BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020467
(326 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 18/160 (11%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQ 69
++ KY+ LE VG G Y VYK + S IVALK + +A REI L+ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L + E LV EF+ DL V+ E+K G+ +IK ++ Q
Sbjct: 78 H-PNIVSLIDVIHSE-RCLTLVFEFMEKDLKKVLDENKT--------GLQDSQIKIYLYQ 127
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+L GV CH++ I+HRDLKP NLLI DG LKLADFG AR
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
T V T W+RAP++L GS Y VD+WS+
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 89/160 (55%), Gaps = 18/160 (11%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQ 69
++ KY+ LE VG G Y VYK + S IVALK + +A REI L+ L
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELH 77
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L + E LV EF+ DL V+ E+K +D +IK ++ Q
Sbjct: 78 H-PNIVSLIDVIHSE-RCLTLVFEFMEKDLKKVLDENKTGLQD--------SQIKIYLYQ 127
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+L GV CH++ I+HRDLKP NLLI DG LKLADFG AR
Sbjct: 128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
T V T W+RAP++L GS Y VD+WS+
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGC 208
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
PE + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL KK + GI + IK ++
Sbjct: 66 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYL 116
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 197
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 88/162 (54%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
PE + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 6 PEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 65
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL KK + GI + IK ++
Sbjct: 66 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYL 116
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSL 197
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 95/156 (60%), Gaps = 18/156 (11%)
Query: 21 YEILECVGSGAYSDVYKGR-RLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPN 73
Y L+ +G G Y+ VYKG+ +L+DNL VALKE+ +A RE+ L+ L+++ N
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHA-N 61
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V LH+ E + LV E+L DL K+ +D G+ I++ +K ++ Q+L G
Sbjct: 62 IVTLHDIIHTE-KSLTLVFEYLDKDL-------KQYLDDCGNI-INMHNVKLFLFQLLRG 112
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CHR ++HRDLKP NLLI + G LKLADFG AR
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
Score = 35.4 bits (80), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V T W+R P++L GST Y ++D+W +
Sbjct: 161 VVTLWYRPPDILLGSTDYSTQIDMWGVG 188
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
P + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL T + S GI + IK ++
Sbjct: 62 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDLKTFMDAS-------ALTGIPLPLIKSYL 112
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSL 193
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
P + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL KK + GI + IK ++
Sbjct: 61 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYL 111
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSL 192
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
P + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL KK + GI + IK ++
Sbjct: 61 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYL 111
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSL 192
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
P + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL KK + GI + IK ++
Sbjct: 62 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYL 112
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSL 193
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 87/162 (53%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
P + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 1 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV EFL DL KK + GI + IK ++
Sbjct: 61 L-NHPNIVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYL 111
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSL 192
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSL 189
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 65 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 191
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 65 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSL 191
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSL 190
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 67 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSL 193
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 65 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSL 191
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSL 189
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 67
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 68 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSL 194
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 94/160 (58%), Gaps = 20/160 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----------DYQSAFREIEALQILQ 69
+YE L+ +G G ++ VYK R + N IVA+K++ ++A REI+ LQ L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN++ L + F + + LV +F+ TDL +I ++ ++ IK +M+
Sbjct: 71 H-PNIIGLLDAFGHKS-NISLVFDFMETDLEVIIKDN--------SLVLTPSHIKAYMLM 120
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
L G++ H++ I+HRDLKP NLL+ ++GVLKLADFG A+
Sbjct: 121 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V TRW+RAPELL+G+ YG+ VD+W++ L
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCIL 203
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 67 IVKLLDVIHTENK-LYLVFEFLSMDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 119 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSL 193
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 67
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 68 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 194
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNSP 72
++++ LE +G+G Y+ VYKG + + VALKEV +A REI ++ L++
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHE- 63
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L++ E++ LV EF+ DL + + RG+ + +K + Q+L
Sbjct: 64 NIVRLYDVIHTENK-LTLVFEFMDNDLKKYM---DSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
G+ CH N I+HRDLKP NLLI G LKL DFG AR
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 288 ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+S V T W+RAP++L GS +Y +D+WS L
Sbjct: 164 TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCIL 199
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 65 IVKLLDVIHTENK-LYLVFEFLSMDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSL 191
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 64
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 65 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSL 191
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 84/159 (52%), Gaps = 17/159 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQN 70
+ KYE LE +G G Y V+K + + IVALK V SA REI L+ L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V LH+ D+ LV EF DL KK D + + +K ++ Q+
Sbjct: 61 K-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSFLFQL 110
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
L G+ CH ++HRDLKP NLLI +G LKLADFG AR
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWS 318
V T W+R P++L+G+ Y +D+WS
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWS 187
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VAL ++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VAL ++ +A REI L+ L N PN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL KK + GI + IK ++ Q+L G
Sbjct: 63 IVKLLDVIHTENK-LYLVFEFLHQDL-------KKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 66
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL + S GI + IK ++ Q+L G
Sbjct: 67 IVKLLDVIHTENK-LYLVFEFLSMDLKDFMDAS-------ALTGIPLPLIKSYLFQLLQG 118
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSL 193
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 65
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL + S GI + IK ++ Q+L G
Sbjct: 66 IVKLLDVIHTENK-LYLVFEFLSMDLKDFMDAS-------ALTGIPLPLIKSYLFQLLQG 117
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSL 192
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 29/182 (15%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
++KYE L +G G + +V+K R VALK+V +A REI+ LQ+L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 71 SPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
NVV L E + R LV +F DLA +++ K ++ EI
Sbjct: 77 E-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEI 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNS 183
KR M +L+G+ HRN I+HRD+K N+LI DGVLKLADFG AR + NS
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF------SLAKNS 181
Query: 184 QP 185
QP
Sbjct: 182 QP 183
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLW 317
V T W+R PELL G YG +DLW
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLW 214
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 29/182 (15%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
++KYE L +G G + +V+K R VALK+V +A REI+ LQ+L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 71 SPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
NVV L E + R LV +F DLA +++ K ++ EI
Sbjct: 77 E-NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK--------FTLSEI 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNS 183
KR M +L+G+ HRN I+HRD+K N+LI DGVLKLADFG AR + NS
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF------SLAKNS 181
Query: 184 QP 185
QP
Sbjct: 182 QP 183
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLW 317
V T W+R PELL G YG +DLW
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLW 214
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 63
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV EFL DL + S GI + IK ++ Q+L G
Sbjct: 64 IVKLLDVIHTENK-LYLVFEFLHQDLKDFMDAS-------ALTGIPLPLIKSYLFQLLQG 115
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 116 LAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
V T W+RAPE+L G Y VD+WSL
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSL 190
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 29/182 (15%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
++KYE L +G G + +V+K R VALK+V +A REI+ LQ+L++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 71 SPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
NVV L E + R LV +F DLA +++ K ++ EI
Sbjct: 76 E-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEI 126
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNS 183
KR M +L+G+ HRN I+HRD+K N+LI DGVLKLADFG AR + NS
Sbjct: 127 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF------SLAKNS 180
Query: 184 QP 185
QP
Sbjct: 181 QP 182
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLW 317
V T W+R PELL G YG +DLW
Sbjct: 189 VVTLWYRPPELLLGERDYGPPIDLW 213
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 84/159 (52%), Gaps = 17/159 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQN 70
+ KYE LE +G G Y V+K + + IVALK V SA REI L+ L++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V LH+ D+ LV EF DL KK D + + +K ++ Q+
Sbjct: 61 K-NIVRLHDVL-HSDKKLTLVFEFCDQDL--------KKYFDSCNGDLDPEIVKSFLFQL 110
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
L G+ CH ++HRDLKP NLLI +G LKLA+FG AR
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
Score = 34.3 bits (77), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWS 318
V T W+R P++L+G+ Y +D+WS
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWS 187
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 29/182 (15%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
++KYE L +G G + +V+K R VALK+V +A REI+ LQ+L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 71 SPNVVVLHEY-------FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
NVV L E + R LV +F DLA +++ K ++ EI
Sbjct: 77 E-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--------FTLSEI 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNS 183
KR M +L+G+ HRN I+HRD+K N+LI DGVLKLADFG AR + NS
Sbjct: 128 KRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAF------SLAKNS 181
Query: 184 QP 185
QP
Sbjct: 182 QP 183
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLW 317
V T W+R PELL G YG +DLW
Sbjct: 190 VVTLWYRPPELLLGERDYGPPIDLW 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 16/156 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
++ +E +G G Y VYK R +VALK++ +A REI L+ L N PN
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPN 62
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L + E++ LV E + DL T + S GI + IK ++ Q+L G
Sbjct: 63 IVKLLDVIHTENK-LYLVFEHVHQDLKTFMDAS-------ALTGIPLPLIKSYLFQLLQG 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
T V T W+RAPE+L G Y VD+WSL
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSL 189
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQI 67
P + ++ +E +G G Y VYK R +VALK++ +A REI L+
Sbjct: 2 PGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
L N PN+V L + E++ LV E + DL KK + GI + IK ++
Sbjct: 62 L-NHPNIVKLLDVIHTENK-LYLVFEHVDQDL-------KKFMDASALTGIPLPLIKSYL 112
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ CH + ++HRDLKP NLLI +G +KLADFG AR
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V T W+RAPE+L G Y VD+WSL
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLG 194
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 17/164 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS-------AFREIEALQILQ 69
++ KYE + +G G+Y V+K R IVA+K+ + + A REI L+ L+
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L E F R LV E+ TV+ E DR RG+ +K Q
Sbjct: 61 H-PNLVNLLEVF-RRKRRLHLVFEYCD---HTVLHEL-----DRYQRGVPEHLVKSITWQ 110
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
L V+ CH++ +HRD+KP N+LI V+KL DFG AR+L G
Sbjct: 111 TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTG 154
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
V TRW+R+PELL G T YG VD+W++
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGC 191
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQ-- 69
++YE + +G GAY VYK R VALK V S RE+ L+ L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 70 NSPNVVVLHEYFWREDED----AVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
PNVV L + D LV E + DL T + ++ G+ IK
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP-------GLPAETIKD 116
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
M Q L G+D H N IVHRDLKP N+L+ G +KLADFG ARI
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 206 VEDASPEGDVNQEQGIMSREDYFRALDELKAKNSIDETDKDTHVHDGDTSCFATCTTSDV 265
++ A P G + + R+ + R LD L A + K ++ + T +
Sbjct: 101 LDKAPPPGLPAETIKDLMRQ-FLRGLDFLHANCIVHRDLKPENI------LVTSGGTVKL 153
Query: 266 EDDLFKGTYSYDAEDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
D YSY Q AL V T W+RAPE+L ST Y VD+WS+
Sbjct: 154 ADFGLARIYSY---------QMALDPVVVTLWYRAPEVLLQST-YATPVDMWSV 197
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQ-- 69
++YE + +G GAY VYK R VALK V S RE+ L+ L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 70 NSPNVVVLHEYFWREDED----AVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
PNVV L + D LV E + DL T + ++ G+ IK
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP-------GLPAETIKD 116
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
M Q L G+D H N IVHRDLKP N+L+ G +KLADFG ARI
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 206 VEDASPEGDVNQEQGIMSREDYFRALDELKAKNSIDETDKDTHVHDGDTSCFATCTTSDV 265
++ A P G + + R+ + R LD L A + K ++ + T +
Sbjct: 101 LDKAPPPGLPAETIKDLMRQ-FLRGLDFLHANCIVHRDLKPENI------LVTSGGTVKL 153
Query: 266 EDDLFKGTYSYDAEDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
D YSY Q AL V T W+RAPE+L ST Y VD+WS+
Sbjct: 154 ADFGLARIYSY---------QMALAPVVVTLWYRAPEVLLQST-YATPVDMWSV 197
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 79/165 (47%), Gaps = 20/165 (12%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQ-- 69
++YE + +G GAY VYK R VALK V S RE+ L+ L+
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 70 NSPNVVVLHEYFWREDED----AVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
PNVV L + D LV E + DL T + ++ G+ IK
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP-------GLPAETIKD 116
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
M Q L G+D H N IVHRDLKP N+L+ G +KLADFG ARI
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 161
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 17/114 (14%)
Query: 206 VEDASPEGDVNQEQGIMSREDYFRALDELKAKNSIDETDKDTHVHDGDTSCFATCTTSDV 265
++ A P G + + R+ + R LD L A + K ++ + T +
Sbjct: 101 LDKAPPPGLPAETIKDLMRQ-FLRGLDFLHANCIVHRDLKPENI------LVTSGGTVKL 153
Query: 266 EDDLFKGTYSYDAEDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
D YSY Q AL V T W+RAPE+L ST Y VD+WS+
Sbjct: 154 ADFGLARIYSY---------QMALFPVVVTLWYRAPEVLLQST-YATPVDMWSV 197
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 79/168 (47%), Gaps = 23/168 (13%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ----------SAFREIEALQIL 68
++YE + +G GAY VYK R VALK V S RE+ L+ L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 69 Q--NSPNVVVLHEYFWREDED----AVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE 122
+ PNVV L + D LV E + DL T + ++ G+
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPP-------GLPAET 121
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IK M Q L G+D H N IVHRDLKP N+L+ G +KLADFG ARI
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 169
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 17/114 (14%)
Query: 206 VEDASPEGDVNQEQGIMSREDYFRALDELKAKNSIDETDKDTHVHDGDTSCFATCTTSDV 265
++ A P G + + R+ + R LD L A + K ++ + T +
Sbjct: 109 LDKAPPPGLPAETIKDLMRQ-FLRGLDFLHANCIVHRDLKPENI------LVTSGGTVKL 161
Query: 266 EDDLFKGTYSYDAEDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
D YSY Q ALT V T W+RAPE+L ST Y VD+WS+
Sbjct: 162 ADFGLARIYSY---------QMALTPVVVTLWYRAPEVLLQST-YATPVDMWSV 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN-LIVALKEVHDYQ-------SAFREIEALQILQN- 70
+YE + +G GAY V+K R L + VALK V S RE+ L+ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 71 -SPNVVVLHEY--FWREDEDA--VLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
PNVV L + R D + LV E + DL T + + + G+ IK
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-------GVPTETIKD 124
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
M Q+L G+D H + +VHRDLKP N+L+ G +KLADFG ARI
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
Q ALTS V T W+RAPE+L S SY VDLWS+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGC 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN-LIVALKEVHDYQ-------SAFREIEALQILQN- 70
+YE + +G GAY V+K R L + VALK V S RE+ L+ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 71 -SPNVVVLHEY--FWREDEDA--VLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
PNVV L + R D + LV E + DL T + + + G+ IK
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-------GVPTETIKD 124
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
M Q+L G+D H + +VHRDLKP N+L+ G +KLADFG ARI
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
Q ALTS V T W+RAPE+L S SY VDLWS+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGC 207
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 21/165 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN-LIVALKEVHDYQ-------SAFREIEALQILQN- 70
+YE + +G GAY V+K R L + VALK V S RE+ L+ L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 71 -SPNVVVLHEY--FWREDEDA--VLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
PNVV L + R D + LV E + DL T + + + G+ IK
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP-------GVPTETIKD 124
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
M Q+L G+D H + +VHRDLKP N+L+ G +KLADFG ARI
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI 169
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
