BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020448
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SEE4|PIRL_SOLLC Pirin-like protein OS=Solanum lycopersicum PE=2 SV=1
Length = 291
Score = 444 bits (1141), Expect = e-124, Method: Compositional matrix adjust.
Identities = 206/288 (71%), Positives = 242/288 (84%)
Query: 37 SPCFSRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPAGFPDHP 96
S FSRPR+V KKV + ++GDGA+VRR+IGR +L++LDPFLMLDEFSVS PAGFPDHP
Sbjct: 4 SSIFSRPRLVVKKVLARAQNEGDGAIVRRSIGRPELQNLDPFLMLDEFSVSQPAGFPDHP 63
Query: 97 HRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAGEGVQNGLQLWI 156
HRGFETVTYMLQG THQDF+GHKGTI TGDVQWMTAGRGIVHSEMPAG G Q GLQLWI
Sbjct: 64 HRGFETVTYMLQGAFTHQDFAGHKGTIRTGDVQWMTAGRGIVHSEMPAGPGTQKGLQLWI 123
Query: 157 NLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKP 216
NLSS DKMIEPRYQE+ ++I +AE DGV V I+AGESMG +S V+TRTPTM+LDFTLKP
Sbjct: 124 NLSSKDKMIEPRYQELLHQDIPKAEKDGVSVTILAGESMGKKSQVFTRTPTMYLDFTLKP 183
Query: 217 RAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFV 276
++ HQ IPETWNAF+Y +EGEG FG+ +S+ AH+ LVL G+GLS WN+SSK LRFV
Sbjct: 184 GSEHHQPIPETWNAFLYIVEGEGAFGSSDSTTTPAHHCLVLGPGEGLSVWNKSSKPLRFV 243
Query: 277 LIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAKYWRSQ 324
LI GQP+NEPVVQYGPFVMN+++EI Q +DYQL KNGFE ++ W S+
Sbjct: 244 LIGGQPINEPVVQYGPFVMNTKSEIMQAYQDYQLGKNGFERSRQWYSK 291
>sp|Q9ZW82|PIRL2_ARATH Pirin-like protein At2g43120 OS=Arabidopsis thaliana GN=At2g43120
PE=2 SV=3
Length = 321
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 217/305 (71%), Positives = 249/305 (81%), Gaps = 10/305 (3%)
Query: 27 IRNI--MSASDESPCFSRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEF 84
IRNI MS+S SRP V KKV KL +GDGAVVRR I R + + LDPFLMLDEF
Sbjct: 20 IRNIKSMSSSTSQDFVSRP--VIKKVFAKLQKEGDGAVVRRGISRSEQKLLDPFLMLDEF 77
Query: 85 SVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPA 144
SVSPPAGFPDHPHRGFETVTY+L+GGITHQDF GHKGTI+ GDVQWMTAGRGI+HSEMP
Sbjct: 78 SVSPPAGFPDHPHRGFETVTYVLEGGITHQDFKGHKGTIYAGDVQWMTAGRGIIHSEMPE 137
Query: 145 GEGVQNGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTR 204
E V GLQLWINLSS++KMIEP YQE+ +I +AE +GVEV++IAGESMG++SPVYTR
Sbjct: 138 -EEVNKGLQLWINLSSNEKMIEPNYQELSHSDIPKAEQNGVEVKVIAGESMGIQSPVYTR 196
Query: 205 TPTMFLDFTLKPRAQIHQSIPETWNAFVYTI---EGEGVFGTVNSSAVSAHNVLVLSLG- 260
TPTMFLDFTL+P AQIHQ++PE+WNAF Y + EG GVF + NSS + AH+V+V G
Sbjct: 197 TPTMFLDFTLQPGAQIHQNVPESWNAFAYILESGEGGGVFSSSNSSPIPAHSVVVFGPGN 256
Query: 261 DGLSAWNR-SSKQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAK 319
DG+S WN+ SSKQLRFVLIAG+P+ EPVVQYGPFVMN+QAEID TIEDY KNGFE AK
Sbjct: 257 DGVSVWNKSSSKQLRFVLIAGEPIGEPVVQYGPFVMNTQAEIDMTIEDYHYGKNGFEMAK 316
Query: 320 YWRSQ 324
YWRSQ
Sbjct: 317 YWRSQ 321
>sp|Q9LX49|PRN1_ARATH Pirin-1 OS=Arabidopsis thaliana GN=PRN1 PE=1 SV=1
Length = 287
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/281 (67%), Positives = 228/281 (81%), Gaps = 3/281 (1%)
Query: 41 SRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPAGFPDHPHRGF 100
S PR+V KKV KL +G+GAVVR I + D + LDPF++L EFS S AGFPDHPHRGF
Sbjct: 7 SVPRIVIKKVLAKLEKEGEGAVVRNGITKIDQKLLDPFVLLVEFSFSLSAGFPDHPHRGF 66
Query: 101 ETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAGEGVQNGLQLWINLSS 160
E+VTYMLQGGI H+D GHKGTI GDVQWMTAGRGI+HSE P E V NGLQLWINL S
Sbjct: 67 ESVTYMLQGGIIHKDPKGHKGTIQAGDVQWMTAGRGIIHSEFPE-EEVNNGLQLWINLPS 125
Query: 161 SDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQI 220
