BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020462
MTALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVEELGNLLENNPLV
RSLIIEGDVKGNTPLHVLAAVRPDEFDVRMIRKMQANFDAVNKQNVSVTNILLNGYPELK
EEIQKLSKDVGRGQYSDGVIRGPKYLVGQNDDTKDDYKDTRASHLVVAALIATVAFAAAF
TIPGGYRSENGTAILRRNTAFQAFIVADSIAMVFSLSAVFTHFLMALKIEATKDFDEALF
AASIWFTLFSMGAMVIAFVTGTFAMLVPSLGLAIITCLIGLSFFFLAFWLIKLSIFLSRT
KVIDCSKSPSLFINKMIDFQFNININ

High Scoring Gene Products

Symbol, full name Information P value
AT4G03460 protein from Arabidopsis thaliana 7.3e-15
ANK1
ankyrin-like1
protein from Arabidopsis thaliana 1.4e-07
AT1G03670 protein from Arabidopsis thaliana 1.4e-06
AT1G07710 protein from Arabidopsis thaliana 4.2e-06
AT3G09550 protein from Arabidopsis thaliana 3.1e-05
ITN1
INCREASED TOLERANCE TO NACL
protein from Arabidopsis thaliana 3.6e-05
AT4G14390 protein from Arabidopsis thaliana 4.9e-05
AT2G31820 protein from Arabidopsis thaliana 8.1e-05
ACD6
AT4G14400
protein from Arabidopsis thaliana 0.00083

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020462
        (326 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2128781 - symbol:AT4G03460 "AT4G03460" species...   193  7.3e-15   2
TAIR|locus:2181768 - symbol:ANK1 "ankyrin-like1" species:...   121  1.4e-07   2
TAIR|locus:2020833 - symbol:AT1G03670 "AT1G03670" species...   140  1.4e-06   2
TAIR|locus:2026489 - symbol:AT1G07710 "AT1G07710" species...   103  4.2e-06   2
TAIR|locus:2075009 - symbol:AT3G09550 species:3702 "Arabi...   100  3.1e-05   2
TAIR|locus:2092522 - symbol:ITN1 "INCREASED TOLERANCE TO ...   111  3.6e-05   2
TAIR|locus:2129685 - symbol:AT4G14390 "AT4G14390" species...    93  4.9e-05   2
TAIR|locus:2045233 - symbol:AT2G31820 species:3702 "Arabi...   109  8.1e-05   2
TAIR|locus:2129690 - symbol:ACD6 "AT4G14400" species:3702...    89  0.00083   2


>TAIR|locus:2128781 [details] [associations]
            symbol:AT4G03460 "AT4G03460" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            InterPro:IPR027001 PANTHER:PTHR24177 InterPro:IPR027002
            InterPro:IPR026961 PANTHER:PTHR24177:SF1 Pfam:PF13962
            IPI:IPI00536308 RefSeq:NP_192255.2 UniGene:At.54114
            ProteinModelPortal:F4JG84 SMR:F4JG84 PRIDE:F4JG84
            EnsemblPlants:AT4G03460.1 GeneID:827916 KEGG:ath:AT4G03460
            OMA:WMALISA Uniprot:F4JG84
        Length = 677

 Score = 193 (73.0 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
 Identities = 83/295 (28%), Positives = 120/295 (40%)

Query:     4 LHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVS--FYVXXXXXXXXXXPLVR 61
             +H+A   GYV I+KAI+ +  +  EL+D    N LH A  +    V              
Sbjct:   354 IHMAVKYGYVKILKAILKRCPDALELLDRENQNVLHVAAKNGKIEVLKFILRCCKDKNKE 413

Query:    62 SLIIEGDVKGNTPLHVLAAVRPDEFDVRMIR-KMQANFDAVNKQNVSVTNILLNGYPELK 120
              LI E D  GNTPLH LA        V M+    + +   +N   V+  +I         
Sbjct:   414 KLINEEDANGNTPLH-LATKNWHPKVVSMLTWDNRVDLKTLNHDGVTALDIAEKNMDSSY 472

Query:   121 EEIQKLSKDVGRGQYSDGVIRGPKYL----VGQNDDTKDDYKDTRASHXXXXXXXXXXXX 176
                ++L+        S G  RGPK +    V QN D    YKD   +             
Sbjct:   473 TFFERLT---WMALISAGAPRGPKLILSTPVTQNSDG-GKYKDRVNTLLLVATLVATMTF 528