Q ALTS V T W+RAPE+L S SY VDLWS+
Sbjct: 173 QMALTSVVVTLWYRAPEVLLQS-SYATPVDLWSVGC 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD--------YQSAFREIEALQILQ 69
I Y I E +G G++ V VALK + + REI L++L+
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ P+++ L++ D V+V+E+ +L I E K+ ED G +R+ Q
Sbjct: 68 H-PHIIKLYDVI-TTPTDIVMVIEYAGGELFDYIVEKKRMTEDEG---------RRFFQQ 116
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEFDAPDGNSQPCEP 188
I+ ++ CHR+ IVHRDLKP NLL+ D+ +K+ADFG + I+ GN G+ P
Sbjct: 117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 176
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 177 EV-INGKLYAGPEVDV 191
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
TSC G+ + APE++ G G EVD+WS L
Sbjct: 166 TSC-GSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAF-REIEALQILQ 69
I Y+I++ +G G++ V + VALK ++ D Q REI L++L+
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ P+++ L++ +DE ++V+E+ +L I + K E E +R+ Q
Sbjct: 73 H-PHIIKLYDVIKSKDE-IIMVIEYAGNELFDYIVQRDKMSEQ---------EARRFFQQ 121
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEFDAPDGNSQPCEP 188
I+S V+ CHR+ IVHRDLKP NLL+ + +K+ADFG + I+ GN G+ P
Sbjct: 122 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 181
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 182 EV-ISGKLYAGPEVDV 196
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
TSC G+ + APE++ G G EVD+WS L
Sbjct: 171 TSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAF-REIEALQILQ 69
I Y+I++ +G G++ V + VALK ++ D Q REI L++L+
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ P+++ L++ +DE ++V+E+ +L I + K E E +R+ Q
Sbjct: 72 H-PHIIKLYDVIKSKDE-IIMVIEYAGNELFDYIVQRDKMSEQ---------EARRFFQQ 120
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEFDAPDGNSQPCEP 188
I+S V+ CHR+ IVHRDLKP NLL+ + +K+ADFG + I+ GN G+ P
Sbjct: 121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 180
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 181 EV-ISGKLYAGPEVDV 195
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
TSC G+ + APE++ G G EVD+WS L
Sbjct: 170 TSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAF-REIEALQILQ 69
I Y+I++ +G G++ V + VALK ++ D Q REI L++L+
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ P+++ L++ +DE ++V+E+ +L I + K E E +R+ Q
Sbjct: 67 H-PHIIKLYDVIKSKDE-IIMVIEYAGNELFDYIVQRDKMSEQ---------EARRFFQQ 115
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEFDAPDGNSQPCEP 188
I+S V+ CHR+ IVHRDLKP NLL+ + +K+ADFG + I+ GN G+ P
Sbjct: 116 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 175
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 176 EV-ISGKLYAGPEVDV 190
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
TSC G+ + APE++ G G EVD+WS L
Sbjct: 165 TSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 21/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAF-REIEALQILQ 69
I Y+I++ +G G++ V + VALK ++ D Q REI L++L+
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ P+++ L++ +DE ++V+E+ +L I + K E E +R+ Q
Sbjct: 63 H-PHIIKLYDVIKSKDE-IIMVIEYAGNELFDYIVQRDKMSEQ---------EARRFFQQ 111
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEFDAPDGNSQPCEP 188
I+S V+ CHR+ IVHRDLKP NLL+ + +K+ADFG + I+ GN G+ P
Sbjct: 112 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAP 171
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 172 EV-ISGKLYAGPEVDV 186
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
TSC G+ + APE++ G G EVD+WS L
Sbjct: 161 TSC-GSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 20/171 (11%)
Query: 14 RPEI----IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY--------QSAFRE 61
RP++ +A + I + +G G +S+VY+ L D + VALK+V + +E
Sbjct: 23 RPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKE 82
Query: 62 IEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISV 120
I+ L+ L N PNV+ + F ED + +VLE DL+ +I KK++ R I
Sbjct: 83 IDLLKQL-NHPNVIKYYASFI-EDNELNIVLELADAGDLSRMIKHFKKQK-----RLIPE 135
Query: 121 GEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ ++ VQ+ S ++ H ++HRD+KP N+ I GV+KL D G R
Sbjct: 136 RTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
+ KY LE +G G Y VYK + + ALK++ + + REI L+ L++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
S N+V L++ + VLV E L DL KK D + G+ K +++Q+
Sbjct: 60 S-NIVKLYDVI-HTKKRLVLVFEHLDQDL--------KKLLDVCEGGLESVTAKSFLLQL 109
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
L+G+ CH ++HRDLKP NLLI +G LK+ADFG AR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLA 320
T V T W+RAP++L GS Y +D+WS+
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
+ KY LE +G G Y VYK + + ALK++ + + REI L+ L++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
S N+V L++ + VLV E L DL KK D + G+ K +++Q+
Sbjct: 60 S-NIVKLYDVI-HTKKRLVLVFEHLDQDL--------KKLLDVCEGGLESVTAKSFLLQL 109
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
L+G+ CH ++HRDLKP NLLI +G LK+ADFG AR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLA 320
T + T W+RAP++L GS Y +D+WS+
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 85/159 (53%), Gaps = 18/159 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQN 70
+ KY LE +G G Y VYK + + ALK++ + + REI L+ L++
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
S N+V L++ + VLV E L DL KK D + G+ K +++Q+
Sbjct: 60 S-NIVKLYDVI-HTKKRLVLVFEHLDQDL--------KKLLDVCEGGLESVTAKSFLLQL 109
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
L+G+ CH ++HRDLKP NLLI +G LK+ADFG AR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLAR 148
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLA 320
T V T W+RAP++L GS Y +D+WS+
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 88/163 (53%), Gaps = 20/163 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQNSP--N 73
+YEI+E +G+GAY V RR VA+K++ + +A R + L+IL++ N
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 74 VVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
++ + + + E + +VL+ + +DL +I S+ +++ ++ ++
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP---------LTLEHVRYFLY 166
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
Q+L G+ H ++HRDLKP NLL+ ++ LK+ DFG AR L
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q +T V TRW+RAPEL+ Y +DLWS+
Sbjct: 217 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 250
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQNSP--N 73
+YEI+E +G+GAY V RR VA+K++ + +A R + L+IL++ N
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 74 VVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
++ + + + E + +VL+ + +DL +I S+ +++ ++ ++
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQP---------LTLEHVRYFLY 165
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+L G+ H ++HRDLKP NLL+ ++ LK+ DFG AR
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR 206
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q +T V TRW+RAPEL+ Y +DLWS+
Sbjct: 216 QYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSV 249
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD-------YQSAFREIEALQILQN 70
+ KYE L VG G+Y V K R IVA+K+ + + A REI+ L+ L++
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V L E ++ + LV EF+ + + + G+ +++++ QI
Sbjct: 84 E-NLVNLLE-VCKKKKRWYLVFEFVDHTILDDL--------ELFPNGLDYQVVQKYLFQI 133
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
++G+ CH + I+HRD+KP N+L+ GV+KL DFG AR L
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL 174
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
V TRW+RAPELL G YG VD+W++
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGC 213
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ +++L N
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-N 71
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV+E+ ++A + K + E +
Sbjct: 72 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK----------EARAKFR 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ DA G
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 188 PNAPYQDNMSEAPQVDL 204
P +Q + P+VD+
Sbjct: 181 PEL-FQGKKYDGPEVDV 196
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G + APEL G G EVD+WSL L
Sbjct: 169 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 99/199 (49%), Gaps = 22/199 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY--------QSAFREIEALQILQNSP 72
YE+L +G+G+Y K RR SD I+ KE+ DY Q E+ L+ L++ P
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKH-P 65
Query: 73 NVVVLHEYFW-REDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V ++ R + +V+E+ DLA+VI + K+R+ + + R M Q+
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL-----RVMTQL 120
Query: 131 LSGVDACHR-----NTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQP 185
+ CHR +T++HRDLKP N+ + +KL DFG ARIL +E A + P
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTP 180
Query: 186 CEPNAPYQDNMSEAPQVDL 204
+ + MS + D+
Sbjct: 181 YYMSPEQMNRMSYNEKSDI 199
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ +++L N
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-N 71
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV+E+ ++A + K + E +
Sbjct: 72 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK----------EARAKFR 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ D G S P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYA 179
Query: 188 PNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 180 APELFQGKKYDGPEVDV 196
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G+ + APEL G G EVD+WSL L
Sbjct: 169 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ +++L N
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-N 71
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV+E+ ++A + K + E +
Sbjct: 72 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK----------EARAKFR 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ D G S P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYA 179
Query: 188 PNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 180 APELFQGKKYDGPEVDV 196
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G+ + APEL G G EVD+WSL L
Sbjct: 169 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY--------QSAFREIEALQILQNSP 72
YE+L +G+G+Y K RR SD I+ KE+ DY Q E+ L+ L++ P
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKH-P 65
Query: 73 NVVVLHEYFW-REDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V ++ R + +V+E+ DLA+VI + K+R+ + + R M Q+
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL-----RVMTQL 120
Query: 131 LSGVDACHR-----NTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ CHR +T++HRDLKP N+ + +KL DFG ARIL
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 22/166 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY--------QSAFREIEALQILQNSP 72
YE+L +G+G+Y K RR SD I+ KE+ DY Q E+ L+ L++ P
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKEL-DYGSMTEAEKQMLVSEVNLLRELKH-P 65
Query: 73 NVVVLHEYFW-REDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V ++ R + +V+E+ DLA+VI + K+R+ + + R M Q+
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVL-----RVMTQL 120
Query: 131 LSGVDACHR-----NTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ CHR +T++HRDLKP N+ + +KL DFG ARIL
Sbjct: 121 TLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA++ + Q FRE+ +++L N
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL-N 71
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV+E+ ++A + K + E +
Sbjct: 72 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK----------EARAKFR 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ D G S P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPYA 179
Query: 188 PNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 180 APELFQGKKYDGPEVDV 196
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G+ + APEL G G EVD+WSL L
Sbjct: 169 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ ++IL N
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-N 72
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + L++E+ ++A + K + E +
Sbjct: 73 HPNIVKLFEVIETE-KTLYLIMEYASGGEVFDYLVAHGRMKEK----------EARSKFR 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + +G + DA G
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAA 181
Query: 188 PNAPYQDNMSEAPQVDL 204
P +Q + P+VD+
Sbjct: 182 PEL-FQGKKYDGPEVDV 197
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G L + G + APEL G G EVD+WSL L
Sbjct: 168 GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 90/197 (45%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ ++L N
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVL-N 71
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV E+ ++A + K + E +
Sbjct: 72 HPNIVKLFEVIETE-KTLYLVXEYASGGEVFDYLVAHGRXKEK----------EARAKFR 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ DA G
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAA 180
Query: 188 PNAPYQDNMSEAPQVDL 204
P +Q + P+VD+
Sbjct: 181 PEL-FQGKKYDGPEVDV 196
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 18/35 (51%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G + APEL G G EVD+WSL L
Sbjct: 169 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA++ + Q FRE+ +++L N
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL-N 71
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV+E+ ++A + K + E +
Sbjct: 72 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK----------EARAKFR 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ D G S P
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCG-SPPYA 179
Query: 188 PNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 180 APELFQGKKYDGPEVDV 196
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 294 GTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G+ + APEL G G EVD+WSL L
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ ++IL N
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-N 69
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + L++E+ ++A + K + E +
Sbjct: 70 HPNIVKLFEVIETE-KTLYLIMEYASGGEVFDYLVAHGRMKEK----------EARSKFR 118
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + +G + D G S P
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCG-SPPYA 177
Query: 188 PNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 178 APELFQGKKYDGPEVDV 194
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G L + G+ + APEL G G EVD+WSL L
Sbjct: 165 GKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y +L+ +G G ++ V R + VA+K + Q FRE+ +++L N
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-N 64
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAES-KKKREDRGDRGISVGEIKRWM 127
PN+V L E E + LV+E+ ++A K++E R
Sbjct: 65 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK-----------F 112
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPC 186
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + GN+ D G S P
Sbjct: 113 RQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCG-SPPY 171
Query: 187 EPNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 172 AAPELFQGKKYDGPEVDV 189
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G+ + APEL G G EVD+WSL L
Sbjct: 162 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 23/197 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIEALQILQN 70
I Y + + +G G ++ V R + VA+K + Q FRE+ ++IL N
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKIL-N 72
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMV 128
PN+V L E E + LV+E+ ++A + K + E +
Sbjct: 73 HPNIVKLFEVIETE-KTLYLVMEYASGGEVFDYLVAHGRMKEK----------EARAKFR 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR-ILLGNEFDAPDGNSQPCE 187
QI+S V CH+ IVHRDLK NLL+ D +K+ADFG + +GN+ D G S P
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCG-SPPYA 180
Query: 188 PNAPYQDNMSEAPQVDL 204
+Q + P+VD+
Sbjct: 181 APELFQGKKYDGPEVDV 197
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L + G+ + APEL G G EVD+WSL L
Sbjct: 170 LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQS------AFREIEALQIL 68
E+ A Y L+ VGSGAY V VA+K+++ +QS A+RE+ L+ +
Sbjct: 22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM 81
Query: 69 QNSPNVVVLHEYFWREDE-----DAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F ++ D LV+ F+ TDL ++ + +K EDR I
Sbjct: 82 RHE-NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-KHEKLGEDR---------I 130
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + Q+L G+ H I+HRDLKPGNL + +D LK+ DFG AR
Sbjct: 131 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR 176
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G RQ + V TRW+RAPE++ Y VD+WS+ +
Sbjct: 171 DFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIM 216
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 89/178 (50%), Gaps = 25/178 (14%)
Query: 6 PKSWSIHTRPEI--IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV---HDYQ---- 56
P S S+ P I +Y + +G G Y +VYK N VA+K + H+ +
Sbjct: 19 PGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG 78
Query: 57 SAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDR 116
+A RE+ L+ LQ+ N++ L + L+ E+ DL KK D+ +
Sbjct: 79 TAIREVSLLKELQHR-NIIELKSVI-HHNHRLHLIFEYAENDL--------KKYMDK-NP 127
Query: 117 GISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI-----GDDGVLKLADFGQAR 169
+S+ IK ++ Q+++GV+ CH +HRDLKP NLL+ + VLK+ DFG AR
Sbjct: 128 DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLA 320
T + T W+R PE+L GS Y VD+WS+A
Sbjct: 194 FTHEIITLWYRPPEILLGSRHYSTSVDIWSIA 225
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 91/161 (56%), Gaps = 12/161 (7%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEY 80
Y + +G+G++ V++ + + + + K + D + RE++ ++I+++ PNVV L +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKH-PNVVDLKAF 100
Query: 81 FW----REDEDAV-LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
F+ ++DE + LVLE++ TV S+ + + + + + IK +M Q+L +
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVP---ETVYRASRHYAKLK--QTMPMLLIKLYMYQLLRSLA 155
Query: 136 ACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
H I HRD+KP NLL+ GVLKL DFG A+IL+ E
Sbjct: 156 YIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWS 318
S + +R++RAPEL++G+T+Y +D+WS
Sbjct: 199 VSXICSRYYRAPELIFGATNYTTNIDIWS 227
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E +V L D + R + + V +K +M Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 25/169 (14%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------S 57
P+ W++ +EI +G G + +VY R I+ALK + Q
Sbjct: 2 PRQWALE-------DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG 117
RE+E L++ PN++ L+ YF + L+LE+ L TV E +K + R
Sbjct: 55 LRREVEIQSHLRH-PNILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRT 110
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ ++ ++ + + CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 111 AT------YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 82/169 (48%), Gaps = 25/169 (14%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------S 57
P+ W++ +EI +G G + +VY R I+ALK + Q
Sbjct: 2 PRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQ 54
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG 117
RE+E L++ PN++ L+ YF + L+LE+ L TV E +K + R
Sbjct: 55 LRREVEIQSHLRH-PNILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRT 110
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ ++ ++ + + CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 111 AT------YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R + I+ALK + Q RE+E L++ P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 68
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 69 NILRLYGYF-HDSTRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 120 ALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 94
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 95 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 145
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 54 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 111
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 251
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 52 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 109
Query: 73 NVVVLHEYFWR--EDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
N+V L +F+ E +D V LVL+++ + V + R + + V +K +M
