Your job contains 1 sequence.
>020454
MPRTTTLECPGCPPLRALTFDSLGLIKVIEARGEHGGVPKVVERWGDPHSSNCVLAASID
DSQNDPLLAVARKNGLTDILNPLNGDLRVAISNAGDSGAQPEDDGIVGLHLFKRQREESS
SRSRTLLTCTTKGKASMRSIEVTKVSAESSCSTVKSWNVCASGTIAFSKVDISEKFSLFG
GKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVR
LYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKC
SGSIRSIARHPTLPIIASCGFLEAAS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020454
(326 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2013678 - symbol:AT1G29320 "AT1G29320" species... 996 2.1e-100 1
ZFIN|ZDB-GENE-060929-1138 - symbol:wdr74 "WD repeat domai... 275 7.4e-27 2
UNIPROTKB|Q58D06 - symbol:WDR74 "WD repeat-containing pro... 266 4.8e-23 1
UNIPROTKB|I3LD53 - symbol:WDR74 "Uncharacterized protein"... 263 1.0e-22 1
UNIPROTKB|E2R2B7 - symbol:WDR74 "Uncharacterized protein"... 261 1.6e-22 1
UNIPROTKB|E9PS41 - symbol:WDR74 "WD repeat-containing pro... 256 5.5e-22 1
UNIPROTKB|Q6RFH5 - symbol:WDR74 "WD repeat-containing pro... 256 6.1e-22 1
RGD|1582881 - symbol:Wdr74 "WD repeat domain 74" species:... 253 1.1e-21 1
MGI|MGI:2147427 - symbol:Wdr74 "WD repeat domain 74" spec... 253 1.4e-21 1
WB|WBGene00011538 - symbol:T06E6.1 species:6239 "Caenorha... 218 2.8e-16 1
DICTYBASE|DDB_G0290555 - symbol:DDB_G0290555 "WD40 repeat... 180 9.5e-12 2
>TAIR|locus:2013678 [details] [associations]
symbol:AT1G29320 "AT1G29320" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0080008 UniGene:At.15796 UniGene:At.40762
eggNOG:NOG329513 KO:K14841 EMBL:BT026364 IPI:IPI00543633
RefSeq:NP_174226.1 ProteinModelPortal:Q0V856 SMR:Q0V856
PaxDb:Q0V856 PRIDE:Q0V856 EnsemblPlants:AT1G29320.1 GeneID:839806
KEGG:ath:AT1G29320 TAIR:At1g29320 HOGENOM:HOG000029898
InParanoid:Q0V856 OMA:SHQVRLY PhylomeDB:Q0V856
ProtClustDB:CLSN2679695 Genevestigator:Q0V856 Uniprot:Q0V856
Length = 468
Score = 996 (355.7 bits), Expect = 2.1e-100, P = 2.1e-100
Identities = 192/321 (59%), Positives = 225/321 (70%)
Query: 1 MPRTTTLECPGCPPLRALTFDSLGLIKVIEARGEHGGVPKVVERWGDPHSSNCVLAASID 60
MPR E GCPP RALTFDSLGLIKV EARG+ G+P VV WG+ ++S VLAASID
Sbjct: 1 MPRVIPPENLGCPPFRALTFDSLGLIKVTEARGQERGIPTVVNTWGEMNASRSVLAASID 60
Query: 61 DSQNDPLLAVARKNGLTDILNPLNGDLRVAISNAGDSGAQPEDDGIVGLHLFKXXXXXXX 120
D +PLLAVARK+G +++NP NGDL + S GD G PED+ I LHLF+
Sbjct: 61 DRLRNPLLAVARKDGNVEVINPCNGDLHFSYSVFGDDGCSPEDNEISALHLFRKKIDDQT 120
Query: 121 XXXXXXXXXXXKGKASMRSIEVTKVSAESSC-STVKSWNVCASGTIAFSKVDISEKFSLF 179
KG S+RS++ S+ ++ K+W C SG I KVD SE FSLF
Sbjct: 121 ERSCTLLTCTKKGDVSLRSVKFPDAHGNSTDDASPKTWKACGSGEILVGKVDGSENFSLF 180
Query: 180 GGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GGK VE N+WDL++C KIW+AK PPKN+LGIFTPTWFTSA FLS DDHRKFV GT HQV
Sbjct: 181 GGKRVEANIWDLEQCTKIWSAKCPPKNNLGIFTPTWFTSATFLSKDDHRKFVTGTKSHQV 240
Query: 240 RLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGK 299
RLYD S QRRPV+SFDFRET I ++AE+PD IY+GN S DLAS DIRTGKLLG F+GK
Sbjct: 241 RLYDISTQRRPVLSFDFRETAITSIAEDPDGHTIYVGNASADLASFDIRTGKLLGSFLGK 300
Query: 300 CSGSIRSIARHPTLPIIASCG 320
CSGSIRS+ RHP +IASCG
Sbjct: 301 CSGSIRSVVRHPQHQVIASCG 321
>ZFIN|ZDB-GENE-060929-1138 [details] [associations]
symbol:wdr74 "WD repeat domain 74" species:7955
