHHHH
Confidence 112222233 347788888999999999999999999999885 55555544332211 1111111111 12233
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHH-HHHHHHHHHHHh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVW-QCASIAVVFFIG 287 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~-~~~g~~i~~~i~ 287 (326)
+...+.+.+.+...........+..|+++..+.+.++.. .++|..++....
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 292 VGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344445555555555666777786666666654443 456666666554
No 24
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.63 E-value=1.8e-13 Score=127.36 Aligned_cols=249 Identities=14% Similarity=0.061 Sum_probs=141.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.|..++....++.+..+ +++|++..|++......+..+|+.++..+.. ..+||.
T Consensus 95 ~~~r~l~G~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~gwr~ 158 (382)
T PRK10091 95 AIGRLVSGFPHGAFFGVGAIVLSKIIK----------PGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ------EFSWRY 158 (382)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhCC----------hHHhhHHHHHHHHHHHHHHHHhccHHHHHhh------hccHHH
Confidence 568999999999988877777777776 4578999999988888999888888765543 246998
Q ss_pred hHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH-HHhhc
Q 020441 82 LFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF-VWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f-~~~~~ 159 (326)
.|.+...+..+..+. ..++|+++++++ . +.++ .++.+++++......... .+....+ +.+..
T Consensus 159 ~f~~~~~~~~~~~~~~~~~lp~~~~~~~-~----------~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 222 (382)
T PRK10091 159 TFLLIAVFNIAVLASIYFWVPDIRDEAK-G----------GLRE----QFHFLRSPAPWLIFAATM-FGNAGVFAWFSYI 222 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcccc-c----------CHHH----HHHHhcChHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 887665444443332 233444321111 0 0111 123456665544332211 1111111 11222
Q ss_pred ccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 160 TKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 160 ~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
++ +..+..|. +..++...+.+++..++.++.|++.||+++++ ++..+..+..+..+.. ....++ ++...+
T Consensus 223 ~~-~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~-~~~~~~~~~~i~~~~~-~~~~~~-----~~~~~~ 294 (382)
T PRK10091 223 KP-YMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLR-IAAVTDFIIVLALLML-FFFGGM-----KTASLI 294 (382)
T ss_pred HH-HHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchh-HHHHHHHHHHHHHHHH-HHHHhh-----HHHHHH
Confidence 22 23333343 46788888999999999999999999999885 5555544444333221 112222 133344
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
..++++.+.....+.......+..++++..+.+..+....+|.++++.+...+
T Consensus 295 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Gp~~~G~l 347 (382)
T PRK10091 295 FAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAIGAYCGGMM 347 (382)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 45555665555454444333333333333333334555667777777766544
No 25
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.63 E-value=2.2e-13 Score=127.65 Aligned_cols=259 Identities=16% Similarity=0.101 Sum_probs=146.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhH-HHHHHHHHHHhcCCCCCCCCCch
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ-FVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~-iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
+..|+++|++.+........++.+..+ +++||+..|+..+..+.+. ++|+.++..+... .+|+
T Consensus 109 ~~~~~i~G~g~~~~~~~~~~~~~~~~~----------~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~------~g~~ 172 (402)
T TIGR00897 109 LLFYGIRGLGYPLFAYSFLVWVVYNTK----------QDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA------FGEM 172 (402)
T ss_pred HHHHHHHHcchHHHHhHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------cchH
Confidence 457889999988877766666667666 3589999999998888886 5777776443221 2322
Q ss_pred hhHHHHHHHHHHHHHHHHH-ccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH-HHHHHhh
Q 020441 81 LLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ-QAFVWAE 158 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~-~~f~~~~ 158 (326)
..+........++.++.++ .+++.++++++ ++ .+..+.+ +....+++||+........+..... .++ ..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 243 (402)
T TIGR00897 173 NTLWSALAFVLTGGVIALFSNKDIFTPQHMQ-TR---EKFSELG---KAATILFTNPNVLLGGMVRIINTIGLFGF--AV 243 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCccccc-CC---cchhhHH---HHHHHHHcChhHHHHHHHHHHHHHHHHHH--HH
Confidence 2222212122233333333 33321111111 00 0111112 2223466788876544222221111 111 12
Q ss_pred cccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHH-HHHHHh-cccCCCCCcchHH
Q 020441 159 FTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV-FLWILI-NYSVTSGVLGTLY 234 (326)
Q Consensus 159 ~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~-~~~~~l-~~~~~~~~~~~~~ 234 (326)
+.+.+.+ ..|.+ +.+....+.+++..++++..|++.||++||+.....+.+..... ..+.+. ....+. .+.
T Consensus 244 ~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~----~~~ 318 (402)
T TIGR00897 244 FLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHS----FAV 318 (402)
T ss_pred HHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCc----HHH
Confidence 2223332 24543 55666777888999999999999999998753322222222221 111111 111111 244
Q ss_pred HHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 235 PLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 235 ~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.++..+++|++.+...+ ..+.+.+..|+++..+++.++..+.+|..+++.+...+.
T Consensus 319 ~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~ 374 (402)
T TIGR00897 319 ALIIAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFI 374 (402)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667788888877654 456677777877788999999999999999998887664
No 26
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.63 E-value=1.7e-13 Score=128.02 Aligned_cols=277 Identities=13% Similarity=0.075 Sum_probs=158.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..+.+...++.+..+ +++|++..|+.......+.++|+.++..+.. ..+|+.
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~------~~g~~~ 179 (399)
T PRK05122 116 LLGRLLLGIGESLAGTGSILWGIGRVG----------ALHTGRVISWNGIATYGALAIGAPLGVLLYH------WGGLAG 179 (399)
T ss_pred HHHHHHHHhhHHhhcchHHHHHHhhcC----------hhhhccchhhhhhhhhHHHHHHHHHHHHHHH------cccHHH
Confidence 567999999999999888777777777 4589999998888888899999998876654 246886
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.+.+..+ ++.+..++.++.+++++++ . ++.+.++.+|+.++ .. .......+..+....+. ..
T Consensus 180 ~~~~~~~---~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~-~~--- 241 (399)
T PRK05122 180 LGLLIML---LALLGLLLARPRPAVPPVK-G-----ERLPFRRVLGRVWP---YG--MGLALASIGFGTIATFI-TL--- 241 (399)
T ss_pred HHHHHHH---HHHHHHHHHhcCCCCCCCC-c-----cchhHHHHHHHHHH---HH--HHHHHHHHHHHHHHHHH-HH---
Confidence 6654332 2222223333211111111 0 11123333332111 10 00100011111111111 11
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHH
Q 020441 162 EIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAAL 241 (326)
Q Consensus 162 ~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 241 (326)
+.. ..|.+..+.....++++..++.++.|++.||+++|+ .+..+..+........ ...++ ++..++..++
T Consensus 242 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l 311 (399)
T PRK05122 242 -YYA-ARGWDGAALALTLFGVAFVGARLLFGNLINRLGGLR-VAIVSLLVEILGLLLL--WLAPS-----PWMALIGAAL 311 (399)
T ss_pred -HHH-HcccccchHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHH
Confidence 111 123344455667788888999999999999999885 5555544433332221 12232 2445566788
Q ss_pred HhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 020441 242 LGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVGILFLTIQ 316 (326)
Q Consensus 242 ~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (326)
+|++.+...+.......+..|++ +..+++.++..+.+|.+++..+...+. .....++..+..+++.+......++
T Consensus 312 ~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 312 TGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 89998888877777777888866 466888899888888887766665553 2222333334445555554444444
Q ss_pred HhhccC
Q 020441 317 VEKAFY 322 (326)
Q Consensus 317 ~~~~~~ 322 (326)
.+|+++
T Consensus 392 ~~~~~~ 397 (399)
T PRK05122 392 APRAVP 397 (399)
T ss_pred ccccCC
Confidence 444443
No 27
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.62 E-value=2.4e-13 Score=127.17 Aligned_cols=274 Identities=17% Similarity=0.147 Sum_probs=159.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|++.|++.+ .+.....++.+..+ +++|++..|+.....+.+..+|+.++..+.. ..+||.
T Consensus 111 ~~~~~~~g~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~~~~ 173 (408)
T PRK09874 111 LILRALLGLLGG-FVPNANALIATQVP----------RNKSGWALGTLSTGGVSGALLGPLAGGLLAD------SYGLRP 173 (408)
T ss_pred HHHHHHHHHhhh-hHHhHHHHHHHhcC----------HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCHHH
Confidence 467888998755 34444445555555 4588999999988888999998888766543 236887
Q ss_pred hHHHHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHH-HHHHHHHHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLII-PLFAYSGLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~-p~~~~~g~~~~f~~~~~ 159 (326)
.|.+..++.++..++. +++|++.++.+++ ++.+. ++..+.+++++..+.. ...+......+.....+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (408)
T PRK09874 174 VFFITASVLFLCFLVTLFCIRENFQPVSKK-------EMLHM----REVVTSLKNPKLVLSLFVTTLIIQVATGSIAPIL 242 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccccch-------hhhHH----HHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776665555554443 3444432211110 01111 2334456777764322 11121121111111111
Q ss_pred cccccccccc-ch----hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHH
Q 020441 160 TKEIVTPALG-VS----GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY 234 (326)
Q Consensus 160 ~~~~~~~~lg-~~----~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~ 234 (326)
+ .+..+..+ .+ ..+....+.++...++.+..|++.||++||+ .+..+........+. +.+.++ ++.
T Consensus 243 ~-~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~--~~~~~~-----~~~ 313 (408)
T PRK09874 243 T-LYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEK-ILITALIFSVLLLIP--MSFVQT-----PLQ 313 (408)
T ss_pred H-HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch-hHHHHHHHHHHHHHH--HHHhcc-----HHH
Confidence 1 12111111 11 2345556678888899999999999999885 555555444333322 122233 245
Q ss_pred HHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHH
Q 020441 235 PLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVG 309 (326)
Q Consensus 235 ~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~----~~~~~~~~~~~~~~~~~~ 309 (326)
.++..+++|++++...+...+.+.+..|++ +...++.++..+.+|..+++.+...+. .....++..++.+++.+.
T Consensus 314 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 393 (408)
T PRK09874 314 LGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVY 393 (408)
T ss_pred HHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHH
Confidence 566778889999999988888888877765 466788888889999999888887653 223333444444444444
Q ss_pred HHH
Q 020441 310 ILF 312 (326)
Q Consensus 310 ~~~ 312 (326)
...
T Consensus 394 ~~~ 396 (408)
T PRK09874 394 SWN 396 (408)
T ss_pred HHH
Confidence 433
No 28
>PRK03699 putative transporter; Provisional
Probab=99.62 E-value=2.7e-13 Score=126.65 Aligned_cols=252 Identities=14% Similarity=0.015 Sum_probs=147.8
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|.++|++.|..++....+++|..| +++|++..+........+..+++.+...+... ..+||.
T Consensus 99 ~~~~~l~G~~~g~~~~~~~~~i~~~~~----------~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-----~~gw~~ 163 (394)
T PRK03699 99 SIAMFVLGVVSGITMSIGTFLITHVYE----------GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLAR-----SIEWYW 163 (394)
T ss_pred HHHHHHHHHhhHhhccchhHHhhhhcc----------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----cccHHH
Confidence 467899999999988877778888776 45789888887777777777777776544321 247998
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHH-HHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p-~~~~~g~~~~f~~~~~~ 160 (326)
.|.+..++.++..++.++.+.|+.+++++ ++ ++.. .| ...+++..++.. .+++...+.++ ..+.
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~p~~~~~~~--~~---~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 228 (394)
T PRK03699 164 VYACIGLVYVAIFILTLFSEFPALGKHAP--KA---DKPV----AK----EKWGIGVLFLAIAALLYILAQLTF--ISWV 228 (394)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccccccCc--cc---cCcc----cc----ccCChHHHHHHHHHHHHHHHHHHH--HHHH
Confidence 88765544444444444433332221111 00 0000 01 111333322221 12222111111 1222
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+.+.++..|. .+.+....++.++..++.++.|++.||+++|+ .+............. + ...++. ....+.
T Consensus 229 p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-~l~~~~~~~~~~~~~-~-~~~~~~-----~~~~~~ 300 (394)
T PRK03699 229 PEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQR-ILTVLAGLALVLMYL-F-VNTDDP-----SHLLYA 300 (394)
T ss_pred HHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhh-HHHHHHHHHHHHHHH-H-HHcCCc-----hHHHHH
Confidence 3344444454 36777788888899999999999999999885 444333332222211 1 122332 334445
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+++|++.+...+...+...+..|++++...+.......+|+.+++.+..++.
T Consensus 301 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~ 353 (394)
T PRK03699 301 ILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIV 353 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 67788877777777777777777766555667666677788888887776553
No 29
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.62 E-value=1.5e-13 Score=130.77 Aligned_cols=289 Identities=10% Similarity=-0.020 Sum_probs=148.1
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhH-HHHHHHHHHHhcCCCCCCCCCch
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQ-FVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~-iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
+..|+++|++.|..++.....+.+..+ +++||+..|++....+.+. ..|.++...... ..+||
T Consensus 124 ~~~~~l~gi~~g~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~------~~gw~ 187 (452)
T PRK11273 124 FVLLFLCGWFQGMGWPPCGRTMVHWWS----------QKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW------FNDWH 187 (452)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHhCC----------hHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH------hccHH
Confidence 456889999999888776666777766 3579999999877777665 445444333321 13688
Q ss_pred hhHHHHHHHHHHHHH-HHHHccCCcccc---ccch--h---h---hchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHH
Q 020441 81 LLFIVFLGVITLGTI-LMCFLRKEEDKG---EKET--A---D---ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYS 148 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~-l~~~l~~~~~~~---~~~~--~---~---~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~ 148 (326)
..|.+..++..+..+ ..+++|+++++. ++++ . + .++.++.+.++.+++ .++++++...........
T Consensus 188 ~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~ 265 (452)
T PRK11273 188 AALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQ--YVLPNKLLWYIAIANVFV 265 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHH--HHHcChHHHHHHHHHHHH
Confidence 888766555555433 345565433221 0000 0 0 000111123332221 245677654432222221
Q ss_pred HHHHHHHHhhccccccccccc--chhhHHHHHHHHHHHHHHHhhhhhhccCC--CChhhHHHHHHHHHHHHHHHHHhccc
Q 020441 149 GLQQAFVWAEFTKEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYS 224 (326)
Q Consensus 149 g~~~~f~~~~~~~~~~~~~lg--~~~~~~~~~~~gi~~~i~~~~~G~l~d~~--g~~~~i~~~g~i~~~~~~~~~~l~~~ 224 (326)
....... ..+.+.+.++..| ....+....+++++..++.++.|+++||+ +||.........+.........+...
T Consensus 266 ~~~~~~~-~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~ 344 (452)
T PRK11273 266 YLLRYGI-LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPA 344 (452)
T ss_pred HHHHHHH-HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcc
Confidence 1111111 1222334444334 34667777788888999999999999998 44421222111211111111111111
Q ss_pred CCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHH-HHHHhhhhh----HHHHHHH
Q 020441 225 VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAV-VFFIGPYIS----LQAMLIV 298 (326)
Q Consensus 225 ~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i-~~~i~~~~~----~~~~~~~ 298 (326)
++ +....+..+++|..........++...+.+|++ +..+.+..+....+|+++ ++.+...+. .....++
T Consensus 345 ~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~ 419 (452)
T PRK11273 345 GN-----PTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMV 419 (452)
T ss_pred cC-----hHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHH
Confidence 11 122223333444433222333455667888876 567888888877777654 566655443 2233344
Q ss_pred HHHHHHHHHHHHHHHH
Q 020441 299 MVVGICVALVGILFLT 314 (326)
Q Consensus 299 ~~~~~~~~~~~~~~~~ 314 (326)
+.+.++++.+...+..
T Consensus 420 ~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 420 MIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 5555556655555443
No 30
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.61 E-value=1.8e-13 Score=129.50 Aligned_cols=265 Identities=11% Similarity=-0.023 Sum_probs=148.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|++.|++.|..|+...+++.+..++ ++||+..|+.....+++..+|+.+...+.. ..+||.
T Consensus 115 ~~~~~l~g~~~g~~~~~~~~~~~~~~~~----------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~------~~gw~~ 178 (434)
T PRK11663 115 ALLWVLNAFFQGWGWPVCAKLLTAWYSR----------TERGGWWAIWNTAHNVGGALIPLVVGAIAL------HYGWRY 178 (434)
T ss_pred HHHHHHHHHHHHccchHHHHHHHHhCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccHHH
Confidence 3568889999999998888888888873 589999999999999999999888766543 247998
Q ss_pred hHHHHHHHHHHHH-HHHHHccCCcccc---cc-----chhhh-c--hhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 020441 82 LFIVFLGVITLGT-ILMCFLRKEEDKG---EK-----ETADA-S--VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 149 (326)
Q Consensus 82 ~f~~~~~i~~l~~-~l~~~l~~~~~~~---~~-----~~~~~-~--~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g 149 (326)
.|.+..++.++.. +..+++|+++++. ++ +..+. + +.++.+.++.++. +.++|++...+....+...
T Consensus 179 ~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 256 (434)
T PRK11663 179 GMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTK--YVLLNPYIWLLSFSYVLVY 256 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccccccccchhccccCCChhhhHHH--HHhcChHHHHHHHHHHHHH
Confidence 8876654444333 3344555432211 00 00000 0 0011123332221 2456777655432222221
Q ss_pred HHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCC--CChhhHHHHHHHHHHHHHHHHHhcccC
Q 020441 150 LQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSV 225 (326)
Q Consensus 150 ~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~--g~~~~i~~~g~i~~~~~~~~~~l~~~~ 225 (326)
...... ..+.+.+..+..|. .+.+....+++++..+++++.|++.||+ ++|+.......+.......... ..+.
T Consensus 257 ~~~~~~-~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~ 334 (434)
T PRK11663 257 VVRAAI-NDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLW-LMPF 334 (434)
T ss_pred HHHHHH-HHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHH-Hccc
Confidence 111111 11222344334454 3667778888899999999999999998 3222221111111111111111 1111
Q ss_pred CCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 226 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.. ........+.+|++....++......++.+|++ +..+.+..+....+|.++++.....+
T Consensus 335 ~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l 396 (434)
T PRK11663 335 AS----YVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKV 396 (434)
T ss_pred cc----HHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHH
Confidence 11 122333344455544333344456678888765 56788889999999999988777655
No 31
>TIGR00898 2A0119 cation transport protein.
Probab=99.61 E-value=1.6e-13 Score=132.29 Aligned_cols=259 Identities=14% Similarity=0.019 Sum_probs=156.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++...+++.|..+ +++|++..++....+..|.+++++++..+. +||.
T Consensus 184 ~~~r~l~G~~~~~~~~~~~~~~~e~~~----------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---------~wr~ 244 (505)
T TIGR00898 184 LVFRLLVGMGIGGIWVQAVVLNTEFLP----------KKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---------DWRW 244 (505)
T ss_pred HHHHHHHHhhccchHHHHHHHhheecC----------hhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---------HHHH
Confidence 568999999999999999999999998 458999999888888888888888876542 2888
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccc----cccchhhh------c-----hhh---hhHHHH---HH---HHHHHhhcchh
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDK----GEKETADA------S-----VNF---YSYLVS---LS---KSITTLLADVR 137 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~----~~~~~~~~------~-----~~~---~~~~~~---~~---k~~~~~~~~~~ 137 (326)
.|.+..+..++..+..+++|++.+. .+.++.++ + ... .....+ .- .+..+++++|+
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 324 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPN 324 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChH
Confidence 8877766666655556666643210 00000000 0 000 000000 00 12344566776
Q ss_pred hHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH
Q 020441 138 MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 217 (326)
Q Consensus 138 ~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~ 217 (326)
............+...+. ++...+....++.+ ......+.++.+..+.++.+++.||+|||+ .+..+.++..+..+
T Consensus 325 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~l~dr~grr~-~~~~~~~~~~~~~l 400 (505)
T TIGR00898 325 LRKTTLCLMMLWFTTAFS--YYGLVLDLGNLGGN-IYLDLFISGLVELPAKLITLLLIDRLGRRY-TMAASLLLAGVALL 400 (505)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHhccccccCCC-hHHHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHH
Confidence 654432222222222111 11111111222322 223445678888899999999999999985 55555554443332
Q ss_pred HHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 218 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
... +.++.. .....+..++.+++.+...+..+.+..|.+|++ +..+.+..+....+|+.+++.+..
T Consensus 401 ~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 401 LLL--FVPVDL---YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHH--HcCCCc---hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 211 122211 133344455556666666778889999999977 577889888999999999988876
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.61 E-value=7.7e-14 Score=133.50 Aligned_cols=268 Identities=12% Similarity=0.055 Sum_probs=164.1
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++...+++.|..|+ ++|++..|++......+..+|+.++..+.. ..+||.
T Consensus 94 ~~~~~~~G~~~~~~~~~~~~~i~~~~~~----------~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~------~~~w~~ 157 (485)
T TIGR00711 94 IIFRVIQGFGGGPLIPLSFSTLLNIYPP----------EKRGRAMAIWGLTVLVAPALGPTLGGWIIE------NYHWRW 157 (485)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHCCH----------HHHHHHHHHHHHHHHHHhhhhhccHhHhcc------CcCcee
Confidence 5789999999999999998999999884 589999999988889999999888765543 246887
Q ss_pred hHHHHHHHHHHHHHHHH-HccCCcccccc--chh-----------------hhchhhh-hH--H---------------H
Q 020441 82 LFIVFLGVITLGTILMC-FLRKEEDKGEK--ETA-----------------DASVNFY-SY--L---------------V 123 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~-~l~~~~~~~~~--~~~-----------------~~~~~~~-~~--~---------------~ 123 (326)
.|.+...++++..++.. ++|++++++++ |.. +.+.... .+ . .
T Consensus 158 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (485)
T TIGR00711 158 IFLINVPIGIIVVVVAFFILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVV 237 (485)
T ss_pred hhhhhhHHHHHHHHHHHHHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 77766555555444433 34432221110 000 0000000 00 0 0
Q ss_pred HHHH-----HHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhcc
Q 020441 124 SLSK-----SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTT 196 (326)
Q Consensus 124 ~~~k-----~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d 196 (326)
++.+ .-.+++++|+........+..++.. +....+.+.+.++..|. .+.++.+...+++..+++++.|++.|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~ 316 (485)
T TIGR00711 238 WELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGL-YGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGD 316 (485)
T ss_pred HHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0000 0123556666544322222222111 11112222344444454 36788888899999999999999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHH
Q 020441 197 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVW 275 (326)
Q Consensus 197 ~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~ 275 (326)
|++||+ ++..+..+......+......++.+ ........++.|++.+...+.......+..|++ +..+.+.++..
T Consensus 317 r~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 392 (485)
T TIGR00711 317 KIDPRK-LVTIGLILYAVGFYWRAFTFTPDTP---FLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFT 392 (485)
T ss_pred hcCcHH-HHHHHHHHHHHHHHHHhccCCCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHH
Confidence 999985 6666655544433322212333321 233455577889998888777777776777865 46688899999
Q ss_pred HHHHHHHHHHHhhhh
Q 020441 276 QCASIAVVFFIGPYI 290 (326)
Q Consensus 276 ~~~g~~i~~~i~~~~ 290 (326)
+.+|++++..+...+
T Consensus 393 ~~~g~~ig~~i~g~~ 407 (485)
T TIGR00711 393 RQLGGSIGTALITTI 407 (485)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999988877654
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.61 E-value=8.5e-14 Score=129.61 Aligned_cols=269 Identities=13% Similarity=0.074 Sum_probs=154.3
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++...+++.|..+ +++|++..|++......|.++|+.+...+.... ..+||.
T Consensus 104 ~~~~~l~G~~~~~~~~~~~~~i~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~----~~~w~~ 169 (405)
T TIGR00891 104 FIARLVIGIGMGGEYGSSAAYVIESWP----------KHLRNKASGLLISGYAVGAVVAAQVYSLVVPVW----GDGWRA 169 (405)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHhCC----------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CccHHH
Confidence 467999999999999998899999888 468999999999999999999998887665422 135888
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhh--chh------hhhHHHHHHHHH----HHhhc-chh-hHHHHHHHHH
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADA--SVN------FYSYLVSLSKSI----TTLLA-DVR-MLLIIPLFAY 147 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~--~~~------~~~~~~~~~k~~----~~~~~-~~~-~lll~p~~~~ 147 (326)
.|.+..+...+..+....+|++++.+++++.++ ++. ++...++..++. .+..+ ++. ...+......
T Consensus 170 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (405)
T TIGR00891 170 LFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLF 249 (405)
T ss_pred HHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHH
Confidence 776543333333232333443221111000000 000 000001111111 11111 111 1111111111
Q ss_pred HHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccC
Q 020441 148 SGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV 225 (326)
Q Consensus 148 ~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~ 225 (326)
.+...... ..+.+.+..+..|. .+.+......+++..+++++.|++.||++||+ .+..+.+......... ....+
T Consensus 250 ~~~~~~~~-~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~-~~~~~~~~~~~~~~~~-~~~~~ 326 (405)
T TIGR00891 250 ANLYSHPI-QDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRK-AYVCSLLAGQLLIIPV-FAIGA 326 (405)
T ss_pred HHHHHhhh-hhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchh-hhHHHHHHHHHHHHHH-HHhCC
Confidence 11110001 11112233333443 46778888899999999999999999999885 5555544332221111 12222
Q ss_pred CCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhhH
Q 020441 226 TSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISL 292 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~~ 292 (326)
+ .+...+..++.|++.+...+..++.+.+.+|++ +..+++..+....+|..+++.+...+..
T Consensus 327 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~ 389 (405)
T TIGR00891 327 N-----VAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQ 389 (405)
T ss_pred c-----hHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 133344445666666666777788899999876 5778889899999999999998877653
No 34
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.60 E-value=1.4e-13 Score=126.64 Aligned_cols=252 Identities=12% Similarity=0.109 Sum_probs=146.3
Q ss_pred HHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcC--CCCCCCCCchhh
Q 020441 5 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD--DKGGSTSGTTLL 82 (326)
Q Consensus 5 ~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~--~~~~~~~~~~~~ 82 (326)
.++.|++.+...++..+++.|..| +++|++..|+.......|.++|+.++..+... .++...|+||..
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~~~----------~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 90 AFLIAFFSATQDIALDAWRLEILS----------DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCC----------HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHH
Confidence 445666777777777788888887 46899999999988999999999888655432 223446779999
Q ss_pred HHHHHHHHHHHHHHHHHc-cCCccccccchhhhchhhhhHHHHHHHHHHHhhcchh---hHHHHHHHHHHHHHHHHHHhh
Q 020441 83 FIVFLGVITLGTILMCFL-RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVR---MLLIIPLFAYSGLQQAFVWAE 158 (326)
Q Consensus 83 f~~~~~i~~l~~~l~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~---~lll~p~~~~~g~~~~f~~~~ 158 (326)
|.+..++.++..+..+++ |++.++++++ + +++.+.++.+++ ++++++ ...+....+..........+.
T Consensus 160 f~i~ai~~l~~~~~~~~~~~e~~~~~~~~-~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (356)
T TIGR00901 160 FFWTALLILPGLLVTLFLAKEPQEDASVP-K----PLTQAVLKPIRE---FFQRKNMIQALLLLLLIVLYKLGDSAATVL 231 (356)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcccccc-h----hHHHHHHHHHHH---HHHhcCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 987766555555444443 3332211111 0 111122333333 334443 332221211111111111112
Q ss_pred cccccccccccc--hhhHHHHHHHH-HHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH-HHHhcccCC-C--CCcc
Q 020441 159 FTKEIVTPALGV--SGVGGAMAVYG-AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVT-S--GVLG 231 (326)
Q Consensus 159 ~~~~~~~~~lg~--~~~~~~~~~~g-i~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~-~~~l~~~~~-~--~~~~ 231 (326)
++ .+..+ +|. ++.+.+..+.+ +...++.++.|++.||+|+|+ .+..+.++...... ..+.....+ . +..+
T Consensus 232 ~~-~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (356)
T TIGR00901 232 TT-LFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILY-ALLLFGIVQALTNAGFVWLASNGHHDGITFPH 308 (356)
T ss_pred HH-HHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHHHHHHHHHHHHHhcCcccccccch
Confidence 22 23233 444 36666666666 467789999999999999875 44444444443322 111111110 0 0001
Q ss_pred hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHH
Q 020441 232 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQC 277 (326)
Q Consensus 232 ~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~ 277 (326)
.+....+.++.+++.+..++...+++.+.+|++. .+.++.++..++
T Consensus 309 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 309 LLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 2445666778899999999999999999999874 668887766543
No 35
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.60 E-value=1e-13 Score=133.48 Aligned_cols=265 Identities=13% Similarity=0.071 Sum_probs=159.2
Q ss_pred CchhHHhhhhhhhhhhccccceeccc-chhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCc
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAA-ALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT 79 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~-a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~ 79 (326)
++.+|+++|+|.+..+++....+.+. .+ +++|++..|++......+..+|+.++..+... .+|
T Consensus 97 li~~r~l~G~g~~~~~~~~~~~l~~~~~~----------~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~------~gw 160 (495)
T PRK14995 97 LIATRALLAIGAAMIVPATLAGIRATFTE----------EKQRNMALGVWAAVGSGGAAFGPLVGGILLEH------FYW 160 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------CCh
Confidence 36789999999999887655545443 34 35899999999999999999999998777542 469
Q ss_pred hhhHHHHHHHHHHHHHHH-HHccCCcccccc--chhhh-----------------chhhhhH-----------------H
Q 020441 80 TLLFIVFLGVITLGTILM-CFLRKEEDKGEK--ETADA-----------------SVNFYSY-----------------L 122 (326)
Q Consensus 80 ~~~f~~~~~i~~l~~~l~-~~l~~~~~~~~~--~~~~~-----------------~~~~~~~-----------------~ 122 (326)
|..|.+...+.++..++. .++|++++++++ |.... ......+ .
T Consensus 161 r~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 240 (495)
T PRK14995 161 GSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFI 240 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHH
Confidence 988877665555554443 445543221111 10000 0000000 0
Q ss_pred HHHHHH-----HHHhhcchhhHHHHHHHHHHHHH-HHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhh
Q 020441 123 VSLSKS-----ITTLLADVRMLLIIPLFAYSGLQ-QAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRL 194 (326)
Q Consensus 123 ~~~~k~-----~~~~~~~~~~lll~p~~~~~g~~-~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l 194 (326)
..+.+. -.++++++.........+..+.. .++ ..+.+.+.+...|.+ +.+..+..+++...+++++.|++
T Consensus 241 ~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l 318 (495)
T PRK14995 241 RTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGF--ELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGIL 318 (495)
T ss_pred HHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001000 02455666544322222222211 111 112223444444543 78888999999999999999999
Q ss_pred ccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHH
Q 020441 195 TTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK 273 (326)
Q Consensus 195 ~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~ 273 (326)
.||+|+|+ ++..+.++.......... ...+.+ .+......++.|++.+...+.......+..|+++ ..+.+.++
T Consensus 319 ~~r~g~~~-~~~~g~~~~~~~~~~l~~-~~~~~~---~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~ 393 (495)
T PRK14995 319 VSRLGLRL-VATGGMALSALSFYGLAM-TDFSTQ---QWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIET 393 (495)
T ss_pred HHHcCchH-HHHHHHHHHHHHHHHHHH-hcCCCc---hHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHH
Confidence 99999885 666666555443322211 122211 2344566788899999988888887778888664 55777888
Q ss_pred HHHHHHHHHHHHHhh
Q 020441 274 VWQCASIAVVFFIGP 288 (326)
Q Consensus 274 ~~~~~g~~i~~~i~~ 288 (326)
+.+.+|.+++..+..
T Consensus 394 ~~~~lG~~~G~ai~g 408 (495)
T PRK14995 394 MAYELGAGLGIAIFG 408 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888777665554
No 36
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.59 E-value=3.6e-13 Score=125.27 Aligned_cols=245 Identities=12% Similarity=0.100 Sum_probs=142.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++.....+.+..+ +++|++..|++....+.|..+|+.+...+.... .+..
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~------~~~~ 161 (381)
T PRK03633 98 LAWRFVAGIGCAMIWVVVESALMCSGT----------SRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL------MSVL 161 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC----------HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc------cchH
Confidence 578999999999998865555555555 358999999998888999999988876653211 1112
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.+.. . +.+.+.+..++.+.++++++ + + +..+.+ +.+++|+........+..+......++..+
T Consensus 162 ~~~~-~-~~~~~~~~~~~~~~~~~~~~-~--~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp- 224 (381)
T PRK03633 162 PWVT-G-LVLAAILPLLFTRILNQQAE-N--H----DSTSIW-------PMLKLRQARLGVNGCIISGIVLGSLYGLMP- 224 (381)
T ss_pred HHHH-H-HHHHHHHHHHHhcccCCCCC-C--C----CCCCHH-------HHHHhcchHHHHHHHHHHHHHHHHHHHHHH-
Confidence 2211 1 11122222233332211111 1 0 111122 234566554433223333332222222222
Q ss_pred ccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHH
Q 020441 162 EIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMA 239 (326)
Q Consensus 162 ~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (326)
.+..+ .|. +.++....+.+++..+++...|++.||+++|+ ++..+........... . +. .......
T Consensus 225 ~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~-~l~~~~~~~~~~~~~~-~---~~------~~~~~~~ 292 (381)
T PRK03633 225 LYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLL-VLRVQVFVVILGSIAM-L---SQ------AAMAPAL 292 (381)
T ss_pred HHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHH-HHHHHHHHHHHHHHHH-h---hh------HHHHHHH
Confidence 23222 243 36677778888899999999999999999885 5555544444332221 1 11 1123345
Q ss_pred HHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 240 ALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 240 ~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+++|++.....+...+...+..|+++ ..+.+.++...++|.++++.+...+-
T Consensus 293 ~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~ 345 (381)
T PRK03633 293 FILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLM 345 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677777777888888888887654 44556777888899999998887663
No 37
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.59 E-value=7.8e-13 Score=123.91 Aligned_cols=252 Identities=15% Similarity=0.103 Sum_probs=136.9
Q ss_pred HHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHH
Q 020441 5 SLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFI 84 (326)
Q Consensus 5 ~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~ 84 (326)
.++.|+..+....+..+++.|..| +++|+++.++....++.+.++|+.+...+... .++||..|.
T Consensus 101 ~~~~~~~~~~~~~~~~al~~~~~~----------~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~-----~~gw~~~f~ 165 (402)
T PRK11902 101 AVLVAFLSASQDIVFDAYSTDVLH----------PEERGAGAAVKVLGYRLAMLVSGGLALWLADR-----VLGWGNTYL 165 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC----------hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhc-----ccCHHHHHH
Confidence 445566677777777778888877 45899999999988899999998887766431 147999887
Q ss_pred HHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 020441 85 VFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 164 (326)
Q Consensus 85 ~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~ 164 (326)
+..++..+..+..+++|+++++++++ + +.+++.++ +..+++++|+...+....+.......+..+..+. +.
T Consensus 166 i~a~~~l~~~l~~~~~~e~~~~~~~~--~---~~~~~~~~---~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~-~l 236 (402)
T PRK11902 166 LMAGLMLAGALTTLWAPEPEVPARPP--R---SLGEAVVG---PLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTT-FL 236 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCccccccc--c---hhHHHHHH---HHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHH-HH
Confidence 76655544444444554433221111 0 00111222 2334667776654332222221111111111111 22
Q ss_pred cccccc--hhhHHHHHHHHH-HHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH-HHHhcccCCCCCcchHHHHHHH-
Q 020441 165 TPALGV--SGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILINYSVTSGVLGTLYPLIMA- 239 (326)
Q Consensus 165 ~~~lg~--~~~~~~~~~~gi-~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~- 239 (326)
.+..|. +.+++.....+. +..++.++.|++.||+++|+ .+..+.+......+ +..+...+++ .+......
T Consensus 237 ~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~-~l~~~~~~~~l~~l~~~~~~~~~~~----~~~~~~~~~ 311 (402)
T PRK11902 237 IRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYR-SLMLFGVLQAVSNLGYWVLAVTPKH----LWTMALAIG 311 (402)
T ss_pred HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHhcCCc----HHHHHHHHH
Confidence 233444 466776655554 57889999999999999875 44444433332221 1112232222 13222222
Q ss_pred ---HHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhh
Q 020441 240 ---ALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 240 ---~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
+..|++.+...+....++.+.+|.+ .++.+....++|..++..++.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~G 360 (402)
T PRK11902 312 IENLCGGMGTAAFVALLMALCNRSFSAT---QYALLSALASVGRVYVGPTSG 360 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777777877777744 344444444555543333333
No 38
>PRK10133 L-fucose transporter; Provisional
Probab=99.59 E-value=3.8e-13 Score=127.46 Aligned_cols=261 Identities=10% Similarity=0.039 Sum_probs=150.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc-CCC--------
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDK-------- 72 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~-~~~-------- 72 (326)
+.+|+++|+|.|..+++..+++.+.+++ +++++..+++.+.+++|..+|.+++..+.. ...
T Consensus 121 l~~r~l~G~g~g~~~~~~~~~v~~~~~~----------~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~ 190 (438)
T PRK10133 121 LVGLFIIAAGLGCLETAANPFVTVLGPE----------SSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLD 190 (438)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHhCCh----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhh
Confidence 5789999999999999999998887663 355556788888888999999888765431 100
Q ss_pred -----CCCC------CCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHH
Q 020441 73 -----GGST------SGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLI 141 (326)
Q Consensus 73 -----~~~~------~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll 141 (326)
+... .+||.+|.....+..+..++..+.+.|+.+++++ .+ ++..+..+ +..+++++|+....
T Consensus 191 ~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~-~~---~~~~~~~~---~~~~ll~~~~~~~~ 263 (438)
T PRK10133 191 KMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNH-SD---AKQGSFSA---SLSRLARIRHWRWA 263 (438)
T ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc-cc---ccccchhh---hHHHHHhCchHHHH
Confidence 0001 2466666433322222222222322232221111 00 01111112 12235667765432
Q ss_pred -HHHHHHHHHHHHHHHhhccccc-ccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH
Q 020441 142 -IPLFAYSGLQQAFVWAEFTKEI-VTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 217 (326)
Q Consensus 142 -~p~~~~~g~~~~f~~~~~~~~~-~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~ 217 (326)
...+++.+.+.+.+ +..+ .+ .++..|.+ ..++.+..++++..+++++.|++.||+++|+ ++..+.++......
T Consensus 264 ~l~~~~~~~~~~~~~-~~~~-~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~-~l~~~~~~~~~~~~ 340 (438)
T PRK10133 264 VLAQFCYVGAQTACW-SYLI-RYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHK-VLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHH-HHHH-HHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHH
Confidence 22334444433322 1122 23 23344544 6788899999999999999999999999885 55555444332222
Q ss_pred HHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 218 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
. . ...++ ...+...+++|++.+...+..++...+.+|++...+-+... .+..|+++.+.+-..+.
T Consensus 341 ~-~-~~~~~------~~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~ 405 (438)
T PRK10133 341 I-S-AFAGG------HVGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVS 405 (438)
T ss_pred H-H-HHcCC------hHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHH
Confidence 1 1 12222 12245567889999999999999999998876444444333 34456666655555443
No 39
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.58 E-value=5.2e-13 Score=125.08 Aligned_cols=250 Identities=12% Similarity=0.045 Sum_probs=152.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..++++|++.+..+++..+++.+..| +++|++..|+.....+.+..+|+.++..+.. ++||.
T Consensus 103 ~~~~~l~g~~~~~~~~~~~~~~~~~~~----------~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~-------~g~~~ 165 (400)
T PRK11646 103 WLSCILSGLGGTLFDPPRTALVIKLIR----------PHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ-------YDFRL 165 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hhHHH
Confidence 467899999999999888888888877 4689999999999999999999999876652 36887
Q ss_pred hHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHH-HHhhc
Q 020441 82 LFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAF-VWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f-~~~~~ 159 (326)
.|.+..++.++..++ ..++|++ +++++ +++.++.. .+.++||+.+..... ..++...+ ....+
T Consensus 166 ~f~~~~~~~~~~~i~~~~~~~~~-~~~~~---------~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 230 (400)
T PRK11646 166 VCATGAVLFVLAAAFNAWLLPAY-KLSTV---------RTPVREGM---TRVLRDKRFVTYVLT--LTGYYMLAVQVMLM 230 (400)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcc-ccccc---------chhhHHHH---HHHHcCchHHHHHHH--HHHHHHHHHHHHHh
Confidence 776655444444333 3334322 11110 01112222 235677776543221 12211111 11122
Q ss_pred cccccccccc-chhhHHHHHHHHHHHHHHHhhhhhhccC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 160 TKEIVTPALG-VSGVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 160 ~~~~~~~~lg-~~~~~~~~~~~gi~~~i~~~~~G~l~d~-~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
.+.+.++..+ ....+....+.++....+....+++.|| .+.++ .+..+.++......+ +...++ +....+
T Consensus 231 ~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~~~~~~~~~--l~~~~~-----~~~~~~ 302 (400)
T PRK11646 231 LPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEH-RLMAGLLIMSLSMFP--IGMVSN-----LQQLFT 302 (400)
T ss_pred hhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhH-HHHHHHHHHHHHHHH--HHHhhh-----HHHHHH
Confidence 2233333222 2356666666666666555566777665 44343 444444443333222 222233 233445
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
..++++++.+...+..++++.+..|++ +..+++.++...++|..+++.+...+.
T Consensus 303 ~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 303 LICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred HHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 567788888888889999999999865 577899999999999999998887664
No 40
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.58 E-value=1.4e-12 Score=125.30 Aligned_cols=259 Identities=14% Similarity=0.063 Sum_probs=145.6
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL 82 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~ 82 (326)
+.++++|++.+....+..++++|..| +++||+..++......+|.++|+.+...+... .+|||..
T Consensus 112 ~~~~l~~~~~a~~~i~~~a~~~~~~~----------~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~-----~~GWr~~ 176 (491)
T PRK11010 112 ALAVVIAFCSASQDIVFDAWKTDVLP----------AEERGAGAAISVLGYRLAMLVSGGLALWLADR-----YLGWQGM 176 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC----------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----ccCHHHH
Confidence 46778888888888888888888888 45899999999988899999998887766431 2479999
Q ss_pred HHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccc
Q 020441 83 FIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKE 162 (326)
Q Consensus 83 f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~ 162 (326)
|.+..+++++..+..+++|+++++++++ ++ .+.+..+.+++ .+++++........+.......+.....+ .
T Consensus 177 f~i~a~l~ll~~l~~~~~~e~~~~~~~~---~~--~~~~~~~~l~~---~~~~~~~~~~ll~~~l~~~~~~~~~~~~~-~ 247 (491)
T PRK11010 177 YWLMAALLIPCIIATLLAPEPTDTIPVP---KT--LEQAVVAPLRD---FFGRNNAWLILLLIVLYKLGDAFAMSLTT-T 247 (491)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccccc---cc--hhhhHHHHHHH---HHcCcCHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 9877666666555555565443221111 00 01111222333 34455433222111222122211111112 2
Q ss_pred cccccccc--hhhHHHHH-HHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHH-HHHHhcccCCCCCcchHHHHHH
Q 020441 163 IVTPALGV--SGVGGAMA-VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 163 ~~~~~lg~--~~~~~~~~-~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+..+..|. +.++.... ...++.+++.++.|++.||+++|+ .+..+.++..... ....+...+++ .......
T Consensus 248 ~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~-~l~i~~~l~~l~~l~~~~l~~~~~~----~~~l~~~ 322 (491)
T PRK11010 248 FLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFR-ALMIFGILQGVSNAGYWLLSITDKN----LYSMGAA 322 (491)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHhcccc----HHHHHHH
Confidence 32333454 36677663 444688899999999999999875 4433333333221 11112222211 1222323
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.++..++.+...+...++..++.|++ ..+.++..+...++|..++..+...+
T Consensus 323 ~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l 375 (491)
T PRK11010 323 VFFENLCGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWF 375 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344456666667765 46678888888888877665555544
No 41
>PRK12382 putative transporter; Provisional
Probab=99.58 E-value=5.9e-13 Score=124.13 Aligned_cols=246 Identities=15% Similarity=0.087 Sum_probs=148.6
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+++..+++.+..| +++|++..|+.......+..+|+.++..+.. ..+||.
T Consensus 116 ~~~r~l~G~~~~~~~~~~~~~~~~~~~----------~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~------~~g~~~ 179 (392)
T PRK12382 116 VVGRLILGFGESQLLTGALTWGLGLVG----------PKHSGKVMSWNGMAMYGALAAGAPLGLLLHS------HFGFAA 179 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhCC----------ccccchhhhHHHHHHHHHHHHHHHHHHHHHh------ccChHH
Confidence 467999999999999887777777776 4689999999887778888899888766543 236876
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.+.+.. ++..+...+.++.+++++++ + ++.+.++..| .+..+...... .....+....+. ..
T Consensus 180 ~~~~~~---~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~----~~~~~~~~~~l-~~~~~~~~~~~~-~~--- 241 (392)
T PRK12382 180 LALTTM---VLPLLAWAFNGTVRKVPAHA--G----ERPSLWSVVG----LIWKPGLGLAL-QGVGFAVIGTFV-SL--- 241 (392)
T ss_pred HHHHHH---HHHHHHHHHHHhccCCCCCc--c----cCchHHHHHH----HHHHhHHHHHH-HHHHHhHHHHHH-HH---
Confidence 554322 12222222333211111111 0 1112333322 22222221111 001111111111 11
Q ss_pred ccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHH
Q 020441 162 EIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAAL 241 (326)
Q Consensus 162 ~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 241 (326)
+..+ .+.+..++....++++..+++++.|++.||+++|+ .+..+..+....+... ...++ ....++..++
T Consensus 242 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l 311 (392)
T PRK12382 242 -YFAS-KGWAMAGFTLTAFGGAFVLMRVLFGWMPDRFGGVK-VAIVSLLVETVGLLLL--WLAPT-----AWVALAGAAL 311 (392)
T ss_pred -HHHh-cCCchhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe-ehHHHHHHHHHHHHHH--HHccc-----HHHHHHHHHH
Confidence 1111 23344556667788888999999999999999885 5555555444443322 12232 2445566788
Q ss_pred HhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 242 LGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 242 ~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+|++.+...+...+.+.+.+|++ +..+++.++....+|.++++.+...+.
T Consensus 312 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 362 (392)
T PRK12382 312 TGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLA 362 (392)
T ss_pred HHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89998888888888888888865 577899999999999999888887664
No 42
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.58 E-value=1.4e-13 Score=132.81 Aligned_cols=273 Identities=15% Similarity=-0.009 Sum_probs=143.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCC-C-----C--
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-K-----G-- 73 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~-~-----~-- 73 (326)
+.+|+++|++.|..++...+|++|..| +++||+..++......+|..+|+.++..+.... + +
T Consensus 119 ~~~r~l~G~~~g~~~~~~~~~~~e~~p----------~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~ 188 (502)
T TIGR00887 119 CFWRFWLGVGIGGDYPLSAIITSEFAT----------KKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADE 188 (502)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHhcC----------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 578999999999999999999999999 469999999999999999999998887654211 0 0
Q ss_pred ---------CCCCCchhhHHHHHHHHHHHHHHHHHccCCcc-----ccccchhh--------------hch-h----hhh
Q 020441 74 ---------GSTSGTTLLFIVFLGVITLGTILMCFLRKEED-----KGEKETAD--------------ASV-N----FYS 120 (326)
Q Consensus 74 ---------~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~-----~~~~~~~~--------------~~~-~----~~~ 120 (326)
..+++||.+|.+-...+++..+..+++|++.+ ++++++.+ .++ . +.+
T Consensus 189 ~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (502)
T TIGR00887 189 ASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVE 268 (502)
T ss_pred ccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhcccc
Confidence 12368998886544334444444456665422 11111000 000 0 000
Q ss_pred HHHHHHHHHHHhhcchhhHH--HHHHHHHHHHHHHHHH-hhcccccccccccch--h-----------hHH-HHHHHHHH
Q 020441 121 YLVSLSKSITTLLADVRMLL--IIPLFAYSGLQQAFVW-AEFTKEIVTPALGVS--G-----------VGG-AMAVYGAF 183 (326)
Q Consensus 121 ~~~~~~k~~~~~~~~~~~ll--l~p~~~~~g~~~~f~~-~~~~~~~~~~~lg~~--~-----------~~~-~~~~~gi~ 183 (326)
..+...++.++-.+.++... +.....+.+....++. ..+.+.+.+ ..|.+ . ... ...+..++
T Consensus 269 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (502)
T TIGR00887 269 VPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAG 347 (502)
T ss_pred chhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHH
Confidence 00111222222111122211 1111111222222221 111111211 12221 0 011 12334445
Q ss_pred HHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH-hhhhHHhhhhhHhhHHhhcc
Q 020441 184 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL-GIGDGVLNTQLSALLGILFK 262 (326)
Q Consensus 184 ~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~-G~~d~~~~~~~~~il~~~f~ 262 (326)
..++.++.+.+.||+|||+ +++.+..+..++.........+.+ .........+. .++.....+..+.+.+|.+|
T Consensus 348 ~i~g~~~~~~l~dr~gRR~-~l~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p 422 (502)
T TIGR00887 348 TVPGYWVTVFLVDIIGRKP-IQLMGFFILTVLFFVLGFAYNHLS----THGFLAIYVLAQFFANFGPNATTFIVPGEVFP 422 (502)
T ss_pred HHHHHHHHHHHhhhhcchh-HHHHHHHHHHHHHHHHHHHHHhcc----hhHHHHHHHHHHHHHhcCCCchhhhhhhccCc
Confidence 6668888899999999995 655555443333221111111111 01111111111 12222344555667789999
Q ss_pred CC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 263 HD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 263 ~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++ |..+.+..+....+|+.++..+.+++
T Consensus 423 ~~~R~~~~g~~~~~~~~~~~~~~~~~~~l 451 (502)
T TIGR00887 423 TRYRSTAHGISAASGKAGAIIGQFGFLYL 451 (502)
T ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhhhh
Confidence 87 67789988889999998888777655
No 43
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.58 E-value=4.5e-13 Score=123.72 Aligned_cols=250 Identities=15% Similarity=0.060 Sum_probs=143.5
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchh--hhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIG--SFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g--~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
..|+++|.+.+...+...++..|..++ ++|+ .+.+......+.+..+|+.++..+.. ..+||
T Consensus 92 ~~~~~~g~~~~~~~p~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~------~~~~~ 155 (375)
T TIGR00899 92 VLGVLLSSFASTANPQLFALAREHADR----------TGREAVMFSSVMRAQISLAWVIGPPLAFWLAL------GFGFT 155 (375)
T ss_pred HHHHHHHhhhhhhHHHHHHHHHHHhhh----------cchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH------hcccH
Confidence 457777766666665544454554442 2333 34677766778888898888776643 24689
Q ss_pred hhHHHHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHH-HHHHHHHHHHHhh
Q 020441 81 LLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAE 158 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~-~~~g~~~~f~~~~ 158 (326)
..|.+...+.++..++. +++|+++++++++ + ++.+.+ +.+++|+...+.... +..+....+. ..
T Consensus 156 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 221 (375)
T TIGR00899 156 VMFLTAALAFVLCGVLVWLFLPSYPRGAPGA--L----TRLEVR-------GLLASRDTRLLFVACTLMWGCNILYI-IN 221 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcccCcccc--c----Ccchhh-------hhhcCcchHHHHHHHHHHHHHHHHHH-hh
Confidence 88877665555554443 3465432221111 0 111111 134455544322211 1111111111 11
Q ss_pred cccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHH
Q 020441 159 FTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPL 236 (326)
Q Consensus 159 ~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~ 236 (326)
+ +.+..+..|. .+.+...........++.++.|++.||+++|+ .+..+.+........ +...++ .+..+
T Consensus 222 ~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~~~~~~~~~~~~--~~~~~~-----~~~~~ 292 (375)
T TIGR00899 222 M-PLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRR-LMLLAALAGVAFYTG--LAADNS-----LWALL 292 (375)
T ss_pred h-HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchh-HHHHHHHHHHHHHHH--HHHHHH-----HHHHH
Confidence 1 2233333443 35666666666677788899999999999885 555444433322221 112222 23445
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+..++.|++.+...+..+....+..|+++..+.+.++....+|..+++.+...+.
T Consensus 293 ~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~ 347 (375)
T TIGR00899 293 MLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILA 347 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5567778888877777888888999887767888888888899999888877653
No 44
>TIGR00895 2A0115 benzoate transport.
Probab=99.58 E-value=1.4e-13 Score=127.71 Aligned_cols=262 Identities=16% Similarity=0.080 Sum_probs=155.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..++++|++.+..++...+++.|..|+ ++|++..|+......++..+|+.+...+.. ..+|+.
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~g~~~ 172 (398)
T TIGR00895 109 LILRFLAGLGLGGLMPNLNALVSEYAPK----------RFRGTAVGLMFCGYPIGAAVGGFLAGWLIP------VFGWRS 172 (398)
T ss_pred HHHHHHHhcccccchhhHHHHHHHHcCH----------HhhchhHhhHhhHHHHHHHHHHHHHHHHhh------ccccee
Confidence 4678999999999999999999998883 589999999988889999999988765543 235776
Q ss_pred hHHHHHHHHHHHH-HHHHHccCCccc---cccchh-h--------------hchhhhhHHHHHHHHHHHhhcc----hhh
Q 020441 82 LFIVFLGVITLGT-ILMCFLRKEEDK---GEKETA-D--------------ASVNFYSYLVSLSKSITTLLAD----VRM 138 (326)
Q Consensus 82 ~f~~~~~i~~l~~-~l~~~l~~~~~~---~~~~~~-~--------------~~~~~~~~~~~~~k~~~~~~~~----~~~ 138 (326)
.|.+..++..+.. +...++|++.+. +++++. + ++.++.+...+..++..+.+++ ++.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (398)
T TIGR00895 173 LFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARIT 252 (398)
T ss_pred ehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHH
Confidence 6665533333333 334455543211 100000 0 0000000000111222222222 222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHH
Q 020441 139 LLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF 216 (326)
Q Consensus 139 lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~ 216 (326)
..+.............. ..+.+ +..+..|. +..+......+++..+++++.|++.||+++| .+.....+......
T Consensus 253 ~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 329 (398)
T TIGR00895 253 VLLWLLYFMLLVGVYFL-TNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-VTALLLLLGAVFAV 329 (398)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHH
Confidence 21111111111111111 11111 22222333 4677788888999999999999999999987 35433333322222
Q ss_pred HHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhh
Q 020441 217 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 289 (326)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~ 289 (326)
.. .. ..++ ....++..+++|++.+..++...+++.+.+|++ +..+++.+.....+|..+++.+...
T Consensus 330 ~~-~~-~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~ 396 (398)
T TIGR00895 330 LV-GS-TLFS-----PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGY 396 (398)
T ss_pred HH-HH-HhhC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 21 11 1122 245566778889999999999999999999976 5678899999999999998887654
No 45
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.58 E-value=7.8e-13 Score=139.45 Aligned_cols=267 Identities=17% Similarity=0.168 Sum_probs=160.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCC----CCCCCC
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD----KGGSTS 77 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~----~~~~~~ 77 (326)
+..|+++|++.+..+++..+++.+..+ +++|++.+|+.....++|.++|.+++..+.... .+...+
T Consensus 107 ~~~r~l~G~~~~~~~~~~~~~i~~~~~----------~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~ 176 (1146)
T PRK08633 107 FAVTFLLGAQSAIYSPAKYGIIPELVG----------KENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILG 176 (1146)
T ss_pred HHHHHHHHHHHHhhchHHHhhhHHhcC----------cccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 568999999999999999999999998 568999999999999999999999987765320 000011
Q ss_pred CchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHh
Q 020441 78 GTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWA 157 (326)
Q Consensus 78 ~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~ 157 (326)
.+...+.+...+.+++.++.+++|+...++++.+.+.+ ....++..+....+++++.....+...............
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (1146)
T PRK08633 177 RIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKK---YLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQA 253 (1146)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCcCCCCCCcccccccc---cccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHH
Confidence 12222222222233333444455443222111100000 011111112222345566554433222222211111112
Q ss_pred hcccccccccccc--h-hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHH
Q 020441 158 EFTKEIVTPALGV--S-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY 234 (326)
Q Consensus 158 ~~~~~~~~~~lg~--~-~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~ 234 (326)
.++ .+....+|. . ..++...+.+++.++++++.|++.||+++++ ++..+.++..+..+. +.+.++ .+.
T Consensus 254 ~~~-~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~-~~~~~~~~~~~~~~~--~~~~~~-----~~~ 324 (1146)
T PRK08633 254 NFP-AYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG-LVPLGALGLALSLFL--LPTAPS-----LAS 324 (1146)
T ss_pred hhH-HHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc-chhHHHHHHHHHHHH--HHHhhh-----HHH
Confidence 222 233333444 3 5688888899999999999999999998774 544454443333222 122222 245
Q ss_pred HHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 235 PLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 235 ~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.++..+++|++.+...+..++++.+..|++ +..+++.+++.+.+|..++..+...+
T Consensus 325 ~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l 381 (1146)
T PRK08633 325 VLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLF 381 (1146)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 567778889999998888899999998876 57788899999988887766665544
No 46
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.58 E-value=5.3e-13 Score=124.23 Aligned_cols=251 Identities=10% Similarity=-0.021 Sum_probs=155.1
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|.+.+..++...++..+. +++|++..|.......+|.++|+.++..+.. ..|||.
T Consensus 98 ~~~~~l~~~~~~~~~p~~~al~~~~------------~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~------~~g~~~ 159 (382)
T TIGR00902 98 FIAIGLFALFFSAGMPIGDALANTW------------QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG------MFDEQN 159 (382)
T ss_pred HHHHHHHHHHHccchhHHHHHHHHH------------HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH------HcChhH
Confidence 3567777777777666544443221 2367888898888889999999998776654 247887
Q ss_pred hHHHHHHHHHHHHHHHHHccCC-ccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKE-EDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
.|.+...+. +..++.+.++++ +++++++ +++.+ + .++..++++||+...+....+........+.+.++
T Consensus 160 ~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~---~----~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~ 229 (382)
T TIGR00902 160 ILAILTAGL-AFMLIGFLIKPTIPPKDAIP--EDESQ---G----DSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSA 229 (382)
T ss_pred HHHHHHHHH-HHHHHHHHcCCCCCCCcccc--ccccc---c----chhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776554322 222222333322 1111111 10001 1 12233467888876544333322222222223333
Q ss_pred cccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
.+.++ .|.+ .+|....+..+.+++..++.||+.||+++|+ ++..+.+.....+.. ..+.++ ++..++.
