BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020454
(326 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q58D06|WDR74_BOVIN WD repeat-containing protein 74 OS=Bos taurus GN=WDR74 PE=2 SV=1
Length = 385
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + VWDL E+ ++ AK + L + P W FL + +K V T HQ
Sbjct: 149 GGKENALKVWDLQGSEEPLFRAKNVRNDWLDLRVPVWDQDIQFLP--ESQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ AV P+ ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLEATYGEYPLTAVTLTPEGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGF 321
G +GS+R + HP+ P++ASCG
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGL 289
>sp|Q6RFH5|WDR74_HUMAN WD repeat-containing protein 74 OS=Homo sapiens GN=WDR74 PE=1 SV=1
Length = 385
Score = 102 bits (254), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 81/144 (56%), Gaps = 5/144 (3%)
Query: 180 GGKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
GGK + +WDL E+ ++ AK + L + P W FL +K V T HQ
Sbjct: 149 GGKENALKIWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDIQFLP--GSQKLVTCTGYHQ 206
Query: 239 VRLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFI 297
VR+YD S QRRPV+ + E P+ A+ P ++ +GN G LA +D+R G+LLGC
Sbjct: 207 VRVYDPASPQRRPVLETTYGEYPLTAMTLTPGGNSVIVGNTHGQLAEIDLRQGRLLGCLK 266
Query: 298 GKCSGSIRSIARHPTLPIIASCGF 321
G +GS+R + HP+ P++ASCG
Sbjct: 267 G-LAGSVRGLQCHPSKPLLASCGL 289
>sp|Q8VCG3|WDR74_MOUSE WD repeat-containing protein 74 OS=Mus musculus GN=Wdr74 PE=2 SV=1
Length = 384
Score = 101 bits (251), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 181 GKGVEVNVWDLDKCEK-IWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GK + VWDL E+ ++ AK + L + P W FL +K V T HQV
Sbjct: 150 GKENALKVWDLQGSEEPVFRAKNVRNDWLDLRVPIWDQDTQFLP--GSQKLVTCTGYHQV 207
Query: 240 RLYD-TSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIG 298
R+YD S QRRPV+ + E P+ A+ P+ ++ +GN G LA +D R G+LLGC G
Sbjct: 208 RVYDPVSPQRRPVLEATYGEYPLTAMTLTPEGNSVIVGNTHGQLAEIDFRQGRLLGCLKG 267
Query: 299 KCSGSIRSIARHPTLPIIASCGF 321
+GS+R + HP+ P++ASCG
Sbjct: 268 -LAGSVRGLQCHPSKPLLASCGL 289
>sp|Q54FW9|Y0555_DICDI WD repeat-containing protein DDB_G0290555 OS=Dictyostelium
discoideum GN=DDB_G0290555 PE=4 SV=1
Length = 508
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 173 SEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVA 232
++KF+ FGGK V + +WDL+K K ++AK + L + P +++ D K +
Sbjct: 173 NDKFA-FGGKDVNLTIWDLEKQVKTYSAK-FKHDFLNLQEPVSINVVKYMNDD---KILI 227
Query: 233 GTNDHQVRLYD--TSAQRRPVMSFDFRETPIKAV--AEEPDSFNIYIGNGSGDLASVDIR 288
G+ D +++ YD + R + F + PI+++ + + + Y + G + D+R
Sbjct: 228 GS-DFRIKAYDLRSKTNRSSFLDVSFSKHPIQSIQYTNQKEHY-FYASDSIGKVFCYDVR 285
Query: 289 TGKLLGCFIGKCSGSIRSIARHPTLPIIASCGF 321
T + +G F +GS++ IA HPTLP++A+ G
Sbjct: 286 TSRQVGSF-KDSAGSVKDIAIHPTLPLLATVGL 317
>sp|O94698|NSA1_SCHPO Ribosome biogenesis protein nsa1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=nsa1 PE=3 SV=1
Length = 387
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 13/127 (10%)
Query: 185 EVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFL----------SIDDHR---KFV 231
E+ +W + K++ K +SL + W T F S DD F
Sbjct: 167 ELELWRTENVVKVFQGKNVKNDSLNLRVRVWITGIVFTEDIINVIDGKSEDDESLCFHFA 226
Query: 232 AGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGK 291
T+ Q+R YDT RRPV +FD +P+ V P +Y + ++ D K
Sbjct: 227 TITHYGQLRFYDTKHGRRPVSTFDVSTSPLSHVGLLPSIKLLYFADKRAQISIFDHSKKK 286
Query: 292 LLGCFIG 298
++G F G
Sbjct: 287 VIGRFQG 293