"Danio rerio" [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 SMART:SM00320
ZFIN:ZDB-GENE-060929-1138 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:NOG329513 KO:K14841 CTD:54663 HOVERGEN:HBG052672
OrthoDB:EOG43XV3Z HOGENOM:HOG000006658 EMBL:BC124328
IPI:IPI00802428 RefSeq:NP_001070031.1 UniGene:Dr.76164
ProteinModelPortal:Q08C95 STRING:Q08C95 PRIDE:Q08C95 GeneID:558996
KEGG:dre:558996 InParanoid:Q08C95 NextBio:20882731
ArrayExpress:Q08C95 Bgee:Q08C95 Uniprot:Q08C95
Length = 375
Score = 275 (101.9 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 69/180 (38%), Positives = 103/180 (57%)
Query: 144 KVSAESSCSTVKSWNVCASGTIAFSKVDISEKFSLF-GGKGVEVNVWDLDKCEK-IWTAK 201
KV E S TV+ NV I + + S++ + GGK + VWDL+K +K I+TAK
Sbjct: 110 KVWKEGSTDTVEV-NV--GKDICKMRQNQSQRHHVATGGKENPLKVWDLEKPDKPIFTAK 166
Query: 202 PPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSA-QRRPVMSFDFRETP 260
+ L + P W +F++ D K V T H+VR+YD S QRRPV+ DF E P
Sbjct: 167 NVAHDWLEMRVPVWVRDISFIADSD--KIVTCTGHHKVRVYDPSTPQRRPVLEADFGEYP 224
Query: 261 IKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCG 320
+ A++ + +GN G+LA +D+R G + GCF G +G++R + HP+LP++ASCG
Sbjct: 225 LTALSLPASQDAVVVGNTHGELAILDLRKGLVRGCFKG-LAGAVRGLQCHPSLPLVASCG 283
Score = 42 (19.8 bits), Expect = 7.4e-27, Sum P(2) = 7.4e-27
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 42 VERWGDPHSSNCVLAA 57
V WGDP+ S +L +
Sbjct: 46 VMAWGDPYESELLLGS 61
>UNIPROTKB|Q58D06 [details] [associations]
symbol:WDR74 "WD repeat-containing protein 74" species:9913
"Bos taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0016070 "RNA
metabolic process" evidence=IEA] [GO:0001825 "blastocyst formation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0016070 GO:GO:0001825 eggNOG:NOG329513
KO:K14841 GeneTree:ENSGT00390000015119 EMBL:BT021738 EMBL:BT021770
EMBL:BT021791 EMBL:BT021906 EMBL:BT025345 EMBL:BT025445
EMBL:BT026287 EMBL:BT029805 EMBL:BC114802 IPI:IPI00704403
RefSeq:NP_001014854.1 UniGene:Bt.4583 ProteinModelPortal:Q58D06
STRING:Q58D06 PRIDE:Q58D06 Ensembl:ENSBTAT00000012489 GeneID:505875
KEGG:bta:505875 CTD:54663 HOVERGEN:HBG052672 InParanoid:Q58D06
OMA:DLEQTQG OrthoDB:EOG43XV3Z NextBio:20867353 ArrayExpress:Q58D06
Uniprot:Q58D06
Length = 385
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 58/143 (40%), Positives = 83/143 (58%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 149 GGKENALKVWDLQGSEEPLFRAKNVRNDWLDLRVPVWDQDIQFLP--ESQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ AV P+ ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLEATYGEYPLTAVTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCG 320
G +GS+R + HP+ P++ASCG
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCG 288
>UNIPROTKB|I3LD53 [details] [associations]
symbol:WDR74 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001825 "blastocyst
formation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016070 GO:GO:0001825
KO:K14841 GeneTree:ENSGT00390000015119 CTD:54663 OMA:DLEQTQG
EMBL:FP340373 RefSeq:NP_001230324.1 UniGene:Ssc.6568
Ensembl:ENSSSCT00000027556 GeneID:100627951 KEGG:ssc:100627951
Uniprot:I3LD53
Length = 385