T Consensus 230 -~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~-~l~~~~~~~~~~~~~--~~~~~~-----~~~~~~~ 299 (382)
T TIGR00902 230 -IYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARD-LLLISAIACVGRWAI--IGAIEA-----FPLIFLL 299 (382)
T ss_pred -HHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHH-HHHHHHHHHHHHHHH--HHhHhh-----HHHHHHH
Confidence 23333 4544 7788888899999999999999999999885 666676666655432 233343 3556777
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHH-HHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLK-VWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~-~~~~~g~~i~~~i~~~~~ 291 (326)
.++.|+..+...+....++.+. |++. ..+.+.|+ ...++|.+++..++.++.
T Consensus 300 q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~ 353 (382)
T TIGR00902 300 QILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIY 353 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999888888887 7653 45666776 456788888888887664
No 47
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.57 E-value=8.8e-14 Score=131.90 Aligned_cols=275 Identities=13% Similarity=0.052 Sum_probs=147.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++....++.|..+ +++|++..++.......|..+|++++...... ....+||.
T Consensus 131 ~~~r~l~G~~~~~~~~~~~~~i~~~~~----------~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~---~~~~~w~~ 197 (481)
T TIGR00879 131 IVGRVLLGIGVGIASALVPMYLSEIAP----------KALRGALTSLYQLAITFGILVAYGFGSGKVSL---NNTLGWRI 197 (481)
T ss_pred HHHHHHHHhhhhHHHhHHHHHHHccCC----------hhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcC---CCCccHHH
Confidence 568999999999999999999999998 46899999999888889998888887111111 12357998
Q ss_pred hHHHHHHHHHHHHHHHHHccCCcc-----ccccchhhh--c----hhhhhHHHH------------------HHHHHHHh
Q 020441 82 LFIVFLGVITLGTILMCFLRKEED-----KGEKETADA--S----VNFYSYLVS------------------LSKSITTL 132 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~-----~~~~~~~~~--~----~~~~~~~~~------------------~~k~~~~~ 132 (326)
.|.+.....++..+..+++|+... +++++..+. + ..+.....+ ..++.++.
T Consensus 198 ~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (481)
T TIGR00879 198 PLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSS 277 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhc
Confidence 887754444444444555654321 110000000 0 000000000 00111111
Q ss_pred hcc--hhhHHHHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHH
Q 020441 133 LAD--VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 208 (326)
Q Consensus 133 ~~~--~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g 208 (326)
.++ ++.....................+.+.+. +..|. ...+......+++..++.++.|++.||++||+ .+..+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~-~~~~~ 355 (481)
T TIGR00879 278 TRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF-ENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRP-LLLIG 355 (481)
T ss_pred CchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH-HHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchH-HHHHH
Confidence 111 11111111111110000000011111111 12333 35567778888889999999999999999885 55555
Q ss_pred HHHHHHHHHHHH-hcccCCCCC--cchHHHH-HHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHH
Q 020441 209 AIAQVVVFLWIL-INYSVTSGV--LGTLYPL-IMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVV 283 (326)
Q Consensus 209 ~i~~~~~~~~~~-l~~~~~~~~--~~~~~~~-~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~ 283 (326)
.++...+.+... .......+. ......+ ...+..+.....+.+....++.+.+|++ +..+.+..+....+|..++
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~ 435 (481)
T TIGR00879 356 AAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIV 435 (481)
T ss_pred HHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHH
Confidence 444443332211 111111100 0012222 2222223333334566677779999976 5678888899999999988
Q ss_pred HHHhhhhh
Q 020441 284 FFIGPYIS 291 (326)
Q Consensus 284 ~~i~~~~~ 291 (326)
..+.+.+.
T Consensus 436 ~~~~~~~~ 443 (481)
T TIGR00879 436 GFLFPTML 443 (481)
T ss_pred HHHHHHHH
Confidence 88876553
No 48
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.57 E-value=6.9e-13 Score=123.40 Aligned_cols=253 Identities=11% Similarity=-0.009 Sum_probs=148.3
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|.+.|++.+..+.+..++..+.. ++|++..|.......++..+|+.++..+... .|||.
T Consensus 98 ~i~~~l~g~~~~~~~~~~~a~~~~~~------------~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~------~g~~~ 159 (382)
T PRK11128 98 FVAIGLFNLFFSPLVPLTDALANTWQ------------KQIGLDYGKVRLWGSIAFVIGSALTGKLVSW------FGEQA 159 (382)
T ss_pred HHHHHHHHHHHcccccHHHHHHHHHH------------hhccCCcchHHHHHHHHHHHHHHHHHHHHHH------cChhH
Confidence 35677888888888876554443331 2456666666666689999999998877542 46888
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.|.+..+...+..+..++.|++++++++ +++ .+ + .+ ++..+.++||+...+....+..+.....+...++
T Consensus 160 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~-~-~~---~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~- 229 (382)
T PRK11128 160 ILWILTAGVASMLLGQLLRPTIMPQGES---RQQ-ES-A-GW---PAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSA- 229 (382)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCcccc---ccc-cc-c-cc---chHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHH-
Confidence 7765543332322222223322111111 110 00 0 01 1223466788776544333322222211212222
Q ss_pred ccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHH
Q 020441 162 EIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMA 239 (326)
Q Consensus 162 ~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (326)
.+..+ .|. ...+....+..+.+.+..++.|++.||+++++ .+..+.+.....+.. +.+.++ ++..++..
T Consensus 230 ~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~-~l~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~ 300 (382)
T PRK11128 230 IYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARD-LLLLSAICGVVRWGL--MGSTTA-----LPWLIVIQ 300 (382)
T ss_pred HHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH-HHHHHHHHHHHHHHH--HHhhhh-----HHHHHHHH
Confidence 23222 343 36788888888889999999999999999885 655565554444322 223333 35566778
Q ss_pred HHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHH-HHHHHHHHHHHHHhhhhh
Q 020441 240 ALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLK-VWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 240 ~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~-~~~~~g~~i~~~i~~~~~ 291 (326)
+++|++.+..++.....+.+..++++....+.++ ..+++|..+++.+...+.
T Consensus 301 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~ 353 (382)
T PRK11128 301 ILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLY 353 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999988888888888765454555666665 555677778888777664
No 49
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.57 E-value=1.1e-12 Score=122.46 Aligned_cols=251 Identities=12% Similarity=0.055 Sum_probs=143.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+....+++.|..+ +++|++..|+.......+..+|++++..+.. ..+||.
T Consensus 95 ~~~~~l~g~~~~~~~~~~~~~i~~~~~----------~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~------~~g~~~ 158 (392)
T PRK10473 95 LAGRFLQGIGAGCCYVVAFAILRDTLD----------DRRRAKVLSLLNGITCIIPVLAPVLGHLIML------KFPWQS 158 (392)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------CcChHH
Confidence 467899999999999988888888877 4589999999988888888888888766543 236887
Q ss_pred hHHHHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHH-HHHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~-~g~~~~f~~~~~ 159 (326)
.|.+..++.++..++. +++|+++++++++ + .+.. ++..+.++|++.+........ ......+. . +
T Consensus 159 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~--~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 225 (392)
T PRK10473 159 LFYTMAAMGILVLLLSLFILKETRPARAPA--A------SSKP---RENSESLLNRFFLSRLVITTLSVTVILTFV-N-T 225 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccCC--c------cchH---HHHHHHHhCHHHHHHHHHHHHHHHHHHHHH-H-h
Confidence 7777665555555443 3444332221111 0 0011 122335667665433222111 11111111 1 1
Q ss_pred ccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 160 TKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 160 ~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
.+.+..+.+|. ...+..+.+.++..+++.++.|++.||+++|+ .+..+.++.....+.... .+.. .....
T Consensus 226 ~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~-~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~ 297 (392)
T PRK10473 226 SPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRT-LMLTSQVLFLAAGITLAL--SPSH-----AVSLF 297 (392)
T ss_pred CHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHH--HHHH-----HHHHH
Confidence 11233333444 36677888899999999999999999999885 666665544433322111 1111 22222
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCC-c-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHD-T-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~-~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
...+.+.+-+...+. ....++.|++ + ..+.+.+.+.|.+|.+++..+.....
T Consensus 298 ~~~l~~~g~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 298 GITLICAGFSVGFGV--AMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHhHH--HHHHHhccCcccccHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 222223322221111 2223344543 3 33455888888888888877776554
No 50
>PRK10504 putative transporter; Provisional
Probab=99.56 E-value=9.7e-13 Score=125.74 Aligned_cols=267 Identities=9% Similarity=-0.011 Sum_probs=160.7
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+....+++.+..|+ ++|++..|+.....+.+..+|+.++-.+.. ..+||.
T Consensus 102 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~------~~gw~~ 165 (471)
T PRK10504 102 LLARVLQGVGGAMMVPVGRLTVMKIVPR----------EQYMAAMTFVTLPGQVGPLLGPALGGLLVE------YASWHW 165 (471)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHcCH----------HHHHHHHHHHHHHHHHHHHhhhHHHHHHHh------hccHHH
Confidence 5689999999999998888888888774 588999999888888999999888766643 246888
Q ss_pred hHHHHHHHHHHHHHHHHHc-cCCcccccc-chhhh--------------chhhh---hH------------------HHH
Q 020441 82 LFIVFLGVITLGTILMCFL-RKEEDKGEK-ETADA--------------SVNFY---SY------------------LVS 124 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l-~~~~~~~~~-~~~~~--------------~~~~~---~~------------------~~~ 124 (326)
.|.+...+..++.++.... |+.+.++++ +.... +..+. .+ .+|
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHA 245 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 7876554455554444333 322211111 10000 00000 00 000
Q ss_pred ----HHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCC
Q 020441 125 ----LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGL 198 (326)
Q Consensus 125 ----~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~ 198 (326)
+-+-..++++||+........+..+...+.. ..+.+.|.+...|. ...++.....+++..++.++.|++.||+
T Consensus 246 ~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~ 324 (471)
T PRK10504 246 RNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGML-PFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF 324 (471)
T ss_pred hcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 0001234677877765544333333221111 11112222223343 3667777888888888889999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHH
Q 020441 199 PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQC 277 (326)
Q Consensus 199 g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~ 277 (326)
++|+ ++..+.........+... ..++.+ .....+..++.|++.+...+..+.+..+..|++ +..+++.+++.+.
T Consensus 325 g~~~-~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 399 (471)
T PRK10504 325 GYRR-VLVATTLGLALVSLLFML-VALLGW---YYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQ 399 (471)
T ss_pred CchH-HHHHHHHHHHHHHHHHHh-cccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHH
Confidence 9885 665565544433222111 111111 122334466778888888888888888888876 4568888899998
Q ss_pred HHHHHHHHHhhhh
Q 020441 278 ASIAVVFFIGPYI 290 (326)
Q Consensus 278 ~g~~i~~~i~~~~ 290 (326)
+|.+++..+...+
T Consensus 400 ~g~~ig~~i~g~l 412 (471)
T PRK10504 400 LSMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888777544
No 51
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.55 E-value=1.6e-12 Score=121.45 Aligned_cols=249 Identities=11% Similarity=-0.011 Sum_probs=142.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++....++.+..+ ++|++..|++.+....+..+|+.++..+... ..+||.
T Consensus 101 l~~r~l~Gig~~~~~~~~~~~~~~~~~-----------~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~-----~~~w~~ 164 (393)
T PRK09705 101 LSSALLGGVGIGIIQAVMPSVIKRRFQ-----------QRTPLVMGLWSAALMGGGGLGAAITPWLVQH-----SETWYQ 164 (393)
T ss_pred HHHHHHHHhHHHHHhhhhhHHHHHHcc-----------ccchhHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCHHH
Confidence 578999999999999887776655544 4789999998888888888888887655432 136887
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK 161 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~ 161 (326)
.+..+....++..+..++.++++++++ + ++ +. +. .+.+++++...+..................+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~----~~-~~-------~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp- 229 (393)
T PRK09705 165 TLAWWALPAVVALFAWWWQSAREVASS-H-KT----TT-TP-------VRVVFTPRAWTLGVYFGLINGGYASLIAWLP- 229 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccc-c-CC----Cc-CC-------cccccCHhHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 665544333333332232322111111 0 00 00 11 1234566554433222222211111111122
Q ss_pred ccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHH
Q 020441 162 EIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMA 239 (326)
Q Consensus 162 ~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (326)
.+..+ .|. ...+....+++++..+++++.|++.||++||+ .+..+..+........ ...+++. .. ...
T Consensus 230 ~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~-~~~~~~~l~~~~~~~~-~~~~~~~-----~~--~~~ 299 (393)
T PRK09705 230 AFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRK-LLMLALVLQLVGFCGF-IWLPLQL-----PV--LWA 299 (393)
T ss_pred HHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchH-HHHHHHHHHHHHHHHH-HHccchH-----HH--HHH
Confidence 23222 343 46788889999999999999999999999885 5555544444333221 1122221 11 122
Q ss_pred HHHhhhhHHhhhhhHhhHHhhccC-C-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 240 ALLGIGDGVLNTQLSALLGILFKH-D-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 240 ~l~G~~d~~~~~~~~~il~~~f~~-~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
++.|++.+...+.......+.+++ + +...++..+....++..+++.+...+.
T Consensus 300 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 300 MVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666555555566653 3 345777777778888888887776664
No 52
>PRK11043 putative transporter; Provisional
Probab=99.55 E-value=4.8e-12 Score=118.36 Aligned_cols=251 Identities=12% Similarity=0.022 Sum_probs=147.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+....+++.|..+ ++++++..+..+....++..+|+.++..+.. ..+||.
T Consensus 98 ~~~~~l~G~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------~~g~~~ 161 (401)
T PRK11043 98 LVLRFVQAVGVCSAAVIWQALVIDRYP----------AQKANRVFATIMPLVALSPALAPLLGAWLLN------HFGWQA 161 (401)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcC----------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------cCChHH
Confidence 467899999988777665566666655 3467788888887788888888888766543 236888
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHH-HHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLF-AYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~-~~~g~~~~f~~~~~~ 160 (326)
.|.+..++.++..+..+++++++++++++ +++.+ ..+.+++|+........ ...+...++. ...+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p 227 (401)
T PRK11043 162 IFATLFAITLLLILPTLRLKPSKKARKQS------QDALT-------FKQLLKSKTYLGNVLIFAACSAAFFAWL-TGSP 227 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCccccc------hHHHH-------HHHHHcChhHHHHHHHHHHHHHHHHHHH-HHhH
Confidence 77766655655555555554332211110 01112 22355666654322111 1111111111 1111
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH-HHHhc--ccCCCCCcchHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WILIN--YSVTSGVLGTLYP 235 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~-~~~l~--~~~~~~~~~~~~~ 235 (326)
.+.+ ..|. ...++.....+++..+++.+.+++.||+++|+ ....+.+....+.. +.... ..++ +...
T Consensus 228 -~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 299 (401)
T PRK11043 228 -FILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQ-LLPWLLVLFAVSVIAIWLASLLSHPS-----LVPL 299 (401)
T ss_pred -HHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHHhccCc-----HHHH
Confidence 1222 2343 36677777788888899999999999998775 33333222222211 11111 1222 2334
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++...++|++.+...+.......+..|+++..+.+.++..+..++..+..+.+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l 354 (401)
T PRK11043 300 LIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSAL 354 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4556677888888888777777777888777788988888776666666665544
No 53
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.55 E-value=2.1e-12 Score=136.21 Aligned_cols=267 Identities=17% Similarity=0.103 Sum_probs=166.6
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++.+|+++|++.+..+.+..+++.+..+ ++++++.+|+..+..+++.++|++++..+... .+|+
T Consensus 111 l~~~~~l~gi~~a~~~p~~~a~l~~~~~----------~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~------~~~~ 174 (1140)
T PRK06814 111 LFAALFLMGIHSALFGPIKYSILPDHLN----------KDELLGANALVEAGTFIAILLGTIIGGLATIS------GNFV 174 (1140)
T ss_pred HHHHHHHHHHHHHhhchHHHHhhHhhcC----------ccccchhhHHHHHHHHHHHHHHHHHHHHHHhc------cccH
Confidence 3578999999999999999999999998 46899999999999999999999999877542 3677
Q ss_pred hhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 81 LLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
..|.....+.+++.++.++++++..+++.. +.+ ....++.......+.+++....+...+....+..+.....+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (1140)
T PRK06814 175 ILVALLMGIAVLGWLASLFIPKTGNAAPDL--KID---RNIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQL- 248 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCCCCCC--eec---cchHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHh-
Confidence 766433333444444555565443221111 000 01111111222234566666554433333322222222222
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhc---ccCCCC-C-----
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN---YSVTSG-V----- 229 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~---~~~~~~-~----- 229 (326)
+.|..+.+|. ...++.+..++++.++++++.|++.|+..+++ .+..+.++.....+...+. ..+... .
T Consensus 249 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 327 (1140)
T PRK06814 249 PLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL-YVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILV 327 (1140)
T ss_pred HHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee-eehHHHHHHHHHHHHHHhcccccccccccccchhh
Confidence 2344444554 36788889999999999999999998766553 3333332222211111111 000000 0
Q ss_pred ----cchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 230 ----LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 230 ----~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...+...+..+++|++.+..+...++++.+..|++ +..+++.+++...+|..++..+...+
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l 393 (1140)
T PRK06814 328 FLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALL 393 (1140)
T ss_pred hhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 01244566778889999999999999999999976 56789988999988888877776555
No 54
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.53 E-value=3.3e-13 Score=128.83 Aligned_cols=266 Identities=13% Similarity=-0.042 Sum_probs=145.5
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+..+++...++.|..|+ ++|++..|+..+..+++..+|+.+...+.... .+||.
T Consensus 135 ~~~r~~~G~~~~~~~~~~~~~~~~~~~~----------~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~-----~gw~~ 199 (465)
T TIGR00894 135 VFCRVIQGLAQGSVSPATHKIIVKWAPP----------KERSRLLGMSTSGFQLGTFIFLPISGWLCESW-----GGWPM 199 (465)
T ss_pred HHHHHHHHHhcccchhhHHHHHHhcCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CCCCe
Confidence 5689999999999999999999999984 58999999999989999999998887664321 26888
Q ss_pred hHHHHHHHHHHHHHHHHHc-cC-Cccccccchhhhc-------hhh-hhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHH
Q 020441 82 LFIVFLGVITLGTILMCFL-RK-EEDKGEKETADAS-------VNF-YSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQ 151 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l-~~-~~~~~~~~~~~~~-------~~~-~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~ 151 (326)
.|.+..+++++..++.+++ ++ |+++++++++|++ .++ +.+.+.. ..+.+++++........+...+.
T Consensus 200 ~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 276 (465)
T TIGR00894 200 IFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYINSSLQGQKGSTRQSLP---IKAIPKSLPVWAIWFAIFGHFWL 276 (465)
T ss_pred ehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhhcccccCCCCCCCC---HHHHhcCHHHHHHHHHHHHHHHH
Confidence 8877665555444444333 32 2111111000000 000 0000001 22355666654443222211111
Q ss_pred HHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhh---H----HHHHHHHHHHHHHHHHhc
Q 020441 152 QAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITF---I----VSGGAIAQVVVFLWILIN 222 (326)
Q Consensus 152 ~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~---i----~~~g~i~~~~~~~~~~l~ 222 (326)
.... ..+.+.|..+.+|.+ ..++...+..++..+++++.|+++||.++|+. . +..+..............
T Consensus 277 ~~~~-~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (465)
T TIGR00894 277 YTIL-PTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALP 355 (465)
T ss_pred HHHH-HHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111 122334544455543 67777788888899999999999997543210 0 111111111111111111
Q ss_pred ccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 223 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...+. .....+...+.+.+.+...........+..|+....+.++.+....+|..+++.+...+
T Consensus 356 ~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~ 419 (465)
T TIGR00894 356 YLSAA----FYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNI 419 (465)
T ss_pred HcCCc----hHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 21221 12223333343444443333333344455565456677788999999988888777654
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.53 E-value=1.1e-12 Score=126.05 Aligned_cols=265 Identities=14% Similarity=0.079 Sum_probs=143.8
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..+.....++.|..++ ++|++..|+......++..+|+.+...+.. .++||.
T Consensus 112 ~~~~~l~G~~~~~~~~~~~~~~~~~~~~----------~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~------~~~w~~ 175 (496)
T PRK03893 112 FIARLVIGMGMAGEYGSSATYVIESWPK----------HLRNKASGFLISGFSIGAVVAAQVYSLVVP------VWGWRA 175 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------cCCHHH
Confidence 5689999999999999988999999884 589999999988889999999888876643 357887
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHH-------HH-------------HHHhhc-------
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLS-------KS-------------ITTLLA------- 134 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------k~-------------~~~~~~------- 134 (326)
.|.+.....++..+....+|++++.+++++.+. +..+..+.. .. ......
T Consensus 176 ~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (496)
T PRK03893 176 LFFIGILPIIFALWLRKNLPEAEDWKEKHAGKA---PVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVA 252 (496)
T ss_pred HHHHHHHHHHHHHHHHHhCCCchhhhhhccccc---cchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 775422111111111112222111011000000 000000000 00 000000
Q ss_pred --------------------chhhHHHHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhh
Q 020441 135 --------------------DVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAG 192 (326)
Q Consensus 135 --------------------~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G 192 (326)
++.............+...+....+.+.+.+...|. .+.+......+++..+++++.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g 332 (496)
T PRK03893 253 VLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGG 332 (496)
T ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000000000011223344334444 4778888999999999999999
Q ss_pred hhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhH
Q 020441 193 RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQ 271 (326)
Q Consensus 193 ~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~ 271 (326)
++.||+++|+ ++..+..+.....++.. ...++. .+...+..++.+.......+..++++.+.+|++ +..+++.
T Consensus 333 ~l~dr~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 406 (496)
T PRK03893 333 FLGDWLGTRK-AYVCSLLISQLLIIPVF-AIGGAN----VWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGF 406 (496)
T ss_pred HHHHHhcchH-HHHHHHHHHHHHHHHHh-hccccH----HHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccch
Confidence 9999999885 55545443332222211 111111 122233333444444344566778889999976 5778888
Q ss_pred HHHHHHHHHHHHHHHhhhhh
Q 020441 272 LKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 272 ~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.....+|..+++.+...+.
T Consensus 407 ~~~~~~~g~~lgp~l~g~l~ 426 (496)
T PRK03893 407 TYNVGALGGALAPILGALIA 426 (496)
T ss_pred hhhhhhHHHHHHHHHHHHHh
Confidence 88888999999988887663
No 56
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.53 E-value=2.7e-12 Score=116.11 Aligned_cols=260 Identities=12% Similarity=0.058 Sum_probs=163.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCC-CC------
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GG------ 74 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~-~~------ 74 (326)
+.+-.+.|.|.+.+-++.+.|++++.+ ++++++..++..+++.+|.++|++++..+..... +.
T Consensus 14 l~~~f~~g~G~~~lq~~~n~~v~~~~~----------~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~ 83 (310)
T TIGR01272 14 LGALFVLASGLTILQVAANPYVSILGP----------IETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVAT 83 (310)
T ss_pred HHHHHHHHhhHHHHHhhHHHHHHHHCC----------cchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhh
Confidence 457789999999999999999999988 4578899999999999999999999987664321 10
Q ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhH-HHHHHHHHHHH
Q 020441 75 ---STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRML-LIIPLFAYSGL 150 (326)
Q Consensus 75 ---~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~l-ll~p~~~~~g~ 150 (326)
..++|+.+|.+...+..+..++..+.+.|+.++++++++.+ .+... + + +.+++|... ..+-.++|.|.
T Consensus 84 ~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~-~~~~~-~---~---~~~~~~~~~l~~~~~f~yvg~ 155 (310)
T TIGR01272 84 ANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSS-GDTTQ-K---T---SAFQFTHLVLGALGIFVYVGA 155 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCccccccccc-ccccc-h---h---hHHhhHHHHHHHHHHHHHHHH
Confidence 11468888876544444444444455544332221111000 00000 0 1 133344333 34556788887
Q ss_pred HHHHHHhhcccccccc--cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCC
Q 020441 151 QQAFVWAEFTKEIVTP--ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT 226 (326)
Q Consensus 151 ~~~f~~~~~~~~~~~~--~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~ 226 (326)
+.+... .+ ..|..+ ..|. ++.+.....+..+.++|+.+.+++.||+++++ ++..+.++.....++ .... +.
T Consensus 156 e~~~~~-w~-~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~-~l~~~~~l~~~~~~l-~~~~-~~ 230 (310)
T TIGR01272 156 EVSAGS-FL-VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGR-YLAFNAFLAVLLSIG-AALT-HG 230 (310)
T ss_pred HHHHHH-HH-HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHH-HHHc-CC
Confidence 766542 11 123322 2343 46777788899999999999999999999875 555554444433222 1111 22
Q ss_pred CCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 227 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 227 ~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.......++.|++.+...+...+...+.+|++...+-+.. ....+|+++.+.+-..+.
T Consensus 231 ------~~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~la 288 (310)
T TIGR01272 231 ------YVAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLA 288 (310)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHH
Confidence 1223345578999999999999999888887654454554 345578888887655553
No 57
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.53 E-value=1e-11 Score=116.87 Aligned_cols=259 Identities=12% Similarity=0.077 Sum_probs=145.6
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++.+|+++|++.+...+....++.|.-+ ++++++..+++.....++..+|..++..+.. ..+||
T Consensus 107 l~~~r~l~Gi~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~------~~gw~ 170 (413)
T PRK15403 107 FLIARFIQGTSICFIATVGYVTVQEAFG----------QTKGIKLMAIITSIVLVAPIIGPLSGAALMH------FVHWK 170 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------hcCHH
Confidence 3578999999988665554455555545 3578899999999999999999988876643 24799
Q ss_pred hhHHHHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhc
Q 020441 81 LLFIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEF 159 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~ 159 (326)
..|.+..++.+++.+.. +++|+.++++++ + . +.++..++..++++||+............... +.+..+
T Consensus 171 ~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~--~-~------~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~-~~~~~~ 240 (413)
T PRK15403 171 VLFAIIAVMGLIAFVGLLLAMPETVKRGAV--P-F------SAKSVLRDFRNVFRNRLFLTGAATLSLSYIPM-MSWVAV 240 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCccccCC--C-C------ChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHh
Confidence 88887766666655443 335543221110 0 0 11122334455778988776443322222111 111122
Q ss_pred ccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhc--ccCCCCCcchHHH
Q 020441 160 TKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN--YSVTSGVLGTLYP 235 (326)
Q Consensus 160 ~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~--~~~~~~~~~~~~~ 235 (326)
.+.+..+..|.+ ..++.......+..+++.+.+++.++..+++ ....+..+........... ..++. +...
T Consensus 241 ~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~-~~~~~~~~~~ig~~l~~~~~~~~~~~----~~~~ 315 (413)
T PRK15403 241 SPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR-FIWRAVPIQLVGLALLIVGNLLWPHV----WLWS 315 (413)
T ss_pred ChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-HHHHHHHHHHHHHHHHHHHHHHcccc----HHHH
Confidence 333444444443 5677666667777788888888765444432 2211211111111111110 12221 1224
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++..++.+++.+...+...+..-.-.++++..+.|.++..+..+...+.....++
T Consensus 316 ~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~ 370 (413)
T PRK15403 316 VLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWL 370 (413)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677888777776666432111222345677788888888888877777665
No 58
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.53 E-value=1.4e-12 Score=122.59 Aligned_cols=271 Identities=13% Similarity=0.017 Sum_probs=147.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.|..+++...++.|..|+ ++||+..|++.....+|..+|+.++..+.......+..+||.
T Consensus 100 ~~~r~l~G~~~~~~~~~~~~~~~~~~~~----------~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~ 169 (412)
T TIGR02332 100 YLLRILVGIAEAGFLPGILLYLTFWFPA----------YFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQW 169 (412)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHcCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhH
Confidence 5789999999999999888889998884 589999999999889999999999876653211112458999
Q ss_pred hHHHHHHHHHHHHH-HHHHccCCccccc---cchhhh-------ch-----hhh--hHHHHHHHHHHHhhcchhhHHHHH
Q 020441 82 LFIVFLGVITLGTI-LMCFLRKEEDKGE---KETADA-------SV-----NFY--SYLVSLSKSITTLLADVRMLLIIP 143 (326)
Q Consensus 82 ~f~~~~~i~~l~~~-l~~~l~~~~~~~~---~~~~~~-------~~-----~~~--~~~~~~~k~~~~~~~~~~~lll~p 143 (326)
.|.+..+.+++..+ ..+++|+++++.+ +++.+. +. ++. ...+..-++.++.+++++..+...
T Consensus 170 ~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (412)
T TIGR02332 170 LFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTL 249 (412)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHH
Confidence 88876555544433 3345654432210 100000 00 000 000000012233334555433332
Q ss_pred HHHHHHHHHHHHHhhcccccccc-cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH
Q 020441 144 LFAYSGLQQAFVWAEFTKEIVTP-ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL 220 (326)
Q Consensus 144 ~~~~~g~~~~f~~~~~~~~~~~~-~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~ 220 (326)
..+.......-. ..+.+.+..+ ..|. ...+......+++..++.++.|+++||+++|+.......++....+.+
T Consensus 250 ~~~~~~~~~~~~-~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~-- 326 (412)
T TIGR02332 250 AYFCLTNTLSAI-NIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLL-- 326 (412)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHH--
Confidence 222111111111 1222223333 1233 356777788889999999999999999987643333333232222211
Q ss_pred hcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 221 INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 221 l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
....++ +........+.+++.....+.......+.+|.+ +..+++..+....+|.++++.+...+
T Consensus 327 ~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i 392 (412)
T TIGR02332 327 ASATDH-----NLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGIL 392 (412)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccc
Confidence 111222 122222222223322222222233334567765 56689999999999999988776544
No 59
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.52 E-value=2.4e-12 Score=128.13 Aligned_cols=109 Identities=12% Similarity=0.070 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhh
Q 020441 174 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQL 253 (326)
Q Consensus 174 ~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~ 253 (326)
....++.+++.+++.++.|.+.||+|||+ ++.++.++.+++.++ +.+.++. ...++..+++|++.+...+..
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~-~l~~~~~lsai~~ll--~~~~~s~-----~~ll~~~~l~g~~~~~~~~~~ 669 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLR-MLAGSMVLSCISCFF--LSFGNSE-----SAMIALLCLFGGLSIAAWNAL 669 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHH--HHHHccH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 34466778889999999999999999995 666666655544322 1223331 334444566777777777889
Q ss_pred HhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 254 SALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 254 ~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++++++++|++ |..+++..+....+|+.+++.+.+.+
T Consensus 670 ~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L 707 (742)
T TIGR01299 670 DVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSF 707 (742)
T ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987 67799999999999999999988655
No 60
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.52 E-value=2e-12 Score=123.22 Aligned_cols=262 Identities=11% Similarity=0.019 Sum_probs=151.6
Q ss_pred hHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhH
Q 020441 4 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLF 83 (326)
Q Consensus 4 a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f 83 (326)
.|+++|++.|..+.....++.+.-+ ++|++..|+......++..+|+.+.-.+.. ..+||..|
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~-----------~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~------~~gwr~~f 176 (455)
T TIGR00892 114 AGFITGLGLAFNFQPSLTMLGKYFY-----------RRRPLANGLAMAGSPVFLSTLAPLNQYLFE------SFGWRGSF 176 (455)
T ss_pred HHHHHHhcchhhhhHHHHHHHHHHH-----------hhHHHHHHHHHhcccHHHHHHHHHHHHHHH------HhChHHHH
Confidence 4688899988776554444444443 478999999988888888888777655533 24699888
Q ss_pred HHHHHHHHHHHHHHHHccCCccc----ccc--chhhh--chhh--hhHHHHHHHHH--HHhhcchhhHHHHHHHHHHHHH
Q 020441 84 IVFLGVITLGTILMCFLRKEEDK----GEK--ETADA--SVNF--YSYLVSLSKSI--TTLLADVRMLLIIPLFAYSGLQ 151 (326)
Q Consensus 84 ~~~~~i~~l~~~l~~~l~~~~~~----~~~--~~~~~--~~~~--~~~~~~~~k~~--~~~~~~~~~lll~p~~~~~g~~ 151 (326)
.+..++.++..+..++++++..+ +++ ++.+. ..++ .....++.++. ++++++|+........+..+..
T Consensus 177 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 256 (455)
T TIGR00892 177 LILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLG 256 (455)
T ss_pred HHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHH
Confidence 87766665555444444432111 000 00000 0000 00111111111 3567787765544322222211
Q ss_pred HHHHHhhcccccccc-cccchhhHHHHHHHHHHHHHHHhhhhhhccCC--CChhh-HHHHHHHHHHHHHHHHHhcccCCC
Q 020441 152 QAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL--PSITF-IVSGGAIAQVVVFLWILINYSVTS 227 (326)
Q Consensus 152 ~~f~~~~~~~~~~~~-~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~--g~~~~-i~~~g~i~~~~~~~~~~l~~~~~~ 227 (326)
.......++ .+..+ ..+....+....+.+++..+++++.|++.||. ++++. .+..+.+......++ ....++
T Consensus 257 ~~~~~~~l~-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll--~~~~~~- 332 (455)
T TIGR00892 257 FFAPIIFLV-PYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLL--CALAGD- 332 (455)
T ss_pred ccchHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHH--HHHhch-
Confidence 100111111 22222 22234778888899999999999999999973 22311 222222222222111 122232
Q ss_pred CCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 228 GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 228 ~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++..++..+++|++.+...+..++++.+.+|++ +..+++.++..+++|..+++.+...+
T Consensus 333 ----~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l 392 (455)
T TIGR00892 333 ----YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRL 392 (455)
T ss_pred ----HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeee
Confidence 245566788889999998899999999999876 47789999999999999999888655
No 61
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.51 E-value=1.3e-12 Score=125.13 Aligned_cols=289 Identities=13% Similarity=0.088 Sum_probs=148.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc---CCCCCCCCC
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK---DDKGGSTSG 78 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~---~~~~~~~~~ 78 (326)
+.+|+++|++.+.... ...++++..+ +++||+..|+..+..+.+..+|+.+...+.. .....+..+
T Consensus 128 ~~~r~l~G~~~~~~~~-~~~~i~~~~~----------~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~g 196 (476)
T PLN00028 128 IAVRFFIGFSLATFVS-CQYWMSTMFN----------GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTA 196 (476)
T ss_pred HHHHHHHHHHHHhhHH-HHHHHHHhcC----------hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhh
Confidence 4678999999886443 3345677776 3589999999887777888877766644322 110011247
Q ss_pred chhhHHHHHHHHHHHHHHHHHccCCccccc-cchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHH-HHHHHHHHHH
Q 020441 79 TTLLFIVFLGVITLGTILMCFLRKEEDKGE-KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFA-YSGLQQAFVW 156 (326)
Q Consensus 79 ~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~-~~g~~~~f~~ 156 (326)
||..|.+..+++++..++.+++++..++.+ ++..++...++.+..+. ..+.+++++..++...+. ..+....+.
T Consensus 197 Wr~~f~i~g~l~l~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 272 (476)
T PLN00028 197 WRIAFFVPGLLHIIMGILVLTLGQDLPDGNYRELKKSGTMPKDSFSKV---LRYGVTNYRTWILALTYGYSFGVELTMD- 272 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCcCCCCchhhHHhcCccccccHHHH---HHHHHcCchhHHHHHHHHHHHHHHHHHH-
Confidence 999888776666555555444442211111 01000000011122222 223566777544332221 111111111
Q ss_pred hhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChh----h--HHHHHHHHHHHHHHHHHhcccCCCC
Q 020441 157 AEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSIT----F--IVSGGAIAQVVVFLWILINYSVTSG 228 (326)
Q Consensus 157 ~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~----~--i~~~g~i~~~~~~~~~~l~~~~~~~ 228 (326)
+.. +.+..+..|. ...+....+.+++..++.++.|+++||++||. + +......+.....+ .+...++
T Consensus 273 ~~~-p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~--~~~~~~~-- 347 (476)
T PLN00028 273 NII-AEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCI--WLGRANS-- 347 (476)
T ss_pred hHH-HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHH--Hhcccch--
Confidence 111 1233333444 46778888899999999999999999987541 1 11111111111111 1222222
Q ss_pred CcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHH
Q 020441 229 VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI---SLQAMLIVMVVGICV 305 (326)
Q Consensus 229 ~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~---~~~~~~~~~~~~~~~ 305 (326)
.....+..++++++.+..++..+++..+..|+++..+.+..+....+|+.++..+-..- ......++..+++++
T Consensus 348 ---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i 424 (476)
T PLN00028 348 ---LGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIA 424 (476)
T ss_pred ---HHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHH
Confidence 12233334445555444444455555566666566677766666666666665543210 122223344445556
Q ss_pred HHHHHHHH
Q 020441 306 ALVGILFL 313 (326)
Q Consensus 306 ~~~~~~~~ 313 (326)
+.++.+.+
T Consensus 425 ~~~~~~~~ 432 (476)
T PLN00028 425 CTLPVAFI 432 (476)
T ss_pred HHHHHHhe
Confidence 66665555
No 62
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.51 E-value=7.4e-12 Score=116.82 Aligned_cols=255 Identities=16% Similarity=0.068 Sum_probs=142.7
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|++.+...+....+..+..+ ++++++..++.......+..+|+.++..+.. ..+||.
T Consensus 100 ~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~------~~g~~~ 163 (394)
T PRK11652 100 IAASAIQGLGTGVGGVMARTLPRDLYE----------GTQLRHANSLLNMGILVSPLLAPLIGGLLTT------LFGWRA 163 (394)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHhcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------ccChHH
Confidence 467899999988776655445444444 3478888887777777778888877765532 246888
Q ss_pred hHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
.|.+..++..+..++ .+++|+++++++ + +.+.++.. .+.+++|+........+........+... .
T Consensus 164 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 230 (394)
T PRK11652 164 CYLFLLLLGAGVTFSMARWMPETRPADA-R--------RTRVLASY---RTLLSNRRFNCYLLMLIGTLAGIAVFEAC-S 230 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCcccc-c--------hhHHHHHH---HHHHcChHHHHHHHHHHHHHHHHHHHHHh-C
Confidence 776654444333332 334443222111 1 00112222 22455665432221111111111111111 1
Q ss_pred cccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHH-HHHHHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 161 KEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVS-GGAIAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 161 ~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~-~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
+.+.++.+|.+ ..++......++..+++++.+++.||.+++. ... .......... +......... .+....
T Consensus 231 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~ 304 (394)
T PRK11652 231 GVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM-WQSVICCLLAGLLM-WIPGWFGVMN----VWTLLV 304 (394)
T ss_pred hHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHhcccc----HHHHHH
Confidence 12333334433 5677777778888889999999999877332 211 1111111111 1110111111 234555
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
..+++|++.+..++...+...+.+|+++..+.+..+..+.+|.+++..+...+.
T Consensus 305 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 305 PAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 667888888888888888888888877766778888888999998888876654
No 63
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.51 E-value=4.6e-13 Score=123.23 Aligned_cols=266 Identities=13% Similarity=0.054 Sum_probs=149.6
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHH-HHHHHHhcCCCCCCCCCch
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGN-LITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~-li~~~~~~~~~~~~~~~~~ 80 (326)
+..|+++|++.+..++...+++.|..+ +++|++..|+.....+.+..+|+ ++...+.. ..+||
T Consensus 87 ~~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~ 150 (379)
T TIGR00881 87 AALWALNGIFQGMGWPPCGRTVTKWFS----------RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE------LYSWH 150 (379)
T ss_pred HHHHHHHHhhccccCCchHHHHHHhcC----------HhhheeeEeehhccchhHHHHHHHHHHHHHHh------cCCch
Confidence 467999999999999999999999888 45899999998888889998888 45544432 24688
Q ss_pred hhHHHHHHHHHHHHHHH-HHccCCcccc---cc-----chhhh---ch-hhhhHHHHHHHHHHHhhcchhhHHHHHHHHH
Q 020441 81 LLFIVFLGVITLGTILM-CFLRKEEDKG---EK-----ETADA---SV-NFYSYLVSLSKSITTLLADVRMLLIIPLFAY 147 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~-~~l~~~~~~~---~~-----~~~~~---~~-~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~ 147 (326)
..|.+..++.++..++. +++|++++++ ++ ++.++ +. ++..+.++ ...+.+++|+...+....+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 227 (379)
T TIGR00881 151 WVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQI---FLQYVLLNKVLWYISLGYVF 227 (379)
T ss_pred hHHHHHHHHHHHHHHHHheeeCCCccccccCccccCcccccccccccccccccchHH---HHHHHHhcchHHHHHHHHHH
Confidence 77766554444443333 3344322111 00 00000 00 00011111 12234566665443322221
Q ss_pred HHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCC-ChhhHHHHHHHHHHHHHHHHHhccc
Q 020441 148 SGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLP-SITFIVSGGAIAQVVVFLWILINYS 224 (326)
Q Consensus 148 ~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g-~~~~i~~~g~i~~~~~~~~~~l~~~ 224 (326)
........ ..+.+.+..+..|. .+.+....+.+++..++.++.|++.||.. +++..+..............+ ...
T Consensus 228 ~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 305 (379)
T TIGR00881 228 VYVVRTGI-LDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVY-WLN 305 (379)
T ss_pred HHHHHHHH-HHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH-hcC
Confidence 11111111 11122233334444 36778888899999999999999999753 332122111111111111111 111
Q ss_pred CCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 225 VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 225 ~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+..+ .....+..++.|+......+....+..+.+|++ +..+.+.++....+|..+++.+...+.
T Consensus 306 ~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~ 370 (379)
T TIGR00881 306 PAAN---PLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLA 370 (379)
T ss_pred cchh---HHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHH
Confidence 2211 233444556667655555566677888999876 577889999999999998888776553
No 64
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.51 E-value=3.8e-12 Score=120.67 Aligned_cols=265 Identities=9% Similarity=-0.032 Sum_probs=141.6
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
...|++.|++.|..|.....++.|..| +++||+.+|+.....+.+..+|+.+....... ..+||.
T Consensus 122 ~~~~~l~g~~~g~~~~~~~~~i~~~~~----------~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~w~~ 186 (438)
T TIGR00712 122 FVLLFLNGWFQGMGWPPCGRTMVHWWS----------QSERGTIVSIWNCAHNIGGGIPPLLVLLGMAW-----FNDWHA 186 (438)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHhcC----------cccchhHHHHHHHHHHhHhHHHHHHHHHHHHH-----hhhhHH
Confidence 356888999999999877778888777 46899999999888888888887765443221 136888
Q ss_pred hHHHHHHHHHHHH-HHHHHccCCcccc---ccchhh--------hchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 020441 82 LFIVFLGVITLGT-ILMCFLRKEEDKG---EKETAD--------ASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 149 (326)
Q Consensus 82 ~f~~~~~i~~l~~-~l~~~l~~~~~~~---~~~~~~--------~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g 149 (326)
.|.+..++.++.. +..+++|+++++. +.++.+ ++.+++.+.++.+++ +.++|++............
T Consensus 187 ~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 264 (438)
T TIGR00712 187 ALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQ--YVLPNKLLWYIAIANVFVY 264 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhcccccccccccccccccchHHHHHH--HHccCchHHHHHHHHHHHH
Confidence 8877665555544 3345555432211 000000 000011112222221 3567776654432221111
Q ss_pred -HHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHH--HHHHHHHhccc
Q 020441 150 -LQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV--VVFLWILINYS 224 (326)
Q Consensus 150 -~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~--~~~~~~~l~~~ 224 (326)
...++ ..+.+.+.++..|. ...+.....+++...++.++.|++.||+++++... .+..... ...+..+. ..
T Consensus 265 ~~~~~~--~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~~~~~~~-~~ 340 (438)
T TIGR00712 265 LLRYGV--LDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGA-TGVFFMTLVTIAVIVYW-MN 340 (438)
T ss_pred HHHHHH--HHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccH-HHHHHHHHHHHHHHHHH-hc
Confidence 11111 12223344444444 35677788888899999999999999985432122 2221111 11111111 11
Q ss_pred CCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHH-HHHHHHHhhhh
Q 020441 225 VTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCAS-IAVVFFIGPYI 290 (326)
Q Consensus 225 ~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g-~~i~~~i~~~~ 290 (326)
+... .+......+.+|++-............+.+|++ +..+.+.++....+| .++++.+.+.+
T Consensus 341 ~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l 405 (438)
T TIGR00712 341 PAGN---PLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYT 405 (438)
T ss_pred CCCc---hHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHH
Confidence 2111 122223333444432222223335567888865 567888777776665 45666665544
No 65
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.50 E-value=1.7e-11 Score=115.89 Aligned_cols=260 Identities=15% Similarity=0.090 Sum_probs=141.3
Q ss_pred HhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc-CCCCCCCCCchhhHH
Q 020441 6 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDKGGSTSGTTLLFI 84 (326)
Q Consensus 6 ~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~-~~~~~~~~~~~~~f~ 84 (326)
++.|++.+...+...++..|..++ +++|++..++.......|..+++.+...+.. ..++.+..+||..+.
T Consensus 107 ~~~~~~~~~~~~~~~al~~~~~~~---------~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~ 177 (437)
T TIGR00792 107 ILLGLFYSFVNIPYWSLVPAITLD---------PRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFAL 177 (437)
T ss_pred HHHHHHHHhhcccHhhCcccccCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHH
Confidence 344444444444444444444432 3578888887766666666555554332221 111123467998777
Q ss_pred HHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccccc
Q 020441 85 VFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEI 163 (326)
Q Consensus 85 ~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~ 163 (326)
+..+++.+..++. +++|+++++++++ + +++.+.++.+|+ +++||+...+....+........... +..-+
T Consensus 178 i~~~l~~~~~~~~~~~~~e~~~~~~~~--~---~~~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 248 (437)
T TIGR00792 178 VLALIGVVSLIICFFGTKERYSEIPKN--I---EKKLSLKQIFKA---LFKNDQLLILCLAYLFYNLAFNIKNG-VQVYY 248 (437)
T ss_pred HHHHHHHHHHHHHHcCCEecCCCCCcc--c---ccCCCHHHHHHH---HhCCHHHHHHHHHHHHHHHHHHHHcc-hhhee
Confidence 6655554444333 2333322111111 0 112234444443 45677765443222222221111111 11112
Q ss_pred ccccccc-hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH
Q 020441 164 VTPALGV-SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL 242 (326)
Q Consensus 164 ~~~~lg~-~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 242 (326)
.+..++. ...+....+..++..++.++.|++.||+|+|+ ++..+.++.....+... +.+++ .+..++..++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~-~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~ 321 (437)
T TIGR00792 249 FTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKI-LFAGGILLMVLGYLIFF--FAGSN----LPLILVLIILA 321 (437)
T ss_pred EeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHH--Hcchh----HHHHHHHHHHH
Confidence 2223332 24455666778889999999999999999885 66666655554433222 12221 24445666778
Q ss_pred hhhhHHhhhhhHhhHHhhcc-------CC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 243 GIGDGVLNTQLSALLGILFK-------HD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 243 G~~d~~~~~~~~~il~~~f~-------~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
|++.+..++..++++++..| ++ +..+++.+++.+.+|.+++..+...+
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~l 377 (437)
T TIGR00792 322 GFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLI 377 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89998888888888888754 22 24467788888888888887776544
No 66
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.50 E-value=1.4e-12 Score=118.48 Aligned_cols=231 Identities=17% Similarity=0.206 Sum_probs=160.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++....++.|..| +++|++..++.....+.+..+|+.++..+... .+||.
T Consensus 91 ~~~~~l~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~ 154 (352)
T cd06174 91 LVGRFLLGLGGGALYPAAAALIAEWFP----------PKERGRALGLFSAGFGLGALLGPLLGGLLAES------LGWRW 154 (352)
T ss_pred HHHHHHHHcccccccHhHHHHHHHhCC----------ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH------hhHHH
Confidence 467999999999999999999999998 46899999999999999999999998877543 24777
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHH-HHHHHHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p-~~~~~g~~~~f~~~~~~ 160 (326)
.|.+...+.+++.++..+++ |+...... .++.......+. .+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~--~~~ 198 (352)
T cd06174 155 LFLILAILGLLLALLLLFLL----------------------------------RLLLLLALAFFLLSFGYYGLL--TYL 198 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHHhHHHHHH--HHH
Confidence 77766655665555554443 11111111 111111111111 111
Q ss_pred ccccccccc--chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALG--VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg--~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+.+..+..| ..+.+......+++..++.++.|++.||++||+..+..+..+.....+.. ...++ ++..++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~-----~~~~~~~ 271 (352)
T cd06174 199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLL--ALAPS-----LALLLVA 271 (352)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH--HHhcc-----HHHHHHH
Confidence 122222223 34678888999999999999999999999988414555555544443321 12222 2556777
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.++.|++.+..++...+...+..|++ +...++.++..+.+|..++..+...+.
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~ 325 (352)
T cd06174 272 LLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL 325 (352)
T ss_pred HHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88999999999999999999999965 577899999999999999999987664
No 67
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.50 E-value=1.5e-11 Score=113.88 Aligned_cols=249 Identities=12% Similarity=0.112 Sum_probs=134.6
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++.+|+++|++.+..+ ...+.+.|..| +++|++..++......+|..+|++++..+.. ..+||
T Consensus 82 l~~~R~l~G~g~~~~~-~~~~~~~~~~~----------~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~------~~gWr 144 (368)
T TIGR00903 82 LLACQLLAALGQPFLL-NAFAPAASQIR----------EERRDLVISLLSFAMYLGIIFALAAGLKIYT------AGGLQ 144 (368)
T ss_pred HHHHHHHHHhHhHHHH-HHHHHHHHHcC----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------ccchH
Confidence 3578999999999755 44445577777 4689999999999999999999988877753 35799
Q ss_pred hhHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHH-HHHHHHHHHhh
Q 020441 81 LLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAE 158 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~-~g~~~~f~~~~ 158 (326)
..|.+..+++.+..++ .+++|++++++++. .+ .+ +..++..++++||+...+....+. .....++ ..
T Consensus 145 ~~f~~~~~l~~~~~~~~~~~lp~~p~~~~~~---~~--~~----~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~--~~ 213 (368)
T TIGR00903 145 LLIIPIAAVAAAGIILVLAALPALPFQAAEG---FG--FK----DAVKEFGALAGRKDLWIIGAILGFGVALFDNL--AI 213 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC---cc--hH----HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH--HH
Confidence 8887665555554443 34555432221110 00 00 111234456778777554322221 1111111 11
Q ss_pred cccccccccccch-hhHHHHHHHHHHHHHHHhhhhhhccCC---CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHH
Q 020441 159 FTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGL---PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY 234 (326)
Q Consensus 159 ~~~~~~~~~lg~~-~~~~~~~~~gi~~~i~~~~~G~l~d~~---g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~ 234 (326)
+.+.+..+ .|.+ ..+....+..+...++. +.+.||. ++|+........+...... .+....+. ..
T Consensus 214 wlp~~L~~-~g~s~~~~~~~~l~~~~g~~g~---~~~~d~~~r~~~r~~~~~~~~~~~a~~~~--~~~~~~~~-----~~ 282 (368)
T TIGR00903 214 WLEAALRP-AGLEDIAGDAVALAILAGLIGV---AVIPDRVARAGLRSIYIRAAALLIAAFFL--ALAFELNR-----LA 282 (368)
T ss_pred HHHHHHHH-CCCChHHHHHHHHHHHHHHHHH---HHhhHHhhhhhhHHHHHHHHHHHHHHHHH--HHHHcccc-----HH
Confidence 22233322 2332 23333444444444443 5555554 3332122212222222111 11222221 23
Q ss_pred HHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 235 PLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 235 ~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
......+.+++.....+..+++..|.+|++ +.++.+..+....+|+.+++..-+
T Consensus 283 ~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~ 337 (368)
T TIGR00903 283 LFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAM 337 (368)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHH
Confidence 333444455555555566778999999986 577888888877777766555554
No 68
>PRK10054 putative transporter; Provisional
Probab=99.50 E-value=3.8e-12 Score=119.06 Aligned_cols=252 Identities=13% Similarity=0.087 Sum_probs=149.0
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL 82 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~ 82 (326)
..+.+.|.+.+..+....++..|..+ +++|++..|+.....+++..+|+.++..+.. .+|+..
T Consensus 101 ~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-------~g~~~~ 163 (395)
T PRK10054 101 LFFALINCAYSVFSTVLKAWFADNLS----------STSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-------QSINLP 163 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC----------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hccCcH
Confidence 34566676666666655566666655 4589999999999999999999999876642 247777
Q ss_pred HHHHHHHHHHHHHHH-HHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHH-H--HHhh
Q 020441 83 FIVFLGVITLGTILM-CFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQA-F--VWAE 158 (326)
Q Consensus 83 f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~-f--~~~~ 158 (326)
|.+..++.+++.++. +++++++++++++ + +.. + +..+.++||+.+......+...+..+ + +...
T Consensus 164 f~~~~~~~~i~~i~~~~~~~~~~~~~~~~--~-----~~~-~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 231 (395)
T PRK10054 164 FWLAAICSAFPLVFIQIWVQRSEKAIATE--T-----GSV-W----SPSVLLQDKALLWFTCSGFLASFVSGAFASCISQ 231 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccc--h-----hhh-h----hhhhhccCceehHHHHHHHHHHHHHHHhhhhHHH
Confidence 776655555554333 4454332221111 0 000 1 11235677776544322222111111 1 1122
Q ss_pred cccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 159 FTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 159 ~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+.........+.+.++....++++......+..|++.||+++|+ .+..+.++....+... ....++ .+...+.
T Consensus 232 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~l~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~ 304 (395)
T PRK10054 232 YVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRP-LMTAGTLCFVIGLVGF-IFSGNS-----LLLWGMS 304 (395)
T ss_pred HHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchh-HHHHHHHHHHHHHHHH-HHcchH-----HHHHHHH
Confidence 21111111222335667777777777788888999999999885 6555655444433221 111122 2334556
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+++|++++...+..++.+.+..|++ +...++.++ ...+|.++++.+...+.
T Consensus 305 ~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~ 357 (395)
T PRK10054 305 AAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVIL 357 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHH
Confidence 77889999888888888998988876 455677555 44578888888877664
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.50 E-value=3.1e-12 Score=120.54 Aligned_cols=232 Identities=11% Similarity=0.043 Sum_probs=133.0
Q ss_pred chhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccc-hhhhchhhh
Q 020441 41 VIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKE-TADASVNFY 119 (326)
Q Consensus 41 ~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~ 119 (326)
++|+..|......++|..+|+.++..+.. .+|+.+|.+..++.++..++.+++++++++++++ ++++++.+
T Consensus 138 ~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 209 (420)
T PRK09528 138 RSGFEYGRARMWGSLGWALCAFIAGILFN-------INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANALGANAS- 209 (420)
T ss_pred hccccchhhHHhhhHHHHHHHHHHHHHHh-------cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccchhcccc-
Confidence 45667777777778899999888765532 2466677665545555554554544333222111 00111011
Q ss_pred hHHHHHHHHHHHhhcchhhHHHHHHHHHH-HHHHHH--HHhhc-ccccccccccchhhHHHHHHHHHHHHHHHhhhhhhc
Q 020441 120 SYLVSLSKSITTLLADVRMLLIIPLFAYS-GLQQAF--VWAEF-TKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLT 195 (326)
Q Consensus 120 ~~~~~~~k~~~~~~~~~~~lll~p~~~~~-g~~~~f--~~~~~-~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~ 195 (326)
++..++..+.++||+...+....+.. .....+ ....+ .+.+.....+....+.+..+.++.+.++.++.|++.
T Consensus 210 ---~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 286 (420)
T PRK09528 210 ---AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFII 286 (420)
T ss_pred ---cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11233445577788764433211111 111111 01111 111111123334667888888899999999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhh-HHH
Q 020441 196 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFA-QLK 273 (326)
Q Consensus 196 d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa-~~~ 273 (326)
||+++|+ .+..+.++......+ +.+.++ ++......++.|++.+.........+.+.+|++. ...++ .++
T Consensus 287 dr~g~~~-~~~~~~~l~~~~~~l--~~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 358 (420)
T PRK09528 287 NRIGAKN-ALLLAGTIMAVRIIG--SGFATG-----PLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQ 358 (420)
T ss_pred HHhCcch-hhHHHHHHHHHHHHH--HHhccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHH
Confidence 9999986 555544443333222 223333 2445566778888888877777788888898764 44555 377
Q ss_pred HHHHHHHHHHHHHhhhhh
Q 020441 274 VWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 274 ~~~~~g~~i~~~i~~~~~ 291 (326)
....+|..+++.+...+.
T Consensus 359 ~~~~lg~~ig~~~~G~l~ 376 (420)
T PRK09528 359 FAKQLGAVFLSTLAGNLY 376 (420)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 778888888888776653
No 70
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.49 E-value=8.9e-12 Score=117.54 Aligned_cols=232 Identities=12% Similarity=0.082 Sum_probs=123.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHh-----c---CCC-
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL-----K---DDK- 72 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~-----~---~~~- 72 (326)
+..|++.|++ |..|.+....+++.-| +++||+..|++.+.-++|..+++++...+. . ...
T Consensus 132 li~r~l~Gig-g~~f~~~~~~vs~wfp----------~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~ 200 (462)
T PRK15034 132 IVIALLCGFA-GANFASSMGNISFFFP----------KAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGV 200 (462)
T ss_pred HHHHHHHHHH-HHhHHHHHHHHHHHCC----------HhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 5679999998 7788888778888777 358999999997666777776666554321 1 000
Q ss_pred ---CCCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHH
Q 020441 73 ---GGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSG 149 (326)
Q Consensus 73 ---~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g 149 (326)
.++..+||..+.++..+.++..++.++..++++++ +.+. ++..+.+|+|+.-++. .+|..
T Consensus 201 ~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~-----------~~~~----~~~~~vlk~~~~Wlls--lly~~ 263 (462)
T PRK15034 201 PQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS-----------RASI----ADQLPVLQRLHLWLLS--LLYLA 263 (462)
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc-----------ccCH----HHHHHHhCCCchhHHH--HHHHH
Confidence 11234577666666655555555555543221111 1112 2344477888765443 22222
Q ss_pred HHHHHH-HhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCC
Q 020441 150 LQQAFV-WAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSG 228 (326)
Q Consensus 150 ~~~~f~-~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~ 228 (326)
...+|. .+.+.+.+..+..+.........+..+...+..|++|+++||+|+++ ++..+.+..+++....++..+++..
