Query 020449
Match_columns 326
No_of_seqs 189 out of 1472
Neff 6.4
Searched_HMMs 46136
Date Fri Mar 29 02:27:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020449.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020449hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 3E-109 8E-114 788.3 26.0 314 8-326 5-324 (324)
2 cd00693 secretory_peroxidase H 100.0 9E-102 2E-106 735.5 25.1 297 26-325 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 7.8E-73 1.7E-77 520.5 8.7 229 43-290 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 1.7E-70 3.7E-75 516.1 19.8 232 41-323 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 1.9E-67 4.2E-72 490.0 18.1 229 38-311 11-251 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 4E-66 8.7E-71 479.7 19.1 232 29-311 3-248 (250)
7 PLN02879 L-ascorbate peroxidas 100.0 2.4E-64 5.2E-69 467.1 19.7 220 41-311 18-248 (251)
8 cd00692 ligninase Ligninase an 100.0 2.6E-64 5.6E-69 482.0 20.5 236 39-326 16-287 (328)
9 cd00314 plant_peroxidase_like 100.0 6.8E-60 1.5E-64 440.4 15.6 224 42-307 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 4.5E-58 9.8E-63 445.6 18.6 274 26-316 28-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 3.4E-55 7.3E-60 449.6 20.2 271 26-313 38-405 (716)
12 PRK15061 catalase/hydroperoxid 100.0 6.4E-52 1.4E-56 423.3 20.0 274 26-316 40-414 (726)
13 cd08201 plant_peroxidase_like_ 100.0 4.2E-50 9.1E-55 371.9 11.7 214 48-307 32-264 (264)
14 cd08200 catalase_peroxidase_2 100.0 6.4E-40 1.4E-44 307.4 16.0 221 45-309 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.2E-34 2.5E-39 298.3 16.0 220 42-309 429-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 6.7E-34 1.4E-38 291.3 17.0 220 45-309 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.1E-32 2.3E-37 271.1 15.9 256 41-309 70-416 (730)
18 COG0376 KatG Catalase (peroxid 99.4 1.3E-12 2.8E-17 130.0 11.9 216 45-309 452-725 (730)
19 PTZ00411 transaldolase-like pr 56.1 43 0.00094 32.9 7.3 48 137-184 180-230 (333)
20 PF11895 DUF3415: Domain of un 47.3 16 0.00035 28.5 2.2 19 293-311 2-20 (80)
21 COG3763 Uncharacterized protei 40.1 62 0.0014 24.6 4.4 29 41-69 23-51 (71)
22 PHA03163 hypothetical protein; 30.8 50 0.0011 26.2 2.7 37 1-37 1-46 (92)
23 PRK12346 transaldolase A; Prov 22.6 51 0.0011 32.2 1.7 65 120-185 150-220 (316)
24 PLN00017 photosystem I reactio 22.1 50 0.0011 26.0 1.2 21 287-307 38-58 (90)
25 PLN02161 beta-amylase 21.6 1.5E+02 0.0033 30.9 4.9 34 283-320 234-272 (531)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=3.5e-109 Score=788.28 Aligned_cols=314 Identities=44% Similarity=0.754 Sum_probs=291.6
Q ss_pred HHHHHHHHHHHHhhc-cCCCCCccccccCCccHHHHHHHHHHHHHhhCCCccchhhHhhhccccccCCCCceeccCCCCC
Q 020449 8 EMMVFLFTILLIMQR-GDGQLVENFYSSTCPNVESIVNRVVSTKFSQTFITVPATLRLFFHDCFIVGCDASVLIQSPNGD 86 (326)
Q Consensus 8 ~~~~~~~~~~~~~~~-~~~~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~~~ 86 (326)
++.+|+++++...+. ++++|+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||+++ .
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~--~ 82 (324)
T PLN03030 5 IVILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS--N 82 (324)
T ss_pred hhHHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC--c
Confidence 344455444444443 3567999999999999999999999999999999999999999999999999999999965 4
Q ss_pred cccCCcCCCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCC
Q 020449 87 AEKDAPDNLSLAGDGFDTVVQAKQAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEP 166 (326)
Q Consensus 87 ~E~~~~~N~~l~~~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p 166 (326)
.||++++|.+| +||++|+.||++||+.||++||||||||+||||||+++|||.|+|++||||+++|.+.++. +||+|
T Consensus 83 ~Ek~a~~N~~l--~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p 159 (324)
T PLN03030 83 TEKTALPNLLL--RGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGF 159 (324)
T ss_pred ccccCCCCcCc--chHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCC
Confidence 79999999999 9999999999999999999999999999999999999999999999999999999877775 89999
Q ss_pred CCCHHHHHHHHHhCCCCcccceeeccccccccccccccccccccCCCCC-CCCCCCCHHHHHHHhhcCCCCCCCCccccC
Q 020449 167 TFNLDELNQMFAKHGLSQIDMIALSGAHTLGFSHCDRFANRIYSFSSSS-PVDPSLDPAYAQQLMQSCPRNVDPQIAINM 245 (326)
Q Consensus 167 ~~~~~~l~~~F~~~Gls~~elVaLsGaHTiG~~hc~~f~~Rl~~f~g~~-~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~l 245 (326)
+.+++++++.|+++||+.+|||+||||||||++||.+|.+|||||+|++ .+||+||+.|+..||+.||..+++...+++
T Consensus 160 ~~~~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~l 239 (324)
T PLN03030 160 TDSIDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIAL 239 (324)
T ss_pred CCCHHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccC
Confidence 9999999999999999999999999999999999999999999999875 589999999999999999964333446889
Q ss_pred CCCCCCccChHHHHHHhhCccccccccccccCCCChHHHHhhccCh----hHHHHHHHHHHHHhhcCCCCCCCCCccccc
Q 020449 246 DPVTPRTFDNMYYQNLVAGKGLFTSDQVLFTDASSQPTVNDFARNP----LDFNAAFATAMRKLGRVGVKTGNQGEIRRD 321 (326)
Q Consensus 246 D~~tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~~~V~~yA~~~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~ 321 (326)
|+.||.+|||+||+||++++|+|+|||+|++|++|+++|++||.|+ +.|+++|++||+|||+|+|+||.+|||||+
T Consensus 240 D~~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~ 319 (324)
T PLN03030 240 DTGSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKV 319 (324)
T ss_pred CCCCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceecc
Confidence 9999999999999999999999999999999999999999999875 599999999999999999999999999999
Q ss_pred CccCC
Q 020449 322 CTAFN 326 (326)
Q Consensus 322 C~~~n 326 (326)
|+++|
T Consensus 320 C~~vN 324 (324)
T PLN03030 320 CSAIN 324 (324)
T ss_pred ccccC
Confidence 99998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=9e-102 Score=735.48 Aligned_cols=297 Identities=55% Similarity=0.927 Sum_probs=287.2
Q ss_pred CCCccccccCCccHHHHHHHHHHHHHhhCCCccchhhHhhhccccccCCCCceeccCCC-CCcccCCcCCCCCCcchhHH
Q 020449 26 QLVENFYSSTCPNVESIVNRVVSTKFSQTFITVPATLRLFFHDCFIVGCDASVLIQSPN-GDAEKDAPDNLSLAGDGFDT 104 (326)
Q Consensus 26 ~l~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~~~-~~~E~~~~~N~~l~~~g~~~ 104 (326)
||+++||++|||++|+||++.|++.+.++++++|++|||+||||||+||||||||+++. +.+|+++++|.+| +||++
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l--~g~~~ 78 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSL--RGFDV 78 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCc--chhHH
Confidence 59999999999999999999999999999999999999999999999999999999876 6789999999999 99999
Q ss_pred HHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCCCc
Q 020449 105 VVQAKQAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQ 184 (326)
Q Consensus 105 I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~ 184 (326)
|+.||+++|+.||++|||||||+||||+||+++|||.|+|++||+|+.++.+..+ ++||+|+.+++++++.|+++||++
T Consensus 79 i~~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~ 157 (298)
T cd00693 79 IDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTV 157 (298)
T ss_pred HHHHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999999999999999999999999998877655 789999999999999999999999
Q ss_pred ccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhC
Q 020449 185 IDMIALSGAHTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAG 264 (326)
Q Consensus 185 ~elVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~ 264 (326)
+|||||+||||||++||.+|.+|||||+|++.+||+||+.|+..|++.||..+++...+++|+.||.+|||+||++|+.+
T Consensus 158 ~d~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~ 237 (298)
T cd00693 158 TDLVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237 (298)
T ss_pred HHheeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999765556778999999999999999999999
Q ss_pred ccccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCCCCCCCCCcccccCccC
Q 020449 265 KGLFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVKTGNQGEIRRDCTAF 325 (326)
Q Consensus 265 ~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~ 325 (326)
+|+|+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+|||||+|++|
T Consensus 238 ~glL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg~~GeiR~~C~~~ 298 (298)
T cd00693 238 RGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCRVV 298 (298)
T ss_pred ccCccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccCCCCccCCccccC
Confidence 9999999999999999999999999999999999999999999999999999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=7.8e-73 Score=520.48 Aligned_cols=229 Identities=52% Similarity=0.915 Sum_probs=210.0
Q ss_pred HHHHHHHHHhhCCCccchhhHhhhccccc-cCCCCceeccCCCCCcccCCcCCCCCCcchhHHHHHHHHHHHhhCCCCCc
Q 020449 43 VNRVVSTKFSQTFITVPATLRLFFHDCFI-VGCDASVLIQSPNGDAEKDAPDNLSLAGDGFDTVVQAKQAVEAQCPGVVS 121 (326)
Q Consensus 43 V~~~v~~~~~~~~~~a~~llRL~FHDc~v-~GcDgSill~~~~~~~E~~~~~N~~l~~~g~~~I~~iK~~le~~cp~~VS 121 (326)
||++|++++.++++++|++|||+|||||+ +|||||||+. .+|+++++|.+| .+++++|+.||+++|++||++||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~----~~e~~~~~N~gl-~~~~~~i~~ik~~~~~~cp~~VS 75 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLF----SAEKDAPPNRGL-RDGFDVIDPIKAKLEAACPGVVS 75 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGS----TTGGGSGGGTTH-HHHHHHHHHHHHHHCHHSTTTS-
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceecc----ccccccccccCc-ceeeechhhHHhhhcccccCCCC
Confidence 89999999999999999999999999999 9999999993 479999999999 24999999999999999999999
Q ss_pred HHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCCCcccceeeccccccccccc
Q 020449 122 CADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALSGAHTLGFSHC 201 (326)
Q Consensus 122 cADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGaHTiG~~hc 201 (326)
|||||++|||+||+.+|||.|+|++||+|++++...++ .+||.|+.+++++++.|+++|||++|||||+||||||++||
T Consensus 76 ~ADiialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c 154 (230)
T PF00141_consen 76 CADIIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHC 154 (230)
T ss_dssp HHHHHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESG
T ss_pred HHHHHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceeccccccccee
Confidence 99999999999999999999999999999999998766 68999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhCccccccccccccCCCCh
Q 020449 202 DRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAGKGLFTSDQVLFTDASSQ 281 (326)
Q Consensus 202 ~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~glL~SD~~L~~d~~t~ 281 (326)
.+|. ||| + .+||+||+.|+.. .| ..++++ .+++| ||.+|||+||+++++++|+|+|||+|++|++|+
T Consensus 155 ~~f~-rl~-~----~~dp~~d~~~~~~---~C-~~~~~~-~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~ 221 (230)
T PF00141_consen 155 SSFS-RLY-F----PPDPTMDPGYAGQ---NC-NSGGDN-GVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETR 221 (230)
T ss_dssp GCTG-GTS-C----SSGTTSTHHHHHH---SS-STSGCT-CEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHH
T ss_pred cccc-ccc-c----cccccccccccee---cc-CCCccc-ccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHH
Confidence 9999 999 5 5799999999988 99 433333 78899 999999999999999999999999999999999
Q ss_pred HHHHhhccC
Q 020449 282 PTVNDFARN 290 (326)
Q Consensus 282 ~~V~~yA~~ 290 (326)
++|++||+|
T Consensus 222 ~~V~~yA~d 230 (230)
T PF00141_consen 222 PIVERYAQD 230 (230)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhcC
Confidence 999999976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=1.7e-70 Score=516.10 Aligned_cols=232 Identities=28% Similarity=0.427 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHhhCCCccchhhHhhhcccc-------ccCCCCceeccCCCCCcccCCcCCCCCCcchhHHHHHHHHHHH
Q 020449 41 SIVNRVVSTKFSQTFITVPATLRLFFHDCF-------IVGCDASVLIQSPNGDAEKDAPDNLSLAGDGFDTVVQAKQAVE 113 (326)
Q Consensus 41 ~iV~~~v~~~~~~~~~~a~~llRL~FHDc~-------v~GcDgSill~~~~~~~E~~~~~N~~l~~~g~~~I~~iK~~le 113 (326)
+.++++|. .+.++|.++|.+|||+||||| ++||||||+++ +|+++++|.+| ++|+++|+.||+++
T Consensus 15 ~~~~~~~~-~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~-----~E~~~~~N~gL-~~g~~vid~iK~~~- 86 (289)
T PLN02608 15 EKARRDLR-ALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE-----EEYSHGANNGL-KIAIDLCEPVKAKH- 86 (289)
T ss_pred HHHHHHHH-HHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc-----cccCCccccch-HHHHHHHHHHHHHc-
Confidence 45667774 467889999999999999999 89999999984 59999999999 46999999999987
Q ss_pred hhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCCCcccceeeccc
Q 020449 114 AQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALSGA 193 (326)
Q Consensus 114 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGa 193 (326)
| +|||||||+||||+||+.+|||.|+|++||+|++++. ++++||+|+.+++++++.|+++||+++|||||+||
T Consensus 87 ---~-~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~---~~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGA 159 (289)
T PLN02608 87 ---P-KITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACP---EEGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGG 159 (289)
T ss_pred ---C-CcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCC---ccCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence 4 7999999999999999999999999999999999886 45689999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhC--ccc--cc
Q 020449 194 HTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAG--KGL--FT 269 (326)
Q Consensus 194 HTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~--~gl--L~ 269 (326)
||||++||. |+ +|.|. +..||.+|||+||++++.+ +|+ |+
T Consensus 160 HTiG~ahc~----r~-g~~g~-------------------------------~~~Tp~~FDN~Yy~~ll~~~~~gll~L~ 203 (289)
T PLN02608 160 HTLGRAHPE----RS-GFDGP-------------------------------WTKEPLKFDNSYFVELLKGESEGLLKLP 203 (289)
T ss_pred ccccccccc----CC-CCCCC-------------------------------CCCCCCccChHHHHHHHcCCcCCccccc
Confidence 999999995 54 44321 1268999999999999999 788 79
Q ss_pred cccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCCCCCCCCCcccccCc
Q 020449 270 SDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVKTGNQGEIRRDCT 323 (326)
Q Consensus 270 SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~ 323 (326)
|||+|+.|++|+++|+.||.|++.|+++|++||+||++|+|+||.+||+.+.-+
T Consensus 204 SD~~L~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg~~Ge~~~~~~ 257 (289)
T PLN02608 204 TDKALLEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPPSSAFKKKSTS 257 (289)
T ss_pred cCHhhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCcccccCc
Confidence 999999999999999999999999999999999999999999999999987643
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=1.9e-67 Score=490.01 Aligned_cols=229 Identities=25% Similarity=0.373 Sum_probs=208.7
Q ss_pred cHHHHHHHHHHHHHhhCCCccchhhHhhhccccccCCCCceeccC---CC-CCcccCCcCCCCCCcchhHHHHHHHHHHH
Q 020449 38 NVESIVNRVVSTKFSQTFITVPATLRLFFHDCFIVGCDASVLIQS---PN-GDAEKDAPDNLSLAGDGFDTVVQAKQAVE 113 (326)
Q Consensus 38 ~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~GcDgSill~~---~~-~~~E~~~~~N~~l~~~g~~~I~~iK~~le 113 (326)
..++||+++|++.+. +++++|++|||+|||||+ ||+|+++++ +. +.+|+++++|.+| ++++++|+.||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L-~~~~~~i~~iK~~~- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGL-DIARKLLEPIKKKY- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccch-HHHHHHHHHHHHHc-
Confidence 457899999999999 999999999999999994 777777743 22 3579999999999 68999999999976
Q ss_pred hhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCCCcccceeeccc
Q 020449 114 AQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALSGA 193 (326)
Q Consensus 114 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGa 193 (326)
| +|||||||+||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++|||++|||||+||
T Consensus 86 ---~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGa 161 (253)
T cd00691 86 ---P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGA 161 (253)
T ss_pred ---C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhccc
Confidence 5 799999999999999999999999999999999999877788899999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhCcc-------
Q 020449 194 HTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAGKG------- 266 (326)
Q Consensus 194 HTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~g------- 266 (326)
||||++||.. ++|.|. |..||.+|||+||++|+.++|
T Consensus 162 HTiG~a~c~~-----~~~~g~-------------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~ 205 (253)
T cd00691 162 HTLGRCHKER-----SGYDGP-------------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGL 205 (253)
T ss_pred ceeecccccC-----CCCCCC-------------------------------CCCCCCcccHHHHHHHhcCCCccCcCcc
Confidence 9999999953 244321 115899999999999999999
Q ss_pred -ccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCCCC
Q 020449 267 -LFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVK 311 (326)
Q Consensus 267 -lL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 311 (326)
+|+|||+|+.|++|+++|+.||.|++.|+++|++||+||++|||.