Query:   177 XXXXXXPGGYRSE--N-GTAILRRNTAFQAFIVADSIAMVFSLSAVFTHFLMALKIEATK 233
                   PGGY     N G A L + TAFQ F+V D++AM  S+  +     +AL      
Sbjct:   529 TAGFTLPGGYNGSVPNFGMATLAKKTAFQVFLVFDTLAMYCSIITI-----VALIWAQLG 583

Query:   234 DFDEALFAASIWFTLFSMG--AMVIAFVTGTFAMLVPSLGLAIITCLIGLSFFFL 286
             D    + A ++   L  +   +M IAF+ GT+A +   L + ++T    L F  L
Sbjct:   584 DLSLIMKAFNLALPLLGLALTSMSIAFMAGTYAAVYGLLIVGVLTSSY-LDFLLL 637

 Score = 59 (25.8 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
 Identities = 11/26 (42%), Positives = 20/26 (76%)

Query:     3 ALHLAADRGYVGIVKAIIS--KNLEC 26
             ALH+AA  G++ +V+A++S  K++ C
Sbjct:   168 ALHVAAGAGHLAVVEALVSFIKDISC 193

 Score = 40 (19.1 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
 Identities = 9/20 (45%), Positives = 13/20 (65%)

Query:     2 TALHLAADRGYVGIVKAIIS 21
             T LHLAA  G+  +V  I++
Sbjct:   133 TMLHLAAAAGHTDLVCYILN 152


>TAIR|locus:2181768 [details] [associations]
            symbol:ANK1 "ankyrin-like1" species:3702 "Arabidopsis
            thaliana" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 GO:GO:0005783 GO:GO:0016021
            GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
            eggNOG:COG0666 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
            SUPFAM:SSF48403 PROSITE:PS50297 HSSP:Q8TDY4 EMBL:AL162971
            HOGENOM:HOG000234376 ProtClustDB:CLSN2682034 InterPro:IPR026961
            Pfam:PF13962 EMBL:BT015133 EMBL:BT020220 EMBL:AK226242
            IPI:IPI00538488 PIR:T48283 RefSeq:NP_195882.2 UniGene:At.33394
            ProteinModelPortal:Q6AWW5 SMR:Q6AWW5 EnsemblPlants:AT5G02620.1
            GeneID:831855 KEGG:ath:AT5G02620 TAIR:At5g02620 InParanoid:Q6AWW5
            PhylomeDB:Q6AWW5 Genevestigator:Q6AWW5 Uniprot:Q6AWW5
        Length = 524

 Score = 121 (47.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 42/134 (31%), Positives = 60/134 (44%)

Query:     2 TALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVR 61
             TALH AA  G+  IVK +I K       VD +G   LH A+                   
Sbjct:   161 TALHSAARNGHTVIVKKLIEKKAGMVTRVDKKGQTALHMAVKGQNTEIVDVLMEADG--- 217

Query:    62 SLIIEGDVKGNTPLHVLAAVRPDEFDV--RMIRKMQANFDAVNKQNVSVTNIL-LNGYPE 118
             SLI   D KGNTPLH+  AVR +  ++   +++  + +  AVNK   +  +I    G  E
Sbjct:   218 SLINSADNKGNTPLHI--AVRKNRAEIVQTVLKYCEVSRVAVNKSGETALDIAEKTGLHE 275

Query:   119 LKEEIQKLSKDVGR 132
             +   +QK+     R
Sbjct:   276 IVPLLQKIGMQNAR 289

 Score = 70 (29.7 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 35/140 (25%), Positives = 60/140 (42%)

Query:   183 PGGYRSENGTAILRRNTAFQAFIVADSIAMVFSLSAVFTHF-LMALKIEATKDFDEALFA 241
             P GY      A  R    F  F+V DS A+  SL+ V     ++ ++  A K    A+  
Sbjct:   383 PPGYSLGEARAAPRPE--FLIFVVFDSFALFISLAVVVVQTSVVVIERRAKKQM-MAIIN 439