T Consensus 264 tFG~fvg~s~~lp~~~~~~~~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~-vl~~~~i~~~i~~~~~~l~lp~~~~ 342 (462)
T PRK15034 264 TFGSFIGFSAGFAMLAKTQFPDVNILRLAFFGPFIGAIARSVGGAISDKFGGVR-VTLINFIFMAIFSALLFLTLPGTGS 342 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchH-HHHHHHHHHHHHHHHHHHHhccccc
Confidence 222222 11111122222221112222344556778889999999999999985 6555554444332222222222210
Q ss_pred CcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC
Q 020441 229 VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 263 (326)
Q Consensus 229 ~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~ 263 (326)
.......+..+.+.++.+.-|...+-++.+.||+
T Consensus 343 -~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~ 376 (462)
T PRK15034 343 -GNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQ 376 (462)
T ss_pred -cHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhh
Confidence 0112233333333455555566666677777774
No 71
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.48 E-value=1.2e-12 Score=120.66 Aligned_cols=261 Identities=11% Similarity=0.065 Sum_probs=135.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcC----CCCCCCC
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD----DKGGSTS 77 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~----~~~~~~~ 77 (326)
+.+|+++|++.+. +.....++++..+ +++|++..++.....+.+..+|+.++..+... .++....
T Consensus 95 ~~~~~~~g~~~~~-~~~~~~~~~~~~~----------~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~ 163 (366)
T TIGR00886 95 LLLRLFIGIAGGS-FASCMPWISFFFP----------KKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHL 163 (366)
T ss_pred HHHHHHHHHhchh-hHhHHHHHHHhcC----------HhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccc
Confidence 4689999998654 5555667777777 45899999988877788888887776544321 1111223
Q ss_pred CchhhH-HHHHHHHHHH-HHHHHHccCCccccccchh-hhchhhhhHHHHHHHHHHHhhcchhhHHHHHH-HHHHHHHHH
Q 020441 78 GTTLLF-IVFLGVITLG-TILMCFLRKEEDKGEKETA-DASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQA 153 (326)
Q Consensus 78 ~~~~~f-~~~~~i~~l~-~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~-~~~~g~~~~ 153 (326)
+||..| +....+..+. .+...+.++..++++++++ +.+..+....++..++..+.+++|+...+... +...+....
T Consensus 164 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (366)
T TIGR00886 164 AWGWAFVIVPAGILLLPALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLG 243 (366)
T ss_pred cccchhHHHHHHHHHHHHHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHH
Confidence 677666 3322222222 2233334332211111100 00000000011122244556777776543322 222222222
Q ss_pred HHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 020441 154 FVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG 231 (326)
Q Consensus 154 f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~ 231 (326)
+. +.+ +.+.++..|. .+.+....+.++...++.++.|++.||+++|+ .+..+............+...++.+
T Consensus 244 ~~-~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--- 317 (366)
T TIGR00886 244 VS-SIF-AMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGAR-KLLMSFLGVAMGAFLVVLGLVSPLS--- 317 (366)
T ss_pred HH-HHH-HHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccch-hHHHHHHHHHHHHHHHHhcCCCcch---
Confidence 11 111 2244444454 36677778888889999999999999999874 4444443333322221122222101
Q ss_pred hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHH
Q 020441 232 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS 279 (326)
Q Consensus 232 ~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g 279 (326)
....++...+.++.-+..++..+.+..+.+|+++..+.+..+....+|
T Consensus 318 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 318 LAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLG 365 (366)
T ss_pred HHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCC
Confidence 233333334444445555556667777888876666777666655443
No 72
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=1.4e-11 Score=115.15 Aligned_cols=218 Identities=13% Similarity=0.053 Sum_probs=119.0
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhH
Q 020441 43 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSY 121 (326)
Q Consensus 43 g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~ 121 (326)
+.+.++..+..+++.++|+.++..+... .|||..|.+...+.++..+. .+++|+..+++++++. +.
T Consensus 142 ~~~~~~~~~~~~lg~~~g~~i~~~l~~~------~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-- 208 (393)
T PRK15011 142 VMFSSFLRAQVSLAWVIGPPLAYALAMG------FSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELPLATG-----TL-- 208 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHh------cChHHHHHHHHHHHHHHHHHHHhhcCccCCCCccccc-----cc--
Confidence 4566777777788999998888776432 37998887665444444433 3345543222211100 00
Q ss_pred HHHHHHHHHHhhcchhh-HHHH-HHHHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccC
Q 020441 122 LVSLSKSITTLLADVRM-LLII-PLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG 197 (326)
Q Consensus 122 ~~~~~k~~~~~~~~~~~-lll~-p~~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~ 197 (326)
+. ..++++. +... ......+....+ ..+.+.+.++.+|.+ +.+.......+...++.++.|++.||
T Consensus 209 --~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr 278 (393)
T PRK15011 209 --EA------PRRNRRDTLLLFVICTLMWGTNSLY--IINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR 278 (393)
T ss_pred --cc------cccccccHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 0112221 1111 011111211111 112223444444543 56666666667778889999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHH
Q 020441 198 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQC 277 (326)
Q Consensus 198 ~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~ 277 (326)
++||+ .+..+.+.....+.. +...++ +....+..++.+++.+...+..+....+.+|+++..+.+.++....
T Consensus 279 ~g~~~-~~~~~~~~~~~~~~~--~~~~~~-----~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~ 350 (393)
T PRK15011 279 LGKRF-LMRVAAVAGVCFYAG--MLMAHS-----PAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSR 350 (393)
T ss_pred hChHH-HHHHHHHHHHHHHHH--HHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 99885 555454433322221 112222 2333333444445545444555666788899877778888888888
Q ss_pred HHHHHHHHHhhhhh
Q 020441 278 ASIAVVFFIGPYIS 291 (326)
Q Consensus 278 ~g~~i~~~i~~~~~ 291 (326)
+|..++..+...+.
T Consensus 351 lg~~~g~~l~G~i~ 364 (393)
T PRK15011 351 VGWIIAGSLAGIVA 364 (393)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888888887664
No 73
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.48 E-value=8.6e-12 Score=117.43 Aligned_cols=274 Identities=16% Similarity=0.066 Sum_probs=144.9
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++.+|++.|+..|+.-..+.-|++|++|+ +.||...... +++..+|.+++..+..+.--+++..|.
T Consensus 119 li~GR~i~Gl~~gl~~~~~pmyl~E~sP~----------~~RG~~g~~~----~~~~~~g~ll~~~~~l~~ilGt~~~W~ 184 (485)
T KOG0569|consen 119 LILGRLIVGLACGLSTGLVPMYLTEISPK----------NLRGALGTLL----QIGVVIGILLGQVLGLPSLLGTEDLWP 184 (485)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhhcChh----------hhccHHHHHH----HHHHHHHHHHHHHHccHHhcCCCcchH
Confidence 46899999999999999999999999995 5898644433 555555555554332221112344687
Q ss_pred hhHHHHHHHHHHHHHHHHHccCCcc------ccccch----------h--hhchhhhhH-HHH------HHHHHHHhhcc
Q 020441 81 LLFIVFLGVITLGTILMCFLRKEED------KGEKET----------A--DASVNFYSY-LVS------LSKSITTLLAD 135 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~l~~~~~------~~~~~~----------~--~~~~~~~~~-~~~------~~k~~~~~~~~ 135 (326)
..+..-.+.+.+...+..++|+.++ .++++. + +++.++... .++ .--+..++++|
T Consensus 185 ~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~ 264 (485)
T KOG0569|consen 185 YLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKN 264 (485)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcC
Confidence 6665555555555566667765432 010000 0 000000000 000 00124456666
Q ss_pred hhhHHHHHHHHHHHHHHHHHH----hhcccc-cccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHH
Q 020441 136 VRMLLIIPLFAYSGLQQAFVW----AEFTKE-IVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI 210 (326)
Q Consensus 136 ~~~lll~p~~~~~g~~~~f~~----~~~~~~-~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i 210 (326)
++...-....+.....+-|-. ..|... +.+-.+..+..-++....|+...+...+...+.||.||| ++++.+..
T Consensus 265 ~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-pLll~~~~ 343 (485)
T KOG0569|consen 265 PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-PLLLISLS 343 (485)
T ss_pred cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-HHHHHHHH
Confidence 554432222222211111110 111111 111122234567888888999999999999999999999 57776665
Q ss_pred HHHHHHHHHH--hcccCCC-CCcchHHHHHHHHHHhhhhHHhh-hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHH
Q 020441 211 AQVVVFLWIL--INYSVTS-GVLGTLYPLIMAALLGIGDGVLN-TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFF 285 (326)
Q Consensus 211 ~~~~~~~~~~--l~~~~~~-~~~~~~~~~~~~~l~G~~d~~~~-~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~ 285 (326)
+...+.+++. +...... +|.. +..++..+++.+..++-- +..+-+.+|++|.+ |..+++.-...+-+...+.-+
T Consensus 344 ~~~~~~~~~~~~~~l~~~~~~~~~-y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~ 422 (485)
T KOG0569|consen 344 LMAVALLLMSIALFLSNSFGSWLS-YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGF 422 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHH
Confidence 4443322111 1111111 1100 122344455555555543 45566778889865 666777666666666555555
Q ss_pred Hhhhh
Q 020441 286 IGPYI 290 (326)
Q Consensus 286 i~~~~ 290 (326)
..+.+
T Consensus 423 ~fp~l 427 (485)
T KOG0569|consen 423 AFPPL 427 (485)
T ss_pred HHHHH
Confidence 44444
No 74
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.47 E-value=1.9e-11 Score=117.41 Aligned_cols=271 Identities=11% Similarity=0.052 Sum_probs=151.4
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL 82 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~ 82 (326)
.+++++|+|.|...+...+.+.|.-|++ +++|++.+++++...++|..+|+.++-.+... .|||..
T Consensus 110 ~~~~l~~ig~g~~~~~~~~li~~~~p~~--------~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~------~gw~~~ 175 (489)
T PRK10207 110 IALGTIAVGNGLFKANPASLLSKCYPPK--------DPRLDGAFTLFYMSINIGSLISLSLAPVIADK------FGYSVT 175 (489)
T ss_pred HHHHHHHhccccccCCHHHHHHHhcCCC--------chhhhcchhHHHHHHHHHHHHHHHHHHHHHHh------hChHHH
Confidence 5799999999999998888888877642 23668889999999999999999888776432 368887
Q ss_pred HHHHHHHHHHHHHHHHHccCCcccc---ccch-hhhch------------------hhhhHH-----------------H
Q 020441 83 FIVFLGVITLGTILMCFLRKEEDKG---EKET-ADASV------------------NFYSYL-----------------V 123 (326)
Q Consensus 83 f~~~~~i~~l~~~l~~~l~~~~~~~---~~~~-~~~~~------------------~~~~~~-----------------~ 123 (326)
|.+..+...++.+...+.++..++. ++++ .+... .+.... .
T Consensus 176 F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~ 255 (489)
T PRK10207 176 YNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFR 255 (489)
T ss_pred HHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 8664322222333333444221111 1000 00000 000000 0
Q ss_pred HHHHHHHHhhcchhhHHHHHHH-----HHHHHHHH-HHHhhccc-ccccccccch-hhHHHHHHHHHHHHHHHhhhhhhc
Q 020441 124 SLSKSITTLLADVRMLLIIPLF-----AYSGLQQA-FVWAEFTK-EIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLT 195 (326)
Q Consensus 124 ~~~k~~~~~~~~~~~lll~p~~-----~~~g~~~~-f~~~~~~~-~~~~~~lg~~-~~~~~~~~~gi~~~i~~~~~G~l~ 195 (326)
++.+ .-+++++| .+...+++ ++..+.+. +....+.+ .......|.. .......+..+..++.+|+.|++.
T Consensus 256 ~~~~-~~~~~r~r-~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~ 333 (489)
T PRK10207 256 EAFK-LDKTGRNK-MFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIY 333 (489)
T ss_pred HHhc-CCHHHHHH-HHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHH
Confidence 1111 01223332 22222222 11112222 11122222 1111122332 223344556677778899999999
Q ss_pred cCCCChhh------HHHHHHHHHHHHHHHHH---hcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-
Q 020441 196 TGLPSITF------IVSGGAIAQVVVFLWIL---INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT- 265 (326)
Q Consensus 196 d~~g~~~~------i~~~g~i~~~~~~~~~~---l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~- 265 (326)
||.++|+. .+..|.++....+.... ...........++.....+++.|++.....+..++...+..|++.
T Consensus 334 ~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~ 413 (489)
T PRK10207 334 THLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLM 413 (489)
T ss_pred HHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHH
Confidence 98876631 24456555444432110 011111111123455677889999999999999999999999874
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhh
Q 020441 266 EGAFAQLKVWQCASIAVVFFIGPY 289 (326)
Q Consensus 266 ~~~fa~~~~~~~~g~~i~~~i~~~ 289 (326)
..+.+++.+.+++|+.++-.++..
T Consensus 414 g~~~g~~~l~~~ig~~lg~~l~~~ 437 (489)
T PRK10207 414 GFILGMWFLTQAAAFLLGGYVATF 437 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667889999999999888877743
No 75
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.47 E-value=1.1e-11 Score=116.63 Aligned_cols=259 Identities=10% Similarity=0.003 Sum_probs=154.3
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCC--------
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG-------- 73 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~-------- 73 (326)
+.+|++.|+|.|..+++...++.+..+ ++++++..++.....++|..+|.++...+.....+
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~ 167 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYILVMGP----------ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLD 167 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHHHHCC----------HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhh
Confidence 467899999999999999999988887 45788889999999999999999998766532110
Q ss_pred ------------CCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHH-
Q 020441 74 ------------GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL- 140 (326)
Q Consensus 74 ------------~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ll- 140 (326)
.+..+||.+|.+..++.++..++..+.+.|+.+++++ + +.+.++..+ +++++|+..+
T Consensus 168 ~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~--~-----~~~~~~~~~---~~~~~~~~~~~ 237 (410)
T TIGR00885 168 KLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDA--K-----QISFSASLS---RLARIRHYREG 237 (410)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccc--c-----cccchhhHH---HHHhChhHHHH
Confidence 0123589888765544443333333333332221111 1 011122222 2456666554
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccc-ccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH
Q 020441 141 IIPLFAYSGLQQAFVWAEFTKEIVTPA-LGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL 217 (326)
Q Consensus 141 l~p~~~~~g~~~~f~~~~~~~~~~~~~-lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~ 217 (326)
....++|.|.+.+.+ +.+. .|..+. .+.+ ........+.....+|.+++|.+.||+++|+ ++....+......+
T Consensus 238 ~l~~f~yvg~e~~~~-s~l~-~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~-~l~i~~~~~~~~~l 314 (410)
T TIGR00885 238 VIAQFFYVGVQIMCW-TFII-QYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHK-VLMAYAIIGMALCL 314 (410)
T ss_pred HHHHHHHHHHHHHHH-HHHH-HHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHH
Confidence 444677888776554 2222 232221 1221 2222344444667889999999999998875 54444444333322
Q ss_pred HHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhhH
Q 020441 218 WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISL 292 (326)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~~ 292 (326)
+. ...++ .....+.++.|++.+...+.++++..+..+++...+-+..-.. .+|+++.+.+...+.-
T Consensus 315 l~--~~~~~------~~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~-~~Gga~~p~l~G~~~d 380 (410)
T TIGR00885 315 GS--IFAGG------HVGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA-IIGGGIVPPLQGFIID 380 (410)
T ss_pred HH--HHcCC------hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH-HhccchHHHHHHHHHH
Confidence 21 22222 2235556667777777779999999888887654333322222 3888888887766653
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.44 E-value=1.7e-11 Score=115.54 Aligned_cols=118 Identities=8% Similarity=-0.020 Sum_probs=86.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
.+..+..+.+..+.++++.++.|++.||+|+|+ ++..+.++....+..... ..++.. .....++..++.|++.+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~-~l~~~~~~~~v~~~l~~~-~~~~~~--~~~~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKK-VMLLSLVAWALRFGFFAY-GDPEYF--GYALLFLSMIVYGCAFDFF 325 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHH-cCcchh--hHHHHHHHHHHHHHHHHHH
Confidence 356788889999999999999999999999995 666666655544322111 111110 0133455678889999988
Q ss_pred hhhhHhhHHhhccCC-chhhhhHHH-HHHHHHHHHHHHHhhhhh
Q 020441 250 NTQLSALLGILFKHD-TEGAFAQLK-VWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 250 ~~~~~~il~~~f~~~-~~~~fa~~~-~~~~~g~~i~~~i~~~~~ 291 (326)
++....++.+.+|++ +..+++.++ ..+++|..+++.++..+.
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~ 369 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMV 369 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 888889999999976 577899886 678899999998887663
No 77
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.43 E-value=1.8e-11 Score=115.96 Aligned_cols=283 Identities=14% Similarity=0.072 Sum_probs=172.1
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++..|++||++.|..+++.+....+.+| +++|+++.++..+..|+|.+++..++-.+-.. ..||+
T Consensus 131 ~~~~R~lqGl~~g~~~pa~~~i~~~W~P----------~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s-----~~GW~ 195 (466)
T KOG2532|consen 131 LLVLRFLQGLGQGVLFPAIGSILAKWAP----------PNERSTFIAILTAGSQLGTIITMPVSGLLCES-----SLGWP 195 (466)
T ss_pred hHHHHHHhHHHHhHHHhhhhceeeeECC----------HHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc-----CCCCc
Confidence 3678999999999999999999999999 46899999999999999999999887766543 36899
Q ss_pred hhHHHHHHHHHHHHHHHHHc--cCCccccc---cchh-------hhchh--hhhHHHHHHHHHHHhhcchhhHHHHHHHH
Q 020441 81 LLFIVFLGVITLGTILMCFL--RKEEDKGE---KETA-------DASVN--FYSYLVSLSKSITTLLADVRMLLIIPLFA 146 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~l--~~~~~~~~---~~~~-------~~~~~--~~~~~~~~~k~~~~~~~~~~~lll~p~~~ 146 (326)
..|.++.+++++-.++.+++ ++|.+.+. +|.+ +++.+ ++.|+++ +++++....... .-
T Consensus 196 sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~El~~I~~~k~~~~~~~~~~vP~~~-------i~ts~~vwai~~-~~ 267 (466)
T KOG2532|consen 196 SIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKELKYIEKGKSEAHVKKKPPVPYKA-------ILTSPPVWAIWI-SA 267 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHhcccccccCCCCCCCHHH-------HHcCHHHHHHHH-HH
Confidence 99998877776655554333 33433221 1100 00111 2345654 566777655442 23
Q ss_pred HHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCCh-------hhHHH-HHHHHHHHHH
Q 020441 147 YSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSI-------TFIVS-GGAIAQVVVF 216 (326)
Q Consensus 147 ~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~-------~~i~~-~g~i~~~~~~ 216 (326)
+.+....+..-.|.++|..+.+|.+ ..|+...+--+...+..++.|.++||..+| +.++- ++.....+.
T Consensus 268 f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~- 346 (466)
T KOG2532|consen 268 FGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVF- 346 (466)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHH-
Confidence 3333333333455667888887764 889999898999999999999999976542 11221 111222222
Q ss_pred HHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhh-ccCCchhhhhHHHHHHHHHHHHHHHHhhhhhH---
Q 020441 217 LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FKHDTEGAFAQLKVWQCASIAVVFFIGPYISL--- 292 (326)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~-f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~~--- 292 (326)
+..+.+.++.+ ....+....++++-.+.+..-....... .|.......++.++.-++...+++.+...+..
T Consensus 347 -l~~l~~~~~~~----~~~a~~~l~~~~~~~g~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t 421 (466)
T KOG2532|consen 347 -LLVLAFTSDEH----RLLAVILLTIAIGLSGFNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNT 421 (466)
T ss_pred -HHeeeecCCCc----chHHHHHHHHHHHHcccchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCC
Confidence 22234444321 1112222222333333333333444444 55555557888899999999888888876641
Q ss_pred --HH--HHHHHHHHHHHHHHHHHH
Q 020441 293 --QA--MLIVMVVGICVALVGILF 312 (326)
Q Consensus 293 --~~--~~~~~~~~~~~~~~~~~~ 312 (326)
.+ ..++..++++++-+.|..
T Consensus 422 ~~eW~~VF~i~a~i~~~~~i~f~~ 445 (466)
T KOG2532|consen 422 REEWRIVFLIAAGILIVGNIIFLF 445 (466)
T ss_pred HHHHHHHHHHHHHHHHHhchheeE
Confidence 22 223444445555544443
No 78
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.41 E-value=4.1e-11 Score=112.00 Aligned_cols=230 Identities=10% Similarity=0.054 Sum_probs=128.0
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhh-hchhhhhH
Q 020441 43 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETAD-ASVNFYSY 121 (326)
Q Consensus 43 g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~-~~~~~~~~ 121 (326)
++.+|......++|..+|+.++..+.. .+||.+|.+...++.+..++.++.+++++++++.+++ ++++++
T Consensus 132 ~~~~g~~~~~~~~g~~~g~~~~g~l~~-------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 202 (396)
T TIGR00882 132 NFEYGKARMFGCVGWALCASIAGILFS-------IDPQIVFWLGSGFALILMLLLMFAKPKAPSSATVANALGANASA-- 202 (396)
T ss_pred ccccchhhhhcccHHHHHHHHHhhhhc-------cCchHHHHHHHHHHHHHHHHHHHhCCCCchhhhhhcccccccCC--
Confidence 455566666668888888888765432 3588788766555555554444433222111110000 000111
Q ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHH-HHH--HHhhccccccc-ccccchhhHHHHHHHHHHHHHHHhhhhhhccC
Q 020441 122 LVSLSKSITTLLADVRMLLIIPLFAYSGLQ-QAF--VWAEFTKEIVT-PALGVSGVGGAMAVYGAFDAICSLAAGRLTTG 197 (326)
Q Consensus 122 ~~~~~k~~~~~~~~~~~lll~p~~~~~g~~-~~f--~~~~~~~~~~~-~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~ 197 (326)
++.++..+.++||+.+.+.+..+..... ..+ +...|.+.+.. ...+.+..+....+.++.+.++.+..|++.||
T Consensus 203 --~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r 280 (396)
T TIGR00882 203 --FSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINR 280 (396)
T ss_pred --CCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1123344577888765443322211111 001 11222222211 12233456777888888899999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhH-HHHH
Q 020441 198 LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQ-LKVW 275 (326)
Q Consensus 198 ~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~-~~~~ 275 (326)
+++|+ .+..+.++....+.. ....++ ++..++..++.|++....+........+..|++. .++++. ++..
T Consensus 281 ~g~~~-~l~~~~~l~~l~~~~--~~~~~~-----~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~ 352 (396)
T TIGR00882 281 IGAKN-ALLIAGTIMSVRIIG--SSFATT-----ALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFA 352 (396)
T ss_pred hccch-hHHHHHHHHHHHHHH--HHhcCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHH
Confidence 99986 555555544433322 122333 2445666777888877666655666666677663 445664 7888
Q ss_pred HHHHHHHHHHHhhhhh
Q 020441 276 QCASIAVVFFIGPYIS 291 (326)
Q Consensus 276 ~~~g~~i~~~i~~~~~ 291 (326)
..+|+.+++.+...+.
T Consensus 353 ~~lg~~~~~~l~G~l~ 368 (396)
T TIGR00882 353 KQLAMIFLSTLAGNMY 368 (396)
T ss_pred HHHHHHHHHHhHHHHH
Confidence 8999888887776663
No 79
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.40 E-value=6.3e-10 Score=106.09 Aligned_cols=272 Identities=17% Similarity=0.161 Sum_probs=160.9
Q ss_pred hhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCC--CCCchhhHHHHHHH-HHHHHHHHHHccCCccccccchhhhchhh
Q 020441 42 IGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGS--TSGTTLLFIVFLGV-ITLGTILMCFLRKEEDKGEKETADASVNF 118 (326)
Q Consensus 42 ~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~--~~~~~~~f~~~~~i-~~l~~~l~~~l~~~~~~~~~~~~~~~~~~ 118 (326)
|++-+|.=|+.-.+|.++--++...+....++.. .+..|..+.+..+. .+.+.+.++++|+++..++.+ +.+..-
T Consensus 186 ~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~--~~~~~~ 263 (477)
T PF11700_consen 186 RGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLP--SGSSYL 263 (477)
T ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--cchhHH
Confidence 4888888888888888777777666544332221 12345444332211 234556677787664421111 001112
Q ss_pred hhHHHHHHHHHHHh-hcchhhHHH-HHHHHHH-HHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhh
Q 020441 119 YSYLVSLSKSITTL-LADVRMLLI-IPLFAYS-GLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGR 193 (326)
Q Consensus 119 ~~~~~~~~k~~~~~-~~~~~~lll-~p~~~~~-g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~ 193 (326)
+.++++. ++++|. .++|+.... +-.++|. |....... ...|.+..+|.+ +...+.++..++.++|+.++|+
T Consensus 264 ~~g~~~l-~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~---~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~ 339 (477)
T PF11700_consen 264 RFGFKRL-WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISF---AGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGW 339 (477)
T ss_pred HHHHHHH-HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344443 333333 344544332 2223333 33322221 112444556765 5566678888899999999999
Q ss_pred hccCCCCh--hhHHHHHHHHHHHHHHHHHhcccCCC-CCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhh
Q 020441 194 LTTGLPSI--TFIVSGGAIAQVVVFLWILINYSVTS-GVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAF 269 (326)
Q Consensus 194 l~d~~g~~--~~i~~~g~i~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~f 269 (326)
+.||+|.| + .+....++..+..+..++-..++. .....+..++..+++|+..+..|+.--++++++.|+++ .+-|
T Consensus 340 l~~r~g~k~~~-~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efF 418 (477)
T PF11700_consen 340 LQDRFGPKTKR-TLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFF 418 (477)
T ss_pred HHHHhCCchhH-HHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHH
Confidence 99999987 4 333333333222122222111110 11123668899999999999999999999999999876 4579
Q ss_pred hHHHHHHHHHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 020441 270 AQLKVWQCASIAVVFFIGPYIS-----LQAMLIVMVVGICVALVGILFLTIQVEKA 320 (326)
Q Consensus 270 a~~~~~~~~g~~i~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (326)
+.|.+..=..+.+++++...+. ...-...+.++++++.+.+..++....||
T Consensus 419 gly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 419 GLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 9999999999999999887664 33445666777788888877665444433
No 80
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.39 E-value=6.1e-11 Score=109.08 Aligned_cols=251 Identities=13% Similarity=0.097 Sum_probs=138.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|+++|++.+..++....++.+..+ ++|++..|+......++..+|+.+...+.... .++||.
T Consensus 91 ~~~~~~~g~g~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~----~~~w~~ 155 (355)
T TIGR00896 91 FAGTALIGVGIAIINVLLPSLIKRDFP-----------QRVGLMTGLYSMALMGGAALAAAATVPLAQHS----GGHWQQ 155 (355)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHhCc-----------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hhhHHH
Confidence 467899999999888766555544443 47899999998888888888887765553221 124887
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHH-HHHHHHHHHhhcc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAY-SGLQQAFVWAEFT 160 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~-~g~~~~f~~~~~~ 160 (326)
.|....++.++.. ..++++.+++++++ ++ .++.+. .+.++||+...+...... .....++ ..+.
T Consensus 156 ~f~~~~~~~~~~~--~~~~~~~~~~~~~~---~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l 220 (355)
T TIGR00896 156 ALAWWALPALLAL--LAWIPQVRRRVAAN---QT-TTRLTP-------VRIWRSPLAWQVTVFFGLQSGLYYSL--IGWL 220 (355)
T ss_pred HHHHHHHHHHHHH--HHHhhhhccccCCC---CC-CCCCCC-------chhhcCHhHHHHHHHHHHHHHHHHHH--HHHH
Confidence 7765443332222 23333221111111 00 011111 124566665443222111 1111111 1122
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
+.+.++ .|. ++.+......+++.++++++.|++.||+++|+..+..+.++.....+.. .+.++. .. ...
T Consensus 221 p~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~-~~~ 291 (355)
T TIGR00896 221 PAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGL--LFAPMH-----GL-WAW 291 (355)
T ss_pred HHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHH--HHhhhh-----HH-HHH
Confidence 223322 343 4678888899999999999999999999543235444444444333221 122221 11 123
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC-c-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD-T-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~-~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+++|++.+...+...+...+..+++ + ...++..+....++..+++.+...+.
T Consensus 292 ~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~ 346 (355)
T TIGR00896 292 ALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLH 346 (355)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56778888888777777766665543 2 34556666666666677776665543
No 81
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.39 E-value=1.2e-10 Score=112.15 Aligned_cols=255 Identities=15% Similarity=0.116 Sum_probs=159.2
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+...++.|++.+..+++..+++-+..|+ ++..+..++.-..++.+.++|+.++-.+.... |...
T Consensus 107 l~~~fl~g~~~a~~~PA~~A~ip~lV~~----------~~L~~A~al~s~~~niar~iGPalgG~Lva~~------G~~~ 170 (524)
T PF05977_consen 107 LILTFLLGIGSAFFNPAWQAIIPELVPK----------EDLPAANALNSISFNIARIIGPALGGILVAFF------GAAA 170 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH----------hhHHHHHHHHHHHHHHHHhccchHHHHHHHHH------HHHH
Confidence 4567899999999999999999999985 47788888888888999999988886654321 2223
Q ss_pred hHHHHHHHHHHHHHH-HHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhc-chhhHHHHHHHHHHHHHHHHHHhhc
Q 020441 82 LFIVFLGVITLGTIL-MCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLA-DVRMLLIIPLFAYSGLQQAFVWAEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~lll~p~~~~~g~~~~f~~~~~ 159 (326)
.|.+-. ++.+..+. ...++++.++++. +++++.+.+++-++..+ +|.+...+......++..+-++..+
T Consensus 171 ~f~ina-lsfl~~i~~l~~~~~~~~~~~~--------~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLl 241 (524)
T PF05977_consen 171 AFLINA-LSFLISILALLRWKPPPPPSSL--------PRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALL 241 (524)
T ss_pred HHHHHH-HHHHHHHHHHHHcccccccccc--------chhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhh
Confidence 344332 22222222 2233322211111 11233444455555554 4544433322223333322233333
Q ss_pred ccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 160 TKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 160 ~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
+ .+..+.+|. ...|+.+.++|++.++|+.+.+++.+|+++++ ++..+.+......+. +...++ .+...+
T Consensus 242 P-l~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~-lv~~~~~~~a~~~~~--lal~~~-----~~~~~~ 312 (524)
T PF05977_consen 242 P-LFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRR-LVLLASLLFALALLL--LALSPS-----FWLALI 312 (524)
T ss_pred h-HHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch-hhHHHHHHHHHHHHH--HhcchH-----HHHHHH
Confidence 2 344455554 37789999999999999999999998888764 655565554443322 234343 255667
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
..++.|++....++..++.+.+..|++ +.-++|+|+.....+..++.++...+
T Consensus 313 ~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~l 366 (524)
T PF05977_consen 313 ALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFL 366 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999999987 46677777766665555555555444
No 82
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.39 E-value=1.3e-12 Score=117.51 Aligned_cols=258 Identities=17% Similarity=0.139 Sum_probs=158.8
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
|+.+|.+||+|.+..|++.-+.+.+.-|+ |++||+..|+-.++..+|.++|+.++-++... -|.+
T Consensus 162 l~vAR~LQgvgsA~~~tsglamlAd~f~~---------d~er~~vmGialgfislG~lvgPpfGGilYe~------~Gk~ 226 (464)
T KOG3764|consen 162 LFVARSLQGVGSAFADTSGLAMLADVFPE---------DNERGSVMGIALGFISLGVLVGPPFGGILYEF------AGKS 226 (464)
T ss_pred HHHHHHHhhhhHHHHHhhhHHHHHHHccc---------chhhhHHHHHHHHHHhccceecCCcccchHhh------cCCc
Confidence 46899999999999999988888777664 46789999999999999999999998766442 2456
Q ss_pred hhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcc
Q 020441 81 LLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFT 160 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~ 160 (326)
.+|+++.++.++...+-+++-+|.++.+++ + .+..+ +++++++|+..+..-....++...+|.-..++
T Consensus 227 aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~-~----~~~~~-------~~~Ll~dP~I~~~agai~~~n~~lafLePtls 294 (464)
T KOG3764|consen 227 APFLVLAIVLLLDGALQLLVIEPTEMDPDS-T----EQGTP-------MWSLLMDPYILLIAGAITFSNSSLAFLEPTLS 294 (464)
T ss_pred CcHHHHHHHHHHHHHHHHheeCccccCccc-c----ccCcc-------HHHHHhCchHhhhhcchhhccchHHHhCcccH
Confidence 889998888888887777765554433221 1 11223 34478899998877777778887887644332
Q ss_pred cccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHH-HHHHHHHHHHHHHHHhcccCCCCCcchHH-HH
Q 020441 161 KEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIV-SGGAIAQVVVFLWILINYSVTSGVLGTLY-PL 236 (326)
Q Consensus 161 ~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~-~~g~i~~~~~~~~~~l~~~~~~~~~~~~~-~~ 236 (326)
. +..+...- -.+|.+.+-..+...++..++|++.||++..+... ..+.+......... .+..+ +.+.+. -.
T Consensus 295 l-wm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~i--P~~~~--~~~L~vp~~ 369 (464)
T KOG3764|consen 295 L-WMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPI--PFATS--IAQLWVPNF 369 (464)
T ss_pred H-HHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchh--Hhhhh--HHHHhhhhH
Confidence 1 22222221 14555566677788999999999999998432222 22222211111111 11111 000111 23
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccC--Cc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKH--DT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~--~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+.+..+..|+..-+...-++-..-.+ +. ...+++.+..-++|.++++.++..+
T Consensus 370 ~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~i 426 (464)
T KOG3764|consen 370 GLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSL 426 (464)
T ss_pred HHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchh
Confidence 445555666766666555544322111 01 2245566666677777777777655
No 83
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.34 E-value=1.6e-11 Score=116.74 Aligned_cols=186 Identities=17% Similarity=0.118 Sum_probs=118.3
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..|+++|+..|..|++...|+...=.+ ++||+-+|++++..++|+++|+++++.+.+.+......|||.
T Consensus 138 ialr~llGl~es~~wP~~~~~lg~wy~~----------~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~ 207 (495)
T KOG2533|consen 138 IALRFLLGLFESGGWPGVVAILGNWYGK----------SERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRW 207 (495)
T ss_pred HHHHHHHHHHhcccchHHHHHHHhhcCh----------hhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCcee
Confidence 4569999999999999998888877774 589999999999999999999999999866443334568998
Q ss_pred hHHHHHHHHHHHH-HHHHHccCCcc-c--cccch-----hhhchhhhhH--HHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 020441 82 LFIVFLGVITLGT-ILMCFLRKEED-K--GEKET-----ADASVNFYSY--LVSLSKSITTLLADVRMLLIIPLFAYSGL 150 (326)
Q Consensus 82 ~f~~~~~i~~l~~-~l~~~l~~~~~-~--~~~~~-----~~~~~~~~~~--~~~~~k~~~~~~~~~~~lll~p~~~~~g~ 150 (326)
.|++=.+++++.. +.++++|+.+. . .++++ .+.+..++.+ -+...++..+.++||+........+....
T Consensus 208 ~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~l 287 (495)
T KOG2533|consen 208 LFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKL 287 (495)
T ss_pred ehhHHHHHHHHHHheEEEEecCChhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhh
Confidence 8987766665544 33556764322 1 11111 0000000000 00123556668889998776644333332
Q ss_pred HHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCC
Q 020441 151 QQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGL 198 (326)
Q Consensus 151 ~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~ 198 (326)
... -...+.+.+.+...|.+ +.....+.+.++.+++.++.|.++||.
T Consensus 288 v~~-~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~ 336 (495)
T KOG2533|consen 288 VNY-GFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRL 336 (495)
T ss_pred ccc-cHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHH
Confidence 211 11222222333322232 555667788888999999999999994
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.33 E-value=8.7e-10 Score=105.63 Aligned_cols=305 Identities=9% Similarity=0.021 Sum_probs=163.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.++++.|+|.|..+++..+++.+..+++ ++++|++.+++++...++|..+|..+...+... .+|+.
T Consensus 106 ~~~~~l~g~g~g~~~~~~~~~~a~~~~~~-------~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~------~g~~~ 172 (475)
T TIGR00924 106 FYGLGTIAVGSGLFKANPSSMVGKLYERG-------DMPRRDGGFTLFYMSINIGSFISPLLAGVIAEN------YGYHV 172 (475)
T ss_pred HHHHHHHHhccccccCCHHHHHHHhcCCC-------CcccccceehhHHHHHHHHHHHHHHHHHHHHHh------cChHH
Confidence 35788999999999988888877776632 013688899999999999999999998766432 35887
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccc-c----chhhhchhhh-hH------------H------H--------------
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGE-K----ETADASVNFY-SY------------L------V-------------- 123 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~-~----~~~~~~~~~~-~~------------~------~-------------- 123 (326)
.|.+..+..+++.+...+.++..++.+ + ++++++..+. .. + .
T Consensus 173 ~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (475)
T TIGR00924 173 GFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVII 252 (475)
T ss_pred HHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 777655444455555555443221111 0 0000000000 00 0 0
Q ss_pred ---HHHHH-HHHhhcchhhHHHHHHHHHHHHH-HHH----H-Hhhcccccccccc-cch-hhHHHHHHHHHHHHHHHhhh
Q 020441 124 ---SLSKS-ITTLLADVRMLLIIPLFAYSGLQ-QAF----V-WAEFTKEIVTPAL-GVS-GVGGAMAVYGAFDAICSLAA 191 (326)
Q Consensus 124 ---~~~k~-~~~~~~~~~~lll~p~~~~~g~~-~~f----~-~~~~~~~~~~~~l-g~~-~~~~~~~~~gi~~~i~~~~~ 191 (326)
+..++ ..+....+|...+.|+++..-.. ..| . ...+.+......+ +.+ ..++...+.++..++.+++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~ 332 (475)
T TIGR00924 253 FFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVL 332 (475)
T ss_pred HHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHH
Confidence 00000 00000112322233333222111 111 0 1111111111111 111 25667778888888888875
Q ss_pred h----hhccC-CCChhhH-HHHHHHHHHHHHHHHHh--cccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC
Q 020441 192 G----RLTTG-LPSITFI-VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 263 (326)
Q Consensus 192 G----~l~d~-~g~~~~i-~~~g~i~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~ 263 (326)
. ++.|| ++.+... +..|.++...++....+ ...++....+++...+..+++++++....+..+++..+..|+
T Consensus 333 ~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~ 412 (475)
T TIGR00924 333 AMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQ 412 (475)
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCH
Confidence 5 45554 2222111 35566665544432211 111111011246677788999999999999999999999998
Q ss_pred C-chhhhhHHHHHHHHHHHHHHHHhhhhhH---HH-HHHHHHHHHHHHHHHHHHHHHHHhh
Q 020441 264 D-TEGAFAQLKVWQCASIAVVFFIGPYISL---QA-MLIVMVVGICVALVGILFLTIQVEK 319 (326)
Q Consensus 264 ~-~~~~fa~~~~~~~~g~~i~~~i~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (326)
+ +...++.+.+..++|..++..+.+.... .. ....+...+++..+.+..+.++.+|
T Consensus 413 ~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 473 (475)
T TIGR00924 413 RLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMVPWLNR 473 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7 5778889999999999998777764421 11 1222233333444444455555554
No 85
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.32 E-value=1.2e-09 Score=101.95 Aligned_cols=229 Identities=10% Similarity=0.017 Sum_probs=125.8
Q ss_pred cchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhh
Q 020441 40 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFY 119 (326)
Q Consensus 40 ~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~ 119 (326)
++++.+.+.......+|.++|+.....+.. ..+||..|.+..++..+..+..+++++++++++++ ++.+.
T Consensus 129 ~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~------~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~~----~~~~~ 198 (390)
T TIGR02718 129 RTLAKGNAVQIAGVMIGFFGGGAGTLVLFG------KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPEA----PLARR 198 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH------HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCcccc----chhhH
Confidence 344555565666556677777755544433 24699888877766665555555554432221110 00011
Q ss_pred hHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccc-cccchhhHHHHHHHHHHH-HHHHhhhhhhccC
Q 020441 120 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP-ALGVSGVGGAMAVYGAFD-AICSLAAGRLTTG 197 (326)
Q Consensus 120 ~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~-~lg~~~~~~~~~~~gi~~-~i~~~~~G~l~d~ 197 (326)
++..+.+++|+........+..........+..+ .+..+ ..+.++++....+.++.+ .++..+.|++.||
T Consensus 199 -------~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r 270 (390)
T TIGR02718 199 -------ASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSK-LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRR 270 (390)
T ss_pred -------HHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhh-HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 2233466777654433333222222222222222 23222 223347788777777544 4568899999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHH-h-c-ccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC-C-chhhhhHH
Q 020441 198 LPSITFIVSGGAIAQVVVFLWIL-I-N-YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH-D-TEGAFAQL 272 (326)
Q Consensus 198 ~g~~~~i~~~g~i~~~~~~~~~~-l-~-~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~-~-~~~~fa~~ 272 (326)
+++++ .+..+..+........+ . . +.... +...+...++.+++.+...+..++...+..++ + +.+.++.+
T Consensus 271 ~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 345 (390)
T TIGR02718 271 AGLWR-TFILGVGLAGSLALLWFAQAAFWLAPG----IAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAV 345 (390)
T ss_pred hhHHH-HHHHHHHHHHHHHHHHHHHHHcccCCc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHH
Confidence 99885 55545444321111111 1 1 11111 12333434455666777777777776676654 4 46688999
Q ss_pred HHHHHHHHHHHHHHhhhhh
Q 020441 273 KVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 273 ~~~~~~g~~i~~~i~~~~~ 291 (326)
+..+++|..+++.++..+.
T Consensus 346 ~~~~~lg~~~g~~~~G~l~ 364 (390)
T TIGR02718 346 QSTRDLGELIASSIAGYLT 364 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887664
No 86
>PRK09669 putative symporter YagG; Provisional
Probab=99.30 E-value=5.9e-10 Score=105.91 Aligned_cols=233 Identities=12% Similarity=-0.020 Sum_probs=125.1
Q ss_pred CcchhhhhHHHHHHHHHhHHHHHHHHHHHhc-CCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchh
Q 020441 39 GTVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 117 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~iiG~li~~~~~~-~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 117 (326)
+++|++..++.....+.|..+++.+...+.. ..+.....+|+..+.++.+++.+..++.++..+ ++.++++ +
T Consensus 141 ~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~-e~~~~~~--~---- 213 (444)
T PRK09669 141 PRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTK-ERYTPEV--D---- 213 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeE-EecCCCC--c----
Confidence 3568888888888778887777765432221 111112356777666655555444443333211 1111111 0
Q ss_pred hhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccch-hhHHHHHHHHHHHHHHHhhhhhhcc
Q 020441 118 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGRLTT 196 (326)
Q Consensus 118 ~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~-~~~~~~~~~gi~~~i~~~~~G~l~d 196 (326)
++.+.++.++ ++++||..+.+....+..........+ +..-+.+..++.. ..+..+....+..+++.++.+++.|
T Consensus 214 ~~~~~~~~~~---~~~~n~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~ 289 (444)
T PRK09669 214 NSSSVWKDLK---LLLGNSQWRIMFIFNVVLLTAVVTRGG-ATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLG 289 (444)
T ss_pred CCCCHHHHHH---HHhCCchHHHHHHHHHHHHHHHHHHhh-hhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122333333 356787766544333322222211111 1111122223322 2334445555677788889999999
Q ss_pred CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC------Cc-h-hh
Q 020441 197 GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH------DT-E-GA 268 (326)
Q Consensus 197 ~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~------~~-~-~~ 268 (326)
|+|+|+ .+..+.+.........++ .++++ ++..++..+++|++.+..++...+++++..+. ++ + ..
T Consensus 290 r~gk~~-~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~ 363 (444)
T PRK09669 290 KFDRVR-AFKWTIVAFVILSALIFF-IPPSN----VWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLV 363 (444)
T ss_pred HhChHH-HHHHHHHHHHHHHHHHHH-hCcch----HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHH
Confidence 999885 555555443322221121 22322 34556667889999999999999999988752 11 2 24
Q ss_pred hhHHHHHHHHHHHHHHHHhh
Q 020441 269 FAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 269 fa~~~~~~~~g~~i~~~i~~ 288 (326)
++.+.+.+.+|.+++..+..
T Consensus 364 ~s~~~~~~klg~alg~~i~g 383 (444)
T PRK09669 364 FSTNLFAIKLGLAIGGAVVG 383 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 66777777777777666554
No 87
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.27 E-value=1.5e-10 Score=109.34 Aligned_cols=257 Identities=16% Similarity=0.087 Sum_probs=143.2
Q ss_pred hhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCC-CCchhhHHHH
Q 020441 8 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGST-SGTTLLFIVF 86 (326)
Q Consensus 8 ~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~-~~~~~~f~~~ 86 (326)
..++.....+...+...|..++ +++|.+..++-......|..+.+.+...+....++.+. .+|+....++
T Consensus 113 ~~~~~t~~~i~~~al~~~lt~~---------~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~ 183 (428)
T PF13347_consen 113 FDIAYTFVQIPYNALIPELTPD---------PDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVL 183 (428)
T ss_pred HHHhhhhccCchhhcCcccccc---------HhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHH
Confidence 3445555555555556665553 35777777765555555554333333333322111112 3677666655
Q ss_pred HHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccc
Q 020441 87 LGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP 166 (326)
Q Consensus 87 ~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~ 166 (326)
.++.++..++..+.-+.++++++ +++++.++++.+|+ +++||+.+.+.-..+..........+.+ .-+.+.
T Consensus 184 ~iv~~v~~~i~~~~~ke~~~~~~-----~~~~~~~~~~~~~~---~~~nr~~~~l~~~~~~~~~~~~~~~~~~-~y~~~~ 254 (428)
T PF13347_consen 184 AIVGLVFFLITFFFVKERSVEVT-----EQEKKISLRDSLRS---LFRNRPFRILLLAFFLQWLAFALMNTFL-PYYFTY 254 (428)
T ss_pred HHHHHHHhhhhhheeeecccccc-----ccccccccccchhh---hcccchHHHHHHHHHHHHhhhhhhhhHH-HHHHHH
Confidence 55555544444333221111111 11123345555444 5567776655444444333322221111 012222
Q ss_pred cccch-hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhh
Q 020441 167 ALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 245 (326)
Q Consensus 167 ~lg~~-~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~ 245 (326)
.+|.+ ..+....+..+...++.++++++.||+|+|+ .+..+.++.+...++..+...++ ++..++..++.|++
T Consensus 255 vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~-~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~l~gi~ 328 (428)
T PF13347_consen 255 VLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKKK-VYIIGLLLAALGFLLLFFLGPGS-----PWLVLILFILAGIG 328 (428)
T ss_pred HhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHcccee-ehhhhHHHHHHHHHHHHHHHhhh-----HHHHHHHHHHhHhh
Confidence 33333 4556667788888999999999999999996 77777766665544322222123 36678888999999
Q ss_pred hHHhhhhhHhhHHhhccCC------c-h-hhhhHHHHHHHHHHHHHHHHhh
Q 020441 246 DGVLNTQLSALLGILFKHD------T-E-GAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 246 d~~~~~~~~~il~~~f~~~------~-~-~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
.+..+....+++++..+.+ + + ..+|.+.+.+-++.+++..+..
T Consensus 329 ~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 329 YGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred hcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 9999999999999987632 2 2 2456777777777766666554
No 88
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.26 E-value=5.3e-09 Score=100.20 Aligned_cols=238 Identities=14% Similarity=0.075 Sum_probs=121.7
Q ss_pred CcchhhhhHHHHHHHHHhHHHHHHHHH-HHhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHH-ccCCccccccchhhhch
Q 020441 39 GTVIGSFNGEFWGMFASHQFVGNLITL-AVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCF-LRKEEDKGEKETADASV 116 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~iiG~li~~-~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~-l~~~~~~~~~~~~~~~~ 116 (326)
+++|.+.+++-+...+.+..++..+.. .+.......+..+++....++.++..+..++.++ .|++.++++++ .++
T Consensus 138 ~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~~~---~~~ 214 (473)
T PRK10429 138 KREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDNQV---SAE 214 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccccc---ccc
Confidence 467888788755555655444444332 2211111111234555444444333333333322 22221111100 011
Q ss_pred hhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccc-hhhHHHHHHHHHHHHHHHhhhhhhc
Q 020441 117 NFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-SGVGGAMAVYGAFDAICSLAAGRLT 195 (326)
Q Consensus 117 ~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~-~~~~~~~~~~gi~~~i~~~~~G~l~ 195 (326)
+++.+++|.++. +++||..+.++-..+..........+ +..-+.+..++. +..+..+.+.+++.+++.++.+++.
T Consensus 215 ~~~~~~~~~~~~---~~~n~~~~~ll~~~~~~~~~~~~~~~-~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~ 290 (473)
T PRK10429 215 GSHLTLKDIVAL---IYKNDQLSCLLGMALAYNIASNIING-FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLV 290 (473)
T ss_pred ccCCCHHHHHHH---HhcCHHHHHHHHHHHHHHHHHHHHhh-heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122345555443 44677665544332222222221111 111122223332 2455666777788899999999999
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHh-c-ccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC------Cc-h
Q 020441 196 TGLPSITFIVSGGAIAQVVVFLWILI-N-YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH------DT-E 266 (326)
Q Consensus 196 d~~g~~~~i~~~g~i~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~------~~-~ 266 (326)
||+|+|+ .+..+.++.++..+..+. . ..++. ++..++..++.|++.+..+....+++++..+. +| +
T Consensus 291 ~r~gkk~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~ 365 (473)
T PRK10429 291 KSLSRRI-LWAGASIFPVLSCGVLLLMGLAAPHN----ALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCE 365 (473)
T ss_pred HHcCcHH-HHHHHHHHHHHHHHHHHHHhccCchh----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccch
Confidence 9999985 655555443332222111 1 12221 34456667788999999999989999988542 22 2
Q ss_pred -hhhhHHHHHHHHHHHHHHHHhh
Q 020441 267 -GAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 267 -~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
..|+...+.+-+|.+++..+..
T Consensus 366 G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 366 SIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 2567777777777777665554
No 89
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.25 E-value=2.4e-10 Score=112.98 Aligned_cols=187 Identities=16% Similarity=0.119 Sum_probs=114.7
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCC--------
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG-------- 73 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~-------- 73 (326)
+.+|+++|+|.+..++...+|+.|+.+ +++|+++.|++.....+|..+|.+++..+.....+
T Consensus 176 ~~~r~l~GiG~~~~~~~~~~~i~d~~~----------~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~ 245 (633)
T TIGR00805 176 LVSQLLRGIGATPIFPLGISYIDDFAK----------SKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTED 245 (633)
T ss_pred HHHHHHHhccCCcchhcCchhhhccCC----------ccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCC
Confidence 579999999999999999999999999 46899999999999999999999888766532100
Q ss_pred --C----CCC--CchhhHHHHHHHHHHHHHHHHHccCCcccc----c-c-chhhh-c-------hhhhhHHHHHHHHHHH
Q 020441 74 --G----STS--GTTLLFIVFLGVITLGTILMCFLRKEEDKG----E-K-ETADA-S-------VNFYSYLVSLSKSITT 131 (326)
Q Consensus 74 --~----~~~--~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~----~-~-~~~~~-~-------~~~~~~~~~~~k~~~~ 131 (326)
. ..| .|+..|++..+++++..+..+++|+..+++ + + ++.+. + .......++..+...+
T Consensus 246 ~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (633)
T TIGR00805 246 VILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHETEKLEKSEDKSRKKNSDITKDFPKIIKR 325 (633)
T ss_pred CCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhhhcccccccccchhhhhhHHHHHHHHHH
Confidence 0 111 277778766655655555555555432211 0 0 00000 0 0000122344455666
Q ss_pred hhcchhhHHHHHHHHHH-HHHHHHHHhhcccccccccccch--hhHHHHHHHHH-HHHHHHhhhhhhccCCCC
Q 020441 132 LLADVRMLLIIPLFAYS-GLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGA-FDAICSLAAGRLTTGLPS 200 (326)
Q Consensus 132 ~~~~~~~lll~p~~~~~-g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi-~~~i~~~~~G~l~d~~g~ 200 (326)
+++||..+......... +...++ ..+.+.|....+|.+ ..++...+..+ +.+++.++.|++.||++.
T Consensus 326 Ll~n~~f~~~~l~~~~~~~~~~~~--~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~ 396 (633)
T TIGR00805 326 LLCNPIYMLVILAQVIDSLAFNGY--ITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKL 396 (633)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecc
Confidence 78888776544322222 111121 123334555556654 56666655555 457899999999999874
No 90
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.24 E-value=7e-09 Score=100.06 Aligned_cols=268 Identities=12% Similarity=0.091 Sum_probs=147.7
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+++++|++.|...+...+++.+.-|++ ++++++.+++++...++|..+|+.+...+.. ..|||.
T Consensus 116 ~~~~~l~gig~g~~~~~~~~l~~~~f~~~--------~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~------~~g~~~ 181 (500)
T PRK09584 116 YMGMATIAVGNGLFKANPSSLLSTCYEKD--------DPRLDGAFTMYYMSINIGSFFSMLATPWLAA------KYGWSV 181 (500)
T ss_pred HHHHHHHHHhhhcccCCHHHHHHHhcCCC--------chhhhhcchHHHHHHHHHHHHHHHHHHHHHH------hhCHHH
Confidence 35678999999998887777777776532 3355667888888889999999988876643 246888
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccc---cccch-hhhchh------------------hhhHH-------------HHHH
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDK---GEKET-ADASVN------------------FYSYL-------------VSLS 126 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~---~~~~~-~~~~~~------------------~~~~~-------------~~~~ 126 (326)
.|.+..+...++.+..++.++..++ +++.+ .+.... +..+. ....
T Consensus 182 ~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (500)
T PRK09584 182 AFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFG 261 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8876554444444333332211111 11000 000000 00000 0000
Q ss_pred HHHHH--hhcchhhHHHHHHHHHHHHHHHHHH---------hhccccccc-ccccch-hhHHHHHHHHHHHHHHHhhh--
Q 020441 127 KSITT--LLADVRMLLIIPLFAYSGLQQAFVW---------AEFTKEIVT-PALGVS-GVGGAMAVYGAFDAICSLAA-- 191 (326)
Q Consensus 127 k~~~~--~~~~~~~lll~p~~~~~g~~~~f~~---------~~~~~~~~~-~~lg~~-~~~~~~~~~gi~~~i~~~~~-- 191 (326)
++..+ ...++|.+...+.++.. ..|+. ..+...... +..|.. ..++...+.++..++.+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~---i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~ 338 (500)
T PRK09584 262 KEAFAMKGAARRKMIVAFILMLEA---IIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAA 338 (500)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHH---HHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHH
Confidence 01001 11123444433332211 11221 111111111 112322 24455567776666776666
Q ss_pred --hhhccCCCChhhHHHHHHHHHHHHHHHHHh--cccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-ch
Q 020441 192 --GRLTTGLPSITFIVSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TE 266 (326)
Q Consensus 192 --G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~ 266 (326)
+|+.||.+... .+.+|.++..+.+..+.. ...++......+.....++++|++.....+..+++..+..|++ +.
T Consensus 339 ~~~~l~~r~~~~~-~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg 417 (500)
T PRK09584 339 IYNKMGDRLPMPH-KFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMG 417 (500)
T ss_pred HHHHhCcCCCcHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHH
Confidence 66677766543 566676666655543221 2211111122345677789999999999999999999999987 56
Q ss_pred hhhhHHHHHHHHHHHHHHHHh
Q 020441 267 GAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 267 ~~fa~~~~~~~~g~~i~~~i~ 287 (326)
...+.+.+.+++|..++-.+.
T Consensus 418 ~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 418 FIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 678888888888877766655
No 91
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.16 E-value=3.6e-09 Score=96.53 Aligned_cols=284 Identities=11% Similarity=0.054 Sum_probs=147.5
Q ss_pred HhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHH--HHhcCCCCCCCCCchhhH
Q 020441 6 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITL--AVLKDDKGGSTSGTTLLF 83 (326)
Q Consensus 6 ~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~--~~~~~~~~~~~~~~~~~f 83 (326)
.++|.-.|.-|.+.+..++..-+| ++||+..|++-...+.|..+-+++.. .+.. ..+||..|
T Consensus 125 ~lng~fQg~Gwpp~~~~i~~Wfsr----------~eRG~~~siWn~shNiGGal~~~~~~la~~~~------~~~w~~~f 188 (448)
T COG2271 125 VLNGWFQGMGWPPCARTITHWFSR----------KERGTWWSIWNTSHNIGGALAPLVALLAFFAF------HGGWRAAF 188 (448)
T ss_pred HHHHHHhcCCCcHHHHHHHHHcCc----------cccCceEEEehhhhhcccchHHHHHHHHHHHh------ccchhHHH
Confidence 578888888899998889888885 47998777776666655444333331 1111 23688777
Q ss_pred HHHHHHHHHHHHHH-HHccCCcccc---c-----cchhh---hchhhh-hHHHHHHHHHHHhhcchhhHHHHHHHHHHHH
Q 020441 84 IVFLGVITLGTILM-CFLRKEEDKG---E-----KETAD---ASVNFY-SYLVSLSKSITTLLADVRMLLIIPLFAYSGL 150 (326)
Q Consensus 84 ~~~~~i~~l~~~l~-~~l~~~~~~~---~-----~~~~~---~~~~~~-~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~ 150 (326)
++=.+++++-.++. +.+|+++++. + +|..| ++++.+ .+.+|.+.+. +++||...++.....+.-.
T Consensus 189 ~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~Y--VL~Nk~iW~la~a~vfvYi 266 (448)
T COG2271 189 YFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKY--VLKNKLIWLLALANVFVYV 266 (448)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHH--HHcChHHHHHHHHHHHHHH
Confidence 65554444433333 3444432211 0 11111 111111 3456655543 6678776655432221110
Q ss_pred HHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCC--CChhhHHHHHHHHHHHHHHHHHhcccCC
Q 020441 151 QQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGL--PSITFIVSGGAIAQVVVFLWILINYSVT 226 (326)
Q Consensus 151 ~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~--g~~~~i~~~g~i~~~~~~~~~~l~~~~~ 226 (326)
. =+-..+-.+.|..+..|.+ ........+=.+...|+++.|+++||. |||.+.-++..+....+.+. ....|+
T Consensus 267 v-R~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~--~w~~~~ 343 (448)
T COG2271 267 V-RYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVL--YWLAPN 343 (448)
T ss_pred H-HHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHH--HHcCCC
Confidence 0 0001122334445555543 677788888889999999999999984 56643322222222222221 122333
Q ss_pred CCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHH-HHHHHHHHhhhhh----HHHHHHHHH
Q 020441 227 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCA-SIAVVFFIGPYIS----LQAMLIVMV 300 (326)
Q Consensus 227 ~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~-g~~i~~~i~~~~~----~~~~~~~~~ 300 (326)
.+ +....++.+..|+.--.=|..+-....|..|++- .++-+.-.++..+ |++.+-..-.++. ...-.+++.