>sp|A3LVX0|NSA1_PICST Ribosome biogenesis protein NSA1 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=NSA1 PE=3 SV=2
Length = 430
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 177 SLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHR--KFVAGT 234
+F + VE N K E ++TAK + L + P W T F + + KF+ T
Sbjct: 185 EIFDTENVENNF----KSEVVFTAKNVKNDHLDLRVPVWITKIRFFTEQPEKGYKFITAT 240
Query: 235 NDHQVRLYDTSAQRRPVMSFDFRETPI 261
+ Q+R+YDT+ RRPV F + PI
Sbjct: 241 HYGQIRVYDTNHGRRPVRDFTVCQKPI 267
>sp|A5DKC4|NSA1_PICGU Ribosome biogenesis protein NSA1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=NSA1 PE=3 SV=2
Length = 398
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 107 VGLHLFKRQREESSSRSRTLLTCTTKGKASMRSIEVTKVSAESSCSTV--------KSWN 158
V LH+F S L+ GKA++ + K + E C V +++
Sbjct: 98 VSLHVF--------SEFDALVMGLDSGKAAL--VGFHKNTLEKECQIVDLPGGKPIEAFE 147
Query: 159 VCAS--GTIAF----SKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFT 212
C S G A+ + + I + F + GK V++ L+ E ++ AK + L +
Sbjct: 148 ACPSQPGVFAYGGKENDLRIVKMFEV--GKKVKL----LESVEVLFAAKNVKNDHLDLRV 201
Query: 213 PTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPI 261
P W T F+S + K + T Q+R+YDT+ R+P + PI
Sbjct: 202 PIWITKIRFISSKNSYKLITATRYGQLRIYDTNHGRKPAHDYQVCTNPI 250
>sp|Q6CKH7|NSA1_KLULA Ribosome biogenesis protein NSA1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=NSA1 PE=3 SV=1
Length = 436
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 18/160 (11%)
Query: 103 DDGIVGLHLFKRQREESSSRSRTLLTCTTKGKASMRSIEVTKVSAESSCSTVKSWNVCA- 161
+D V L+L K+ S+++ L T G ++ +++ + S + S + A
Sbjct: 121 EDQFVELYLIKK-----SAKNPIFLAATKSGNVTIIEVDL----HSTKISKIASHKIKAP 171
Query: 162 SGTIAFSKVDISEKFSL-FGGKGVEVNVW----DLDKCEKIWTAKPPPKNSLGIFTPTWF 216
+ +D S+KF + +GG+ V + D + IW AK P +++G+ P W
Sbjct: 172 VEFVTLYDLDKSDKFVMAYGGEENLVRLIELSSDFKEISDIWAAKNVPFDNIGLRVPAWD 231
Query: 217 TSAAFLSIDDH--RKFVAGTNDHQVRLYDTSAQR-RPVMS 253
+ FL + + F+ T Q+R Y T+A+ RPV S
Sbjct: 232 VALRFLESEKNGVYNFITITKYAQLRKYSTNAEDCRPVKS 271
>sp|Q6BUJ2|NSA1_DEBHA Ribosome biogenesis protein NSA1 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=NSA1 PE=3 SV=1
Length = 430
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 197 IWTAKPPPKNSLGIFTPTWFTSAAFLSID--DHRKFVAGTNDHQVRLYDTSAQRRPVMSF 254
I+TA+ + L + P W +S F D KF+ T QVR+YDT+ +RP+ +
Sbjct: 193 IFTARNVKNDHLDLRPPIWISSILFFEEKPKDGYKFLTSTRYGQVRIYDTTHGKRPIQDY 252
Query: 255 DFRETPI 261
E PI
Sbjct: 253 KVCEKPI 259
>sp|P49177|GBB_ARATH Guanine nucleotide-binding protein subunit beta OS=Arabidopsis
thaliana GN=GB1 PE=1 SV=1
Length = 377
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
F++G+ D RL+DT A R V +F E + V PD + G+ G DIRT
Sbjct: 220 FISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRT 279
Query: 290 GKLLGCF 296
G L +
Sbjct: 280 GHQLQVY 286
>sp|Q5A2T0|NSA1_CANAL Ribosome biogenesis protein NSA1 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=NSA1 PE=3 SV=1
Length = 406
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%)
Query: 193 KCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVM 252
K + I+ AK + L + P W T+ F K V T Q+RLYDT+ R+P
Sbjct: 192 KPQIIFKAKNVRNDHLELRVPIWITNILFAKAAKGYKLVTSTRYGQIRLYDTAEGRKPRK 251
Query: 253 SFDFRETPI 261
+ E PI
Sbjct: 252 DYKVTEKPI 260
>sp|Q754U4|NSA1_ASHGO Ribosome biogenesis protein NSA1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NSA1
PE=3 SV=1
Length = 435
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 19/126 (15%)