Query:   242 ASIWFTLFSMGAMVIAFVTGTFAML----VP-SLGLAIITCLIGLSFF-FLAFWLIKLSI 295
               +W     +    +AFV+ +F ++     P ++G+  I  LI +S    + +W+I   I
Sbjct:   440 KLMWMACIMIS---VAFVSLSFVVVGEKEKPLAVGVTAIGALIMVSTLGTMCYWVIANRI 496

Query:   296 FLSRTKVIDCSKSPSLFINK 315
               S++        P L  +K
Sbjct:   497 EGSKSSPASMMSDPELADSK 516


>TAIR|locus:2020833 [details] [associations]
            symbol:AT1G03670 "AT1G03670" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
            EMBL:CP002684 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
            SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR027001
            PANTHER:PTHR24177 InterPro:IPR027002 InterPro:IPR026961
            PANTHER:PTHR24177:SF1 Pfam:PF13962 IPI:IPI01019841
            RefSeq:NP_171863.1 UniGene:At.51471 ProteinModelPortal:F4I2G1
            SMR:F4I2G1 EnsemblPlants:AT1G03670.1 GeneID:839438
            KEGG:ath:AT1G03670 OMA:ISMEQAT Uniprot:F4I2G1
        Length = 616

 Score = 140 (54.3 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 73/308 (23%), Positives = 125/308 (40%)

Query:     2 TALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVR 61
             T +H+AA  G+V I+K  +    +  EL++N+  N  H A ++                R
Sbjct:   289 TPIHMAAKEGHVRIIKEFLKHCPDSRELLNNQCQNIFHVAAIAGKSKVVKYLLKLDEGKR 348

Query:    62 SLIIEGDVKGNTPLHVLAAVRPDEFDVRMIRKMQA-NFDAVNKQNVSVTNILLNGYPELK 120
              ++ E D+ GNTPLH LA        V M+      N  A+N +  +  +I         
Sbjct:   349 -MMNEQDINGNTPLH-LATKHRYPIVVNMLTWNDGINLRALNNEGFTALDIAETMKDNNA 406

Query:   121 EEIQKLSKDVGRGQYSDGVIRGPKYL---VGQND-DTKDDYKDTRASHXXXXXXXXXXXX 176
               + K  + +     S G   GP  +   V Q+   + + YKD+  +             
Sbjct:   407 YVLYK--RLIWMALVSAGAPHGPNLIPLTVSQSSKQSPERYKDSVNTLMVTATLVATVTF 464

Query:   177 XXXXXXPGGYRSEN---GTAILRRNTAFQAFIVADSIAMVFSLSAVFTHFLMALKIEATK 233
                   PGGY S     G A L     F+ F++ ++IAM  S+  V    + A   +A  
Sbjct:   465 AAGLTLPGGYMSSAPHLGMAALVNKLNFKVFLLLNNIAMCTSVVTVMA-LIWAQLGDAL- 522

Query:   234 DFDEALFAASIWFTLFSMGAMVIAFVTGTFAMLVPSLG-LAIITCLIGLSFF-FLAFWLI 291
                +  F  ++   L ++ +M++A V G   ++V  L  L+ +   I  +F  FL   +I
Sbjct:   523 -LTKKAFRLALPLLLTAVVSMMMASVAG-LTLVVSDLPWLSHLVLAIDSAFLVFLMLLII 580

Query:   292 KLSIFLSR 299
               +   +R
Sbjct:   581 PYAFSSTR 588

 Score = 41 (19.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query:     2 TALHLAADRGYVGIVKAII 20
             T LH+AA  G + IV+ ++
Sbjct:   108 TTLHVAARAGSLNIVEILV 126


>TAIR|locus:2026489 [details] [associations]
            symbol:AT1G07710 "AT1G07710" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110 Pfam:PF00023
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002684
            GenomeReviews:CT485782_GR eggNOG:COG0666 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            HSSP:Q60778 EMBL:AC007583 HOGENOM:HOG000234376
            ProtClustDB:CLSN2682034 InterPro:IPR026961 Pfam:PF13962
            IPI:IPI00542344 PIR:C86212 RefSeq:NP_172250.1 UniGene:At.51520
            ProteinModelPortal:Q9LQP7 SMR:Q9LQP7 PaxDb:Q9LQP7 PRIDE:Q9LQP7
            EnsemblPlants:AT1G07710.1 GeneID:837285 KEGG:ath:AT1G07710
            TAIR:At1g07710 InParanoid:Q9LQP7 OMA:KAKKQMM PhylomeDB:Q9LQP7
            Genevestigator:Q9LQP7 Uniprot:Q9LQP7
        Length = 543

