BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020446
(326 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c
pdb|3N3C|A Chain A, Crystal Structure Of Native Bovine Pdp1c
Length = 467
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 90/171 (52%), Gaps = 15/171 (8%)
Query: 144 QIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203
++A G+ V + L++AN GDSRA+LG + + G A+ LS++HN E +
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNEREVER 253
Query: 204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA--------EYNREPL----YA 251
+ HP + V+K + R+ GL+ R+ GDV K + E + L Y
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311
Query: 252 KFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 302
KF + P L++EP ++ H L+P D+FL+ A+DGLWE + QD V IV
Sbjct: 312 KFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 18/27 (66%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL 105
G +G++DGH G S+ +++ LF ++
Sbjct: 66 GMLLGVFDGHAGCACSQAVSERLFYYI 92
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 89/171 (52%), Gaps = 15/171 (8%)
Query: 144 QIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIESVRQE 203
++A G+ V + L++AN GDSRA+LG + + G A+ LS++HN E Q
Sbjct: 195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLG-VQEEDGSWSAVTLSNDHNAQNERELQR 253
Query: 204 MHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKA--------EYNREPL----YA 251
+ HP + V+K + R+ GL+ R+ GDV K + E + L Y
Sbjct: 254 LKLEHPKNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYT 311
Query: 252 KFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 302
KF P L++EP ++ H L+P D+FL+ A+DGLWE + QD V IV
Sbjct: 312 KFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIV 362
Score = 28.5 bits (62), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 56 NNLLEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHL 105
+N L + IE +T G +G++DGH G S+ +++ LF ++
Sbjct: 43 SNRLPANAPIEDRRSATTCLQTRGMLLGVFDGHAGCACSQAVSERLFYYI 92
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
pdb|3NMN|D Chain D, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl1 In Complex With Type 2c Protein
Phosphatase Abi1
Length = 319
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 37/228 (16%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV---IKKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L ++++ M D ++K +A + F + ++
Sbjct: 57 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 116
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI 197
+ P+ VGS +V V+ +++AN GDSRAVL R G+ A+ LS +H
Sbjct: 117 IESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR-----GKT-ALPLSVDHKPD- 167
Query: 198 ESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLRE 257
+E + + + V++ N RV G++ +SRSIGD YLK
Sbjct: 168 ----REDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLK----------------- 206
Query: 258 PFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 305
P + +P ++A + D LI ASDG+W+ +++++A ++ +
Sbjct: 207 ----PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKR 250
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With
Abi1
Length = 326
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 37/228 (16%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV---IKKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L ++++ M D ++K +A + F + ++
Sbjct: 69 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSE 128
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI 197
+ P+ VGS +V V+ +++AN GDSRAVL R G+ A+ LS +H
Sbjct: 129 IESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR-----GKT-ALPLSVDHKPD- 179
Query: 198 ESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLRE 257
+E + + + V++ N RV G++ +SRSIGD YLK
Sbjct: 180 ----REDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLK----------------- 218
Query: 258 PFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 305
P + +P ++A + D LI ASDG+W+ +++++A ++ +
Sbjct: 219 ----PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKR 262
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1
Length = 316
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 113/228 (49%), Gaps = 37/228 (16%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDV---IKKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L ++++ M D ++K +A + F + ++