T Consensus 206 ~~L~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~ 251 (253)
T cd00691 206 LMLPTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVP 251 (253)
T ss_pred eechhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999999986
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=4e-66 Score=479.67 Aligned_cols=232 Identities=31% Similarity=0.463 Sum_probs=208.5
Q ss_pred ccccccC--CccHHHHHHHHHHHHHhhCCCccchhhHhhhc-----ccccc--CCCCceeccCCCCCcccCCcCCCCCCc
Q 020449 29 ENFYSST--CPNVESIVNRVVSTKFSQTFITVPATLRLFFH-----DCFIV--GCDASVLIQSPNGDAEKDAPDNLSLAG 99 (326)
Q Consensus 29 ~~fY~~s--CP~~e~iV~~~v~~~~~~~~~~a~~llRL~FH-----Dc~v~--GcDgSill~~~~~~~E~~~~~N~~l~~ 99 (326)
.+||... |+.+++.+++.+++.+ .+++++|.+|||+|| ||+++ ||||||.+ .+|+++++|.+| .
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~-----~~E~~~~~N~gl-~ 75 (250)
T PLN02364 3 KNYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRF-----DAEQAHGANSGI-H 75 (250)
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCccccc-----cccccCCCccCH-H
Confidence 3566644 8889999999999988 778999999999999 88876 99999965 369999999998 5
Q ss_pred chhHHHHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHh
Q 020449 100 DGFDTVVQAKQAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAK 179 (326)
Q Consensus 100 ~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~ 179 (326)
++|++|+.||+++ ++|||||||+||||+||+++|||.|+|++||+|++++.+ +++||.|+.++++|++.|++
T Consensus 76 ~~~~~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~ 147 (250)
T PLN02364 76 IALRLLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAK 147 (250)
T ss_pred HHHHHHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHH
Confidence 7999999999987 489999999999999999999999999999999999863 56899999999999999996
Q ss_pred -CCCCcccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHH
Q 020449 180 -HGLSQIDMIALSGAHTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYY 258 (326)
Q Consensus 180 -~Gls~~elVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy 258 (326)
+|||++|||||+||||||++|| .|+ +|.|.+ ..||.+|||+||
T Consensus 148 ~~Gl~~~d~VaLsGaHTiG~~hc----~r~-~~~g~~-------------------------------~~tp~~fDn~Yy 191 (250)
T PLN02364 148 QMGLSDKDIVALSGAHTLGRCHK----DRS-GFEGAW-------------------------------TSNPLIFDNSYF 191 (250)
T ss_pred hcCCCHHHheeeecceeeccccC----CCC-CCCCCC-------------------------------CCCCCccchHHH
Confidence 6999999999999999999999 454 443211 168999999999
Q ss_pred HHHhhC--ccccc--cccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCCCC
Q 020449 259 QNLVAG--KGLFT--SDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVK 311 (326)
Q Consensus 259 ~~l~~~--~glL~--SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 311 (326)
++|+.+ +|+|. |||+|+.|++|+.+|+.||.|++.|+++|++||+||++||+-
T Consensus 192 ~~ll~~~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 192 KELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred HHHhcCCcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999 89865 999999999999999999999999999999999999999973
No 7
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=2.4e-64 Score=467.13 Aligned_cols=220 Identities=28% Similarity=0.420 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHhhCCCccchhhHhhhccccc-------cCCCCceeccCCCCCcccCCcCCCCCCcchhHHHHHHHHHHH
Q 020449 41 SIVNRVVSTKFSQTFITVPATLRLFFHDCFI-------VGCDASVLIQSPNGDAEKDAPDNLSLAGDGFDTVVQAKQAVE 113 (326)
Q Consensus 41 ~iV~~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDgSill~~~~~~~E~~~~~N~~l~~~g~~~I~~iK~~le 113 (326)
+-+++.+.+.+ ++...+|.+|||+||||.+ +||||||.+. .|+++++|.|| +.++++|+.||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~-----~E~~~~~N~gL-~~~~~~i~~iK~~~- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP-----QELAHDANNGL-DIAVRLLDPIKELF- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh-----hhccCCCcCCh-HHHHHHHHHHHHHc-
Confidence 34577777776 4579999999999999964 7999999873 59999999999 34999999999987
Q ss_pred hhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCCCcccceeeccc
Q 020449 114 AQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALSGA 193 (326)
Q Consensus 114 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsGa 193 (326)
++|||||||+||||+||+.+|||.|+|++||+|+.++. ++++||+|+.+++++++.|+++||+++|||||+||
T Consensus 90 ----~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~---~~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGa 162 (251)
T PLN02879 90 ----PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPP---PEGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGG 162 (251)
T ss_pred ----CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeecc
Confidence 47999999999999999999999999999999999875 46789999999999999999999999999999999
Q ss_pred cccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhC--ccc--cc
Q 020449 194 HTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAG--KGL--FT 269 (326)
Q Consensus 194 HTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~--~gl--L~ 269 (326)
||||++||. | ++|.|.| | .||.+|||+||++|+.+ +|+ |+
T Consensus 163 HTiG~ah~~----r-~g~~g~~------------------------------d-~tp~~FDN~Yy~~ll~~~~~gll~L~ 206 (251)
T PLN02879 163 HTLGRCHKE----R-SGFEGAW------------------------------T-PNPLIFDNSYFKEILSGEKEGLLQLP 206 (251)
T ss_pred ccccccccc----c-ccCCCCC------------------------------C-CCccceeHHHHHHHHcCCcCCCccch
Confidence 999999995 4 4543321 2 58999999999999999 898 67
Q ss_pred cccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCCCC
Q 020449 270 SDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVK 311 (326)
Q Consensus 270 SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~ 311 (326)
||++|+.|++|+++|++||.||+.|+++|++||+||++||+.
T Consensus 207 SD~aL~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~ 248 (251)
T PLN02879 207 TDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFA 248 (251)
T ss_pred hhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999999999999999999974
No 8
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.6e-64 Score=481.96 Aligned_cols=236 Identities=28% Similarity=0.376 Sum_probs=211.9
Q ss_pred HHHHHHHHHHHHHhhCCC---ccchhhHhhhccccc------------cCCCCceeccCCCCCcccCCcCCCCCCcchhH
Q 020449 39 VESIVNRVVSTKFSQTFI---TVPATLRLFFHDCFI------------VGCDASVLIQSPNGDAEKDAPDNLSLAGDGFD 103 (326)
Q Consensus 39 ~e~iV~~~v~~~~~~~~~---~a~~llRL~FHDc~v------------~GcDgSill~~~~~~~E~~~~~N~~l~~~g~~ 103 (326)
+|..|+++|++.+..+.. .|+.+|||+||||++ +|||||||++++ .|+++++|.|| + +
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~---~E~~~~~N~gL--~--~ 88 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD---IETAFHANIGL--D--E 88 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc---ccccCCCCCCH--H--H
Confidence 588999999999986544 567799999999996 799999999753 69999999999 4 9
Q ss_pred HHHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHh-cCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCC
Q 020449 104 TVVQAKQAVEAQCPGVVSCADILAIAARDVVVL-AGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGL 182 (326)
Q Consensus 104 ~I~~iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl 182 (326)
+|+.||..+|+.| |||||||+||||+||+. .|||.|+|++||+|++++. ++++||.|+.++++|++.|+++||
T Consensus 89 vvd~lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~---~~g~LP~p~~sv~~l~~~F~~~Gf 162 (328)
T cd00692 89 IVEALRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPA---PDGLVPEPFDSVDKILARFADAGF 162 (328)
T ss_pred HHHHHHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCC---cccCCCCCCCCHHHHHHHHHHcCC
Confidence 9999999999998 99999999999999995 6999999999999999886 456899999999999999999999
Q ss_pred CcccceeeccccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHh
Q 020449 183 SQIDMIALSGAHTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLV 262 (326)
Q Consensus 183 s~~elVaLsGaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~ 262 (326)
+++|||||+||||||++|. +||+++ .+++| .||.+|||+||++++
T Consensus 163 ~~~E~VaLsGAHTiG~a~~---------------~Dps~~-------------------g~p~D-~TP~~FDn~Yf~~ll 207 (328)
T cd00692 163 SPDELVALLAAHSVAAQDF---------------VDPSIA-------------------GTPFD-STPGVFDTQFFIETL 207 (328)
T ss_pred CHHHHhhhcccccccccCC---------------CCCCCC-------------------CCCCC-CCcchhcHHHHHHHH
Confidence 9999999999999999982 367764 13578 599999999999987
Q ss_pred -hCcc-------------------ccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCCCCCCCCCcccccC
Q 020449 263 -AGKG-------------------LFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVGVKTGNQGEIRRDC 322 (326)
Q Consensus 263 -~~~g-------------------lL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C 322 (326)
.+++ +|+||++|+.|++|+.+|++||+||++|+++|++||+||++|||. ...+.+|
T Consensus 208 ~~~~~~~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~----~~~l~dc 283 (328)
T cd00692 208 LKGTAFPGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQD----NISLTDC 283 (328)
T ss_pred HcCCCCCCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCC----cchhccC
Confidence 5555 499999999999999999999999999999999999999999986 3377899
Q ss_pred ccCC
Q 020449 323 TAFN 326 (326)
Q Consensus 323 ~~~n 326 (326)
+.|+
T Consensus 284 s~v~ 287 (328)
T cd00692 284 SDVI 287 (328)
T ss_pred cccC
Confidence 9875
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=6.8e-60 Score=440.36 Aligned_cols=224 Identities=32% Similarity=0.456 Sum_probs=207.1
Q ss_pred HHHHHHHHHHhhCCCccchhhHhhhcccccc--------CCCCceeccCCCCCcccCCcCCCCCCcchhHHHHHHHHHHH
Q 020449 42 IVNRVVSTKFSQTFITVPATLRLFFHDCFIV--------GCDASVLIQSPNGDAEKDAPDNLSLAGDGFDTVVQAKQAVE 113 (326)
Q Consensus 42 iV~~~v~~~~~~~~~~a~~llRL~FHDc~v~--------GcDgSill~~~~~~~E~~~~~N~~l~~~g~~~I~~iK~~le 113 (326)
.|++.|++.+.+++.+++++|||+||||+++ ||||||+++ +|+++++|.+| .+++++|+.||+++|
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~-----~e~~~~~N~~l-~~~~~~l~~ik~~~~ 75 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFE-----PELDRPENGGL-DKALRALEPIKSAYD 75 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEecc-----ccccCcccccH-HHHHHHHHHHHHHcC
Confidence 5888999999999999999999999999996 999999996 49999999986 589999999999998
Q ss_pred hhCCCCCcHHHHHHHhhHhHHHhc--CCCCcccccCCCCCCCcc--cccCcCCCCCCCCCHHHHHHHHHhCCCCccccee
Q 020449 114 AQCPGVVSCADILAIAARDVVVLA--GGAPFSVELGRRDGLVSR--ASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIA 189 (326)
Q Consensus 114 ~~cp~~VScADilalAar~av~~~--GGP~~~v~~GR~D~~~s~--~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVa 189 (326)
. |++|||||||++||++||+.+ |||.|+|++||+|++++. ...+..++|.|..+++++++.|+++||+++||||
T Consensus 76 ~--~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VA 153 (255)
T cd00314 76 G--GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVA 153 (255)
T ss_pred C--CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHh
Confidence 8 899999999999999999999 999999999999999764 3345677888999999999999999999999999
Q ss_pred ec-ccccc-ccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhCc--
Q 020449 190 LS-GAHTL-GFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAGK-- 265 (326)
Q Consensus 190 Ls-GaHTi-G~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~-- 265 (326)
|+ ||||| |++||..|..|+ | .+|+.||.+|||+||++++.++
T Consensus 154 L~~GaHti~G~~~~~~~~~~~------------------------~----------~~~~~tp~~fDN~yy~~l~~~~~~ 199 (255)
T cd00314 154 LSAGAHTLGGKNHGDLLNYEG------------------------S----------GLWTSTPFTFDNAYFKNLLDMNWE 199 (255)
T ss_pred hccCCeeccCcccCCCCCccc------------------------C----------CCCCCCCCccchHHHHHHhcCCcc
Confidence 99 99999 999998777664 1 1355799999999999999988
Q ss_pred --------------cccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhc
Q 020449 266 --------------GLFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGR 307 (326)
Q Consensus 266 --------------glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~ 307 (326)
++|+||++|+.|++|+.+|+.||.|++.|+++|++||+||++
T Consensus 200 ~~~~~~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 200 WRVGSPDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred cccCCccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999974
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=4.5e-58 Score=445.59 Aligned_cols=274 Identities=24% Similarity=0.330 Sum_probs=237.2
Q ss_pred CCCccc-cccCCccH-HHHHHHHHHHHHhhC--------CCccchhhHhhhccccc-------cCCC-CceeccCCCCCc
Q 020449 26 QLVENF-YSSTCPNV-ESIVNRVVSTKFSQT--------FITVPATLRLFFHDCFI-------VGCD-ASVLIQSPNGDA 87 (326)
Q Consensus 26 ~l~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~GcD-gSill~~~~~~~ 87 (326)
.+..+| |.+.+-.. .+.|+++|++.+... ...+|.+|||+|||+.+ +|++ |+|.++ +
T Consensus 28 p~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~-----p 102 (409)
T cd00649 28 PMGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA-----P 102 (409)
T ss_pred CCCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc-----c
Confidence 355555 44444433 268999999999864 47999999999999986 6886 788884 6
Q ss_pred ccCCcCCCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccc----------
Q 020449 88 EKDAPDNLSLAGDGFDTVVQAKQAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRAS---------- 157 (326)
Q Consensus 88 E~~~~~N~~l~~~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~---------- 157 (326)
|++++.|.+| +++..+++.||+++ |..||+||+|+||+..||+.+|||.|+|.+||.|...+...
T Consensus 103 e~~~~~N~gL-~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~ 177 (409)
T cd00649 103 LNSWPDNVNL-DKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWL 177 (409)
T ss_pred ccCcHhhhhH-HHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcc
Confidence 9999999999 78999999999986 55799999999999999999999999999999999764320
Q ss_pred -------------------------cCcC--CCCCCCCCHHHHHHHHHhCCCCcccceee-ccccccccccccccccccc
Q 020449 158 -------------------------SVKG--NLPEPTFNLDELNQMFAKHGLSQIDMIAL-SGAHTLGFSHCDRFANRIY 209 (326)
Q Consensus 158 -------------------------~~~~--~lP~p~~~~~~l~~~F~~~Gls~~elVaL-sGaHTiG~~hc~~f~~Rl~ 209 (326)
.+++ .||+|..++.+|++.|.+|||+++||||| +||||||++||..|.+||.
T Consensus 178 ~~~~~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg 257 (409)
T cd00649 178 ADKRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG 257 (409)
T ss_pred cccccccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC
Confidence 1223 79999999999999999999999999999 5999999999999999982
Q ss_pred cCCCCCCCCCCCCHHHHHHHh--hcCCCCCC-CCccccCC---CCCCCccChHHHHHHhh--------------------
Q 020449 210 SFSSSSPVDPSLDPAYAQQLM--QSCPRNVD-PQIAINMD---PVTPRTFDNMYYQNLVA-------------------- 263 (326)
Q Consensus 210 ~f~g~~~~dp~~~~~~~~~L~--~~Cp~~~~-~~~~~~lD---~~tp~~FDN~Yy~~l~~-------------------- 263 (326)
+||++++.|+..|+ +.||.+.+ ++.++.+| +.||.+|||+||++|++
T Consensus 258 -------~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~ 330 (409)
T cd00649 258 -------PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNA 330 (409)
T ss_pred -------CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCc
Confidence 69999999999995 89997533 34456787 58999999999999998
Q ss_pred ----------------CccccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHh--hcCCCCCCCCC
Q 020449 264 ----------------GKGLFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKL--GRVGVKTGNQG 316 (326)
Q Consensus 264 ----------------~~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km--~~lgv~tg~~G 316 (326)
+++||+||++|+.|++|+++|++||+|++.||++|++||+|| +.+|+++--.|
T Consensus 331 ~~~~~~~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~~~g 401 (409)
T cd00649 331 AGENTVPDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSRYLG 401 (409)
T ss_pred cccccCCCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhhhcC
Confidence 569999999999999999999999999999999999999999 69999986555
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=3.4e-55 Score=449.64 Aligned_cols=271 Identities=23% Similarity=0.270 Sum_probs=232.3
Q ss_pred CCCccc-cccCCccH-HHHHHHHHHHHHhhC--------CCccchhhHhhhccccc-------cCC-CCceeccCCCCCc
Q 020449 26 QLVENF-YSSTCPNV-ESIVNRVVSTKFSQT--------FITVPATLRLFFHDCFI-------VGC-DASVLIQSPNGDA 87 (326)
Q Consensus 26 ~l~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~Gc-DgSill~~~~~~~ 87 (326)
.+..+| |.+.+-+. .+.|+++|++.+... .+.+|.+|||+||++.+ +|| .|+|.+. +
T Consensus 38 p~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~-----P 112 (716)
T TIGR00198 38 PMGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA-----P 112 (716)
T ss_pred CCCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc-----c
Confidence 355556 55555433 257999999999874 47999999999999987 688 4788874 6
Q ss_pred ccCCcCCCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCccc-----------
Q 020449 88 EKDAPDNLSLAGDGFDTVVQAKQAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRA----------- 156 (326)
Q Consensus 88 E~~~~~N~~l~~~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~----------- 156 (326)
|++++.|.+| ++++.+++.||++ ||++|||||||+|||++||+.+|||.|+|.+||+|+..+..