++KM EP+Y+E+ S +I RAE +GVEV++IAG+SMG++SPVYTRTPTMFLDFTLKP +Q
Sbjct: 126 TEKMTEPKYKELSSLDIPRAEENGVEVKVIAGDSMGIKSPVYTRTPTMFLDFTLKPGSQT 185
Query: 221 HQSIPETWNAFVYTIEG-EGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRS-SKQLRFVLI 278
HQ++PE+W AF Y IEG EGVFG++NSSA+SAH+V+V GD +S WN+S S+ LRF+LI
Sbjct: 186 HQTVPESWTAFAYIIEGDEGVFGSLNSSAISAHHVVVFGPGDLVSVWNKSTSRSLRFLLI 245
Query: 279 AGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAK 319
AG+P+ EPVVQ GPFVMNSQAEID +DYQ KNGFE AK
Sbjct: 246 AGEPIGEPVVQCGPFVMNSQAEIDMAFDDYQNAKNGFEMAK 286
>sp|Q9LPS9|PIRL1_ARATH Pirin-like protein At1g50590 OS=Arabidopsis thaliana GN=At1g50590
PE=2 SV=1
Length = 310
Score = 360 bits (924), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 177/299 (59%), Positives = 222/299 (74%), Gaps = 9/299 (3%)
Query: 36 ESPCFSRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPAGFPDH 95
E + R+V KK+ + H+G GAVVRR+IGR + R DPFL+LDEFSVS PAGFPDH
Sbjct: 5 EKSSATNTRLVVKKLFARQLHEGFGAVVRRSIGRFEFRYFDPFLVLDEFSVSAPAGFPDH 64
Query: 96 PHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPA----GEGVQNG 151
PHRGFETVTYML+G I H+D GHKG I G +QWMTAG+GIVHSEMP+ G G
Sbjct: 65 PHRGFETVTYMLEGEILHEDCEGHKGVIREGGLQWMTAGKGIVHSEMPSSNSNGITHNKG 124
Query: 152 LQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLD 211
LQLWINLSS K++EP YQEI S++I E DGV VR+IAGE GV+S + TRTPTM+LD
Sbjct: 125 LQLWINLSSRQKLVEPSYQEIESKDIAETEKDGVRVRVIAGEWNGVKSKICTRTPTMYLD 184
Query: 212 FTLKPRAQIHQSIPETWNAFVYTIEGEGVFG--TVNSSAVSAHNVLVLSL-GDGLSAWNR 268
FTL P ++I Q IP WNAFVY ++G G FG + SA +AH++LVL L GD L AWN
Sbjct: 185 FTLSPGSRISQPIPLHWNAFVYVLQGHGHFGDSKLQHSAAAAHHLLVLGLGGDMLEAWNG 244
Query: 269 SSKQ--LRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAKYWRSQS 325
S LRF+L+AG+P+ EP+VQ+GPFVMN+Q EID+TI+D++ +NGFE A++W+SQ+
Sbjct: 245 SDSGLPLRFILVAGEPIGEPMVQFGPFVMNTQEEIDETIDDFENFRNGFEKARHWKSQA 303
>sp|Q9LX45|PIRL4_ARATH Putative pirin-like protein At3g59260 OS=Arabidopsis thaliana
GN=At3g59260 PE=3 SV=1
Length = 271
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 173/258 (67%), Positives = 203/258 (78%), Gaps = 3/258 (1%)
Query: 69 RGDLRSLDPFLMLDEFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDV 128
+ D LDPF+ L EFSVSPP GF DHPHRGFE+VTYM QGGI HQD +G+KGTIH GDV
Sbjct: 15 KSDHELLDPFVSLVEFSVSPPGGFKDHPHRGFESVTYMFQGGIIHQDCNGNKGTIHEGDV 74
Query: 129 QWMTAGRGIVHSEMPAGEGVQNGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVR 188
QWMTAGRGI+HSEMP E V GLQLWINL SS KMIEP+ EI S EI A+ GVEV+
Sbjct: 75 QWMTAGRGIIHSEMPE-EQVNKGLQLWINLPSSAKMIEPKNIEISSSEIPSADDYGVEVK 133
Query: 189 IIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEG-EGVFGTVNSS 247
+IAGESMGV+SP YT+TP MFLDFTL P+AQ HQ++PE+W AF Y +EG EGVF + +SS
Sbjct: 134 VIAGESMGVKSPFYTKTPIMFLDFTLDPKAQTHQAVPESWTAFAYIVEGDEGVFSSSDSS 193
Query: 248 AVSAHNVLVLSLGDGLSAWNRS-SKQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIE 306
V AHNV+V GD +S WN S S+ LRF+LIAG+P+ EPVVQ+GPFVMNSQ EI+ TI
Sbjct: 194 TVQAHNVVVFGTGDEVSVWNTSNSRPLRFLLIAGEPIGEPVVQHGPFVMNSQDEIEMTIG 253
Query: 307 DYQLCKNGFENAKYWRSQ 324
DY+ NGFE AK+WRS+
Sbjct: 254 DYRNGMNGFEMAKHWRSE 271
>sp|O00625|PIR_HUMAN Pirin OS=Homo sapiens GN=PIR PE=1 SV=1
Length = 290
Score = 324 bits (830), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 151/283 (53%), Positives = 204/283 (72%), Gaps = 2/283 (0%)
Query: 44 RMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPAGFPDHPHRGFETV 103
+ V V + +G GA VRR+IGR +L++LDPFL+ DEF P GFPDHPHRGFETV