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 57/143 (39%), Positives = 83/143 (58%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 149 GGKENALKVWDLQGSEEPVFKAKNVRNDWLDLRVPIWDQDIQFLP--ESQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCG 320
G +GS+R + HP+ P++ASCG
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCG 288
>UNIPROTKB|E2R2B7 [details] [associations]
symbol:WDR74 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016070 "RNA metabolic process" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001825 "blastocyst
formation" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016070 GO:GO:0001825
KO:K14841 GeneTree:ENSGT00390000015119 CTD:54663 OMA:DLEQTQG
EMBL:AAEX03011662 RefSeq:XP_540899.2 Ensembl:ENSCAFT00000024618
GeneID:483778 KEGG:cfa:483778 NextBio:20858130 Uniprot:E2R2B7
Length = 383
Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 57/143 (39%), Positives = 82/143 (57%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 150 GGKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--ESQKLVTCTGYHQ 207
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 208 VRVYDPASPQRRPVLEVTYGEYPLMAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 267
Query: 298 GKCSGSIRSIARHPTLPIIASCG 320
G +GS+R + HP+ P++ASCG
Sbjct: 268 G-LAGSVRGLQCHPSKPLLASCG 289
>UNIPROTKB|E9PS41 [details] [associations]
symbol:WDR74 "WD repeat-containing protein 74" species:9606
"Homo sapiens" [GO:0001825 "blastocyst formation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016070 "RNA metabolic
process" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AP001160 GO:GO:0016070
GO:GO:0001825 HGNC:HGNC:25529 ChiTaRS:WDR74 IPI:IPI00984341
ProteinModelPortal:E9PS41 SMR:E9PS41 Ensembl:ENST00000525752
ArrayExpress:E9PS41 Bgee:E9PS41 Uniprot:E9PS41
Length = 328
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 56/143 (39%), Positives = 81/143 (56%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + +WDL E+ ++ AK + L + P W FL +K V T HQ
Sbjct: 92 GGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQ 149
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 150 VRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 209
Query: 298 GKCSGSIRSIARHPTLPIIASCG 320
G +GS+R + HP+ P++ASCG
Sbjct: 210 G-LAGSVRGLQCHPSKPLLASCG 231
>UNIPROTKB|Q6RFH5 [details] [associations]
symbol:WDR74 "WD repeat-containing protein 74" species:9606
"Homo sapiens" [GO:0001825 "blastocyst formation" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=IEA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0016070 GO:GO:0001825 eggNOG:NOG329513 KO:K14841 CTD:54663
HOVERGEN:HBG052672 OMA:DLEQTQG EMBL:AY500828 EMBL:AK001301
EMBL:AK025383 EMBL:AK292330 EMBL:BC006351 IPI:IPI00018192
IPI:IPI00165237 RefSeq:NP_060563.2 UniGene:Hs.654620
ProteinModelPortal:Q6RFH5 SMR:Q6RFH5 IntAct:Q6RFH5
MINT:MINT-1433008 STRING:Q6RFH5 PhosphoSite:Q6RFH5 DMDM:55976441
SWISS-2DPAGE:Q6RFH5 PaxDb:Q6RFH5 PRIDE:Q6RFH5 DNASU:54663
Ensembl:ENST00000278856 Ensembl:ENST00000311713
Ensembl:ENST00000525239 Ensembl:ENST00000529106 GeneID:54663
KEGG:hsa:54663 UCSC:uc001nvl.2 UCSC:uc001nvm.2
GeneCards:GC11M062600 HGNC:HGNC:25529 HPA:HPA037795
neXtProt:NX_Q6RFH5 PharmGKB:PA142670578 HOGENOM:HOG000006658