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-----ARHYSRAKQTLPVIYVKLYM 164
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
Q+ + H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 165 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 249
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 95 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 152
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 292
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 44 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 101
Query: 73 NVVVLHEYFWR--EDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
N+V L +F+ E +D V LVL+++ + V + R + + V +K +M
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-----ARHYSRAKQTLPVIYVKLYM 156
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
Q+ + H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 157 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 241
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 94
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 95 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 145
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 146 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 50 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 107
Query: 73 NVVVLHEYFWR--EDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
N+V L +F+ E +D V LVL+++ + V + R + + V +K +M
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-----ARHYSRAKQTLPVIYVKLYM 162
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
Q+ + H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 247
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 50 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 107
Query: 73 NVVVLHEYFWR--EDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
N+V L +F+ E +D V LVL+++ + V + R + + V +K +M
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-----ARHYSRAKQTLPVIYVKLYM 162
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
Q+ + H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 163 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 247
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 85
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 86 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 136
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 137 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 69
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 70 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 120
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 74 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 124
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 72 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 122
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 74 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 124
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 72 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 122
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 21 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 78
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 218
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 70
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 71 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 121
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 74 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 124
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 125 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 69
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 70 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 120
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 68
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 69 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 69
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 70 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 120
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 121 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 28 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 85
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 225
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 68
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 69 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 30/171 (17%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS----------------AFREI 62
+ Y + + SG+Y V G S+ + VA+K V + S REI
Sbjct: 22 SPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80
Query: 63 EALQILQNSPNVVVLHEYFWREDEDAV----LVLEFLRTDLATVIAESKKKREDRGDRGI 118
L + PN++ L + F +E A+ LV E +RTDLA VI + + I
Sbjct: 81 RLLNHFHH-PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--------I 131
Query: 119 SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S I+ +M IL G+ H +VHRDL PGN+L+ D+ + + DF AR
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Score = 33.5 bits (75), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 279 EDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWS 318
ED D + T V RW+RAPEL+ + VD+WS
Sbjct: 183 EDTADANK---THYVTHRWYRAPELVMQFKGFTKLVDMWS 219
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 30/171 (17%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS----------------AFREI 62
+ Y + + SG+Y V G S+ + VA+K V + S REI
Sbjct: 22 SPYTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREI 80
Query: 63 EALQILQNSPNVVVLHEYFWREDEDAV----LVLEFLRTDLATVIAESKKKREDRGDRGI 118
L + PN++ L + F +E A+ LV E +RTDLA VI + + I
Sbjct: 81 RLLNHFHH-PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV--------I 131
Query: 119 SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S I+ +M IL G+ H +VHRDL PGN+L+ D+ + + DF AR
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 279 EDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWS 318
ED D + T V RW+RAPEL+ + VD+WS
Sbjct: 183 EDTADANK---THYVTHRWYRAPELVMQFKGFTKLVDMWS 219
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 29 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 86
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 193 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 226
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 72 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 122
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 28 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 85
Query: 73 NVVVLHEYFWR--EDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
N+V L +F+ E +D V LVL+++ + V + R + + V +K +M
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-----ARHYSRAKQTLPVIYVKLYM 140
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
Q+ + H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 141 YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 192 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 225
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 68
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 69 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 67
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 68 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 118
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 119 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 72
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 73 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 123
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 24 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 81
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 185
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 188 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 221
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 68
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 69 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 35 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 92
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 196
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 199 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 232
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 20 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 77
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 181
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 184 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 68
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 69 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 72 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 122
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V + L +A+K++ +QS +RE+ L+ +
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 108 KHE-NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 156
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 202
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y + VD+WS+ +
Sbjct: 208 MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIM 242
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 72 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 122
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 27 VGSGAYSDVYKGRRLSDNLI--VALKEVHDY---QSAFREIEALQILQNSPNVVVLHEYF 81
VG G Y VYK +R ALK++ SA REI L+ L++ PNV+ L + F
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKH-PNVISLQKVF 87
Query: 82 WRE-DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRN 140
D L+ ++ DL +I + + ++ + G +K + QIL G+ H N
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 141 TIVHRDLKPGNLLI----GDDGVLKLADFGQARIL 171
++HRDLKP N+L+ + G +K+AD G AR+
Sbjct: 148 WVLHRDLKPANILVMGEGPERGRVKIADMGFARLF 182
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
L V T W+RAPELL G+ Y +D+W++
Sbjct: 192 LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGC 224
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 4/164 (2%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
RP+ ++ Y + +G+G++ VY+ + +VA+K+V D + RE++ ++ L +
Sbjct: 17 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHC- 74
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 133 GVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 178
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 181 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 65
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 66 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 116
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 117 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
++I +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH-P 72
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K R + ++ ++ +
Sbjct: 73 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSRFDEQRTAT------YITELAN 123
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G +G LK+ADFG
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
++I +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH-P 72
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K R + ++ ++ +
Sbjct: 73 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSRFDEQRTAT------YITELAN 123
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G +G LK+ADFG
Sbjct: 124 ALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF--REIEALQILQNS 71
RP+ ++ Y + +G+G++ VY+ + +VA+K+V AF RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKNRELQIMRKLDHC 73
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 74 -NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 132 SGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSXICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 70
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 71 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 121
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+A+FG
Sbjct: 122 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 27/197 (13%)
Query: 12 HTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEA 64
H+ +I +YEI +G+G+Y V + + +VA+K++ D + REI
Sbjct: 46 HSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAI 105
Query: 65 LQILQNSPNVVVLHEYFWREDE---DAVLVLEFLRTDLATVIAESKKKREDRGDRGISVG 121
L L + V VL ++ E + +VLE IA+S K+ R ++
Sbjct: 106 LNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE---------IADSDFKKLFRTPVYLTEL 156
Query: 122 EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAP-D 180
IK + +L GV H I+HRDLKP N L+ D +K+ DFG AR + D P +
Sbjct: 157 HIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV-----DYPEN 211
Query: 181 GNSQPCEPNAPYQDNMS 197
GNSQ P +P +D+M+
Sbjct: 212 GNSQ--LPISPREDDMN 226
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 263 SDVEDDLFKGTYSYDAEDGGDGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
S EDD+ T+ + + LT V TRW+RAPEL+ +Y +D+WS+
Sbjct: 219 SPREDDMNLVTFPH-----TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY-------QSAFREIEALQIL 68
++ KYE+++ +G GAY V+K +VA+K++ D Q FREI L L
Sbjct: 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65
Query: 69 QNSPNVVVLHEYFWRE-DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM 127
N+V L + D D LV +++ TDL VI + I K+++
Sbjct: 66 SGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN-----------ILEPVHKQYV 114
Query: 128 V-QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
V Q++ + H ++HRD+KP N+L+ + +K+ADFG +R
Sbjct: 115 VYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSR 157
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 283 DGRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D Q LT V TRW+RAPE+L GST Y +D+WSL L
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCIL 221
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 18/154 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L+ YF + L+LE+ L TV E +K + R + ++ ++ +
Sbjct: 72 NILRLYGYF-HDATRVYLILEY--APLGTVYRELQKLSKFDEQRTAT------YITELAN 122
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+A+FG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 78/155 (50%), Gaps = 24/155 (15%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQNSPNVVVLHE 79
VGSGAY V VA+K++ +QS A+RE+ L+ +Q+ NV+ L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGLLD 108
Query: 80 YF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
F R D LV+ F++TDL ++ S +I+ + Q+L G+
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGME-----------FSEEKIQYLVYQMLKGL 157
Query: 135 DACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
H +VHRDLKPGNL + +D LK+ DFG AR
Sbjct: 158 KYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 192
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 232
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 28/157 (17%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQNSPNVVVLHE 79
VGSGAY V VA+K++ +QS A+RE+ L+ +Q+ NV+ L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGLLD 90
Query: 80 YF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILS 132
F R D LV+ F++TDL ++ G+ E I+ + Q+L
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIM-------------GLKFSEEKIQYLVYQMLK 137
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
G+ H +VHRDLKPGNL + +D LK+ DFG AR
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR 174
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G R +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 169 DFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIM 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
++I+ +G G + +VY R + I+ALK + Q REIE L++ P
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-P 74
Query: 73 NVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N++ ++ YF + + L+LEF R +L + + + E R +M ++
Sbjct: 75 NILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS---------ATFMEELA 124
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF--REIEALQILQNS 71
RP+ ++ Y + +G+G++ VY+ + +VA+K+V AF RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKNRELQIMRKLDHC 73
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 74 -NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 132 SGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 6/165 (3%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF--REIEALQILQNS 71
RP+ ++ Y + +G+G++ VY+ + +VA+K+V AF RE++ ++ L +
Sbjct: 16 RPQEVS-YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ-GKAFKNRELQIMRKLDHC 73
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N+V L +F+ E V L D + R + + V +K +M Q+
Sbjct: 74 -NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLF 132
Query: 132 SGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQARILLGNE 175
+ H I HRD+KP NLL+ D VLKL DFG A+ L+ E
Sbjct: 133 RSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S + +R++RAPEL++G+T Y +D+WS L
Sbjct: 180 VSYICSRYYRAPELIFGATDYTSSIDVWSAGCVL 213
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 81 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 129
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR 175
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ +S+K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KSQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG R
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 14/162 (8%)
Query: 10 SIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV---HDYQSAFREIEALQ 66
S+ +PE + +++LE +G G+Y VYK IVA+K+V D Q +EI +Q
Sbjct: 22 SLTKQPEEV--FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQ 79
Query: 67 ILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
+SP+VV + +++ + D +V+E+ + I + K ++ EI
Sbjct: 80 QC-DSPHVVKYYGSYFK-NTDLWIVMEYCGAGSVSDIIRLRNK-------TLTEDEIATI 130
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ L G++ H +HRD+K GN+L+ +G KLADFG A
Sbjct: 131 LQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 85 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 133
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR 179
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
YEI +G G+Y VY + N VA+K+V+ D + REI L L+ S
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLK-SDY 88
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
++ LH+ ED +L+F + IA+S K+ + ++ +K + +L G
Sbjct: 89 IIRLHDLIIPED-----LLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
H + I+HRDLKP N L+ D +K+ DFG AR +
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTI 181
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWS 318
+ LTS V TRW+RAPEL+ +Y +D+WS
Sbjct: 210 KKQLTSHVVTRWYRAPELILLQENYTNSIDIWS 242
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 20/155 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N++ L+ YF + L+LE+ R ++ + + K E R ++ ++
Sbjct: 74 NILRLYGYF-HDATRVYLILEYAPRGEVYKELQKLSKFDEQR---------TATYITELA 123
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ + CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 90 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 138
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 184
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 190 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 224
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 81 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 129
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 84 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 132
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 91 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 139
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 225
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 20/155 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
+EI +G G + +VY R I+ALK + Q RE+E L++ P
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRH-P 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N++ L+ YF + L+LE+ R ++ + + K E R ++ ++
Sbjct: 74 NILRLYGYF-HDATRVYLILEYAPRGEVYKELQKLSKFDEQR---------TATYITELA 123
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ + CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 124 NALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 90
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 91 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 139