Sbjct: 5 KKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFLLFDEFKGGRPGGFPDHPHRGFETV 64
Query: 104 TYMLQGG-ITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAGEGVQNGLQLWINLSSSD 162
+Y+L+GG + H+DF GH G ++ GD+QWMTAGRGI+H+EMP E +GLQLW+NL SS+
Sbjct: 65 SYLLEGGSMAHEDFCGHTGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVNLRSSE 124
Query: 163 KMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQ 222
KM+EP+YQE+ SEEI + DGV V +I+GE++G++S VYTRTPT++LDF L P A+ Q
Sbjct: 125 KMVEPQYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDPGAKHSQ 184
Query: 223 SIPETWNAFVYTIEGEGVFGTVNS-SAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQ 281
IP+ W +F+YTI G+ G ++ + H+ VL GD + N+ K+ FVLIAG+
Sbjct: 185 PIPKGWTSFIYTISGDVYIGPDDAQQKIEPHHTAVLGEGDSVQVENKDPKRSHFVLIAGE 244
Query: 282 PLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAKYWRSQ 324
PL EPV+Q+GPFVMN+ EI Q I D++ KNGFE AK W+S+
Sbjct: 245 PLREPVIQHGPFVMNTNEEISQAILDFRNAKNGFERAKTWKSK 287
>sp|Q9D711|PIR_MOUSE Pirin OS=Mus musculus GN=Pir PE=2 SV=1
Length = 290
Score = 315 bits (807), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 197/270 (72%), Gaps = 2/270 (0%)
Query: 57 DGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPAGFPDHPHRGFETVTYMLQGG-ITHQD 115
+G GA VRR+IGR +L++LDPFL+ DEF P GFPDHPHRGFETV+Y+L+GG + H+D
Sbjct: 18 EGVGARVRRSIGRPELKNLDPFLLFDEFKGGKPGGFPDHPHRGFETVSYLLEGGSMAHED 77
Query: 116 FSGHKGTIHTGDVQWMTAGRGIVHSEMPAGEGVQNGLQLWINLSSSDKMIEPRYQEIPSE 175
F GH G ++ GD+QWMTAGRGI+H+EMP E +GLQLW+NL S+KM+ P+YQE+ SE
Sbjct: 78 FCGHVGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVNLRRSEKMVAPQYQELKSE 137
Query: 176 EIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTI 235
EI + DGV V +I+GE++G++S VYTRTPT++LDF L A+ Q IP+ W +F+YTI
Sbjct: 138 EIPKPTKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDQGAKHSQPIPKGWTSFIYTI 197
Query: 236 EGEGVFGTVNS-SAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQYGPFV 294
G+ G ++ + H+ VL GD + N+ K+ FVLIAG+PL EPVVQ+GPFV
Sbjct: 198 SGDVYIGPDDAQQKIEPHHTAVLGEGDAVQLENKDPKRSHFVLIAGEPLREPVVQHGPFV 257
Query: 295 MNSQAEIDQTIEDYQLCKNGFENAKYWRSQ 324
MN+ EI Q I D++ KNGFE A+ W+S+
Sbjct: 258 MNTNEEISQAILDFRNAKNGFEGARTWKSK 287
>sp|Q5M827|PIR_RAT Pirin OS=Rattus norvegicus GN=Pir PE=1 SV=1
Length = 291
Score = 312 bits (799), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 148/283 (52%), Positives = 199/283 (70%), Gaps = 2/283 (0%)
Query: 44 RMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPAGFPDHPHRGFETV 103
+ V V + +G GA VRR+IG +L+ LDPFL+ DEF P GFPDHPHRGFETV
Sbjct: 5 KKVTLSVLSREQSEGVGARVRRSIGGPELKMLDPFLLFDEFKGGRPGGFPDHPHRGFETV 64
Query: 104 TYMLQGG-ITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAGEGVQNGLQLWINLSSSD 162
+Y+L+GG + H+DF GH G ++ GD+QWMTAGRGI+H+EMP E +GLQLW+NL S+
Sbjct: 65 SYLLEGGSMAHEDFCGHVGKMNPGDLQWMTAGRGILHAEMPCSEEPAHGLQLWVNLKRSE 124
Query: 163 KMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQ 222
KM+EP+YQE+ SEEI + DGV V +I+GE++G++S VYTRTPT++LDF L A+ Q
Sbjct: 125 KMVEPQYQELKSEEIPKPSKDGVTVAVISGEALGIKSKVYTRTPTLYLDFKLDQGAKHSQ 184
Query: 223 SIPETWNAFVYTIEGEGVFGTVNS-SAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQ 281
IP+ W +F+YTI G+ G ++ + H VL GD + N+ K+ FVLIAG+
Sbjct: 185 PIPKGWTSFIYTISGDVYIGPDDAQQKIEPHRTAVLGEGDTVQLENKDPKRSHFVLIAGE 244
Query: 282 PLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAKYWRSQ 324
PL EPVVQ+GPFVMN+ EI + I D++ KNGFE AK W+S+
Sbjct: 245 PLREPVVQHGPFVMNTNEEISEAILDFRNAKNGFEGAKTWKSK 287