Query: 147 AESSCSTVKSWNVCASGTIAFSKV-DISEKFSL---FGG-----KGVEVNVWDLDKCEKI 197
A+ K+++V G + F+++ D+ E L +GG K VEV+ DL++ E+I
Sbjct: 151 ADGDLKLQKTFSV--RGPVEFAQLYDLEETEKLVFAYGGEDNLIKLVEVS-RDLEQLEQI 207
Query: 198 WTAKPPPKNSLGIFTPTWFTSAAFL-------SIDDHRKFVAGTNDHQVRLYDTSAQRRP 250
W AK + L + P W + FL S + +F+A T + Y T+ R+P
Sbjct: 208 WEAKNVKNDRLDLKVPIWPAALRFLQPAVSPASEGLNYQFIAVTRHSHLHFYQTTHGRKP 267
Query: 251 VMSFDF 256
S D
Sbjct: 268 FRSVDL 273
>sp|A5DX41|NSA1_LODEL Ribosome biogenesis protein NSA1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=NSA1 PE=3 SV=1
Length = 447
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 197 IWTAKPPPKNSLGIFTPTWFTSAAFLS---IDDHRKFVAGTNDHQVRLYDTSAQRRPVMS 253
++ AK + L + P W T+ F + + K + T Q+R+YDT R+PV
Sbjct: 237 LFKAKNVSNDHLNLRVPIWITNILFFTNNVTNGQYKLITSTRYGQLRIYDTKHGRKPVKD 296
Query: 254 FDFRETPI 261
+ TPI
Sbjct: 297 YPVSTTPI 304
>sp|A8QD31|ERB1_MALGO Ribosome biogenesis protein ERB1 OS=Malassezia globosa (strain ATCC
MYA-4612 / CBS 7966) GN=ERB1 PE=3 SV=2
Length = 864
Score = 39.3 bits (90), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 23/155 (14%)
Query: 178 LFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDH 237
LF V V+DL + + T +P G+ W +S DH + G+ D
Sbjct: 711 LFVATQRYVRVYDLVQQSLVKTLQP------GV---RWISSLDVHPSGDH--VIIGSYDR 759
Query: 238 QVRLYDTSAQRRPVMSFDFRETPIKAVAEEPD-----------SFNIYIGNGSGDLASVD 286
+V +D RP + + ++AVA P + ++Y G DL
Sbjct: 760 RVLWFDLDLSERPYKALRYHSRAVRAVAYHPRFPLFASAADDGTVHVYHGTVYSDLLQNA 819
Query: 287 IRTG-KLLGCFIGKCSGSIRSIARHPTLPIIASCG 320
+ K+L + + + SIA HPTLP + S G
Sbjct: 820 LLVPLKILRGHAVQDALGVLSIAWHPTLPWLVSAG 854
>sp|P93563|GBB_SOLTU Guanine nucleotide-binding protein subunit beta OS=Solanum
tuberosum GN=GB1 PE=2 SV=1
Length = 377
Score = 38.9 bits (89), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 31/69 (44%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
+ FV+G+ D RL+DT R +F E+ + V PD G+ G DI
Sbjct: 218 KLFVSGSCDTTARLWDTRVASRAQRTFHGHESDVNTVKFFPDGNRFGTGSDDGSCRLFDI 277
Query: 288 RTGKLLGCF 296
RTG L +
Sbjct: 278 RTGHQLQVY 286
>sp|Q40687|GBB_ORYSJ Guanine nucleotide-binding protein subunit beta OS=Oryza sativa
subsp. japonica GN=Os03g0669200 PE=1 SV=1
Length = 380
Score = 38.5 bits (88), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
FV+G+ D VRL+D R V ++ E I +V PD G+ G D+RT
Sbjct: 221 FVSGSCDATVRLWDIRIASRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDVRT 280
Query: 290 GKLLGCF 296
G L +
Sbjct: 281 GHQLQVY 287
>sp|P93398|GBB2_TOBAC Guanine nucleotide-binding protein subunit beta-2 OS=Nicotiana
tabacum PE=2 SV=1
Length = 377
Score = 38.5 bits (88), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
R FV+G+ D RL+DT R +F E + V PD G+ G DI
Sbjct: 218 RLFVSGSCDSTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSDDGTCRLFDI 277
Query: 288 RTGKLLGCF 296
RTG L +
Sbjct: 278 RTGHQLQVY 286
>sp|P49178|GBB_MAIZE Guanine nucleotide-binding protein subunit beta OS=Zea mays GN=GB1
PE=2 SV=1
Length = 380
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRT 289
FV+G+ D VRL+D R V ++ E + +V PD G+ G D+RT
Sbjct: 221 FVSGSCDTTVRLWDIRIASRAVRTYHGHEDDVNSVKFFPDGHRFGTGSDDGTCRLFDMRT 280
Query: 290 GKLLGCF 296
G L +
Sbjct: 281 GHQLQVY 287
>sp|P93339|GBB_NICPL Guanine nucleotide-binding protein subunit beta OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 377
Score = 38.5 bits (88), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 30/69 (43%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