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 225
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 99 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 147
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 199 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 102 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 150
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V TRW+RAPE++ Y VD+WS+ +
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 102 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 150
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 202 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 236
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 98 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 146
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 198 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 81 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 129
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD-YQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 31 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHM 90
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 91 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 139
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 185
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 191 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 81 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 129
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 175
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 181 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 86 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 134
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 186 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 20/155 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
++I +G G + +VY R + I+ALK + Q REIE L++ P
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-P 74
Query: 73 NVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N++ ++ YF + + L+LEF R +L + + + E R +M ++
Sbjct: 75 NILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS---------ATFMEELA 124
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 125 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ + Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIM 213
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 30 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 89
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 90 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 138
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 184
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 190 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 224
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 85 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 133
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 86 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 134
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQGA--LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G R A +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 DFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 20/155 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQNSP 72
++I +G G + +VY R + I+ALK + Q REIE L++ P
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-P 75
Query: 73 NVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
N++ ++ YF + + L+LEF R +L + + + E R +M ++
Sbjct: 76 NILRMYNYF-HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRS---------ATFMEELA 125
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 126 DALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS---AFREIEALQILQN--S 71
I + +++ +G GAY V IVA+K++ + A R + ++IL++
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 72 PNVVVLHEYFWREDE-----DAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
N++ + R D + ++ E ++TDL VI+ + +S I+ +
Sbjct: 69 ENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVIS----------TQMLSDDHIQYF 117
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ Q L V H + ++HRDLKP NLLI + LK+ DFG ARI+
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G+Q +T V TRW+RAPE++ S Y +D+WS L
Sbjct: 174 GQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 84 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 132
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 18 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 78 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 126
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 172
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 178 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 212
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 86 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 134
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQGA--LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G R A +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 DFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 85 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 133
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 86 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 134
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 180
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQGA--LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G R A +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 DFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 75 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 123
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 77 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 125
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 171
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 177 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 211
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 76 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 124
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS---AFREIEALQILQN--S 71
I + +++ +G GAY V IVA+K++ + A R + ++IL++
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 72 PNVVVLHEYFWREDE-----DAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
N++ + R D + ++ E ++TDL VI+ + +S I+ +
Sbjct: 69 ENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVIS----------TQMLSDDHIQYF 117
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ Q L V H + ++HRDLKP NLLI + LK+ DFG ARI+
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G+Q +T V TRW+RAPE++ S Y +D+WS L
Sbjct: 174 GQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 19/164 (11%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ-- 69
+ +YE+L+ +G G++ V K + VALK V + ++ A EI L+ L+
Sbjct: 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ 153
Query: 70 ---NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ NV+ + E F + + E L +L +I ++K + G S+ ++++
Sbjct: 154 DKDNTMNVIHMLENFTFRNH-ICMTFELLSMNLYELIKKNKFQ-------GFSLPLVRKF 205
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQA 168
IL +DA H+N I+H DLKP N+L+ G +K+ DFG +
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ +R++RAPE++ G+ YG+ +D+WSL L
Sbjct: 260 IQSRFYRAPEVILGA-RYGMPIDMWSLGCIL 289
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 84 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 132
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 178
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 19/164 (11%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ-- 69
+ +YE+L+ +G G++ V K + VALK V + ++ A EI L+ L+
Sbjct: 94 HVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ 153
Query: 70 ---NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ NV+ + E F + + E L +L +I ++K + G S+ ++++
Sbjct: 154 DKDNTMNVIHMLENFTFRNH-ICMTFELLSMNLYELIKKNKFQ-------GFSLPLVRKF 205
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQA 168
IL +DA H+N I+H DLKP N+L+ G +K+ DFG +
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ +R++RAPE++ G+ YG+ +D+WSL L
Sbjct: 260 IQSRFYRAPEVILGA-RYGMPIDMWSLGCIL 289
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 21/165 (12%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS---AFREIEALQILQN--S 71
I + +++ +G GAY V IVA+K++ + A R + ++IL++
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKH 68
Query: 72 PNVVVLHEYFWREDE-----DAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
N++ + R D + ++ E ++TDL VI+ + +S I+ +
Sbjct: 69 ENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVIS----------TQMLSDDHIQYF 117
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ Q L V H + ++HRDLKP NLLI + LK+ DFG ARI+
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII 162
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G+Q + V TRW+RAPE++ S Y +D+WS L
Sbjct: 174 GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCIL 213
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L +GSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 24 EVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 84 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 132
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR 178
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 184 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 218
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 82/166 (49%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 76 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 124
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 170
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 176 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 210
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 83/164 (50%), Gaps = 19/164 (11%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ-- 69
+ +YE+L+ +G G + V K + VALK V + ++ A EI L+ L+
Sbjct: 94 HVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ 153
Query: 70 ---NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ NV+ + E F + + E L +L +I ++K + G S+ ++++
Sbjct: 154 DKDNTMNVIHMLENFTFRNH-ICMTFELLSMNLYELIKKNKFQ-------GFSLPLVRKF 205
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQA 168
IL +DA H+N I+H DLKP N+L+ G +K+ DFG +
Sbjct: 206 AHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ +R++RAPE++ G+ YG+ +D+WSL L
Sbjct: 260 IQSRFYRAPEVILGA-RYGMPIDMWSLGCIL 289
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDYQSAFREIEALQILQNSPNVV 75
L +G G++ VY R + ++ +VA+K++ +Q +E+ LQ L++ PN +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTI 117
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ RE A LV+E+ + ++ KK ++ ++ G L G+
Sbjct: 118 QYRGCYLRE-HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA--------LQGLA 168
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
H + ++HRD+K GN+L+ + G++KL DFG A I+
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 72 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 180
Query: 184 QPCEP 188
+ P
Sbjct: 181 EFVAP 185
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 72 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 120
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 180
Query: 184 QPCEP 188
+ P
Sbjct: 181 EFVAP 185
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ D+G AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDYQSAFREIEALQILQNSPNVV 75
L +G G++ VY R + ++ +VA+K++ +Q +E+ LQ L++ PN +
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRH-PNTI 78
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ RE A LV+E+ + ++ KK ++ ++ G L G+
Sbjct: 79 QYRGCYLRE-HTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA--------LQGLA 129
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
H + ++HRD+K GN+L+ + G++KL DFG A I+
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 4 PLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDY 55
PL + + P + +Y +G G ++ Y+ + + A K V H
Sbjct: 11 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 70
Query: 56 QSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRG 114
+ EI + L N P+VV H +F ED+D V +VLE R + E K+R
Sbjct: 71 EKMSTEIAIHKSLDN-PHVVGFHGFF--EDDDFVYVVLEICRR---RSLLELHKRR---- 120
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ ++ E + +M Q + GV H N ++HRDLK GNL + DD +K+ DFG A +
Sbjct: 121 -KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--- 176
Query: 175 EFDA 178
EFD
Sbjct: 177 EFDG 180
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 4 PLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDY 55
PL + + P + +Y +G G ++ Y+ + + A K V H
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 56 QSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRG 114
+ EI + L N P+VV H +F ED+D V +VLE R + E K+R
Sbjct: 87 EKMSTEIAIHKSLDN-PHVVGFHGFF--EDDDFVYVVLEICRR---RSLLELHKRR---- 136
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ ++ E + +M Q + GV H N ++HRDLK GNL + DD +K+ DFG A +
Sbjct: 137 -KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--- 192
Query: 175 EFDAPDGNSQPCEPN 189
EFD + PN
Sbjct: 193 EFDGERKKTLCGTPN 207
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 4 PLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDY 55
PL + + P + +Y +G G ++ Y+ + + A K V H
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 56 QSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRG 114
+ EI + L N P+VV H +F ED+D V +VLE R + E K+R
Sbjct: 87 EKMSTEIAIHKSLDN-PHVVGFHGFF--EDDDFVYVVLEICRR---RSLLELHKRR---- 136
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ ++ E + +M Q + GV H N ++HRDLK GNL + DD +K+ DFG A +
Sbjct: 137 -KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--- 192
Query: 175 EFDA 178
EFD
Sbjct: 193 EFDG 196
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 87/191 (45%), Gaps = 40/191 (20%)
Query: 21 YEILECVGSGAYSDV----------------YKGRRLSDNLI-VALKEVHDYQSAFREIE 63
YE+ E +GSG ++ V K RRLS + V+ +E+ + REI
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI- 72
Query: 64 ALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGE 122
PN++ LH+ F D VL+LE + +L +AE + ED E
Sbjct: 73 ------RHPNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESLTED---------E 116
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFD 177
+++ QIL GV H I H DLKP N+++ D V +KL DFG A +I GNEF
Sbjct: 117 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 176
Query: 178 APDGNSQPCEP 188
G + P
Sbjct: 177 NIFGTPEFVAP 187
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 86/184 (46%), Gaps = 23/184 (12%)
Query: 4 PLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDY 55
PL + + P + +Y +G G ++ Y+ + + A K V H
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 56 QSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRG 114
+ EI + L N P+VV H +F ED+D V +VLE R + E K+R
Sbjct: 87 EKMSTEIAIHKSLDN-PHVVGFHGFF--EDDDFVYVVLEICRR---RSLLELHKRR---- 136
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ ++ E + +M Q + GV H N ++HRDLK GNL + DD +K+ DFG A +
Sbjct: 137 -KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKI--- 192
Query: 175 EFDA 178
EFD
Sbjct: 193 EFDG 196
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 88/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
YE+ E +GSG ++ V K R+ A K + + + RE+ L+ ++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PN++ LH+ F D VL+LE + +L +AE + ED E +++
Sbjct: 67 H-PNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESLTED---------EATQFLK 115
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL GV H I H DLKP N+++ D V +KL DFG A +I GNEF G
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 175
Query: 184 QPCEP 188
+ P
Sbjct: 176 EFVAP 180
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-----------DYQSAFREIEALQILQ 69
YE+ E +GSG ++ V K R+ A K + + RE+ L+ ++
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PN++ LH+ F D VL+LE + +L +AE + ED E +++
Sbjct: 88 H-PNIITLHDIF-ENKTDVVLILELVSGGELFDFLAEKESLTED---------EATQFLK 136
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL GV H I H DLKP N+++ D V +KL DFG A +I GNEF G
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 196
Query: 184 QPCEP 188
+ P
Sbjct: 197 EFVAP 201
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 38 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 97
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 98 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 146
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 192
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 198 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 232
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+LE + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILILELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
P
Sbjct: 182 AFVAP 186
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQ 69
I Y + + +G G + V G+ VA+K ++ + REI+ L++ +
Sbjct: 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR 74
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ P+++ L++ D +V+E++ +L I ++ + E E +R
Sbjct: 75 H-PHIIKLYQVI-STPSDIFMVMEYVSGGELFDYICKNGRLDEK---------ESRRLFQ 123
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
QILSGVD CHR+ +VHRDLKP N+L+ K+ADFG + ++ EF
Sbjct: 124 QILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 171
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ +K ++ +
Sbjct: 75 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK----------LTDDHV 123
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 99 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 147
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 199 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 39 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 98
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 99 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 147
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V TRW+RAPE++ Y VD+WS+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 233
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ FG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 91/160 (56%), Gaps = 17/160 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
+EIL+ +G GA+ +V + + + + A+K ++ ++ + FRE + + +S
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 74 VVVLHEYFWREDEDAVLVLEF-LRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
+ LH Y +++D + LV+++ + DL T+++ K EDR ++ + ++ +++
Sbjct: 136 ITTLH-YAFQDDNNLYLVMDYYVGGDLLTLLS----KFEDRLPEEMA----RFYLAEMVI 186
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL 172
+D+ H+ VHRD+KP N+L+ +G ++LADFG L+
Sbjct: 187 AIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 85 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 133
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 179
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 185 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 173
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 75 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 123
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 29 EVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 89 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 137
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 138 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 183
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 189 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 75 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 123
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DFG AR
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR 169
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ V TRW+RAPE++ Y VD+WS+ +
Sbjct: 175 MAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 209
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQ--NSPNVVV 76
++++ G G + V G+ S + VA+K+V D + RE++ +Q L + PN+V
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQ 83
Query: 77 LHEYFW------REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
L YF+ R D +V+E++ L +++ I V ++ Q+
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKV-----FLFQL 138