>sp|Q9HZ00|Y3240_PSEAE Putative quercetin 2,3-dioxygenase PA3240 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA3240 PE=3 SV=1
Length = 285
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/281 (39%), Positives = 157/281 (55%), Gaps = 13/281 (4%)
Query: 40 FSRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPP----AGFPDH 95
+R R V + G + DG G + R IG DPFLMLD+F P AGFP H
Sbjct: 1 MTRYRDVLELHTGHPASDGAGVRLTRVIGGPSPERFDPFLMLDQFDTQNPDDYVAGFPSH 60
Query: 96 PHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAG-EGVQNGLQL 154
PHRGFETVTYML+G + H+D G++G + G VQWMTA GI+HSEMP EG G QL
Sbjct: 61 PHRGFETVTYMLEGRMRHEDHLGNRGLLKPGGVQWMTAAHGIIHSEMPEQVEGAMRGFQL 120
Query: 155 WINLSSSDKMIEPRYQEIPSEEIKRAET-DGVEVRIIA-----GESMGVRSPVYTRTPTM 208
W+NL + +K+ Y++I E++ R ET GV+V +IA G++ + + T
Sbjct: 121 WVNLPAKNKLAPAGYRDIEPEDVPRLETAGGVKVTVIAGRFDDGQAQQIGAVERPDTEPH 180
Query: 209 FLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNR 268
+ D L +I +P+ +Y EG ++ + + LS LS R
Sbjct: 181 YYDLQLPAGGRIAPRLPDGHRVLLYVYEGSLTVEGERPVEIATNRLARLSEEGELSL--R 238
Query: 269 SSKQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQ 309
S R +++AG+PL+EP+VQYGPFVMNS+ EI+Q + DY+
Sbjct: 239 SEAGARVLVLAGKPLHEPIVQYGPFVMNSREEIEQALRDYR 279
>sp|P58112|Y481_CAUCR Pirin-like protein CC_0481 OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=CC_0481 PE=3 SV=1
Length = 276
Score = 174 bits (441), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/274 (38%), Positives = 151/274 (55%), Gaps = 13/274 (4%)
Query: 44 RMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPA----GFPDHPHRG 99
R V K V G+ + DG G + R +G + + DPFLMLD F + GFPDHPHRG
Sbjct: 4 RPVLKIVKGQPTSDGAGVRLTRMLGTPEAQMFDPFLMLDCFDNDQASDYLGGFPDHPHRG 63
Query: 100 FETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPA-GEGVQNGLQLWINL 158
FETVTYML+G + H+D +G +G I G +QWM AG+GIVHSEMP +G G QLW+NL
Sbjct: 64 FETVTYMLEGRMRHKDNTGREGVIGPGGIQWMRAGKGIVHSEMPEQDQGRMRGFQLWVNL 123
Query: 159 SSSDKMIEPRYQEIPSEEIK-RAETDGVEVRIIAGES-MGVRSPV-YTRTPTMFLDFTLK 215
+ KM P YQE ++ I A GV V++I+G + G P+ ++ D L
Sbjct: 124 PARLKMSAPGYQEFETDSIPVEARDGGVTVKVISGATETGTAGPIGGGAVDALYFDVALP 183
Query: 216 PRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRF 275
+ + + NA + EG+ V V A + + L GD + + R
Sbjct: 184 AGTVFEEPVGDDRNAMLAVYEGK---VRVAHDTVDALSGVFLGRGDTVRV--EAVTDARV 238
Query: 276 VLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQ 309
+L+AG+P+ EPV +GPFVM+++ + Q +D+Q
Sbjct: 239 LLLAGRPIGEPVFWHGPFVMDTREGLMQAFDDFQ 272
>sp|Q9KKY1|Y3769_VIBCH Putative quercetin 2,3-dioxygenase VC_A0969 OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=VC_A0969 PE=3 SV=1
Length = 282
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 153/280 (54%), Gaps = 17/280 (6%)
Query: 40 FSRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLDEFSVSPPA----GFPDH 95
++ R + + V + + DGDG ++R G + PFLMLDE A GFP H
Sbjct: 1 MTKDREIRQTVPAQPTSDGDGVKIQRIAGF-QRPNFSPFLMLDELKADSQADYIGGFPPH 59
Query: 96 PHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMP-AGEGVQNGLQL 154
PHRG ET+TYMLQG H+D G+ G + +G QWM AG G++HSEMP EG +G Q+
Sbjct: 60 PHRGIETLTYMLQGHFQHRDQMGNVGELRSGGAQWMAAGHGVIHSEMPIMQEGQLHGFQI 119
Query: 155 WINLSSSDKMIEPRYQEIPSEEI-KRAETDGVEVRIIAG----ESMGVRSPVY-TRTPTM 208
WIN + +KM +YQ+ E I +R +R+IAG E + P+ T P
Sbjct: 120 WINQPARNKMSPAKYQDFQPESIVERHHPQQGLLRVIAGSVEVEDQTITGPLTDTGVPAT 179
Query: 209 FLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNR 268