T Consensus 113 ~~sw~~N~~L-dka~~lL~pIk~k----yp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l 187 (716)
T TIGR00198 113 LNSWPDNVNL-DKARRLLWPIKKK----YGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWL 187 (716)
T ss_pred ccCchhhhhH-HHHHHHHHHHHHH----CCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchh
Confidence 9999999999 7899999999985 89999999999999999999999999999999999954320
Q ss_pred ---------------c----------cCcCCCCCCCCCHHHHHHHHHhCCCCcccceeec-ccccccccccccccccccc
Q 020449 157 ---------------S----------SVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALS-GAHTLGFSHCDRFANRIYS 210 (326)
Q Consensus 157 ---------------~----------~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLs-GaHTiG~~hc~~f~~Rl~~ 210 (326)
. +...++|+|..++.+|++.|.+||||++|||||+ ||||||++||.+|.+||
T Consensus 188 ~~~~~~~~~l~~p~a~~~~Gliyvnpeg~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl-- 265 (716)
T TIGR00198 188 TSSREDRESLENPLAATEMGLIYVNPEGPDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI-- 265 (716)
T ss_pred hccccccccccccchhhhccccccCcccccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC--
Confidence 0 1112699999999999999999999999999995 99999999999999998
Q ss_pred CCCCCCCCCCCCHHHHHHHhhcCCCCC---CCCccccCC---CCCCCccChHHHHHHhhC--------------------
Q 020449 211 FSSSSPVDPSLDPAYAQQLMQSCPRNV---DPQIAINMD---PVTPRTFDNMYYQNLVAG-------------------- 264 (326)
Q Consensus 211 f~g~~~~dp~~~~~~~~~L~~~Cp~~~---~~~~~~~lD---~~tp~~FDN~Yy~~l~~~-------------------- 264 (326)
++||++++.|++.|+.+||.+. .++.++.+| +.||.+|||+||+||+.+
T Consensus 266 -----g~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~ 340 (716)
T TIGR00198 266 -----GPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAP 340 (716)
T ss_pred -----CCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeecccc
Confidence 2799999999999999998532 233356677 689999999999999974
Q ss_pred --------------ccccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhh--cCCCCCC
Q 020449 265 --------------KGLFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLG--RVGVKTG 313 (326)
Q Consensus 265 --------------~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~--~lgv~tg 313 (326)
+++|+||++|..|++|+++|+.||.|++.|+++|++||+||+ .+|++.-
T Consensus 341 ~~~p~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 341 EIIPDVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred cccccccccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 689999999999999999999999999999999999999998 5666553
No 12
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.4e-52 Score=423.32 Aligned_cols=274 Identities=23% Similarity=0.325 Sum_probs=233.6
Q ss_pred CCCccc-cccCCccH-HHHHHHHHHHHHhhC--------CCccchhhHhhhccccc-------cCCC-CceeccCCCCCc
Q 020449 26 QLVENF-YSSTCPNV-ESIVNRVVSTKFSQT--------FITVPATLRLFFHDCFI-------VGCD-ASVLIQSPNGDA 87 (326)
Q Consensus 26 ~l~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v-------~GcD-gSill~~~~~~~ 87 (326)
.+..+| |.+-+-.. .+.|+++|++.+... .+.+|.+|||+||++.+ +||+ |+|.+. +
T Consensus 40 p~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~-----p 114 (726)
T PRK15061 40 PMGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA-----P 114 (726)
T ss_pred CCCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc-----c
Confidence 355556 55555433 357999999999864 47999999999999986 6886 788874 6
Q ss_pred ccCCcCCCCCCcchhHHHHHHHHHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccc----------
Q 020449 88 EKDAPDNLSLAGDGFDTVVQAKQAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRAS---------- 157 (326)
Q Consensus 88 E~~~~~N~~l~~~g~~~I~~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~---------- 157 (326)
|.+++.|.+| +++..+++.||+++ |..||+||+|+||+..|||.+|||.|+|..||.|...+...
T Consensus 115 e~~w~~N~gL-~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l 189 (726)
T PRK15061 115 LNSWPDNVNL-DKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWL 189 (726)
T ss_pred cccchhhhhH-HHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCcccccc
Confidence 9999999999 78999999999987 56799999999999999999999999999999998654321
Q ss_pred ----------------------------cCcCCCCCCCCCHHHHHHHHHhCCCCcccceeec-ccccccccccccccccc
Q 020449 158 ----------------------------SVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALS-GAHTLGFSHCDRFANRI 208 (326)
Q Consensus 158 ----------------------------~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLs-GaHTiG~~hc~~f~~Rl 208 (326)
+-...+|+|..++.+|++.|.+|||+++|||||+ ||||||++||..|.+||
T Consensus 190 ~~~~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl 269 (726)
T PRK15061 190 GGDERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV 269 (726)
T ss_pred ccccccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc
Confidence 0012489999999999999999999999999995 99999999999999997
Q ss_pred ccCCCCCCCCCCCCHHHHHHHh--hcCCCCCC-CCccccCC---CCCCCccChHHHHHHhhC------------------
Q 020449 209 YSFSSSSPVDPSLDPAYAQQLM--QSCPRNVD-PQIAINMD---PVTPRTFDNMYYQNLVAG------------------ 264 (326)
Q Consensus 209 ~~f~g~~~~dp~~~~~~~~~L~--~~Cp~~~~-~~~~~~lD---~~tp~~FDN~Yy~~l~~~------------------ 264 (326)
++||.+++.+++.|. +.||.+.+ ++.+..+| +.||++|||+||++|+.+
T Consensus 270 -------gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~ 342 (726)
T PRK15061 270 -------GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKD 342 (726)
T ss_pred -------CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccC
Confidence 279999999999985 89997533 34456677 689999999999999984
Q ss_pred ------------------ccccccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhh--cCCCCCCCCC
Q 020449 265 ------------------KGLFTSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLG--RVGVKTGNQG 316 (326)
Q Consensus 265 ------------------~glL~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~--~lgv~tg~~G 316 (326)
++||+||++|..||+++++|++||+|+++|+++|++||+||+ .+|+++---|
T Consensus 343 ~~~~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~ry~g 414 (726)
T PRK15061 343 GAAEDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSRYLG 414 (726)
T ss_pred ccccccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhhhcC
Confidence 589999999999999999999999999999999999999994 4777664333
No 13
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=4.2e-50 Score=371.86 Aligned_cols=214 Identities=26% Similarity=0.348 Sum_probs=176.3
Q ss_pred HHHHhhCCCccchhhHhhhcccc-------ccCCCCceeccCCCCCcccC-CcCCCCCCcchhHHHHHHHHHHHhhCCCC
Q 020449 48 STKFSQTFITVPATLRLFFHDCF-------IVGCDASVLIQSPNGDAEKD-APDNLSLAGDGFDTVVQAKQAVEAQCPGV 119 (326)
Q Consensus 48 ~~~~~~~~~~a~~llRL~FHDc~-------v~GcDgSill~~~~~~~E~~-~~~N~~l~~~g~~~I~~iK~~le~~cp~~ 119 (326)
..+...++++++++|||+||||| ++||||||+++.. .+|+. .+.|.+| ++|+.|+.+ +
T Consensus 32 ~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~--~~En~G~~~n~~l--~~~~~i~~~----------~ 97 (264)
T cd08201 32 DCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELD--RPENIGSGFNTTL--NFFVNFYSP----------R 97 (264)
T ss_pred ccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCC--ChhhccCchhhcc--ccceeeccC----------c
Confidence 34555889999999999999999 8899999999743 46766 4556677 788777543 5
Q ss_pred CcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCcccccCcCCCCCCCCCHHHHHHHHHhCCCCcccceeecc-cccccc
Q 020449 120 VSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRASSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALSG-AHTLGF 198 (326)
Q Consensus 120 VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLsG-aHTiG~ 198 (326)
||||||||||||+||+.+|||.|+|++||+|++++.+ . .||.|+.++++|++.|+++||+++|||+|+| |||||+
T Consensus 98 VScADiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~---~-glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ 173 (264)
T cd08201 98 SSMADLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQ---A-GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGG 173 (264)
T ss_pred cCHHHHHHHHHHHHHHHcCCCeecccccCCCcccccc---c-cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeee
Confidence 9999999999999999999999999999999998864 2 4999999999999999999999999999995 999999
Q ss_pred ccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCccChHHHHHHhhCcc----------cc
Q 020449 199 SHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTFDNMYYQNLVAGKG----------LF 268 (326)
Q Consensus 199 ~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~g----------lL 268 (326)
+||..|.++.- |.. ..+...++| .||.+|||+||.+++.+.. .+
T Consensus 174 ahc~~f~~~~~---------~g~----------------~~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~ 227 (264)
T cd08201 174 VHSEDFPEIVP---------PGS----------------VPDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTT 227 (264)
T ss_pred cccccchhhcC---------Ccc----------------ccCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCc
Confidence 99998877641 100 001123456 6999999999999998742 36
Q ss_pred ccccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhc
Q 020449 269 TSDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGR 307 (326)
Q Consensus 269 ~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~ 307 (326)
.||..+++...-. .++.+| ++..|.+..+..+.||.+
T Consensus 228 ~sd~r~f~~d~n~-t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 228 NSDLRIFSSDGNV-TMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred cchhhheecCccH-HHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 8999999765544 567787 689999999999999974
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=6.4e-40 Score=307.41 Aligned_cols=221 Identities=17% Similarity=0.164 Sum_probs=180.6
Q ss_pred HHHHHHHhhCCCccchhhHhhhccccc-------cCCCCc-eeccCCCCCcccCCcCCCC--CCcchhHHHHHHHHHHHh
Q 020449 45 RVVSTKFSQTFITVPATLRLFFHDCFI-------VGCDAS-VLIQSPNGDAEKDAPDNLS--LAGDGFDTVVQAKQAVEA 114 (326)
Q Consensus 45 ~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDgS-ill~~~~~~~E~~~~~N~~--l~~~g~~~I~~iK~~le~ 114 (326)
+.+++.+.+..-+++.+|||+||++.+ +|++|+ |.| .+|++++.|.+ | .+.+.+++.||+++..