InParanoid:Q6RFH5 PhylomeDB:Q6RFH5 ChiTaRS:WDR74 GenomeRNAi:54663
NextBio:57206 ArrayExpress:Q6RFH5 Bgee:Q6RFH5 CleanEx:HS_WDR74
Genevestigator:Q6RFH5 GermOnline:ENSG00000133316 Uniprot:Q6RFH5
Length = 385
Score = 256 (95.2 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 56/143 (39%), Positives = 81/143 (56%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + +WDL E+ ++ AK + L + P W FL +K V T HQ
Sbjct: 149 GGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCG 320
G +GS+R + HP+ P++ASCG
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCG 288
>RGD|1582881 [details] [associations]
symbol:Wdr74 "WD repeat domain 74" species:10116 "Rattus
norvegicus" [GO:0001825 "blastocyst formation" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016070 "RNA metabolic
process" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 SMART:SM00320 RGD:1582881
Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:CH473953 KO:K14841
GeneTree:ENSGT00390000015119 CTD:54663 IPI:IPI00870610
RefSeq:NP_001103039.1 UniGene:Rn.14606 Ensembl:ENSRNOT00000066823
GeneID:690229 KEGG:rno:690229 UCSC:RGD:1582881 NextBio:740452
Uniprot:D3ZMQ7
Length = 366
Score = 253 (94.1 bits), Expect = 1.1e-21, P = 1.1e-21
Identities = 56/142 (39%), Positives = 80/142 (56%)
Query: 181 GKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GK + VWDL E+ ++ AK + L + P W FL +K V T HQV
Sbjct: 151 GKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQV 208
Query: 240 RLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIG 298
R+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D R G+LLGC G
Sbjct: 209 RIYDPASPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG 268
Query: 299 KCSGSIRSIARHPTLPIIASCG 320
+GS+R + HP+ P++ASCG
Sbjct: 269 -LAGSVRGLQCHPSKPLLASCG 289
>MGI|MGI:2147427 [details] [associations]
symbol:Wdr74 "WD repeat domain 74" species:10090 "Mus
musculus" [GO:0001825 "blastocyst formation" evidence=IMP]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016070
"RNA metabolic process" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2147427 GO:GO:0005634
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0016070 GO:GO:0001825 eggNOG:NOG329513 KO:K14841
GeneTree:ENSGT00390000015119 CTD:54663 HOVERGEN:HBG052672
OMA:DLEQTQG OrthoDB:EOG43XV3Z HOGENOM:HOG000006658 EMBL:BC019968
EMBL:AK077521 IPI:IPI00122120 RefSeq:NP_598900.1 UniGene:Mm.29627
ProteinModelPortal:Q8VCG3 SMR:Q8VCG3 STRING:Q8VCG3
PhosphoSite:Q8VCG3 PaxDb:Q8VCG3 PRIDE:Q8VCG3
Ensembl:ENSMUST00000049424 GeneID:107071 KEGG:mmu:107071
UCSC:uc008gmm.1 InParanoid:Q8VCG3 NextBio:358564 Bgee:Q8VCG3
CleanEx:MM_WDR74 Genevestigator:Q8VCG3
GermOnline:ENSMUSG00000042729 Uniprot:Q8VCG3
Length = 384
Score = 253 (94.1 bits), Expect = 1.4e-21, P = 1.4e-21
Identities = 56/142 (39%), Positives = 80/142 (56%)
Query: 181 GKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GK + VWDL E+ ++ AK + L + P W FL +K V T HQV
Sbjct: 150 GKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFLP--GSQKLVTCTGYHQV 207
Query: 240 RLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIG 298
R+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D R G+LLGC G