+D+ + I + P +NA +Y G V +V ++ +L+ G+ L+ R
Sbjct: 180 VVDWRAEAGQDISINTPPHFNAMLYVYRGS---LNVGKQSVKTGHMAMLTAGEQLTL--R 234
Query: 269 SSKQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDY 308
+ + +L+ GQP++EPVV YGPFVMNS AEI+Q I DY
Sbjct: 235 AEQPCGSLLLMGQPIDEPVVHYGPFVMNSMAEIEQAIRDY 274
>sp|Q9I163|Y2418_PSEAE Putative quercetin 2,3-dioxygenase PA2418 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA2418 PE=3 SV=1
Length = 286
Score = 155 bits (391), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 142/281 (50%), Gaps = 25/281 (8%)
Query: 58 GDGAVVRRAIGRGDL-RSLDPFLMLDEFSVS--PPA----GFPDHPHRGFETVTYMLQGG 110
GDG VR L + + PFL+LD + PPA G HPHRGFETVT + QG
Sbjct: 17 GDGFPVRSLFSYNTLGQHISPFLLLDYAGPADFPPAQQRRGVGQHPHRGFETVTIVYQGE 76
Query: 111 ITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAGE-----GVQNGLQLWINLSSSDKMI 165
+ H D +G G I GDVQWMTA GI+H E + G +QLW+NL SSDKM
Sbjct: 77 VEHHDSTGAGGRIGPGDVQWMTAASGILHEEYHSERFRSTGGTLEMVQLWVNLPSSDKMN 136
Query: 166 EPRYQEIPSEEIKRA--ETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQS 223
PRYQ + +I R E+R+IAG + P T +P D LK +
Sbjct: 137 PPRYQTLLDADIPRVGLPDRAGELRVIAGRYGRHQGPALTHSPLAVWDVQLKAGKHLALD 196
Query: 224 IPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPL 283
+P+ V + G G V V +L D ++ ++ ++++G+PL
Sbjct: 197 LPKGHTCAVVVLRGTLAVG---DEIVREAQVALLDRDDPRLELE-ANNDVQLLVLSGEPL 252
Query: 284 NEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFENAKYWRSQ 324
+EP++ YGPFVM+S+ EIDQ IED FEN ++ R+
Sbjct: 253 DEPIIGYGPFVMSSREEIDQAIED-------FENGRFIRAH 286
>sp|Q9HLU2|Y133_THEAC Putative quercetin 2,3-dioxygenase Ta0133 OS=Thermoplasma
acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 /
NBRC 15155 / AMRC-C165) GN=Ta0133 PE=3 SV=1
Length = 261
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 25/243 (10%)
Query: 91 GFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAG--EGV 148
GFP HPHRG ET+TY ++G H+D GH+G I G++QWMTAG GI H EMP G
Sbjct: 13 GFPWHPHRGIETITYQIKGKTFHEDSEGHRGIIAPGEIQWMTAGSGIFHEEMPKPIYYGE 72
Query: 149 QN----------GLQLWINLSSSDKMIEPRYQEIPSEEIKRAETD-GVEVRIIAGESMGV 197
+N G+QLW+N+ +S KM +P Y+ I S++I + D G +RI+AG V
Sbjct: 73 ENKYRERNDSNAGIQLWLNMPASSKMADPAYRSIRSDQIPQISDDYGNRIRIVAGTVNRV 132
Query: 198 --------RSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAV 249
+ + R +++ ++P + S+PE A + +EG VN S
Sbjct: 133 SGALNENFQYDLMQRIDPYYVEILMEPDTRTSLSVPEGHRAIMAIVEGS---IRVNGSTF 189
Query: 250 SAHNVLVLSLGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQ 309
+ NV VLS +G + S R + +AG+PLNEP+ YGP VMN++ ++ Q + Q
Sbjct: 190 NEKNVAVLS-KEGTDIFIDSQANSRLIFLAGKPLNEPIAWYGPIVMNTRDQLIQAFNELQ 248
Query: 310 LCK 312
K
Sbjct: 249 EGK 251
>sp|P58114|Y3178_CAUCR Pirin-like protein CC_3178 OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=CC_3178 PE=3 SV=1
Length = 288
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 127/257 (49%), Gaps = 29/257 (11%)
Query: 73 RSLDPFLMLDEFSVSPPA---GFPD------HPHRGFETVTYMLQGGITHQDFSGHKGTI 123
R + PF LD + P A GFP HPH G T+TY+ +G ITH+D G I
Sbjct: 28 RMVGPFTFLDH--MGPAAFQPGFPKSADVRPHPHIGLSTLTYLFEGEITHRDSVGSLAVI 85
Query: 124 HTGDVQWMTAGRGIVHSEMPAG----EGVQNGLQLWINLSSSDKMIEPRY--QEIPSEEI 177
+V WMTAG GI HSE G G +G+Q W+ L + + I+P + E P+ E+
Sbjct: 86 KPHEVNWMTAGSGITHSERFEGLREHGGRMDGMQAWVALPTEFEEIDPSFTHHEGPA-EL 144
Query: 178 KRAETDGVEVRIIAGESMGVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEG 237
E G++ R+IAGE+ G +S V +P ++ + L+P + ++P + I
Sbjct: 145 PYYENGGLKARLIAGEAFGAKSSVPVYSPLFYVHWELEP--GVTAALPAEYPERAAYIAA 202