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl-----~pe~~w~~N~~~~L-~~~~~~Le~ik~~~~~ 90 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRL-----APQKDWEVNEPEEL-AKVLAVLEGIQKEFNE 90 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccC-----ccccCcCccCcHHH-HHHHHHHHHHHHHhcc
Confidence 567777778788999999999999986 799998 777 47999999998 8 6789999999998842
Q ss_pred h-CC-CCCcHHHHHHHhhHhHHHhcCC-----CCcccccCCCCCCCcccccC--cCCCCCCC------------CCHHHH
Q 020449 115 Q-CP-GVVSCADILAIAARDVVVLAGG-----APFSVELGRRDGLVSRASSV--KGNLPEPT------------FNLDEL 173 (326)
Q Consensus 115 ~-cp-~~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~--~~~lP~p~------------~~~~~l 173 (326)
. -+ ..||+||+|+||+..|||.+|| |.|++.+||.|.+.+..... ...+|.+. ...+.|
T Consensus 91 ~~~~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~L 170 (297)
T cd08200 91 SQSGGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEML 170 (297)
T ss_pred cccCCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHH
Confidence 1 11 1699999999999999999999 99999999999987643211 11345332 235789
Q ss_pred HHHHHhCCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCc
Q 020449 174 NQMFAKHGLSQIDMIALSGAH-TLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRT 252 (326)
Q Consensus 174 ~~~F~~~Gls~~elVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~ 252 (326)
++.|.++|||++|||||+||| ++|..|..+ +.|. ++.+|.+
T Consensus 171 rd~f~rlglsd~EmvaL~Gg~r~lG~~~~~s-------~~G~-------------------------------wT~~p~~ 212 (297)
T cd08200 171 VDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHGV-------------------------------FTDRPGV 212 (297)
T ss_pred HHHHHhCCCChHHHhheecchhhcccCCCCC-------CCCC-------------------------------CcCCCCc
Confidence 999999999999999999997 699887421 1121 2368999
Q ss_pred cChHHHHHHhhC--------------------cc-----ccccccccccCCCChHHHHhhccC--hhHHHHHHHHHHHHh
Q 020449 253 FDNMYYQNLVAG--------------------KG-----LFTSDQVLFTDASSQPTVNDFARN--PLDFNAAFATAMRKL 305 (326)
Q Consensus 253 FDN~Yy~~l~~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km 305 (326)
|||.||++|+.. .| .+.+|.+|.+|++.|++|+.||.| ++.||+||++||.|+
T Consensus 213 f~N~fF~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Kl 292 (297)
T cd08200 213 LTNDFFVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKV 292 (297)
T ss_pred cccHHHHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHH
Confidence 999999999952 01 267899999999999999999998 999999999999999
Q ss_pred hcCC
Q 020449 306 GRVG 309 (326)
Q Consensus 306 ~~lg 309 (326)
+++.
T Consensus 293 meld 296 (297)
T cd08200 293 MNLD 296 (297)
T ss_pred HhcC
Confidence 9874
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.2e-34 Score=298.28 Aligned_cols=220 Identities=17% Similarity=0.187 Sum_probs=177.5
Q ss_pred HHHHHHHHH---HhhCCCccchhhHhhhccccc-------cCCCCc-eeccCCCCCcccCCcCC--CCCCcchhHHHHHH
Q 020449 42 IVNRVVSTK---FSQTFITVPATLRLFFHDCFI-------VGCDAS-VLIQSPNGDAEKDAPDN--LSLAGDGFDTVVQA 108 (326)
Q Consensus 42 iV~~~v~~~---~~~~~~~a~~llRL~FHDc~v-------~GcDgS-ill~~~~~~~E~~~~~N--~~l~~~g~~~I~~i 108 (326)
+|+++|+.. +....-.++.|||++||++.+ +|++|+ |.|. +|++++.| .+| .+.+.+++.|
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~-----pe~~w~~N~p~gL-~~vl~~Le~I 502 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE-----PQKNWPVNEPTRL-AKVLAVLEKI 502 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc-----hhcCcccCCHHHH-HHHHHHHHHH
Confidence 446666554 455667889999999999986 799998 7774 69999999 788 6789999999
Q ss_pred HHHHHhhCCCCCcHHHHHHHhhHhHHHhc---CCC--CcccccCCCCCCCcccccCcCCCC---C------------CCC
Q 020449 109 KQAVEAQCPGVVSCADILAIAARDVVVLA---GGA--PFSVELGRRDGLVSRASSVKGNLP---E------------PTF 168 (326)
Q Consensus 109 K~~le~~cp~~VScADilalAar~av~~~---GGP--~~~v~~GR~D~~~s~~~~~~~~lP---~------------p~~ 168 (326)
|+++.. ..||.||+|+||+..|||.+ ||| .+++.+||.|.+.... +++...| . ...
T Consensus 503 k~~f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~ 578 (716)
T TIGR00198 503 QAEFAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVT 578 (716)
T ss_pred HHHcCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCC
Confidence 998731 26999999999999999998 898 5788999999987642 2333322 1 122
Q ss_pred CHHHHHHHHHhCCCCcccceeeccc-cccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCC
Q 020449 169 NLDELNQMFAKHGLSQIDMIALSGA-HTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDP 247 (326)
Q Consensus 169 ~~~~l~~~F~~~Gls~~elVaLsGa-HTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~ 247 (326)
....|++.|.++|||++|||||+|| |++|+.|..+ +.|. ++
T Consensus 579 ~~~~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s-------~~G~-------------------------------~T 620 (716)
T TIGR00198 579 PEELLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGS-------KHGV-------------------------------FT 620 (716)
T ss_pred HHHHHHHHHHhCCCChHHHHheecchhhccccCCCC-------CCCC-------------------------------Cc
Confidence 3567899999999999999999999 5999998532 1121 23
Q ss_pred CCCCccChHHHHHHhhCc--------------------c---c--cccccccccCCCChHHHHhhccCh--hHHHHHHHH
Q 020449 248 VTPRTFDNMYYQNLVAGK--------------------G---L--FTSDQVLFTDASSQPTVNDFARNP--LDFNAAFAT 300 (326)
Q Consensus 248 ~tp~~FDN~Yy~~l~~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~~~--~~F~~~Fa~ 300 (326)
.+|.+|||.||++|+... | + ..+|.+|.+|++.|++|+.||+|+ +.|++||++
T Consensus 621 ~~p~~f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~ 700 (716)
T TIGR00198 621 DRVGVLSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVA 700 (716)
T ss_pred CCCCccccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHH
Confidence 589999999999999621 2 2 277999999999999999999997 899999999
Q ss_pred HHHHhhcCC
Q 020449 301 AMRKLGRVG 309 (326)
Q Consensus 301 Am~Km~~lg 309 (326)
||.|+++++
T Consensus 701 Aw~Klm~ld 709 (716)
T TIGR00198 701 AWTKVMNLD 709 (716)
T ss_pred HHHHHHhCC
Confidence 999999987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=6.7e-34 Score=291.29 Aligned_cols=220 Identities=18% Similarity=0.195 Sum_probs=180.7
Q ss_pred HHHHHHHhhCCCccchhhHhhhccccc-------cCCCCc-eeccCCCCCcccCCcCCC--CCCcchhHHHHHHHHHHHh
Q 020449 45 RVVSTKFSQTFITVPATLRLFFHDCFI-------VGCDAS-VLIQSPNGDAEKDAPDNL--SLAGDGFDTVVQAKQAVEA 114 (326)
Q Consensus 45 ~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDgS-ill~~~~~~~E~~~~~N~--~l~~~g~~~I~~iK~~le~ 114 (326)
..+++.+....-..+.|||++||++.+ +|++|+ |.|. +|++++.|. +| .+.+.+++.||++...