R FV+G+ D RL+DT R +F E + V PD G+ G DI
Sbjct: 218 RLFVSGSCDTTARLWDTRVASRAQRTFYCHEGDVNTVKFFPDGNRFGTGSEDGTCRLFDI 277
Query: 288 RTGKLLGCF 296
RTG L +
Sbjct: 278 RTGHQLQVY 286
>sp|Q9LZW9|RTOR2_ARATH Regulatory-associated protein of TOR 2 OS=Arabidopsis thaliana
GN=RAPTOR2 PE=2 SV=2
Length = 1336
Score = 38.1 bits (87), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 71/178 (39%), Gaps = 27/178 (15%)
Query: 152 STVKSWNVCASGTIAFSKVDISEKFSLFGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIF 211
S+++ ASG A + G+ + + VWDLDK E++ + P F
Sbjct: 1108 SSIQGQKPGASGLNAVVDWQQQSGYLYVSGESLSIMVWDLDK-EQLVKSMP--------F 1158
Query: 212 TPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDF---------RETPIK 262
+A S + AG D VRLYD R P DF R +
Sbjct: 1159 ESGCSVTALSASQVHGSQLAAGFADGSVRLYDV---RTP----DFLVCATRPHQRVEKVV 1211
Query: 263 AVAEEP--DSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIAS 318
++ +P D I + +GD+ +D+R K I GS+ ++ H PIIAS
Sbjct: 1212 GLSFQPGLDPAKIVSASQAGDIQFLDLRRPKETYLTIDAHRGSLTALGVHRHAPIIAS 1269
>sp|Q29HG9|LST8_DROPS Protein LST8 homolog OS=Drosophila pseudoobscura pseudoobscura
GN=GA15597 PE=3 SV=1
Length = 315
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 225 DDHRKFVAGTNDHQVRLYDT-SAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLA 283
D + F AG DH VR++D SA FD E+P+ A P+ I +G+ +G++
Sbjct: 89 DGNWMFTAG-EDHHVRIWDMISAPPHCSRVFDC-ESPVNAACLHPNQVEIGMGSQNGNVF 146
Query: 284 SVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIAS 318
D+++ K C + + SI+ +A P +A+
Sbjct: 147 LWDVKSEK-HECIVPEVDASIQDVAISPDGHYLAA 180
>sp|Q6CEC9|NSA1_YARLI Ribosome biogenesis protein NSA1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=NSA1 PE=3 SV=1
Length = 410
Score = 37.0 bits (84), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 198 WTAKPPPKNSLGIFTPTWFTSAAFLSID-DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDF 256
+ A+ N + + P W + F + D D + + T Q+R+Y+T +RP F
Sbjct: 185 FQARNVKSNEIDMRVPVWISGILFQASDKDGFRVITATRHGQIRVYETWHGKRPKWDFKV 244
Query: 257 RETPIKAVAEEPDSFNI 273
+ P++ +A D+ N+
Sbjct: 245 TKDPLRTLAPGMDASNV 261
>sp|Q40507|GBB3_TOBAC Guanine nucleotide-binding protein subunit beta OS=Nicotiana
tabacum PE=2 SV=1
Length = 375
Score = 36.2 bits (82), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 29/69 (42%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
R FV+G+ D RL+D R +F E + V PD G+ G DI
Sbjct: 218 RLFVSGSCDTTARLWDNRVASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSEDGTCRLFDI 277
Query: 288 RTGKLLGCF 296
RTG L +
Sbjct: 278 RTGHQLQVY 286
>sp|Q5XGI5|WDR83_XENTR WD repeat domain-containing protein 83 OS=Xenopus tropicalis
GN=wdr83 PE=2 SV=1
Length = 314
Score = 36.2 bits (82), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 222 LSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGD 281
+ I DH + +AG+ D +R YD R+ M D+ +PI V+ DS + +
Sbjct: 159 IKISDH-EILAGSVDGNLRRYDL---RKGEMCADYLGSPITCVSFSQDSQCLLASSLDST 214
Query: 282 LASVDIRTGKLLGCFIG 298
L +D TG+LLG + G
Sbjct: 215 LRLLDKDTGELLGEYTG 231
>sp|P0CS34|ERB1_CRYNJ Ribosome biogenesis protein ERB1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ERB1 PE=3 SV=1
Length = 830
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 212 TPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSF 271
TP AF H F A T + +RLYD +AQ+ + + I ++
Sbjct: 661 TPGTIQRVAFHPSKPH--FFAATQRY-IRLYDLAAQKL-IRTLQSGVKWISSMDVHSGGD 716
Query: 272 NIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