 Score = 103 (41.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
 Identities = 34/125 (27%), Positives = 54/125 (43%)

Query:     2 TALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVR 61
             TALH A+  G+V ++KA+++        +D +G   LH A+    V             R
Sbjct:   171 TALHSASRNGHVKVIKALLASEPAIAIRMDKKGQTALHMAVKGTNVEVVEELIKAD---R 227

Query:    62 SLIIEGDVKGNTPLHVLAAVRPDEFDVRMIRKMQANFDAVNKQNVSVTNILLN-GYPELK 120
             S I   D KGNT LH+ A     +    ++     +  AVN+   +  +     G PE+ 
Sbjct:   228 SSINIADTKGNTALHIAARKGRSQIVKLLLANNMTDTKAVNRSGETALDTAEKIGNPEVA 287

Query:   121 EEIQK 125
               +QK
Sbjct:   288 LILQK 292

 Score = 76 (31.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
 Identities = 29/113 (25%), Positives = 53/113 (46%)

Query:   191 GTAILRRNTAFQAFIVADSIAMVFSLSAVFTHF-LMALKIEATKDFDEALFAASIWFT-- 247
             G A +   T F  F + DSIA+  SL+ V     ++ ++ +A K    A+    +W    
Sbjct:   395 GEANIASTTPFIIFFIFDSIALFISLAVVVVQTSVVVIESKAKKQM-MAVINKLMWLACV 453

Query:   248 LFSMGAMVIAFVT-GT----FAMLVPSLGLAIITCLIGLSFFFLAFWLIKLSI 295
             L S+  + ++FV  G      A+ V ++G  I+   +G     + +W+I+  I
Sbjct:   454 LISVAFLALSFVVVGEEEKWLAIWVTAIGATIMITTLGT----MCYWIIQHKI 502


>TAIR|locus:2075009 [details] [associations]
            symbol:AT3G09550 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009827 "plant-type cell wall
            modification" evidence=RCA] [GO:0009860 "pollen tube growth"
            evidence=RCA] InterPro:IPR002110 Pfam:PF13606 PROSITE:PS50088
            SMART:SM00248 EMBL:CP002686 Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR027001
            PANTHER:PTHR24177 InterPro:IPR027002 InterPro:IPR026961
            PANTHER:PTHR24177:SF1 Pfam:PF13962 IPI:IPI00524698
            RefSeq:NP_187566.4 UniGene:At.40085 ProteinModelPortal:F4J181
            SMR:F4J181 PRIDE:F4J181 EnsemblPlants:AT3G09550.1 GeneID:820112
            KEGG:ath:AT3G09550 OMA:TKTERRV Uniprot:F4J181
        Length = 607

 Score = 100 (40.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
 Identities = 32/131 (24%), Positives = 60/131 (45%)

Query:     3 ALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVRS 62
             ALHLAA +G+V IV+ ++ K+ +     D +G   LH A+               P   +
Sbjct:   249 ALHLAARQGHVDIVRTLLDKDPQLARRTDKKGQTSLHMAVKGVSSQVVRLLLRADP---A 305

Query:    63 LIIEGDVKGNTPLHVLAAVRPDEFDVRMIRKMQANFDAVNKQNVSVTNILLNGYPELKE- 121
             +++  D  GNT LH+    +  E    +++    N +A+ + + +  +I   G    +E 
Sbjct:   306 IVMLPDKFGNTVLHIATRKKRAEIVNELLQLPDTNVNALTRDHKTAYDIA-EGLTHSEET 364

Query:   122 -EIQKLSKDVG 131
              EI+++    G
Sbjct:   365 AEIKEILSRCG 375

 Score = 72 (30.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
 Identities = 24/111 (21%), Positives = 55/111 (49%)

Query:   183 PGGYRSENGTAILRRNTAFQAFIVADSIAMVFSLSAVFTHFLMA---LKIE--ATKDFDE 237
             PGG   ++G A++   T+F+ F + ++IA+  SL+ V     +     K E    +  ++
Sbjct:   455 PGG-DDDHGVAVMVHATSFKIFFIFNAIALFTSLAVVVVQITLVRGETKTERRVVEVINK 513