Query: 131 LSGVDACHRNTI--VHRDLKPGNLLIGD-DGVLKLADFGQARILLGNEFDAPDGNSQPCE 187
+ + H ++ HRD+KP N+L+ + DG LKL DFG A+ L P E
Sbjct: 139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL------------SPSE 186
Query: 188 PNAPY 192
PN Y
Sbjct: 187 PNVAY 191
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
+ +R++RAPEL++G+ Y VD+WS+
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGC 220
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQNSPNVVVLHEYFW 82
+G G Y VY GR LS+ + +A+KE+ + Y E AL N+V +Y
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV---QYLG 86
Query: 83 REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTI 142
E+ + + + ++ A + K D ++G + QIL G+ H N I
Sbjct: 87 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG---FYTKQILEGLKYLHDNQI 143
Query: 143 VHRDLKPGNLLIGD-DGVLKLADFGQARILLG 173
VHRD+K N+LI GVLK++DFG ++ L G
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ L+ +
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVI-AESKKKREDRGDRGISVGEI 123
N N++ L F E +D LV+E + +L VI E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER------------M 128
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAP 179
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR N P
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTP 184
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 182 MTPYVVTRYYRAPEVILG-MGYAANVDIWSVGCIM 215
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 81
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 192
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 81
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 192
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 80
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 191
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 81
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 82 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 141
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 142 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 192
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 100
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 101 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 160
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 161 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 211
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L+ +G GAY V VA+K++ + Q REI+ L ++ N
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHE-N 102
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
V+ +L D +V + + TDL ++ + +S I ++ Q
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ----------LSNDHICYFLYQ 152
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLLI LK+ DFG ARI
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI 193
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 202 GFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQNSPNVVVLHEYFW 82
+G G Y VY GR LS+ + +A+KE+ + Y E AL N+V +Y
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIV---QYLG 72
Query: 83 REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTI 142
E+ + + + ++ A + K D ++G + QIL G+ H N I
Sbjct: 73 SFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIG---FYTKQILEGLKYLHDNQI 129
Query: 143 VHRDLKPGNLLIGD-DGVLKLADFGQARILLG 173
VHRD+K N+LI GVLK++DFG ++ L G
Sbjct: 130 VHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 80
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 81 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 140
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 141 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 191
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 66
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 177
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 94
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 95 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 154
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 155 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 205
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVL 77
++Y++ +GSG + VY G R+SDNL VA+K V D S + E L P VVL
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE---LPNGTRVPMEVVL 93
Query: 78 HEYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQIL 131
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 132 SGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 205
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVL 77
++Y++ +GSG + VY G R+SDNL VA+K V D S + E L P VVL
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE---LPNGTRVPMEVVL 92
Query: 78 HEYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQIL 131
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 132 SGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 204
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVL 77
++Y++ +GSG + VY G R+SDNL VA+K V D S + E L P VVL
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE---LPNGTRVPMEVVL 93
Query: 78 HEYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQIL 131
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 132 SGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 205
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 108
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 109 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 168
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 169 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 219
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 65
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 176
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 88
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 89 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 148
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 149 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 199
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVL 77
++Y++ +GSG + VY G R+SDNL VA+K V D S + E L P VVL
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE---LPNGTRVPMEVVL 93
Query: 78 HEYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQIL 131
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 94 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 153
Query: 132 SGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 154 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 205
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVL 77
++Y++ +GSG + VY G R+SDNL VA+K V D S + E L P VVL
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE---LPNGTRVPMEVVL 92
Query: 78 HEYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQIL 131
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 93 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 152
Query: 132 SGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 153 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ D G AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR 173
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G R +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 168 DAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 61
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
V CH ++HRD+K N+LI + G LKL DFG +L + DG P
Sbjct: 122 AVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPP 178
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 66
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 177
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 66
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 67 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 126
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 127 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 177
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 93
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 204
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 93
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 94 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 153
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 154 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 204
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ L+ +
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV- 78
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVI-AESKKKREDRGDRGISVGEI 123
N N++ L F E +D LV+E + +L VI E +R +
Sbjct: 79 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHER------------M 126
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAP 179
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR N P
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTP 182
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 180 MTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 213
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 113
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 114 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 173
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 174 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 224
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 65
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 66 KKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLE 125
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 126 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 176
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 11/172 (6%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVL 77
++Y++ +GSG + VY G R+SDNL VA+K V D S + E+ P VVL
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPN---GTRVPMEVVL 107
Query: 78 HEYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQIL 131
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 108 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 167
Query: 132 SGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 168 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 219
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ D G AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR 173
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 61
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 172
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF--REIEALQILQNSPNVVVLHEYFWRE 84
+G G++S K N A+K + A +EI AL++ + PN+V LHE F +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVF-HD 77
Query: 85 DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVH 144
LV+E L + KKK+ S E M +++S V H +VH
Sbjct: 78 QLHTFLVMELLNG--GELFERIKKKKH------FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 145 RDLKPGNLLIGDDG---VLKLADFGQARI 170
RDLKP NLL D+ +K+ DFG AR+
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 61
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 121
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 122 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 172
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 82/171 (47%), Gaps = 9/171 (5%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
++Y++ +GSG + VY G R+SDNL VA+K V + + L P VVL
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVE--KDRISDWGELPNGTRVPMEVVLL 64
Query: 79 EYFWREDEDAVLVLE-FLRTDLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILS 132
+ + +L+ F R D +I E + +D D RG E+ R + Q+L
Sbjct: 65 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLE 124
Query: 133 GVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
V CH ++HRD+K N+LI + G LKL DFG +L + DG
Sbjct: 125 AVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGT 175
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V L VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ + +K +D +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-KCQKLTDD---------HV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ D G AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR 173
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
DGG R +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 168 DGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNSPNV 74
YE+ E +GSGA + V VA+K ++ +EI+A+ + PN+
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH-PNI 75
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
V + F +DE LV++ L I + + + + I + ++L G+
Sbjct: 76 VSYYTSFVVKDE-LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 135 DACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ H+N +HRD+K GN+L+G+DG +++ADFG + L
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 14 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 69
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 70 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 121
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + AP G P +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 190 AP 191
AP
Sbjct: 182 AP 183
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 13 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 68
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 69 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 120
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + AP G P +
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 190 AP 191
AP
Sbjct: 181 AP 182
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNSPNV 74
YE+ E +GSGA + V VA+K ++ +EI+A+ + PN+
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH-PNI 70
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
V + F +DE LV++ L I + + + + I + ++L G+
Sbjct: 71 VSYYTSFVVKDE-LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 135 DACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ H+N +HRD+K GN+L+G+DG +++ADFG + L
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 166
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 118
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 167
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 253
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 87/185 (47%), Gaps = 28/185 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEALQILQ 69
Y+ E +GSG ++ V K R S L A K + ++ RE+ L+ +Q
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ PNV+ LHE + D +L+ E + +L +AE + E+ E ++
Sbjct: 73 H-PNVITLHE-VYENKTDVILIGELVAGGELFDFLAEKESLTEE---------EATEFLK 121
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQA-RILLGNEFDAPDGNS 183
QIL+GV H I H DLKP N+++ D V +K+ DFG A +I GNEF G
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 184 QPCEP 188
+ P
Sbjct: 182 EFVAP 186
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 80/167 (47%), Gaps = 24/167 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V + ++ A K ++ D+Q RE ++L++ PN
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH-PN 64
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLAT--VIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V LH+ E +L DL T + E RE S + + QIL
Sbjct: 65 IVRLHDSISEEG------FHYLVFDLVTGGELFEDIVARE-----YYSEADASHCIQQIL 113
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQARILLGNE 175
V+ CH N IVHRDLKP NLL+ +KLADFG A + G++
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L+ VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIM 215
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
YE+++ +G GA+ +V R S + A+K + ++ + F E + NSP
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 74 VVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
VV L Y +++D +V+E++ DL +++ + + + + +++
Sbjct: 136 VVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMS----------NYDVPEKWARFYTAEVVL 184
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+DA H +HRD+KP N+L+ G LKLADFG
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
YE+++ +G GA+ +V R S + A+K + ++ + F E + NSP
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 130
Query: 74 VVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
VV L Y +++D +V+E++ DL +++ + + + + +++
Sbjct: 131 VVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMS----------NYDVPEKWARFYTAEVVL 179
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+DA H +HRD+KP N+L+ G LKLADFG
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE-N 84
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 134
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV 175
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
YE+++ +G GA+ +V R S + A+K + ++ + F E + NSP
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 135
Query: 74 VVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
VV L Y +++D +V+E++ DL +++ + + + + +++
Sbjct: 136 VVQLF-YAFQDDRYLYMVMEYMPGGDLVNLMS----------NYDVPEKWARFYTAEVVL 184
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+DA H +HRD+KP N+L+ G LKLADFG
Sbjct: 185 ALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L+ VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 118
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 119 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 167
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 253
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 56 QSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRG 114
+ ++EI L+ L + PNVV L E +ED + +V E + + K ED+
Sbjct: 81 EQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQA 139
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ + ++ G++ H I+HRD+KP NLL+G+DG +K+ADFG + N
Sbjct: 140 ---------RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG-----VSN 185
Query: 175 EFDAPDG 181
EF D
Sbjct: 186 EFKGSDA 192
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSP 72
+EI+ +G GA+ VYK + +++ A K E+ DY EI+ L + P
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV---EIDILASC-DHP 94
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L + F+ E+ +L+ + V+ E +R ++ +I+ Q L
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--------ERPLTESQIQVVCKQTLD 146
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ H N I+HRDLK GN+L DG +KLADFG
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 180
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSP 72
+EI+ +G GA+ VYK + +++ A K E+ DY EI+ L + P
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV---EIDILASC-DHP 94
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L + F+ E+ +L+ + V+ E +R ++ +I+ Q L
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--------ERPLTESQIQVVCKQTLD 146
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ H N I+HRDLK GN+L DG +KLADFG
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 180
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 24/168 (14%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+Y++ E +G GA+S V + ++ A K ++ D+Q RE ++L++ P
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH-P 63
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLAT--VIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V LH+ E +L DL T + E RE S + + QI
Sbjct: 64 NIVRLHDSISEEG------FHYLVFDLVTGGELFEDIVARE-----YYSEADASHCIQQI 112
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQARILLGNE 175
L V+ CH N IVHRDLKP NLL+ +KLADFG A + G++
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ 160
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 10 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 65
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ +S + Q
Sbjct: 66 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 117
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ F A G P +
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT 177
Query: 190 AP 191
AP
Sbjct: 178 AP 179
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSP 72
+EI+ +G GA+ VYK + +++ A K E+ DY EI+ L + P
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV---EIDILASC-DHP 94
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V L + F+ E+ +L+ + V+ E +R ++ +I+ Q L
Sbjct: 95 NIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL--------ERPLTESQIQVVCKQTLD 146
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ H N I+HRDLK GN+L DG +KLADFG
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG 180