Query: 238 EGVFGTVNSSAVSAHNVLVLSLGDGL--SAWNRSSKQLRFVLIAGQPLNEPVVQYGPFVM 295
V V+ + + V + G+ + A RS+ +L+ G+P+ +++ FV
Sbjct: 203 GRV--EVDGRELVEAQMAVFAPGETVVFKALERST----VMLLGGEPVGPRFIEWN-FVS 255
Query: 296 NSQAEIDQTIEDYQLCK 312
+S+ I+Q D++ +
Sbjct: 256 SSKDRIEQAKADWKAGR 272
>sp|Q9I4D3|Y1205_PSEAE Putative quercetin 2,3-dioxygenase PA1205 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA1205 PE=3 SV=1
Length = 315
Score = 88.2 bits (217), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 129/300 (43%), Gaps = 28/300 (9%)
Query: 23 SNNKIRNIMSASDESPCFSRPRMVAKKVHGKLSHDGDGAVVRRAIGRGDLRSLDPFLMLD 82
SN + R +S+S + P R + ++V + + G G V R + R + + LD
Sbjct: 2 SNTEERCDLSSSRDCP--ERHEHLLQRVTARAAEIGGGITVSRLMPSRQRRMIGAWCFLD 59
Query: 83 -----EFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGI 137
EF HPH G +T T+M+QG H+D G+ I G V MTAG GI
Sbjct: 60 HAGPAEFEPGGGLAVGPHPHIGLQTFTWMIQGEALHRDSLGNVQVIRPGQVNLMTAGHGI 119
Query: 138 VHSE--MPAGEGVQNGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESM 195
H+E +P E + QLWI L + I P + P ++ R + GV ++AG
Sbjct: 120 AHTEESLP-DERHAHAAQLWIALPYEQRDIAPAFDHHP--DLPRWQEQGVTFTLLAGALA 176
Query: 196 GVRSPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVL 255
G ++P +P + D + + ++ + + +EG G A N L
Sbjct: 177 GRQAPCRLYSPLLGADLACHDASTLQLTLDPHFEYGLLPLEG----GLEVGGEHFAVNEL 232
Query: 256 VLSLGDGLSAWNRSSKQL------RFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQ 309
LGDG R QL R +L+ G P + + FV +S+ EI + + ++
Sbjct: 233 AY-LGDG-----RDGLQLQLDPGARVLLLGGAPFGAEIFMWWNFVGHSKGEIARAQKAWE 286
>sp|Q9I4C8|Y1210_PSEAE Putative quercetin 2,3-dioxygenase PA1210 OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=PA1210 PE=3 SV=1
Length = 232
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
Query: 86 VSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAG 145
++ +GFP HPHR E +TY+ +G ITHQD G+KG GDVQ M+AG GIVHSE
Sbjct: 48 IAAGSGFPPHPHRDMEIITYVREGAITHQDSLGNKGRTEAGDVQVMSAGTGIVHSEYNLE 107
Query: 146 EGVQNGLQLWINLSSSDKMIEPRYQEIPSEEIKRAETDGVEVRIIAGESMGVRSPVYTRT 205
Q+WI + +PR+ P +AE DG V + +G+ + ++ R
Sbjct: 108 AETTRIFQIWI--IPDRRGDQPRWGSKP---FPKAERDGRFVTLASGDEQDSEA-LHIRA 161
Query: 206 PTMFLDFTLK 215
TLK
Sbjct: 162 DAEVAAVTLK 171
>sp|Q9XBR7|Y1337_ZYMMO Putative quercetin 2,3-dioxygenase ZMO1337 OS=Zymomonas mobilis
subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=ZMO1337 PE=3 SV=1
Length = 235
Score = 71.6 bits (174), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 44/71 (61%)
Query: 86 VSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAG 145
++P GF HPH+ E VTY+ +G +TH+D G+KG I GDVQ M+AG GIVHSE
Sbjct: 48 IAPDTGFGMHPHKDMEIVTYIREGALTHEDSLGNKGRIEAGDVQVMSAGTGIVHSEYNRE 107
Query: 146 EGVQNGLQLWI 156
Q+WI
Sbjct: 108 ASDTRLFQIWI 118
>sp|P65725|Y187_MYCBO Putative quercetin 2,3-dioxygenase Mb0187c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb0187c PE=3 SV=1
Length = 244
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 78 FLMLDEFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGI 137
L+ ++ + P +GF HPHR E VT++L+G + HQD +G+ G I+ G Q M+AG GI
Sbjct: 43 LLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGI 102
Query: 138 VHSEM--PAGEGVQNGLQLWINLSSSDKMIEPRYQEIPSEEIK 178
+HSEM A E V +Q+W+ ++ + QEI E ++
Sbjct: 103 LHSEMNDSATEPVHF-VQMWVIPDATGITASYQQQEIDDELLR 144
>sp|P65724|Y181_MYCTU Putative quercetin 2,3-dioxygenase Rv0181c/MT0190 OS=Mycobacterium
tuberculosis GN=Rv0181c PE=3 SV=1