N+ IG+ LA D+ + + ++RS+A HPTLP+ AS
Sbjct: 717 NLIIGSYDKKLAWFDMDLSAKPYKTLRYHNRALRSVAYHPTLPLFASA 764
>sp|P0CS35|ERB1_CRYNB Ribosome biogenesis protein ERB1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ERB1 PE=3 SV=1
Length = 830
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 212 TPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSF 271
TP AF H F A T + +RLYD +AQ+ + + I ++
Sbjct: 661 TPGTIQRVAFHPSKPH--FFAATQRY-IRLYDLAAQKL-IRTLQSGVKWISSMDVHSGGD 716
Query: 272 NIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
N+ IG+ LA D+ + + ++RS+A HPTLP+ AS
Sbjct: 717 NLIIGSYDKKLAWFDMDLSAKPYKTLRYHNRALRSVAYHPTLPLFASA 764
>sp|Q9Z2K5|LST8_RAT Target of rapamycin complex subunit LST8 OS=Rattus norvegicus
GN=Mlst8 PE=1 SV=2
Length = 326
Score = 35.4 bits (80), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 222 LSIDDHRKFVAGTNDHQVRLYDTSAQR-RPVMSFDFRETPIKAVAEEPDSFNIYIGNGSG 280
L I R +A T +R+YD ++ P++S+D I +V D +Y G
Sbjct: 48 LEITPDRSMIAATGYQHIRMYDLNSNNPNPIISYDGVSKNIASVGFHEDGRWMYTGGEDC 107
Query: 281 DLASVDIRTGKLLGCFIGKCSGSIRSIARHP 311
D+R+ L I + + I + HP
Sbjct: 108 TARIWDLRSRNLQCQRIFQVNAPINCVCLHP 138
>sp|Q03177|YMZ2_YEAST WD repeat-containing protein YMR102C OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YMR102C PE=1 SV=1
Length = 834
Score = 35.4 bits (80), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 191 LDKCEKIWTAKPPPKNSLGIFT-PTWFTSAAFLSIDDHRKFVAGTNDHQVRLY 242
+DK K+W P KNSL F P + T F DD R F++G DH+ RL+
Sbjct: 297 MDKTVKLW--HPDRKNSLKTFIHPDFVTCVEFHPTDD-RFFISGCLDHKCRLW 346
>sp|Q32LN7|WDR61_BOVIN WD repeat-containing protein 61 OS=Bos taurus GN=WDR61 PE=2 SV=1
Length = 305
Score = 35.4 bits (80), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ ++I + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
I TGKLL G IRS+ P ++ +
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTA 208
>sp|Q9GZS3|WDR61_HUMAN WD repeat-containing protein 61 OS=Homo sapiens GN=WDR61 PE=1 SV=1
Length = 305
Score = 35.4 bits (80), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ ++I + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQYLATGTHVGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
I TGKLL G IRS+ P ++ +
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTA 208
>sp|Q54D08|LST8_DICDI Protein LST8 homolog OS=Dictyostelium discoideum GN=lst8 PE=1 SV=1
Length = 304
Score = 35.0 bits (79), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 222 LSIDDHRKFVAGTNDHQVRLYDTSAQRR-PVMSFDFRETPIKAVAEEPDSFNIYIGNGSG 280
L I + ++A + Q RL++ + P MSFD + + V + + +Y G+ G
Sbjct: 39 LEITHDKLYIAAAGNPQTRLFEVNTNNNSPAMSFDGHKGNVTGVGFQKEGKWMYTGSEDG 98
Query: 281 DLASVDIRTGKLLGCFIG-KCSGSIRSIARHP 311
+ D+ K GC +CS + ++ HP
Sbjct: 99 TVKIWDL---KAPGCQRDYECSAPVNTVVLHP 127
>sp|Q5SQM0|EMAL6_MOUSE Echinoderm microtubule-associated protein-like 6 OS=Mus musculus
GN=Eml6 PE=2 SV=1
Length = 1958
Score = 35.0 bits (79), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETP-------IKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+DT +P+ D RET I++V + D + G ++
Sbjct: 250 FATGGRDGCIRLWDTDF--KPITKIDLRETEQGYKGLSIRSVCWKAD--RLLAGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPI 315
V +R K + G C G + ++A HP P+
Sbjct: 306 FEVIVRERDKPMLILQGHCEGELWALALHPKKPL 339
>sp|Q5VU92|DC121_HUMAN DDB1- and CUL4-associated factor 12-like protein 1 OS=Homo sapiens
GN=DCAF12L1 PE=2 SV=1
Length = 463
Score = 35.0 bits (79), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 1/114 (0%)