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L+ VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGVIM 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 12 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE +++ +L + E ++ +S + Q
Sbjct: 68 H-PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 119
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 190 AP 191
AP
Sbjct: 180 AP 181
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++++
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L+ VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 23/159 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQSAFREIEALQILQNSPNVVV 76
+E++E VG+G Y VYKGR + + A+K + + + +EI L+ + N+
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 77 LHEYFWRE-----DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV--- 128
+ F ++ D+ LV+EF T + ++ K G ++ E W+
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK--------GNTLKE--EWIAYIC 135
Query: 129 -QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+IL G+ H++ ++HRD+K N+L+ ++ +KL DFG
Sbjct: 136 REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFG 174
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 81
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 130
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHE-N 84
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 134
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 21 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 79
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 80 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 128
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 214
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 81
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 82 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 130
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 216
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 12 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE +++ +L + E ++ +S + Q
Sbjct: 68 H-PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 119
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 190 AP 191
AP
Sbjct: 180 AP 181
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQ 69
I Y + + +G G + V G VA+K ++ + REI+ L++ +
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ P+++ L++ D +V+E++ +L I + + E E +R
Sbjct: 70 H-PHIIKLYQVI-STPTDFFMVMEYVSGGELFDYICKHGRVEE---------MEARRLFQ 118
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QILS VD CHR+ +VHRDLKP N+L+ K+ADFG + ++ EF S
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAA 178
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 179 PEVISGRLYAGPEVDI 194
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
TSC G+ + APE++ G G EVD+WS L
Sbjct: 169 TSC-GSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 74
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 123
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 209
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 73
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 122
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 208
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 74
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 75 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 123
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 209
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 79/168 (47%), Gaps = 24/168 (14%)
Query: 21 YEILECVGSGAYSDVYK--GRRLSDNLIVALKEVHDYQSA--------FREIEALQILQN 70
YE+ E +G GA+S V + R V + +V + S+ RE +L++
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI--KRWMV 128
P++V L E + D +L + F D A + E K R D G E +M
Sbjct: 86 -PHIVELLETY---SSDGMLYMVFEFMDGADLCFEIVK----RADAGFVYSEAVASHYMR 137
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARILLG 173
QIL + CH N I+HRD+KP N+L+ + +KL DFG A I LG
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLG 184
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 73
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 74 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-----QMELDHER------MS 122
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 208
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ +Y+ L VGSGAY V VA+K++ +QS +RE+ L+ +
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F E D LV + DL ++ K ++ +
Sbjct: 79 KHE-NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK----------LTDDHV 127
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + QIL G+ H I+HRDLKP NL + +D LK+ DF AR
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR 173
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 179 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V + VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D LV+E + +L VI + E +R +
Sbjct: 81 NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLS---DNLIVALKEVHDYQSAFREIEALQILQ------ 69
+ +E+L+ +G G++ V+ R+++ + A+K + R+ ++ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P VV LH Y ++ + L+L+FLR DL T +++ E+ ++K ++
Sbjct: 88 NHPFVVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---------DVKFYLA 137
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ G+D H I++RDLKP N+L+ ++G +KL DFG ++
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 178
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 84
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 134
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 175
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 184 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 220
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 82
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 82
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 20/196 (10%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREIEALQILQ 69
I Y + + +G G + V G VA+K ++ + REI+ L++ +
Sbjct: 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR 69
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ P+++ L++ D +V+E++ +L I + + E E +R
Sbjct: 70 H-PHIIKLYQVI-STPTDFFMVMEYVSGGELFDYICKHGRVEE---------MEARRLFQ 118
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QILS VD CHR+ +VHRDLKP N+L+ K+ADFG + ++ EF S
Sbjct: 119 QILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAA 178
Query: 189 NAPYQDNMSEAPQVDL 204
+ P+VD+
Sbjct: 179 PEVISGRLYAGPEVDI 194
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 82
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 102
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 152
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 193
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 86
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 136
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEAL-QIL 68
Y+I E +GSG ++ V K R S L A K + QS RE+ L Q+L
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
PN++ LH+ + D VL+LE + +L +A+ + +S E ++
Sbjct: 74 H--PNIITLHDV-YENRTDVVLILELVSGGELFDFLAQKE---------SLSEEEATSFI 121
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQAR-ILLGNEFDAPDGN 182
QIL GV+ H I H DLKP N+++ D + +KL DFG A I G EF G
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 183 SQPCEP 188
+ P
Sbjct: 182 PEFVAP 187
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 90
Query: 74 VVVLHEYF----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ +++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 140
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 181
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 190 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 226
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 82
Query: 74 VVVLHEYF----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ +++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 173
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHE-N 86
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 136
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 12 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ +S + Q
Sbjct: 68 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 119
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 190 AP 191
AP
Sbjct: 180 AP 181
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 87
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 137
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 187 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 223
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 88
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 138
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 179
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 188 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 224
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 79
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 129
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 170
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 179 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 215
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 86
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 136
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQN----- 70
E I +++ +G G+++ VY+ + L VA+K + + A + +Q +QN
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMID--KKAMYKAGMVQRVQNEVKIH 65
Query: 71 ----SPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
P+++ L+ YF ED + V LVLE E + ++R + S E +
Sbjct: 66 CQLKHPSILELYNYF--EDSNYVYLVLEMCHN------GEMNRYLKNRV-KPFSENEARH 116
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+M QI++G+ H + I+HRDL NLL+ + +K+ADFG A
Sbjct: 117 FMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 80
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 130
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 80
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 130
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 180 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 216
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 82
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 182 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 218
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 17 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ +S + Q
Sbjct: 73 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 190 AP 191
AP
Sbjct: 185 AP 186
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 25/162 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNVVVLH 78
+ +G GA ++V++GR + A+K ++ RE E L+ L N N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKL- 72
Query: 79 EYFWREDEDA----VLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
F E+E VL++EF L TV+ E G+ E + ++ G
Sbjct: 73 --FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY------GLPESEFLIVLRDVVGG 124
Query: 134 VDACHRNTIVHRDLKPGNLL--IGDDG--VLKLADFGQARIL 171
++ N IVHR++KPGN++ IG+DG V KL DFG AR L
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 12 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ +S + Q
Sbjct: 68 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 119
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 190 AP 191
AP
Sbjct: 180 AP 181
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 86
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 136
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G L V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 186 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 87
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 137
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G L V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 187 GFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 223
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L+ VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 25/162 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNVVVLH 78
+ +G GA ++V++GR + A+K ++ RE E L+ L N N+V L
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-NHKNIVKL- 72
Query: 79 EYFWREDEDA----VLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
F E+E VL++EF L TV+ E G+ E + ++ G
Sbjct: 73 --FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY------GLPESEFLIVLRDVVGG 124
Query: 134 VDACHRNTIVHRDLKPGNLL--IGDDG--VLKLADFGQARIL 171
++ N IVHR++KPGN++ IG+DG V KL DFG AR L
Sbjct: 125 MNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 17 IIAKYEILECVGSGAYSDVYK------GRRLSDNLIVALKEVHDYQSAFREIEALQILQN 70
++ Y+I E +G+GA+ V++ G + ++ E D ++ +EI+ + +L++
Sbjct: 49 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHES-DKETVRKEIQTMSVLRH 107
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
P +V LH+ F +D + V++ EF+ +L +A+ K +S E +M Q
Sbjct: 108 -PTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNK--------MSEDEAVEYMRQ 157
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGD--DGVLKLADFG---------QARILLGN-EFD 177
+ G+ H N VH DLKP N++ LKL DFG ++ G EF
Sbjct: 158 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 217
Query: 178 APD 180
AP+
Sbjct: 218 APE 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V + + L A K ++ D+Q RE + LQ+ PN
Sbjct: 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PN 89
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQILS 132
+V LH+ E +L DL T + ED R S + + QIL
Sbjct: 90 IVRLHDSIQEES------FHYLVFDLVT----GGELFEDIVAREFYSEADASHCIQQILE 139
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
+ CH N IVHR+LKP NLL+ +KLADFG A
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 17 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE +++ +L + E ++ ++ + Q
Sbjct: 73 H-PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 190 AP 191
AP
Sbjct: 185 AP 186
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 17 IIAKYEILECVGSGAYSDVYK------GRRLSDNLIVALKEVHDYQSAFREIEALQILQN 70
++ Y+I E +G+GA+ V++ G + ++ E D ++ +EI+ + +L++
Sbjct: 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE-SDKETVRKEIQTMSVLRH 213
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
P +V LH+ F +D + V++ EF+ +L +A+ K +S E +M Q
Sbjct: 214 -PTLVNLHDAF-EDDNEMVMIYEFMSGGELFEKVADEHNK--------MSEDEAVEYMRQ 263
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGD--DGVLKLADFG---------QARILLGN-EFD 177
+ G+ H N VH DLKP N++ LKL DFG ++ G EF
Sbjct: 264 VCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFA 323
Query: 178 APD 180
AP+
Sbjct: 324 APE 326
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y I +G G+Y VY + VA+K+V+ D + REI L L+ S
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK-SDY 86
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
++ L++ +D +L+F + IA+S K+ + ++ IK + +L G
Sbjct: 87 IIRLYDLIIPDD-----LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ H + I+HRDLKP N L+ D +K+ DFG AR +
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWS 318
+ LTS V TRW+RAPEL+ +Y +D+WS
Sbjct: 205 KKQLTSHVVTRWYRAPELILLQENYTKSIDIWS 237
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V + + L A K ++ D+Q RE + LQ+ PN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PN 66
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQILS 132
+V LH+ E +L DL T + ED R S + + QIL
Sbjct: 67 IVRLHDSIQEES------FHYLVFDLVT----GGELFEDIVAREFYSEADASHCIQQILE 116
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
+ CH N IVHR+LKP NLL+ +KLADFG A
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 19/155 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
+EIL+ +G GA+S+V + + A+K ++ + S FRE +L N
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE--ERDVLVNGDR 120
Query: 74 VVVLHEYFWREDEDAV-LVLEF-LRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+ +F +DE+ + LV+E+ + DL T++++ ++ I + ++ +I+
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER--------IPAEMARFYLAEIV 172
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+D+ HR VHRD+KP N+L+ G ++LADFG
Sbjct: 173 MAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 32/173 (18%)
Query: 19 AKYEILECVGSGAYSDVYKG------RRLSDNLIVALKEVHDYQSAFREIEALQILQNSP 72
++Y L+ +G G V+ +R++ IV L + + A REI+ ++ L +
Sbjct: 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIV-LTDPQSVKHALREIKIIRRLDHD- 68
Query: 73 NVVVLHEYF-------------WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGIS 119
N+V + E E +V E++ TDLA V+ + E
Sbjct: 69 NIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEE-------- 120
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARIL 171
+ +M Q+L G+ H ++HRDLKP NL I +D VLK+ DFG ARI+
Sbjct: 121 --HARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 21/34 (61%)
Query: 285 RQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWS 318
+G L+ + T+W+R+P LL +Y +D+W+
Sbjct: 177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 210
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V + + L A K ++ D+Q RE + LQ+ PN
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PN 65
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQILS 132
+V LH+ E +L DL T + ED R S + + QIL
Sbjct: 66 IVRLHDSIQEES------FHYLVFDLVT----GGELFEDIVAREFYSEADASHCIQQILE 115
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
+ CH N IVHR+LKP NLL+ +KLADFG A
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V + + L A K ++ D+Q RE + LQ+ PN
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH-PN 66
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQILS 132
+V LH+ E +L DL T + ED R S + + QIL
Sbjct: 67 IVRLHDSIQEES------FHYLVFDLVT----GGELFEDIVAREFYSEADASHCIQQILE 116
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
+ CH N IVHR+LKP NLL+ +KLADFG A
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDN----------LIVALKEVHDYQSAFREIEALQIL 68
+++E+L+ +G G++ V+ +++S + L A +V D E + L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-VE 82
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V LH Y ++ + L+L+FLR DL T +++ E+ ++K ++
Sbjct: 83 VNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---------DVKFYL 132
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ +D H I++RDLKP N+L+ ++G +KL DFG ++
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 78/154 (50%), Gaps = 19/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
Y++++ +G GA+ +V R + + A+K + ++ + F E + NSP
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPW 136
Query: 74 VVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
VV L F ++D+ +V+E++ DL +++ + + K + +++
Sbjct: 137 VVQLFCAF-QDDKYLYMVMEYMPGGDLVNLMS----------NYDVPEKWAKFYTAEVVL 185
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+DA H ++HRD+KP N+L+ G LKLADFG
Sbjct: 186 ALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 86
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK----------CQHLSNDHICYFLYQ 136
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 10 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 65
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE +++ +L + E ++ +S + Q
Sbjct: 66 H-PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 117
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ A G P +
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 190 AP 191
AP
Sbjct: 178 AP 179
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 2 EQPLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFRE 61
E+ L K SI + + KY E +G GA VY ++ VA+++++ Q +E
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 62 IEALQIL----QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDR 116
+ +IL +PN+V + + DE V V+E+L L V+ E+
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTET---------- 111
Query: 117 GISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ G+I + L ++ H N ++HRD+K N+L+G DG +KL DFG
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q + VGT ++ APE++ +YG +VD+WSL
Sbjct: 170 QSKRSEMVGTPYWMAPEVV-TRKAYGPKVDIWSL 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L+ VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA++++ + Q REI+ L ++ N
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHE-N 86
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D +V + + TDL ++ + +S I ++ Q
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT----------QHLSNDHICYFLYQ 136