T Consensus 344 ~~---~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~ 420 (448)
T COG2271 344 GS---YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLS 420 (448)
T ss_pred cc---HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHH
Confidence 21 2344555555666555445444445556666653 4455677777777 6555544444441 222233334
Q ss_pred HHHHHHHHHHHHH
Q 020441 301 VGICVALVGILFL 313 (326)
Q Consensus 301 ~~~~~~~~~~~~~ 313 (326)
+.++++.+.++.+
T Consensus 421 ~~a~l~~lll~~~ 433 (448)
T COG2271 421 IAALLAILLLLPV 433 (448)
T ss_pred HHHHHHHHHHHHH
Confidence 4444454444443
No 92
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.16 E-value=1.9e-08 Score=94.27 Aligned_cols=251 Identities=12% Similarity=0.094 Sum_probs=153.5
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
|...|++.|++.|.+| +...|+...-|+ ++|++..|++.+...+|.++|++++-.+. ..|||
T Consensus 118 L~i~R~llGvaEA~~~-A~~syI~~WfP~----------kER~ratsi~~sg~~vG~~Ia~~L~qll~-------s~gWr 179 (511)
T TIGR00806 118 MQLMEVFYSVTMAARI-AYSSYIFSLVPP----------SRYQRAAAYSRAAVLLGVFLSSVLGQLLV-------TLGWI 179 (511)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHCCH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCch
Confidence 3578999999999999 999999999994 58999999999888999888888887632 13565
Q ss_pred hh---HHHHHHHHHHHHHHHHHccCCccc----cc---------c-chhhhc----hh------hhhHHHHHHHHHHHhh
Q 020441 81 LL---FIVFLGVITLGTILMCFLRKEEDK----GE---------K-ETADAS----VN------FYSYLVSLSKSITTLL 133 (326)
Q Consensus 81 ~~---f~~~~~i~~l~~~l~~~l~~~~~~----~~---------~-~~~~~~----~~------~~~~~~~~~k~~~~~~ 133 (326)
.+ ..+-++..+++.++++|||.+++. ++ + ++.+.+ .. ....+++..++..+..
T Consensus 180 ~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y 259 (511)
T TIGR00806 180 SYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIY 259 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHh
Confidence 43 333345567778889999966541 00 0 000000 00 0011233344444455
Q ss_pred cchhhHHHHHHHHHHHHHHHHHH-hhccccc---ccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHH
Q 020441 134 ADVRMLLIIPLFAYSGLQQAFVW-AEFTKEI---VTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA 209 (326)
Q Consensus 134 ~~~~~lll~p~~~~~g~~~~f~~-~~~~~~~---~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~ 209 (326)
+|++.+.-. ..+.--..+|+- ..|.+.+ +.+... ++.|.+..+.-+..++.++..|.+..++.+.. .+.++.
T Consensus 260 ~n~~vl~WS--lWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~-~yNG~veA~~tllga~~a~~ag~~~~~w~~~~-~l~l~v 335 (511)
T TIGR00806 260 RNPQLLLWS--LWWVFNSAGYYLITYYVHTLWGTLDESLN-KYNGAVDAASTLLGAITSFIAGFVNIRWARWS-KLLIAV 335 (511)
T ss_pred cCcchhhhh--HHHHHHhhHHHHHHHHHHHHHHHcCCCcc-ccCCHHHHHHHHHHHHHHHHHHhhcCCchhhH-HHHHHH
Confidence 666655422 232211111111 1111111 111111 26677888888888889999998865554321 222332
Q ss_pred HHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHH
Q 020441 210 IAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCA 278 (326)
Q Consensus 210 i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~ 278 (326)
+..+...++.+..+.++ .+..++.+++++..+....+...+-+++...+++ +..|++..+.--+
T Consensus 336 ~s~~~~gll~~m~~t~~-----Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~ 400 (511)
T TIGR00806 336 VSAIQAGLVFWMSQSHD-----IWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATA 400 (511)
T ss_pred HHHHHHHHhhhhhcccc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHH
Confidence 22221222223456555 5889999999999999999999999999888776 6688876664433
No 93
>PRK11462 putative transporter; Provisional
Probab=99.14 E-value=4.2e-08 Score=93.72 Aligned_cols=226 Identities=11% Similarity=0.026 Sum_probs=110.4
Q ss_pred CcchhhhhHHHHHHHHHhHHHHHHHHHHHhc-CCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchh
Q 020441 39 GTVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVN 117 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~iiG~li~~~~~~-~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~ 117 (326)
+++|.+..++.....+.|..+++++..-+.. ..++....+|+....++.+++++...+.++.. +|+++++.
T Consensus 141 ~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~---kE~~~~~~----- 212 (460)
T PRK11462 141 PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTT---KERVEAPP----- 212 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcc---eeccCCCc-----
Confidence 5688888888777767776666666432222 11111124566555555444444433333322 22211100
Q ss_pred hhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHH---Hhhcccccccccccch-hhHHHHHHHHHHHHHHHhhhhh
Q 020441 118 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFV---WAEFTKEIVTPALGVS-GVGGAMAVYGAFDAICSLAAGR 193 (326)
Q Consensus 118 ~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~---~~~~~~~~~~~~lg~~-~~~~~~~~~gi~~~i~~~~~G~ 193 (326)
++.+.++.+++ +++||..+.+....+......... ..+|.+ | .+|.. ..+.++.++++..+++.++.++
T Consensus 213 ~~~~~~~~l~~---~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~-y---~~g~~~~~~~~l~~~~i~~iig~~l~~~ 285 (460)
T PRK11462 213 TTTSMREDLRD---IWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVT-W---ILGTPEVFVAFLTTYCVGNLIGSALAKP 285 (460)
T ss_pred cCCCHHHHHHH---HhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhh-h---hcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12235555444 455765544432222221111111 112221 2 23322 3345567788888999999999
Q ss_pred hccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhcc-------CCch
Q 020441 194 LTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK-------HDTE 266 (326)
Q Consensus 194 l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~-------~~~~ 266 (326)
+.||+++|+ ++..+........+..+ ..++++ ....++..+++|++.+..+....+++++.-+ ++++
T Consensus 286 l~~r~gkk~-~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~ 359 (460)
T PRK11462 286 LTDWKCKVT-IFWWTNALLAVISLAMF-FVPMQA----SITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLT 359 (460)
T ss_pred HHHHhChHH-HHHHHHHHHHHHHHHHH-HhchhH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCch
Confidence 999999885 54433332222111111 122221 1234445566788877777766777776644 2223
Q ss_pred h-hhhHHHHHHHHHHHHHHH
Q 020441 267 G-AFAQLKVWQCASIAVVFF 285 (326)
Q Consensus 267 ~-~fa~~~~~~~~g~~i~~~ 285 (326)
. .++.+.+.+-+|.+++..
T Consensus 360 g~~~a~~~f~~Klg~alg~~ 379 (460)
T PRK11462 360 GISFAGTLFVLKLGLAFGGA 379 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 2 345544445444444433
No 94
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.12 E-value=1.4e-08 Score=97.10 Aligned_cols=270 Identities=14% Similarity=0.117 Sum_probs=163.9
Q ss_pred hHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhH
Q 020441 4 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLF 83 (326)
Q Consensus 4 a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f 83 (326)
...+.+++.+...++.-.+..|..+++ ++..+...+..|.....|.++|..++-.+... .+|+..|
T Consensus 126 ~~~l~~~~~a~~dv~~da~~~e~~~~~--------~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~------~~~~~~f 191 (468)
T TIGR00788 126 FIFLAALAKALYDVLVDSLYSERIRES--------PSAGPSLVSWMWGASATGGLISSLLGGPLLDK------TLTRILF 191 (468)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhhcC--------CCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHh------cCcchHH
Confidence 346777788888787777777777621 22344566778888888999998888765432 2588778
Q ss_pred HHHHHHHHHHHHHHHHccCCcc-ccccchhh-------hchhhhhHHHHHHHHHHHhhcchhhHH-HHHHHH-HHHHHHH
Q 020441 84 IVFLGVITLGTILMCFLRKEED-KGEKETAD-------ASVNFYSYLVSLSKSITTLLADVRMLL-IIPLFA-YSGLQQA 153 (326)
Q Consensus 84 ~~~~~i~~l~~~l~~~l~~~~~-~~~~~~~~-------~~~~~~~~~~~~~k~~~~~~~~~~~ll-l~p~~~-~~g~~~~ 153 (326)
.+..++..+..+..++++++++ ++++.+++ .......+.++.+++..+.+++|+... +...++ +... .+
T Consensus 192 ~~~a~l~ll~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~-~~ 270 (468)
T TIGR00788 192 LITAALLLLQLFVSNLSKERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANL-PG 270 (468)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhc-CC
Confidence 7665555555444566655421 11110000 001111234566677777787777654 222222 1110 00
Q ss_pred HHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-h--cccCCCC
Q 020441 154 FVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-I--NYSVTSG 228 (326)
Q Consensus 154 f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l--~~~~~~~ 228 (326)
.....| .+....+|. +.+|.+....+++++++....+++.+|++.|+ ++..+.++......... + .+.....
T Consensus 271 ~~~~~f--~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~-~l~~~~~l~~~~~~~~~~l~~~~~~~~g 347 (468)
T TIGR00788 271 ASGSVF--CATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRL-LFGVTTLLYTLSSLFDLILVKRWNLAFG 347 (468)
T ss_pred CCceeE--EEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHH-HHHHHHHHHHHHHhCceeeeeccccccC
Confidence 000111 022234554 47889999999999999999999999999874 66666666554432111 1 1110000
Q ss_pred CcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 229 VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 229 ~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
..+........++-+++.+........++.+..|++. .+.|+.+...+++|..++..++..+.
T Consensus 348 i~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~ 411 (468)
T TIGR00788 348 ISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLM 411 (468)
T ss_pred CCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0011234455677788888888888999999999775 66899999999999999888776653
No 95
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.11 E-value=6.9e-09 Score=94.67 Aligned_cols=248 Identities=11% Similarity=0.025 Sum_probs=136.8
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+..++++|++.+- ....-.++.+.=| |+++|...|++- .-++|..+-.+++..+..... ...|+.
T Consensus 109 l~~gll~G~~Gas-Fav~m~~~s~~fP----------~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g---~~~w~~ 173 (417)
T COG2223 109 LVIGLLLGLAGAS-FAVGMPNASFFFP----------KEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG---FLAWRN 173 (417)
T ss_pred HHHHHHHhcccce-ehcccccccccCC----------hhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh---hHHHHH
Confidence 5678899988554 4445566777777 469999999986 556666555555544433210 002676
Q ss_pred hHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHH--hhc
Q 020441 82 LFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW--AEF 159 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~--~~~ 159 (326)
.-.++....++..+.+.+.-+...|.+.+ .+ +..+ +++|. +.++++.-.+. .+|....-+|.. ..+
T Consensus 174 ~~~i~~~~l~v~~v~~~~~~~d~p~~r~~---~~--~~~~--~~~~~---v~~~~~~W~ls--llY~~tFG~Fvgfs~~l 241 (417)
T COG2223 174 VAGIYVVALAIAAVLAWLGMNDVPEHRAS---VK--PQLP--AQLKA---VFSNKDTWLLS--LLYFATFGGFVGFSAYL 241 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCChhhhcc---cc--ccch--hHHHH---HhcCcchHHHH--HHHHHHHHHHHHHHHHH
Confidence 66666666666555554432222221110 00 0011 23332 44566655443 344433333321 222
Q ss_pred ccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCC-C-cchHHH
Q 020441 160 TKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSG-V-LGTLYP 235 (326)
Q Consensus 160 ~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~-~-~~~~~~ 235 (326)
+ +|..+..|.+ ..+....++.+...+..+.+|+++||+|+++ +........+++... +.+.++.. . ......
T Consensus 242 ~-~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~r-v~~~~f~~~~~~~~~--l~~~~~~~~~~~~~~~~ 317 (417)
T COG2223 242 P-MYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRR-VTLAVFVGMALAAAL--LSLFLTGFGHGGSFVVF 317 (417)
T ss_pred H-HHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchh-HHHHHHHHHHHHHHH--HHccccccccCcchHHH
Confidence 2 3444444544 5567788888999999999999999999875 443333333322221 12222111 0 012344
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHH
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASI 280 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~ 280 (326)
+...+.++++.+.-|...+.++...||++...+-+.....-++|+
T Consensus 318 ~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGG 362 (417)
T COG2223 318 VAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGG 362 (417)
T ss_pred HHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccc
Confidence 555667777788888888888888888765544444444445554
No 96
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.11 E-value=3.7e-08 Score=89.51 Aligned_cols=276 Identities=12% Similarity=0.119 Sum_probs=165.1
Q ss_pred hHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCC-----C--C---
Q 020441 4 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD-----K--G--- 73 (326)
Q Consensus 4 a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~-----~--~--- 73 (326)
+-.+.|.|.+.+-++.+.|++...++ ++-.+-..+..++..+|.++|+++...+...+ + +
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~----------~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~ 179 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKP----------ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILA 179 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCc----------hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHH
Confidence 44688999999999999999999984 45556667788888999999999976543311 0 0
Q ss_pred ---CCCCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHH-HHHHHHHHH
Q 020441 74 ---GSTSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLL-IIPLFAYSG 149 (326)
Q Consensus 74 ---~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ll-l~p~~~~~g 149 (326)
-....++.+|..+...-.+-.+.....|.|+.++.+++. .+ .++.. ..+++++|+..+ ..-.++|.|
T Consensus 180 ~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~-~~-~~~~~-------~~~l~~~~~~~~gvl~~FlYVG 250 (422)
T COG0738 180 IKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSL-GA-SGSAG-------LSSLFQNKHLRLGVLAIFLYVG 250 (422)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccc-cc-cccch-------HHHHHhChHHHHHHHHHHHHHh
Confidence 011236677876654443334444555555444332211 11 11101 122556666544 334689999
Q ss_pred HHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHH-HHHHHHHHHhcccCC
Q 020441 150 LQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIA-QVVVFLWILINYSVT 226 (326)
Q Consensus 150 ~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~-~~~~~~~~~l~~~~~ 226 (326)
.+.+.+. +..+|..+..|. .+.......+..+.++|..++-++.+|+...+ .+.+-++. ..++... ...++
T Consensus 251 ~Eva~gs--fl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k-~Laf~a~~~ill~~~~---~l~~g 324 (422)
T COG0738 251 AEVAIGS--FLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEK-YLAFYALIAILLLLAV---ALIGG 324 (422)
T ss_pred HHHHHHH--HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHHH---HHhcC
Confidence 9987752 222344443443 46667777888888888877777777777665 33333322 2222221 22333
Q ss_pred CCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Q 020441 227 SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVA 306 (326)
Q Consensus 227 ~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~ 306 (326)
...+...++.|+..+...++++++--+..|++.+ .-|..-..-.+|+++.+.+...+.-+.... .....+.
T Consensus 325 ------~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts-~~s~~l~maivGGAiiP~l~G~i~d~~g~~--~~~~~~p 395 (422)
T COG0738 325 ------VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTS-VGSGLLVMAIVGGAIIPPLQGVIADMFGIQ--LTFLIVP 395 (422)
T ss_pred ------hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccc-ccceeeeeheecchHHHHHHHHHHHhhhhH--HHHHHHH
Confidence 3445567778999999999999999888885443 223344445678888888887775332111 1112445
Q ss_pred HHHHHHH
Q 020441 307 LVGILFL 313 (326)
Q Consensus 307 ~~~~~~~ 313 (326)
++||+++
T Consensus 396 llc~lyV 402 (422)
T COG0738 396 LLCYLYV 402 (422)
T ss_pred HHHHHHH
Confidence 5555555
No 97
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.10 E-value=4.5e-14 Score=134.07 Aligned_cols=275 Identities=16% Similarity=0.124 Sum_probs=137.9
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++++|+++|++.|..++....|++|.+| +++||+..++....+.+|..+|.+++.......+ ++.||
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~----------~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~---~~~Wr 171 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAP----------PKHRGFLSSLFQLFWALGILLASLIGYIVSYYSD---NWGWR 171 (451)
T ss_pred cccccccccccccccccccccccccccc----------cccccccccccccccccccccccccccccccccc---ccccc
Confidence 3578999999999999999999999999 4688988887766666676666666655422221 46799
Q ss_pred hhHHHHHHHHHHHHHHHHHccCCcc-----ccccc------h---hhhchhhhhHHHHHHH-------HHHHhhcchh--
Q 020441 81 LLFIVFLGVITLGTILMCFLRKEED-----KGEKE------T---ADASVNFYSYLVSLSK-------SITTLLADVR-- 137 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~l~~~~~-----~~~~~------~---~~~~~~~~~~~~~~~k-------~~~~~~~~~~-- 137 (326)
..+..-.+..++..+...++|+.++ .++++ + .+.++.+..+.+++.+ +..+++++++
T Consensus 172 ~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 251 (451)
T PF00083_consen 172 ILLIFGAIPSLLVLLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYR 251 (451)
T ss_pred ccccccccccccccccccccccccceecccccccccccccccccccccccccccccccccccccccceeeeecccccccc
Confidence 7765443333333344455653211 00000 0 0000000000011111 1122333322
Q ss_pred --hHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHH
Q 020441 138 --MLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 215 (326)
Q Consensus 138 --~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~ 215 (326)
.+....+.....+...+....|.+.+. +..+.+..-......++...++......+.||+|||+ +++.+......+
T Consensus 252 ~~~~~~~~l~~~~~~~g~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GRr~-~~i~~~~~~~~~ 329 (451)
T PF00083_consen 252 KRLLIALLLQFFQQFSGINFIFYYSPSIF-ENAGISNSFLATLILGLVNFLGTLLAIFLIDRFGRRK-LLIIGLLLMAIC 329 (451)
T ss_pred ccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc-cccccccccccc
Confidence 222111111111111111122222221 1223222222334555566667777778899999995 666665554433
Q ss_pred HHHHH--hcccCCCC-CcchHHHHHHHHHH-hhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 216 FLWIL--INYSVTSG-VLGTLYPLIMAALL-GIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 216 ~~~~~--l~~~~~~~-~~~~~~~~~~~~l~-G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+.+. ....++.+ +.+ ....+...++ ......+.+..+.+.+|+||.+ |..+.+.......+++.++..+.+.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~ 408 (451)
T PF00083_consen 330 SLILGIIFFLGVSSSSWWS-ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYL 408 (451)
T ss_pred ccccccccccccccccccc-cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 32211 11111111 101 1112222222 2333356666678889999987 66677766666667777776666554
Q ss_pred h
Q 020441 291 S 291 (326)
Q Consensus 291 ~ 291 (326)
.
T Consensus 409 ~ 409 (451)
T PF00083_consen 409 F 409 (451)
T ss_pred c
Confidence 3
No 98
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=99.10 E-value=4.9e-11 Score=95.99 Aligned_cols=62 Identities=37% Similarity=0.770 Sum_probs=57.6
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCC
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK 72 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~ 72 (326)
++|+++++|+|++++|++|+.|++++++ |++|+|++|++|+++++++++||++.+++++.++
T Consensus 92 l~~~s~l~G~~~a~lW~aqg~ylt~~s~----------~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~~~~ 153 (156)
T PF05978_consen 92 LYPASALLGFGAALLWTAQGTYLTSYST----------EETIGRNTGIFWAIFQSSLIFGNLFLFFIFQGQT 153 (156)
T ss_pred HHHHHHHHhhhhHHhhHhhhHHHHHcCC----------HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 4799999999999999999999999999 4689999999999999999999999999987654
No 99
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.09 E-value=5.7e-09 Score=101.03 Aligned_cols=86 Identities=15% Similarity=0.143 Sum_probs=63.0
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
++.+|+++|+|.|..-.....|++|.+|+ +.||...+.+......|..+|.++++..-.. . ++||
T Consensus 145 l~~GR~l~G~g~G~~~~~~piy~sEiap~----------~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~----~-~~Wr 209 (513)
T KOG0254|consen 145 LIVGRILTGLGVGGASVLAPVYISEIAPA----------HIRGTLVSLYQLFITIGILLGYCINYGTSKV----Y-AGWR 209 (513)
T ss_pred HHHHHHHhccchhhhhhcchhhHhhcCCh----------hhhHHHHHHHHHHHHHHHHHHHHHhhhhccC----C-ccHH
Confidence 46799999999999999999999999994 5899888877666666666665444433211 1 6899
Q ss_pred hhHHHHHHHHHHHHHHHHHcc
Q 020441 81 LLFIVFLGVITLGTILMCFLR 101 (326)
Q Consensus 81 ~~f~~~~~i~~l~~~l~~~l~ 101 (326)
.++.+..+.+++..+..+++|
T Consensus 210 ~~~~~~~i~~~~~~~~~~~~p 230 (513)
T KOG0254|consen 210 IPLGLALIPAVILALGMLFLP 230 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 888766555555555556665
No 100
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.08 E-value=9.1e-09 Score=98.82 Aligned_cols=284 Identities=16% Similarity=0.142 Sum_probs=170.4
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL 82 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~ 82 (326)
-.+++.|+|.|..+..+.+.+..+=+| ||+...|+-.+...++.++=+.+...+... -|||..
T Consensus 140 t~gvi~G~G~~~~~~paiviv~~YF~k-----------kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~------~G~r~~ 202 (509)
T KOG2504|consen 140 TFGVIGGLGLGLIYLPAVVILGTYFEK-----------KRALATGIAVSGTGVGTVVFPPLLKYLLSK------YGWRGA 202 (509)
T ss_pred HHHHHhhccchhhhcchhhhhhhHhHH-----------HHHHHHhhhhccCCcceeeHHHHHHHHHHH------hCcHHH
Confidence 357889999999999998888877774 899999988766665543322232223222 368877
Q ss_pred HHHHHHHHHHHHHHHHHccCCccc----------------------------cccch-h----------hhchhhhhHHH
Q 020441 83 FIVFLGVITLGTILMCFLRKEEDK----------------------------GEKET-A----------DASVNFYSYLV 123 (326)
Q Consensus 83 f~~~~~i~~l~~~l~~~l~~~~~~----------------------------~~~~~-~----------~~~~~~~~~~~ 123 (326)
+.++..+.+-.++..+..|+...+ +++.. . +..+.+.....
T Consensus 203 ~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (509)
T KOG2504|consen 203 LLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSP 282 (509)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccc
Confidence 777776665555666666651110 00000 0 00000001001
Q ss_pred HHHHHH---HHhhcchhhHHHHH--HHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhcc
Q 020441 124 SLSKSI---TTLLADVRMLLIIP--LFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTT 196 (326)
Q Consensus 124 ~~~k~~---~~~~~~~~~lll~p--~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d 196 (326)
++-... +++++|+..+++.. .+.+.|+...++. .+.+.. ..|. ++....+.+.|++++++.++.|.+.|
T Consensus 283 ~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~---l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD 358 (509)
T KOG2504|consen 283 LQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVY---LPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLAD 358 (509)
T ss_pred hhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHH---HHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcC
Confidence 111111 45778877665432 2333343333321 112222 3343 47788889999999999999999999
Q ss_pred CCCChh-hHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHH
Q 020441 197 GLPSIT-FIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKV 274 (326)
Q Consensus 197 ~~g~~~-~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~ 274 (326)
+...++ .+..++.+...+... ++....+ +.......+++|++.+.+....+.++.++.+.++ ..+++...+
T Consensus 359 ~~~~~~~~~~~~~ll~~gl~~~--~~p~~~~-----~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~ 431 (509)
T KOG2504|consen 359 KPGIRALVLFLLTLLIAGLARL--FLPFATT-----YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLL 431 (509)
T ss_pred ccccchHHHHHHHHHHHHHHHH--HHHHhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHH
Confidence 877432 233333333333221 1222222 3567888899999999999999999999998776 679999999
Q ss_pred HHHHHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHHHH
Q 020441 275 WQCASIAVVFFIGPYIS-----LQAMLIVMVVGICVALVGILFLT 314 (326)
Q Consensus 275 ~~~~g~~i~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 314 (326)
+++++..+++-+...+. .....+..-...+++..+++...
T Consensus 432 ~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 432 FQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99999999998887663 11222333333445554554444
No 101
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.04 E-value=1.3e-08 Score=97.76 Aligned_cols=123 Identities=15% Similarity=0.206 Sum_probs=89.4
Q ss_pred ccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 162 EIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 162 ~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~-~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
.|.++.+|.+ ....+...+.....+..+++|+++|| +|||+ .+..+.++..+..++..+. ++. +...++.
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~-~~~~g~~~~~~g~~~~~~~--~~~----~~ll~~~ 111 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKR-TIVLGAIVLAIGYFMTGMS--LLK----PDLIFIA 111 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHH-HHHHHHHHHHHHHHHHHHh--ccc----hhHHHHH
Confidence 3445556654 45566666776777788899999999 99996 7777777666554433322 221 1234455
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC--c-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD--T-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~--~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.++.|++.+...+...+++++.||++ + +.+|+.+....++|+++++.+.+++.
T Consensus 112 ~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~ 167 (489)
T PRK10207 112 LGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIA 167 (489)
T ss_pred HHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 66779999999999999999999865 2 44799999999999999988888775
No 102
>PRK09848 glucuronide transporter; Provisional
Probab=99.04 E-value=2.1e-07 Score=88.45 Aligned_cols=149 Identities=12% Similarity=-0.021 Sum_probs=86.6
Q ss_pred hhcchhhHHHHHHHHHHHHH-HHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHH
Q 020441 132 LLADVRMLLIIPLFAYSGLQ-QAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGG 208 (326)
Q Consensus 132 ~~~~~~~lll~p~~~~~g~~-~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g 208 (326)
+++||+........+..... ..+. ...+-+.+..+|.+ ..++......++..++.++.+++.||+++|+ .+..+
T Consensus 224 l~~n~~f~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~-~~~~g 300 (448)
T PRK09848 224 LKRNRPLFMLCIGALCVLISTFAVS--ASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKN-TFLIG 300 (448)
T ss_pred HhCCchHHHHHHHHHHHHHHHHHHh--hhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHH
Confidence 66788876543222222111 1111 11222334445543 2233333335567788999999999999885 66667
Q ss_pred HHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-------c-hhhhhHHHHHHHHHH
Q 020441 209 AIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-------T-EGAFAQLKVWQCASI 280 (326)
Q Consensus 209 ~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-------~-~~~fa~~~~~~~~g~ 280 (326)
.++.....+... +.++.+ .+..++..++.|++.+..++...++..+.-|.+ + ...++.+++.+-+|.
T Consensus 301 ~~~~~i~~~~~~--~~~~~~---~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~ 375 (448)
T PRK09848 301 ALLGTCGYLLFF--WVSVWS---LPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQ 375 (448)
T ss_pred HHHHHHHHHHHH--HcCchh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHH
Confidence 665554433222 222211 244455567789999999988888888876632 2 334668888888887
Q ss_pred HHHHHHhh
Q 020441 281 AVVFFIGP 288 (326)
Q Consensus 281 ~i~~~i~~ 288 (326)
+++..+..
T Consensus 376 aig~~i~g 383 (448)
T PRK09848 376 AIGGSIPA 383 (448)
T ss_pred HHHHHHHH
Confidence 77766554
No 103
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.95 E-value=1.2e-06 Score=80.21 Aligned_cols=254 Identities=16% Similarity=0.136 Sum_probs=149.5
Q ss_pred HhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHH
Q 020441 6 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIV 85 (326)
Q Consensus 6 ~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~ 85 (326)
++.|+|.+.--++-.+.+++.++ |++|++..++.|.+.-.|.+++.++...++.+.++ -|. .-+
T Consensus 97 ~l~G~G~~~s~T~~lALl~D~~~----------e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~-----~rL-~~v 160 (403)
T PF03209_consen 97 LLYGLGVHASGTSFLALLADLAP----------EERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP-----ERL-IQV 160 (403)
T ss_pred HHHHhhHhHhHHHHHHHHHhcCC----------HhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH-----HHH-HHH
Confidence 45566666655655566666666 78999999999999999999999988777665331 121 111
Q ss_pred HHHHHHHH---HHHHHHc-cCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhh-cc
Q 020441 86 FLGVITLG---TILMCFL-RKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAE-FT 160 (326)
Q Consensus 86 ~~~i~~l~---~~l~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~-~~ 160 (326)
+-....+. .+++++= .++..+.. +.+++++.++++..++. ..||+..... .++..+. .+|...+ .-
T Consensus 161 ~~~~a~i~~~l~~ia~wg~E~r~~~~~----~~~~~~~~~f~~a~~~~---~~~~~a~~f~-~fl~l~t-~a~~~QD~iL 231 (403)
T PF03209_consen 161 IQGVALIALLLNLIALWGQEPRRSRRA----AAAERPRPPFREAWRQV---WASPQARRFF-VFLFLGT-LAFFMQDVIL 231 (403)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCcccc----cCCCCCCccHHHHHHHH---HhCCChhHHH-HHHHHHH-HHHHhhHHHc
Confidence 11112222 2222321 11111111 11122344566665554 3566655443 2222222 2222221 11
Q ss_pred cccccccccch--hhHHHHHHHHHHHHHHHhhhhhhcc-CCCChhhHHHHHHHHHHHHHHHHHhc-ccCCCCCcchHHHH
Q 020441 161 KEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTT-GLPSITFIVSGGAIAQVVVFLWILIN-YSVTSGVLGTLYPL 236 (326)
Q Consensus 161 ~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d-~~g~~~~i~~~g~i~~~~~~~~~~l~-~~~~~~~~~~~~~~ 236 (326)
+-|..+.+|.+ ++.......+.+..++-...|++.. |.+++ ..-..|+...+.++.++.+. ...+ ++.+-
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-~~a~~G~~~~~~~f~lii~a~~~~~-----~~~~~ 305 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-RTAALGCLLGALAFALIILAGPLGS-----PWLFR 305 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHhccc-----chHHH
Confidence 22555566654 6777788888888888888898765 45555 35556666655555432222 2222 25667
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...+++|++.+.+..-.-+.+=++.+++ .....+.+...|+++.+++-+.+..+
T Consensus 306 ~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~ 360 (403)
T PF03209_consen 306 PGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGAL 360 (403)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999876666655666544 45567799999988888888877544
No 104
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.94 E-value=4.9e-07 Score=84.61 Aligned_cols=155 Identities=16% Similarity=0.139 Sum_probs=104.2
Q ss_pred HHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccccccccccc---chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhH
Q 020441 128 SITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG---VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI 204 (326)
Q Consensus 128 ~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg---~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i 204 (326)
+.++++|||+.+...-..+..+...+.+++.++ .|.++ +| .+..+..+.+..++|+..-...+|+.+|+|.++ +
T Consensus 199 ~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~-~yl~~-~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~-l 275 (400)
T PF03825_consen 199 DALKLLKNPRFLVFLLAAFLIGISHAAYYTFFS-IYLQE-LGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKW-L 275 (400)
T ss_pred HHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHH-HHHHH-cccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH-H
Confidence 345688999987766556666666666554443 23332 33 235677778888899999999999999999885 7
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH----HHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHH-HHHH
Q 020441 205 VSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM----AALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKV-WQCA 278 (326)
Q Consensus 205 ~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~-~~~~ 278 (326)
+.++.+..++=+.+ ..+.++++ +....+ ..+-|+..+.........+.+..|++ +.++-+.|.. ..++
T Consensus 276 l~~a~~~~~vR~~l--~a~~~~~~----~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl 349 (400)
T PF03825_consen 276 LLLALVAYAVRWLL--YAYFSDPW----PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGL 349 (400)
T ss_pred HHHHHHHHHHHHHH--HHHhcCCc----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence 77777665543322 22322221 222222 34689999999999999999999987 4667776654 4678
Q ss_pred HHHHHHHHhhhhh
Q 020441 279 SIAVVFFIGPYIS 291 (326)
Q Consensus 279 g~~i~~~i~~~~~ 291 (326)
|..++-.++.++-
T Consensus 350 g~~iG~~igG~l~ 362 (400)
T PF03825_consen 350 GGAIGSLIGGWLY 362 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888877663
No 105
>PRK10054 putative transporter; Provisional
Probab=98.94 E-value=4.4e-08 Score=91.69 Aligned_cols=121 Identities=16% Similarity=0.101 Sum_probs=88.8
Q ss_pred cccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHH
Q 020441 163 IVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAA 240 (326)
Q Consensus 163 ~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (326)
+.++.+|. .++++...++.+...+++++.|+++||+|||+ ++..+.+......+. +.+.++ ++..++...
T Consensus 33 ~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~-~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~ 104 (395)
T PRK10054 33 YLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKR-YMLLAITAFASGFIA--IPLVNN-----VTLVVLFFA 104 (395)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHH--HHHHhH-----HHHHHHHHH
Confidence 34444565 47899999999999999999999999999985 666666555443322 223333 234444556
Q ss_pred HHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 241 LLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 241 l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.|.+.+...+...++..+.+|++ +..+++..+...++|.++++.+...+.
T Consensus 105 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~ 156 (395)
T PRK10054 105 LINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLV 156 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777777788888999999866 567889999999999999998887663
No 106
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.93 E-value=9.5e-08 Score=92.21 Aligned_cols=151 Identities=19% Similarity=0.277 Sum_probs=94.8
Q ss_pred ccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 162 EIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 162 ~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~-~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
.|.++.+|.+ ..+.....+........+++|++.|| +|||+ .+..+.++..+..... ...++. ....++.
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~-~~~~g~~~~~ig~~l~--~~~~~~----~~~l~~~ 118 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKR-VIMLGAIVLAIGYALV--AWSGHD----AGIVYMG 118 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH-HHHHHHHHHHHHHHHH--HHhccc----HHHHHHH
Confidence 4555566764 34444444444445556789999999 59985 6666766655443322 222221 1334455
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCc---hhhhhHHHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHH
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYISL----QAMLIVMVVGICVALVGIL 311 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~---~~~fa~~~~~~~~g~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~ 311 (326)
.++.|++.+...+...+++++.||+++ ..+++.+....++|+.+++.+..++.. ....++..+..+++.+.+.
T Consensus 119 ~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~ 198 (500)
T PRK09584 119 MATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFA 198 (500)
T ss_pred HHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence 567899999888888999999998642 347888899999999999999887742 2222333333345555555
Q ss_pred HHHHHHhh
Q 020441 312 FLTIQVEK 319 (326)
Q Consensus 312 ~~~~~~~~ 319 (326)
...+..++
T Consensus 199 ~~~~~~~~ 206 (500)
T PRK09584 199 FCQRWVKQ 206 (500)
T ss_pred HhHHHhcc
Confidence 54444443
No 107
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.93 E-value=8e-08 Score=91.79 Aligned_cols=148 Identities=17% Similarity=0.186 Sum_probs=95.8
Q ss_pred ccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 162 EIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 162 ~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~-g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
.|.++.+|.+ +.+.++..+.....++.+++|+++||+ |||+ .+..+.++.....+. +...++. +...++.
T Consensus 34 ~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr-~iliG~il~~lg~ll--l~~~~~~----~~~~~l~ 106 (493)
T PRK15462 34 LYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRM-AVMLGALLMAIGHVV--LGASEIH----PSFLYLS 106 (493)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHH-HHHHHHHHHHHHHHH--HHHhhcc----hhHHHHH
Confidence 3444445554 677778888888889999999999999 9985 667777666544322 2222211 1223333
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC---chhhhhHHHHHHHHHHHHHHHHhhhhhH----HHHHHHHHHHHHHHHHHHH
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD---TEGAFAQLKVWQCASIAVVFFIGPYISL----QAMLIVMVVGICVALVGIL 311 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~---~~~~fa~~~~~~~~g~~i~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~ 311 (326)
..+.+++.+...+..++++++.||++ |+.+|+.+.....+|+.+++.+.+.+.. +....+..+..+++.+.+.
T Consensus 107 l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 107 LAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHH
Confidence 44555667777788889999999863 5678997777777999999999987742 2222232333455555554
Q ss_pred HHHHH
Q 020441 312 FLTIQ 316 (326)
Q Consensus 312 ~~~~~ 316 (326)
...++
T Consensus 187 ~~~~~ 191 (493)
T PRK15462 187 CGNRH 191 (493)
T ss_pred Hhhhh
Confidence 43333
No 108
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.92 E-value=3e-08 Score=90.35 Aligned_cols=136 Identities=20% Similarity=0.243 Sum_probs=100.8
Q ss_pred cccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH
Q 020441 165 TPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL 242 (326)
Q Consensus 165 ~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 242 (326)
.+.+|. .+++++..++.+...+++++.|++.||+|||+ ++..+.++......... +.++ .+..++..++.
T Consensus 24 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~l~ 95 (352)
T PF07690_consen 24 AEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRR-VLIIGLLLFALGSLLLA--FASN-----FWLLLIARFLL 95 (352)
T ss_dssp HCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHH-HHHHHHHHHHHHHHHHH--HHCC-----HHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCee-eEeehhhhhhhHHHHhh--hhhh-----HHHHhhhcccc
Confidence 344554 47888899999999999999999999999996 77777776665522211 2233 24667788999
Q ss_pred hhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHH
Q 020441 243 GIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALV 308 (326)
Q Consensus 243 G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~----~~~~~~~~~~~~~~~~~ 308 (326)
|++.+...+...+++.+.+|++ +..+++..+...++|..+++.+...+. .....++..++.+++.+
T Consensus 96 g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~i 166 (352)
T PF07690_consen 96 GIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAI 166 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhh
Confidence 9999999999999999999984 677899999999999999999987664 22233444444444443
No 109
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.92 E-value=1.3e-07 Score=86.56 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=100.8
Q ss_pred cccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|.+ +.....+...+..+.|+++.|+|.||+|.|+ ++..+.+......+..+ ...++ ...+++..+.|+
T Consensus 282 ~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~-vl~~~lvi~~~~~~~~~-~~~~~------~~f~i~gll~g~ 353 (438)
T COG2270 282 DLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKP-VLMIGLVILSIAALYLI-FLEGE------LDFWILGLLVGT 353 (438)
T ss_pred HcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCce-eehHHHHHHHHHHHHHH-Hcccc------HHHHHHHHHHHH
Confidence 45554 5566667778888999999999999999884 66666555443332222 22222 346777889999
Q ss_pred hhHHhhhhhHhhHHhhccCCch-hhhhHHHHHHHHHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 020441 245 GDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYIS-----LQAMLIVMVVGICVALVGILFLTIQ 316 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~~~-~~fa~~~~~~~~g~~i~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (326)
..+..|..--++++++.|++++ .-|+.|++..=.++..+++.-..++ ...-...+.+++.++.+.+..+..+
T Consensus 354 s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 354 SLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred hcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 9999999999999999998874 4799999999888888888876664 2233344555566676666555433
No 110
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.91 E-value=9.2e-07 Score=84.25 Aligned_cols=269 Identities=13% Similarity=0.060 Sum_probs=135.8
Q ss_pred hhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcC-------CCCCC--CCCchh
Q 020441 11 AASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD-------DKGGS--TSGTTL 81 (326)
Q Consensus 11 ~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~-------~~~~~--~~~~~~ 81 (326)
+.........+++.|..|++ ++++++..+++....++|.++|++++...... .++.. ..+.|.
T Consensus 127 ~~n~~~~p~rALiaDl~p~~--------~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (477)
T TIGR01301 127 ANNMLQGPCRAFLADLTGGD--------ARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKS 198 (477)
T ss_pred HHHHHHHHHHHhcccccCch--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHH
Confidence 44444444555666666642 22346788888777799999999988754210 01000 123455
Q ss_pred hHHHHHHHHHHHHHHH-HHccCCccccccch--hhhchhhhhHHHHHHHHHHHhhcc-h---hhHHHHHHHHHHHHHHH-
Q 020441 82 LFIVFLGVITLGTILM-CFLRKEEDKGEKET--ADASVNFYSYLVSLSKSITTLLAD-V---RMLLIIPLFAYSGLQQA- 153 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~-~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~k~~~~~~~~-~---~~lll~p~~~~~g~~~~- 153 (326)
.|.+-.++.++...+. +++++.+..++++. +|.++.++.+..+.++++++.+++ | +.+++.-++-..|+.--
T Consensus 199 ~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~vqffsW~a~f~~~ 278 (477)
T TIGR01301 199 CFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLLVTCLNWIAWFPFI 278 (477)
T ss_pred HHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6655433333333333 23333211111110 000000011111223344444433 2 33444444444443311
Q ss_pred HHHhhc-cccccc-----ccc---cchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-hcc
Q 020441 154 FVWAEF-TKEIVT-----PAL---GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INY 223 (326)
Q Consensus 154 f~~~~~-~~~~~~-----~~l---g~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l~~ 223 (326)
++.+.+ .+.+.. ... |+..-.+.++++++...+.+.+.-++.+|+|+|+.++..+.++...++...+ +..
T Consensus 279 ~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~ 358 (477)
T TIGR01301 279 LFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTY 358 (477)
T ss_pred HhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHh
Confidence 111211 111110 001 1112345667788887888888888999998533466666555444443222 221
Q ss_pred -c----C-CC------CCcc-hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-c--hhhhhHHHHHHHHHHHHHHHHh
Q 020441 224 -S----V-TS------GVLG-TLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-T--EGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 224 -~----~-~~------~~~~-~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~--~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
+ + +. +..+ -+..+++..+.|+..+..++.-|+++++.-|++ + ..-.+++|+...+...+.-...
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~ 438 (477)
T TIGR01301 359 VAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGS 438 (477)
T ss_pred hhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 1 1 00 0001 144677888999999999999999999998843 2 3456688888777666655433
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.89 E-value=5.5e-07 Score=84.55 Aligned_cols=259 Identities=14% Similarity=0.060 Sum_probs=128.0
Q ss_pred HhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHH-HHHhcCCCCCCCCCchhhHH
Q 020441 6 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT-LAVLKDDKGGSTSGTTLLFI 84 (326)
Q Consensus 6 ~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~-~~~~~~~~~~~~~~~~~~f~ 84 (326)
.+.|++.+...+-.++...|..++ +++|.+..++-....+.+..+=..+. .++....++-...|++..-.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d---------~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~ 190 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQD---------PQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTAL 190 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCC---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHH
Confidence 345555555555555566666554 45677766655444444422222111 12211111111346665444
Q ss_pred HHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccc
Q 020441 85 VFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIV 164 (326)
Q Consensus 85 ~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~ 164 (326)
++.+++++..+.+++- .+|+..+.++.+...+.++++.++. +++||..+++.-+.+..........+.+. -|.
T Consensus 191 ~~~vi~~i~~l~~~~~---v~ER~~~~~~~~~~~~~~~~~~~~~---~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~-yy~ 263 (467)
T COG2211 191 VLGVIGVILLLFCFFN---VKERVVETQPTKTGVKLKLKDSFLL---IFKNRPLLLLLLMNLLLFIAFNIRGSIMV-YYV 263 (467)
T ss_pred HHHHHHHHHHHHHHHH---hhcccCccccCcccccccHHHHHHH---HHccchHHHHHHHHHHHHHHHHHHhhhhh-eeE
Confidence 4444444443333332 2222111111111122334333222 55676665544333333322221111110 123
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL 242 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 242 (326)
+..+|-. ...+.....+....++.++..++.+|+|+|+ ++..+.++.++.....++ .+++. ....++..++.
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~-~~~~~~~~~~i~~~~~~f-~~~~~----~~l~~~~~~i~ 337 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKK-LFLIGLLLLAVGYLLLYF-TPAGS----VVLIVVALIIA 337 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHH-HHHHHHHHHHHHHHHHHh-hcCcc----hHHHHHHHHHH
Confidence 3345533 3445566677777777899999999999996 888887776655543332 22221 24456666888
Q ss_pred hhhhHHhhhhhHhhHHhhcc------CCc-h-hhhhHHHHHHHHHHHHHHHH
Q 020441 243 GIGDGVLNTQLSALLGILFK------HDT-E-GAFAQLKVWQCASIAVVFFI 286 (326)
Q Consensus 243 G~~d~~~~~~~~~il~~~f~------~~~-~-~~fa~~~~~~~~g~~i~~~i 286 (326)
+++.+..++..-+++++.-+ ..| + ..||...+.+=+|.+++-++
T Consensus 338 ~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 338 GVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred HHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 89999888888888776643 122 2 24555555554444444433
No 112
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.88 E-value=8.7e-08 Score=91.89 Aligned_cols=116 Identities=14% Similarity=0.185 Sum_probs=89.9
Q ss_pred ccch--hhHHHHHHHHHHHHHHHhhhhhhccC-CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 168 LGVS--GVGGAMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 168 lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~-~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
+|.+ +.+.+...+.+...++++++|+++|| +|||+ .+..+.++....... +...++ +...++..++.|+
T Consensus 43 lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~-~l~~~~~~~~~g~~~--~~~~~~-----~~~~~~~~~l~g~ 114 (475)
T TIGR00924 43 LGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKK-TMVLGGIVLMLGHFM--LAMSIY-----PDLIFYGLGTIAV 114 (475)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHH-HHHHHHHHHHHHHHH--HHhccc-----HhHHHHHHHHHHh
Confidence 5543 78888999999999999999999999 79995 777777666654432 223333 2344555667899
Q ss_pred hhHHhhhhhHhhHHhhccCC----chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD----TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~----~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.+...+...+++++.+|++ ++.+++.+....++|+.+++.+.+++.
T Consensus 115 g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 115 GSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred ccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999853 455899999999999999999988764
No 113
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.86 E-value=6.4e-07 Score=83.16 Aligned_cols=156 Identities=11% Similarity=0.119 Sum_probs=99.9
Q ss_pred HHHHHHhhcchhhHHHHHHHHHHHHH---HHH---HHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCC
Q 020441 126 SKSITTLLADVRMLLIIPLFAYSGLQ---QAF---VWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLP 199 (326)
Q Consensus 126 ~k~~~~~~~~~~~lll~p~~~~~g~~---~~f---~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g 199 (326)
+|+..+++|+|+...+.. +..|.. ..| +..++..-+.+...|.+..|+...+.-+.|++.-.+..++.+|+|
T Consensus 210 ~~~~~~l~k~~~fw~~~l--~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig 287 (412)
T PF01306_consen 210 LKDVLSLFKMRNFWFFVL--FVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIG 287 (412)
T ss_dssp HHHHHHHTTSHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHhcchhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 366778999999876552 233322 111 112222222233445556788888888889999999999999999
Q ss_pred ChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhh-HHHHHHH
Q 020441 200 SITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFA-QLKVWQC 277 (326)
Q Consensus 200 ~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa-~~~~~~~ 277 (326)
.|+.+++.+.+... =++ ...+.++ ++...+.-.+-|+-........--.+.+.+|++. ++.+. .+++..+
T Consensus 288 ~k~~Lllag~i~~i-Ri~--~~~~~~~-----~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 288 AKNLLLLAGVIMAI-RII--GSGFATN-----PWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQ 359 (412)
T ss_dssp HHHHHHHHHHHHHH-HHH--HHHT--S-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHH
T ss_pred hHhHHHHHHHHHHH-HHH--HHhhhcc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH
Confidence 99734433333322 221 1244454 4667777888898888888888889999999885 56777 5678888
Q ss_pred HHHHHHHHHhhhhh
Q 020441 278 ASIAVVFFIGPYIS 291 (326)
Q Consensus 278 ~g~~i~~~i~~~~~ 291 (326)
+|..+.......+.
T Consensus 360 ~~~~i~s~~~G~ly 373 (412)
T PF01306_consen 360 IGIIILSPLAGYLY 373 (412)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHhhH
Confidence 88887766666553
No 114
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.85 E-value=1.9e-07 Score=87.62 Aligned_cols=119 Identities=15% Similarity=0.218 Sum_probs=92.4
Q ss_pred cccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH
Q 020441 165 TPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL 242 (326)
Q Consensus 165 ~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 242 (326)
.+.+|. ..+|+...+..+...+.+++.|+++||+|||+ ++..+.++.....+.. .+.++ ++..++..++.
T Consensus 38 ~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~-~l~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~ 109 (400)
T PRK11646 38 VDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKP-MIVTGMLMRAAGFATM--AIAHE-----PWLLWLSCILS 109 (400)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHH
Confidence 344554 37888888889999999999999999999985 7666666655544332 22333 35567778888
Q ss_pred hhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 243 GIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 243 G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
|++.+..++...+++.+.+|++ +..+++.++...++|..+++.+...+.
T Consensus 110 g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~ 159 (400)
T PRK11646 110 GLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL 159 (400)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888899999999765 577899999999999999999887664
No 115
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.84 E-value=1.4e-07 Score=88.10 Aligned_cols=144 Identities=19% Similarity=0.063 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHH-Hh
Q 020441 145 FAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LI 221 (326)
Q Consensus 145 ~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~-~l 221 (326)
.+..+...+.....++. +..+.+|. .+++++..++.+...+++++.|++.||+|||+ ++..+.+......+.. +.
T Consensus 24 ~~~~~~~~~~~~~~l~~-~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~ 101 (399)
T PRK05122 24 TFISYLTIGLPLAVLPG-YVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKK-AVVFGLCGCALSGLLYLLA 101 (399)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcc-hHHHHHHHHHHHHHHHHHh
Confidence 33344444443333332 33444554 47899999999999999999999999999996 6666655443322111 11
Q ss_pred cccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 222 NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+.++.+..+....++..++.|++++...+....++.+.+|++ +..+.+.+......|..++..+...+
T Consensus 102 ~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l 171 (399)
T PRK05122 102 GLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLL 171 (399)
T ss_pred hhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHH
Confidence 1222111111234566778999999999888888888888765 56677777788888877777776654
No 116
>PRK12382 putative transporter; Provisional
Probab=98.80 E-value=3e-07 Score=85.72 Aligned_cols=127 Identities=18% Similarity=0.075 Sum_probs=88.4
Q ss_pred ccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHH-HHhcccCCCCCcchHHHHHHHH
Q 020441 164 VTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYSVTSGVLGTLYPLIMAA 240 (326)
Q Consensus 164 ~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~ 240 (326)
..+.+|. .+++++...+.+...+++++.|++.||+|||+ ++..+.+......+. ......+.....++...++..+
T Consensus 42 l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 120 (392)
T PRK12382 42 VHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKR-SALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRL 120 (392)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchH-HHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHH
Confidence 3445565 48899999999999999999999999999996 666665543332211 1111111110001344667778
Q ss_pred HHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 241 LLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 241 l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.|++++...+...++..+.+|++ +..+++.+....+.|..+++.+...+.
T Consensus 121 l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~ 172 (392)
T PRK12382 121 ILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLH 172 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888888888888755 566888888888888888888876553
No 117
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.79 E-value=4.4e-07 Score=82.98 Aligned_cols=117 Identities=15% Similarity=0.078 Sum_probs=88.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
.+++++..++.++..+++++.|++.||+|||+ ++..+.++........ +....++. +++..++..++.|++.+..
T Consensus 34 ~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~ 109 (365)
T TIGR00900 34 SVLSLAALAGMLPYVVLSPIAGALADRYDRKK-VMIGADLIRAVLVAVLPFVALLGGL---NIWQVYVLAGILAIAQAFF 109 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHhhchhH-HHHHHHHHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHHHHHHHHH
Confidence 47788899999999999999999999999996 6665555444332221 11211211 1356677788899999999
Q ss_pred hhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 250 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 250 ~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+..++++.+.+|++ +..+++.++....+|..+++.+...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 110 TPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999866 466888999999999999988887663
No 118
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.75 E-value=8.4e-07 Score=83.00 Aligned_cols=117 Identities=16% Similarity=0.134 Sum_probs=91.2
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. +++++....+.+...+++++.|++.||+|||+ ++..+.++.....+.. ...++ ++..++..++.|+
T Consensus 49 ~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~r~l~G~ 120 (394)
T PRK10213 49 DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRY-VVILFAVLLTLSCLLV--SFANS-----FSLLLIGRACLGL 120 (394)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHH-HHHHHHHHHHHHHHHH--HHHCh-----HHHHHHHHHHHHH
Confidence 4554 36788888899999999999999999999995 7777766665544322 22333 3667777889999
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.+...+...+++.+.+|++ +..+.+......++|..+++.+.+.+.
T Consensus 121 ~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~ 168 (394)
T PRK10213 121 ALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLG 168 (394)
T ss_pred hhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999866 466888888888888888888887664
No 119
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.75 E-value=4.1e-07 Score=85.63 Aligned_cols=118 Identities=15% Similarity=0.172 Sum_probs=91.4
Q ss_pred cccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH
Q 020441 165 TPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL 242 (326)
Q Consensus 165 ~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 242 (326)
.+.+|. .+.+++..++.++..+++++.|++.||+|||+ ++..+.++..+..... .+.++ +...++.-++.
T Consensus 35 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~r~l~ 106 (412)
T TIGR02332 35 GKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARR-WIAGIMVLWGIASTAT--MFATG-----PESLYLLRILV 106 (412)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHH-HHHHHHHHHHHHHHHH--HHhcC-----HHHHHHHHHHH
Confidence 344554 37888999999999999999999999999995 6666665555443322 23333 25567778899
Q ss_pred hhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 243 GIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 243 G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
|++.+...+....++.+.+|++ +..+.+.++...++|..+++.++..+
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 155 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI 155 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888999999965 67788899999999999998887654
No 120
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.74 E-value=6.3e-07 Score=82.86 Aligned_cols=118 Identities=18% Similarity=0.106 Sum_probs=90.4
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. ++++++...+.++..+++++.|++.||+|||+ .+..+.++.....+.. ...++ ++..++..++.|
T Consensus 33 ~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~g 104 (385)
T TIGR00710 33 ADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRP-VLLLGLFIFALSSLGL--ALSNN-----IETLLVLRFVQA 104 (385)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-HHHHHHHHHHHHHHHH--HHHcc-----HHHHHHHHHHHH
Confidence 34554 37888899999999999999999999999995 6666655544443322 22233 355667788999
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
++.+...+..++++.+.+|++ +..+++..+....+|..+++.+...+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 153 (385)
T TIGR00710 105 FGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL 153 (385)
T ss_pred cchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999866 466888888888988888888877653
No 121
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.73 E-value=1.3e-07 Score=82.22 Aligned_cols=118 Identities=19% Similarity=0.264 Sum_probs=77.5
Q ss_pred ccccccccch--hhHHH-HHHHHHHHHHHHhhhhhhccCCCChhhHHHHHH-HHHHHHHHHHHhcccCCCCCcchHHHHH
Q 020441 162 EIVTPALGVS--GVGGA-MAVYGAFDAICSLAAGRLTTGLPSITFIVSGGA-IAQVVVFLWILINYSVTSGVLGTLYPLI 237 (326)
Q Consensus 162 ~~~~~~lg~~--~~~~~-~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~-i~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (326)
++.++-.|.+ ..+-+ ..++++ ....+|++|.++||.|++. .++..+ +..+..--. +.++. +-++.
T Consensus 289 ~fF~~rfGlS~~~a~~i~s~vy~I-sav~spvfg~i~Dk~G~n~-~wv~~a~~~tl~~H~~--l~Ft~-------lsPy~ 357 (459)
T KOG4686|consen 289 MFFQKRFGLSAVSAGNILSTVYGI-SAVLSPVFGAISDKYGFNL-WWVASACILTLLGHSG--LFFTF-------LSPYT 357 (459)
T ss_pred HHHHHhhCCChhhccchhhhhhhh-hhhhhhhHHHhHhhhccee-hhHHHHHHHHHHHhhh--HHhhh-------ccHHH
Confidence 4444445554 22333 345554 4667899999999999873 443332 221111111 11211 22366
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...++|+.++...-.....++.+.||++ .++|+.-+.+|.+|-++.+.+...+
T Consensus 358 ~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i 411 (459)
T KOG4686|consen 358 SMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFI 411 (459)
T ss_pred HHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhee
Confidence 7778899999887767777788889876 8899999999999999999998766
No 122
>PRK03545 putative arabinose transporter; Provisional
Probab=98.72 E-value=8.7e-07 Score=82.60 Aligned_cols=117 Identities=14% Similarity=0.113 Sum_probs=89.5
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. +++++....+.++..+++++.|++.||+|||+ ++..+.++.....+.. .+.++ ++..++..++.|
T Consensus 37 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~r~~~G 108 (390)
T PRK03545 37 QSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRK-LLIGLFVLFIASHVLS--ALAWN-----FTVLLISRIGIA 108 (390)
T ss_pred hHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHH
Confidence 34554 47888888999999999999999999999996 7666665544443221 22333 355667778889
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+...+...+++.+.+|++ +..+++.++...++|..+++.+...+
T Consensus 109 ~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l 156 (390)
T PRK03545 109 FAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI 156 (390)
T ss_pred HHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH
Confidence 999988888899999999865 56688899999999999988887655
No 123
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.71 E-value=2.5e-07 Score=84.96 Aligned_cols=113 Identities=12% Similarity=-0.025 Sum_probs=84.0
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. +++++...++.++..+++++.|++.||+|||+ ++..+.++.....+. ....++ ++..++..++.|
T Consensus 31 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~-~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~g 102 (377)
T TIGR00890 31 RYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRA-VAMLGGILYGLGFTF--YAIADS-----LAALYLTYGLAS 102 (377)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccc-hhHHhHHHHHHHHHH--HHHHHH-----HHHHHHHHHHHh
Confidence 34554 47889999999999999999999999999995 666666555544332 122333 345566677889
Q ss_pred hhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHH
Q 020441 244 IGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFI 286 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i 286 (326)
++.+...+.....+.+.+|+++..+.+.+....++|..++..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 145 (377)
T TIGR00890 103 AGVGIAYGIALNTAVKWFPDKRGLASGIIIGGYGLGSFILSPL 145 (377)
T ss_pred HHHHHHHHhHHHHHHHHcCcccHHHHHHHHHhcchhHhHHHHH
Confidence 9999887777788888899888778888888888887664433
No 124
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.71 E-value=3.9e-07 Score=85.20 Aligned_cols=113 Identities=16% Similarity=0.055 Sum_probs=89.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
+++++....+.++..+++++.|++.||+|||+ ++..+..+.....+. ..+.|+ +...++..++.|++.+..+
T Consensus 44 ~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~-~l~~~~~l~~~~~~~--~~~a~~-----~~~ll~~r~l~Gig~~~~~ 115 (393)
T PRK09705 44 SVAALLTALPVVTMGGLALAGSWLHQHVSERR-SVAISLLLIAVGALM--RELYPQ-----SALLLSSALLGGVGIGIIQ 115 (393)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHHHhCchH-HHHHHHHHHHHHHHH--HHHCcc-----hHHHHHHHHHHHhHHHHHh
Confidence 37788888999999999999999999999995 777777666655432 234444 3456677889999999999
Q ss_pred hhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 251 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 251 ~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+..+.++.+.+|+++..+.+.+......|..++..+.+.+.