Sbjct: 208 RVYDPVSPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG 267
Query: 299 KCSGSIRSIARHPTLPIIASCG 320
+GS+R + HP+ P++ASCG
Sbjct: 268 -LAGSVRGLQCHPSKPLLASCG 288
>WB|WBGene00011538 [details] [associations]
symbol:T06E6.1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
SMART:SM00320 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0040035 EMBL:Z81117
eggNOG:NOG329513 KO:K14841 GeneTree:ENSGT00390000015119 PIR:T24597
RefSeq:NP_506824.1 ProteinModelPortal:O45757 STRING:O45757
PaxDb:O45757 EnsemblMetazoa:T06E6.1 GeneID:180039
KEGG:cel:CELE_T06E6.1 UCSC:T06E6.1 CTD:180039 WormBase:T06E6.1
HOGENOM:HOG000017817 InParanoid:O45757 OMA:ATKLHEM NextBio:907848
Uniprot:O45757
Length = 431
Score = 218 (81.8 bits), Expect = 2.8e-16, P = 2.8e-16
Identities = 53/142 (37%), Positives = 73/142 (51%)
Query: 180 GGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GG + W+L+ ++ W+AK P + LG+ P T A F I + T H++
Sbjct: 136 GGMKNLLKTWNLETGQQTWSAKNVPPDMLGLEIPIMITDARF--IPGQNTILEATKLHEM 193
Query: 240 RLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGC-FIG 298
RLYD AQRRPV F E PI + + I N G++ D+R+ C F G
Sbjct: 194 RLYDPRAQRRPVKKIPFMENPIMCTSLTYKTNQILAANSIGEMGLFDLRSKVHPMCKFKG 253
Query: 299 KCSGSIRSIARHPTLPIIASCG 320
+ +GSIRSI HPTLP+ AS G
Sbjct: 254 Q-AGSIRSITAHPTLPLAASVG 274
>DICTYBASE|DDB_G0290555 [details] [associations]
symbol:DDB_G0290555 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
space" evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0290555 GO:GO:0005615
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:AAFI02000164 eggNOG:NOG329513 KO:K14841 RefSeq:XP_635648.1
ProteinModelPortal:Q54FW9 EnsemblProtists:DDB0304570 GeneID:8627720
KEGG:ddi:DDB_G0290555 InParanoid:Q54FW9 OMA:KIYNIHK Uniprot:Q54FW9
Length = 508
Score = 180 (68.4 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 50/169 (29%), Positives = 90/169 (53%)
Query: 156 SWNVCASGTIAFSKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTW 215
S NV A+ F+ ++KF+ FGGK V + +WDL+K K ++AK + L + P
Sbjct: 157 SLNV-ATNLSGFAMNPSNDKFA-FGGKDVNLTIWDLEKQVKTYSAKFK-HDFLNLQEPVS 213
Query: 216 FTSAAFLSIDDHRKFVAGTNDHQVRLYD--TSAQRRPVMSFDFRETPIKAV--AEEPDSF 271
+++ DD K + G+ D +++ YD + R + F + PI+++ + + +
Sbjct: 214 INVVKYMN-DD--KILIGS-DFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQYTNQKEHY 269
Query: 272 NIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASCG 320
Y + G + D+RT + +G F +GS++ IA HPTLP++A+ G
Sbjct: 270 -FYASDSIGKVFCYDVRTSRQVGSFKDS-AGSVKDIAIHPTLPLLATVG 316
Score = 43 (20.2 bits), Expect = 9.5e-12, Sum P(2) = 9.5e-12
Identities = 11/22 (50%), Positives = 14/22 (63%)
Query: 58 SIDDSQNDPLLAVARKNGLTDI 79
+I ND LL VA +NGL D+
Sbjct: 83 AIHPLNNDKLL-VALENGLVDV 103
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.412 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 326 308 0.00078 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 615 (65 KB)
Total size of DFA: 226 KB (2123 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.63u 0.11s 22.74t Elapsed: 00:00:01
Total cpu time: 22.63u 0.11s 22.74t Elapsed: 00:00:01
Start: Tue May 21 03:06:41 2013 End: Tue May 21 03:06:42 2013