Sbjct: 54 FFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSE 113
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGI 197
+ P+ VGS +V V+ +++AN GDSRAVL R G+ A+ LS +H
Sbjct: 114 IESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR-----GKT-ALPLSVDHKPD- 164
Query: 198 ESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLRE 257
+E + + + V++ N RV G++ +SRSIGD YLK
Sbjct: 165 ----REDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLK----------------- 203
Query: 258 PFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 305
P + +P ++A + D LI ASDG+W+ +++++A ++ +
Sbjct: 204 ----PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKR 247
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Abi2
pdb|3UJK|A Chain A, Crystal Structure Of Protein Phosphatase Abi2
pdb|3UJL|B Chain B, Crystal Structure Of Abscisic Acid Bound Pyl2 In Complex
With Type 2c Protein Phosphatase Abi2
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 37/229 (16%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVI---KKAYQATEDGFFSLVTK 137
F G+YDGHGG + + Y + + L +++ D +K +A + F + ++
Sbjct: 61 FFGVYDGHGGSQVANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSE 120
Query: 138 QWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEV-LAIQLSSEHNVG 196
+ VGS +V V+ +++AN GDSRAVL R G+ LA+ + + +
Sbjct: 121 IETVAHAPETVGSTSVVAVVFPTHIFVANCGDSRAVLCR-----GKTPLALSVDHKPDRD 175
Query: 197 IESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLR 256
E+ R E V++ N RV G++ +SRSIGD YLK
Sbjct: 176 DEAARIEAAGGK-------VIRWNGARVFGVLAMSRSIGDRYLK---------------- 212
Query: 257 EPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNH 305
P + +P +++ D LI ASDGLW+ ++N++ D+ +
Sbjct: 213 -----PSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARKR 256
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In
Complex With The Hab1 Type 2c Phosphatase Catalytic
Domain
pdb|3ZVU|B Chain B, Structure Of The Pyr1 His60pro Mutant In Complex With The
Hab1 Phosphatase And Abscisic Acid
Length = 337
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 62 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 121
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGRLV 178
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 122 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 181
Query: 179 KATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 238
+A + LS +H +E +++ V++ RV G++ +SRSIGD Y
Sbjct: 182 EA------MPLSVDHKPD-----REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRY 230
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
LK P + EP ++ D+ LI ASDGLW+ ++NQ+
Sbjct: 231 LK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 269
Query: 299 VDIVQ 303
+I +
Sbjct: 270 CEIAR 274
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 350
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 75 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 134
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGRLV 178
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 135 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 194
Query: 179 KATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 238
+A + LS +H +E +++ V++ RV G++ +SRSIGD Y
Sbjct: 195 EA------MPLSVDHKPD-----REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRY 243
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
LK P + EP ++ D+ LI ASDGLW+ ++NQ+
Sbjct: 244 LK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 282
Query: 299 VDIVQ 303
+I +
Sbjct: 283 CEIAR 287
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor
Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+
Length = 343
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 68 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 127
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGRLV 178
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 128 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 187
Query: 179 KATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 238
+A + LS +H E + +++ V++ RV G++ +SRSIGD Y
Sbjct: 188 EA------MPLSVDHKPDREDEYARI-----ENAGGKVIQWQGARVFGVLAMSRSIGDRY 236
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
LK P + EP ++ D+ LI ASDGLW+ ++NQ+
Sbjct: 237 LK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 275
Query: 299 VDIVQ 303
+I +