Length = 244
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 78 FLMLDEFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGI 137
L+ ++ + P +GF HPHR E VT++L+G + HQD +G+ G I+ G Q M+AG GI
Sbjct: 43 LLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGI 102
Query: 138 VHSEM--PAGEGVQNGLQLWINLSSSDKMIEPRYQEIPSEEIK 178
+HSEM A E V +Q+W+ ++ + QEI E ++
Sbjct: 103 LHSEMNDSATEPVHF-VQMWVIPDATGITASYQQQEIDDELLR 144
>sp|Q9CKD7|Y1685_PASMU Putative quercetin 2,3-dioxygenase PM1685 OS=Pasteurella multocida
(strain Pm70) GN=PM1685 PE=3 SV=1
Length = 233
Score = 68.9 bits (167), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 80 MLDEFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVH 139
+++E ++P GF HPH+ E +TY+L G I HQD G+ +H G+ Q M+AG G+ H
Sbjct: 44 VINEDIIAPQHGFDMHPHQDMEILTYILSGTIEHQDSMGNHTQLHAGEFQIMSAGSGVHH 103
Query: 140 SEM-PAGEGVQNGLQLWINLSSSDKMIEPRYQE 171
+E+ P+ E + Q+WI S K I PRY++
Sbjct: 104 AEINPSSEHDVHLYQIWILPKS--KGIAPRYEQ 134
>sp|P58113|Y1473_CAUCR Pirin-like protein CC_1473 OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=CC_1473 PE=3 SV=1
Length = 232
Score = 67.8 bits (164), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 42/75 (56%)
Query: 86 VSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEMPAG 145
++P GFP HPH E +TY+ G ITHQD G+KG GDVQ M+AG GI H+E
Sbjct: 48 IAPNTGFPPHPHSDMEIITYVRDGAITHQDNLGNKGRTVAGDVQVMSAGSGIRHAEYNLE 107
Query: 146 EGVQNGLQLWINLSS 160
Q+WI S
Sbjct: 108 PETTRIFQIWIEPKS 122
>sp|P73623|Y1773_SYNY3 Putative quercetin 2,3-dioxygenase sll1773 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll1773 PE=3 SV=1
Length = 232
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 80 MLDEFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVH 139
+++E ++P GF H H+ E VTY+L+G + H+D G+ I GDVQ M+AG GI+H
Sbjct: 42 VINEDYIAPGQGFATHGHKDMEIVTYVLEGELEHKDSIGNGSIIRPGDVQRMSAGTGILH 101
Query: 140 SEM-PAGEGVQNGLQLWINLSSSDKMIEPRYQE 171
SE P+ + + LQ+WI + + +EP Y++
Sbjct: 102 SEFNPSPDQPVHLLQIWI--TPNQFGVEPSYEQ 132
>sp|P58116|YHHW_ECO57 Quercetin 2,3-dioxygenase OS=Escherichia coli O157:H7 GN=yhhW PE=3
SV=1
Length = 231
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 91 GFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEM-PAGEGVQ 149
GF HPH+ E +TY+L+G + HQD G+K + G+ Q M+AG GI HSE P+
Sbjct: 53 GFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERL 112
Query: 150 NGLQLWINLSSSDKMIEPRYQE 171
+ Q+WI + I PRY++
Sbjct: 113 HLYQIWI--MPEENGITPRYEQ 132
>sp|P46852|YHHW_ECOLI Quercetin 2,3-dioxygenase OS=Escherichia coli (strain K12) GN=yhhW
PE=1 SV=1
Length = 231
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 91 GFPDHPHRGFETVTYMLQGGITHQDFSGHKGTIHTGDVQWMTAGRGIVHSEM-PAGEGVQ 149
GF HPH+ E +TY+L+G + HQD G+K + G+ Q M+AG GI HSE P+
Sbjct: 53 GFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERL 112
Query: 150 NGLQLWINLSSSDKMIEPRYQE 171
+ Q+WI + I PRY++
Sbjct: 113 HLYQIWI--MPEENGITPRYEQ 132
>sp|Q7N622|SYN_PHOLL Asparagine--tRNA ligase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=asnS PE=3 SV=1
Length = 466
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 17/125 (13%)
Query: 199 SPVYTRTPTMFLDFTLKPRAQIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLS 258
S VYT PT + + + + E W +E E F +N +A A N+L
Sbjct: 224 SKVYTFGPTFRAE-----NSNTSRHLAEFW-----MLEPEIAFANLNDAATLAENMLKYV 273
Query: 259 LGDGLSAWNRSSKQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQT--IEDYQLCKNGFE 316
L+ + L+F A + + + + F+ + A+ID T IE Q C FE