T Consensus 116 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~ 156 (393)
T PRK09705 116 AVMPSVIKRRFQQRTPLVMGLWSAALMGGGGLGAAITPWLV 156 (393)
T ss_pred hhhhHHHHHHccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999977777888888888888888888777653
No 125
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.71 E-value=1e-08 Score=94.55 Aligned_cols=253 Identities=13% Similarity=0.056 Sum_probs=131.8
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
...|.+.|+|.+..-+..-+.+.+..+ +++|++.+++|+..-..|..+|.+++..+-.... .||.
T Consensus 125 ~l~R~~vGiGeAs~~~ia~s~IaD~f~----------~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~Wr~ 189 (493)
T KOG1330|consen 125 LLCRGFVGIGEASYSPIAPSLIADSFP----------DDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WWRW 189 (493)
T ss_pred HHHHHHhccchhhhcccchhHhhhcCc----------chhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ceEE
Confidence 468999999999999999999999998 5799999999998888888888777766543221 1777
Q ss_pred hHHHHHHHHHHHH-HHHHHccCCcc-ccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHH-HHHHHHHHHH--HH
Q 020441 82 LFIVFLGVITLGT-ILMCFLRKEED-KGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPL-FAYSGLQQAF--VW 156 (326)
Q Consensus 82 ~f~~~~~i~~l~~-~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~-~~~~g~~~~f--~~ 156 (326)
-|..-.+++++.. ++.+++|.|++ +.++.+.+.+. .++.....|+++.+.++|...+-... ..+.+..-++ +.
T Consensus 190 af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~--~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~ 267 (493)
T KOG1330|consen 190 AFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKM--VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWA 267 (493)
T ss_pred EEEeehHHHHHHHHHHHhhccCcccccccccccCCcC--CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhh
Confidence 7766655565443 44567777765 22221111110 11222233445555565544332211 2222322222 11
Q ss_pred hhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCC----CChhhHH------HHHHHHHHHHHHHHHhccc
Q 020441 157 AEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGL----PSITFIV------SGGAIAQVVVFLWILINYS 224 (326)
Q Consensus 157 ~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~----g~~~~i~------~~g~i~~~~~~~~~~l~~~ 224 (326)
..+.. +.....|. +...+...+...+..+|..++|.++||+ ++-.... ..++...+.. +++....+
T Consensus 268 p~~~~-~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~-L~~~~~~~ 345 (493)
T KOG1330|consen 268 PAFIY-YSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPF-LFLFPAFT 345 (493)
T ss_pred hhHHH-HHHHHhCCccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHH-HHHHHhhh
Confidence 11100 00111121 1222334555556677888888888872 2210011 1111111111 11111122
Q ss_pred CCCCCcchHHHHHHHHHHhhhhHHhh-hhhHhhHHhhccCC-chhhhhHHHHHHHH
Q 020441 225 VTSGVLGTLYPLIMAALLGIGDGVLN-TQLSALLGILFKHD-TEGAFAQLKVWQCA 278 (326)
Q Consensus 225 ~~~~~~~~~~~~~~~~l~G~~d~~~~-~~~~~il~~~f~~~-~~~~fa~~~~~~~~ 278 (326)
.++ .....+.++.|..-...+ ....-++.+..|.+ |.++++..+....+
T Consensus 346 ~~s-----~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~ 396 (493)
T KOG1330|consen 346 SSS-----MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHI 396 (493)
T ss_pred hHH-----HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHH
Confidence 211 233444555566554443 44555666777765 67788866666533
No 126
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.70 E-value=2e-06 Score=83.53 Aligned_cols=112 Identities=11% Similarity=0.054 Sum_probs=71.4
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..++....++++...++.+.|.+..+++|.|..++++.++.....-. +...+++.. ...+...++-|++-+....
T Consensus 350 ~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~Ga-ma~~~~~n~----~~~i~~~~l~g~giG~~~~ 424 (599)
T PF06609_consen 350 EIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCGA-MAAVRPDNK----NAAIAFLVLAGFGIGGILV 424 (599)
T ss_pred eeehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHH-HHHccCCCc----chHHHHHHHHHHhHHHHHH
Confidence 45666677888888888888888766665555555665554432222 223334331 2334556667777777666
Q ss_pred hhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhh
Q 020441 252 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 252 ~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
....+..-..|++. ..+.++.-...++|++++..+..
T Consensus 425 ~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~ 462 (599)
T PF06609_consen 425 PAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYN 462 (599)
T ss_pred HHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 66666655567664 66777888888888888877764
No 127
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.69 E-value=4.5e-07 Score=85.93 Aligned_cols=113 Identities=17% Similarity=0.115 Sum_probs=86.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
..+.++...++.++..+++++.|++.||+|||+ ++..+.++.....++... .....+ .+..++..++.|++.+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~-~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~r~l~G~~~~~~ 144 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKK-SLLIIALLFVIGAILMGL-AAFALS---VEMLIVGRVLLGIGVGIA 144 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHH-HHHHHHHHHHHHHHHHHH-hccccc---hHHHHHHHHHHHhhhhHH
Confidence 346788899999999999999999999999995 666665555443332211 111111 235677788999999999
Q ss_pred hhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHh
Q 020441 250 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 250 ~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
.+...+++++.+|++ +..+.+.++....+|..+++.+.
T Consensus 145 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 145 SALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 999999999999866 56688899999999999999988
No 128
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.68 E-value=1.4e-05 Score=77.49 Aligned_cols=261 Identities=10% Similarity=-0.037 Sum_probs=135.9
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
++.|+++|++.+...+...++++|.-+ ++.|+....+ ......+...+...+.++.. +||.
T Consensus 175 ~~~Rfl~G~~~~~~~~~~~~~~~E~~~----------~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~Wr~ 235 (521)
T KOG0255|consen 175 LIFRFLSGFFGSGPLTVGFGLVAEIVS----------PKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DWRW 235 (521)
T ss_pred HHHHHHHHhhccchhHHhHhhheeecC----------cchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hHHH
Confidence 468999999999999999999999999 5689888887 66666666666666655544 5998
Q ss_pred hHHHHHHHHHHHHHHHHHcc-CCccc-----cccc--hhhhc--------hhhhhHHHHH-HHH------------HHHh
Q 020441 82 LFIVFLGVITLGTILMCFLR-KEEDK-----GEKE--TADAS--------VNFYSYLVSL-SKS------------ITTL 132 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~-~~~~~-----~~~~--~~~~~--------~~~~~~~~~~-~k~------------~~~~ 132 (326)
.+.+....+.+..++ .+++ +..+- +.++ +..++ ........+. .+. ...+
T Consensus 236 ~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 314 (521)
T KOG0255|consen 236 LFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDL 314 (521)
T ss_pred HHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhh
Confidence 787655444444444 3443 22210 0000 00000 0000001111 000 1223
Q ss_pred hcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHH
Q 020441 133 LADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ 212 (326)
Q Consensus 133 ~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~ 212 (326)
++.|++....-...+..+..+. .++...+....+|. .......+.+..+.......+...|+.|||. ....+..+.
T Consensus 315 ~~~~~l~~~~~~~~~~~~~~~~--~y~gl~~~~~~lg~-~~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~-~~~~~~~~~ 390 (521)
T KOG0255|consen 315 FRTPRLRYRTLYLLFIWFVFSL--VYYGLSLNVSGLGG-NIYLNFTLSGLVELPAYFRNGLLLPEFGRRP-PLFLSLFLA 390 (521)
T ss_pred hcCHHHHHHHHHHHHHHHHHhH--HHHhhhhhhhhcCc-hHHHHHHHHHHHHhhHHHHHHHHHHHhCcHH-HHHHHHHHH
Confidence 3333322222112222211111 12221222222332 2233345566677777777788889999884 555555444
Q ss_pred HHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 213 VVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 213 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
..+.+.. .+.++... .+...+...+-.++-+.-....+....|++|+. +..+.+..+....+|+.+++.+....
T Consensus 391 ~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~ 465 (521)
T KOG0255|consen 391 GIGLLLF--GWLPDDLG--GWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLL 465 (521)
T ss_pred HHHHHHH--HHhhccch--hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4333221 12222100 012222222222233333334488889999987 56678888888888888888776433
No 129
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.67 E-value=1.4e-06 Score=81.16 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=89.2
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. ++.++....+.++..+++++.|++.||+|||+ ++..+..+.....++ ..+.++ ++..++..++.|+
T Consensus 32 ~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~l--~~~~~~-----~~~l~~~r~l~G~ 103 (382)
T PRK10091 32 DVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKH-ILLFLVALCVIGNAM--FTLSSS-----YLMLAIGRLVSGF 103 (382)
T ss_pred HcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHH-HHHHHHHHHHHHHHH--HHHhCc-----HHHHHHHHHHHHh
Confidence 3554 36788899999999999999999999999995 766666665544332 233343 3566777889999
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.+...+....++.+.+|++ +..+++.+...+++|..+++.+...+.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 151 (382)
T PRK10091 104 PHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLS 151 (382)
T ss_pred hhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHh
Confidence 99998888888999999876 455788888888888888877766553
No 130
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.67 E-value=1.2e-06 Score=81.87 Aligned_cols=110 Identities=14% Similarity=0.127 Sum_probs=85.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
...+++...+.+...+..++.|++.||+|||+ ++..+.++.....+... ..++ + ++..++.|++.+...
T Consensus 38 ~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~-vl~~~~~~~~~~~~~~~--~~~~-----~---~~~r~l~G~~~a~~~ 106 (393)
T PRK11195 38 WSQPLLQMFFVLAYIVLAPFVGAFADSFPKGR-VMFIANGIKLLGCLLML--FGIH-----P---LLAYGLVGIGAAAYS 106 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHhhhccCCch-hhHHHHHHHHHHHHHHH--HHHH-----H---HHHHHHHHHHHHHHH
Confidence 36788888999999999999999999999996 77766665544332211 1222 1 444567899999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+...+++.+.+|++ +..+.+.......+|..+++.++..+.
T Consensus 107 pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~ 148 (393)
T PRK11195 107 PAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALA 148 (393)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999976 466888888889999999998887664
No 131
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.67 E-value=2.6e-06 Score=85.43 Aligned_cols=110 Identities=11% Similarity=-0.021 Sum_probs=83.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
...+++..++.++.+++++++|+++||+|||+ .++.+.++..+..++. .+.++ ++..++.-++.|++.+...
T Consensus 202 ~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~-~lii~lil~~i~~ll~--afa~s-----~~~llv~R~l~G~g~g~~~ 273 (742)
T TIGR01299 202 SGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQ-CLLICLSVNGFFAFFS--SFVQG-----YGFFLFCRLLSGFGIGGAI 273 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHH--HHHhh-----HHHHHHHHHHHHHHHHHHH
Confidence 36778888889999999999999999999995 6655555444333221 22333 3556677888999999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
+..++++.+.+|.+ +...++..+.+.++|..++..++.
T Consensus 274 p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~ 312 (742)
T TIGR01299 274 PIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAW 312 (742)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999976 566788888888888888776553
No 132
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.66 E-value=1.6e-06 Score=80.85 Aligned_cols=115 Identities=23% Similarity=0.185 Sum_probs=86.0
Q ss_pred ccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhh
Q 020441 168 LGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 245 (326)
Q Consensus 168 lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~ 245 (326)
+|.+ +.++...++.++..++.++.|++.||+|||+ .+..+.+...+..... ...++ ....++..++.|++
T Consensus 33 ~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~i~~~~~--~~~~~-----~~~~~~~~~l~g~~ 104 (392)
T PRK10473 33 LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKP-VAIPGAALFIIASLLC--SLAET-----SSLFLAGRFLQGIG 104 (392)
T ss_pred hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChH-HHHHHHHHHHHHHHHH--HHhCc-----HHHHHHHHHHHHhh
Confidence 4543 6788888899999999999999999999995 6666665555443322 22333 24456667888999
Q ss_pred hHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 246 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 246 d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+...+..++++.+.+|++ +..+.+.++....+|..+++.+...+
T Consensus 105 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 105 AGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred hhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988888999999999865 56688888888888888887776544
No 133
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.65 E-value=1.3e-06 Score=81.23 Aligned_cols=117 Identities=11% Similarity=-0.007 Sum_probs=89.7
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. .++++...++.+...+++++.|++.||+|||+ ++..+.++..+..+.. .+.++ ++..++..++.|
T Consensus 40 ~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G 111 (405)
T TIGR00891 40 GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRL-PMVTSIVLFSAGTLAC--GFAPG-----YITMFIARLVIG 111 (405)
T ss_pred HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHH
Confidence 34454 37788888999999999999999999999996 6666655544443221 22333 355677789999
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+...+...+++.+.+|++ +..+.+.++....+|..++..+...+
T Consensus 112 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 112 IGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred hhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999866 56688888999899998888887655
No 134
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.65 E-value=2.3e-06 Score=80.53 Aligned_cols=142 Identities=12% Similarity=0.064 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHH
Q 020441 141 IIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW 218 (326)
Q Consensus 141 l~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~ 218 (326)
+.-.++..|+..+......+ .+ ++..|. .+.+++...+.++..+++++.|++.||+|||+ .+..+.++......+
T Consensus 8 ~~~~f~~~G~~~~~~~~l~~-~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~-~~~~g~~l~~~g~~l 84 (410)
T TIGR00885 8 ITSLFALWGFANDITNPMVP-QF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKA-GILLGLFLYALGAFL 84 (410)
T ss_pred HHHHHHHHHHHHHhHHHHHH-HH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHH
Confidence 33345556666555433332 12 334454 37889999999999999999999999999995 777776665544322
Q ss_pred HH-hcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 219 IL-INYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 219 ~~-l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.. ....++ ++..++..++.|++.+..++..+..+.+..|+++ ....+..+..+++|..+++.+.+.+
T Consensus 85 ~~~~~~~~~-----~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 85 FWPAAEIMN-----YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHhhcc-----HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111122 3455667788899999999999999988888764 5578889999999999998887655
No 135
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.65 E-value=1.3e-06 Score=81.79 Aligned_cols=117 Identities=15% Similarity=0.068 Sum_probs=84.4
Q ss_pred ccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|.+ +.+.....+.++..+++++.|++.||+|||+ ++..+........+.. .+.++ ++..++..++.|
T Consensus 41 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G 112 (406)
T PRK15402 41 EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRP-VMLAGVAFFILTCLAI--LLAQS-----IEQFTLLRFLQG 112 (406)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHH--HHHcc-----HHHHHHHHHHHH
Confidence 344543 6777888899999999999999999999995 6666655544443322 22333 345666778889
Q ss_pred hhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+...+..++.+.+.+|+++ ..+.+.......+|..+++.+...+
T Consensus 113 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 160 (406)
T PRK15402 113 IGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL 160 (406)
T ss_pred hHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888899999998764 4567766666677777777776554
No 136
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.64 E-value=8.9e-07 Score=80.01 Aligned_cols=260 Identities=14% Similarity=0.071 Sum_probs=144.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchh
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTL 81 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~ 81 (326)
+.+|.+.|+.-|-+-.. -+|++|..+ |+.|++.++.+-..+++|.++|+.++-++-...+ ..+...
T Consensus 125 v~aR~l~Gi~kgnl~v~-rAiisdV~s----------ek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~---~~g~~p 190 (451)
T KOG2615|consen 125 VLARFLGGIFKGNLSVI-RAIISDVVS----------EKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSS---ISGSYP 190 (451)
T ss_pred HHHHHhhhhccCchHHH-HHHHHhhcC----------hhhccceeeeeehhhhcchhhcchhhhHHHhhHh---hhccCc
Confidence 45699999998877764 567888888 6789999999999999999999999877654111 122211
Q ss_pred hHH-HHHHH--HHH-HHHHHHHccCCcccccc--chh---hhc--hhhhhHHHHHHHHHHHhhcchhhHHH---------
Q 020441 82 LFI-VFLGV--ITL-GTILMCFLRKEEDKGEK--ETA---DAS--VNFYSYLVSLSKSITTLLADVRMLLI--------- 141 (326)
Q Consensus 82 ~f~-~~~~i--~~l-~~~l~~~l~~~~~~~~~--~~~---~~~--~~~~~~~~~~~k~~~~~~~~~~~lll--------- 141 (326)
.+. .+.++ ... -.+..+++|++.+.+++ +.. |.. ..+..++.. ......++|++....
T Consensus 191 ~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~lrn~p~~~~i~~~~i~~l 268 (451)
T KOG2615|consen 191 FALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTLQEAADDRLALLKFAR--IFKVAALRNPPLLDFISVLRIFGL 268 (451)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccchhhhhhhhhhhcchhh--hhhhhhhcCccccchHHHHHHHHH
Confidence 122 11111 112 12445677765332211 100 000 000001110 011223455433221
Q ss_pred ---HHHHHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCC-hhhHHHHHHHHHHHH
Q 020441 142 ---IPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPS-ITFIVSGGAIAQVVV 215 (326)
Q Consensus 142 ---~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~-~~~i~~~g~i~~~~~ 215 (326)
.-+.+++|++ .+.+.+-..-+|.+ +.|.+....|+...+.+....+..||.+. .+...... +..+.
T Consensus 269 ~~~ly~~l~s~~~------~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~--l~~~v 340 (451)
T KOG2615|consen 269 HYFLYLELFSGLE------NTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFS--LLLIV 340 (451)
T ss_pred HHHHHHHHHHHHH------hhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHH--HHHHH
Confidence 1112222221 11111212224443 66776777776666655555555555431 11121111 11111
Q ss_pred HHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 216 FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
-...++.+.+.+ ...+....+..+..+..-|.+..+..+..|.+ |.+..++.+...+++-++++.++...
T Consensus 341 P~~llls~~~~~-----~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i 411 (451)
T KOG2615|consen 341 PAFLLLSLARTP-----VVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVI 411 (451)
T ss_pred HHHHHHhccccc-----hhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhee
Confidence 112234555553 45677788889999999999999999999865 67788899999999999999998433
No 137
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.64 E-value=3.9e-05 Score=73.53 Aligned_cols=266 Identities=8% Similarity=-0.029 Sum_probs=135.7
Q ss_pred hhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHH
Q 020441 8 LGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFL 87 (326)
Q Consensus 8 ~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~ 87 (326)
.++|.|...+...+++.|.-|++ +++|+..+++++...+++..+|+.+...+.. ..||+..|.+..
T Consensus 110 i~iG~G~~~~~~~alv~elfp~~--------~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~------~~Gw~~~F~iaa 175 (493)
T PRK15462 110 IVCGYGLFKSNVSCLLGELYEPT--------DPRRDGGFSLMYAAGNVGSIIAPIACGYAQE------EYSWAMGFGLAA 175 (493)
T ss_pred HHHhcccccccHHHHHHHHCCCC--------CccccceehHHHHHHHHHHHHHHHHHHHHHh------hhChHHHHHHHH
Confidence 34455555555556666655532 3478889999999999999999888876643 236887787654
Q ss_pred HHHHHHHHHHHHccCCccc----cccchhhhchhh-----------------hhHHHHHHHH----------------HH
Q 020441 88 GVITLGTILMCFLRKEEDK----GEKETADASVNF-----------------YSYLVSLSKS----------------IT 130 (326)
Q Consensus 88 ~i~~l~~~l~~~l~~~~~~----~~~~~~~~~~~~-----------------~~~~~~~~k~----------------~~ 130 (326)
+.+.++.+..++.++...+ +++..++++... .....+.... +.
T Consensus 176 igm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (493)
T PRK15462 176 VGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIY 255 (493)
T ss_pred HHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444333322111 010000000000 0000000000 00
Q ss_pred -Hhh--cc-hhhHHHHHHHHHHH-----HHHHHH-Hhhccccccccc-ccch-hhHHHHHHHHHHHHHHHhhhhhhccCC
Q 020441 131 -TLL--AD-VRMLLIIPLFAYSG-----LQQAFV-WAEFTKEIVTPA-LGVS-GVGGAMAVYGAFDAICSLAAGRLTTGL 198 (326)
Q Consensus 131 -~~~--~~-~~~lll~p~~~~~g-----~~~~f~-~~~~~~~~~~~~-lg~~-~~~~~~~~~gi~~~i~~~~~G~l~d~~ 198 (326)
+.. .| +|+...+++++..- ++|+.. ...|.+....+. .|.+ -..+...+..+..++.+|+.+++=.|.
T Consensus 256 ~~~~~~~er~r~~~~~~l~~~~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l 335 (493)
T PRK15462 256 RKAENQKQRKELGLIVTLTFFSMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKES 335 (493)
T ss_pred HhcCCHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhccchhcceeeCHHHHHhHhHHHHHHHHHHHHHHHHHH
Confidence 001 12 35555554444332 222221 123333333333 3432 244556677887888888776552111
Q ss_pred ---CC--hhhH-HHHHHHHHHHHHHHHHh--cccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhh
Q 020441 199 ---PS--ITFI-VSGGAIAQVVVFLWILI--NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAF 269 (326)
Q Consensus 199 ---g~--~~~i-~~~g~i~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~f 269 (326)
+| ..+. +.+|.++..+++..+.+ ...++.....+++..+.+++.+++.-+..+.-.++.+++.|++ +...+
T Consensus 336 ~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~m 415 (493)
T PRK15462 336 VAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLT 415 (493)
T ss_pred hcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHH
Confidence 11 1112 45566655555432221 1111111123455677788999999999999999999999987 45567
Q ss_pred hHHHHH-HHHHHHHHHHHh
Q 020441 270 AQLKVW-QCASIAVVFFIG 287 (326)
Q Consensus 270 a~~~~~-~~~g~~i~~~i~ 287 (326)
+.+-+. .++|..++-.+.
T Consensus 416 g~w~l~~~~~~~~~~g~~~ 434 (493)
T PRK15462 416 GIYMLLSGAIANYLAGVIA 434 (493)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 766543 356655544443
No 138
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.63 E-value=2.2e-06 Score=82.92 Aligned_cols=115 Identities=21% Similarity=0.166 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHH-HHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
.++++.....+-..+.+++.|.+.||+.||+ +++.+-++.+... ++..+.+... ..++..++..++.|++.+..+
T Consensus 46 ~valv~~a~~LP~~Llsl~aG~laDr~drrr-ili~~~~~~~~~~~~L~~l~~~~~---~~~~~Ll~~~fl~g~~~a~~~ 121 (524)
T PF05977_consen 46 MVALVQAASTLPILLLSLFAGALADRFDRRR-ILILSQLLRALVALLLAVLAFFGL---LSPWLLLILTFLLGIGSAFFN 121 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccchH-HHHHHHHHHHHHHHHHHHHHHhCc---CCHHHHHHHHHHHHHHHHHHH
Confidence 6777778888888899999999999999996 6666655443222 2222222111 124677888999999999999
Q ss_pred hhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 251 TQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 251 ~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+..++++.++.|+++ ..+.+..+...++...+++.++..+
T Consensus 122 PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L 162 (524)
T PF05977_consen 122 PAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL 162 (524)
T ss_pred HHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH
Confidence 999999999999775 5577777777777666666666544
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.62 E-value=2e-06 Score=80.92 Aligned_cols=116 Identities=14% Similarity=0.013 Sum_probs=82.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
.+.+++...+.+...+++++.|++.||++||+ ++..+.++......... ..+.++++ ++..++..++.|++.+..
T Consensus 52 ~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~~~~~g~~~~~~ 127 (417)
T PRK10489 52 LQVGLSVTLTGGAMFIGLMVGGVLADRYDRKK-LILLARGTCGLGFIGLALNAFLPEPS---LLAIYLLGLWDGFFGSLG 127 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHhhhcCCce-EEEehHHHHHHHHHHHHHHHHcCCCc---HHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999985 55445444333222111 11111111 345566777889998888
Q ss_pred hhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 250 NTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 250 ~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+...+.+.+..|+++ ..+.+......++|..+++.+...+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 128 VTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 8888899999998664 5677788888888888888887655
No 140
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.62 E-value=1e-06 Score=81.88 Aligned_cols=113 Identities=12% Similarity=-0.030 Sum_probs=87.0
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
.++|++...+.++..+++++.|++.||+|||+ .+..+.++....... ..+.++ ++..++..++.|++.+...
T Consensus 41 ~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~-~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~l~G~~~~~~~ 112 (381)
T PRK03633 41 WQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNR-SYYLASLIFAAGCAG--LGLMVG-----FWSWLAWRFVAGIGCAMIW 112 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHH--HHHhcc-----HHHHHHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999985 666666555544322 123333 3556677889999999888
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.....+.+..|++ +..+++.++....+|..+++.+...+.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~ 154 (381)
T PRK03633 113 VVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVS 154 (381)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 87777777777654 566888999999999999999887664
No 141
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.62 E-value=1.9e-06 Score=80.54 Aligned_cols=116 Identities=18% Similarity=0.029 Sum_probs=89.1
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. ++++++...+.++..+++++.|++.||+|||+ ++..+.++.....+.. ...++ ++..++..++.|+
T Consensus 44 ~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~G~ 115 (406)
T PRK11551 44 EFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKR-ILIVSVALFGLFSLAT--AQAWD-----FPSLLVARLLTGV 115 (406)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCch-hHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHh
Confidence 3454 47889999999999999999999999999996 6666655544433221 22333 3556777889999
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.+...+...+++.+.+|++ +..+.+.+.....+|..+++.+...+
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 162 (406)
T PRK11551 116 GLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA 162 (406)
T ss_pred hHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999865 67788888888999999888877544
No 142
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.61 E-value=2.5e-06 Score=77.36 Aligned_cols=114 Identities=19% Similarity=0.200 Sum_probs=91.0
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
..+.+.+.....+...+++++.|++.||+|||+ .+..+.+......+.... .++ ++..++..++.|++.+..
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~-~~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~g~~~~~~ 104 (352)
T cd06174 33 ASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRR-VLLLGLLLFALGSLLLAF--ASS-----LWLLLVGRFLLGLGGGAL 104 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCch-hhHHHHHHHHHHHHHHHH--hcc-----HHHHHHHHHHHHcccccc
Confidence 347788889999999999999999999999996 666666665554433222 232 356677788999999999
Q ss_pred hhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 250 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 250 ~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+...+++.+.+|++ +..+++..+...++|..+++.+...+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 147 (352)
T cd06174 105 YPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLA 147 (352)
T ss_pred cHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999975 577889999999999999998887663
No 143
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.60 E-value=1.4e-06 Score=80.56 Aligned_cols=113 Identities=15% Similarity=0.169 Sum_probs=87.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
.++++...++.++..+++++.|++.||+|||+ ++..+.++........ ...++ ++..++..++.|++.+...
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~i~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~ 97 (377)
T PRK11102 26 GSVQMTLSAYILGFAIGQLFYGPMADSFGRKP-VILGGTLVFALAAVAC--ALAQT-----IDQLIYMRFLHGLAAAAAS 97 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhchHHhhcCChH-HHHHHHHHHHHHHHHH--HHHcc-----HHHHHHHHHHHHHHHHHHH
Confidence 47788888999999999999999999999985 7666666655443322 22233 3556677888999999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+...+++.+.+|++ +..+++.+.....+|..+++.+...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 139 (377)
T PRK11102 98 VVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL 139 (377)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999866 567888888888888888888876553
No 144
>TIGR00895 2A0115 benzoate transport.
Probab=98.60 E-value=7.5e-07 Score=82.44 Aligned_cols=116 Identities=19% Similarity=0.110 Sum_probs=88.7
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. .+.+++.....++..+++++.|++.||+|||+ .+..+.++.....+.. ...++ .+..++..++.|+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~ 117 (398)
T TIGR00895 46 EWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKR-VLLWSILLFSVFTLLC--ALATN-----VTQLLILRFLAGL 117 (398)
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHH-HHHHHHHHHHHHHHHH--HHccc-----hHHHHHHHHHHhc
Confidence 3454 36788888888999999999999999999985 6666665554443322 22233 2456667788999
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.+...+...+++.+.+|++ +..+++.+.....+|..++..+...+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 164 (398)
T TIGR00895 118 GLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL 164 (398)
T ss_pred ccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999865 56688899999999999888887655
No 145
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.60 E-value=1.7e-06 Score=91.58 Aligned_cols=115 Identities=14% Similarity=0.072 Sum_probs=87.2
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
..+++..++.+...+++++.|+++||+|||+ ++..+.++.....++..+ ...++ ++.+++..++.|++.+...
T Consensus 48 ~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~-~l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~l~G~~~~~~~ 121 (1146)
T PRK08633 48 LTAIVNALFLLPFLLLSSPAGFLADKFSKNR-VIRIVKLFEVGLTLLIVLAYYLGW-----FWLAFAVTFLLGAQSAIYS 121 (1146)
T ss_pred HHHHHHHHHHHHHHHHhhhHhhhcccccHHH-HHHHHHHHHHHHHHHHHHHHHHcc-----HHHHHHHHHHHHHHHHhhc
Confidence 4567778888889999999999999999995 666555443322222111 12222 3566777889999999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhhH
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISL 292 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~~ 292 (326)
+..++++.+.+|++ +..+++.+....++|..+++.++..+..
T Consensus 122 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~ 164 (1146)
T PRK08633 122 PAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE 164 (1146)
T ss_pred hHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876 5678899999999999999998876643
No 146
>PTZ00207 hypothetical protein; Provisional
Probab=98.56 E-value=4.8e-06 Score=81.18 Aligned_cols=133 Identities=9% Similarity=0.061 Sum_probs=86.2
Q ss_pred HHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc
Q 020441 154 FVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG 231 (326)
Q Consensus 154 f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~ 231 (326)
|.++.+.+.+ .+.+|.+ +++.+..+ +.....+.++.|++.||+|+|+ ++..+.++..+..++..+.....- ...
T Consensus 44 y~fsv~s~~L-~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R~-vllig~ll~~iG~ll~ala~~~~i-~~s 119 (591)
T PTZ00207 44 YAFNLISGAM-QARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPRP-IFVLSMTVFCLGTLLFALTFQEVI-EGS 119 (591)
T ss_pred HHHHHHHHHH-HHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHhcccc-cCc
Confidence 3444544432 3345543 44554443 3344456667899999999995 777787776655543333211100 001
Q ss_pred hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHH-HHHHhhhh
Q 020441 232 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAV-VFFIGPYI 290 (326)
Q Consensus 232 ~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i-~~~i~~~~ 290 (326)
.+..++..++.|++.+..++.....+.+.||++|..+.++.+...++|+++ +.....++
T Consensus 120 ~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~ 179 (591)
T PTZ00207 120 VVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFF 179 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566677889999988888888899999988888999999999999985 44444443
No 147
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.56 E-value=1e-06 Score=82.34 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=77.6
Q ss_pred cccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHH-HHhcccCCCCCcchHHHHHHH
Q 020441 163 IVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLW-ILINYSVTSGVLGTLYPLIMA 239 (326)
Q Consensus 163 ~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~ 239 (326)
+.++.+|. .+++.+..++.++..+++++.|+++||+|||+ .+..+.+..+..... ..+...+..........++..
T Consensus 28 ~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (396)
T TIGR00882 28 WLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKK-HLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGG 106 (396)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 44444454 47899999999999999999999999999996 544443332222211 111112110000011223445
Q ss_pred HHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 240 ALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 240 ~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.|++++...+.......+.-++ +...++..+...++|.++++.+...+
T Consensus 107 ~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~g~~~g~~~~g~l 156 (396)
T TIGR00882 107 LYLGFVFSAGAGAIEAYIEKVSRN-SNFEYGKARMFGCVGWALCASIAGIL 156 (396)
T ss_pred HHHHHHhccchhhHHHHHHHhhhh-cccccchhhhhcccHHHHHHHHHhhh
Confidence 667777777777666665553332 23367888888899999998888755
No 148
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.56 E-value=5.6e-06 Score=78.45 Aligned_cols=116 Identities=15% Similarity=0.128 Sum_probs=87.7
Q ss_pred cccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|.+ +.++....+.++..+++++.|++.||+|||+ ++..+.++.....++ ..+.++ ++..++..++.|+
T Consensus 52 ~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~-~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~l~g~ 123 (434)
T PRK11663 52 DLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARY-FMGIGLIATGIINIL--FGFSSS-----LWAFALLWVLNAF 123 (434)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCch-hHHHHHHHHHHHHHH--HHHHhH-----HHHHHHHHHHHHH
Confidence 35554 7788889999999999999999999999995 666666555444332 223333 2445555667788
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.+...+...+++.+.+|++ +..+.+.++..+++|..++..+...+
T Consensus 124 ~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l 170 (434)
T PRK11663 124 FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI 170 (434)
T ss_pred HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88887888889999999865 57788999999999999988777655
No 149
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.55 E-value=4.9e-06 Score=78.91 Aligned_cols=145 Identities=11% Similarity=0.072 Sum_probs=94.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHH
Q 020441 137 RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVV 214 (326)
Q Consensus 137 ~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~ 214 (326)
|.+.+..+.+..++..=+.++.....+....+|.+ +.++...+..++..++.+..|++.||+|+|+ ++..+..+..+
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~-v~~~~~ll~~i 112 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRR-WTVFSTAILII 112 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHH
Confidence 44555555555666555555544333333345554 7888888899999999999999999999885 55555444332
Q ss_pred HHHHHHhc---ccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 215 VFLWILIN---YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 215 ~~~~~~l~---~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
...+.... ..++ +...+++.+++|++ +.........+.+.||++ +..+.+++.....+|..++..+.+
T Consensus 113 ~~~~~~~a~~~~~~s-----~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p 184 (462)
T PRK15034 113 PCVWLGIAVQNPNTP-----FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAP 184 (462)
T ss_pred HHHHHHHHHcccCCC-----HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHH
Confidence 22221111 1122 46678888999998 556677788899999976 567888776666666665555554
No 150
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.55 E-value=8.7e-07 Score=69.13 Aligned_cols=106 Identities=17% Similarity=0.103 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhH
Q 020441 178 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 257 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il 257 (326)
..++++..+++++.|++.||++||+ .+..+........+.. ...++ .+...+..++.|++.+...+..+...
T Consensus 5 ~~~~~~~~~~~~~~g~~~d~~g~~~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~ 76 (141)
T TIGR00880 5 AGYALGQLIYSPLSGLLTDRFGRKP-VLLVGLFIFVLSTAMF--ALSSN-----ITVLIIARFLQGFGAAFALVAGAALI 76 (141)
T ss_pred EeehhHHHHHHhhHHHHHhhcchhH-HHHHHHHHHHHHHHHH--HHhcc-----HHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 3456678889999999999999985 5555554444333221 22222 35566778899999999999999999
Q ss_pred HhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 258 GILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 258 ~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+.+|++ +..+.+.++....+|..+++.+...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 111 (141)
T TIGR00880 77 ADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLA 111 (141)
T ss_pred HHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh
Confidence 9999876 566888899999999999888887664
No 151
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.54 E-value=5.3e-06 Score=76.47 Aligned_cols=121 Identities=10% Similarity=0.005 Sum_probs=80.4
Q ss_pred ccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHH
Q 020441 164 VTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAAL 241 (326)
Q Consensus 164 ~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l 241 (326)
..+.+|.+ +++++..++.+...+.+++.|++.||+|||+.++..+.......... ..+.++ ++..++..++
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~~ 96 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLL--FAWNRN-----YFLLLVLGVL 96 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHH--HHhcch-----HHHHHHHHHH
Confidence 34455654 78888899999999999999999999998853343343333322222 123333 2444555666
Q ss_pred HhhhhHHhhhhhHhhHHhhccCCc-hhh--hhHHHHHHHHHHHHHHHHhhhhh
Q 020441 242 LGIGDGVLNTQLSALLGILFKHDT-EGA--FAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 242 ~G~~d~~~~~~~~~il~~~f~~~~-~~~--fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.|.+.+...+...++..+..|+++ ..+ .+..+...++|..+++.+...+.
T Consensus 97 ~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~ 149 (375)
T TIGR00899 97 LSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLA 149 (375)
T ss_pred HHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHH
Confidence 777777777777788777776553 322 45777778888888888876653
No 152
>PRK10133 L-fucose transporter; Provisional
Probab=98.54 E-value=8.4e-06 Score=77.43 Aligned_cols=118 Identities=13% Similarity=0.084 Sum_probs=89.1
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCCCcchHHHHHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSGVLGTLYPLIMAAL 241 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~l 241 (326)
++.+|.+ +.++....+.++..+++++.|++.||+|||+ ++..+.++.....+... ....++ +...++..++
T Consensus 53 ~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~-~l~~g~~~~~~~~~l~~~~~~a~~-----~~~ll~~r~l 126 (438)
T PRK10133 53 QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKA-GIITGLFLYALGAALFWPAAEIMN-----YTLFLVGLFI 126 (438)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHH
Confidence 4445544 7889999999999999999999999999995 77777766665443211 122333 3556677788
Q ss_pred HhhhhHHhhhhhHhhHHhhccCCch-hhhhHHHHHHHHHHHHHHHHhh
Q 020441 242 LGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 242 ~G~~d~~~~~~~~~il~~~f~~~~~-~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
.|++.+..++..+.++.+..|+++. ...+.++...++|..+++.+..
T Consensus 127 ~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~ 174 (438)
T PRK10133 127 IAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQ 174 (438)
T ss_pred HHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887665543 3577889999999999988764
No 153
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.53 E-value=9.2e-06 Score=76.51 Aligned_cols=112 Identities=12% Similarity=0.027 Sum_probs=82.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..+....++.++..++.++.|.++||+|||+ ++..+........+.. ...++ ....++.-++.|++.+...+
T Consensus 52 ~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~--~~a~~-----~~~l~~~r~l~Gi~~~~~~~ 123 (413)
T PRK15403 52 LAPASVSLYLAGGMALQWLLGPLSDRIGRRP-VLITGALIFTLACAAT--LFTTS-----MTQFLIARFIQGTSICFIAT 123 (413)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHcCchH-HHHHHHHHHHHHHHHH--HHcCC-----HHHHHHHHHHHHHHHHHHHH
Confidence 5666777888889999999999999999995 7666665555443322 23333 34556667888988887667
Q ss_pred hhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 252 QLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 252 ~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
..+.++.+.+|+++ ..+.+.+.....+|..+++.++..+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~ 164 (413)
T PRK15403 124 VGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM 164 (413)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788889998764 55788888888888888888876553
No 154
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.53 E-value=5.1e-06 Score=76.34 Aligned_cols=112 Identities=17% Similarity=0.053 Sum_probs=85.4
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
.++.++....+.++..+++++.|++.||+|||+ .+..+.+........ . ..++ ++..++..++.|++.+..
T Consensus 34 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~--~-~~~~-----~~~l~~~~~~~g~g~~~~ 104 (355)
T TIGR00896 34 FSVAGLLTALPVLCFAVLAPLAPWLARRFGEER-SVAAGLLLIAAGILI--R-SAPG-----TALLFAGTALIGVGIAII 104 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchH-HHHHHHHHHHHHHHH--H-Hhcc-----HHHHHHHHHHHHHHHHHH
Confidence 346788888999999999999999999999995 666665554433322 1 2233 245566678889999888
Q ss_pred hhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 250 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 250 ~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+..+.+..+.+|+++..+.+.++..+.+|..++..+...+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l 145 (355)
T TIGR00896 105 NVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPL 145 (355)
T ss_pred hccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999987777788899999999998888776554
No 155
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.52 E-value=2.3e-06 Score=81.93 Aligned_cols=117 Identities=19% Similarity=0.129 Sum_probs=90.9
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. ++.+++...+.++..++.++.|++.||+|||+ .+..+.++.....+. ....++ +...++..++.|+
T Consensus 31 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~~~G~ 102 (485)
T TIGR00711 31 DLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRR-LFLISTFAFTLGSLL--CGVAPN-----LELMIIFRVIQGF 102 (485)
T ss_pred hcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHH-HHHHHHHHHHHHHHH--HhCcCC-----HHHHHHHHHHHHh
Confidence 3454 36788899999999999999999999999995 666666655544332 223333 3556677788999
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.+...+..++++.+.+|++ +..+++.+.....+|..+++.+...+.
T Consensus 103 ~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~ 150 (485)
T TIGR00711 103 GGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWII 150 (485)
T ss_pred hhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhc
Confidence 99999999999999999865 566888999999999998888877653
No 156
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.51 E-value=4.2e-06 Score=76.89 Aligned_cols=118 Identities=19% Similarity=0.293 Sum_probs=84.1
Q ss_pred ccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCcchHHHHHHHH
Q 020441 164 VTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVLGTLYPLIMAA 240 (326)
Q Consensus 164 ~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~ 240 (326)
..+.+|.+ +.+++...+.++..+++++.|++.||+|||+ .+..+.++..+..+.. .+.+ + ++..++..+
T Consensus 28 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~i~~~~~--~~~~~~-----~~~~~~~~~ 99 (366)
T TIGR00886 28 IKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRY-TTTLSLLLLAIPCLWA--GLAVQS-----YSVLLLLRL 99 (366)
T ss_pred HHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHH--HHHhhh-----HHHHHHHHH
Confidence 44456654 7788889999999999999999999999995 6666666555443322 2222 3 355566677
Q ss_pred HHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 241 LLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 241 l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.|++.+.+ .....++++.+|++ +..+.+.+.....+|..++..+.+.+
T Consensus 100 ~~g~~~~~~-~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l 149 (366)
T TIGR00886 100 FIGIAGGSF-ASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI 149 (366)
T ss_pred HHHHhchhh-HhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 888886655 45677888999865 56678888877778877777776544
No 157
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.51 E-value=7.1e-06 Score=76.49 Aligned_cols=117 Identities=20% Similarity=0.181 Sum_probs=83.8
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. .+.++....+.+...+++++.|+++||+|||+ .+..+........+.. ...++ .+..++..++.|
T Consensus 36 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~~~g 107 (394)
T PRK11652 36 RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRP-VILVGMSIFILGTLVA--LFAHS-----LTVLIAASAIQG 107 (394)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChH-HHHHHHHHHHHHHHHH--HHHcc-----HHHHHHHHHHHH
Confidence 34454 37788889999999999999999999999995 6666655544433221 22233 345566678889
Q ss_pred hhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+...+....+..+.+++++ ..+.+.++....++..+++.+...+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 155 (394)
T PRK11652 108 LGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLL 155 (394)
T ss_pred hhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9888877777788888887653 5567777888887777777776554
No 158
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.50 E-value=8.4e-06 Score=77.73 Aligned_cols=122 Identities=15% Similarity=0.140 Sum_probs=81.4
Q ss_pred cccch--hhHHHHHHHHHHHHHHHhhhhhhcc----CCCChhhHHHHHHHHHHHHHHHHHhcccCCCC--------Ccc-
Q 020441 167 ALGVS--GVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSVTSG--------VLG- 231 (326)
Q Consensus 167 ~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d----~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~--------~~~- 231 (326)
.+|.+ ..+.+..+..+...+..|+.|+++| |+|||++.++.+.+.....+.+ +.+.++.. -..
T Consensus 33 ~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~l--l~~~~~~~~~~~~~~~~~~~ 110 (477)
T TIGR01301 33 ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVIL--IGFAADIGHLFGDNLDKKTK 110 (477)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHH--HHhCchhhhhccccccccch
Confidence 35554 7788899999999999999999999 5999975555455544443322 22222100 000
Q ss_pred h---HHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc---hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 232 T---LYPLIMAALLGIGDGVLNTQLSALLGILFKHDT---EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 232 ~---~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~---~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
. ....+...++.++....++...++++++.|+++ +.+++..+...++|+.+++.+..+.
T Consensus 111 ~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~ 175 (477)
T TIGR01301 111 PRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYS 175 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 112222334455666777888999999999763 3488899999999999999887543
No 159
>PRK10504 putative transporter; Provisional
Probab=98.50 E-value=5.9e-06 Score=78.98 Aligned_cols=117 Identities=15% Similarity=0.073 Sum_probs=87.4
Q ss_pred cccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|.+ +.+++...+.++..++.++.|++.||+|||+ ++..+.++.....+.. ...++ ++..++..++.|+
T Consensus 39 ~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~g~ 110 (471)
T PRK10504 39 SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRN-IFFTAIVLFTLGSLFC--ALSGT-----LNELLLARVLQGV 110 (471)
T ss_pred HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHH-HHHHHHHHHHHHHHHH--HHhCC-----HHHHHHHHHHHHh
Confidence 35554 5677778888888999999999999999985 6655554444333221 22333 3455667789999
Q ss_pred hhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.+...+...+.+.+.+|+++ ..+++.++...++|..+++.+...+.
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~ 158 (471)
T PRK10504 111 GGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLV 158 (471)
T ss_pred hhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 999999999999999998764 66888999999999999888876553
No 160
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.49 E-value=1.6e-06 Score=79.90 Aligned_cols=112 Identities=11% Similarity=0.031 Sum_probs=87.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
.+++++...+.++..+++++.|++.||+|||+ .+..+.++........ .+.++ ++..++..++.|++.+...
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~l~g~~~~~~~ 100 (399)
T TIGR00893 29 AQYGYVFSAFSWGYVVGQFPGGWLLDRFGARK-TLAVFIVIWGVFTGLQ--AFAGA-----YVSLYILRVLLGAAEAPFF 100 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHhHHHHHHhcCcce-eeHHHHHHHHHHHHHH--HHHcC-----HHHHHHHHHHHHHHHHhhh
Confidence 36788899999999999999999999999995 6555655544333221 22233 3566777889999999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+..+.++.+.+|++ +..+++.++...++|..+++.+...+
T Consensus 101 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 141 (399)
T TIGR00893 101 PGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWI 141 (399)
T ss_pred hHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 99999999999865 56788899999999999988887654
No 161
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.47 E-value=1.1e-07 Score=87.74 Aligned_cols=293 Identities=13% Similarity=0.068 Sum_probs=146.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcC-CCCC------
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKD-DKGG------ 74 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~-~~~~------ 74 (326)
..-|.++|+|.|+.+.-..++.+|.++ +.+||.+.+..++....+...|++++..+..- +...
T Consensus 148 ~~~R~~LGiGIGGDYPlSAtI~SE~an----------~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~ 217 (538)
T KOG0252|consen 148 CFFRFLLGIGIGGDYPLSATIMSESAN----------KKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTY 217 (538)
T ss_pred HHHHHHhhccccCCCcchHHHhhhhhh----------hccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCc
Confidence 346899999999999999999999999 46999999999999999999999998876541 1000
Q ss_pred --CCCCchhhHHHHHHHHHHHHHHHHHccCCcccccc-------c-------hhhh---------c-hhhhhHHHHHHHH
Q 020441 75 --STSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEK-------E-------TADA---------S-VNFYSYLVSLSKS 128 (326)
Q Consensus 75 --~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~-------~-------~~~~---------~-~~~~~~~~~~~k~ 128 (326)
.+--||+.+. ++++-.++.++-|-..+|++. + .+++ + ....++.++..+.
T Consensus 218 ~~ld~vWRl~~g----lg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (538)
T KOG0252|consen 218 PHLDGVWRIIFG----LGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGL 293 (538)
T ss_pred hHHHHHHHHHHH----HHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccch
Confidence 1123897654 344433333333322232211 0 0000 0 0000111122222
Q ss_pred HHHhhcch--hhHHHHHHHHHHHHHHHHHHhhcccccccccccch----------hhHHHHHHHHHHHHH-HHhhhhhhc
Q 020441 129 ITTLLADV--RMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS----------GVGGAMAVYGAFDAI-CSLAAGRLT 195 (326)
Q Consensus 129 ~~~~~~~~--~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~----------~~~~~~~~~gi~~~i-~~~~~G~l~ 195 (326)
..+.+..| |.+ +........+-.+|+......+.+-..+|.. .+.....+-+++..+ |-++...+.
T Consensus 294 F~~~f~~~hg~~L-lgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~i 372 (538)
T KOG0252|consen 294 FSRLFLRWHGKHL-LGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFI 372 (538)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEe
Confidence 22333333 322 2222333334445543111111111112211 111222222222222 455556778
Q ss_pred cCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh-hhHHhhhhhHhhHHhhccCC-chhhhhHHH
Q 020441 196 TGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI-GDGVLNTQLSALLGILFKHD-TEGAFAQLK 273 (326)
Q Consensus 196 d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~-~d~~~~~~~~~il~~~f~~~-~~~~fa~~~ 273 (326)
|++||+. +-+.|+++..+.+.. +..+.+..... ...++++.+..+ +.-.=++....+-+|.||.+ |....++.-
T Consensus 373 d~iGRk~-iq~~GF~~~~i~~~~--~~~~y~~~~~~-~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsA 448 (538)
T KOG0252|consen 373 DIIGRKY-IQLMGFFIMTIFFFV--IAGPYNQLENT-IGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISA 448 (538)
T ss_pred ehhhhHH-HHHhhHHHHHHHHHH--HcCCccccccc-CceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHH
Confidence 9999994 777777766554432 22222211001 122333332222 33344566667888999987 555555555
Q ss_pred HHHHHHHHHHHHHhhhhh---------HHHHHHHHHHHHHHHHHHHHHH
Q 020441 274 VWQCASIAVVFFIGPYIS---------LQAMLIVMVVGICVALVGILFL 313 (326)
Q Consensus 274 ~~~~~g~~i~~~i~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 313 (326)
..--+|+.++......+. .....++..+..+++.+..+.+
T Consensus 449 A~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 449 ASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred HhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 555555555544443332 2334455555555555544433
No 162
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.46 E-value=4.9e-06 Score=78.36 Aligned_cols=117 Identities=11% Similarity=-0.046 Sum_probs=88.1
Q ss_pred ccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|.+ +.++...++.++..+++++.|++.||+|||+ ++..+.+......... .+.++ .+..++..++.|
T Consensus 46 ~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~--~~~~~-----~~~l~~~r~l~G 117 (426)
T PRK12307 46 ADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKP-LMMWSIVAYSVGTGLS--GLASG-----VIMLTLSRFIVG 117 (426)
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHHH--HHHhH-----HHHHHHHHHHHH
Confidence 344543 6788888899999999999999999999995 6666665555433221 22232 355677788999
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+...+....++.+.+|++ +..+.+.+....++|..++..+.+.+
T Consensus 118 ~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l 165 (426)
T PRK12307 118 MGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF 165 (426)
T ss_pred HHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999976 56678888888888888887776544
No 163
>PRK03699 putative transporter; Provisional
Probab=98.46 E-value=9.1e-06 Score=75.91 Aligned_cols=116 Identities=12% Similarity=0.099 Sum_probs=83.0
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. ++.++....+.++..+++++.|++.||+|||+ ++..+.++......+. ...++ ++..++..++.|+
T Consensus 36 ~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~-~~~~~~~~~~i~~~l~--~~~~~-----~~~~~~~~~l~G~ 107 (394)
T PRK03699 36 YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR-QLIFGFALMILAVAGL--MFSHS-----LALFSIAMFVLGV 107 (394)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHHHHHHHHHHHHH--HHcch-----HHHHHHHHHHHHH
Confidence 3454 47788888899999999999999999999996 6666655544433222 22333 3455667788899
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.+...+...+.+.+.+|++ +..+.+..+...++|..+++.+...+
T Consensus 108 ~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 108 VSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred hhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888889999999876 45566666667777777776665433
No 164
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.45 E-value=5.5e-06 Score=77.65 Aligned_cols=115 Identities=14% Similarity=0.139 Sum_probs=80.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHH-HhcccCCCCCcchHHHHHHHHHHhhhhHH
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI-LINYSVTSGVLGTLYPLIMAALLGIGDGV 248 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~l~G~~d~~ 248 (326)
..+.+.....++++..+++++.|++.||+|||+ ++..+..+........ .......+ ++..++..++.|++.+.
T Consensus 47 ~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~-~l~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~i~G~g~~~ 121 (402)
T TIGR00897 47 PQQSASAFTLYGIAAAISAWISGVVAEIIGPLK-TMMIGLLLWCVGHAAFIVFGLGHAN----YPLILLFYGIRGLGYPL 121 (402)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHH-HHHHHHHHHHHHHHHHHHHhccCcc----HHHHHHHHHHHHcchHH
Confidence 347899999999999999999999999999996 6666655544433221 11221111 24456667778888877
Q ss_pred hhhhhHhhHHhhccCC-chhhhhHHHHHHHHHH-HHHHHHhhh
Q 020441 249 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASI-AVVFFIGPY 289 (326)
Q Consensus 249 ~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~-~i~~~i~~~ 289 (326)
........+.+.+|++ +..+.+.++...++|. .+++.+...
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~ 164 (402)
T TIGR00897 122 FAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSY 164 (402)
T ss_pred HHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7666677777877755 5678888888888886 456666543
No 165
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.45 E-value=1.1e-05 Score=77.97 Aligned_cols=118 Identities=18% Similarity=0.138 Sum_probs=88.3
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. ++.+++...+.++...+.++.|+++||+|||+ ++..+.++.....+. ....++ ++..++..++.|
T Consensus 34 ~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~-~l~~~~~~~~~~~~~--~~~a~~-----~~~li~~r~l~G 105 (495)
T PRK14995 34 MTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKR-LLMLGGTLFGLASLA--AAFSPT-----ASWLIATRALLA 105 (495)
T ss_pred HHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHH--HHHcCC-----HHHHHHHHHHHH
Confidence 34554 36788888999999999999999999999995 776666655544332 223333 355666778899
Q ss_pred hhhHHhhhhhHhhHHhhcc-CC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 244 IGDGVLNTQLSALLGILFK-HD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~-~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
++.+...+....++.+.++ ++ +..+++.+.....+|..+++.+...+.
T Consensus 106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999988888888877774 33 466888999999999999998887664
No 166
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.45 E-value=1.5e-05 Score=75.96 Aligned_cols=112 Identities=12% Similarity=0.082 Sum_probs=78.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
..+.++....+.++.++++++.|++.||+|||+ ++..+.++..+..+...+....+++ ....++..++.|++.+..
T Consensus 62 ~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~-~l~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~l~gi~~g~~ 137 (452)
T PRK11273 62 RGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILAAAVMLFMGFVPWATSS---IAVMFVLLFLCGWFQGMG 137 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhccCCch-hHHHHHHHHHHHHHHHHhhhccccc---HHHHHHHHHHHHHHHhcc
Confidence 347888899999999999999999999999995 6666665544433221111111111 244566677889988887
Q ss_pred hhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHH-HHH
Q 020441 250 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAV-VFF 285 (326)
Q Consensus 250 ~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i-~~~ 285 (326)
.+.....+.+.+|++ +..+.+.++....+|.++ ++.
T Consensus 138 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l 175 (452)
T PRK11273 138 WPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLL 175 (452)
T ss_pred chHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 777777888888866 567888888888887643 444
No 167
>PRK11043 putative transporter; Provisional
Probab=98.45 E-value=1.5e-05 Score=74.59 Aligned_cols=117 Identities=16% Similarity=0.146 Sum_probs=83.9
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
+.+|. +++++...++.++..+++++.|++.||+|||+ ++..+..+..+.... ..+.++ .+..++..++.|
T Consensus 34 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~l~G 105 (401)
T PRK11043 34 ADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKP-VLLAGLSLFALGSLG--MLWVES-----AAQLLVLRFVQA 105 (401)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcH-HHHHHHHHHHHHHHH--HHHhcC-----HHHHHHHHHHHH
Confidence 34454 47888889999999999999999999999995 666665554433322 123333 344566667888
Q ss_pred hhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+.......+++.+.+|+++ ...++.......+|..+++.+...+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l 153 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL 153 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877777777788899998764 4567777777777888877777655
No 168
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.45 E-value=7.6e-06 Score=75.64 Aligned_cols=238 Identities=14% Similarity=0.061 Sum_probs=121.4
Q ss_pred cchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHH---HHHHccCCccc-cccchhhhc
Q 020441 40 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTI---LMCFLRKEEDK-GEKETADAS 115 (326)
Q Consensus 40 ~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~---l~~~l~~~~~~-~~~~~~~~~ 115 (326)
++|.....+=....++|..+|+++...+..+.++.+++.|. .+..+..+.+++.+ +..+.+++++. ++...++++
T Consensus 172 ~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~-~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~~ 250 (480)
T KOG2563|consen 172 DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWL-FFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAAL 250 (480)
T ss_pred chhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhhh
Confidence 45665555544455677777777777665544333334443 22233334444432 22333332221 221111111
Q ss_pred hhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHH-hhcccccccccccch--hhHHHHHHHHHHHHHHHhhhh
Q 020441 116 VNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW-AEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAG 192 (326)
Q Consensus 116 ~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~-~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G 192 (326)
++.++ .+++.++++|++.++++ +.|.+-.-.|+. ..... ..-+.-|.. ..|+...+.-++.++++.+.|
T Consensus 251 --~~~~f---~~si~~~~~n~~F~il~--~~ygi~~g~F~~l~~~l~-~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~g 322 (480)
T KOG2563|consen 251 --QDASF---PKSIKSCFKNRQFIILA--ICYGIGLGLFNSLSTLLN-LALCPSGYEGVFAGYIGALMIVAGMLGALASG 322 (480)
T ss_pred --hcCcH---HHHHHHHHcCccHHHHH--HHHhhhHHHHHHHHHHhh-hccccccCCccccchhHHHHHHHHHHHHHHHH
Confidence 11223 45666788999987765 344332223331 11111 011111222 455666666666788999999
Q ss_pred hhccCCCChhhHHHHHHHHHHHH-HHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhh-ccCCchhhhh
Q 020441 193 RLTTGLPSITFIVSGGAIAQVVV-FLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGIL-FKHDTEGAFA 270 (326)
Q Consensus 193 ~l~d~~g~~~~i~~~g~i~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~-f~~~~~~~fa 270 (326)
.+.||.+..+-....-....... ..+..+...+. +.+..+....++|++-....+.-..+-.|. ||..++...+
T Consensus 323 ii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~----~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsG 398 (480)
T KOG2563|consen 323 IIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLG----DSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSG 398 (480)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCC----ceEehhhhHHHHHHhhcCCCCcceeeeeeeccccCCcccce
Confidence 99999765432222222221111 11111111111 124567777888988888888766666666 6776655566
Q ss_pred -HHHHHHHHHHHHHHHHhhhh
Q 020441 271 -QLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 271 -~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.-+.|.-+..+.++.....
T Consensus 399 ll~~~gq~f~~~~~~~~~~~~ 419 (480)
T KOG2563|consen 399 LLNLSGQIFGVILVFIMGILA 419 (480)
T ss_pred eEEeehhHHHHHHHHHHHHHh
Confidence 55566777777777766444
No 169
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.44 E-value=2e-05 Score=74.68 Aligned_cols=265 Identities=16% Similarity=0.171 Sum_probs=139.5
Q ss_pred hhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHH
Q 020441 9 GFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLG 88 (326)
Q Consensus 9 G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~ 88 (326)
-+|.+.--+..-+.++|.+.++ ++.+|...+..|.....|.++|..++-.+.... +.+..|.+...