Sbjct: 276 CEIAR 280
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
pdb|3RT0|B Chain B, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of
Abscisic Acid (Aba)
Length = 340
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 65 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELSKRNTGEGRQVQWDKVFTSCFL 124
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGRLV 178
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 125 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 184
Query: 179 KATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 238
+A + LS +H +E +++ V++ RV G++ +SRSIGD Y
Sbjct: 185 EA------MPLSVDHKPD-----REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRY 233
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
LK P + EP ++ D+ LI ASDGLW+ ++NQ+
Sbjct: 234 LK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 272
Query: 299 VDIVQ 303
+I +
Sbjct: 273 CEIAR 277
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid
Receptor Pyl2 Mutant A93f In Complex With Type 2c
Protein Phosphatase Hab1
Length = 341
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 66 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 125
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGRLV 178
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 126 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 185
Query: 179 KATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 238
+A + LS +H +E +++ V++ RV G++ +SRSIGD Y
Sbjct: 186 EA------MPLSVDHKPD-----REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRY 234
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
LK P + EP ++ D+ LI ASDGLW+ ++NQ+
Sbjct: 235 LK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 273
Query: 299 VDIVQ 303
+I +
Sbjct: 274 CEIAR 278
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex
With Hab1
Length = 321
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 52/245 (21%)
Query: 79 GTFIGIYDGHGGPETSRYINDHLFQHL------------KRFTSEQQSMSVDVIKKAYQA 126
G F G+YDGHGG + + Y D L L KR T E + + D + +
Sbjct: 51 GHFFGVYDGHGGHKVADYCRDRLHFALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFL 110
Query: 127 TEDGFF------SLVTKQWPMKPQIAA--VGSCCLVGVISCGTLYIANLGDSRAVLGRLV 178
T DG ++V + +A+ VGS +V ++ + ++N GDSRAVL R
Sbjct: 111 TVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGK 170
Query: 179 KATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 238
+A + LS +H +E +++ V++ RV G++ +SRSIGD Y
Sbjct: 171 EA------MPLSVDHKPD-----REDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRY 219
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
LK P + EP ++ D+ LI ASDGLW+ ++NQ+
Sbjct: 220 LK---------------------PYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEV 258
Query: 299 VDIVQ 303
+I +
Sbjct: 259 CEIAR 263
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE
COMPLEXED With Zn2+
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 100/239 (41%), Gaps = 45/239 (18%)
Query: 80 TFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQW 139
+F +YDGHGG E ++Y + HL LK + + +K+A+ F Q
Sbjct: 52 SFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAFLG-----FDATLLQE 106
Query: 140 PMKPQIAAV---------------GSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEV 184
+ ++ + G +V ++ LY+AN GDSR V+ R G+
Sbjct: 107 KVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCR----NGKA 162
Query: 185 LAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEY 244
L + + +E R E V L RV G + +SR+IGD K
Sbjct: 163 LEMSFDHKPEDTVEYQRIEKAGGR------VTLD---GRVNGGLNLSRAIGDHGYK---M 210
Query: 245 NREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQ 303
N+ P + ++S+ P I + P D+F++ A DG+W ++++ V VQ
Sbjct: 211 NKSL---------PAEEQMISALPDIEKITVGPEDEFMVLACDGIWNFMTSEQVVQFVQ 260
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE
PHOSPHATASE 2C AT 2 A Resolution
Length = 382
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 59 LEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVD 118
+ED G S LES +F +YDGH G + ++Y +HL H+ + S
Sbjct: 36 MEDAHTAVIGLPSGLESW---SFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP 92
Query: 119 VIKKAYQATEDGFFSLVTKQWPM--KPQIAAVGSCCLVGV-ISCGTLYIANLGDSRAVLG 175
++ GF + M K A VGV IS Y N GDSR +L
Sbjct: 93 SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC 152