Sbjct: 274 FKAALA---ERADDLQF--FAERVDKDVITRLEKFINSDFAQIDYTSAIEILQNCGQKFE 328
Query: 317 NAKYW 321
N +W
Sbjct: 329 NPVFW 333
>sp|Q8BWM0|PGES2_MOUSE Prostaglandin E synthase 2 OS=Mus musculus GN=Ptges2 PE=1 SV=3
Length = 384
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 13/71 (18%)
Query: 254 VLVLSLGDGLSAWNRSS---KQLRFVLIAGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQL 310
+LV GD L N SS L+ L++GQPL E + Y P +A DQ E +
Sbjct: 149 ILVAQEGDSLQQLNDSSVIISALKTYLVSGQPLEEVITYYPPM----KAMNDQGKEVTEF 204
Query: 311 CKNGFENAKYW 321
C KYW
Sbjct: 205 CN------KYW 209
>sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=iscS PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 219 QIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLI 278
+IH+ +P T V IEGE + +N S ++A S G ++ + + + +
Sbjct: 291 RIHR-VPNTTLVSVRGIEGEAMLWDLNRSNIAA------STGSACASEDLEANPVMVAIG 343
Query: 279 AGQPLNEPVVQYGPFVMNSQAEIDQTIEDY 308
A + L ++ N++AEID+TIE +
Sbjct: 344 ASKELAHTAIRLSLSRFNTEAEIDKTIEVF 373
>sp|B6JKF2|ISCS_HELP2 Cysteine desulfurase OS=Helicobacter pylori (strain P12) GN=iscS
PE=3 SV=1
Length = 387
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 219 QIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLI 278
+IH+ +P T V IEGE + +N S ++A S G ++ + + + +
Sbjct: 291 RIHR-VPNTTLVSVRGIEGEAMLWDLNRSNIAA------STGSACASEDLEANPVMVAIG 343
Query: 279 AGQPLNEPVVQYGPFVMNSQAEIDQTIEDY 308
A + L ++ N++AEID+TIE +
Sbjct: 344 ASKELAHTAIRLSLSRFNTEAEIDKTIEVF 373
>sp|B2US50|ISCS_HELPS Cysteine desulfurase OS=Helicobacter pylori (strain Shi470) GN=iscS
PE=3 SV=1
Length = 387
Score = 33.1 bits (74), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 219 QIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLI 278
+IH+ +P T V IEGE + +N S ++A S G ++ + + + +
Sbjct: 291 RIHR-VPNTTLISVRGIEGEAMLWDLNRSNIAA------STGSACASEDLEANPVMVAIG 343
Query: 279 AGQPLNEPVVQYGPFVMNSQAEIDQTIEDYQLCKNGFEN 317
A + L ++ N++AEID+TIE + N
Sbjct: 344 ASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAATRLRN 382
>sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori (strain J99) GN=iscS
PE=3 SV=1
Length = 387
Score = 32.3 bits (72), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 219 QIHQSIPETWNAFVYTIEGEGVFGTVNSSAVSAHNVLVLSLGDGLSAWNRSSKQLRFVLI 278
++H+ +P T V IEGE + +N S ++A S G ++ + + + +
Sbjct: 291 RVHR-VPNTTLISVRGIEGEAMLWDLNRSNIAA------STGSACASEDLEANPVMVAIG 343
Query: 279 AGQPLNEPVVQYGPFVMNSQAEIDQTIEDY 308
A + L ++ N++AEID+TIE +
Sbjct: 344 ASKELAHTAIRLSLSRFNTEAEIDKTIEVF 373
>sp|A1WUJ7|MTNA_HALHL Methylthioribose-1-phosphate isomerase OS=Halorhodospira halophila
(strain DSM 244 / SL1) GN=mtnA PE=3 SV=1
Length = 354
Score = 32.0 bits (71), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 13/113 (11%)
Query: 123 IHTGDVQWMTAGRGIVHSEMPAGEGV----------QNGLQLWINL-SSSDKMIEPRYQE 171
+ TG VQW G + + + Q+G++L + +S+ + P ++
Sbjct: 228 MRTGQVQWAIVGADRIAANGDVANKIGTYAVALAARQHGVRLMVVAPTSTIDLATPAGEQ 287
Query: 172 IPSEEIKRAETDGVEVRIIAGES--MGVRSPVYTRTPTMFLDFTLKPRAQIHQ 222
IP E E R IA ES +G +PV+ TP +D + R +HQ
Sbjct: 288 IPIETRDAREVLYAGGRRIAPESEAVGAWNPVFDVTPAELVDVIVTERGVVHQ 340
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 127,987,523
Number of Sequences: 539616
Number of extensions: 5666407
Number of successful extensions: 11460
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 11395
Number of HSP's gapped (non-prelim): 31
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)