Query:   238 ALFAASIWFTL--FSMGAMVIAFVTGTFAMLVPSLGLAIITCLIGLSFFFL 286
              ++ AS+  T+   S   +V+       A++V  +G   +T ++ +  +++
Sbjct:   514 LMWLASVCTTVAFISSSYIVVGRRNRYAAVVVTVIGTVTMTGILSIMTYYV 564


>TAIR|locus:2092522 [details] [associations]
            symbol:ITN1 "INCREASED TOLERANCE TO NACL" species:3702
            "Arabidopsis thaliana" [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0009651 "response to salt stress" evidence=IMP] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IPI]
            [GO:0034613 "cellular protein localization" evidence=IDA]
            InterPro:IPR002110 Pfam:PF00023 PROSITE:PS50088 SMART:SM00248
            GO:GO:0016021 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0034613 eggNOG:COG0666
            GO:GO:0009651 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
            SUPFAM:SSF48403 PROSITE:PS50297 HSSP:Q60778 EMBL:AP002047
            EMBL:AC069474 InterPro:IPR027001 PANTHER:PTHR24177
            HOGENOM:HOG000234376 ProtClustDB:CLSN2682034 InterPro:IPR027002
            InterPro:IPR026961 PANTHER:PTHR24177:SF1 Pfam:PF13962 EMBL:AY085485
            IPI:IPI00547781 RefSeq:NP_187842.1 UniGene:At.39610
            ProteinModelPortal:Q9C7A2 SMR:Q9C7A2 STRING:Q9C7A2 PRIDE:Q9C7A2
            EnsemblPlants:AT3G12360.1 GeneID:820414 KEGG:ath:AT3G12360
            TAIR:At3g12360 InParanoid:Q9C7A2 OMA:RANDLNQ PhylomeDB:Q9C7A2
            Genevestigator:Q9C7A2 Uniprot:Q9C7A2
        Length = 590

 Score = 111 (44.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
 Identities = 33/130 (25%), Positives = 61/130 (46%)

Query:     3 ALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVRS 62
             ALHLAA +G+V ++KA++SK+ +    +D +G   LH A+               P   +
Sbjct:   235 ALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADP---A 291

Query:    63 LIIEGDVKGNTPLHVLAAVRPDEFDVRMIRKMQANFDAVNKQNVSVTNILLNGYPELKEE 122
             ++++ D   NT LHV    +  E    ++     N + + + + +  +I   G P L EE
Sbjct:   292 IVMQPDKSCNTALHVATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIA-EGLP-LSEE 349

Query:   123 IQKLSKDVGR 132
                + + + R
Sbjct:   350 SSYIKECLAR 359

 Score = 59 (25.8 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
 Identities = 22/85 (25%), Positives = 45/85 (52%)

Query:   183 PGGYRSENGTAILRRNTAFQAFIVADSIAMVFSLSAVFTHF-LMALKIEATKDFDEALFA 241
             PGG  ++ G+A++    +F+ F + +++A+  SL+ V     L+  + +A K   E +  
Sbjct:   441 PGGDNND-GSAVVVGRASFKIFFIFNALALFTSLAVVVVQITLVRGETKAEKRVVEVINK 499

Query:   242 ASIWFTLFSMGAMVIAFVTGTFAML 266
               +W  L SM   V AF+  ++ ++
Sbjct:   500 L-MW--LASMCTSV-AFLASSYIVV 520


>TAIR|locus:2129685 [details] [associations]
            symbol:AT4G14390 "AT4G14390" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002110 PROSITE:PS50088 SMART:SM00248
            EMBL:CP002687 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
            SUPFAM:SSF48403 PROSITE:PS50297 InterPro:IPR026961 Pfam:PF13962
            IPI:IPI00517064 RefSeq:NP_193175.2 UniGene:At.54317
            ProteinModelPortal:F4JVF4 SMR:F4JVF4 PRIDE:F4JVF4
            EnsemblPlants:AT4G14390.1 GeneID:827084 KEGG:ath:AT4G14390
            Uniprot:F4JVF4
        Length = 694

 Score = 93 (37.8 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
 Identities = 33/123 (26%), Positives = 57/123 (46%)