Query: 176 RLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHN---VWRVKGLIQVSR 232
R N + Q+ +P + + + + RV G + VSR
Sbjct: 153 R-----------------NRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSR 195
Query: 233 SIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHEL-QPFDQFLIFASDGLWE 291
++GD + K + + P + ++S EP + E + DQF+I A DG+W+
Sbjct: 196 ALGD-FDYKCVHGKGPT-----------EQLVSPEPEVHDIERSEEDDQFIILACDGIWD 243
Query: 292 HLSNQDAVDIVQN 304
+ N++ D V++
Sbjct: 244 VMGNEELCDFVRS 256
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 3 Mm Of Mn2+
pdb|3FXK|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 10 Mm Of Mn2+
pdb|3FXL|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 1 Mm Of Mn2+
pdb|3FXM|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Citrate At 10 Mm Of Mn2+
pdb|3FXO|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a)
Bound With Phosphate At 1 Mm Of Mn2+
Length = 390
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 39/253 (15%)
Query: 59 LEDQSQIESGPLSTLESGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVD 118
+ED G S LES +F +YDGH G + ++Y +HL H+ + S
Sbjct: 36 MEDAHTAVIGLPSGLESW---SFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAP 92
Query: 119 VIKKAYQATEDGFFSLVTKQWPMKPQIAAV---GSCCLVGVISCGTLYIANLGDSRAVLG 175
++ GF + M + GS + +IS Y N GDSR +L
Sbjct: 93 SVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLC 152
Query: 176 RLVKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHN---VWRVKGLIQVSR 232
R N + Q+ +P + + + + RV G + VSR
Sbjct: 153 R-----------------NRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSR 195
Query: 233 SIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHEL-QPFDQFLIFASDGLWE 291
++GD + K + + P + ++S EP + E + DQF+I A DG+W+
Sbjct: 196 ALGD-FDYKCVHGKGPT-----------EQLVSPEPEVHDIERSEEDDQFIILACDGIWD 243
Query: 292 HLSNQDAVDIVQN 304
+ N++ D V++
Sbjct: 244 VMGNEELCDFVRS 256
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
pdb|2P8E|B Chain B, Crystal Structure Of The SerineTHREONINE PHOSPHATASE
Domain Of Human Ppm1b
Length = 307
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 109/245 (44%), Gaps = 50/245 (20%)
Query: 77 PYG----TFIGIYDGHGGPETSRYINDHLFQHL---KRFTSEQQS-----MSVDVIKKAY 124
P+G +F +YDGH G + Y + HL +H+ + F + +S +SV+ +K
Sbjct: 49 PHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALELSVENVKNGI 108
Query: 125 QATEDGFFSL---VTKQWPMKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKAT 181
+ GF + + ++ + GS + +IS +Y N GDSRAVL R
Sbjct: 109 RT---GFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYR----N 161
Query: 182 GEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHN---VWRVKGLIQVSRSIGDVY 238
G+V S+ Q+ +P + + + + RV G + VSR++GD Y
Sbjct: 162 GQVC---FST----------QDHKPCNPREKERIQNAGGSVMIQRVNGSLAVSRALGD-Y 207
Query: 239 LKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDA 298
K + P + ++S EP + D+F+I A DG+W+ +SN++
Sbjct: 208 DYKCVDGKGPT-----------EQLVSPEPEVYEILRAEEDEFIILAXDGIWDVMSNEEL 256
Query: 299 VDIVQ 303
+ V+
Sbjct: 257 CEYVK 261
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k
Length = 274
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
+ +YDGHGGP + + + H+ + + +++++ ++ A+ + F S +
Sbjct: 37 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLET-LLTLAFLEIDKAFSSHA--RLS 93
Query: 141 MKPQIAAVGSCCLVGVISCGT-LYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIES 199
+ G+ V ++ G L +A++GDSRA+L R K ++L+ +H
Sbjct: 94 ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGK------PMKLTIDHT---PE 144
Query: 200 VRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPF 259
+ E + + V G + ++RSIGD+ LK + EP + +L
Sbjct: 145 RKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLH--- 201
Query: 260 RKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQ 303
D FL+ +DG+ +++Q+ D V
Sbjct: 202 ----------------HADDSFLVLTTDGINFMVNSQEICDFVN 229
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid
Dehydrogenase Phosphatase With Mg (Ii) Ions At The
Active Site
Length = 389
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 32/223 (14%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
+ +YDGHGGP + + + H+ + + +++++ ++ A+ + F S +
Sbjct: 151 YFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLET-LLTLAFLEIDKAFSSHA--RLS 207