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 186 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 2 EQPLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFRE 61
E+ L K SI + + KY E +G GA VY ++ VA+++++ Q +E
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 62 IEALQIL----QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDR 116
+ +IL +PN+V + + DE V V+E+L L V+ E+
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTET---------- 111
Query: 117 GISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ G+I + L ++ H N ++HRD+K N+L+G DG +KL DFG
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q ++ VGT ++ APE++ +YG +VD+WSL
Sbjct: 170 QSKRSTMVGTPYWMAPEVV-TRKAYGPKVDIWSL 202
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 27 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 85
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 86 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 134
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 179
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VDLWS+ +
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIM 220
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 2 EQPLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFRE 61
E+ L K SI + + KY E +G GA VY ++ VA+++++ Q +E
Sbjct: 3 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 62
Query: 62 IEALQIL----QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDR 116
+ +IL +PN+V + + DE V V+E+L L V+ E+
Sbjct: 63 LIINEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTET---------- 111
Query: 117 GISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ G+I + L ++ H N ++HRD+K N+L+G DG +KL DFG
Sbjct: 112 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 161
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q + VGT ++ APE++ +YG +VD+WSL
Sbjct: 170 QSKRSXMVGTPYWMAPEVV-TRKAYGPKVDIWSL 202
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPN 73
+Y L +G GAY V + + VA+K++ + Q REI+ L ++ N
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHE-N 102
Query: 74 VV----VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++ ++ + +D LV + DL ++ + +S I ++ Q
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT----------QHLSNDHICYFLYQ 152
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
IL G+ H ++HRDLKP NLL+ LK+ DFG AR+
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV 193
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 287 GALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G LT V TRW+RAPE++ S Y +D+WS+ L
Sbjct: 202 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCIL 238
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDN----------LIVALKEVHDYQSAFREIEALQIL 68
+++E+L+ +G G++ V+ +++S + L A +V D E + L +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-VE 83
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V LH Y ++ + L+L+FLR DL T +++ E+ ++K ++
Sbjct: 84 VNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---------DVKFYL 133
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ +D H I++RDLKP N+L+ ++G +KL DFG ++
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 175
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 86/162 (53%), Gaps = 22/162 (13%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDN----------LIVALKEVHDYQSAFREIEALQIL 68
+++E+L+ +G G++ V+ +++S + L A +V D E + L +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-VE 82
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V LH Y ++ + L+L+FLR DL T +++ E+ ++K ++
Sbjct: 83 VNHPFIVKLH-YAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE---------DVKFYL 132
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ +D H I++RDLKP N+L+ ++G +KL DFG ++
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSK 174
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 24 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 82
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 83 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 131
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 176
Score = 31.6 bits (70), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G + V TR++RAPE++ G Y VD+WS+ +
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 17 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 73 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 190 AP 191
AP
Sbjct: 185 AP 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 2 EQPLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFRE 61
E+ L K SI + + KY E +G GA VY ++ VA+++++ Q +E
Sbjct: 4 EEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKE 63
Query: 62 IEALQIL----QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDR 116
+ +IL +PN+V + + DE V V+E+L L V+ E+
Sbjct: 64 LIINEILVMRENKNPNIVNYLDSYLVGDELWV-VMEYLAGGSLTDVVTET---------- 112
Query: 117 GISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ G+I + L ++ H N ++HRD+K N+L+G DG +KL DFG
Sbjct: 113 CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFG 162
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q + VGT ++ APE++ +YG +VD+WSL
Sbjct: 171 QSKRSXMVGTPYWMAPEVV-TRKAYGPKVDIWSL 203
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 81
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 82 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 130
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 16 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 74
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 75 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 123
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VDLWS+ +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDLWSVGCIM 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V TR++RAPE++ G Y VD+WS+ +
Sbjct: 186 VVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
G +T V TR++RAPE++ G Y VD+WS+ +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIM 215
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQILQ 69
++ +Y+ L+ +GSGA V VA+K++ +Q+ A+RE+ ++ +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV- 80
Query: 70 NSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
N N++ L F E +D +V+E + +L VI + E +R +
Sbjct: 81 NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI-----QMELDHER------MS 129
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ Q+L G+ H I+HRDLKP N+++ D LK+ DFG AR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V TR++RAPE++ G Y VDLWS+ +
Sbjct: 186 VVTRYYRAPEVILG-MGYKENVDLWSVGCIM 215
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 14 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 69
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 70 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 121
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 190 AP 191
AP
Sbjct: 182 AP 183
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 17 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 73 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 190 AP 191
AP
Sbjct: 185 AP 186
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 14 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 69
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 70 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 121
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 122 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 190 AP 191
AP
Sbjct: 182 AP 183
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 25 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 80
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 81 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 133 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 190 AP 191
AP
Sbjct: 193 AP 194
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 16 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 71
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 72 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 123
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 124 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 190 AP 191
AP
Sbjct: 184 AP 185
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 12 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 68 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 119
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 190 AP 191
AP
Sbjct: 180 AP 181
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 219 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 274
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ +S + Q
Sbjct: 275 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 326
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HR+L N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 386
Query: 190 AP 191
AP
Sbjct: 387 AP 388
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEAL-QIL 68
Y+I E +GSG ++ V K R S L A K + QS RE+ L Q+L
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ NV+ LH+ + D VL+LE + +L +A+ + E+ E ++
Sbjct: 74 HH--NVITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEE---------EATSFI 121
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQAR-ILLGNEFDAPDGN 182
QIL GV+ H I H DLKP N+++ D + +KL DFG A I G EF G
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 183 SQPCEP 188
+ P
Sbjct: 182 PEFVAP 187
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 189 NAP 191
AP
Sbjct: 348 TAP 350
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 189 NAP 191
AP
Sbjct: 348 TAP 350
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 12 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 67
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 68 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 119
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 190 AP 191
AP
Sbjct: 180 AP 181
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 189 NAP 191
AP
Sbjct: 348 TAP 350
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEAL-QIL 68
Y+I E +GSG ++ V K R S L A K + QS RE+ L Q+L
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ NV+ LH+ + D VL+LE + +L +A+ + E+ E ++
Sbjct: 74 HH--NVITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEE---------EATSFI 121
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQAR-ILLGNEFDAPDGN 182
QIL GV+ H I H DLKP N+++ D + +KL DFG A I G EF G
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 183 SQPCEP 188
+ P
Sbjct: 182 PEFVAP 187
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEAL-QIL 68
Y+I E +GSG ++ V K R S L A K + QS RE+ L Q+L
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ NV+ LH+ + D VL+LE + +L +A+ + E+ E ++
Sbjct: 74 HH--NVITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEE---------EATSFI 121
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQAR-ILLGNEFDAPDGN 182
QIL GV+ H I H DLKP N+++ D + +KL DFG A I G EF G
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 183 SQPCEP 188
+ P
Sbjct: 182 PEFVAP 187
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEAL-QIL 68
Y+I E +GSG ++ V K R S L A K + QS RE+ L Q+L
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ NV+ LH+ + D VL+LE + +L +A+ + E+ E ++
Sbjct: 74 HH--NVITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEE---------EATSFI 121
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQAR-ILLGNEFDAPDGN 182
QIL GV+ H I H DLKP N+++ D + +KL DFG A I G EF G
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 183 SQPCEP 188
+ P
Sbjct: 182 PEFVAP 187
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQS--AFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N V +K + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 13/154 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVV 75
Y ++ +G G +S V L D ALK + D + A RE + + L N PN++
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREAD-MHRLFNHPNIL 89
Query: 76 VLHEYFWRE---DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
L Y RE +A L+L F + + ++ +D+G+ ++ +I ++ I
Sbjct: 90 RLVAYCLRERGAKHEAWLLLPFFKRG---TLWNEIERLKDKGNF-LTEDQILWLLLGICR 145
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
G++A H HRDLKP N+L+GD+G L D G
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG 179
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 86/186 (46%), Gaps = 30/186 (16%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAF-----------REIEAL-QIL 68
Y+I E +GSG ++ V K R S L A K + QS RE+ L Q+L
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ NV+ LH+ + D VL+LE + +L +A+ + E+ E ++
Sbjct: 74 HH--NVITLHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEE---------EATSFI 121
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGV----LKLADFGQAR-ILLGNEFDAPDGN 182
QIL GV+ H I H DLKP N+++ D + +KL DFG A I G EF G
Sbjct: 122 KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGT 181
Query: 183 SQPCEP 188
+ P
Sbjct: 182 PEFVAP 187
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 115 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 189 NAP 191
AP
Sbjct: 175 TAP 177
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 170
Query: 189 NAP 191
AP
Sbjct: 171 TAP 173
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 189 NAP 191
AP
Sbjct: 173 TAP 175
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 178
Query: 189 NAP 191
AP
Sbjct: 179 TAP 181
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 87/174 (50%), Gaps = 13/174 (7%)
Query: 22 EILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQSAFREIEALQILQNSPNVVVL 77
++++ +G+G + +V+ G +++ VA+K + Q+ E ++ LQ+ +V L
Sbjct: 16 KLVKRLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD-KLVRL 73
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ RE+ ++ + L + + D G + + + ++ + QI G+
Sbjct: 74 YAVVTREEPIYIITEYMAKGSLLDFL------KSDEGGK-VLLPKLIDFSAQIAEGMAYI 126
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
R +HRDL+ N+L+ + + K+ADFG AR++ NE+ A +G P + AP
Sbjct: 127 ERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 180
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 13 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 68
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE +++ +L + E ++ ++ + Q
Sbjct: 69 H-PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 120
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ A G P +
Sbjct: 121 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 190 AP 191
AP
Sbjct: 181 AP 182
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVY------KGRRLSDNLIVA--LKEVHDYQS 57
P + H+ +Y+ +G G++ +V G+ + +I +K+ D +S
Sbjct: 36 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 95
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG 117
RE++ L+ L + PN++ L+E+F ED+ ++ + T +KR D
Sbjct: 96 LLREVQLLKQL-DHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 152
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARILLGN 174
R + Q+LSG+ H+N IVHRDLKP NLL+ D +++ DFG L
Sbjct: 153 -------RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-----LST 200
Query: 175 EFDA 178
F+A
Sbjct: 201 HFEA 204
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVY------KGRRLSDNLIVA--LKEVHDYQS 57
P + H+ +Y+ +G G++ +V G+ + +I +K+ D +S
Sbjct: 37 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 96
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG 117
RE++ L+ L + PN++ L+E+F ED+ ++ + T +KR D
Sbjct: 97 LLREVQLLKQL-DHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 153
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARILLGN 174
R + Q+LSG+ H+N IVHRDLKP NLL+ D +++ DFG L
Sbjct: 154 -------RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-----LST 201
Query: 175 EFDA 178
F+A
Sbjct: 202 HFEA 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCE 187
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK 429
Query: 188 PNAP 191
AP
Sbjct: 430 WTAP 433
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW 178
Query: 189 NAP 191
AP
Sbjct: 179 TAP 181
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVY------KGRRLSDNLIVA--LKEVHDYQS 57
P + H+ +Y+ +G G++ +V G+ + +I +K+ D +S
Sbjct: 13 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRG 117
RE++ L+ L + PN++ L+E+F ED+ ++ + T +KR D
Sbjct: 73 LLREVQLLKQL-DHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 129
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARILLGN 174
R + Q+LSG+ H+N IVHRDLKP NLL+ D +++ DFG L
Sbjct: 130 -------RIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-----LST 177
Query: 175 EFDA 178
F+A
Sbjct: 178 HFEA 181
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 90/175 (51%), Gaps = 15/175 (8%)
Query: 22 EILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQSAFREIEALQILQNSPNVVVL 77
++++ +G+G + +V+ G +++ VA+K + Q+ E ++ LQ+ +V L
Sbjct: 15 KLVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHD-KLVRL 72
Query: 78 HEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ +E E ++ EF+ + L + + D G + + + ++ + QI G+
Sbjct: 73 YAVVTKE-EPIYIITEFMAKGSLLDFL------KSDEGGK-VLLPKLIDFSAQIAEGMAY 124
Query: 137 CHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
R +HRDL+ N+L+ + + K+ADFG AR++ NE+ A +G P + AP
Sbjct: 125 IERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 179
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 216 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 271
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 272 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 323
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HR+L N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 324 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 190 AP 191
AP
Sbjct: 384 AP 385
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 34 DVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVL 92
+V+ G+ + +L++ + H + EI + L + +VV H +F ED D V +VL
Sbjct: 47 EVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQ-HVVGFHGFF--EDNDFVFVVL 100
Query: 93 EFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNL 152
E R + E K+R + ++ E + ++ QI+ G HRN ++HRDLK GNL
Sbjct: 101 ELCRRR---SLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 152
Query: 153 LIGDDGVLKLADFGQA 168
+ +D +K+ DFG A
Sbjct: 153 FLNEDLEVKIGDFGLA 168
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 34 DVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVL 92
+V+ G+ + +L++ + H + EI + L + +VV H +F ED D V +VL
Sbjct: 67 EVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQ-HVVGFHGFF--EDNDFVFVVL 120
Query: 93 EFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNL 152
E R + E K+R + ++ E + ++ QI+ G HRN ++HRDLK GNL
Sbjct: 121 ELCRR---RSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 172
Query: 153 LIGDDGVLKLADFGQA 168
+ +D +K+ DFG A
Sbjct: 173 FLNEDLEVKIGDFGLA 188
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 34 DVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVL 92
+V+ G+ + +L++ + H + EI + L + +VV H +F ED D V +VL
Sbjct: 43 EVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQ-HVVGFHGFF--EDNDFVFVVL 96
Query: 93 EFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNL 152
E R + E K+R + ++ E + ++ QI+ G HRN ++HRDLK GNL
Sbjct: 97 ELCRRR---SLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 148
Query: 153 LIGDDGVLKLADFGQA 168
+ +D +K+ DFG A
Sbjct: 149 FLNEDLEVKIGDFGLA 164
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 34 DVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVL 92
+V+ G+ + +L++ + H + EI + L + +VV H +F ED D V +VL
Sbjct: 43 EVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQ-HVVGFHGFF--EDNDFVFVVL 96
Query: 93 EFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNL 152
E R + E K+R + ++ E + ++ QI+ G HRN ++HRDLK GNL
Sbjct: 97 ELCRRR---SLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 148
Query: 153 LIGDDGVLKLADFGQA 168
+ +D +K+ DFG A
Sbjct: 149 FLNEDLEVKIGDFGLA 164
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 84/172 (48%), Gaps = 10/172 (5%)
Query: 22 EILECVGSGAYSDVYKGRRLSDNLIVALKEVHD-YQSAFREIEALQILQNSPNVVVLHEY 80
++++ +G+G + +V+ G + N VA+K + S +E QI++ + ++ Y
Sbjct: 12 QLIKRLGNGQFGEVWMGT-WNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLY 70
Query: 81 FWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