Query:   183 PGGYRSEN---GTAILRRNTAFQAFIVADSIAMVFSLSAVFTHFLMALKIEATKDFDEAL 239
             PGG+ S     G A L  N     F+V D +AM  S++ +    L+  ++        +L
Sbjct:   541 PGGFNSSAPHLGRATLATNPTLFIFLVLDILAMQSSVATI--GILIWAQLGDPVLIRSSL 598

Query:   240 FAASIWFTLFSMGAMVIAFVTGTFAMLVPSLGLAIITCLIGLSFFFLAFWLIKLSIFLSR 299
               A +   LF++  M +AF+ G    +     L +I C+I + FF  A +++   + L R
Sbjct:   599 HVA-LPLLLFALLCMPLAFLFGVVTAVGHVKWLVVIICIISVLFFSWAIFVLGPHVMLQR 657

Query:   300 TKV 302
             + V
Sbjct:   658 SYV 660

 Score = 79 (32.9 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
 Identities = 23/76 (30%), Positives = 36/76 (47%)

Query:     4 LHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVS--FYVXXXXXXXXXXPLVR 61
             +H AA++G+  IV+  I +      L++  G N LH A  +  F++              
Sbjct:   363 IHTAAEKGHENIVEEFIKRCPGSKHLLNKLGQNVLHIAAKNGKFWISNMLIINKDT---E 419

Query:    62 SLIIEGDVKGNTPLHV 77
              L +  DV GNTPLH+
Sbjct:   420 HLGVGQDVDGNTPLHL 435


>TAIR|locus:2045233 [details] [associations]
            symbol:AT2G31820 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002110
            Pfam:PF13606 PROSITE:PS50088 SMART:SM00248 GO:GO:0005886
            EMBL:CP002685 GenomeReviews:CT485783_GR eggNOG:COG0666
            Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
            PROSITE:PS50297 HSSP:Q60778 EMBL:AC006533 HOGENOM:HOG000234376
            ProtClustDB:CLSN2682034 InterPro:IPR026961 Pfam:PF13962
            IPI:IPI00530763 PIR:E84725 RefSeq:NP_180741.1 UniGene:At.38167
            ProteinModelPortal:Q9SKB8 SMR:Q9SKB8 PRIDE:Q9SKB8
            EnsemblPlants:AT2G31820.1 GeneID:817739 KEGG:ath:AT2G31820
            TAIR:At2g31820 InParanoid:Q9SKB8 OMA:TTDLSCT PhylomeDB:Q9SKB8
            ArrayExpress:Q9SKB8 Genevestigator:Q9SKB8 Uniprot:Q9SKB8
        Length = 662

 Score = 109 (43.4 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
 Identities = 44/140 (31%), Positives = 63/140 (45%)

Query:     2 TALHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVR 61
             TALH AA  G+V +VK++I K+       D +G   LH A+               P V 
Sbjct:   294 TALHSAARMGHVEVVKSLIGKDPSIGFRTDKKGQTALHMAVKG--QNDGIVVELVKPDVA 351

Query:    62 SLIIEGDVKGNTPLHVLAAVRPDEFD-VRMIRKMQA-NFDAVNKQN---VSVTNILLNG- 115
              L +E D KGNTPLH+  A        VR +   +  N + +NK     + V+  + N  
Sbjct:   352 VLSVE-DNKGNTPLHI--ATNKGRIKIVRCLVSFEGINLNPINKAGDTPLDVSEKIGNAE 408

Query:   116 -YPELKEEIQKLSKDVGRGQ 134
                 LKE     +KD+G+ Q
Sbjct:   409 LVSVLKEAGAATAKDLGKPQ 428

 Score = 59 (25.8 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
 Identities = 33/147 (22%), Positives = 66/147 (44%)

Query:   183 PGGY---RSEN---GTAILRRNTAFQAFIVADSIAMVFSLSAVFTHF-LMALKIEATKDF 235
             PG Y   RS+    G A +     F  F + DS+A+  SL+ V     ++ ++ +A K  
Sbjct:   500 PGQYEEDRSKGELLGQAHIANKAPFLVFFIFDSLALFISLAVVVVQTSVVVIEQKAKKKL 559