T Consensus 97 ~~g~a~~DV~aDa~vvE~~~~~--------p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~------~~~~~f~i~~~ 162 (433)
T PF03092_consen 97 SFGYAFADVAADALVVELARRE--------PESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF------GPQGVFLISAA 162 (433)
T ss_pred HHHHHHHHHhhhHHHHHHhhcC--------CchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC------CCeEEehHHHH
Confidence 3344444444455555666544 555899999999999999999988875544322 23444555554
Q ss_pred HHHHHHHHHHHccCCccccccch-----hhhchhhhhHHHHHHHHHHHhhcchhhHHHHH-HHHHHHHHHHHHHh-hccc
Q 020441 89 VITLGTILMCFLRKEEDKGEKET-----ADASVNFYSYLVSLSKSITTLLADVRMLLIIP-LFAYSGLQQAFVWA-EFTK 161 (326)
Q Consensus 89 i~~l~~~l~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p-~~~~~g~~~~f~~~-~~~~ 161 (326)
+..+..+..+++.+..++++.++ ++.........++..++.++.++++......- ..+........-.+ .+
T Consensus 163 ~~~l~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~f-- 240 (433)
T PF03092_consen 163 LPLLMLIVALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSF-- 240 (433)
T ss_pred HHHHHHHHHHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEE--
Confidence 55555555555543222211110 11111112237888888888888876654332 11111111111011 11
Q ss_pred cccccccc---ch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-h--cccCCCCCcchH
Q 020441 162 EIVTPALG---VS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-I--NYSVTSGVLGTL 233 (326)
Q Consensus 162 ~~~~~~lg---~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l--~~~~~~~~~~~~ 233 (326)
-+.+..++ .+ ..+....+..++..++..+..+...+..-|+ ++....++.....++-. + .++-+-...|.+
T Consensus 241 y~~~~~~~gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~-~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~ 319 (433)
T PF03092_consen 241 YFQTDALGGPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRR-IFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQW 319 (433)
T ss_pred EEEeccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH-HHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeE
Confidence 02233333 33 4566667777777888888877765555443 54444443332221101 1 111110001112
Q ss_pred HHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 234 YPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 234 ~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
..+.-.++..+....-......+.+++-|+.. .+.||..-...++|..++-.++..+
T Consensus 320 f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l 377 (433)
T PF03092_consen 320 FALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFL 377 (433)
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334555666666666777788999999875 4577776666666666666666544
No 170
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.42 E-value=1e-05 Score=85.90 Aligned_cols=112 Identities=19% Similarity=0.083 Sum_probs=84.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHH---HHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHH
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSG---GAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 248 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~---g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~ 248 (326)
.++++..++.+...+.+++.|+++||++||+ ++.. ..+......... ...++ ++..++..++.|++.+.
T Consensus 53 ~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~-~~~~~~~~~~~~~~~~~~~--~~~~s-----~~~l~~~~~l~gi~~a~ 124 (1140)
T PRK06814 53 LVTLAGAVFILPFFIFSALAGQLADKYDKAK-LAKILKFAEIGIAALAIYG--FHLNS-----VPLLFAALFLMGIHSAL 124 (1140)
T ss_pred HHHHHHHHHHHHHHHHhhhHHhhhhhccHHH-HHHHHHHHHHHHHHHHHHH--HHHhh-----HHHHHHHHHHHHHHHHh
Confidence 5677788888999999999999999999985 5322 111111111111 12233 36678888999999999
Q ss_pred hhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 249 LNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 249 ~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+.+..++++.+.+|+++ ..+.+......++|..+++.++..+.
T Consensus 125 ~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~ 168 (1140)
T PRK06814 125 FGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLAT 168 (1140)
T ss_pred hchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998764 66899999999999999999998774
No 171
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.41 E-value=1.6e-05 Score=75.35 Aligned_cols=114 Identities=10% Similarity=0.056 Sum_probs=81.6
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhc-ccCCCCCcchHHHHHHHHHHhhhhHH
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN-YSVTSGVLGTLYPLIMAALLGIGDGV 248 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~l~G~~d~~ 248 (326)
.++.++...++.++..+++++.|++.||+|||+ .+..+.++.....+..... ...++ ....++..++.|++.+.
T Consensus 60 ~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~l~~~~~l~g~~~g~ 134 (438)
T TIGR00712 60 KGELGFALSAISIAYGFSKFIMGSVSDRSNPRV-FLPAGLILSAAVMLLMGFVPWATSS----IAIMFVLLFLNGWFQGM 134 (438)
T ss_pred HhHhHHHHHHHHHHHHHhhhccchhhhccCCce-ehHHHHHHHHHHHHHHhccccccch----HHHHHHHHHHHHHHhhc
Confidence 347888899999999999999999999999985 6556655554443221111 11111 23345556778888888
Q ss_pred hhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 249 LNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 249 ~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
..+.....+.+.+|++ +..+++.++....+|..++..+..
T Consensus 135 ~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~ 175 (438)
T TIGR00712 135 GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVL 175 (438)
T ss_pred chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHH
Confidence 8787888888999865 577899999999888888765544
No 172
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.39 E-value=1.3e-05 Score=78.84 Aligned_cols=186 Identities=17% Similarity=0.203 Sum_probs=114.4
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCC-------
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGG------- 74 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~------- 74 (326)
+.|-++.|+|+.++|+---+|+-|++. +++-..+.|+.+.+..+|-++|-+++.+.++-..+.
T Consensus 241 f~~q~l~GIG~Tpi~tlGisYiDDnvk----------~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~i 310 (735)
T KOG3626|consen 241 FLGQLLLGIGATPIFTLGISYIDDNVK----------KKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGI 310 (735)
T ss_pred HHHHHHhhcCCCCCccCCCcccccccc----------ccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCC
Confidence 467899999999999999999999998 457889999999999999999999998877632211
Q ss_pred CCC------CchhhHHHHHHHHHHHHHHHHHccCCccccc------c-----chh---hhchhhhhHHHHHHHHHHHhhc
Q 020441 75 STS------GTTLLFIVFLGVITLGTILMCFLRKEEDKGE------K-----ETA---DASVNFYSYLVSLSKSITTLLA 134 (326)
Q Consensus 75 ~~~------~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~------~-----~~~---~~~~~~~~~~~~~~k~~~~~~~ 134 (326)
... -|..=|++...+..+..+.+++.|+..+... + +++ +++....+.+++..+.++++++
T Consensus 311 t~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~ 390 (735)
T KOG3626|consen 311 TPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLS 390 (735)
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccccccCCcchhhhHHHHHHHHHHHhc
Confidence 111 1555677766667777777778876433210 0 001 1112223366788888889999
Q ss_pred chhhHHHHHH-HHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHH-HHHHHHhhhhhhccCCC
Q 020441 135 DVRMLLIIPL-FAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGA-FDAICSLAAGRLTTGLP 199 (326)
Q Consensus 135 ~~~~lll~p~-~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi-~~~i~~~~~G~l~d~~g 199 (326)
||-.++.+-. .+..-...+|+ .|.+.|.....|.+ .+-..+...++ +.++|..++|.+.+|+.
T Consensus 391 N~if~~~~l~~~~~~~~~~G~~--tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfk 457 (735)
T KOG3626|consen 391 NPIFMLVVLASVIESLAITGYI--TFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFK 457 (735)
T ss_pred CchHHHHHHHHHHHHHHHhhHH--HhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeec
Confidence 8876543311 11111222222 34445666666654 22222222222 23455566677766653
No 173
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=98.37 E-value=3.5e-05 Score=72.19 Aligned_cols=140 Identities=11% Similarity=-0.051 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCC-----CChhhHHHHHHHHHHHHHHHH
Q 020441 145 FAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLWI 219 (326)
Q Consensus 145 ~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~-----g~~~~i~~~g~i~~~~~~~~~ 219 (326)
.+.+|...+|..+..+.-++++.+..+++|....+.-. .+..+++|++.||+ |||++.+..+.+....+...+
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l 85 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAM 85 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence 34456656666555543334443344578877655553 58899999999999 776545555554444333322
Q ss_pred HhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 220 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+. +++.+ .+..++..++.+++.+...+...+++.+.+|++ +..+.+.....+++|..++..+...+
T Consensus 86 ~~~-~~~~~---~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l 153 (402)
T PRK11902 86 AFC-PPHAA---LWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWL 153 (402)
T ss_pred Hhc-Cccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 222 22211 244566667778888888899999999999876 45566666666677766666655443
No 174
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.37 E-value=4.4e-06 Score=78.68 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=80.1
Q ss_pred hcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHH
Q 020441 133 LADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAI 210 (326)
Q Consensus 133 ~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i 210 (326)
+++|+...+.-..+......++..+.++. +..+.+|. .++|++...+.++..+++++.|+++||+|||+ .+..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~-~~~~~~~ 84 (420)
T PRK09528 7 LKNPNYWIFSLFFFFFFFIWSSWFSFFPI-WLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKK-HLLWIIS 84 (420)
T ss_pred hcCcchHHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHH
Confidence 44555555433333333333333344332 33444454 47899999999999999999999999999986 5444332
Q ss_pred HHHHHHHHHHh-cccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhh
Q 020441 211 AQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPY 289 (326)
Q Consensus 211 ~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~ 289 (326)
.........+. ...+.....-....++..+..|.+.....+....+. +.+++++...++..+.+.++|.++++.+...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~ 163 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYI-ERVSRRSGFEYGRARMWGSLGWALCAFIAGI 163 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHH-HHHHhhccccchhhHHhhhHHHHHHHHHHHH
Confidence 22211111111 111100000000112223333433333333333333 2223333335677888888888888888876
Q ss_pred hh
Q 020441 290 IS 291 (326)
Q Consensus 290 ~~ 291 (326)
+.
T Consensus 164 l~ 165 (420)
T PRK09528 164 LF 165 (420)
T ss_pred HH
Confidence 63
No 175
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.37 E-value=2.2e-05 Score=73.31 Aligned_cols=110 Identities=19% Similarity=0.195 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhh
Q 020441 173 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 252 (326)
Q Consensus 173 ~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~ 252 (326)
++.+..++.+...+++++.|+++||+|||+ .+..+.+......... ...++ ++..++..++.|++.+. .+.
T Consensus 56 ~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~-~~~ 126 (408)
T PRK09874 56 SGLVFSITFLFSAIASPFWGGLADRKGRKI-MLLRSALGMGIVMVLM--GLAQN-----IWQFLILRALLGLLGGF-VPN 126 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhCcHH-HHHHHHHHHHHHHHHH--HHHhh-----HHHHHHHHHHHHHhhhh-HHh
Confidence 477888899999999999999999999985 6666655544433221 22232 24556667778887654 455
Q ss_pred hHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 253 LSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 253 ~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
....+.+.+|++ +..+.+.++....+|..+++.+...+.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 166 (408)
T PRK09874 127 ANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLA 166 (408)
T ss_pred HHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667777888765 466788888888888888888887653
No 176
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.35 E-value=8.7e-06 Score=76.88 Aligned_cols=121 Identities=21% Similarity=0.148 Sum_probs=80.9
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhccC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCC-cchHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLI 237 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~----~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 237 (326)
++.+|++ .+|.++.+..+..++..|+.|.++|| +|||++.++.+.+...+..++.+ +.|+.+. ......++
T Consensus 27 ~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~ 104 (437)
T TIGR00792 27 TDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLF--TTPDFSATGKLVYAYI 104 (437)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHH--hCCCCCcchHHHHHHH
Confidence 4445554 78999999999999999999999997 57766666667665554443322 2332211 01133455
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCC--chhhhhHHHHHHHHHHHHHHHHh
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHD--TEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~--~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
..++++++.+..+....++..++.+++ |....+..+....+|..++..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~ 156 (437)
T TIGR00792 105 TYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIV 156 (437)
T ss_pred HHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667789999988888888988887543 44455666777777766655443
No 177
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.35 E-value=1.2e-05 Score=77.02 Aligned_cols=119 Identities=10% Similarity=-0.050 Sum_probs=85.8
Q ss_pred ccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH-HHH--hcccCCCCCcchHHHHHHHH
Q 020441 166 PALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-WIL--INYSVTSGVLGTLYPLIMAA 240 (326)
Q Consensus 166 ~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~-~~~--l~~~~~~~~~~~~~~~~~~~ 240 (326)
+.+|. .+.+++...+.++..++.++.|++.||+|+|+ ++..+.+...+... ... ....++ ....++..+
T Consensus 57 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~ 130 (467)
T PRK09556 57 STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQ-FLPFLLILSAICMLGFGASLGSGSVS-----LGLMIALWA 130 (467)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccc-hHHHHHHHHHHHHHHHHHHHhcccch-----HHHHHHHHH
Confidence 34554 47888889999999999999999999999995 65555444332221 111 112222 345666777
Q ss_pred HHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 241 LLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 241 l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.|++.+...+....++.+.+|++ +..+.+.+....++|.+++..+...+
T Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~ 181 (467)
T PRK09556 131 LSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG 181 (467)
T ss_pred HHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH
Confidence 889999988888889999999876 56688888888888888887776433
No 178
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.35 E-value=1.2e-05 Score=76.82 Aligned_cols=117 Identities=14% Similarity=-0.045 Sum_probs=83.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHh----ccc-CCCCCcchHHHHHHHHHHhhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI----NYS-VTSGVLGTLYPLIMAALLGIG 245 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l----~~~-~~~~~~~~~~~~~~~~l~G~~ 245 (326)
.+.+++...+.++..+++++.|+++||+|||+ ++..+.++.....+.... ... ..++.......++.-++.|++
T Consensus 55 ~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~-~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~ 133 (479)
T PRK10077 55 SLLGFCVASALIGCIIGGALGGYCSNRFGRRD-SLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIG 133 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhh
Confidence 36788889999999999999999999999996 666665554433222111 000 001100012345667899999
Q ss_pred hHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 246 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 246 d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
.+...+...++++|.+|++ |..+.+.+.....+|..+++.++.
T Consensus 134 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~ 177 (479)
T PRK10077 134 VGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNY 177 (479)
T ss_pred HhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999976 566788888888888888776643
No 179
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.34 E-value=1.4e-05 Score=76.85 Aligned_cols=116 Identities=9% Similarity=-0.027 Sum_probs=88.0
Q ss_pred cccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|.+ +.+.....+.++..+++++.|++.||+|||+ .+..+.+......+.. ...++ ++..++..++.|+
T Consensus 49 ~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~l~~~~~l~G~ 120 (496)
T PRK03893 49 EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRL-AMVISIVLFSVGTLAC--GFAPG-----YWTLFIARLVIGM 120 (496)
T ss_pred HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHH-HHHHHHHHHHHHHHHH--HHHhH-----HHHHHHHHHHHHH
Confidence 44543 6778888888999999999999999999995 6666655544443321 22333 3556777889999
Q ss_pred hhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 245 GDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.+...+....++.+.+|++ +..+++.+.....+|..+++.+...+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 167 (496)
T PRK03893 121 GMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLV 167 (496)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999876 46678888888888888888877655
No 180
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.34 E-value=4.5e-05 Score=73.54 Aligned_cols=153 Identities=8% Similarity=0.001 Sum_probs=91.6
Q ss_pred hhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCC-----CChhhHHH
Q 020441 132 LLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVS 206 (326)
Q Consensus 132 ~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~-----g~~~~i~~ 206 (326)
..++||...+.-+.+.+|.......+..+.-+.......++++... ..+.. .++.+++|.+.||+ |||+..+.
T Consensus 8 ~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll 85 (491)
T PRK11010 8 IFQQPNSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLL 85 (491)
T ss_pred HHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHH
Confidence 4456776666656667776666554444332222222333566542 22222 26789999999998 88853444
Q ss_pred HHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHH
Q 020441 207 GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFF 285 (326)
Q Consensus 207 ~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~ 285 (326)
.+.+....+..... ..+|.. +.+...+..++.+++.+.......++..+.+|++ +..+.+.......+|..++..
T Consensus 86 ~~~i~~~~~~~~~a-~~~~~~---~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~ 161 (491)
T PRK11010 86 ATQLLLLVAIAAMG-FLEPGT---QLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGG 161 (491)
T ss_pred HHHHHHHHHHHHHH-HcCCcc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHH
Confidence 45444433332211 122321 1345566677889999988889999999999855 555666777777777777765
Q ss_pred Hhhhh
Q 020441 286 IGPYI 290 (326)
Q Consensus 286 i~~~~ 290 (326)
+...+
T Consensus 162 l~~~l 166 (491)
T PRK11010 162 LALWL 166 (491)
T ss_pred HHHHH
Confidence 55443
No 181
>PTZ00207 hypothetical protein; Provisional
Probab=98.34 E-value=4e-05 Score=74.88 Aligned_cols=128 Identities=9% Similarity=0.073 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHhhhhhhc----cCC----CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhH
Q 020441 176 AMAVYGAFDAICSLAAGRLT----TGL----PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 247 (326)
Q Consensus 176 ~~~~~gi~~~i~~~~~G~l~----d~~----g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~ 247 (326)
...+.++.+.+|....|.++ +|. -+| ++++....+..+..+++++..+. ..+++.+++.|++.+
T Consensus 396 ~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~pr-t~~l~~~~~~~~~~lll~~~~p~-------~~L~~~~~lvg~~~G 467 (591)
T PTZ00207 396 LTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPI-TIALFIPSVCIITMLTLFLTLPK-------AALPLPYFIAAFANG 467 (591)
T ss_pred ehhhhhHHHHhhHHHHHHHHHHHHhhccccccch-hHHHHHHHHHHHHHHHHHHHCCc-------cHhHHHHHHHHHHhh
Confidence 45678889999999988654 222 122 23333322222333333334331 246888999999999
Q ss_pred HhhhhhHhhHHhhccCCchhhhhHHHHHH---HHHHHH------HHHHhh-------hh-----hHHHHHHHHHHHHHHH
Q 020441 248 VLNTQLSALLGILFKHDTEGAFAQLKVWQ---CASIAV------VFFIGP-------YI-----SLQAMLIVMVVGICVA 306 (326)
Q Consensus 248 ~~~~~~~~il~~~f~~~~~~~fa~~~~~~---~~g~~i------~~~i~~-------~~-----~~~~~~~~~~~~~~~~ 306 (326)
...+....+..|+|.++-.. .||+.. -+|+-+ +..++. .. |...+..++.++++.+
T Consensus 468 ~~~~~~~~i~selFgk~~g~---~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g 544 (591)
T PTZ00207 468 FMAATIALVTRTIFAKDPAK---HYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLA 544 (591)
T ss_pred HhHHHHHHHHHHHhccchHH---HhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHH
Confidence 99999999999999833233 444444 333322 222211 11 2455667777777777
Q ss_pred HHHHHHHH
Q 020441 307 LVGILFLT 314 (326)
Q Consensus 307 ~~~~~~~~ 314 (326)
.+.-.++.
T Consensus 545 ~~~s~~l~ 552 (591)
T PTZ00207 545 FITSTYVH 552 (591)
T ss_pred HHHHhhee
Confidence 77655553
No 182
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.33 E-value=1.9e-06 Score=79.04 Aligned_cols=110 Identities=13% Similarity=0.091 Sum_probs=84.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
.+.+++...+.++..+++++.|++.||+|||+ ++..+.++..+..++. .+.++ ++..++..++.|++.+...
T Consensus 30 ~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~g~~~~~~~ 101 (379)
T TIGR00881 30 TDLGLLLSSFSIAYGISKFVMGSVSDRSNPRV-FLPIGLILCAIVNLFF--GFSTS-----LWVMAALWALNGIFQGMGW 101 (379)
T ss_pred hHHHHHHHHHHHHHHhhhhhhhHHHHhhCCee-hhHHHHHHHHHHHHHH--HHhhh-----HHHHHHHHHHHHhhccccC
Confidence 47788889999999999999999999999995 6666665555443322 22233 3556777888899999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHH-HHhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVF-FIGP 288 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~-~i~~ 288 (326)
+..++++.+.+|++ +..+++..+..+.+|..+++ .+..
T Consensus 102 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~ 141 (379)
T TIGR00881 102 PPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLF 141 (379)
T ss_pred CchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHH
Confidence 99999999999975 56678888888888888887 3443
No 183
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.32 E-value=4e-05 Score=73.60 Aligned_cols=116 Identities=10% Similarity=0.048 Sum_probs=77.7
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALL 242 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 242 (326)
.+.+|.+ +.+.+...+.++..++.++.|++.||+|||+ ++..+.+......++ ..+.++ +...++..++.
T Consensus 63 ~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~-~~~~~~~~~~~~~~~--~~~~~s-----~~~l~~~r~l~ 134 (476)
T PLN00028 63 RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRY-GSAFLLMLTAPAVFC--MSLVSS-----ATGFIAVRFFI 134 (476)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChH-HHHHHHHHHHHHHHH--HHHhcC-----HHHHHHHHHHH
Confidence 3345553 6677777788888899999999999999985 655555444433322 222333 24455666788
Q ss_pred hhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhh
Q 020441 243 GIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 289 (326)
Q Consensus 243 G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~ 289 (326)
|++.+...+ ....+++.+|++ +..+.+..+....+|.+++..+.+.
T Consensus 135 G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~ 181 (476)
T PLN00028 135 GFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPL 181 (476)
T ss_pred HHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776543 455778999865 5778888877777777776655543
No 184
>TIGR00898 2A0119 cation transport protein.
Probab=98.31 E-value=1.6e-05 Score=76.67 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=86.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
+.+++..++.++..+++++.|+++||+|||+ ++..+.++..+..+.. .+.++ ++..++..++.|++.+...+
T Consensus 128 ~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~-~~~~~~~~~~i~~~~~--~~~~~-----~~~~~~~r~l~G~~~~~~~~ 199 (505)
T TIGR00898 128 KVDLTQSCFFVGVLLGSFVFGYLSDRFGRKK-VLLLSTLVTAVSGVLT--AFSPN-----YTVFLVFRLLVGMGIGGIWV 199 (505)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhccchH-HHHHHHHHHHHHHHHH--HHccc-----HHHHHHHHHHHHhhccchHH
Confidence 5688889999999999999999999999995 6666665555443322 23343 35667778899999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...+++.|.+|++ +..+.+.+....++|..+++.++..+
T Consensus 200 ~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~ 239 (505)
T TIGR00898 200 QAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI 239 (505)
T ss_pred HHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999876 55566677888888888888776544
No 185
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=98.28 E-value=1.2e-05 Score=73.85 Aligned_cols=112 Identities=12% Similarity=0.093 Sum_probs=90.4
Q ss_pred ccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhH
Q 020441 168 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDG 247 (326)
Q Consensus 168 lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~ 247 (326)
+..++.|++..++.++..++-.+.|.++||.++|. .+.+|.++..++-++ +-+.++ .....++.++-|..++
T Consensus 61 lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~-fm~~gLilsai~nil--~Gfs~s-----~~~~~~l~~lng~fQg 132 (448)
T COG2271 61 LSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRY-FMAFGLILSAIVNIL--FGFSPS-----LFLFAVLWVLNGWFQG 132 (448)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCce-eehHHHHHHHHHHHH--HhhhhH-----HHHHHHHHHHHHHHhc
Confidence 34458899999999999999999999999999884 677777776655432 233332 3456677788899999
Q ss_pred HhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHh
Q 020441 248 VLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 248 ~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
.--+.....++..||.+ |....|+.|..+++|+++.+.+.
T Consensus 133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~ 173 (448)
T COG2271 133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVA 173 (448)
T ss_pred CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHH
Confidence 88899999999999865 67789999999999999999887
No 186
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.24 E-value=7.2e-06 Score=74.24 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=83.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH-HHHHhhhhHHhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM-AALLGIGDGVLN 250 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~l~G~~d~~~~ 250 (326)
..|++-..+++.+.+.++.+|+++||+||| +++..+.+..++.... .....+ . .+++. -++.|+..+- -
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRk-pvll~c~~~va~s~ll--~~~S~~-----F-~afv~aR~l~Gi~kgn-l 138 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRK-PVLLACLIGVALSYLL--WALSRN-----F-AAFVLARFLGGIFKGN-L 138 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCch-HHHHHHHHHHHHHHHH--HHHHHH-----H-HHHHHHHHhhhhccCc-h
Confidence 568888999999999999999999999999 5877776665543321 111111 1 24444 5677777764 4
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhhH
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISL 292 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~~ 292 (326)
+..-++++|.++++ +..+++.....-++|.-+++.++.++..
T Consensus 139 ~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 139 SVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 67789999999876 5678999999999999999999888875
No 187
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.24 E-value=2.2e-05 Score=74.91 Aligned_cols=111 Identities=11% Similarity=0.061 Sum_probs=77.7
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH-HHHHhhhhHHhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM-AALLGIGDGVLN 250 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~l~G~~d~~~~ 250 (326)
..++....+.+...+++++.|++.||+|||+ +++.+.++.....+. ..+.++ .+..++. .++.|++.+...
T Consensus 55 ~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~--~~~~~~-----~~~l~~~~~~l~G~~~~~~~ 126 (455)
T TIGR00892 55 ETAWISSIMLAVLYAGGPISSILVNRFGCRP-VVIAGGLLASLGMIL--ASFSSN-----VIELYLTAGFITGLGLAFNF 126 (455)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHcCchH-HHHhhHHHHHHHHHH--HHHhhh-----HHHHHHHHHHHHHhcchhhh
Confidence 5667777777778889999999999999995 666665554433322 122233 2333333 356688887665
Q ss_pred hhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 251 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 251 ~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.....++.+.+|+++..+.+..+....+|..+++.+...+
T Consensus 127 ~~~~~~~~~~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l 166 (455)
T TIGR00892 127 QPSLTMLGKYFYRRRPLANGLAMAGSPVFLSTLAPLNQYL 166 (455)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 5666788888987777788899999999888887776655
No 188
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.23 E-value=0.00043 Score=62.64 Aligned_cols=246 Identities=13% Similarity=0.117 Sum_probs=131.8
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL 82 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~ 82 (326)
.+.++.|.|.++..+---..+=+.= +++.+..+|++-...+.+..+|..++.=+-+.. .+||.-
T Consensus 104 ~gt~l~G~gIav~nVLLPslIK~~F-----------pk~~~~mtglYs~sl~~~aaLaa~lavpla~~~-----~gW~~a 167 (395)
T COG2807 104 LGTLLAGAGIAVINVLLPSLIKRDF-----------PKRVGLMTGLYSTSLGAGAALAAALAVPLAQHS-----GGWRGA 167 (395)
T ss_pred HHHHHHHhhHHHHHHhhhHHHHhhc-----------ccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhh-----ccHHHH
Confidence 3455566666655544333332222 356777777765555555555554443332211 468754
Q ss_pred HHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHH---hhc
Q 020441 83 FIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVW---AEF 159 (326)
Q Consensus 83 f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~---~~~ 159 (326)
.......+.++ +..++|+..+++....+.+. ++..++++||....+ .+|.|++..-++ +-+
T Consensus 168 L~~WAl~allA--l~~WlPq~~r~~~~~~~~~~-----------~~~~~vw~~~~aW~v---tLfmGlqS~~~Y~~~~WL 231 (395)
T COG2807 168 LGFWALLALLA--LLIWLPQALREQAASIATKL-----------VSVRKVWRSPLAWQV---TLFMGLQSLLYYIVIGWL 231 (395)
T ss_pred HHHHHHHHHHH--HHHHhhhccccccccccccc-----------ccccccccCchhHHH---HHHHHhhHHHHHHHHHHH
Confidence 44333333332 24566664332111101000 111235677765543 466776654443 345
Q ss_pred ccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHH
Q 020441 160 TKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIM 238 (326)
Q Consensus 160 ~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~-g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (326)
++.++++.++-.+.|....+..+.+...+...-.+.+|. .+| ++......+....++-. .+.|.. ..+.-
T Consensus 232 P~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r-~~~~~~~~~~l~G~~G~--~~~P~~------~~~lw 302 (395)
T COG2807 232 PAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR-PLVVLALLLMLVGLVGL--LLAPGQ------LPILW 302 (395)
T ss_pred HHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHH--HHhhhh------HHHHH
Confidence 666666666666778777788888888877777776643 445 45544444444433221 233432 11222
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHH---HHHHHHHhhhh
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCAS---IAVVFFIGPYI 290 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g---~~i~~~i~~~~ 290 (326)
.+++|++.+...+..-.++....++.++ +=+...+.|++| ++.++.+..++
T Consensus 303 ~~llG~G~G~~F~laL~li~~rs~~a~~-Aa~LSgmaQg~GYllAa~GP~l~G~l 356 (395)
T COG2807 303 ALLLGLGQGGAFPLALTLILLRSSDAAI-AAALSGMAQGVGYLLAAFGPWLFGFL 356 (395)
T ss_pred HHHHhCccchHHHHHHHHHHhhcCChHH-HHHHHHHhhhhhHHHHhhhhhhHhHH
Confidence 5888999888888888888777666543 333555566555 55566666555
No 189
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.22 E-value=4.5e-05 Score=73.19 Aligned_cols=119 Identities=17% Similarity=0.144 Sum_probs=80.7
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhcc----CCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCc-chHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSVTSGVL-GTLYPLI 237 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d----~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~-~~~~~~~ 237 (326)
++.+|++ .+|.++.+.-+..++..|+.|.++| |+|||++.++.+.+...+.+.+++ .+|+.+.. .....++
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf--~~p~~~~~~~~~~~~~ 111 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLF--SAHLFEGTAQYVFVCV 111 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHH--cCCCCCccHHHHHHHH
Confidence 3445554 7889999999999999999999999 558866777777776665543322 23322110 1233556
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCC--chhhhhHHHHHHHHHHHHHHH
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHD--TEGAFAQLKVWQCASIAVVFF 285 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~--~~~~fa~~~~~~~~g~~i~~~ 285 (326)
.+++++++.+..+..-.++..++.++. |...++.-+.+..+|+.+...
T Consensus 112 ~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~ 161 (473)
T PRK10429 112 TYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAG 161 (473)
T ss_pred HHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677889999999999999999998654 343444546666666554433
No 190
>PRK11462 putative transporter; Provisional
Probab=98.21 E-value=8.2e-05 Score=71.13 Aligned_cols=120 Identities=23% Similarity=0.182 Sum_probs=84.2
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhccC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc-hHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG-TLYPLI 237 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~----~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~-~~~~~~ 237 (326)
++.+|++ .+|.++++.-+..++.-|+.|.++|| +|||+|-++.+.+...+..++++ ..|+.+... ....++
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf--~~p~~s~~~~~~y~~~ 114 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAY--STPDLSMNGKMIYAAI 114 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHH--hCCCCCcchHHHHHHH
Confidence 3445654 78888999999999999999999995 57776677777666655544332 234321111 234566
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCCc--hhhhhHHHHHHHHHHHHHHHH
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFI 286 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~~--~~~fa~~~~~~~~g~~i~~~i 286 (326)
.++++.++..+.+..-.++.+++.+|.+ ....+.......+|..++..+
T Consensus 115 ~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 115 TYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred HHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999998653 445556666667766665444
No 191
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.21 E-value=4.8e-05 Score=70.58 Aligned_cols=112 Identities=14% Similarity=0.030 Sum_probs=79.2
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
++.+++...+.++..+++++.|.+.||+|||+ ++............ .. ...++ +...++.-++.|++.+..
T Consensus 26 ~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~-~~~~~~~~~~~~~~-~~-~~~~~-----~~~l~~~R~l~G~g~~~~- 96 (368)
T TIGR00903 26 EELGLLAITYPAAFLALTIPSGLLLDRAFKRW-FLFGSLATFAAAAG-RL-LDPFN-----YEWLLACQLLAALGQPFL- 96 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccchH-HHHHHHHHHHHHHH-HH-HHhcc-----HHHHHHHHHHHHhHhHHH-
Confidence 36788888889999999999999999999885 54433322222211 11 11122 355677778889988864
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
......+.+.+|++ |..+.+.......+|..+++.+...+.
T Consensus 97 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~ 138 (368)
T TIGR00903 97 LNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY 138 (368)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445568888865 466888999999999999998887774
No 192
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.21 E-value=3e-07 Score=84.99 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=93.1
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
.+..|++..++-++.++.+|+.|.+.||+.|+. ++.+|..+-..+.+.. .+..+ ++...++-.+.|+|.+.+
T Consensus 67 ~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~-v~~vG~~iW~~Av~~~--~fs~~-----Fwq~~l~R~~vGiGeAs~ 138 (493)
T KOG1330|consen 67 DSELGLLQTVFIVVFMIASPLFGYLADRYNRKR-VIAVGIFIWTLAVFAS--GFSNH-----FWQVLLCRGFVGIGEASY 138 (493)
T ss_pred chhccchhHHHHHHHHHHHHHHHHHHhhcCcce-EEeeHHHHHHHHHHHH--HHHHH-----HHHHHHHHHHhccchhhh
Confidence 346678888999999999999999999999995 7777766555443221 11111 467778888999999999
Q ss_pred hhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 250 NTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 250 ~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+..++++++.||++ |..+|+++++....|++++|.+++.+.
T Consensus 139 ~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va 181 (493)
T KOG1330|consen 139 SPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVA 181 (493)
T ss_pred cccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeec
Confidence 999999999999987 577999999999999999999998774
No 193
>PRK09848 glucuronide transporter; Provisional
Probab=98.21 E-value=7.1e-05 Score=71.20 Aligned_cols=99 Identities=17% Similarity=0.257 Sum_probs=64.5
Q ss_pred cccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCC----CChhhHHHHHHHHHHHHHHHHHhcccCC-CCCcchHHHHH
Q 020441 165 TPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGL----PSITFIVSGGAIAQVVVFLWILINYSVT-SGVLGTLYPLI 237 (326)
Q Consensus 165 ~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~----g~~~~i~~~g~i~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 237 (326)
++.+|. ..+|.+..+..+..++..++.|+++||. |||++.+..+.+.......+.+. .+.+ ++.......+.
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 114 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFW-VPTDWSHSSKVVYAYL 114 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHh-CcCCCCcchHHHHHHH
Confidence 344454 4789999999999999999999999985 66665555555544433332221 1111 11001123455
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCC
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHD 264 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~ 264 (326)
..++++++.+..++...++..++.++.
T Consensus 115 ~~~~~~~~~~~~~~~~~al~~~~~~~~ 141 (448)
T PRK09848 115 TYMGLGLCYSLVNIPYGSLATAMTQQP 141 (448)
T ss_pred HHHHHHHHHHHhcccHhhhhhhhcCCH
Confidence 567889999999988888888777664
No 194
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.18 E-value=0.00011 Score=70.99 Aligned_cols=115 Identities=11% Similarity=-0.065 Sum_probs=83.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..+.+...+.++..+++++.|++.||+|||+ .+..+.++..+..++..... ...+.......++.-++.|++.+...+
T Consensus 57 ~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~-~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 57 VSAAVNGSASIGTLAGQLFFGWLADKLGRKR-VYGMELIIMIIATVASGLSP-GSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHHHHHcc-CcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 5577888899999999999999999999995 66666555554433222221 111110123456777889999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
..+.++.|.+|.+ |..+.+.......+|..++..+..
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~ 172 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVAL 172 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999976 566778888888888877776654
No 195
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.18 E-value=0.00016 Score=67.53 Aligned_cols=142 Identities=11% Similarity=0.040 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHH
Q 020441 142 IPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWI 219 (326)
Q Consensus 142 ~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~ 219 (326)
....+..+...++....++. +..+.+|.+ ++|+......+...+.+++.|.+.||+|+|+.++..+.+...+....
T Consensus 21 ~~~~~~~~~~~~~~~p~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~dr~g~r~~~~~~~~~~~~~~~~~- 98 (393)
T PRK15011 21 LIVAFLTGIAGALQTPTLSI-FLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTL- 98 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHH-
Confidence 33456666665555444332 334455643 67777655556555555565555999998863444443332222211
Q ss_pred HhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chh-hh-hHHHHHHHHHHHHHHHHhhhhh
Q 020441 220 LINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEG-AF-AQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~-~f-a~~~~~~~~g~~i~~~i~~~~~ 291 (326)
..+.++ ++..++...+.+...+...+...++..+..|++ ++. .+ +..+..+++|..+++.+...+.
T Consensus 99 -~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~ 167 (393)
T PRK15011 99 -FAWNRN-----YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALA 167 (393)
T ss_pred -HHHhhH-----HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 122232 233334444444444555666677776655543 332 34 4778888899999988887664
No 196
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.17 E-value=7e-05 Score=67.80 Aligned_cols=124 Identities=6% Similarity=-0.125 Sum_probs=73.8
Q ss_pred HHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhH
Q 020441 178 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 257 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il 257 (326)
+...+.+.-|.++.+.+.||+|||+ .+....++..++.++.+....++ ...+..+..-.+-++-....|..-
T Consensus 388 litslaefPGlLIt~~iverlGRKk-TMal~l~~f~iflfll~~c~~rn-------~~tvllf~arafisg~fqvaYvYt 459 (528)
T KOG0253|consen 388 LITSLAEFPGLLITGVIVERLGRKK-TMALSLILFGIFLFLLTTCKTRN-------AYTVLLFTARAFISGAFQVAYVYT 459 (528)
T ss_pred HHHHHhhCCchhHHHHHHHHhcchh-HHHHHHHHHHHHHHHHHHhcCcc-------hhHHHHHHHHHHHhchheEEEEec
Confidence 4556677889999999999999997 66555554444333323233333 111111222222333345668888
Q ss_pred HhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHHHH
Q 020441 258 GILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI--SLQAMLIVMVVGICVALVG 309 (326)
Q Consensus 258 ~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~--~~~~~~~~~~~~~~~~~~~ 309 (326)
-|.||+. |..+.+.-....=+|+-++++++-.. ++..++.+.-+.++++.++
T Consensus 460 PEVyPTavRatgvGtcSsmaRIggI~~p~iA~~~e~s~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 460 PEVYPTAVRATGVGTCSSMARIGGIFSPVIAMRAELSTSLPIFVYGALFILAGIA 514 (528)
T ss_pred CcccchhhhhcchhhhhhHHhhhhhhhhHHHHHhccceeehHHHHHHHHHHHHHH
Confidence 8999987 57777766666667778888777222 2344555555555555544
No 197
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.16 E-value=1.4e-05 Score=76.25 Aligned_cols=114 Identities=9% Similarity=-0.017 Sum_probs=85.9
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..|.+...+.++..+++++.|++.||+|+|+ ++..+.++..+..++......++ ....++..++.|++.+...+
T Consensus 77 ~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~-~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~r~~~G~~~~~~~~ 150 (465)
T TIGR00894 77 LQGLILSSHFYGQIIIQIPVGYLAGKYVFKW-SIGIGMFLSSVISIVIPWAAGGG-----IALVVFCRVIQGLAQGSVSP 150 (465)
T ss_pred HhhHHHHHHHHHHHHHHcchHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHcC-----chHHHHHHHHHHHhcccchh
Confidence 5677788888999999999999999999995 66555544433322211122222 24567778899999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
....++.+.+|++ +..+.+.+.....+|..+++.+...+.
T Consensus 151 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~ 191 (465)
T TIGR00894 151 ATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLC 191 (465)
T ss_pred hHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999965 576888999989999999888877654
No 198
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.13 E-value=0.0001 Score=67.67 Aligned_cols=114 Identities=10% Similarity=-0.054 Sum_probs=72.6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCC-----CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGL-----PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 245 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~-----g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~ 245 (326)
+++++.... ++...+ .+++|++.||+ |||++.+..+.+.......... ...+.. +.+..+...++.+++
T Consensus 23 ~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~-~~~~~~---~l~~l~~~~~~~~~~ 96 (356)
T TIGR00901 23 KTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILS-FLVPST---DLPLLAGLAFLIAFF 96 (356)
T ss_pred HHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHH-cCCcch---hHHHHHHHHHHHHHH
Confidence 356665433 444444 88999999997 7876444555544443322211 122221 124456667778888
Q ss_pred hHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 246 DGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 246 d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+.......+++.+.+|++ +..+.+......++|..++..+...+
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l 142 (356)
T TIGR00901 97 SATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL 142 (356)
T ss_pred HHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988899999999999765 45567777777777777777766544
No 199
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.10 E-value=0.00019 Score=66.73 Aligned_cols=112 Identities=7% Similarity=0.002 Sum_probs=77.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhh---HHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITF---IVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 246 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~---i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d 246 (326)
..++|+...++.+...+++++.|++.||++|+.. .+..+... .... +....++ .+..++..++.|++.
T Consensus 38 ~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~---~~~~-~~~~~~~-----~~~l~i~~~l~g~~~ 108 (382)
T PRK11128 38 PETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL---FAVA-FWFGAHS-----FWLLFVAIGLFNLFF 108 (382)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH---HHHH-HHHhccc-----HHHHHHHHHHHHHHH
Confidence 3488999999999999999999999999998421 22111111 1111 1122222 355566677788888
Q ss_pred HHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 247 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 247 ~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+...+...++..+. +++++.+++..+...++|.++++.+...+.
T Consensus 109 ~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~ 152 (382)
T PRK11128 109 SPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLV 152 (382)
T ss_pred cccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88888777766654 555666788889999999999999987664
No 200
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.08 E-value=5.3e-05 Score=71.16 Aligned_cols=132 Identities=22% Similarity=0.255 Sum_probs=89.1
Q ss_pred HHHHHhhhhhhccCC-CChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhcc
Q 020441 184 DAICSLAAGRLTTGL-PSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFK 262 (326)
Q Consensus 184 ~~i~~~~~G~l~d~~-g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~ 262 (326)
.=....++|+++||+ |+|+ .+..|+++.++..+. +..++.. .+...++..++.++|.+.+.+...+++++++|
T Consensus 74 VY~t~i~GG~laDr~LG~~~-tI~lGail~~iGh~~--L~~~~~~---~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~ 147 (498)
T COG3104 74 VYLTPIIGGWLADRVLGTRR-TIVLGAILMAIGHLV--LAISSVS---GPGGLYIGLALIIVGTGLFKPNISSLLGELYP 147 (498)
T ss_pred HHHHHHHHHHHHHHhcchhH-HHHHHHHHHHHHHHH--Hhccccc---cccHHHHHHHHHHhccccccccHHHHHHHhcC
Confidence 334667789999996 7775 566777776665543 2333211 12456777788899999999999999999998
Q ss_pred CC---chhhhhHHHHHHHHHHHHHHHHhhhhhHHHH----HHHHHHHHHHHHHHHHHHHHHHhhcc
Q 020441 263 HD---TEGAFAQLKVWQCASIAVVFFIGPYISLQAM----LIVMVVGICVALVGILFLTIQVEKAF 321 (326)
Q Consensus 263 ~~---~~~~fa~~~~~~~~g~~i~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (326)
++ +..+|+.+-..-++|+.+++.+.+++..... .....+-..++.+.|....++.+.+.
T Consensus 148 ~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~ 213 (498)
T COG3104 148 KDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIG 213 (498)
T ss_pred CCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCC
Confidence 53 3568998888888999999999888753321 12222334555666655555554444
No 201
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=98.06 E-value=0.00018 Score=66.99 Aligned_cols=115 Identities=10% Similarity=-0.056 Sum_probs=75.7
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
..++++....+.+...+++++.|.+.||.+|+........+........ +....++ ++..++..++.|.+.+..
T Consensus 38 ~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~-----~~~l~~~~~l~~~~~~~~ 111 (382)
T TIGR00902 38 EEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAAA-FSAGAHN-----AWLLFIAIGLFALFFSAG 111 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH-HHHhhhh-----HHHHHHHHHHHHHHHccc
Confidence 3488999999999999999999999999987531111111111111111 1122333 355556666677777777
Q ss_pred hhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 250 NTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 250 ~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.+...++..+ +++++..+++..+.+.++|..+++.+...+.
T Consensus 112 ~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~ 152 (382)
T TIGR00902 112 MPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLI 152 (382)
T ss_pred hhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 7777776644 4555566899999999999999998876664
No 202
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.06 E-value=0.00011 Score=71.50 Aligned_cols=97 Identities=16% Similarity=0.113 Sum_probs=66.3
Q ss_pred cccccch-hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 165 TPALGVS-GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 165 ~~~lg~~-~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
...+|-+ ...++.....+...++.++.||++|.+||| .+++.+.++..+..+. ..-.++ ........++.|
T Consensus 71 ~~diG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-~~~i~g~~l~vvG~Iv--~atA~~-----~~~~iag~~l~G 142 (599)
T PF06609_consen 71 NADIGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-YFFIIGSLLGVVGSIV--CATAQN-----MNTFIAGMVLYG 142 (599)
T ss_pred HHhcCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-HHHHHHHHHHHhHHHH--hhcCCc-----HHHHHHHHHHHH
Confidence 3445543 556667778888999999999999999999 4777777776655442 122222 244566678889
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFA 270 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa 270 (326)
++.+.. ...+..++|+.|.+ |..+.+
T Consensus 143 vgaG~~-~~~~~~isEl~p~k~R~~~~~ 169 (599)
T PF06609_consen 143 VGAGVQ-ELAALAISELVPNKWRGLGLA 169 (599)
T ss_pred HhhHHH-HHHHHHHHHhcccchhhhHhH
Confidence 986554 45577789999976 443444
No 203
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.05 E-value=0.00035 Score=66.10 Aligned_cols=107 Identities=9% Similarity=-0.076 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCc---chHHHHHHHHHHhhhhHHhhhhhH
Q 020441 178 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVL---GTLYPLIMAALLGIGDGVLNTQLS 254 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~l~G~~d~~~~~~~~ 254 (326)
....++..++++++|+++||+|||+ .+..+.++.....+.. ...|+.... .+....+.-++.|++.+...+...
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~ 146 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKK-SMLISVCMMCFGSLVI--ACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA 146 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHH-HHHHHHHHHHHHHHHH--hhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH
Confidence 3344455599999999999999996 6666655554333221 222321100 012355667889999999999999
Q ss_pred hhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHh
Q 020441 255 ALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 255 ~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
+++.|.+|++ |....+.....+..|..++..+.
T Consensus 147 ~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~ 180 (432)
T PRK10406 147 TYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVV 180 (432)
T ss_pred HHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999866 45456677777777766666553
No 204
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.05 E-value=0.00015 Score=66.92 Aligned_cols=103 Identities=9% Similarity=-0.028 Sum_probs=70.1
Q ss_pred HHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc---hHHHHHHHHHHhhhhHHhhhhhHhhHHhh
Q 020441 184 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLGIL 260 (326)
Q Consensus 184 ~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~~~~~~il~~~ 260 (326)
..+++++.|++.||+|||+ .+..+.++........ ...++.+... +...++..++.|++.+...+..+.++.+.
T Consensus 48 ~~i~~~~~G~l~dr~g~r~-~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~ 124 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKK-TLVITLLMMGIGTLLI--GLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEY 124 (394)
T ss_pred hhhHHHHhhhhhhhhhhHH-HHHHHHHHHHHHHHHH--hhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhc
Confidence 3578899999999999995 6666666555443221 2222211000 01345556888999998888889999999
Q ss_pred ccCC-chhhhhHHHHHHHHHHHHHHHHhhh
Q 020441 261 FKHD-TEGAFAQLKVWQCASIAVVFFIGPY 289 (326)
Q Consensus 261 f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~ 289 (326)
+|++ |....+.......+|..++..+...
T Consensus 125 ~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~ 154 (394)
T TIGR00883 125 APPGKRGFYGSFQQVGAPVGLLLAALTVLL 154 (394)
T ss_pred CCcccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9865 4556778888888888877766543
No 205
>PRK09669 putative symporter YagG; Provisional
Probab=98.05 E-value=7.3e-05 Score=71.03 Aligned_cols=118 Identities=19% Similarity=0.139 Sum_probs=78.2
Q ss_pred ccccch--hhHHHHHHHHHHHHHHHhhhhhhccC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCC-cchHHHHHH
Q 020441 166 PALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLIM 238 (326)
Q Consensus 166 ~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~----~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~-~~~~~~~~~ 238 (326)
+.+|++ .+|.+..+.-+..++..|+.|.++|| +|||++.++.+.+...+...+.+ +.|+.+. ......++.
T Consensus 38 ~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f--~~p~~~~~~~~~~~~~~ 115 (444)
T PRK09669 38 DVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF--YTPDFGATGKIIYACVT 115 (444)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH--hCCCCCcchHHHHHHHH
Confidence 345554 78999999999999999999999998 67766666667665554443322 2333211 112345566
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCC--chhhhhHHHHHHHHHHHHHHH
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHD--TEGAFAQLKVWQCASIAVVFF 285 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~--~~~~fa~~~~~~~~g~~i~~~ 285 (326)
+++++.+.+..+....++.+++.+++ |....+.......+|..++..
T Consensus 116 ~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~ 164 (444)
T PRK09669 116 YILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSV 164 (444)
T ss_pred HHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888889988889999988654 333344555555666555544
No 206
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.03 E-value=9.3e-07 Score=85.72 Aligned_cols=188 Identities=16% Similarity=0.176 Sum_probs=3.0
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCC---C-----
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDD---K----- 72 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~---~----- 72 (326)
++.+.++.|+|++++|+---+|+-|+.++ ++-+.|.|+.++...+|-.+|-+++...++.. +
T Consensus 144 f~~gq~l~GiG~~pl~tLG~tYiDDnv~~----------~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~ 213 (539)
T PF03137_consen 144 FILGQLLIGIGATPLYTLGITYIDDNVSK----------KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPD 213 (539)
T ss_dssp --------SSS---------------------------------------------------------------------
T ss_pred HHHHHHHHhccccCCccceeeeecccccc----------ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCcccccc
Confidence 36788999999999999999999999994 57789999999988888888888877655421 0
Q ss_pred --CC----CCC--CchhhHHHHHHHHHHHHHHHHHccCCcccc------cc----ch--hhh----chh----hhhHHHH
Q 020441 73 --GG----STS--GTTLLFIVFLGVITLGTILMCFLRKEEDKG------EK----ET--ADA----SVN----FYSYLVS 124 (326)
Q Consensus 73 --~~----~~~--~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~------~~----~~--~~~----~~~----~~~~~~~ 124 (326)
.. +.| -|-.=|++..++.++..+..++.|+..+++ ++ ++ .++ +.. .....++
T Consensus 214 ~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 293 (539)
T PF03137_consen 214 GVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKKSFGKSIKD 293 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhcccccccccchhhhhhh
Confidence 00 111 244456555555555555555555432211 00 00 000 000 0123556
Q ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccch--hhHHHH-HHHHHHHHHHHhhhhhhccCCC
Q 020441 125 LSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAM-AVYGAFDAICSLAAGRLTTGLP 199 (326)
Q Consensus 125 ~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~-~~~gi~~~i~~~~~G~l~d~~g 199 (326)
..+.+.++++||-.++..-.........+= +..|.+.|.....+.+ ...++. .+.--+.++|.+++|.+.+|++
T Consensus 294 f~~~l~~Ll~Np~f~~~~la~~~~~~~~~G-~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~k 370 (539)
T PF03137_consen 294 FPKALKRLLTNPVFMCLILAGVFESFIVSG-FATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFK 370 (539)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred HHHHHHHHhcChHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEec
Confidence 666666677777665443221111111111 1345555666666654 221111 1111134466677777776653
No 207
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.02 E-value=2.5e-05 Score=73.80 Aligned_cols=123 Identities=18% Similarity=0.176 Sum_probs=85.3
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhcc----CCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCc-chHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVL-GTLYPL 236 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d----~~g~~~~i~~~g~i~~~~~~~~~~l~~~~-~~~~~-~~~~~~ 236 (326)
++.+|++ .++.++.+.-+..++..|+.|.++| |+|||+|.++.|.+...+.+++++ .-+| +.+.. .....+
T Consensus 29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf-~~~p~~~~~~~~~~~~~ 107 (428)
T PF13347_consen 29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF-SPPPAGLSFTAKLVWLF 107 (428)
T ss_pred HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh-ccccchhhhhhHHHHHH
Confidence 4445654 7788899999999999999999999 789887777788877776655433 1113 21110 112346
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCC--chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHD--TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~--~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
+..+++.++.+..+....++..++.+++ |....+.-+....+|..+...+.+
T Consensus 108 ~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 108 VFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred HHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 7778889999999999999999999864 333444556667777755444444
No 208
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=97.98 E-value=0.00067 Score=64.06 Aligned_cols=156 Identities=19% Similarity=0.195 Sum_probs=97.0
Q ss_pred cccccch--hhHHHHHHHHHHHHHHHhhhhhhccC----CCChhhHHHHHHHHHHHHHHHHHhcccCCCCC-cchHHHHH
Q 020441 165 TPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTG----LPSITFIVSGGAIAQVVVFLWILINYSVTSGV-LGTLYPLI 237 (326)
Q Consensus 165 ~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~----~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 237 (326)
++..|++ .+|.+..+.=+..++.-|+.|.+.|| +||++|-++.|.+-..+..++.+ ++|+.+. .....+++
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F--~~p~~~~~~k~~ya~v 117 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLF--ITPDFSMTGKLIYALV 117 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHH--cCCCcccCcchHHHHH
Confidence 3445655 67888888889999999999999985 67777777778766655544433 3443221 11245788
Q ss_pred HHHHHhhhhHHhhhhhHhhHHhhccCCch-hhhh-HHHHHHHHHHHHHHHHhh-hhh-------HHHHHHHHHHHHHHHH
Q 020441 238 MAALLGIGDGVLNTQLSALLGILFKHDTE-GAFA-QLKVWQCASIAVVFFIGP-YIS-------LQAMLIVMVVGICVAL 307 (326)
Q Consensus 238 ~~~l~G~~d~~~~~~~~~il~~~f~~~~~-~~fa-~~~~~~~~g~~i~~~i~~-~~~-------~~~~~~~~~~~~~~~~ 307 (326)
.+.+++++++..+..-.++.+++.+|.+| ...+ .-....++|..+..+..+ .+. ..........+.+++.
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 89999999999999999999999887543 2344 444444555455544442 332 1112222333344555
Q ss_pred HHHHHHHHHHhhccC
Q 020441 308 VGILFLTIQVEKAFY 322 (326)
Q Consensus 308 ~~~~~~~~~~~~~~~ 322 (326)
+.+++.-..++.+..
T Consensus 198 i~~l~~~~~v~ER~~ 212 (467)
T COG2211 198 ILLLFCFFNVKERVV 212 (467)
T ss_pred HHHHHHHHHhhcccC
Confidence 555554444444443
No 209
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.98 E-value=0.00025 Score=61.75 Aligned_cols=136 Identities=15% Similarity=0.080 Sum_probs=89.8
Q ss_pred HHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCC
Q 020441 152 QAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGV 229 (326)
Q Consensus 152 ~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~ 229 (326)
..|.++.|.+.+. +.+|.+ +...+.....++..+ +++.|.+.|+.|++ .+..+|++.....+....+.....-+-
T Consensus 17 t~Y~Fs~yS~~Lk-~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~-~~l~iG~~~~~~GY~~~~l~~~~~i~~ 93 (250)
T PF06813_consen 17 TTYTFSAYSPQLK-SRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW-VVLLIGAVLGFVGYGLLWLAVSGRIPS 93 (250)
T ss_pred cccchhhhhHHHH-HHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH-HHHHHHHHHHHHHHHHHHHHHhCccCc
Confidence 4555667766553 345554 455555566666655 58889999999998 477888888777665444322211100
Q ss_pred cchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 230 LGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 230 ~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...+...+..++-|.+.+..++.......+.||++|..+-++-+...++++++--.+...+
T Consensus 94 ~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 94 LPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred cchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHH
Confidence 0124444445566677777778777777799999998899999999999988865555433
No 210
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.98 E-value=9.4e-05 Score=69.96 Aligned_cols=57 Identities=21% Similarity=0.142 Sum_probs=43.0
Q ss_pred CchhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHh
Q 020441 1 MVPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVL 68 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~ 68 (326)
|+.+|++.|+|.|-.-. -=+|++.++. .+.|-|.++..-..+.+|.++|+.+...+.
T Consensus 133 mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~----------~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~ 189 (488)
T KOG2325|consen 133 MLVARILTGVGVGNFAV-LRAYIADAST----------VEDRPRAFAATSGGFVLGIILGPTIQLAFT 189 (488)
T ss_pred HHHHHHHcCcCcccHHH-HHHHHHhccC----------ccchHHHHHHhhhHHHHHHHHhHHHHHHHh
Confidence 46799999999765543 4567777666 357778888777777889999998887654
No 211
>PRK09952 shikimate transporter; Provisional
Probab=97.94 E-value=0.00057 Score=64.88 Aligned_cols=103 Identities=10% Similarity=-0.009 Sum_probs=67.6
Q ss_pred HHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc---hHHHHHHHHHHhhhhHHhhhhhHhhHH
Q 020441 182 AFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLG 258 (326)
Q Consensus 182 i~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~~~~~~il~ 258 (326)
++..+++++.|++.||+|||+ .+..+.++.....++ ..+.|+....+ +...++.-++.|++.+...+....++.
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~ 151 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKR-MLMLTVWMMGIATAL--IGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAV 151 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHH-HHHHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 446688899999999999996 666666555443322 23334321000 113455677889999998888889999
Q ss_pred hhccCCc-hhhhhHHHHHHHHHHHHHHHHh
Q 020441 259 ILFKHDT-EGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 259 ~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
|.+|+++ ....+.......+|..++..+.
T Consensus 152 e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~ 181 (438)
T PRK09952 152 ESAPKNKKAFYSSGVQVGYGVGLLLSTGLV 181 (438)
T ss_pred HhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999764 4444566666777766664443
No 212
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.91 E-value=0.00041 Score=65.58 Aligned_cols=115 Identities=13% Similarity=0.051 Sum_probs=89.8
Q ss_pred cccch--h-hHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 167 ALGVS--G-VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 167 ~lg~~--~-~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
.+|.+ + .|.+...+..+..+..++.|.+.||+|.|+ ++..+.+...+...+. .+..+ .....++-+++|
T Consensus 55 elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~-vL~l~~l~Wsl~t~L~--~fa~S-----l~~L~i~R~llG 126 (511)
T TIGR00806 55 VLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKP-VLVLQALSFVCVWLLL--LLGTS-----VWHMQLMEVFYS 126 (511)
T ss_pred HcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchH-HHHHHHHHHHHHHHHH--HHHHH-----HHHHHHHHHHHH
Confidence 44543 5 788888999999999999999999999985 7666665555443322 22222 245677789999
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
++.+... ..+.++...+|++ +..+.+..+....+|.+++..+.+.+
T Consensus 127 vaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 127 VTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988 8899999999976 56788999999999999999998764
No 213
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=97.90 E-value=0.002 Score=59.70 Aligned_cols=154 Identities=20% Similarity=0.179 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhc
Q 020441 145 FAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN 222 (326)
Q Consensus 145 ~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~ 222 (326)
.+..|.......+..++ ..+.+|++ ..|+....|+++..+++|+...+.||+.||+ +++....+....-+.. .