Query: 141 MKPQIAAVGSCCLVGVISCGT-LYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNVGIES 199
+ G+ V ++ G L +A++GDSRA+L R K ++L+ +H
Sbjct: 208 ADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGK------PMKLTIDHT---PE 258
Query: 200 VRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPF 259
+ E + + V G + ++RSIGD+ LK + EP + +L
Sbjct: 259 RKDEKERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLH--- 315
Query: 260 RKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 302
D FL+ +DG+ +++Q+ D V
Sbjct: 316 ----------------HADDSFLVLTTDGINFMVNSQEICDFV 342
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex
pdb|2POP|C Chain C, The Crystal Structure Of Tab1 And Bir1 Complex
Length = 353
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 41/232 (17%)
Query: 83 GIYDGHGGPETSRYINDHLFQHL--KRFTSEQQSMSVD-VIKKAYQATEDGFFSLVTKQW 139
G+++G+ G + ++ L L + +E V V+ +A+ E F +
Sbjct: 68 GVFNGYDGNRVTNFVAQRLSAELLLGQLNAEHAEADVRRVLLQAFDVVERSFLESIDDAL 127
Query: 140 PMKPQIA-----------AVGSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAI- 187
K + + G+ +V V+ LY+AN+G +RA+ L K+T + L +
Sbjct: 128 AEKASLQLERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRAL---LCKSTVDGLQVT 184
Query: 188 QLSSEHNVGIESVRQEMHSMHPDDSQIVVLKHNVWRVKGLI---QVSRSIGDVYLKKAEY 244
QL+ +H E + + D +I + G+I + +R IGD +K
Sbjct: 185 QLNVDHTTENEDELFRLSQLGLDAGKI--------KQVGIICGQESTRRIGDYKVKYGYT 236
Query: 245 NREPLYAKFRLREPFRKPILSSEPSISAHELQPFD---QFLIFASDGLWEHL 293
+ + L A KPI+ +EP I H QP D FL+ S+GL++ L
Sbjct: 237 DIDLLSA------AKSKPII-AEPEI--HGAQPLDGVTGFLVLMSEGLYKAL 279
>pdb|2POM|A Chain A, Tab1 With Manganese Ion
Length = 372
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 149 GSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAI-QLSSEHNVGIESVRQEMHSM 207
G+ +V V+ LY+AN+G +RA+ L K+T + L + QL+ +H E + +
Sbjct: 167 GAMAVVAVLLNNKLYVANVGTNRAL---LCKSTVDGLQVTQLNVDHTTENEDELFRLSQL 223
Query: 208 HPDDSQIVVLKHNVWRVKGLI---QVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPIL 264
D +I + G+I + +R IGD +K + + L A KPI+
Sbjct: 224 GLDAGKI--------KQVGIICGQESTRRIGDYKVKYGYTDIDLLSAA------KSKPII 269
Query: 265 SSEPSISAHELQPFD---QFLIFASDGLWEHL 293
+EP I H QP D FL+ S+GL++ L
Sbjct: 270 -AEPEI--HGAQPLDGVTGFLVLMSEGLYKAL 298
>pdb|2J4O|A Chain A, Structure Of Tab1
Length = 401
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 27/152 (17%)
Query: 149 GSCCLVGVISCGTLYIANLGDSRAVLGRLVKATGEVLAI-QLSSEHNVGIESVRQEMHSM 207
G+ +V V+ LY+AN+G +RA+ L K+T + L + QL+ +H E + +
Sbjct: 165 GAMAVVAVLLNNKLYVANVGTNRAL---LCKSTVDGLQVTQLNVDHTTENEDELFRLSQL 221
Query: 208 HPDDSQIVVLKHNVWRVKGLI---QVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPIL 264
D +I + G+I + +R IGD +K + + L A KPI+
Sbjct: 222 GLDAGKI--------KQVGIICGQESTRRIGDYKVKYGYTDIDLLSAA------KSKPII 267
Query: 265 SSEPSISAHELQPFD---QFLIFASDGLWEHL 293
+EP I H QP D FL+ S+GL++ L
Sbjct: 268 -AEPEI--HGAQPLDGVTGFLVLMSEGLYKAL 296
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase
Kinase Kinase 7 Interacting Protein 1 From Anopheles
Gambiae
Length = 358
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 84/197 (42%), Gaps = 23/197 (11%)
Query: 99 DHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQIAAVGSCCLVGVIS 158
D + H+ T+ Q +S D + + Y+ ++ F V ++ +VGS ++ +I
Sbjct: 107 DSINPHVATKTAIQLHLSADGMNQ-YEISQQ--FENVLQKLDSLNNALSVGSSAVLALIH 163
Query: 159 CGTLYIANLGDSRAVLGRLVKATGEVLAIQLSSEHNV--GIESVRQEMHSMHPDDSQIVV 216
LY+ N+G+ RA+L + + QLS +HN+ E+ R + + + V
Sbjct: 164 RSHLYLGNIGNCRALLCK-TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVP 222
Query: 217 LKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQ 276
L +R IG+ YL KA Y F L +P++ + ++
Sbjct: 223 LYS-----------TRCIGN-YLGKAGYKD----CNF-LSSATAEPVIFEPEIVGGIQIT 265
Query: 277 PFDQFLIFASDGLWEHL 293
P +FL+ S GL L
Sbjct: 266 PACRFLVLMSSGLCRAL 282
>pdb|3ITE|A Chain A, The Third Adenylation Domain Of The Fungal Sidn Non-
Ribosomal Peptide Synthetase
pdb|3ITE|B Chain B, The Third Adenylation Domain Of The Fungal Sidn Non-
Ribosomal Peptide Synthetase
Length = 562
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 253 FRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPHSVRYL 312
F LR+ + + EL P + L + E+LS QD DI+ N+P ++
Sbjct: 120 FLLRDSRAAXAFVCDNNFDGVELPPETKVLDTKNQSFIENLSTQDTSDILNNYPENLDAY 179
Query: 313 SVYNS 317
+Y S
Sbjct: 180 LLYTS 184