Query: 180 GGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQV 239
GGK E+ LD +W A L I P + + DD + G++ H V
Sbjct: 271 GGKNQELGAVSLDGYFHLWKAGSALSRLLSIRLPYFRDNVCLTYCDDMSVYAVGSHSH-V 329
Query: 240 RLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLL 293
D ++ + RE + I +G G G L D+R K L
Sbjct: 330 SFLDLRQDQQNIRPLCSREGGTGVRSLSFYRHIITVGTGQGSLLFYDVRAQKFL 383
>sp|Q6ZMW3|EMAL6_HUMAN Echinoderm microtubule-associated protein-like 6 OS=Homo sapiens
GN=EML6 PE=2 SV=2
Length = 1958
Score = 35.0 bits (79), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETP-------IKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+DT +P+ D RET I++V + D + G ++
Sbjct: 250 FATGGRDGCIRLWDTDF--KPITKIDLRETEQGYKGLSIRSVCWKAD--RLLAGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPI 315
V +R K + G C G + ++A HP P+
Sbjct: 306 FEVIVRERDKPMLILQGHCEGELWALALHPKKPL 339
>sp|P93397|GBB1_TOBAC Guanine nucleotide-binding protein subunit beta-1 OS=Nicotiana
tabacum PE=1 SV=1
Length = 377
Score = 35.0 bits (79), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 29/69 (42%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
R FV+G+ D RL+DT R +F E + V PD G+ G DI
Sbjct: 218 RLFVSGSCDTTARLWDTRVASRAQRTFYGHEGDVNTVKFFPDGNRFGTGSEDGTCRLFDI 277
Query: 288 RTGKLLGCF 296
RT L +
Sbjct: 278 RTEHQLQVY 286
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 34.7 bits (78), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 192 DKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQRRPV 251
DK K+W + W AF D + DH ++L+D S Q + +
Sbjct: 747 DKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSP--DGNTLASSAADHTIKLWDVS-QGKCL 803
Query: 252 MSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHP 311
+ +++VA D + G+G + + TG+ L +IG + S+ SIA P
Sbjct: 804 RTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGH-TNSVYSIAYSP 862
Query: 312 TLPIIAS 318
I+ S
Sbjct: 863 DSKILVS 869
>sp|Q4V7A0|WDR61_RAT WD repeat-containing protein 61 OS=Rattus norvegicus GN=Wdr61 PE=1
SV=1
Length = 305
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ +++ + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQHLATGTHMGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
I TGKLL G IRS+ P ++ +
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTA 208
>sp|Q9ERF3|WDR61_MOUSE WD repeat-containing protein 61 OS=Mus musculus GN=Wdr61 PE=2 SV=1
Length = 305
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS + ++ ++ WDL+ +++ + P ++ + F+P D
Sbjct: 70 VDISHTLPIAASSSLDAHIRLWDLENGKQMKSIDAGPVDAWTLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ GT+ +V ++ + ++ S D R I ++A PD + G G + D
Sbjct: 118 SQYLATGTHMGKVNIFGVESGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
I TGKLL G IRS+ P ++ +
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTA 208
>sp|Q5VW00|DC122_HUMAN DDB1- and CUL4-associated factor 12-like protein 2 OS=Homo sapiens
GN=DCAF12L2 PE=2 SV=1
Length = 463
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 1/115 (0%)
Query: 179 FGGKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQ 238
F GK E+ LD +W A+ L I P + D+ + G+ H
Sbjct: 270 FSGKNQELGAVSLDGYFHLWKARSTLSRLLSIRLPYCRENVCLTYCDELSLYAVGSQSH- 328
Query: 239 VRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDIRTGKLL 293
V D +++ + RE + I +G G G L DIR K L
Sbjct: 329 VSFLDPRQRQQNIRPLCSREGGTGVRSLSFYQHIITVGTGHGSLLFYDIRAQKFL 383
>sp|Q05BV3|EMAL5_HUMAN Echinoderm microtubule-associated protein-like 5 OS=Homo sapiens
GN=EML5 PE=2 SV=3
Length = 1969