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~-----Pq~~w~~N~p~~L-~~vl~~LE~Ik~~f~~ 515 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA-----PQKDWEVNEPAQL-AKVLAVLEGIQAEFNA 515 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc-----cccCccccCHHHH-HHHHHHHHHHHHHHhh
Confidence 567777777778899999999999986 799998 8884 699999999 88 6789999999999864
Q ss_pred hCC--CCCcHHHHHHHhhHhHHHhc---CC--CCcccccCCCCCCCcccccCc---CCCCCCC------------CCHHH
Q 020449 115 QCP--GVVSCADILAIAARDVVVLA---GG--APFSVELGRRDGLVSRASSVK---GNLPEPT------------FNLDE 172 (326)
Q Consensus 115 ~cp--~~VScADilalAar~av~~~---GG--P~~~v~~GR~D~~~s~~~~~~---~~lP~p~------------~~~~~ 172 (326)
.-. ..||.||+|+||+..|||.+ || |.|++.+||.|.+.... +++ ..+|.+. .....
T Consensus 516 ~~~~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~t-d~esf~~l~P~Adgfrny~~~~~~~~~e~~ 594 (726)
T PRK15061 516 AQSGGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQT-DVESFAVLEPKADGFRNYLKKGYSVSPEEL 594 (726)
T ss_pred ccCCCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCC-CcccccccCCCCccccccccccCCCCHHHH
Confidence 321 25999999999999999998 68 99999999999987532 232 2456533 23478
Q ss_pred HHHHHHhCCCCcccceeecccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCC
Q 020449 173 LNQMFAKHGLSQIDMIALSGAH-TLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPR 251 (326)
Q Consensus 173 l~~~F~~~Gls~~elVaLsGaH-TiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~ 251 (326)
|++.|.++|||++|||||+||| ++|..|-.+ +.| ..+.+|.
T Consensus 595 L~d~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S-------~~G-------------------------------~~T~~p~ 636 (726)
T PRK15061 595 LVDKAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHG-------------------------------VFTDRPG 636 (726)
T ss_pred HHHHHHhCCCChHHHhheecchhhcccCCCCC-------CCC-------------------------------CCcCCCC
Confidence 9999999999999999999997 788877321 111 1235899
Q ss_pred ccChHHHHHHhhC----------c----------c---c--cccccccccCCCChHHHHhhccC--hhHHHHHHHHHHHH
Q 020449 252 TFDNMYYQNLVAG----------K----------G---L--FTSDQVLFTDASSQPTVNDFARN--PLDFNAAFATAMRK 304 (326)
Q Consensus 252 ~FDN~Yy~~l~~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~K 304 (326)
+|||.||+||+.. . | + +.+|..|.+|++.|++|+.||.| +++|++||++||.|
T Consensus 637 ~fsNdfFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~K 716 (726)
T PRK15061 637 VLTNDFFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTK 716 (726)
T ss_pred ccccHHHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHH
Confidence 9999999999952 1 1 1 47899999999999999999998 99999999999999
Q ss_pred hhcCC
Q 020449 305 LGRVG 309 (326)
Q Consensus 305 m~~lg 309 (326)
+++++
T Consensus 717 vmeld 721 (726)
T PRK15061 717 VMNLD 721 (726)
T ss_pred HHhCC
Confidence 99986
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=271.05 Aligned_cols=256 Identities=22% Similarity=0.259 Sum_probs=203.9
Q ss_pred HHHHHHHHHHHhhC--------CCccchhhHhhhcccccc-CCCCceecc-CCC-CCcccCCcCCCCCCcchhHHHHHHH
Q 020449 41 SIVNRVVSTKFSQT--------FITVPATLRLFFHDCFIV-GCDASVLIQ-SPN-GDAEKDAPDNLSLAGDGFDTVVQAK 109 (326)
Q Consensus 41 ~iV~~~v~~~~~~~--------~~~a~~llRL~FHDc~v~-GcDgSill~-~~~-~~~E~~~~~N~~l~~~g~~~I~~iK 109 (326)
..|++++...+... .+.+|.+|||+||-+.++ --||.---. +.. +.++.++|.|.+| ++++.+++.||
T Consensus 70 ~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFaPlnSWPDN~nL-DKarRLLWPIK 148 (730)
T COG0376 70 AAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFAPLNSWPDNANL-DKARRLLWPIK 148 (730)
T ss_pred HHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecccccCCCcccch-HHHHHHhhhHh
Confidence 35777777777765 368999999999999872 112211111 122 5678899999999 89999999999
Q ss_pred HHHHhhCCCCCcHHHHHHHhhHhHHHhcCCCCcccccCCCCCCCccc---------------------------------
Q 020449 110 QAVEAQCPGVVSCADILAIAARDVVVLAGGAPFSVELGRRDGLVSRA--------------------------------- 156 (326)
Q Consensus 110 ~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~--------------------------------- 156 (326)
+++ ++.+|+||+++||+..|++.+|++++.+..||.|-..+..
T Consensus 149 kKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqMGL 224 (730)
T COG0376 149 KKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQMGL 224 (730)
T ss_pred Hhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhheeee
Confidence 987 7789999999999999999999999999999999887764
Q ss_pred -----ccCcCCCCCCCCCHHHHHHHHHhCCCCcccceeec-cccccccccccccccccccCCCCCCCCCCCCHHHHHHH-
Q 020449 157 -----SSVKGNLPEPTFNLDELNQMFAKHGLSQIDMIALS-GAHTLGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQL- 229 (326)
Q Consensus 157 -----~~~~~~lP~p~~~~~~l~~~F~~~Gls~~elVaLs-GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L- 229 (326)
.+ .+..|+|..+..+++..|+||+|+++|.|||+ ||||+|++|...-.+- -+++|.-.+--.+.|
T Consensus 225 IYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~-------vg~ePe~a~ie~qGlG 296 (730)
T COG0376 225 IYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASN-------VGPEPEAAPIEQQGLG 296 (730)
T ss_pred EEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhh-------cCCCccccchhhhccc
Confidence 22 24689999999999999999999999999998 6999999997642221 246776544334433
Q ss_pred -hhcCCCCCCC-Ccc---ccCCCCCCCccChHHHHHHhhC-----------------------------------ccccc
Q 020449 230 -MQSCPRNVDP-QIA---INMDPVTPRTFDNMYYQNLVAG-----------------------------------KGLFT 269 (326)
Q Consensus 230 -~~~Cp~~~~~-~~~---~~lD~~tp~~FDN~Yy~~l~~~-----------------------------------~glL~ 269 (326)
++.|..+.+. +.+ ...+..||++|||+||.+|+.. ..||+
T Consensus 297 W~~~~g~G~G~dtitsGlE~~Wt~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~Mlt 376 (730)
T COG0376 297 WANTYGSGKGPDTITSGLEGAWTTTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPMMLT 376 (730)
T ss_pred cccccCCCcCcccccccccccCCCCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCceeec
Confidence 5666654432 222 2356789999999999999862 24899
Q ss_pred cccccccCCCChHHHHhhccChhHHHHHHHHHHHHhhcCC
Q 020449 270 SDQVLFTDASSQPTVNDFARNPLDFNAAFATAMRKLGRVG 309 (326)
Q Consensus 270 SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lg 309 (326)
+|.+|.-||..++|.++|.+|++.|.+.|++||.||.+-.