>pdb|2J82|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
From Thermosynechococcus Elongatus
pdb|2J86|A Chain A, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
pdb|2J86|B Chain B, Structural Analysis Of The Pp2c Family Phosphatase Tppha
Of Thermosynechococcus Elongatus
Length = 240
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 95/231 (41%), Gaps = 66/231 (28%)
Query: 87 GH-GGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQI 145
GH GG E SR DH+ Q+L+ + Q V ++++A+ A + +Q
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHA----IVEQQRQNSAR 93
Query: 146 AAVGSCCLVGVIS--CGTLYIANLGDSRAVLGR---LVKATGE----VLAIQLSSEHNVG 196
A +G+ +V ++ + A++GDSR R L + T + A+QL S +
Sbjct: 94 ADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQLGS---LT 150
Query: 197 IESVRQEMHSMHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFRLR 256
IE RQ HP WR +S+ +G RE L
Sbjct: 151 IEQARQ-----HP------------WRHV----LSQCLG----------REDL------- 172
Query: 257 EPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIVQNHPH 307
S+ I +L+P D+ L+ SDGL E L++ D + I + P+
Sbjct: 173 ---------SQIDIQPIDLEPGDR-LLLCSDGLTEELTD-DVISIYLSEPN 212
>pdb|2BX6|A Chain A, Crystal Structure Of The Human Retinitis Pigmentosa
Protein 2 (Rp2)
Length = 350
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 178 VKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVL---KHNVWRVKGLIQ--VSR 232
+ T E+ A+++S+E N I + + D+S +VVL + + + LI V +
Sbjct: 201 IPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVLFAGDYTIANARKLIDEMVGK 260
Query: 233 SIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSIS 271
V K+ E FR + P P+L+ P I+
Sbjct: 261 GFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIA 299
>pdb|3BH6|B Chain B, Crystal Structure Of The Rp2-Arl3 Complex Bound To Gppnhp
pdb|3BH7|B Chain B, Crystal Structure Of The Rp2-Arl3 Complex Bound To
Gdp-Alf4
Length = 352
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 178 VKATGEVLAIQLSSEHNVGIESVRQEMHSMHPDDSQIVVL---KHNVWRVKGLIQ--VSR 232
+ T E+ A+++S+E N I + + D+S +VVL + + + LI V +
Sbjct: 203 IPTTEELKAVRVSTEANRSIVPISRGQRQKSSDESCLVVLFAGDYTIANARKLIDEMVGK 262
Query: 233 SIGDVYLKKAEYNREPLYAKFRLREPFRKPILSSEPSIS 271
V K+ E FR + P P+L+ P I+
Sbjct: 263 GFFLVQTKEVSMKAEDAQRVFREKAPDFLPLLNKGPVIA 301
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|B Chain B, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
pdb|2I44|C Chain C, Crystal Structure Of Serine-Threonine Phosphatase 2c From
Toxoplasma Gondii
Length = 324
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 264 LSSEPSISAHELQPFDQFLIFASDGLWEHLSNQDAVDIV 302
LS++P + + P + I A+DGLW+ S AV+I
Sbjct: 243 LSNQPDVRVVRVTPQHRVXILATDGLWDVXSAAQAVEIA 281
>pdb|2XZV|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 87 GH-GGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWPMKPQI 145
GH GG E SR DH+ Q+L+ + Q V ++++A+ A + +Q
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAANHA----IVEQQRQNSAR 93
Query: 146 AAVGSCCLVGVIS--CGTLYIANLGDSR 171
A +G+ +V ++ + A++GDSR
Sbjct: 94 ADMGTTAVVILLDEKGDRAWCAHVGDSR 121
>pdb|2C7F|A Chain A, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With
1,5-Alpha-L- Arabinotriose.
pdb|2C7F|B Chain B, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With
1,5-Alpha-L- Arabinotriose.
pdb|2C7F|C Chain C, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With
1,5-Alpha-L- Arabinotriose.
pdb|2C7F|D Chain D, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With
1,5-Alpha-L- Arabinotriose.
pdb|2C7F|E Chain E, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With
1,5-Alpha-L- Arabinotriose.
pdb|2C7F|F Chain F, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With
1,5-Alpha-L- Arabinotriose.
pdb|2C8N|A Chain A, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With 1,3-Linked
Arabinoside Of Xylobiose.
pdb|2C8N|B Chain B, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With 1,3-Linked
Arabinoside Of Xylobiose.
pdb|2C8N|C Chain C, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With 1,3-Linked
Arabinoside Of Xylobiose.
pdb|2C8N|D Chain D, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With 1,3-Linked
Arabinoside Of Xylobiose.
pdb|2C8N|E Chain E, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With 1,3-Linked
Arabinoside Of Xylobiose.