T Consensus 22 ~F~igttEfv~~gLLp~--iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~-lLl~~l~lFi~~n~l~--a 96 (394)
T COG2814 22 AFAIGTTEFVPVGLLPP--IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRR-LLLGLLALFIVSNLLS--A 96 (394)
T ss_pred HHHHHhHHHHHHhchHH--HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHH-HHHHHHHHHHHHHHHH--H
Confidence 33334333333344443 34456665 7899999999999999999999999999995 6554444333222221 2
Q ss_pred ccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHH----HHHHHHHhhhhhHHHHHH
Q 020441 223 YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCAS----IAVVFFIGPYISLQAMLI 297 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g----~~i~~~i~~~~~~~~~~~ 297 (326)
..|+ +....+.-++.|+..+.+-+...++..++.|++ +..+.+.-....+++ .=++-+++.++.+....+
T Consensus 97 lAp~-----f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~ 171 (394)
T COG2814 97 LAPS-----FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFL 171 (394)
T ss_pred Hhcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHH
Confidence 3455 466777789999999999999999999999876 455666555544444 444555555555555444
Q ss_pred HHHHHHHHHHH
Q 020441 298 VMVVGICVALV 308 (326)
Q Consensus 298 ~~~~~~~~~~~ 308 (326)
.+.++.++.++
T Consensus 172 ~ia~l~ll~~~ 182 (394)
T COG2814 172 AIAVLALLALL 182 (394)
T ss_pred HHHHHHHHHHH
Confidence 44444333333
No 214
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.89 E-value=5.2e-05 Score=69.22 Aligned_cols=136 Identities=13% Similarity=0.139 Sum_probs=100.5
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
++|++....++.+.+.+|+.|.+.||+|+|. -++.|.+......++ ..+.++ ++..++.-.+=|+++++..+
T Consensus 107 ~iG~LFaskA~~qllvnp~~G~l~~~iGy~i-pm~~Gl~vmf~sTil--Fafg~s-----y~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 107 QIGLLFASKALVQLLVNPFFGNLIDRIGYKI-PMVAGLFVMFLSTIL--FAFGNS-----YPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred chhHHHHHHHHHHHHhcccchhhHHHhcccc-HHHHHHHHHHHHHHH--HHHcch-----hHHHHHHHHHhhhhHHHHHh
Confidence 7899999999999999999999999999985 445555443322221 123333 35678888999999999999
Q ss_pred hhHhhHHhhccCCc--hhhhhHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHHHHHH-HHHHHH
Q 020441 252 QLSALLGILFKHDT--EGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGICVALVG-ILFLTI 315 (326)
Q Consensus 252 ~~~~il~~~f~~~~--~~~fa~~~~~~~~g~~i~~~i~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~ 315 (326)
.-.+++++.||++. ..+.++.-.+.++|.-+++-++..+. -+++..++..++++.... ++.++.
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p 249 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEP 249 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCc
Confidence 99999999999875 55788888888888888888777664 345667777665554443 444444
No 215
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.88 E-value=0.0067 Score=56.52 Aligned_cols=223 Identities=14% Similarity=0.071 Sum_probs=118.4
Q ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccc----cc----------
Q 020441 43 GSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GE---------- 108 (326)
Q Consensus 43 g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~----~~---------- 108 (326)
-|..|+.-+....|-.+|.+++-.+.... ....+.+..+-++...++.++.+|+|++++. ++
T Consensus 128 q~vts~~raa~l~g~~~s~~lgQllvs~~----~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~~~~~ 203 (412)
T PF01770_consen 128 QKVTSYTRAATLVGRFISSLLGQLLVSFG----GVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQDANES 203 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccccccc
Confidence 35567777777777777777776554322 1123334334444566778888999876431 00
Q ss_pred -cchh----hh-------ch----hhhhHHHHHHHHHHHhhcchhhHHHH--HHHHHHHHHHHHH-Hhhccccccccccc
Q 020441 109 -KETA----DA-------SV----NFYSYLVSLSKSITTLLADVRMLLII--PLFAYSGLQQAFV-WAEFTKEIVTPALG 169 (326)
Q Consensus 109 -~~~~----~~-------~~----~~~~~~~~~~k~~~~~~~~~~~lll~--p~~~~~g~~~~f~-~~~~~~~~~~~~lg 169 (326)
.++. +. +. .....+++..++..+..++|+.+.-. -.+-.+|..+.-. ....=+....+.-.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~ 283 (412)
T PF01770_consen 204 ESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNE 283 (412)
T ss_pred cccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCC
Confidence 0000 00 00 01112334444455555667765433 1122333322111 11110011111111
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
....|.+..+..+..++++...|++..++.+.. -+.++......+..+.++.+.++ .+..++.+++++......
T Consensus 284 ~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~-~l~l~~~S~l~a~~L~lm~~t~~-----Iwv~Y~~yIif~~~y~fl 357 (412)
T PF01770_consen 284 SVYNGAVEAASTLLGAIAALLAGYVKVNWDRWG-ELALGVFSLLQAGLLFLMSFTGN-----IWVCYAGYIIFRSLYMFL 357 (412)
T ss_pred cccchHHHHHHHHHHHHHHHHHhHhhcchHHHH-HHHHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHH
Confidence 236688888888888999999998855555442 22222222221111222344444 477889999999988888
Q ss_pred hhhhHhhHHhhccCCc-hhhhhHHHHH
Q 020441 250 NTQLSALLGILFKHDT-EGAFAQLKVW 275 (326)
Q Consensus 250 ~~~~~~il~~~f~~~~-~~~fa~~~~~ 275 (326)
.+....-+++...+++ +..|++..+.
T Consensus 358 iTiA~~qIA~~l~~e~yaLVFGiNtf~ 384 (412)
T PF01770_consen 358 ITIASFQIAKNLSEERYALVFGINTFV 384 (412)
T ss_pred HHHHHHHHHHhccccceeeeeeeHHHH
Confidence 8888888888777666 5577765553
No 216
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.86 E-value=0.0025 Score=60.09 Aligned_cols=306 Identities=13% Similarity=0.059 Sum_probs=156.6
Q ss_pred hHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhH
Q 020441 4 ASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLF 83 (326)
Q Consensus 4 a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f 83 (326)
+-++.++|.|+.=+...+.+.|.=+++ |.||-..+++||..-+.|..+++++...+.... +|..-|
T Consensus 123 ~L~~I~iG~Gl~K~NiS~llg~ly~~~--------DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~------g~~~gF 188 (498)
T COG3104 123 GLALIIVGTGLFKPNISSLLGELYPKD--------DPRRDGGFTLFYMGINIGSLIAPIITGLLAINY------GWHVGF 188 (498)
T ss_pred HHHHHHhccccccccHHHHHHHhcCCC--------CcccCCCccEEEEEeehHHHHHHHHHHHHHHhh------CHHHHH
Confidence 445556677776666666666655543 446788899999998999888888876664432 466667
Q ss_pred HHHHHHHHHHHHHHHHccCCccccc---c----chhh-h-----------chh-----hhh---------HHH---HHHH
Q 020441 84 IVFLGVITLGTILMCFLRKEEDKGE---K----ETAD-A-----------SVN-----FYS---------YLV---SLSK 127 (326)
Q Consensus 84 ~~~~~i~~l~~~l~~~l~~~~~~~~---~----~~~~-~-----------~~~-----~~~---------~~~---~~~k 127 (326)
....+-+.+|.+.+.+.|+..+... + ..++ . ... ... ... -.++
T Consensus 189 ~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~ 268 (498)
T COG3104 189 GLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFA 268 (498)
T ss_pred HHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6555445555566666664433211 0 0000 0 000 000 000 0011
Q ss_pred HHHHhh---cc-hhhHHHHHHHHHHHH-----HHHH-HHhhccccccccc-ccch-hhHHHHHHHHHHHHHHHhhhhhhc
Q 020441 128 SITTLL---AD-VRMLLIIPLFAYSGL-----QQAF-VWAEFTKEIVTPA-LGVS-GVGGAMAVYGAFDAICSLAAGRLT 195 (326)
Q Consensus 128 ~~~~~~---~~-~~~lll~p~~~~~g~-----~~~f-~~~~~~~~~~~~~-lg~~-~~~~~~~~~gi~~~i~~~~~G~l~ 195 (326)
++++.- .+ +|++..+|+++..-. ++.. ....|.....++. +|.+ ...+.-.+..+.-++.+|+.-++-
T Consensus 269 ~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~ 348 (498)
T COG3104 269 EAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALW 348 (498)
T ss_pred HHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHH
Confidence 111111 12 344445554433221 1111 1123333334444 4432 223334555555555555554432
Q ss_pred ----cC--CCChhhHHHHHHHHHHHHHHHHHh--cccCC-CCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-c
Q 020441 196 ----TG--LPSITFIVSGGAIAQVVVFLWILI--NYSVT-SGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-T 265 (326)
Q Consensus 196 ----d~--~g~~~~i~~~g~i~~~~~~~~~~l--~~~~~-~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~ 265 (326)
++ ..+.+.=+.+|..+....++.+.. .+..+ ++....++....+++.+++.=+..+.-.+...++-|+. .
T Consensus 349 ~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~ 428 (498)
T COG3104 349 TKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALK 428 (498)
T ss_pred hHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHH
Confidence 22 111111133444443333322111 11111 22222456677789999999999999999999999987 3
Q ss_pred hhhhhHHHHHHHHHHHHHHHHhhh-------hhH--HH-HHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 020441 266 EGAFAQLKVWQCASIAVVFFIGPY-------ISL--QA-MLIVMVVGICVALVGILFLTIQVEKAFYS 323 (326)
Q Consensus 266 ~~~fa~~~~~~~~g~~i~~~i~~~-------~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (326)
....|.+-+.++.|..++--+++. .+. +. ..+.+....+...+..+..+++.+|...+
T Consensus 429 s~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r~~~~ 496 (498)
T COG3104 429 SFIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNRMMKG 496 (498)
T ss_pred HHHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHHhhcC
Confidence 557888888888888887777762 221 11 12233333344444555556666665543
No 217
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.82 E-value=0.00063 Score=65.55 Aligned_cols=107 Identities=13% Similarity=-0.002 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcch---HHHHHHHHHHhhhhHHhhhhhH
Q 020441 178 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGT---LYPLIMAALLGIGDGVLNTQLS 254 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~l~G~~d~~~~~~~~ 254 (326)
.+.-++..++++++|++.||+|||+ ++..+.++..+..+. ....|+....+. ....+.-++.|++.+...+...
T Consensus 64 ~~~~l~~~ig~~~~G~l~Dr~Grr~-~l~~~~~l~~i~~~~--~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~ 140 (490)
T PRK10642 64 SVPFLIRPLGGLFFGMLGDKYGRQK-ILAITIVIMSISTFC--IGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGAS 140 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHH--HHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHH
Confidence 3444667889999999999999995 766666555544332 223343211001 1245667888999999999999
Q ss_pred hhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHh
Q 020441 255 ALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 255 ~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
+++.|.+|++ +....+.......+|..++..+.
T Consensus 141 ~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~ 174 (490)
T PRK10642 141 IFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVV 174 (490)
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 45455566666666666555443
No 218
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.82 E-value=0.00032 Score=68.05 Aligned_cols=111 Identities=13% Similarity=0.082 Sum_probs=88.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
+.+++.....++..+++++.|+++|++|||. .+.++.+...+..+... ..++ .....+.-++.|++.+..+.
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~-~l~~~~~~~~iG~ii~~--~a~~-----~~~l~~GR~l~G~g~G~~~~ 161 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKK-TLLLAVVLFLIGAIIIA--LAPS-----WYQLIVGRILTGLGVGGASV 161 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHH--Hhhh-----HHHHHHHHHHhccchhhhhh
Confidence 3478888999999999999999999999995 77777777666554332 3333 35677788999999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
..+.+++|..|.+ |..--+.+++...+|..+++.++...
T Consensus 162 ~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~ 201 (513)
T KOG0254|consen 162 LAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT 201 (513)
T ss_pred cchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 9999999999986 55445588888889999998887655
No 219
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.75 E-value=0.016 Score=50.63 Aligned_cols=199 Identities=15% Similarity=0.085 Sum_probs=103.8
Q ss_pred HHHHHHHHHHHhh-cchhhHHHHHHHHHHHHHHHHHHhhcccccccccccc--h--hhHHHHHHHHHHHHHHHhhhhhhc
Q 020441 121 YLVSLSKSITTLL-ADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV--S--GVGGAMAVYGAFDAICSLAAGRLT 195 (326)
Q Consensus 121 ~~~~~~k~~~~~~-~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~--~--~~~~~~~~~gi~~~i~~~~~G~l~ 195 (326)
.+..++|.-.+.+ .|.|..++. .+.+-++.+.+.-+| +-+.++.. + --|++...+-+..++|+-+..|+.
T Consensus 232 dlltqf~gaa~aiaSD~ki~LLG--~iqsLFE~smytFVF---LWTPaLspn~e~iPhGfiFatFMlASmLGSSla~Rl~ 306 (454)
T KOG4332|consen 232 DLLTQFKGAARAIASDEKIALLG--AIQSLFEGSMYTFVF---LWTPALSPNDEEIPHGFIFATFMLASMLGSSLASRLL 306 (454)
T ss_pred HHHHHhhHhHHHHhcchHHHHHH--HHHHHHhhhhheeee---eecccCCCCcccCCchhHHHHHHHHHHHhhHHHHHHH
Confidence 4455555555554 678877665 344444444443233 11233331 1 235666677777888888888886
Q ss_pred cCCCCh-hhHHHHHHHHHHHHH-HHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHH
Q 020441 196 TGLPSI-TFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQL 272 (326)
Q Consensus 196 d~~g~~-~~i~~~g~i~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~ 272 (326)
.|...| .+.+.+........+ +++ +....++....+...++...++-.+-+.+-+.+.-+=.++.|++ +......+
T Consensus 307 s~s~~~ve~ymqivf~vs~a~l~Lpi-lt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfF 385 (454)
T KOG4332|consen 307 SRSSPKVESYMQIVFLVSIAALLLPI-LTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFF 385 (454)
T ss_pred hcCCcccchHHHHHHHHHHHHHHHHH-HHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhhe
Confidence 554332 112222222222222 222 22111222223455666677777888888888888889999987 45566678
Q ss_pred HHHHHHHHHHHHHHh--hhh--hHHHHHHHHHHHHHHHHH----HHHHHHHHHhhccCCCC
Q 020441 273 KVWQCASIAVVFFIG--PYI--SLQAMLIVMVVGICVALV----GILFLTIQVEKAFYSPR 325 (326)
Q Consensus 273 ~~~~~~g~~i~~~i~--~~~--~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 325 (326)
|.=..+-.|++...- .-. +...+.-++...+..+.+ .+-.+|+..+|+++.+|
T Consensus 386 RvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~~L~~v~e~d~~~~~~~~~ 446 (454)
T KOG4332|consen 386 RVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQRRLMTVVEHDKERRVPWST 446 (454)
T ss_pred echhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHHHHHHhhhccHhhcCCCCc
Confidence 877777666665441 111 122333333333333322 33344555666665554
No 220
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.73 E-value=0.00072 Score=64.07 Aligned_cols=137 Identities=18% Similarity=0.105 Sum_probs=91.1
Q ss_pred chhhHHHHHHHHHHHHHHHhhhhhhccCCC--ChhhHHHHHHHHHHHHH-HHHHhcccCCCCCcchHHHHHHHHHHhhhh
Q 020441 170 VSGVGGAMAVYGAFDAICSLAAGRLTTGLP--SITFIVSGGAIAQVVVF-LWILINYSVTSGVLGTLYPLIMAALLGIGD 246 (326)
Q Consensus 170 ~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g--~~~~i~~~g~i~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d 246 (326)
.+..|++.....++.+++++++|..+.|.+ ++ |++ .+.+..++.- +...+.+.|+.. -++.++..++.|++.
T Consensus 70 ~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~-Pli-~s~ii~~~g~llY~~l~~~~~~~---~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 70 ATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKK-PLI-VSFLIAIIGNLLYLALAYVPNGV---KYLMLVARILTGVGV 144 (488)
T ss_pred cchhhHHHHHHHHHHHhcchhhcccccccCCccc-CHH-HHHHHHHHHHHHHHHHHhcccch---HHHHHHHHHHcCcCc
Confidence 346788899999999999999999987776 45 554 3444444322 221244545421 255677889999998
Q ss_pred HHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh-----------------HHHHHHHHHHHHHHHHHH
Q 020441 247 GVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS-----------------LQAMLIVMVVGICVALVG 309 (326)
Q Consensus 247 ~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~-----------------~~~~~~~~~~~~~~~~~~ 309 (326)
+........+-..-.+++|..+++.....+.+|..+++.+.+.++ ...+.|++..+.++..+.
T Consensus 145 ~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~ 224 (488)
T KOG2325|consen 145 GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVI 224 (488)
T ss_pred ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHH
Confidence 876555444444445677777888888888888888877776553 234667777777666554
Q ss_pred HH
Q 020441 310 IL 311 (326)
Q Consensus 310 ~~ 311 (326)
..
T Consensus 225 i~ 226 (488)
T KOG2325|consen 225 IL 226 (488)
T ss_pred HH
Confidence 44
No 221
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.72 E-value=0.00076 Score=63.66 Aligned_cols=117 Identities=9% Similarity=0.047 Sum_probs=63.4
Q ss_pred cccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhh
Q 020441 167 ALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGI 244 (326)
Q Consensus 167 ~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~ 244 (326)
.+|. +++|++...+.++..+++++.|+++||+|++++++..+.+...+...+ ..+.++ ++..++..++.|+
T Consensus 32 ~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~l~~~ 104 (418)
T TIGR00889 32 TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFF--AAQVTT-----PAGMFPVLLANSL 104 (418)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH--HHHhcC-----HHHHHHHHHHHHH
Confidence 3444 489999999999999999999999999865334655554444333222 122232 2334455555666
Q ss_pred hhHHhhhhhHhhHHhhcc-C--CchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 245 GDGVLNTQLSALLGILFK-H--DTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 245 ~d~~~~~~~~~il~~~f~-~--~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.+...+...++...... . +....+.--|.+-++|.+++..+...+
T Consensus 105 ~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l 153 (418)
T TIGR00889 105 AYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLL 153 (418)
T ss_pred HHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHh
Confidence 655444444333221111 0 001112222333345666666666544
No 222
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.70 E-value=0.00025 Score=70.53 Aligned_cols=120 Identities=17% Similarity=0.098 Sum_probs=85.7
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhc------ccCC-------------CC---
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILIN------YSVT-------------SG--- 228 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~------~~~~-------------~~--- 228 (326)
.+.|++...+-++..++.++.|.+.||.+|++ .+..|.++..+..++..+. +..+ .+
T Consensus 68 ~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~-~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~ 146 (633)
T TIGR00805 68 SSSGLINGSYEIGNLLLIIFVSYFGTKLHRPI-VIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCM 146 (633)
T ss_pred CcceeeeehhhHHHHHHHHHHHHhhcccCcce-EEEecHHHHHHHHHHHhChHHhcCCcccccccccccccccccccccc
Confidence 36788888999999999999999999999885 5555554444332211110 0000 00
Q ss_pred ----------------------CcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHH
Q 020441 229 ----------------------VLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFF 285 (326)
Q Consensus 229 ----------------------~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~ 285 (326)
...+..+++.-++.|++.+...+...+++.+.+|++ +....+++.....+|.++++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~l 226 (633)
T TIGR00805 147 ENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYL 226 (633)
T ss_pred CCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHH
Confidence 000123456788999999999999999999999876 466888999999999999999
Q ss_pred Hhhhhh
Q 020441 286 IGPYIS 291 (326)
Q Consensus 286 i~~~~~ 291 (326)
++..+.
T Consensus 227 lgg~l~ 232 (633)
T TIGR00805 227 LGSFCL 232 (633)
T ss_pred HHHHHH
Confidence 887553
No 223
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.69 E-value=0.0021 Score=59.33 Aligned_cols=146 Identities=17% Similarity=0.148 Sum_probs=94.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHH
Q 020441 136 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQV 213 (326)
Q Consensus 136 ~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~ 213 (326)
+|.+.+....+..++..=+.++.....+ .+..|.+ +.+++..+-.+...+...+.|.+.||+|.|+ ......++.+
T Consensus 13 ~~~L~~S~~af~v~F~VW~l~s~l~~~i-~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~-~~~~s~~l~~ 90 (417)
T COG2223 13 RRNLWLSTLAFDVGFMVWTLFSPLGVFI-KSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRK-WTILSMLLLL 90 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhh-ccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchH-HHHHHHHHHH
Confidence 4445555455555555434444433222 2455554 7888888888889999999999999999986 5554444433
Q ss_pred HHHH-HHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 214 VVFL-WILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 214 ~~~~-~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+-.+ +.+....++ ++..+++.++.|++-+.+... ....++.||+++ ..+.+++- .-++|.++..++.|.+
T Consensus 91 IP~~~~~~a~~~~~-----~~~ll~~gll~G~~GasFav~-m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v 162 (417)
T COG2223 91 IPCLGLAFAVTYPS-----TWQLLVIGLLLGLAGASFAVG-MPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLV 162 (417)
T ss_pred HHHHHHHHHccCCc-----hHHHHHHHHHHhcccceehcc-cccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHH
Confidence 2111 111122222 256788889999988876544 356678899875 66777887 8888888888888766
No 224
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.64 E-value=0.0028 Score=58.24 Aligned_cols=116 Identities=16% Similarity=0.066 Sum_probs=86.1
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
.+.+.+-.++-.+..+.+...|++.||+|.|+ -++.|..+.++...+ .|+ .+...++...++..+.+|.|-+..|
T Consensus 48 ~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~-gi~lgL~l~avg~~l---F~p-Aa~~~~y~~FL~~lFila~Gi~~Le 122 (422)
T COG0738 48 FEASLIQFAFFGGYFIMSLPAGLLIKKLGYKA-GIVLGLLLYAVGAAL---FWP-AASSKSYGFFLVALFILASGIGLLE 122 (422)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHhhhHH-HHHHHHHHHHHHHHH---Hhh-hhhhhhHHHHHHHHHHHHhhhHHHH
Confidence 36677777777788899999999999999885 566777666644322 221 1111123445666788899999999
Q ss_pred hhhHhhHHhhccCCch-hhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 251 TQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 251 ~~~~~il~~~f~~~~~-~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+..+.+++.+.|++.+ .-...-+.+.++|+.+++.+.+++-
T Consensus 123 taaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~li 164 (422)
T COG0738 123 TAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLI 164 (422)
T ss_pred hccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 9999999999988653 3567888999999999999887653
No 225
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.0011 Score=64.47 Aligned_cols=112 Identities=13% Similarity=-0.014 Sum_probs=81.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
.......++-++..+|+.++|.++||+|||+ ++..+.++..++-+. ..+.++ +....+.-++-|++.+...+
T Consensus 119 ~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~-~~~~~~~~~~i~~~~--~a~a~~-----~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 119 LVALGQSLFFLGVLVGSLIFGPLSDRFGRKP-VLLVSLLLFIIFGIL--TAFAPN-----YWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred HHHHHHHHHHHHHHHHHhhheehHhhcccHH-HHHHHHHHHHHHHHH--HHHhCc-----HHHHHHHHHHHHhhccchhH
Confidence 4556677788889999999999999999995 777777666654432 234454 46678888999999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhhH
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISL 292 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~~ 292 (326)
..+.++.|+++++ |..+.+. ......+..+++....++..
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~ 231 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR 231 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh
Confidence 9999999999766 4444445 55555555555555555543
No 226
>PRK15075 citrate-proton symporter; Provisional
Probab=97.61 E-value=0.0013 Score=62.29 Aligned_cols=101 Identities=14% Similarity=0.061 Sum_probs=65.7
Q ss_pred HHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcc---hHHHHHHHHHHhhhhHHhhhhhHhhHHhhc
Q 020441 185 AICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLG---TLYPLIMAALLGIGDGVLNTQLSALLGILF 261 (326)
Q Consensus 185 ~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~l~G~~d~~~~~~~~~il~~~f 261 (326)
.+++++.|++.||+|||+ ++..+.++.....+. ..+.++....+ +...++.-++.|++.+...+....++.|.+
T Consensus 70 ~ig~~~~G~l~Dr~Grr~-~l~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 146 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRK-GLIVTLSIMASGTLL--IAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIA 146 (434)
T ss_pred hhHHHHHHHHhhhhchHH-HHHHHHHHHHHHHHH--HHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhC
Confidence 467889999999999996 666666554433322 22333310000 012355567889999988887889999999
Q ss_pred cCC-chhhhhHHHHHHHHHHHHHHHHhh
Q 020441 262 KHD-TEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 262 ~~~-~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
|++ |..+.+.+.....+|..++..+..
T Consensus 147 p~~~rg~~~~~~~~~~~~g~~~g~~~g~ 174 (434)
T PRK15075 147 TPGRKGFYTSWQSASQQVAVVFAALLGY 174 (434)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 866 566777777766666655555443
No 227
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=97.56 E-value=0.0035 Score=58.79 Aligned_cols=107 Identities=10% Similarity=0.132 Sum_probs=73.6
Q ss_pred cchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHH
Q 020441 169 GVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGV 248 (326)
Q Consensus 169 g~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~ 248 (326)
...++|.++.+..+..++..+++|.++||.++++.++.+..+........ ....++ ++..+.+.+++.+....
T Consensus 35 s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~--~~~~~~-----f~~~~~~~~l~~~~~~p 107 (400)
T PF03825_consen 35 SGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLL--LAFSSS-----FWWLFVIMLLFSFFFSP 107 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH--HHHhcc-----HHHHHHHHHHHHHHHcc
Confidence 34589999999999999999999999999865444544433333332211 122222 35556667777777777
Q ss_pred hhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHH
Q 020441 249 LNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVV 283 (326)
Q Consensus 249 ~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~ 283 (326)
..+...++.-+.-+++ ..-|+-.|.+-++|-.++
T Consensus 108 ~~pl~dsi~~~~~~~~-~~~YG~iRlwGSiGf~~~ 141 (400)
T PF03825_consen 108 TMPLSDSIALSYLGDR-GKDYGRIRLWGSIGFIVA 141 (400)
T ss_pred HHHHHHHHHHHHcccc-cCCCCcchhhhhHHHHHH
Confidence 7777777776666644 336999999999998877
No 228
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.53 E-value=0.017 Score=52.60 Aligned_cols=87 Identities=16% Similarity=-0.058 Sum_probs=60.6
Q ss_pred ccccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhh
Q 020441 166 PALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIG 245 (326)
Q Consensus 166 ~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~ 245 (326)
..+..+++.....+.-....+.+++.|.+.||+|||+ .-+.-.+++....+. ...++ +..+++--++-|++
T Consensus 64 yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~-~cl~~cily~~scl~---k~~~~-----~~~L~~GRvlgGia 134 (354)
T PF05631_consen 64 YGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKK-ACLLFCILYSLSCLT---KHSSN-----YPVLLLGRVLGGIA 134 (354)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchH-HHHHHHHHHHHHHHH---Hhccc-----cHHHHHHHHHHHHH
Confidence 3445567888888877888899999999999999996 444445555544322 22233 35567777888999
Q ss_pred hHHhhh-hhHhhHHhhc
Q 020441 246 DGVLNT-QLSALLGILF 261 (326)
Q Consensus 246 d~~~~~-~~~~il~~~f 261 (326)
.+...+ .-.|++.|+-
T Consensus 135 TSLLfS~FEsW~V~Eh~ 151 (354)
T PF05631_consen 135 TSLLFSAFESWMVHEHN 151 (354)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 888775 5567777763
No 229
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=97.47 E-value=0.00064 Score=63.39 Aligned_cols=124 Identities=13% Similarity=0.124 Sum_probs=68.7
Q ss_pred cccccccc--hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHH-HHHHHHHHhcccC---CCCCcchHHHH
Q 020441 163 IVTPALGV--SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQ-VVVFLWILINYSV---TSGVLGTLYPL 236 (326)
Q Consensus 163 ~~~~~lg~--~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~-~~~~~~~~l~~~~---~~~~~~~~~~~ 236 (326)
|.++..|. +++|.+..+..+...+.+|+.|.+.||.+.|+.++..-.++. +....+.+ .+.| .+ . ....+
T Consensus 33 WL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~-v~~pll~~n-~--~lg~i 108 (412)
T PF01306_consen 33 WLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIY-VFGPLLQSN-F--WLGAI 108 (412)
T ss_dssp HHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHH-THHHHHHTT----HHHHH
T ss_pred HHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-H--HHHHH
Confidence 44444455 489999999999999999999999999985544433222221 11111111 1111 10 0 11223
Q ss_pred HHHHHHhhhhHHhhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 237 IMAALLGIGDGVLNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 237 ~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+..+.+|+......+..-++..+... +..--|+=-|.+-|+|.+++-.+...+-
T Consensus 109 ig~i~l~~~f~~~~~~~Ea~~er~sr-~~~feYG~~R~wGSig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 109 IGGIYLGLVFNAGVPLSEAYAERVSR-RNGFEYGRARMWGSIGFAIASLLAGILF 162 (412)
T ss_dssp HTTTTTTTTTTTHHHHHHHHHHHHHH-HHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccchHHHHHHHHHHH-HhcCCcchHHHHhhHHHHHHHHHhheee
Confidence 33344455444444444444433222 1122478899999999999988887663
No 230
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=97.41 E-value=0.031 Score=50.58 Aligned_cols=222 Identities=16% Similarity=0.158 Sum_probs=115.4
Q ss_pred cchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHHHHHccCCccc----cccch----
Q 020441 40 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTILMCFLRKEEDK----GEKET---- 111 (326)
Q Consensus 40 ~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~----~~~~~---- 111 (326)
++.-|..|.-.+..-.|-..|...+-.+...+. .+.+.+=.+-++...++..+++|+|+++++ .++++
T Consensus 126 ~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~----~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~~~~~~~~v~ 201 (433)
T KOG3810|consen 126 EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLET----LSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFHRLEDKISVG 201 (433)
T ss_pred HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcc----cchhhhchhhHHHHHHHHHHHhhCCCCchhhhhhcccccceec
Confidence 456677777777777777777766655543221 111111122234566777889999987632 01110
Q ss_pred -hhh---chhhhhHHHHHHHHH----HHhhcchhhHHHH--HHHHHHHHHHHHHHhhccccc----ccccccchhhHHHH
Q 020441 112 -ADA---SVNFYSYLVSLSKSI----TTLLADVRMLLII--PLFAYSGLQQAFVWAEFTKEI----VTPALGVSGVGGAM 177 (326)
Q Consensus 112 -~~~---~~~~~~~~~~~~k~~----~~~~~~~~~lll~--p~~~~~g~~~~f~~~~~~~~~----~~~~lg~~~~~~~~ 177 (326)
-|+ +.+.....++.++.+ ...-++|+.+.=. -.+-.+|+.+.-. |++.+ ..+.. ..+.|.+.
T Consensus 202 ~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~n---Y~Q~LW~~~~~~~~-~vyNG~ve 277 (433)
T KOG3810|consen 202 DLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTN---YTQILWKEVAPNPA-NVYNGAVE 277 (433)
T ss_pred cchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHH---HHHHHHHhhCCCch-hhhcCHHH
Confidence 011 001111112222222 2334556654322 1122223322211 11111 01110 11446667
Q ss_pred HHHHHHHHHHHhhhhhhccCCCCh-hhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhh
Q 020441 178 AVYGAFDAICSLAAGRLTTGLPSI-TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 256 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d~~g~~-~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~i 256 (326)
.+.-+..++.++..|.+.-++.|. ..++.++...++.+.+ .+.++.+ .+.+++.++++...+....+....-
T Consensus 278 Av~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf--~m~~t~~-----Iw~~Ya~yvlfr~~y~l~itiA~~~ 350 (433)
T KOG3810|consen 278 AVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLF--IMAQTQH-----IWVCYAGYVLFRVIYQLTITIATFQ 350 (433)
T ss_pred HHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhh--hhhcccc-----eehhhhhHHHHHhhHhhhhhHHHHH
Confidence 777777788888889876444433 2344555555554332 2455554 4778999999988888888888788
Q ss_pred HHhhccCCc-hhhhhHHHHHH
Q 020441 257 LGILFKHDT-EGAFAQLKVWQ 276 (326)
Q Consensus 257 l~~~f~~~~-~~~fa~~~~~~ 276 (326)
+++...+++ +..|++..+.-
T Consensus 351 iA~nL~~e~~gLvFGiNTFvA 371 (433)
T KOG3810|consen 351 IARNLSSELFGLVFGINTFVA 371 (433)
T ss_pred HHHhhhhhhheeeeehHHHHH
Confidence 877776665 55788666543
No 231
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.41 E-value=0.062 Score=51.35 Aligned_cols=253 Identities=16% Similarity=0.127 Sum_probs=135.2
Q ss_pred hhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHH
Q 020441 13 SIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITL 92 (326)
Q Consensus 13 g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l 92 (326)
+..+....+|+++.++ +++|....|+..+.+..+..+|++++....+... ...+|.+-.+...+
T Consensus 127 ~~~~s~~~a~vadis~----------~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~------~a~~f~ia~~~~~~ 190 (463)
T KOG2816|consen 127 SAIFSVGFAYVADISS----------EEERSSSIGLLSGTFGAGLVIGPALGGYLVKFLG------IALVFLIAAASGIL 190 (463)
T ss_pred hhhhhhhhhheeeccc----------hhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcC------chHHHHHHHHHHHH
Confidence 3455556666766666 5689999999999899999999999987765421 22334444434444
Q ss_pred HHHH-HHHccCCccccccc-hh--hh--chhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccc
Q 020441 93 GTIL-MCFLRKEEDKGEKE-TA--DA--SVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTP 166 (326)
Q Consensus 93 ~~~l-~~~l~~~~~~~~~~-~~--~~--~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~ 166 (326)
+.+. .+++|.+.+|++++ .. +. .........+..+...+.-.+|+.+.+.+..++.-.-..--.......|...
T Consensus 191 ~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~ 270 (463)
T KOG2816|consen 191 SLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKA 270 (463)
T ss_pred HHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEee
Confidence 4333 35566655543321 00 00 0000111122233333322344444444333322211110001000111112
Q ss_pred ccc--chhhHHHHHHHHHHHHHHHhhhh-hhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHh
Q 020441 167 ALG--VSGVGGAMAVYGAFDAICSLAAG-RLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLG 243 (326)
Q Consensus 167 ~lg--~~~~~~~~~~~gi~~~i~~~~~G-~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G 243 (326)
..+ .+..+......++...++..+.. .+...++-++ ++..|.........+.-..+.+ +..+...+ ..
T Consensus 271 ~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~-~i~lGl~~~~~~~~~~af~~~~-------w~~~~~~v-~~ 341 (463)
T KOG2816|consen 271 KFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKR-LISLGLLSEFLQLLLFAFATET-------WMMFAAGV-VV 341 (463)
T ss_pred ecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HhhHHHHHHHHHHHHHHHhccc-------hhhhHHHH-HH
Confidence 223 34556556666667777777666 4444455554 6677777766554332223322 33343333 34
Q ss_pred hhhHHhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 244 IGDGVLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 244 ~~d~~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.......+...++.+.+.+.+ +..++++....+++...++..+-..+
T Consensus 342 ~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i 389 (463)
T KOG2816|consen 342 ALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNI 389 (463)
T ss_pred HhhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHH
Confidence 445566777888888887544 56789999999999888887776544
No 232
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.33 E-value=0.0025 Score=60.86 Aligned_cols=134 Identities=12% Similarity=0.113 Sum_probs=89.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
+-+++...+..+.+++....|.+.||+|.|+ ++..+.++..+..++..+..+-+ ++..+++-++-|++++...+
T Consensus 74 ~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~-v~~~~~~~sa~~t~l~P~aa~~~-----~~~~~~~R~lqGl~~g~~~p 147 (466)
T KOG2532|consen 74 EKGLIFSSFFWGYILGQIPGGYLADKFGARR-VFFISGLISALLTLLTPLAASIG-----FYLLLVLRFLQGLGQGVLFP 147 (466)
T ss_pred HHHHHHHHHHHHHHHHHcCcHHHHHHcCchH-HHHHHHHHHHHHHHHHHHHHHhc-----chhhHHHHHHhHHHHhHHHh
Confidence 4566677777788899999999999999985 66555555443333222221111 23457788999999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHH
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS-----LQAMLIVMVVGICVALVGIL 311 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~ 311 (326)
.+..+.++..|.+ +....++.-....+|..++.-++.+++ .....|+..++.++-.+.++
T Consensus 148 a~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~ 213 (466)
T KOG2532|consen 148 AIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWF 213 (466)
T ss_pred hhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHH
Confidence 9999999999865 455566666666777777777776665 33334444444444333333
No 233
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=97.32 E-value=0.019 Score=53.37 Aligned_cols=61 Identities=5% Similarity=-0.029 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHhhcccccccccccchhhHHHH--HHHHHHHHHHHhhhhh-hccCCCChhhHH
Q 020441 144 LFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAM--AVYGAFDAICSLAAGR-LTTGLPSITFIV 205 (326)
Q Consensus 144 ~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~--~~~gi~~~i~~~~~G~-l~d~~g~~~~i~ 205 (326)
+.+.+|...++.....+.-+.+..+..+++|+.. .+..+...+.+|+.++ ..||.|||+ .+
T Consensus 9 ly~~~g~~~~~~~p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~-~~ 72 (390)
T TIGR02718 9 LYLSQGIPIGLAMDALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRR-SW 72 (390)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcch-hH
Confidence 4455666655555444432223233344777753 4557778888999966 689999885 44
No 234
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=97.32 E-value=0.0071 Score=56.61 Aligned_cols=116 Identities=16% Similarity=0.020 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..+.+.....++.++|++++|.+.||+|||+ ++....+...++.+..-+....+++..-.+.++.--+++|+|-+.=++
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~-vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDKFGRKK-VYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchh-hhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCc
Confidence 4467778888899999999999999999995 765554444433332112222222110113345556789999999888
Q ss_pred hhHhhHHhhccCCc-hh----hhhHHHHHHHHHHHHHHHHhh
Q 020441 252 QLSALLGILFKHDT-EG----AFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 252 ~~~~il~~~f~~~~-~~----~fa~~~~~~~~g~~i~~~i~~ 288 (326)
.-.++.+|...+++ .. .|+...+.+-.|+.++-.+..
T Consensus 164 lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~ 205 (538)
T KOG0252|consen 164 LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSA 205 (538)
T ss_pred chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHH
Confidence 88889988877653 32 477777777777777777664
No 235
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.29 E-value=0.024 Score=51.65 Aligned_cols=173 Identities=13% Similarity=0.068 Sum_probs=85.2
Q ss_pred CchhHHhhhhhhhhhhcc-ccceecccchhhhhhcCCCcCcchhhhhHHHHHHH----HHhHHHHHHHHHHHhcCCCCCC
Q 020441 1 MVPASLYLGFAASIIWVG-EGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF----ASHQFVGNLITLAVLKDDKGGS 75 (326)
Q Consensus 1 li~a~~l~G~~~g~~w~a-~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~----~~~~iiG~li~~~~~~~~~~~~ 75 (326)
|+.+|++.|++.++++++ +.=+++||.+++.+ ++..+ ..|+... ....+..++++-.+....+
T Consensus 124 L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~------~~~L~---~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~--- 191 (354)
T PF05631_consen 124 LLLGRVLGGIATSLLFSAFESWMVHEHNKRGFP------QEWLS---DTFSLATFFGNGVVAIGAGVVANVLADWFG--- 191 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC------hHHHH---HHHHHHHHHHhHHHHHHHhHHHHHHHHHhC---
Confidence 468999999999999987 66677887554211 11222 2333111 2234444555543322111
Q ss_pred CCCchhhHHHHHHHHHHHHHHHHHccCCccccccchhhhchhhhhHHHHHHHHHHHh-hcchhhHHHHHHHHHHHHHHHH
Q 020441 76 TSGTTLLFIVFLGVITLGTILMCFLRKEEDKGEKETADASVNFYSYLVSLSKSITTL-LADVRMLLIIPLFAYSGLQQAF 154 (326)
Q Consensus 76 ~~~~~~~f~~~~~i~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~lll~p~~~~~g~~~~f 154 (326)
.|...||..-..+..++.++... .-+++..+. ++ +.+.++.+++-++. ++|||.+++. ...+-++.+.
T Consensus 192 -~g~vaPF~~a~~~l~~~~~~I~~--~W~ENyg~~-~~-----~~~~~~~~~~a~~~i~~d~ril~LG--~~qslFE~sm 260 (354)
T PF05631_consen 192 -FGPVAPFDAAIVLLAVAAVLILK--TWPENYGDT-SS-----SSSLSGSFREAWRAILSDPRILLLG--LIQSLFEGSM 260 (354)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHh--cccccCCCc-cc-----ccchHHHHHHHHHHHHcCchhHHHH--HHHHHHHHHH
Confidence 12345676544333333332221 111111110 00 11222233333333 4679987765 4444455554
Q ss_pred HHhhc--ccccccccccchhhHHHHHHHHHHHHHHHhhhhhhccC
Q 020441 155 VWAEF--TKEIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTTG 197 (326)
Q Consensus 155 ~~~~~--~~~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~ 197 (326)
+.-+| ++.+..+.-++ --|++...+-++.++|+-+..++..+
T Consensus 261 y~FVflWtPaL~~~~~~~-P~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 261 YLFVFLWTPALDPDDEEL-PLGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHheeeeeceecCCCCCC-CchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 44333 34333111111 34677888888889999999776543
No 236
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.25 E-value=0.0068 Score=57.81 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhh
Q 020441 177 MAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSAL 256 (326)
Q Consensus 177 ~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~i 256 (326)
..++-++.++|+.+.|.+.||+|||+ .+.+..++.....++.......+. +....+.-++.|+..+......+-.
T Consensus 66 vs~f~iG~~~Gs~~~~~la~~~GRK~-~l~~~~~l~~~~~~~~~~s~~~~~----~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 66 VSIFFIGGMIGSFSSGLLADRFGRKN-ALLLSNLLAVLAALLMGLSKSAPS----FEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 45677788999999999999999995 555554444433222222222221 2455666789999999999999999
Q ss_pred HHhhccCCchhhhh-HHHHHHHHHHHHHHHHh
Q 020441 257 LGILFKHDTEGAFA-QLKVWQCASIAVVFFIG 287 (326)
Q Consensus 257 l~~~f~~~~~~~fa-~~~~~~~~g~~i~~~i~ 287 (326)
++|..|++.....+ ...+.-++|..++..++
T Consensus 141 l~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~ 172 (485)
T KOG0569|consen 141 LTEISPKNLRGALGTLLQIGVVIGILLGQVLG 172 (485)
T ss_pred HhhcChhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 99999988433455 88888888888886665
No 237
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.16 E-value=0.024 Score=52.50 Aligned_cols=103 Identities=21% Similarity=0.135 Sum_probs=64.1
Q ss_pred HHHHhhhhhhccCCC-----ChhhHHHHHHHHHHHHHHH-----HHhcc--cC--CCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 185 AICSLAAGRLTTGLP-----SITFIVSGGAIAQVVVFLW-----ILINY--SV--TSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 185 ~i~~~~~G~l~d~~g-----~~~~i~~~g~i~~~~~~~~-----~~l~~--~~--~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
....+.+|..+|+.+ ||.|-+..|..+....... ..+.- .+ .+.+.+.....+.+.++|++-+..+
T Consensus 28 ap~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 28 APLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 456888999999988 7866666676655432211 11211 01 1112222346777889999999999
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHh
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~ 287 (326)
+...+++.+..|++ |..+.++--.-.-+|..++-.+.
T Consensus 108 T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~ 145 (403)
T PF03209_consen 108 TSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVF 145 (403)
T ss_pred HHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999876 45566633333334544444444
No 238
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.02 E-value=0.033 Score=50.71 Aligned_cols=111 Identities=14% Similarity=0.006 Sum_probs=83.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..|+...+=.++..+.+++..++.+|+|.++ .+..+.++...... .-...+ ....+.-..+.|++-+..|.
T Consensus 48 ~aGlLTtLPll~fg~~ap~a~~Lar~~g~er-~l~~~Llli~~G~~--iR~~~~------~~~L~~gt~l~G~gIav~nV 118 (395)
T COG2807 48 VAGLLTTLPLLAFGLFAPAAPRLARRFGEER-SLFLALLLIAAGIL--IRSLGG------LPLLFLGTLLAGAGIAVINV 118 (395)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhhHH-HHHHHHHHHHHHHH--HHhccc------HHHHHHHHHHHHhhHHHHHH
Confidence 5667677777777888999999999999874 55555544433322 123332 25577888999999999999
Q ss_pred hhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 252 QLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 252 ~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
.++.++-+.||++.....+.|....++|++.+...+.-+.
T Consensus 119 LLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla 158 (395)
T COG2807 119 LLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLA 158 (395)
T ss_pred hhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHH
Confidence 9999999999998876777999888888888877775443
No 239
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=97.00 E-value=0.0081 Score=57.27 Aligned_cols=185 Identities=14% Similarity=0.134 Sum_probs=112.5
Q ss_pred HHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccccccccccc-ch-hhHHHHHHHHHHHHHHHhhhhhhccCCCCh
Q 020441 124 SLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALG-VS-GVGGAMAVYGAFDAICSLAAGRLTTGLPSI 201 (326)
Q Consensus 124 ~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg-~~-~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~ 201 (326)
...++..+++.++..++........|...++.++.+ -+-.+.++ .+ --|.+.++.-.++++.-++.+|+.+|+|+.
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFL--fWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv 436 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFL--FWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV 436 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHH--HHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc
Confidence 344555588889888877767777787766654322 01111222 11 123334455556777788889999999988
Q ss_pred hhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chhhhhHH-----HHH
Q 020441 202 TFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEGAFAQL-----KVW 275 (326)
Q Consensus 202 ~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~~fa~~-----~~~ 275 (326)
+ ++.++......=++ ++++-.++ |..+.+-++=|+..+.....+-+.++...|.+ ++++=++. -+.
T Consensus 437 ~-v~~lgLa~~~~Rf~--~~S~L~n~-----W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG 508 (618)
T KOG3762|consen 437 N-VMYLGLACNVGRFL--YYSYLQNP-----WMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLG 508 (618)
T ss_pred c-eeeehhhHHHHHHH--HHHHhcCc-----hheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccC
Confidence 6 76666555443332 33444442 66666778888888888888888888888876 44444433 233
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 020441 276 QCASIAVVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVE 318 (326)
Q Consensus 276 ~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (326)
-++|+.|+.....++.......+..+.+++.++.+..+.+..+
T Consensus 509 ~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq~~l~ 551 (618)
T KOG3762|consen 509 KGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQLLLK 551 (618)
T ss_pred cchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 4777777777777665544444444445555555555544433
No 240
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=96.95 E-value=0.0021 Score=49.65 Aligned_cols=82 Identities=18% Similarity=0.162 Sum_probs=62.3
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLL 82 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~ 82 (326)
..+++.|++.+..++....++.|..| +++|++..|+.....+.+..+|+.+...+.. ..+|+..
T Consensus 56 ~~~~~~g~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~~~~~~~ 119 (141)
T TIGR00880 56 IARFLQGFGAAFALVAGAALIADIYP----------PEERGVALGLMSAGIALGPLLGPPLGGVLAQ------FLGWRAP 119 (141)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHCC----------hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhc------ccchHHH
Confidence 46789999999999888888888888 4589999999999999999999988876643 2357766
Q ss_pred HHHHHHHHHHHHHHHHHc
Q 020441 83 FIVFLGVITLGTILMCFL 100 (326)
Q Consensus 83 f~~~~~i~~l~~~l~~~l 100 (326)
|.+...+..++.+...++
T Consensus 120 ~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 120 FLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 766655555555554444
No 241
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.94 E-value=0.4 Score=45.94 Aligned_cols=160 Identities=12% Similarity=0.031 Sum_probs=77.9
Q ss_pred CcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCC--CCCCCc--hh--hHHHHHHHHHHHHHHHHHccCCcccccc---
Q 020441 39 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKG--GSTSGT--TL--LFIVFLGVITLGTILMCFLRKEEDKGEK--- 109 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~--~~~~~~--~~--~f~~~~~i~~l~~~l~~~l~~~~~~~~~--- 109 (326)
+++-.|+++++....++|.++|+.+...+.+..+. .....| .. +..+..+++.+...+..++.+...+.++
T Consensus 160 ~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~ 239 (472)
T TIGR00769 160 IDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYN 239 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccc
Confidence 34567899999999999999999887665432111 111223 21 1221121222222333344322111110
Q ss_pred -chhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc----ccccccccchhhHHHHHHHHHHH
Q 020441 110 -ETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK----EIVTPALGVSGVGGAMAVYGAFD 184 (326)
Q Consensus 110 -~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~----~~~~~~lg~~~~~~~~~~~gi~~ 184 (326)
++++++++++.+++|.+|. ++++|-.+.+.-+.+..|....+....+-. .+.++.---...|......|+..
T Consensus 240 ~~~~~~k~k~k~~~~es~k~---i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~t 316 (472)
T TIGR00769 240 PALKEKKVKPKMSTMESLKF---LVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVS 316 (472)
T ss_pred hhhccccCCCCCCHHHHHHH---HHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 1011111224456665554 456777776665555555554444332211 11010000113344455666677
Q ss_pred HHHHhhhhhhccCCCCh
Q 020441 185 AICSLAAGRLTTGLPSI 201 (326)
Q Consensus 185 ~i~~~~~G~l~d~~g~~ 201 (326)
.+...+.+++.+|+|=+
T Consensus 317 l~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 317 VTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHhhHH
Confidence 67777778888887744
No 242
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=96.85 E-value=0.49 Score=45.56 Aligned_cols=159 Identities=14% Similarity=0.017 Sum_probs=77.0
Q ss_pred cchhhhhHHHHHHHHHhHHHHHHHHHHHhc-CCC--CCCCCCchhhHH-HHHHHHHHHHHHH---HHccCCccc--c--c
Q 020441 40 TVIGSFNGEFWGMFASHQFVGNLITLAVLK-DDK--GGSTSGTTLLFI-VFLGVITLGTILM---CFLRKEEDK--G--E 108 (326)
Q Consensus 40 ~~~g~~~gif~~~~~~~~iiG~li~~~~~~-~~~--~~~~~~~~~~f~-~~~~i~~l~~~l~---~~l~~~~~~--~--~ 108 (326)
++-.|+.+.+....++|.++|+-+...+.. ..+ ......|..... .+..+.+.+.++. .++.+...+ + +
T Consensus 176 ~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~ 255 (491)
T PF03219_consen 176 EEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYP 255 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccch
Confidence 355688898988889999988888777655 111 111122322221 1222222332222 233321111 1 1
Q ss_pred cchhhhchhhhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhc----ccccccccccchhhHHHHHHHHHHH
Q 020441 109 KETADASVNFYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEF----TKEIVTPALGVSGVGGAMAVYGAFD 184 (326)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~----~~~~~~~~lg~~~~~~~~~~~gi~~ 184 (326)
+++.+++++++.+++|.+|. ++++|-...+.-+.+..|......-..+ -..+.++.-..+..|-.....|+..
T Consensus 256 ~~~~~kk~k~k~s~~es~k~---l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivt 332 (491)
T PF03219_consen 256 SAKKKKKKKPKMSLKESFKL---LLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVT 332 (491)
T ss_pred hhhcccccCCCccHHHHHHH---HHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHH
Confidence 11122233344566666554 3457776666655555554433321111 1111111101123355556677777
Q ss_pred HHHHhhhhhhccCCCCh
Q 020441 185 AICSLAAGRLTTGLPSI 201 (326)
Q Consensus 185 ~i~~~~~G~l~d~~g~~ 201 (326)
.+...+.+++.+|+|=+
T Consensus 333 ii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 333 IIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HHHHHHHHHHHHHhhHH
Confidence 77777788888777743
No 243
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=96.80 E-value=0.032 Score=55.68 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=68.3
Q ss_pred HHHHHhhhhhhccC-CCChhhHHHHHHHHHHHHHHHHHhc-ccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhc
Q 020441 184 DAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWILIN-YSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILF 261 (326)
Q Consensus 184 ~~i~~~~~G~l~d~-~g~~~~i~~~g~i~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f 261 (326)
.-+.+.++|.+.|+ +|+++ .+..+.++..+...++.+. .++..+.......++..++..+|.+...+...+..++.+
T Consensus 36 ~yl~pilGg~iAD~~lG~~~-tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf 114 (654)
T TIGR00926 36 CYLTPLIGAIIADGWLGKFK-TILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQF 114 (654)
T ss_pred HHHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhc
Confidence 34556677888886 47765 5555655555443322221 111110000123456667788899999999999999999
Q ss_pred cCC----chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 262 KHD----TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 262 ~~~----~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+++ +...|..+-...++|+.++..+.+++.
T Consensus 115 ~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~ 148 (654)
T TIGR00926 115 EERQLSLRSRFFSFFYFAINAGSLISTIITPILR 148 (654)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 753 245788888888999988888877664
No 244
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.79 E-value=0.03 Score=53.91 Aligned_cols=110 Identities=14% Similarity=0.007 Sum_probs=77.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
+.+.+..++-++.+++.++.|.+.||++..+.+...+.+..+..+ +. .+..+ .+...++-+++|+..++.-+
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~-~~--~~~~s-----~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGF-LT--AAVHS-----FPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHH-HH--HHHhh-----hHHHHHHHHHHHHHhcccch
Confidence 556777888888999999999999999844322222222222211 11 11122 24567788999999999999
Q ss_pred hhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhh
Q 020441 252 QLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPY 289 (326)
Q Consensus 252 ~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~ 289 (326)
....+++..|.++ +...++.+...+++|+.++-++++.
T Consensus 154 ~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g 192 (495)
T KOG2533|consen 154 GVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYG 192 (495)
T ss_pred HHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHH
Confidence 9999999999866 4667888887777777777777765
No 245
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=96.71 E-value=0.0085 Score=57.96 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=85.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHH-HHHHHHHHhhhhHHhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLY-PLIMAALLGIGDGVLN 250 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~G~~d~~~~ 250 (326)
++.++..+......+.+|+.+.+.||+|.|. +++.|.++....+++. .+..+ .+. .+...++.|+|-++..
T Consensus 82 ~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~-v~i~G~~v~~~g~~ls--sF~~~-----i~~l~lt~gvi~G~G~~~~~ 153 (509)
T KOG2504|consen 82 QIAWIGSLLLGVYLLAGPLVSALCNRFGCRT-VMIAGGLVAALGLLLS--SFATS-----LWQLYLTFGVIGGLGLGLIY 153 (509)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHhhcCchH-HHHHHHHHHHHHHHHH--HHHhh-----HHHHHHHHHHHhhccchhhh
Confidence 4666666666677788999999999999994 8888888877766542 23332 233 3455788899999999
Q ss_pred hhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 251 TQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 251 ~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.....+++.+|+++|..|-++-....++|..+-+.+..++
T Consensus 154 ~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l 193 (509)
T KOG2504|consen 154 LPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYL 193 (509)
T ss_pred cchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHH
Confidence 9999999999999988788888888888888777777665
No 246
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=96.68 E-value=0.063 Score=51.50 Aligned_cols=119 Identities=11% Similarity=0.115 Sum_probs=66.5
Q ss_pred ccccccch--hhHHHHHHHHHHHHHHHhhhhhhccCCC-----ChhhHHHHHHHHHH-HHHHHHHhcccCCCCCcchHHH
Q 020441 164 VTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTTGLP-----SITFIVSGGAIAQV-VVFLWILINYSVTSGVLGTLYP 235 (326)
Q Consensus 164 ~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d~~g-----~~~~i~~~g~i~~~-~~~~~~~l~~~~~~~~~~~~~~ 235 (326)
..+.+|++ +++....+..+...+ .+++|.++||++ || +.++.+.++.. .. +..+...++. ....
T Consensus 52 l~~~lg~s~~~i~~~~sl~~lpw~~-K~l~g~l~D~~~i~G~rRr-~~l~~~~~l~~~~~--~~~l~~~~~~----~~~~ 123 (468)
T TIGR00788 52 LTDDLGLDGARYQRLVGLSSLGWAL-KPFAGVMSDTFPLFGYTKR-WYLVLSGLLGSAIL--YGLLPGKVSS----AKVA 123 (468)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhcCCCCccch-HHHHHHHHHHHHHH--HHhcccccch----HHHH
Confidence 34456654 565556666666666 455999999986 44 45555555442 22 1123322321 1223
Q ss_pred HHHHHHHhhhhHHhhhhhHhhHHhhccCCchh---hhhHHHHHHHHHHHHHHHHhhhh
Q 020441 236 LIMAALLGIGDGVLNTQLSALLGILFKHDTEG---AFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 236 ~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~~---~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+..++.+++.+......-++..|..+++++. ..+..-...++|..++..++..+
T Consensus 124 ~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l 181 (468)
T TIGR00788 124 AAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPL 181 (468)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH
Confidence 33566777788887788888999988844332 22211122345666655555544
No 247
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=96.58 E-value=0.11 Score=49.90 Aligned_cols=89 Identities=13% Similarity=0.010 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhh
Q 020441 173 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 252 (326)
Q Consensus 173 ~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~ 252 (326)
.++...+.++.+++..|+.|-++|+.++|+..+.....+...+..... ..+|+. ++...++.++--++...-+..
T Consensus 72 ~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~-~v~~~~----~~~~~~l~iia~v~~~~~~vf 146 (477)
T PF11700_consen 72 WLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLW-FVSPGQ----WWLALVLFIIANVGYEASNVF 146 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH-HhCcch----HHHHHHHHHHHHHHHHHHHHH
Confidence 345667888889999999999999988776444333333222222211 224442 233344444444566666777
Q ss_pred hHhhHHhhccCCch
Q 020441 253 LSALLGILFKHDTE 266 (326)
Q Consensus 253 ~~~il~~~f~~~~~ 266 (326)
.++++-++.++++.
T Consensus 147 yna~LP~la~~~~~ 160 (477)
T PF11700_consen 147 YNAYLPDLARPEPR 160 (477)
T ss_pred HHHHhHhhcCCChh
Confidence 77888888766543
No 248
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=96.32 E-value=0.00018 Score=68.30 Aligned_cols=113 Identities=12% Similarity=0.052 Sum_probs=79.7
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhh
Q 020441 173 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQ 252 (326)
Q Consensus 173 ~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~ 252 (326)
.+......-++..+|+++.|.+.||+|||+ .+..+.++..+..++ ....++. .++....+.-++.|++.+...+.