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 12/94 (12%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRET-------PIKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+D + +P+ D RET +++V D +I +G ++
Sbjct: 250 FATGGRDGCIRLWDLTF--KPITVIDLRETDQGYKGLSVRSVCWRGD--HILVGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPI 315
+ ++ K G C G + ++A HPT P+
Sbjct: 306 FEIVVQERNKPFLIMQGHCEGELWALAVHPTKPL 339
>sp|Q93YQ1|RTOR1_ARATH Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana
GN=RAPTOR1 PE=1 SV=1
Length = 1344
Score = 33.9 bits (76), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 13/142 (9%)
Query: 181 GKGVEVNVWDLDKCEKIWTAKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVR 240
G+ V +WDL+K + + + P ++ G+ +A S + AG D +R
Sbjct: 1146 GETSTVTLWDLEKEQLVRSV--PSESECGV-------TALSASQVHGGQLAAGFADGSLR 1196
Query: 241 LYDTSAQRRPVMSFDFRETPIKAV--AEEP--DSFNIYIGNGSGDLASVDIRTGKLLGCF 296
LYD + V + + + V + +P D + + +GD+ +D+RT +
Sbjct: 1197 LYDVRSPEPLVCATRPHQKVERVVGLSFQPGLDPAKVVSASQAGDIQFLDLRTTRDTYLT 1256
Query: 297 IGKCSGSIRSIARHPTLPIIAS 318
I GS+ ++A H PIIAS
Sbjct: 1257 IDAHRGSLTALAVHRHAPIIAS 1278
>sp|P32330|DGR2_YEAST 2-deoxy-glucose resistant protein 2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DGR2 PE=1 SV=1
Length = 852
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 191 LDKCEKIWTAKPPPKNSLGIFT-PTWFTSAAFLSIDDHRKFVAGTNDHQVRLY 242
+DK K+W P K SL F P + TSA F DD R + G DH+ RL+
Sbjct: 299 MDKTAKLW--HPERKYSLKTFVHPDFVTSAIFFPNDD-RFIITGCLDHRCRLW 348
>sp|Q3KQ62|WDR83_XENLA WD repeat domain-containing protein 83 OS=Xenopus laevis GN=wdr83
PE=2 SV=1
Length = 314
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 228 RKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVDI 287
+ +AG+ D +R YD R+ M D+ +PI V+ DS + + L +D
Sbjct: 164 HEILAGSVDGNLRRYDL---RKGEMCADYLGSPITCVSFSQDSQCLLASSLDSTLRLLDK 220
Query: 288 RTGKLLGCFIG 298
TG+LLG + G
Sbjct: 221 DTGELLGEYTG 231
>sp|Q6ED65|EMAL5_RAT Echinoderm microtubule-associated protein-like 5 OS=Rattus
norvegicus GN=Eml5 PE=1 SV=2
Length = 1977
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETP-------IKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+D + +P+ D RET +++V D +I +G ++
Sbjct: 250 FATGGRDGCIRLWDLTF--KPITVIDLRETEQGYKGLSVRSVCWRGD--HILVGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPI 315
+ + K G C G + ++A HPT P+
Sbjct: 306 FEIVVHERNKPFLIMQGHCEGELWALAVHPTKPL 339
>sp|Q09715|TUP11_SCHPO Transcriptional repressor tup11 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=tup11 PE=1 SV=1
Length = 614
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 43/172 (25%)
Query: 145 VSAESSCSTVKSWNVCASGTIAFSKVDISEKFS-----LFGGKGVEVNVWDLDKCEKIWT 199
V+ +C V +N+ T+ V KFS L G NV+D+ +K++T
Sbjct: 292 VTYNPACKRV--FNINLVHTLEHPSVVCCVKFSNNGKYLATGCNQAANVFDVQTGKKLFT 349
Query: 200 ---AKPPPKNSLGIFTPTWFTSAAFLSIDDHRKFVAGTNDHQVRLYDTSAQR-RPVMSFD 255
P P L + T + +L V GT D Q++L+D S Q+ R V S
Sbjct: 350 LHEESPDPSRDLYVRTIAFSPDGKYL--------VTGTEDRQIKLWDLSTQKVRYVFS-- 399
Query: 256 FRETPIKAVAEEPDSFNI-------YIGNGSGDLASVDIRTGKLLGCFIGKC 300
E D +++ +I +GSGD RT +L G+C
Sbjct: 400 ---------GHEQDIYSLDFSHNGRFIVSGSGD------RTARLWDVETGQC 436
>sp|Q8BQM8|EMAL5_MOUSE Echinoderm microtubule-associated protein-like 5 OS=Mus musculus
GN=Eml5 PE=2 SV=2
Length = 1977
Score = 33.9 bits (76), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 12/94 (12%)
Query: 230 FVAGTNDHQVRLYDTSAQRRPVMSFDFRETP-------IKAVAEEPDSFNIYIGNGSGDL 282
F G D +RL+D + +P+ D RET +++V D +I +G ++