pdb|2C8N|F Chain F, The Structure Of A Family 51 Arabinofuranosidase, Araf51,
From Clostridium Thermocellum In Complex With 1,3-Linked
Arabinoside Of Xylobiose
Length = 513
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 238 YLKKAEYNREPLYAKFRLREPFRKPILSSEPSISAHELQPFDQFLIFASDGLWEHLSNQD 297
Y E + AK + F + ++++ I A + D +L F +W H +N+D
Sbjct: 254 YYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNNED 313
Query: 298 AVDIVQNHP 306
A +I+QN P
Sbjct: 314 A-NIMQNEP 321
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
pdb|2ISN|B Chain B, Crystal Structure Of A Phosphatase From A Pathogenic
Strain Toxoplasma Gondii
Length = 364
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 75 SGPYGTFIGIYDGHGGPETSRYINDHLFQHLKRFT 109
S P ++DGH G TS+Y H +HL + +
Sbjct: 39 SRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLS 73
>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase
pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
Maltase- Glucoamylase In Complex With Acarbose
Length = 908
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 17/111 (15%)
Query: 210 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKF-----RLREPFRKPIL 264
+DS+I L + + V S D ++ ++ P +A F R++ + IL
Sbjct: 304 NDSEIASLYDEMVAAQIPYDVQYSDIDYMERQLDFTLSPKFAGFPALINRMKADGMRVIL 363
Query: 265 SSEPSISAHELQPF---------DQFLIFASDG--LWEHLSNQDAVDIVQN 304
+P+IS +E QP+ D F+ + +DG +W + D D+V N
Sbjct: 364 ILDPAISGNETQPYPAFTRGVEDDVFIKYPNDGDIVWGKVW-PDFPDVVVN 413
>pdb|2CM1|A Chain A, Crystal Structure Of The Catalytic Domain Of Serine
Threonine Protein Phosphatase Pstp In Complex With 2
Manganese Ions
Length = 260
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 81/201 (40%), Gaps = 21/201 (10%)
Query: 81 FIGIYDGHGGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQATEDGFFSLVTKQWP 140
+ + DG GG + + L ++ D++ K A G S + Q
Sbjct: 53 LLALADGMGGHAAGEVASQLVIAALAHLDDDEPGG--DLLAKLDAAVRAGN-SAIAAQVE 109
Query: 141 MKPQIAAVGSCCLVGVISCGTLYIANLGDSRAVL---GRLVKATGEVLAIQ-LSSEHNVG 196
M+P + +G+ + + L + ++GDSR L G L + T + +Q L E +
Sbjct: 110 MEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGRI- 168
Query: 197 IESVRQEMHSMHPDDSQIV--VLKHNVWRVKGLIQVSRSIGDVYLKKAEYNREPLYAKFR 254
+E HS HP S I+ + H V L GD YL ++ +P+ +
Sbjct: 169 ---TPEEAHS-HPQRSLIMRALTGHEVEPT--LTMREARAGDRYLLCSDGLSDPVSDETI 222
Query: 255 LREPFRKPILSSEPSISAHEL 275
L E + P E + SAH L
Sbjct: 223 L-EALQIP----EVAESAHRL 238
>pdb|2XL4|A Chain A, Lnta, A Virulence Factor From Listeria Monocytogenes
Length = 175
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Query: 96 YINDHLFQHL---KRFTSEQQSMSVDVIKKAYQATEDG-FFSLVTKQW 139
+ ND++ Q + KR+ +Q+ +S+D IK+A +A+ D F + K+W
Sbjct: 69 FANDNINQXIGTXKRY--QQEILSIDAIKRASEASADTEAFKKIFKEW 114
>pdb|2Y09|A Chain A, The Cyanobacterial Pp2c-Like Phosphatase Tppha Requires
Three Metals In The Catalytic Center For Efficient
Catalysis
Length = 240
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 87 GH-GGPETSRYINDHLFQHLKRFTSEQQSMSVDVIKKAYQAT 127
GH GG E SR DH+ Q+L+ + Q V ++++A+ A
Sbjct: 38 GHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQAFLAA 79
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,650,837
Number of Sequences: 62578
Number of extensions: 393529
Number of successful extensions: 981
Number of sequences better than 100.0: 35
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 40
length of query: 326
length of database: 14,973,337
effective HSP length: 99
effective length of query: 227
effective length of database: 8,778,115
effective search space: 1992632105
effective search space used: 1992632105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)