T Consensus 48 ~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~-~~~~~~~~~~i~~~~--~~~~~~~--~~~~~~~~~R~~~G~~~g~~~~~ 122 (451)
T PF00083_consen 48 SSLLTSSFFIGAIVGALIFGFLADRYGRKP-ALIISALLMIIGSIL--IAFAPSY--NNFWMLLIGRFLIGFGIGGAYVV 122 (451)
T ss_pred HHHHHHHHHhhhcccccccccccccccccc-ccccccccccccccc--ccccccc--ccccccccccccccccccccccc
Confidence 344556666778899999999999999995 666666555544332 2233310 00245566678899999999999
Q ss_pred hHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 253 LSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 253 ~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
...++.|..|++ |....+..+....+|..++..+...+
T Consensus 123 ~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~ 161 (451)
T PF00083_consen 123 SPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV 161 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccc
Confidence 999999999876 44445588888888888877776543
No 249
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.27 E-value=0.12 Score=48.58 Aligned_cols=117 Identities=14% Similarity=0.029 Sum_probs=71.3
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccC-CCCCcchH--HHHHHHHHHhhhhH
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSV-TSGVLGTL--YPLIMAALLGIGDG 247 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~-~~~~~~~~--~~~~~~~l~G~~d~ 247 (326)
+..-+...+|.++.+..++..-++.|++|-|. ..+++.++..+....-.+.-.| -++. ++ +.+....+-+..+-
T Consensus 79 ~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~-a~llgt~ln~iGa~Ir~iss~p~v~~~--f~~~l~~~Gq~iaa~Aq~ 155 (480)
T KOG2563|consen 79 SAADWLSMIYMVVSVPFGFAAMWILDKFGLRT-ALLLGTVLNGIGAWIRLISSLPFVPPL--FRRPLTHTGQSIAAAAQP 155 (480)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHhhcccchHH-HHHHHHHHHHHHHHHhhhccCcccccc--chhhhhHHhHHHHHHhhh
Confidence 35667788898888988888889999999884 6677777766433211122111 0010 12 23333344344443
Q ss_pred HhhhhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 248 VLNTQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 248 ~~~~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.....-.-+-+..||++ +..|-+.--+.+-+|.++++.+.+.+
T Consensus 156 Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppil 199 (480)
T KOG2563|consen 156 FILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPIL 199 (480)
T ss_pred HhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhcccee
Confidence 33333233344457654 56676777777789999999998876
No 250
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.24 E-value=0.28 Score=45.77 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC-CchhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 232 TLYPLIMAALLGIGDGVLNTQLSALLGILFKH-DTEGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 232 ~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~-~~~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
.+..+++.+.-|+..+..+......+.+..|+ +||-+.+.-....+.|..++-+++-.+
T Consensus 335 i~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 335 IWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36677778888998888887777777776664 468788888888888888888776443
No 251
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.02 E-value=1.4 Score=41.69 Aligned_cols=250 Identities=10% Similarity=0.042 Sum_probs=121.0
Q ss_pred CcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHHHHHHHHHHHHH-HHHccCC----------cccc
Q 020441 39 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIVFLGVITLGTIL-MCFLRKE----------EDKG 107 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~~~~i~~l~~~l-~~~l~~~----------~~~~ 107 (326)
++...+.+...--+-+.+.++|+++...+.... +.+.-.++..+..+++.++ .+++++. ++++
T Consensus 144 ~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~------s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L~~~~~~~ 217 (432)
T PF06963_consen 144 PGALARMNATMRRIDLFCKLLAPLFVGLLMTFA------SPVIAAIFIAGWNLASVFVEYFLLARVYNSVPALAVKKRSS 217 (432)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcCCCCCc
Confidence 557788888899999999999999987775422 2232233333344444433 3333211 1111
Q ss_pred ccchh--hh---chhhhhHHHHHHHHHHHh-hcchhhHHHHHHHHHHHHHHHHHH------hhcccccccccccc--hhh
Q 020441 108 EKETA--DA---SVNFYSYLVSLSKSITTL-LADVRMLLIIPLFAYSGLQQAFVW------AEFTKEIVTPALGV--SGV 173 (326)
Q Consensus 108 ~~~~~--~~---~~~~~~~~~~~~k~~~~~-~~~~~~lll~p~~~~~g~~~~f~~------~~~~~~~~~~~lg~--~~~ 173 (326)
+++.. ++ ++.+.....+.+++.++. ..+++...-=|. +..++..++.+ +..+..|.... |. ..+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~v-flas~alalLY~TVLsf~~lmt~yl~~~-G~s~~~i 295 (432)
T PF06963_consen 218 ESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPV-FLASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVI 295 (432)
T ss_pred cccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHH-HHHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHH
Confidence 11100 00 001111122222222222 233444332222 22222222211 11122332222 44 366
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH-hcccCCCC--CcchHHHHHHHHHHhhhhHHhh
Q 020441 174 GGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL-INYSVTSG--VLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 174 ~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~-l~~~~~~~--~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
|..-.+..+.+..+.++..++.+|+|..+ .=..+...+..+..+.. -.|.+.++ .......+...++==+|--++-
T Consensus 296 gi~R~~gav~Gl~gT~~~p~l~~riGlvr-~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fD 374 (432)
T PF06963_consen 296 GIFRGLGAVFGLLGTWVYPWLMKRIGLVR-AGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFD 374 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchh-hHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence 77777777788888888899999998664 33445555554443221 12333322 1000111111111111222233
Q ss_pred hhhHhhHHhhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 020441 251 TQLSALLGILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYISLQAMLI 297 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~~~~~~~ 297 (326)
-...-++.|..|++ |....+.-...|++...+.|...-.++-..+..
T Consensus 375 L~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~~~P~~F~ 422 (432)
T PF06963_consen 375 LAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIFPRPSQFG 422 (432)
T ss_pred HHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhccCChHhcC
Confidence 34455666777866 455566999999999999888876555333333
No 252
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=95.86 E-value=0.05 Score=50.99 Aligned_cols=146 Identities=14% Similarity=0.122 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHH--hhcccccccccccch--hhHHHHHHHHHHHHHHHhhhhhhcc----CCCChhhHHHHHHHHHHHH
Q 020441 144 LFAYSGLQQAFVW--AEFTKEIVTPALGVS--GVGGAMAVYGAFDAICSLAAGRLTT----GLPSITFIVSGGAIAQVVV 215 (326)
Q Consensus 144 ~~~~~g~~~~f~~--~~~~~~~~~~~lg~~--~~~~~~~~~gi~~~i~~~~~G~l~d----~~g~~~~i~~~g~i~~~~~ 215 (326)
.....|.+.+.-. ++.++ | ...+|+. +.+.+-.+.-+...+.+|+.|..+| |+|||+|.+..+....++.
T Consensus 38 ~~ia~Gvqf~wA~elsy~tP-y-l~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~ 115 (498)
T KOG0637|consen 38 ASIAAGVQFGWALELSYLTP-Y-LQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVS 115 (498)
T ss_pred HHHHHHHHHHHHHHhccccH-H-HHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHH
Confidence 3455565543322 23333 1 2235553 4455556666777788899999998 4788877766665554444
Q ss_pred HHHHH------hcccCCCCC-cchH---HHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-chh-hhhHHHHHHHHHHHHH
Q 020441 216 FLWIL------INYSVTSGV-LGTL---YPLIMAALLGIGDGVLNTQLSALLGILFKHD-TEG-AFAQLKVWQCASIAVV 283 (326)
Q Consensus 216 ~~~~~------l~~~~~~~~-~~~~---~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~~~-~fa~~~~~~~~g~~i~ 283 (326)
.+++. ....+++.- ..+. ...+-.-++-+.....|+..-++++++..++ +.. +.+.+.++.++|..++
T Consensus 116 l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLG 195 (498)
T KOG0637|consen 116 LFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLG 195 (498)
T ss_pred HhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceee
Confidence 33211 011122111 0011 1222233445555567788899999998643 444 8999999999999999
Q ss_pred HHHhhhhh
Q 020441 284 FFIGPYIS 291 (326)
Q Consensus 284 ~~i~~~~~ 291 (326)
|...++..
T Consensus 196 Y~~g~y~~ 203 (498)
T KOG0637|consen 196 YALGSYLG 203 (498)
T ss_pred eecccccC
Confidence 99997764
No 253
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.86 E-value=0.053 Score=50.29 Aligned_cols=88 Identities=18% Similarity=0.149 Sum_probs=64.5
Q ss_pred HHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC-c---hhhhhHHHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHH
Q 020441 233 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD-T---EGAFAQLKVWQCASIAVVFFIGPYIS----LQAMLIVMVVGIC 304 (326)
Q Consensus 233 ~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~-~---~~~fa~~~~~~~~g~~i~~~i~~~~~----~~~~~~~~~~~~~ 304 (326)
...++..++.++|.+...+.+.++.++.|+++ + +..|+.|-...++|+.++....+++. ...-..+..+..+
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~ 113 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGML 113 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHH
Confidence 35666677889999999999999999999865 2 45899999999999999999998885 3333344445556
Q ss_pred HHHHHHHHHHHHHhhc
Q 020441 305 VALVGILFLTIQVEKA 320 (326)
Q Consensus 305 ~~~~~~~~~~~~~~~~ 320 (326)
++++.+..-.++.+++
T Consensus 114 ~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 114 LALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHCCCCTT--S
T ss_pred HHHHHHHhCCcCCcCc
Confidence 6666665544444443
No 254
>PF12832 MFS_1_like: MFS_1 like family
Probab=95.82 E-value=0.037 Score=38.87 Aligned_cols=37 Identities=19% Similarity=0.106 Sum_probs=31.9
Q ss_pred ccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhH
Q 020441 168 LGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFI 204 (326)
Q Consensus 168 lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i 204 (326)
++..++|.++.+..+...++.+++|.+.||.++++.+
T Consensus 32 l~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~ 68 (77)
T PF12832_consen 32 LSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVI 68 (77)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHH
Confidence 3345899999999999999999999999999988633
No 255
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=95.12 E-value=0.34 Score=44.62 Aligned_cols=115 Identities=11% Similarity=-0.095 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHh-cccCCCCCcchHHHHHHHHHHhhhhHHhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILI-NYSVTSGVLGTLYPLIMAALLGIGDGVLN 250 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~l~G~~d~~~~ 250 (326)
+..++....-.+..+++..+|...|++|||+ -....++.....- ++ ...|+ +..+.+...+||++-+. .
T Consensus 114 q~~llt~~v~~gmllga~~w~l~~d~~grr~-~f~~T~l~t~v~~---~is~~spn-----f~~L~~f~~l~~~g~gg-~ 183 (528)
T KOG0253|consen 114 QAPLLTLSVFLGMLVGAMVWGLSADTIGRRK-GFNLTFLVTGVFG---VISGASPN-----FASLCVFRALWGFGVGG-L 183 (528)
T ss_pred hhhHHHHHHHhhhhhhhhhhheehhhhhcch-hhhhhHHHHHHHH---HhhcCCCC-----eehhhHHHHHHhccCCC-c
Confidence 4455566666778899999999999999985 4443333322221 12 23343 35567778899999998 8
Q ss_pred hhhHhhHHhhccCC-c--hh-hhhHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 020441 251 TQLSALLGILFKHD-T--EG-AFAQLKVWQCASIAVVFFIGPYISLQAML 296 (326)
Q Consensus 251 ~~~~~il~~~f~~~-~--~~-~fa~~~~~~~~g~~i~~~i~~~~~~~~~~ 296 (326)
++..++..+.-|.. + .. .++.+-..|....+++++.-+.+.+.+-.
T Consensus 184 pv~~~~yle~lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l 233 (528)
T KOG0253|consen 184 PVDSAIYLEFLPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLL 233 (528)
T ss_pred cHhHHHHHHhccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 88999999998864 2 12 34577777888888888888777655433
No 256
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=95.04 E-value=0.62 Score=44.60 Aligned_cols=102 Identities=13% Similarity=0.121 Sum_probs=60.1
Q ss_pred HHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHH
Q 020441 179 VYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLG 258 (326)
Q Consensus 179 ~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~ 258 (326)
..|+...+.++..|.++||+|||. .+....+...+-- +. +.+.. +..++..-+.| +.+.......+..+
T Consensus 70 ~~~~~~~i~s~~iG~lSD~~grk~-~L~~~~~~~~l~~-~~-~~~~~-------~~~~~~~~l~g-~~~~~~s~~~a~va 138 (463)
T KOG2816|consen 70 TAGLLTLISSPLIGALSDRYGRKV-VLLLPLFGTILPA-LC-LLFQG-------YWFFLLLGLSG-GFSAIFSVGFAYVA 138 (463)
T ss_pred hhHHHHHHHHhhhHHhhhhhhhhh-hHHHHHHHHHHhH-HH-HHHHH-------HHHhhhccccc-chhhhhhhhhhhee
Confidence 457788899999999999999994 4333322211100 00 01111 11222222222 34445566677777
Q ss_pred hhccCC-chhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 259 ILFKHD-TEGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 259 ~~f~~~-~~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+...++ |...++..+..-.++..+++..+.++.
T Consensus 139 dis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~ 172 (463)
T KOG2816|consen 139 DISSEEERSSSIGLLSGTFGAGLVIGPALGGYLV 172 (463)
T ss_pred eccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 776655 556788888877888888888887664
No 257
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=94.97 E-value=0.76 Score=39.64 Aligned_cols=113 Identities=22% Similarity=0.186 Sum_probs=70.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
..++....+.+...++.++.|++.||.|||+ .+..+........+.. ...++. ......+..+..|++.+...+
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~-~~~~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~g~~~~~~~~ 113 (338)
T COG0477 40 LYGLLLSAFFLGYAIGSLLAGPLGDRYGRRK-VLIIGLLLFLLGTLLL--ALAPNV---GLALLLILRLLQGLGGGGLLP 113 (338)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhccccccchH-HHHHHHHHHHHHHHHH--HhCccc---hHHHHHHHHHHHHhhhHHHHH
Confidence 3456667777777888899999999998884 5555543312211111 111111 124445555557899998889
Q ss_pred hhHhhHHhhccC--CchhhhhHHHH-HHHHHHHHHHHHhhhh
Q 020441 252 QLSALLGILFKH--DTEGAFAQLKV-WQCASIAVVFFIGPYI 290 (326)
Q Consensus 252 ~~~~il~~~f~~--~~~~~fa~~~~-~~~~g~~i~~~i~~~~ 290 (326)
...+++.+.+|+ ++....+.... ...+|..+++.+...+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T COG0477 114 VASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLL 155 (338)
T ss_pred HHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999996 44445555555 4556666666554433
No 258
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=94.87 E-value=0.27 Score=44.38 Aligned_cols=60 Identities=17% Similarity=0.129 Sum_probs=51.1
Q ss_pred hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhhh
Q 020441 232 TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYIS 291 (326)
Q Consensus 232 ~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~~ 291 (326)
+....+..++.|.|.+..|+..+.+++.+.|+++ +...+..+..+++|+.+++.+.+.+.
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i 70 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLI 70 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3456777889999999999999999999988764 55788999999999999999998553
No 259
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.51 E-value=4.5 Score=38.47 Aligned_cols=88 Identities=17% Similarity=0.188 Sum_probs=44.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH--hcccCCC--C--CcchHHHHHHHHHHhhhh
Q 020441 173 VGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTS--G--VLGTLYPLIMAALLGIGD 246 (326)
Q Consensus 173 ~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~--l~~~~~~--~--~~~~~~~~~~~~l~G~~d 246 (326)
......++.++..+|..+..+..- .+++...+....++-.+ +++.+ .+..|+. + ....+..++..+++|+..
T Consensus 309 ~~i~~~~fNvgD~vGR~~~~~~~~-p~~~~~~l~i~s~~R~i-FIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 309 PIICFLLFNLFDWLGRSLTSKFMW-PDEDSRWLPILSFLRVL-FIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHhhhhheeEe-eCCCccchHHHHHHHHH-HHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 345668899999999886654321 11111112223333332 22322 2333211 1 111255667788889888
Q ss_pred HHhhhhhHhhHHhhcc
Q 020441 247 GVLNTQLSALLGILFK 262 (326)
Q Consensus 247 ~~~~~~~~~il~~~f~ 262 (326)
|-..+.......+..+
T Consensus 387 Gy~~s~~m~~~p~~v~ 402 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVD 402 (437)
T ss_pred hHHHHHHHHhcCCCCC
Confidence 7766655444444444
No 260
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=93.91 E-value=0.78 Score=36.96 Aligned_cols=94 Identities=20% Similarity=0.154 Sum_probs=57.9
Q ss_pred HHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccC
Q 020441 184 DAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKH 263 (326)
Q Consensus 184 ~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~ 263 (326)
.++.+++.+.+.+++|.|. .+.+|.+....- ... .+.|++ +..+...++.|++.+..-+.....+.+..++
T Consensus 50 ~~~s~l~~P~iv~~lg~K~-sm~lg~~~y~~y-~~~--~~~~~~-----~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKW-SMILGSLGYAIY-IAS--FFYPNS-----YTLYPASALLGFGAALLWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHhHHHHHHHHhhHH-HHHHHHHHHHHH-HHH--HHhhhH-----HHHHHHHHHHhhhhHHhhHhhhHHHHHcCCH
Confidence 3445555566667888884 666676665532 222 233442 5678888999999999888777788777654
Q ss_pred C-chhh----hhHHHHHHHHHHHHHHHH
Q 020441 264 D-TEGA----FAQLKVWQCASIAVVFFI 286 (326)
Q Consensus 264 ~-~~~~----fa~~~~~~~~g~~i~~~i 286 (326)
+ ++.- +++++..+-.|..+.+++
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 2322 335555555555555544
No 261
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=93.69 E-value=0.58 Score=43.70 Aligned_cols=89 Identities=19% Similarity=0.097 Sum_probs=60.8
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCC-CCCcchHHHHHHHHHHhhhhHHh
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVT-SGVLGTLYPLIMAALLGIGDGVL 249 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~l~G~~d~~~ 249 (326)
+..++...+.++..++.+|+.|.+.|+.|+|++.+....+....... .+.+.|+ ++ ++...+..++-.++...-
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~--~L~~i~~~s~---~~~~l~~~il~~i~~~~s 132 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTF--LLWFIPPGSY---LLLLLLFLILASIGFEFS 132 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHH--HHHHhCCCch---HHHHHHHHHHHHHhcchh
Confidence 46788899999999999999999999999776544333222222211 1233333 21 244556667777788888
Q ss_pred hhhhHhhHHhhccCC
Q 020441 250 NTQLSALLGILFKHD 264 (326)
Q Consensus 250 ~~~~~~il~~~f~~~ 264 (326)
+..-++++.+..+++
T Consensus 133 ~Vfyds~L~~~~~k~ 147 (438)
T COG2270 133 NVFYDSMLPRLTTKD 147 (438)
T ss_pred heehhhHhhhhcCcc
Confidence 888899999888764
No 262
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=93.48 E-value=2 Score=37.49 Aligned_cols=80 Identities=11% Similarity=0.015 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhhhhhhccC-CCChhhHHH----HHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhh
Q 020441 177 MAVYGAFDAICSLAAGRLTTG-LPSITFIVS----GGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNT 251 (326)
Q Consensus 177 ~~~~gi~~~i~~~~~G~l~d~-~g~~~~i~~----~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~ 251 (326)
.+++-.+..+|....|+.++. ..||+ .+. .+.++..+..+..+ ...++.. .+....++..++-|++--..|+
T Consensus 147 ~I~fv~g~~~G~~~ig~~nkt~~kRk~-fi~~~~~~gi~~~~l~~~~~~-~~g~~~~-~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 147 QILFVAGYFLGPFTIGLWNKTNYKRKP-FIHFIISLGIVFFVLSIVVVY-FVGPGNA-AGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHhhhceeeccchhhhhhhhh-HHHHHHHHHHHHHHHHHHHHH-HhCcchH-HHHHHHHHHHHHHHHHHHhhhH
Confidence 344444455666777877653 34443 322 22333322222211 2233321 0113345556666666666666
Q ss_pred hhHhhHHh
Q 020441 252 QLSALLGI 259 (326)
Q Consensus 252 ~~~~il~~ 259 (326)
.+--+=-|
T Consensus 224 ViL~lPhE 231 (267)
T PF07672_consen 224 VILNLPHE 231 (267)
T ss_pred HHhcChhh
Confidence 55544433
No 263
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=92.83 E-value=0.15 Score=49.00 Aligned_cols=76 Identities=24% Similarity=0.371 Sum_probs=53.8
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHH-HHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMF-ASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~-~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
+|--++||+..+..|.+...|+...+|+ +.+....|++.+.+ .+|--+|.+|+-.+.... +-|
T Consensus 463 LPieilqgit~aliWaa~~sY~s~vaPp----------~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f------g~~ 526 (618)
T KOG3762|consen 463 LPIEILQGITHALIWAAIISYASHVAPP----------GLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF------GAR 526 (618)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhhCCC----------cchHHHHHHHHHHhcccCcchhhhhhhhhheee------hhH
Confidence 5677899999999999999999999994 56667777777776 667677777765543321 235
Q ss_pred hhHHHHHHHHHHHH
Q 020441 81 LLFIVFLGVITLGT 94 (326)
Q Consensus 81 ~~f~~~~~i~~l~~ 94 (326)
..|-++. ++++..
T Consensus 527 ttf~~~g-iAcl~~ 539 (618)
T KOG3762|consen 527 TTFRIFG-IACLVT 539 (618)
T ss_pred HHHHHHH-HHHHHH
Confidence 5566554 444443
No 264
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=92.17 E-value=11 Score=36.04 Aligned_cols=32 Identities=13% Similarity=-0.094 Sum_probs=24.4
Q ss_pred cchhhhhHHHHHHHHHhHHHHHHHHHHHhcCC
Q 020441 40 TVIGSFNGEFWGMFASHQFVGNLITLAVLKDD 71 (326)
Q Consensus 40 ~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~ 71 (326)
++-.|+.+.|....+.+..+++.+....++..
T Consensus 180 ~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~ 211 (509)
T COG3202 180 EEAKRFYPLFGLGANISLLLSGEVTSWLSKHR 211 (509)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHhhch
Confidence 35568888888888888888888887776643
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=91.65 E-value=13 Score=37.41 Aligned_cols=63 Identities=17% Similarity=0.098 Sum_probs=40.3
Q ss_pred CcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCC-CCCCCCchhhHHHHHHHHHHHHHHHHHcc
Q 020441 39 GTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDK-GGSTSGTTLLFIVFLGVITLGTILMCFLR 101 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~-~~~~~~~~~~f~~~~~i~~l~~~l~~~l~ 101 (326)
++++-+++.+|+...++|..++..+...+-.... .+...+|...|.+..++++++.+++..-+
T Consensus 119 ~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~ 182 (654)
T TIGR00926 119 LSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGS 182 (654)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 3457788888888888888888777655532211 11234677778777766777666655433
No 266
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=91.00 E-value=1.2 Score=39.23 Aligned_cols=115 Identities=11% Similarity=0.078 Sum_probs=64.0
Q ss_pred cccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhh
Q 020441 167 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGD 246 (326)
Q Consensus 167 ~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d 246 (326)
..|..++|...++.--..++.+.+.|.+.|+.|||+. .+...+.+++..+..+ +++ +...++.-++=|+..
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra-----cvtycitYiLsCiTKh-Spq---YkVLmVGR~LGGiaT 138 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA-----CVTYCITYILSCITKH-SPQ---YKVLMVGRVLGGIAT 138 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccc-----eeeehHHHHHHHHhhc-CCc---eEEEeehhhhhhHHH
Confidence 3455556555544444456677888999999999962 2333333333223221 221 334455566667776
Q ss_pred HHhh-hhhHhhHHhhccCCc------hhhhh-HHHHHHHHHHHHHHHHhhhh
Q 020441 247 GVLN-TQLSALLGILFKHDT------EGAFA-QLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 247 ~~~~-~~~~~il~~~f~~~~------~~~fa-~~~~~~~~g~~i~~~i~~~~ 290 (326)
+... ..-.|+++|.-.++. ...|+ ..-+++.+-+.++...+..+
T Consensus 139 sLLFSaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~l 190 (454)
T KOG4332|consen 139 SLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLL 190 (454)
T ss_pred HHHHHHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 6654 455788888753321 22466 44466666666665555444
No 267
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=90.69 E-value=8.9 Score=35.89 Aligned_cols=87 Identities=20% Similarity=0.211 Sum_probs=43.7
Q ss_pred hhHHHHHH-HHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHH--hcccCCCCC-cchHHHHHHHHHHhhhhH
Q 020441 172 GVGGAMAV-YGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWIL--INYSVTSGV-LGTLYPLIMAALLGIGDG 247 (326)
Q Consensus 172 ~~~~~~~~-~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~--l~~~~~~~~-~~~~~~~~~~~l~G~~d~ 247 (326)
.......+ +.+...+|.+...++.+.- ||. +. +..++... +++.+ .+++|-+.. .+.+...+...++|+..|
T Consensus 283 y~~~~~~l~fN~~d~vG~~~a~~~~~~~-~r~-l~-i~v~lR~l-fiPlF~~cn~~~~~v~~~~~~~~~~l~~~lglsnG 358 (406)
T KOG1479|consen 283 YALLLVFLSFNVFDLIGSILAALLTWPD-PRK-LT-IPVLLRLL-FIPLFLLCNYPPLPVVFESDGWFIFLMSLLGLSNG 358 (406)
T ss_pred hHHHHHHHHhHHHHHhhhhhhhcccCCC-Cce-eh-HHHHHHHH-HHHHHHHhccCCCCceecCchHHHHHHHHHHhccc
Confidence 44555556 8999999988777765543 332 22 22223222 22222 355443221 112455666677777766
Q ss_pred HhhhhhHhhHHhhcc
Q 020441 248 VLNTQLSALLGILFK 262 (326)
Q Consensus 248 ~~~~~~~~il~~~f~ 262 (326)
=..+.....-.+..|
T Consensus 359 Yltsl~m~~aPk~v~ 373 (406)
T KOG1479|consen 359 YLTSLIMMYAPKQVK 373 (406)
T ss_pred hHhhheehhcCCCCC
Confidence 544443333333343
No 268
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.08 E-value=8.1 Score=36.77 Aligned_cols=31 Identities=19% Similarity=0.365 Sum_probs=25.1
Q ss_pred HHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC
Q 020441 233 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD 264 (326)
Q Consensus 233 ~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~ 264 (326)
+..+++.++.|++++..|+...++.+ .+|++
T Consensus 107 ~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~ 137 (437)
T TIGR00939 107 VTTMASVVIINSGMALLQGSLFGLAG-VFPST 137 (437)
T ss_pred HHHHHHHHHHHhhhhhhcccchhhcc-cCCHH
Confidence 45567778889999999999999987 46754
No 269
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=86.08 E-value=34 Score=32.98 Aligned_cols=34 Identities=12% Similarity=-0.105 Sum_probs=20.8
Q ss_pred hhhHHHHHHHHHHHHH-HHhhhhhhccCCCChhhHH
Q 020441 171 SGVGGAMAVYGAFDAI-CSLAAGRLTTGLPSITFIV 205 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i-~~~~~G~l~d~~g~~~~i~ 205 (326)
+.+.+.-...-+...+ ..++.+++++|.+|++ ++
T Consensus 43 e~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~-lf 77 (472)
T TIGR00769 43 EIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEA-LF 77 (472)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH-hH
Confidence 4444444333333333 3788899999999885 43
No 270
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=85.74 E-value=2.6 Score=40.19 Aligned_cols=101 Identities=22% Similarity=0.146 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhH
Q 020441 178 AVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALL 257 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il 257 (326)
.+-....++.+++.+.+.|+.++| ..+.+++..+..... .++ .+++ +..++..+++|+|++.+.+-.-..+
T Consensus 57 aiiY~~ftv~~l~~psiv~~i~~K-~~lv~ga~~y~~f~~-gfl--~~N~-----y~~yfssallG~Gaallw~GqG~yl 127 (461)
T KOG3098|consen 57 AIIYAFFTVSCLFAPSIVNFLGPK-WALVIGATCYAAFPL-GFL--FPNS-----YYLYFSSALLGFGAALLWTGQGGYL 127 (461)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhHH-HHHHHHhHHHHHHHH-HHH--hcch-----HHHHHHHHHhhhhHHheecccceeh
Confidence 344445667778888888999988 477777777664332 222 2332 6789999999999999665556666
Q ss_pred HhhccCC-chh----hhhHHHHHHHHHHHHHHHHh
Q 020441 258 GILFKHD-TEG----AFAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 258 ~~~f~~~-~~~----~fa~~~~~~~~g~~i~~~i~ 287 (326)
.+..+++ .+. -++++++..-.|+.+.+.+.
T Consensus 128 t~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~ 162 (461)
T KOG3098|consen 128 TSNSTRETIERNISIFWAIGQSSLIIGGIILFIYF 162 (461)
T ss_pred hhcCChhhHHHHHHHHHHHHHHHHHhhhHhheeee
Confidence 6776654 243 35677777777877777665
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=82.47 E-value=4.3 Score=38.53 Aligned_cols=54 Identities=6% Similarity=-0.032 Sum_probs=39.1
Q ss_pred HhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhc
Q 020441 6 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLK 69 (326)
Q Consensus 6 ~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~ 69 (326)
++..+....-|......++|.+|+ ..-|..+++.-++.++|..++..++..+..
T Consensus 326 ~l~~~~~~i~~mP~lvl~a~lcP~----------G~Egt~yall~s~~Nlg~~~s~~lg~~l~~ 379 (433)
T PF03092_consen 326 ILEEVIGMIAFMPSLVLAARLCPK----------GSEGTVYALLASFSNLGSSVSSTLGAFLME 379 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCC----------CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555565566667888884 567888898888889988888888877654
No 272
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=82.39 E-value=26 Score=34.18 Aligned_cols=77 Identities=17% Similarity=0.179 Sum_probs=40.7
Q ss_pred hhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhcccccccccccc-------hhhHHHHHHHHHHHHHHHhh
Q 020441 118 FYSYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGV-------SGVGGAMAVYGAFDAICSLA 190 (326)
Q Consensus 118 ~~~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~-------~~~~~~~~~~gi~~~i~~~~ 190 (326)
+..+||..=-+ +++.|+...+.-.+.-+|.+..+..... ..-..+|. .-......++.++..+++..
T Consensus 243 ee~GWKlvhgD---VFR~P~~~~lls~lvG~G~Qll~~~~~~---~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~ 316 (521)
T PF02990_consen 243 EESGWKLVHGD---VFRPPKHPMLLSALVGTGIQLLFMALVT---LFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYV 316 (521)
T ss_pred cccchhhhhHH---HhcCcCCchHHHhHhcchhhhhHHHHHH---HHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHH
Confidence 44566654333 5667766555445556666544332110 00011121 12334456778888888899
Q ss_pred hhhhccCCCC
Q 020441 191 AGRLTTGLPS 200 (326)
Q Consensus 191 ~G~l~d~~g~ 200 (326)
++++.+.++.
T Consensus 317 S~~~yk~~~g 326 (521)
T PF02990_consen 317 SARLYKSFGG 326 (521)
T ss_pred HHHHHHHcCC
Confidence 9888765554
No 273
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=79.27 E-value=18 Score=32.75 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhhhhHH-hhhhhHhhHHhhccCCchhhhhHHHHHHHHHHHHHHHHhh
Q 020441 233 LYPLIMAALLGIGDGV-LNTQLSALLGILFKHDTEGAFAQLKVWQCASIAVVFFIGP 288 (326)
Q Consensus 233 ~~~~~~~~l~G~~d~~-~~~~~~~il~~~f~~~~~~~fa~~~~~~~~g~~i~~~i~~ 288 (326)
+..+++.+.=|+..+. +-++-..+--|.-||+||-+.+.-...-++|..++-+++-
T Consensus 343 ~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 343 WIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 5555555555664444 4445555555566777887888877778888877777653
No 274
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=76.22 E-value=0.97 Score=40.78 Aligned_cols=84 Identities=13% Similarity=0.092 Sum_probs=2.3
Q ss_pred HHHHHHHHHHHHHhhhhhhccC-CCChhhHHHHHHHHHHHHHHHHH--hcccCCC----C-CcchHHHHHHHHHHhhhhH
Q 020441 176 AMAVYGAFDAICSLAAGRLTTG-LPSITFIVSGGAIAQVVVFLWIL--INYSVTS----G-VLGTLYPLIMAALLGIGDG 247 (326)
Q Consensus 176 ~~~~~gi~~~i~~~~~G~l~d~-~g~~~~i~~~g~i~~~~~~~~~~--l~~~~~~----~-~~~~~~~~~~~~l~G~~d~ 247 (326)
...++.++..+|..+.++..-+ ..+| .++ ...++-.. +++.+ .+..|++ . ....+..++..+++|+..|
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~-~l~-~~s~~R~~-fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNG 263 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPR-WLW-ILSLLRFL-FIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNG 263 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccc-cHH-HHHHHHHH-HHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccc
Confidence 3567899999988877753211 1223 232 22223322 22222 2344331 0 1111445667788888877
Q ss_pred HhhhhhHhhHHhhcc
Q 020441 248 VLNTQLSALLGILFK 262 (326)
Q Consensus 248 ~~~~~~~~il~~~f~ 262 (326)
-..+.......+..+
T Consensus 264 yl~tl~m~~~p~~v~ 278 (309)
T PF01733_consen 264 YLSTLAMMYAPKSVS 278 (309)
T ss_dssp ---HHHH--------
T ss_pred hhhhceeeeCCCcCC
Confidence 666655555555544
No 275
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=75.65 E-value=4.1 Score=34.92 Aligned_cols=71 Identities=17% Similarity=0.025 Sum_probs=51.0
Q ss_pred chhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHH-HHHHhHHHHHHHHHHHhcCCCCCCCCCch
Q 020441 2 VPASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWG-MFASHQFVGNLITLAVLKDDKGGSTSGTT 80 (326)
Q Consensus 2 i~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~-~~~~~~iiG~li~~~~~~~~~~~~~~~~~ 80 (326)
+..|.++|++.|..+.....++.+..++ + ++|+...+.... ....+.++|+.++..+... ...+||
T Consensus 98 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 164 (338)
T COG0477 98 LILRLLQGLGGGGLLPVASALLSEWFPE--A-------TERGLAVGLVTLGAGALGLALGPLLAGLLLGA----LLWGWR 164 (338)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHhcCc--h-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcchH
Confidence 4567889999999999888888888773 0 367888888777 4677888888666555433 245677
Q ss_pred hhHHH
Q 020441 81 LLFIV 85 (326)
Q Consensus 81 ~~f~~ 85 (326)
..|..
T Consensus 165 ~~~~~ 169 (338)
T COG0477 165 AAFLL 169 (338)
T ss_pred HHHHH
Confidence 65543
No 276
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=70.71 E-value=1.1e+02 Score=29.77 Aligned_cols=69 Identities=10% Similarity=0.106 Sum_probs=36.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHH-HHHHHHhhhhhhccCCCChhhHHH
Q 020441 136 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIVS 206 (326)
Q Consensus 136 ~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi-~~~i~~~~~G~l~d~~g~~~~i~~ 206 (326)
||.+.+..+++...+..++.-. .-.+++....|.+.+.++-...-+ +..+...+..|++++.++.+ ++.
T Consensus 24 ~k~~~l~~m~f~i~f~y~~lR~-~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~-lFy 93 (491)
T PF03219_consen 24 KKFLPLALMFFFILFNYTILRD-LKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREK-LFY 93 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH-HHH
Confidence 5666666566666655554422 212333333366655554332222 23445566788999998875 543
No 277
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=70.39 E-value=62 Score=30.43 Aligned_cols=31 Identities=32% Similarity=0.611 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhhhhHHhhhhhHhhHHhhccCC
Q 020441 233 LYPLIMAALLGIGDGVLNTQLSALLGILFKHD 264 (326)
Q Consensus 233 ~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~ 264 (326)
...+++.++.+++|+..|+.++...+. +|.+
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ 148 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGLAGL-FPSE 148 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhhhhc-CCHH
Confidence 445777889999999999999999976 5665
No 278
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=69.29 E-value=1e+02 Score=29.08 Aligned_cols=91 Identities=10% Similarity=0.129 Sum_probs=53.1
Q ss_pred hhhhccCCCChhhHHHHHHHHHHHHHHHHHhcccCCCCCcchHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhh
Q 020441 191 AGRLTTGLPSITFIVSGGAIAQVVVFLWILINYSVTSGVLGTLYPLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAF 269 (326)
Q Consensus 191 ~G~l~d~~g~~~~i~~~g~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~f 269 (326)
...+.|..+-| |+++++.+.....+.+ +-+.++ ....-+.-+++|+..+. +..-++.+-...|+++ ..+-
T Consensus 61 vflltd~l~Yk-pviil~~~~~i~t~~l--ll~~~s-----v~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vt 131 (412)
T PF01770_consen 61 VFLLTDYLRYK-PVIILQALSYIITWLL--LLFGTS-----VLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVT 131 (412)
T ss_pred HHHHHHHhhhh-HHHHHHHHHHHHHHHH--HHHHCc-----HHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHH
Confidence 34466877767 6888887777766543 234443 23445667888888776 4444455544445444 3344
Q ss_pred hHHHHHHHHHHHHHHHHhhhh
Q 020441 270 AQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 270 a~~~~~~~~g~~i~~~i~~~~ 290 (326)
+.-|...-+|-.++..++..+
T Consensus 132 s~~raa~l~g~~~s~~lgQll 152 (412)
T PF01770_consen 132 SYTRAATLVGRFISSLLGQLL 152 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 455666666666665555433
No 279
>KOG1278 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=68.28 E-value=61 Score=31.59 Aligned_cols=19 Identities=11% Similarity=0.214 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHhhhhhhcc
Q 020441 178 AVYGAFDAICSLAAGRLTT 196 (326)
Q Consensus 178 ~~~gi~~~i~~~~~G~l~d 196 (326)
+++-+...+++...+|+.+
T Consensus 370 ~l~v~~G~~agY~s~rlyk 388 (628)
T KOG1278|consen 370 LLFVFMGFVAGYVSARLYK 388 (628)
T ss_pred HHHHHHHHhhhhhhhhhHh
Confidence 4444555666666777654
No 280
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=67.08 E-value=14 Score=33.27 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=54.7
Q ss_pred hhHHhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCc-hh
Q 020441 3 PASLYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGT-TL 81 (326)
Q Consensus 3 ~a~~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~-~~ 81 (326)
.+..+.|++.+++-++-...+....| |++.|...|..+++.+++..+-.+++-++...+. . -+| ..
T Consensus 357 ~~m~~lGLsysllAcslWP~va~~vp----------E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g-~--y~~le~ 423 (459)
T KOG4686|consen 357 TSMTFLGLSYSLLACSLWPCVASLVP----------EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG-S--YDNLEA 423 (459)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhhhCC----------HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC-c--hhhHHH
Confidence 35677888877755554445666666 5689999999999999999888888766543221 1 123 23
Q ss_pred hHHHHHHHHHHHHHHHHHccC
Q 020441 82 LFIVFLGVITLGTILMCFLRK 102 (326)
Q Consensus 82 ~f~~~~~i~~l~~~l~~~l~~ 102 (326)
.|++...++++.+.+.+.+.+
T Consensus 424 ffl~~~~~aL~svgil~~~N~ 444 (459)
T KOG4686|consen 424 FFLIIGLMALTSVGILFYLNK 444 (459)
T ss_pred HHHHHHHHHHHHHHHHhheec
Confidence 344333344445555555543
No 281
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=65.91 E-value=8.1 Score=35.64 Aligned_cols=82 Identities=11% Similarity=-0.032 Sum_probs=50.9
Q ss_pred HhhhhhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCCCchhhHHH
Q 020441 6 LYLGFAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLITLAVLKDDKGGSTSGTTLLFIV 85 (326)
Q Consensus 6 ~l~G~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~~~~~~~~~~~~~~~~~~~f~~ 85 (326)
.+.++|.|+.=+...++..+.-+++ .+++|.+++.+||...++|..+|......+-+ ..+|...|.+
T Consensus 41 ~lia~G~G~~K~ni~~~~~dq~~~~-------~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~------~~~~~~~f~i 107 (372)
T PF00854_consen 41 ALIAVGTGGIKPNISPFGADQYDED-------DDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQ------NYGWFLGFGI 107 (372)
T ss_dssp HHHHHHHHCCHHHHHHHHHHCSSTT-------TTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHH------CS-HHHHHHH
T ss_pred HHHHhccccccccHHHHHHHHhccc-------chhhhhhhHHHHHHHHhhhhHhhcccchhhcc------ccchhhhhhH
Confidence 4455666655555444444433321 14678899999999999999888777766643 2467766776
Q ss_pred HHHHHHHHHHHHHHc
Q 020441 86 FLGVITLGTILMCFL 100 (326)
Q Consensus 86 ~~~i~~l~~~l~~~l 100 (326)
-.+.++++.+.++.-
T Consensus 108 ~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 108 PAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhC
Confidence 655555555554443
No 282
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=65.26 E-value=16 Score=31.83 Aligned_cols=19 Identities=21% Similarity=0.289 Sum_probs=15.2
Q ss_pred CcchhhhhHHHHHHHHHhH
Q 020441 39 GTVIGSFNGEFWGMFASHQ 57 (326)
Q Consensus 39 ~~~~g~~~gif~~~~~~~~ 57 (326)
|++||...|+--+.+.+|.
T Consensus 126 P~~RG~vvgilk~~~GLSa 144 (250)
T PF06813_consen 126 PRSRGTVVGILKGFFGLSA 144 (250)
T ss_pred ccccCceehhhhHHHHhHH
Confidence 4689999999988886664
No 283
>PRK03612 spermidine synthase; Provisional
Probab=60.03 E-value=1.8e+02 Score=28.50 Aligned_cols=25 Identities=8% Similarity=-0.033 Sum_probs=16.6
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhcc
Q 020441 172 GVGGAMAVYGAFDAICSLAAGRLTT 196 (326)
Q Consensus 172 ~~~~~~~~~gi~~~i~~~~~G~l~d 196 (326)
..+.+..++-.+..+|+.+.|++.+
T Consensus 51 ~~~~ii~~fl~glalGs~l~~~~~~ 75 (521)
T PRK03612 51 QFSTVIGLMLFAMGVGALLSKYLLR 75 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 3345555666667788888887753
No 284
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=59.38 E-value=62 Score=23.06 Aligned_cols=48 Identities=19% Similarity=0.120 Sum_probs=33.9
Q ss_pred cccchhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHH
Q 020441 167 ALGVSGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVV 215 (326)
Q Consensus 167 ~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~ 215 (326)
.+..++.+++....-++..+|++...++.++..++ .++..+.+.....
T Consensus 23 ~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-~~~~~~l~~~~~~ 70 (85)
T PF06779_consen 23 GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-RLLRAGLLLTVLS 70 (85)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHHHHHHHHH
Confidence 34455788888889999999999999888775545 3555555554433
No 285
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=55.63 E-value=1.5e+02 Score=26.48 Aligned_cols=22 Identities=18% Similarity=0.424 Sum_probs=16.9
Q ss_pred hhhHHHHHHHHHhHHHHHHHHH
Q 020441 44 SFNGEFWGMFASHQFVGNLITL 65 (326)
Q Consensus 44 ~~~gif~~~~~~~~iiG~li~~ 65 (326)
..++.||..+.+....|.-+..
T Consensus 29 ~gt~lFW~llg~~F~~G~~lp~ 50 (308)
T PF06166_consen 29 IGTALFWGLLGLIFIFGDYLPP 50 (308)
T ss_pred cchHHHHHHHHHHHHcCccchh
Confidence 4478999999988888775554
No 286
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=52.84 E-value=2.3e+02 Score=27.66 Aligned_cols=75 Identities=12% Similarity=0.135 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHHHHhhccc--ccccccccchhhHHHHHHHHHHHHHHHhhhhhhcc
Q 020441 120 SYLVSLSKSITTLLADVRMLLIIPLFAYSGLQQAFVWAEFTK--EIVTPALGVSGVGGAMAVYGAFDAICSLAAGRLTT 196 (326)
Q Consensus 120 ~~~~~~~k~~~~~~~~~~~lll~p~~~~~g~~~~f~~~~~~~--~~~~~~lg~~~~~~~~~~~gi~~~i~~~~~G~l~d 196 (326)
.+.++.-|.+++.+|-|....++...+.. -.+|..++=.+ ......+..+.......+--=.+++.+...||++.
T Consensus 262 ~~i~~~Y~~l~~ilkLp~V~~li~ilL~~--KigF~a~da~T~LKLlEkG~~KE~LAl~~li~~P~qii~~~~~~Kws~ 338 (544)
T PF13000_consen 262 LSIKDVYKSLWKILKLPNVQTLIIILLTA--KIGFQANDAVTSLKLLEKGLSKEDLALLVLIDFPFQIILPYYIGKWSA 338 (544)
T ss_pred hhHHHHHHHHHHHHcCchHHHHHHHHHHH--HhccccchhhhHHHHHHcCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc
Confidence 46788889999999888887766443332 22332222111 12233333344333333333346777778888763
No 287
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=48.07 E-value=1.3e+02 Score=28.90 Aligned_cols=28 Identities=14% Similarity=0.086 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhhccCCCCh
Q 020441 174 GGAMAVYGAFDAICSLAAGRLTTGLPSI 201 (326)
Q Consensus 174 ~~~~~~~gi~~~i~~~~~G~l~d~~g~~ 201 (326)
.+.+.++.+...+.+....++.||+|.|
T Consensus 335 ~~GL~ins~~lgi~S~~~~~l~~~~g~r 362 (498)
T KOG0637|consen 335 CLGLMLNSIVLGIYSLLVEKLSRKFGTR 362 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4557888999999999999999999944
No 288
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=44.76 E-value=92 Score=31.77 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=44.4
Q ss_pred HHHHHHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHHHHHHHHhhhh
Q 020441 235 PLIMAALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASIAVVFFIGPYI 290 (326)
Q Consensus 235 ~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~~i~~~i~~~~ 290 (326)
+++..++.|+|....++.-.+++-+...++. ..-+++....-.+|-+++|+++++.
T Consensus 240 ff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~ 296 (735)
T KOG3626|consen 240 FFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFC 296 (735)
T ss_pred HHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4556788999999999998888877666554 3457788888999999999998755
No 289
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=41.44 E-value=1.4e+02 Score=28.25 Aligned_cols=20 Identities=20% Similarity=0.541 Sum_probs=11.2
Q ss_pred hhhHHHHHHHHHHHHHHHHH
Q 020441 136 VRMLLIIPLFAYSGLQQAFV 155 (326)
Q Consensus 136 ~~~lll~p~~~~~g~~~~f~ 155 (326)
+++++++.+...+|.-.+..
T Consensus 31 ~~illLl~LYllQGiP~GL~ 50 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLI 50 (510)
T ss_pred hhHHHHHHHHHHcCCchhHh
Confidence 35556665666667554443
No 290
>TIGR01478 STEVOR variant surface antigen, stevor family. This model represents the stevor branch of the rifin/stevor family (pfam02009) of predicted variant surface antigens as found in Plasmodium falciparum. This model is based on a set of stevor sequences kindly provided by Matt Berriman from the Sanger Center. This is a global model and assesses a penalty for incomplete sequence. Additional fragmentary sequences may be found with the fragment model and a cutoff of 8 bits.
Probab=34.41 E-value=79 Score=28.00 Aligned_cols=26 Identities=15% Similarity=0.264 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Q 020441 294 AMLIVMVVGICVALVGILFLTIQVEK 319 (326)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (326)
.-.++++++.|+-++.|.|+.+|-++
T Consensus 263 iaalvllil~vvliiLYiWlyrrRK~ 288 (295)
T TIGR01478 263 IAALVLIILTVVLIILYIWLYRRRKK 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33455566666777788888766544
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=33.59 E-value=4.6e+02 Score=25.53 Aligned_cols=68 Identities=12% Similarity=0.080 Sum_probs=36.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHHHHHHH-HHHHHHhhhhhhccCCCChhhHH
Q 020441 136 VRMLLIIPLFAYSGLQQAFVWAEFTKEIVTPALGVSGVGGAMAVYGA-FDAICSLAAGRLTTGLPSITFIV 205 (326)
Q Consensus 136 ~~~lll~p~~~~~g~~~~f~~~~~~~~~~~~~lg~~~~~~~~~~~gi-~~~i~~~~~G~l~d~~g~~~~i~ 205 (326)
||.+.+.-+++..++..++... .-.+++....|.+.++++-...-+ +..+..++..|+.++..+.+ ++
T Consensus 27 ~kflpl~Ll~f~I~~ny~~lR~-lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~-vF 95 (509)
T COG3202 27 KKFLPLALLFFCILFNYNLLRS-LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREK-VF 95 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHH-HH
Confidence 4555555555555555555422 111222222344445554443333 45667778889998888775 44
No 292
>PTZ00370 STEVOR; Provisional
Probab=33.23 E-value=83 Score=27.92 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=20.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 020441 282 VVFFIGPYISLQAMLIVMVVGICVALVGILFLTIQVEK 319 (326)
Q Consensus 282 i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (326)
.+...+.+.+.-...++++++.|+-++.|.|+.+|-++
T Consensus 247 AtaAsaaF~Pygiaalvllil~vvliilYiwlyrrRK~ 284 (296)
T PTZ00370 247 ASAASSAFYPYGIAALVLLILAVVLIILYIWLYRRRKN 284 (296)
T ss_pred HHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 33333333333333455566667777888888765443
No 293
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=31.69 E-value=13 Score=36.34 Aligned_cols=119 Identities=17% Similarity=0.102 Sum_probs=2.9
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhccCCCChhhHHHHHHHHHHHHHH-H---HHh--cccCC------------CCCc--
Q 020441 171 SGVGGAMAVYGAFDAICSLAAGRLTTGLPSITFIVSGGAIAQVVVFL-W---ILI--NYSVT------------SGVL-- 230 (326)
Q Consensus 171 ~~~~~~~~~~gi~~~i~~~~~G~l~d~~g~~~~i~~~g~i~~~~~~~-~---~~l--~~~~~------------~~~~-- 230 (326)
+++|++...+-++..+..++..++.+|..|. ..+..|.++..+..+ . -++ .+.++ .+..
T Consensus 38 ~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~ 116 (539)
T PF03137_consen 38 SQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-RWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDS 116 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-ceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccc
Confidence 4788999999999999888888877664333 244445444332221 1 111 01000 0000
Q ss_pred -----------------c------hHHHHHHHHHHhhhhHHhhhhhHhhHHhhccCCch-hhhhHHHHHHHHHHHHHHHH
Q 020441 231 -----------------G------TLYPLIMAALLGIGDGVLNTQLSALLGILFKHDTE-GAFAQLKVWQCASIAVVFFI 286 (326)
Q Consensus 231 -----------------~------~~~~~~~~~l~G~~d~~~~~~~~~il~~~f~~~~~-~~fa~~~~~~~~g~~i~~~i 286 (326)
+ ...+++..++.|+|.+..++.-.+++-|..+++.. .-.+++.....+|-+++|.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~l 196 (539)
T PF03137_consen 117 SSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLL 196 (539)
T ss_dssp -----------------------------------SSS------------------------------------------
T ss_pred cccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHH
Confidence 0 12345567899999999999999999888776653 34668888888899988888
Q ss_pred hhhh
Q 020441 287 GPYI 290 (326)
Q Consensus 287 ~~~~ 290 (326)
++..
T Consensus 197 g~~~ 200 (539)
T PF03137_consen 197 GSFC 200 (539)
T ss_dssp ----
T ss_pred HHHH
Confidence 8543
No 294
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=31.30 E-value=1.2e+02 Score=26.63 Aligned_cols=79 Identities=15% Similarity=0.224 Sum_probs=37.1
Q ss_pred hhhhhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHH-HhHHHHHHHHHH-HhcCCCCCCCCCchhhHHHHH
Q 020441 10 FAASIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFA-SHQFVGNLITLA-VLKDDKGGSTSGTTLLFIVFL 87 (326)
Q Consensus 10 ~~~g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~-~~~iiG~li~~~-~~~~~~~~~~~~~~~~f~~~~ 87 (326)
+=.|.+|+..+....-.- ++.|...| ..+++ .+.+.|-..+-+ ++..+.+...+.+-- |+- .
T Consensus 59 mlgG~lW~~gN~~~vpii------------~~iGLglg--~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln-~~G-~ 122 (254)
T PF07857_consen 59 MLGGALWATGNILVVPII------------KTIGLGLG--MLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLN-YIG-V 122 (254)
T ss_pred HhhhhhhhcCceeehhHh------------hhhhhHHH--HHHHHHHHHHHHHHHhhceeccccccccchhHHH-HHH-H
Confidence 334788887655442222 25564444 44553 345555554432 333222222222211 221 2
Q ss_pred HHHHHHHHHHHHccCCc
Q 020441 88 GVITLGTILMCFLRKEE 104 (326)
Q Consensus 88 ~i~~l~~~l~~~l~~~~ 104 (326)
++.+++.+++.++++..
T Consensus 123 ~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 123 ALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHheeeecCCC
Confidence 34566777777776544
No 295
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=29.72 E-value=5e+02 Score=24.74 Aligned_cols=42 Identities=7% Similarity=-0.159 Sum_probs=26.9
Q ss_pred HHHHhhhhHHhhhhhHhhHHhhccCCc-hhhhhHHHHHHHHHH
Q 020441 239 AALLGIGDGVLNTQLSALLGILFKHDT-EGAFAQLKVWQCASI 280 (326)
Q Consensus 239 ~~l~G~~d~~~~~~~~~il~~~f~~~~-~~~fa~~~~~~~~g~ 280 (326)
+.+.++..........+..++..|... .+-++..|....+|.
T Consensus 376 y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg 418 (510)
T KOG3574|consen 376 YAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGG 418 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcC
Confidence 555555555555556667777766554 456778888887774
No 296
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=25.28 E-value=93 Score=27.40 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=29.2
Q ss_pred hhhhccccceecccchhhhhhcCCCcCcchhhhhHHHHHHHHHhHHHHHHHH
Q 020441 13 SIIWVGEGTYLTAAALSHASNHKLHEGTVIGSFNGEFWGMFASHQFVGNLIT 64 (326)
Q Consensus 13 g~~w~a~~~~~~~~a~~~~~~~~~~~~~~~g~~~gif~~~~~~~~iiG~li~ 64 (326)
...|..|+..+ +-|.+.++ +.|++.|-.+|+-|++--....+..++.
T Consensus 216 ~f~WgiQ~ViL--~lPhEyK~---~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~ 262 (267)
T PF07672_consen 216 FFLWGIQGVIL--NLPHEYKG---YNPKKIGIQFGLIWGFGYIFYTIYDIIL 262 (267)
T ss_pred HHHHhhhHHHh--cChhhhcC---CCcceehhHHHHHHHHHHHHHHHHHHHH
Confidence 45799999876 33433333 3377889888888876654444444433
No 297
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=24.84 E-value=4.2e+02 Score=22.26 Aligned_cols=27 Identities=11% Similarity=0.223 Sum_probs=15.8
Q ss_pred chhhhhHHHHHHH-HHhHHHHHHHHHHH
Q 020441 41 VIGSFNGEFWGMF-ASHQFVGNLITLAV 67 (326)
Q Consensus 41 ~~g~~~gif~~~~-~~~~iiG~li~~~~ 67 (326)
+....+|.+.... ..|..+|..+.-++
T Consensus 31 ~~~l~ig~~~~~~~~lg~~~G~~~~~~i 58 (206)
T TIGR02840 31 LSNLIIAVISGLFIFISMLLGKFLAKFL 58 (206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445555555555 56666777776555
No 298
>PF09964 DUF2198: Uncharacterized protein conserved in bacteria (DUF2198); InterPro: IPR019242 This family of various hypothetical archaeal proteins has no known function.
Probab=23.28 E-value=2.6e+02 Score=19.32 Aligned_cols=53 Identities=9% Similarity=0.073 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccCC
Q 020441 271 QLKVWQCASIAVVFFIGPYISLQAMLIVMVVGICVALV-GILFLTIQVEKAFYS 323 (326)
Q Consensus 271 ~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 323 (326)
.||-+.++--.++...++...-+.+.+.++++-++|+. .|.+..+..+++++|
T Consensus 21 T~n~~vg~~lt~~Li~ASvykGyt~~~~ii~iD~~Sl~aGf~~a~~m~~~~k~~ 74 (74)
T PF09964_consen 21 TYNHYVGTILTVALIAASVYKGYTHTWWIIFIDAVSLTAGFLYAKKMLKHKKKD 74 (74)
T ss_pred hHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 44554544444444444433333334445555556644 555656666555543
No 299
>PF15102 TMEM154: TMEM154 protein family
Probab=23.22 E-value=37 Score=26.85 Aligned_cols=24 Identities=13% Similarity=0.187 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Q 020441 298 VMVVGICVALVGILFLTIQVEKAF 321 (326)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~ 321 (326)
++++++++.+++.....+|.+.|+
T Consensus 66 VLLvlLLl~vV~lv~~~kRkr~K~ 89 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKRKRTKQ 89 (146)
T ss_pred HHHHHHHHHHHHheeEEeecccCC
Confidence 444455555566555555555554
No 300
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=21.23 E-value=2.1e+02 Score=20.48 Aligned_cols=23 Identities=4% Similarity=0.024 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh
Q 020441 297 IVMVVGICVALVGILFLTIQVEK 319 (326)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~ 319 (326)
.++.++.++.++.|+.-.++-+|
T Consensus 38 lvI~~iFil~VilwfvCC~kRkr 60 (94)
T PF05393_consen 38 LVICGIFILLVILWFVCCKKRKR 60 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhh
Confidence 33344445555555544433333
No 301
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=20.49 E-value=6.9e+02 Score=23.18 Aligned_cols=19 Identities=16% Similarity=0.029 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHHHHh
Q 020441 269 FAQLKVWQCASIAVVFFIG 287 (326)
Q Consensus 269 fa~~~~~~~~g~~i~~~i~ 287 (326)
|.+++..|-.|..++..+-
T Consensus 163 fii~~~~qv~gn~issli~ 181 (390)
T KOG3097|consen 163 FIIFQCAQVWGNLISSLIM 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 6688888888866665554
No 302
>PRK11469 hypothetical protein; Provisional
Probab=20.17 E-value=5e+02 Score=21.45 Aligned_cols=22 Identities=9% Similarity=-0.010 Sum_probs=11.8
Q ss_pred hhccCCCChhhHHHHHHHHHHHH
Q 020441 193 RLTTGLPSITFIVSGGAIAQVVV 215 (326)
Q Consensus 193 ~l~d~~g~~~~i~~~g~i~~~~~ 215 (326)
++.++.++| .-++.|.++..+.
T Consensus 157 ~~g~~~g~~-a~~lgG~iLI~iG 178 (188)
T PRK11469 157 FIGSIIGKK-AEILGGLVLIGIG 178 (188)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHH
Confidence 344455666 3556666655443
Done!