Sbjct: 250 FATGGRDGCIRLWDLTF--KPITVIDLRETEQGYKGLSVRSVCWRGD--HILVGTQDSEI 305
Query: 283 ASVDIRT-GKLLGCFIGKCSGSIRSIARHPTLPI 315
+ + K G C G + ++A HPT P+
Sbjct: 306 FEIVVHERNKPFLIMQGHCEGELWALAVHPTKPL 339
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 13/103 (12%)
Query: 228 RKFVAGTNDHQVRLYDTSAQR----RPVMSFDFRETPIKAVAEEPDSF--------NIYI 275
+ FV G D V L+D S +R + D + E+ S +I +
Sbjct: 914 KGFVTGGKDGMVALWDDSFERCLKTYAIKRADLAPGSKGLLLEDNPSIRAISLGHGHILV 973
Query: 276 GNGSGDLASVDIRTGKLLGCFIGKCSGSIRSIARHPTLPIIAS 318
G +G++ VD ++G + G G + +A HP LPI A+
Sbjct: 974 GTKNGEILEVD-KSGPITLLVQGHMEGEVWGLATHPYLPICAT 1015
>sp|Q9D994|WDR38_MOUSE WD repeat-containing protein 38 OS=Mus musculus GN=Wdr38 PE=2 SV=1
Length = 303
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Query: 226 DHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASV 285
D R + ++DH +RL+D A+ + + + ++ V+ PDS + G
Sbjct: 79 DGRLIASSSSDHSIRLWDV-ARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVW 137
Query: 286 DIRTGKLLGCFIGKCSGSIRSIARHPTLPIIAS 318
++++G+ + +G C SI+S PT +A+
Sbjct: 138 EVQSGRRVHLLVGHCD-SIQSSDFSPTSDSLAT 169
>sp|Q5ZJH5|WDR61_CHICK WD repeat-containing protein 61 OS=Gallus gallus GN=WDR61 PE=2 SV=1
Length = 305
Score = 33.5 bits (75), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 17/153 (11%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VDIS S+ ++ ++ WDL+ ++I + P ++ + F+P D
Sbjct: 70 VDISHTGSIAASSSLDAHIRLWDLETGKQIKSIDAGPVDAWSLAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ G++ +V ++ ++ S D R I ++A PD + G G + D
Sbjct: 118 SQFLATGSHVGKVNIFGVETGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
I TGKLL G IRS+ P ++ +
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTA 208
>sp|Q6PBD6|WDR61_XENTR WD repeat-containing protein 61 OS=Xenopus tropicalis GN=wdr61 PE=2
SV=1
Length = 305
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 17/153 (11%)
Query: 170 VDISEKFSLFGGKGVEVNV--WDLDKCEKIWTAKPPPKNSLGI-FTPTWFTSAAFLSIDD 226
VD+S ++ ++ ++ WDL+ ++I P ++ + F+P D
Sbjct: 70 VDVSPSGNIMASSSLDAHIRLWDLESGKQIRAIDAGPVDAWSVAFSP------------D 117
Query: 227 HRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEEPDSFNIYIGNGSGDLASVD 286
+ G++ +V ++ ++ S D R I ++A PD + G G + D
Sbjct: 118 SQHLATGSHVGKVNIFGVETGKKE-YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 176
Query: 287 IRTGKLLGCFIGKCSGSIRSIARHPTLPIIASC 319
I TGKLL G IRS+ P ++ +
Sbjct: 177 IATGKLLHTLEGHAM-PIRSLTFSPDSQLLVTA 208
>sp|Q5F3D7|UTP15_CHICK U3 small nucleolar RNA-associated protein 15 homolog OS=Gallus
gallus GN=UTP15 PE=2 SV=1
Length = 520
Score = 33.5 bits (75), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 210 IFTPTWFTSAAFLSI--DDHRKFVAGTNDHQVRLYDTSAQRRPVMSFDFRETPIKAVAEE 267
I T + F AA+ + DD + VAG+ + +RL+D S R P+ FD + V
Sbjct: 73 IKTFSRFKDAAYCATYRDDGKLLVAGSEEGSIRLFDISG-RAPLRQFDGHTKAVHVVGFL 131
Query: 268 PDSFNIYIG 276
D + I+ G
Sbjct: 132 SDKYRIFSG 140
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 123,267,337
Number of Sequences: 539616
Number of extensions: 5075226
Number of successful extensions: 12316
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 12256
Number of HSP's gapped (non-prelim): 126
length of query: 326
length of database: 191,569,459
effective HSP length: 118
effective length of query: 208
effective length of database: 127,894,771
effective search space: 26602112368
effective search space used: 26602112368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)