Query:   236 ----DEALFAASIWFTL--FSMGAMVIAFVTGTFAMLVPSLGLAIITCLIGLSFFFLAFW 289
                 ++ ++ A ++ ++   S+  +V+       A+    +G  I+   IG   + +   
Sbjct:   560 VFVINKLMWCACLFISIAFVSLSYIVVGKEEMWLAVCATVIGGTIMLTTIGAMCYCVVMH 619

Query:   290 LIKLSIFLSRTKVIDCSKSPSLFINKM 316
              ++ S   S  K  + SKS S  +++M
Sbjct:   620 RMEESKLRSIRK--ERSKSQSFSMSRM 644


>TAIR|locus:2129690 [details] [associations]
            symbol:ACD6 "AT4G14400" species:3702 "Arabidopsis
            thaliana" [GO:0008219 "cell death" evidence=IMP] [GO:0009751
            "response to salicylic acid stimulus" evidence=IMP] [GO:0009816
            "defense response to bacterium, incompatible interaction"
            evidence=IMP] [GO:0016020 "membrane" evidence=ISS;IDA] [GO:0009615
            "response to virus" evidence=IEP] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002687 GO:GO:0016020
            GO:GO:0008219 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
            SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0009751 GO:GO:0009615
            GO:GO:0009816 InterPro:IPR026961 Pfam:PF13962 UniGene:At.54317
            EMBL:AY094416 EMBL:BT002281 EMBL:AY344843 EMBL:AK176809
            IPI:IPI00520628 RefSeq:NP_567430.1 UniGene:At.23891
            ProteinModelPortal:Q8LPS2 SMR:Q8LPS2 STRING:Q8LPS2 PRIDE:Q8LPS2
            DNASU:827085 EnsemblPlants:AT4G14400.1 GeneID:827085
            KEGG:ath:AT4G14400 TAIR:At4g14400 InParanoid:Q8LPS2
            PhylomeDB:Q8LPS2 ProtClustDB:CLSN2689428 Genevestigator:Q8LPS2
            Uniprot:Q8LPS2
        Length = 670

 Score = 89 (36.4 bits), Expect = 0.00083, Sum P(2) = 0.00083
 Identities = 32/123 (26%), Positives = 57/123 (46%)

Query:   183 PGGYRSEN-----GTAILRRNTAFQAFIVADSIAMVFSLSAVFTHFLMALKIEATKDFDE 237
             PGGY S++     G A L  N     F++ D +AM  S++ + T  L+  ++       +
Sbjct:   513 PGGYISDSKKPNLGRATLATNPTLFIFLLFDILAMQSSVATICT--LIWAQLGDLALILK 570

Query:   238 ALFAASIWFTLFSMGAMVIAFVTGTFAMLVPSLGLAIITCLIGLSFFFLAFWLIKLSIFL 297
             +L  A +   LFS+  M +AF+ G    +     L +   +I   FF  A +++   + L
Sbjct:   571 SLHVA-LPLLLFSLLCMPVAFLFGVITAIAHVKWLLVTISIISGGFFLFAIFILGPHVML 629

Query:   298 SRT 300
              R+
Sbjct:   630 QRS 632

 Score = 71 (30.1 bits), Expect = 0.00083, Sum P(2) = 0.00083
 Identities = 25/84 (29%), Positives = 36/84 (42%)

Query:     4 LHLAADRGYVGIVKAIISKNLECYELVDNRGWNFLHYAMVSFYVXXXXXXXXXXPLVRSL 63
             +H AA   +  I+K  I +      L++  G N LH A  +                + L
Sbjct:   334 IHSAAKNEHYEIIKEFIKRCPASKYLLNRLGQNILHVAAKN-EASLTAYMLMHDKDTKHL 392

Query:    64 IIEGDVKGNTPLHVLAAVRPDEFD 87
              +  DV GNTPLH+  AV   +FD
Sbjct:   393 GVGQDVDGNTPLHL--AVMNWDFD 414


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.140   0.411    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       298   0.00094  115 3  11 22  0.44    33
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  193 KB (2110 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  23.46u 0.15s 23.61t   Elapsed:  00:00:01
  Total cpu time:  23.46u 0.15s 23.61t   Elapsed:  00:00:01
  Start:  Tue May 21 03:30:44 2013   End:  Tue May 21 03:30:45 2013

Back to top