T Consensus 377 tDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 377 TDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred cchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999998754
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.41 E-value=1.3e-12 Score=130.04 Aligned_cols=216 Identities=19% Similarity=0.226 Sum_probs=155.8
Q ss_pred HHHHHHHhhCCCccchhhHhhhccccc-------cCCCC-ceeccCCCCCcccCCcCCC--CCCcchhHHHHHHHHHHHh
Q 020449 45 RVVSTKFSQTFITVPATLRLFFHDCFI-------VGCDA-SVLIQSPNGDAEKDAPDNL--SLAGDGFDTVVQAKQAVEA 114 (326)
Q Consensus 45 ~~v~~~~~~~~~~a~~llRL~FHDc~v-------~GcDg-Sill~~~~~~~E~~~~~N~--~l~~~g~~~I~~iK~~le~ 114 (326)
..++..+....-....|+-.+|-.+-+ +|.+| .|.|. +.++++.|. -| .+-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa-----PqkdWevN~P~~l-~kvl~~le~iq~~fn- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA-----PQKDWEVNQPAEL-AKVLAVLEKIQKEFN- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec-----ccccCCCCCHHHH-HHHHHHHHHHHHHhc-
Confidence 356667777777888999999998865 57776 66674 679999996 34 356778888888775
Q ss_pred hCCCCCcHHHHHHHhhHhHHHhc---CCCC--cccccCCCCCCCcccccCcCC---CCC------------CCCCHHHHH
Q 020449 115 QCPGVVSCADILAIAARDVVVLA---GGAP--FSVELGRRDGLVSRASSVKGN---LPE------------PTFNLDELN 174 (326)
Q Consensus 115 ~cp~~VScADilalAar~av~~~---GGP~--~~v~~GR~D~~~s~~~~~~~~---lP~------------p~~~~~~l~ 174 (326)
..||.||+|+|++..+|+.+ +|-. +++.+||.|++..... ++.. -|- ...+..-|+
T Consensus 525 ---kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtD-v~sf~~LeP~aDGfRNy~~~~~~~~pe~~Lv 600 (730)
T COG0376 525 ---KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTD-VESFAVLEPIADGFRNYVKKDYVLTPEELLV 600 (730)
T ss_pred ---CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcc-hhhhhcccccchhhhhhccCCCcCCHHHHHH
Confidence 46999999999999999974 6665 4667899998765322 2111 111 112344577
Q ss_pred HHHHhCCCCcccceeeccccc-cccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCCCccccCCCCCCCcc
Q 020449 175 QMFAKHGLSQIDMIALSGAHT-LGFSHCDRFANRIYSFSSSSPVDPSLDPAYAQQLMQSCPRNVDPQIAINMDPVTPRTF 253 (326)
Q Consensus 175 ~~F~~~Gls~~elVaLsGaHT-iG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~tp~~F 253 (326)
+.=+-.+||.-||++|+||-- +|. ||.|+ ...|.-| .|..+
T Consensus 601 DkAqlL~LtapemtVLiGGlRvLg~-----------n~g~s-------------------------~~GVfT~--~pg~L 642 (730)
T COG0376 601 DKAQLLTLTAPEMTVLIGGLRVLGA-----------NYGGS-------------------------KHGVFTD--RPGVL 642 (730)
T ss_pred HHHHHhccCCccceEEEcceEeecc-----------CCCCC-------------------------ccceecc--Ccccc
Confidence 888889999999999998752 332 22221 1123333 58888
Q ss_pred ChHHHHHHhhC--------------------ccc-----cccccccccCCCChHHHHhhccC--hhHHHHHHHHHHHHhh
Q 020449 254 DNMYYQNLVAG--------------------KGL-----FTSDQVLFTDASSQPTVNDFARN--PLDFNAAFATAMRKLG 306 (326)
Q Consensus 254 DN~Yy~~l~~~--------------------~gl-----L~SD~~L~~d~~t~~~V~~yA~~--~~~F~~~Fa~Am~Km~ 306 (326)
.|.||.||+.- .|- -..|..+-+++..|.+.+-||.+ ++.|.+||+.||.|..
T Consensus 643 tndFFvnLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVM 722 (730)
T COG0376 643 TNDFFVNLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVM 722 (730)
T ss_pred cchhhhhhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHh
Confidence 88888888862 121 35788888999999999999964 7999999999999998
Q ss_pred cCC
Q 020449 307 RVG 309 (326)
Q Consensus 307 ~lg 309 (326)
++.
T Consensus 723 n~D 725 (730)
T COG0376 723 NLD 725 (730)
T ss_pred ccc
Confidence 874
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=56.06 E-value=43 Score=32.90 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=29.2
Q ss_pred cCCCCcccccCCCCCCCcccccCcCCCCCC---CCCHHHHHHHHHhCCCCc
Q 020449 137 AGGAPFSVELGRRDGLVSRASSVKGNLPEP---TFNLDELNQMFAKHGLSQ 184 (326)
Q Consensus 137 ~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p---~~~~~~l~~~F~~~Gls~ 184 (326)
+|-..+..+.||-+.+.-.........+.. -..+.++.+.|++.|+..
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T 230 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKT 230 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCe
Confidence 577778999999976532221111111211 235778888999989865
No 20
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=47.31 E-value=16 Score=28.46 Aligned_cols=19 Identities=37% Similarity=0.566 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHhhcCCCC
Q 020449 293 DFNAAFATAMRKLGRVGVK 311 (326)
Q Consensus 293 ~F~~~Fa~Am~Km~~lgv~ 311 (326)
...++|..||.||+.||..
T Consensus 2 ~m~~~F~~am~KlavLG~d 20 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHD 20 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-
T ss_pred hHHHHHHHHHHHHHHhcCC
Confidence 3567999999999999853
No 21
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.14 E-value=62 Score=24.61 Aligned_cols=29 Identities=7% Similarity=0.140 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHhhCCCccchhhHhhhccc
Q 020449 41 SIVNRVVSTKFSQTFITVPATLRLFFHDC 69 (326)
Q Consensus 41 ~iV~~~v~~~~~~~~~~a~~llRL~FHDc 69 (326)
-|.|+.+++.++++|.+-...||+.+---
T Consensus 23 fiark~~~k~lk~NPpine~~iR~M~~qm 51 (71)
T COG3763 23 FIARKQMKKQLKDNPPINEEMIRMMMAQM 51 (71)
T ss_pred HHHHHHHHHHHhhCCCCCHHHHHHHHHHh
Confidence 38999999999999999999999988654
No 22
>PHA03163 hypothetical protein; Provisional
Probab=30.80 E-value=50 Score=26.24 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=21.6
Q ss_pred CcchhHHHHHHHHHHHHHHhhc---------cCCCCCccccccCCc
Q 020449 1 MEMGVMREMMVFLFTILLIMQR---------GDGQLVENFYSSTCP 37 (326)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~fY~~sCP 37 (326)
|-+|--+--..+|++|+++.-. ...+-..+||+.+|-
T Consensus 1 m~~gw~~~~i~~li~lcl~~nv~~~~~~~n~t~p~~~~~FYs~~C~ 46 (92)
T PHA03163 1 MAMGWARHGIFLLICLCLLDNVSQVLCQNNSTTPHDFDMFHQYDCN 46 (92)
T ss_pred CCcchhhhhHHHHHHHHHhhhhHHHHHhcCCCCCCCCcccccCCCC
Confidence 5556544445566666653211 123456889999995
No 23
>PRK12346 transaldolase A; Provisional
Probab=22.55 E-value=51 Score=32.18 Aligned_cols=65 Identities=14% Similarity=0.110 Sum_probs=38.2
Q ss_pred CcHHHHHHHhhHhHHH--hcCCCCcccccCCCCCCCcccccCcCCCCC----CCCCHHHHHHHHHhCCCCcc
Q 020449 120 VSCADILAIAARDVVV--LAGGAPFSVELGRRDGLVSRASSVKGNLPE----PTFNLDELNQMFAKHGLSQI 185 (326)
Q Consensus 120 VScADilalAar~av~--~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~----p~~~~~~l~~~F~~~Gls~~ 185 (326)
|+|-=.+.+....|+. .+|-..+..+.||-|.+.-... ....++. +-..+.++.+.|++.|+..+
T Consensus 150 I~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~-~~~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~ 220 (316)
T PRK12346 150 INCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARK-PMDPYVVEEDPGVKSVRNIYDYYKQHRYETI 220 (316)
T ss_pred CceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhcc-ccccccccCCChHHHHHHHHHHHHHcCCCcE
Confidence 5554444454444433 3688888999999987533211 1111211 22357788889989888654
No 24
>PLN00017 photosystem I reaction centre subunit VI; Provisional
Probab=22.12 E-value=50 Score=26.04 Aligned_cols=21 Identities=24% Similarity=0.330 Sum_probs=16.8
Q ss_pred hccChhHHHHHHHHHHHHhhc
Q 020449 287 FARNPLDFNAAFATAMRKLGR 307 (326)
Q Consensus 287 yA~~~~~F~~~Fa~Am~Km~~ 307 (326)
|-..|+.||+.|+..+.|=+.
T Consensus 38 Y~~~QskFFe~~A~~~tkR~~ 58 (90)
T PLN00017 38 YNPLQSKFFETFAAPFTKRGL 58 (90)
T ss_pred CChHHHHHHHHHhhhhhHHHH
Confidence 666799999999998877443
No 25
>PLN02161 beta-amylase
Probab=21.64 E-value=1.5e+02 Score=30.88 Aligned_cols=34 Identities=26% Similarity=0.486 Sum_probs=23.5
Q ss_pred HHHhhccChhHHHHHHHHHHHHhh-----cCCCCCCCCCcccc
Q 020449 283 TVNDFARNPLDFNAAFATAMRKLG-----RVGVKTGNQGEIRR 320 (326)
Q Consensus 283 ~V~~yA~~~~~F~~~Fa~Am~Km~-----~lgv~tg~~GeiR~ 320 (326)
-++.|. .|.+.|...|.-+. .|.|=-|+.||.|-
T Consensus 234 plq~Y~----Dfm~SFr~~F~~~~~~~I~eI~VGlGP~GELRY 272 (531)
T PLN02161 234 AVQCYE----DFMLSFSTKFEPYIGNVIEEISIGLGPSGELRY 272 (531)
T ss_pred HHHHHH----HHHHHHHHHHHHHhcCceEEEEeccccCccccC
Confidence 356673 47777777777654 44455589999985
Done!