+E +V E++ + L + +D R + + + Q+ +G+ R
Sbjct: 71 AVVSEEPIYIVTEYMNKGSLLDFL-------KDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 140 NTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+HRDL+ N+L+G+ + K+ADFG AR++ NE A G P + AP
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAP 175
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 34 DVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVL 92
+V+ G+ + +L++ + H + EI + L + +VV H +F ED D V +VL
Sbjct: 65 EVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQ-HVVGFHGFF--EDNDFVFVVL 118
Query: 93 EFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNL 152
E R + E K+R + ++ E + ++ QI+ G HRN ++HRDLK GNL
Sbjct: 119 ELCRR---RSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 170
Query: 153 LIGDDGVLKLADFGQA 168
+ +D +K+ DFG A
Sbjct: 171 FLNEDLEVKIGDFGLA 186
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 258 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 313
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 314 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 365
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HR+L N L+G++ ++K+ADFG +R++ G+ + A G P +
Sbjct: 366 ISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 190 AP 191
AP
Sbjct: 426 AP 427
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQIL----QNSPNVV 75
KY E +G GA VY ++ VA+++++ Q +E+ +IL +PN+V
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIV 81
Query: 76 VLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
+ + DE V V+E+L L V+ E+ + G+I + L +
Sbjct: 82 NYLDSYLVGDELWV-VMEYLAGGSLTDVVTET----------CMDEGQIAAVCRECLQAL 130
Query: 135 DACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ H N ++HR++K N+L+G DG +KL DFG
Sbjct: 131 EFLHSNQVIHRNIKSDNILLGMDGSVKLTDFG 162
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q ++ VGT ++ APE++ +YG +VD+WSL
Sbjct: 171 QSKRSTMVGTPYWMAPEVV-TRKAYGPKVDIWSL 203
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G + +VY+G +L VA+K + + + +E ++ ++
Sbjct: 10 RTDITMKHKL----GGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 65
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ +S + Q
Sbjct: 66 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VSAVVLLYMATQ 117
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ A G P +
Sbjct: 118 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 190 AP 191
AP
Sbjct: 178 AP 179
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVY------KGRRLSDNLIVA--LKEVHDYQS 57
P + H+ +Y+ +G G++ +V G+ + +I +K+ D +S
Sbjct: 19 PGMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 78
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT--DLATVIAESKKKREDRGD 115
RE++ L+ L + PN++ L+E+F ED+ ++ + T +L I K+ E
Sbjct: 79 LLREVQLLKQL-DHPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA 135
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARILL 172
R I Q+LSG+ H+N IVHRDLKP NLL+ D +++ DFG L
Sbjct: 136 RIIR---------QVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-----L 181
Query: 173 GNEFDA 178
F+A
Sbjct: 182 STHFEA 187
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY+G +L VA+K + + + +E ++ ++
Sbjct: 17 RTDITMKHKL----GGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 72
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L RE ++ +L + E ++ ++ + Q
Sbjct: 73 H-PNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE-------VNAVVLLYMATQ 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ ++K+ADFG +R++ G+ A G P +
Sbjct: 125 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 190 AP 191
AP
Sbjct: 185 AP 186
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 22/180 (12%)
Query: 3 QPLPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA---- 58
Q P + + + Y+ ++ +GSGAY +V R ++ A+K + +
Sbjct: 21 QATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSN 80
Query: 59 ---FREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRG 114
E+ L++L + PN++ L+++F + + LV+E + +L I K E
Sbjct: 81 SKLLEEVAVLKLL-DHPNIMKLYDFF-EDKRNYYLVMECYKGGELFDEIIHRMKFNE--V 136
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLKLADFGQARIL 171
D + + Q+LSGV H++ IVHRDLKP NLL+ D ++K+ DFG + +
Sbjct: 137 DAAVIIK-------QVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL N+L+G++ V K+ADFG AR++ NE+ A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 15/136 (11%)
Query: 34 DVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVL 92
+V+ G+ + +L++ + H + EI + L + +VV H +F ED D V +VL
Sbjct: 41 EVFAGKIVPKSLLL---KPHQREKMSMEISIHRSLAHQ-HVVGFHGFF--EDNDFVFVVL 94
Query: 93 EFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNL 152
E R + E K+R + ++ E + ++ QI+ G HRN ++HRDLK GNL
Sbjct: 95 ELCRRR---SLLELHKRR-----KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 146
Query: 153 LIGDDGVLKLADFGQA 168
+ +D +K+ DFG A
Sbjct: 147 FLNEDLEVKIGDFGLA 162
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG R++ NE+ A G P +
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 189 NAP 191
AP
Sbjct: 349 TAP 351
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 204 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 252
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 253 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 190 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 238
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 239 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 21 YEILECVGSGAYS------DVYKGRRLSDNLIVALK-EVHDYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V G+ + +I K D+Q RE ++L++ PN
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH-PN 82
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLAT--VIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V LH+ E +L DL T + E RE + + + QIL
Sbjct: 83 IVRLHDSISEEGH------HYLIFDLVTGGELFEDIVAREYYSE-----ADASHCIQQIL 131
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
V CH+ +VHRDLKP NLL+ +KLADFG A
Sbjct: 132 EAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA 171
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 89/186 (47%), Gaps = 30/186 (16%)
Query: 6 PKSWSIHTRPEIIAKYEILECVGSGAYSDVY------KGRRLSDNLIVA--LKEVHDYQS 57
P + H+ +Y+ +G G++ +V G+ + +I +K+ D +S
Sbjct: 13 PGXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKES 72
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT--DLATVIAESKKKREDRGD 115
RE++ L+ L + PN+ L+E+F ED+ ++ + T +L I K+
Sbjct: 73 LLREVQLLKQL-DHPNIXKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKR------- 122
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARILL 172
S + R + Q+LSG+ H+N IVHRDLKP NLL+ D +++ DFG L
Sbjct: 123 --FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFG-----L 175
Query: 173 GNEFDA 178
F+A
Sbjct: 176 STHFEA 181
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 80/168 (47%), Gaps = 24/168 (14%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+Y++ E +G GA+S V + +L A K ++ D+Q RE ++L++S
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS- 63
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLAT--VIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V LH+ E +L DL T + E RE + S + QI
Sbjct: 64 NIVRLHDSISEEG------FHYLVFDLVTGGELFEDIVAREYYSEADAS-----HCIQQI 112
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQARILLGNE 175
L V CH+ +VHRDLKP NLL+ +KLADFG A + G++
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQ 160
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
+EI++ +G GA+ +V + + I A+K ++ ++ + FRE + + +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+ LH F E+ +++ ++ DL T++++ + K + R +GE+ +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR-FYIGEM-------VLA 187
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+D+ H+ VHRD+KP N+L+ +G ++LADFG
Sbjct: 188 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC 222
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQS--AFR-EIEALQILQ-NSP 72
Y IL+ +GSG S V++ I A+K V+ D Q+ ++R EI L LQ +S
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
++ L++Y D+ +V+E DL + + KKK D +R K + +L
Sbjct: 117 KIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNMLE 166
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQS--AFR-EIEALQILQ-NSP 72
Y IL+ +GSG S V++ I A+K V+ D Q+ ++R EI L LQ +S
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
++ L++Y D+ +V+E DL + + KKK D +R K + +L
Sbjct: 117 KIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNMLE 166
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 81/155 (52%), Gaps = 15/155 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ-------SAFREIEALQILQNSPN 73
+EI++ +G GA+ +V + + I A+K ++ ++ + FRE + + +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+ LH F E+ +++ ++ DL T++++ + K + R +GE+ +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMAR-FYIGEM-------VLA 203
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+D+ H+ VHRD+KP N+L+ +G ++LADFG
Sbjct: 204 IDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSC 238
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQS--AFR-EIEALQILQ-NSP 72
Y IL+ +GSG S V++ I A+K V+ D Q+ ++R EI L LQ +S
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
++ L++Y D+ +V+E DL + + KKK D +R K + +L
Sbjct: 117 KIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNMLE 166
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 167 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSP 72
+EI+ +G GA+ VYK + + A K E+ DY EIE L +
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY---IVEIEILATCDHPY 77
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V +L Y+ D +++EF I DRG++ +I+ Q+L
Sbjct: 78 IVKLLGAYY--HDGKLWIMIEFCPGGAVDAIMLEL-------DRGLTEPQIQVVCRQMLE 128
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ H I+HRDLK GN+L+ +G ++LADFG
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG 162
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQ 69
R +I K+++ G G Y +VY G +L VA+K + + + +E ++ ++
Sbjct: 31 RTDITMKHKL----GGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK 86
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+ PN+V L E ++ +L + E ++ ++ + Q
Sbjct: 87 H-PNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE-------VTAVVLLYMATQ 138
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
I S ++ + +HRDL N L+G++ V+K+ADFG +R++ G+ + A G P +
Sbjct: 139 ISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 198
Query: 190 AP 191
AP
Sbjct: 199 AP 200
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSP 72
+EI+ +G GA+ VYK + + A K E+ DY EIE L +
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDY---IVEIEILATCDHPY 69
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V +L Y+ D +++EF I DRG++ +I+ Q+L
Sbjct: 70 IVKLLGAYY--HDGKLWIMIEFCPGGAVDAIMLEL-------DRGLTEPQIQVVCRQMLE 120
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ H I+HRDLK GN+L+ +G ++LADFG
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFG 154
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE A G P +
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 189 NAP 191
AP
Sbjct: 172 TAP 174
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 65 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 113
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 114 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQS--AFR-EIEALQILQ-NSP 72
Y IL+ +GSG S V++ I A+K V+ D Q+ ++R EI L LQ +S
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
++ L++Y D+ +V+E DL + + KKK D +R K + +L
Sbjct: 70 KIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNMLE 119
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 120 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 154
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 81/156 (51%), Gaps = 20/156 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQS--AFR-EIEALQILQ-NSP 72
Y IL+ +GSG S V++ I A+K V+ D Q+ ++R EI L LQ +S
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
++ L++Y D+ +V+E DL + + KKK D +R K + +L
Sbjct: 89 KIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNMLE 138
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 139 AVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 64 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 112
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 113 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 65 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 113
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 114 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 65 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 113
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 114 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----------DYQSAFREIEALQILQN 70
Y IL+ +GSG S V++ I A+K V+ Y++ + LQ Q+
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 86
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
S ++ L++Y D+ +V+E DL + + KKK D +R K + +
Sbjct: 87 SDKIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNM 136
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
L V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI SG+ R VHRDL+ N+L+G++ V K+ADFG AR++ NE A G P +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 189 NAP 191
AP
Sbjct: 182 TAP 184
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 16/115 (13%)
Query: 61 EIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGIS 119
EIE L+ L N P ++ + +F + ED +VLE + +L + +K+ +E
Sbjct: 71 EIEILKKL-NHPCIIKIKNFF--DAEDYYIVLELMEGGELFDKVVGNKRLKE-------- 119
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARIL 171
K + Q+L V H N I+HRDLKP N+L+ +D ++K+ DFG ++IL
Sbjct: 120 -ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 91/171 (53%), Gaps = 23/171 (13%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDN------LIVALKEVHDYQSA------FREIEAL 65
I +E+L+ +G+GAY V+ R++S + + LK+ Q A E + L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 66 QILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIK 124
+ ++ SP +V LH Y ++ + L+L+++ +L T +++ ++ E E++
Sbjct: 113 EHIRQSPFLVTLH-YAFQTETKLHLILDYINGGELFTHLSQRERFTEH---------EVQ 162
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
++ +I+ ++ H+ I++RD+K N+L+ +G + L DFG ++ + +E
Sbjct: 163 IYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADE 213
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----------DYQSAFREIEALQILQN 70
Y IL+ +GSG S V++ I A+K V+ Y++ + LQ Q+
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 70
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
S ++ L++Y D+ +V+E DL + + KKK D +R K + +
Sbjct: 71 SDKIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNM 120
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
L V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 157
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 28/123 (22%)
Query: 59 FREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEF---------LRTDLATVIAESKKK 109
EI L++ ++ P V+ LHE + E +L+LE+ +LA +++E+
Sbjct: 76 LHEIAVLELAKSCPRVINLHEVYENTSE-IILILEYAAGGEIFSLCLPELAEMVSEN--- 131
Query: 110 REDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFG 166
++ R + QIL GV H+N IVH DLKP N+L+ G +K+ DFG
Sbjct: 132 ------------DVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFG 179
Query: 167 QAR 169
+R
Sbjct: 180 MSR 182
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ + + L VGSGAY V VA+K++ +QS +RE+ L+ L
Sbjct: 25 EVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHL 84
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F + + LV + DL ++ + +S +
Sbjct: 85 KHE-NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----------SQALSDEHV 133
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + Q+L G+ H I+HRDLKP N+ + +D L++ DFG AR
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G RQ +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 174 DFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 24/158 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----------DYQSAFREIEALQILQN 70
Y IL+ +GSG S V++ I A+K V+ Y++ + LQ Q+
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQ--QH 66
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
S ++ L++Y D+ +V+E DL + + KKK D +R K + +
Sbjct: 67 SDKIIRLYDYEIT-DQYIYMVMECGNIDLNSWL--KKKKSIDPWER-------KSYWKNM 116
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
L V H++ IVH DLKP N LI DG+LKL DFG A
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 153
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 13 TRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY-----QSAFREIEALQI 67
T+ +I Y + +G G++ +V + + A K++ Y +EIE ++
Sbjct: 20 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS 79
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
L + PN++ L+E F ++ D LV+E +L + + RE + R
Sbjct: 80 L-DHPNIIRLYETF-EDNTDIYLVMELCTGGELFERVVHKRVFRE---------SDAARI 128
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQA 168
M +LS V CH+ + HRDLKP N L D LKL DFG A
Sbjct: 129 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 173
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 13 TRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY-----QSAFREIEALQI 67
T+ +I Y + +G G++ +V + + A K++ Y +EIE ++
Sbjct: 3 TKGDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKS 62
Query: 68 LQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
L + PN++ L+E F ++ D LV+E +L + + RE + R
Sbjct: 63 L-DHPNIIRLYETF-EDNTDIYLVMELCTGGELFERVVHKRVFRE---------SDAARI 111
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQA 168
M +LS V CH+ + HRDLKP N L D LKL DFG A
Sbjct: 112 MKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+Y I+ +G G++ +V K + A+K ++ D + RE+E L+ L + P
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHP 81
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L E ED + ++ L T K+KR D R + Q+ S
Sbjct: 82 NIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFS 132
Query: 133 GVDACHRNTIVHRDLKPGNLLIGD---DGVLKLADFG 166
G+ H++ IVHRDLKP N+L+ D +K+ DFG
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG 169
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V K + LI+A K +H + + A R I LQ+L NSP +V
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 77
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ E+K+ E+ +G++ +++ L+ +
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE------ILGKVSIAVLRGLAYLR 131
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 132 EKHQ--IMHRDVKPSNILVNSRGEIKLCDFG 160
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 291 SCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + APE L G T Y ++ D+WS+ L
Sbjct: 172 SFVGTRSYMAPERLQG-THYSVQSDIWSMGLSL 203
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 11 IHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ--------SAFREI 62
I TR I +EI +G G + +VY R + IVALK + Q REI
Sbjct: 15 ILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREI 74
Query: 63 EALQILQNSPNVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVG 121
E +Q + PN++ L+ YF+ + L+LE+ R +L + +S E R
Sbjct: 75 E-IQAHLHHPNILRLYNYFY-DRRRIYLILEYAPRGELYKELQKSCTFDEQR-------- 124
Query: 122 EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
M ++ + CH ++HRD+KP NLL+G G LK+ADFG
Sbjct: 125 -TATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 24/160 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPN 73
Y++ E +G GA+S V + + + A K ++ D+Q RE ++L++ PN
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH-PN 91
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLAT--VIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V LH+ E +L DL T + E RE + + + QIL
Sbjct: 92 IVRLHDSISEEG------FHYLVFDLVTGGELFEDIVAREYYSE-----ADASHCIHQIL 140
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
V+ H++ IVHRDLKP NLL+ +KLADFG A
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA 180
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK------EVHDYQSAFREIEALQILQNSPNV 74
Y++ +G G++ +++G L +N VA+K + + +R + L PNV
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 70
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
YF +E VLV++ L L ++ D R SV + Q+L+ V
Sbjct: 71 Y----YFGQEGLHNVLVIDLLGPSLEDLL--------DLCGRKFSVKTVAMAAKQMLARV 118
Query: 135 DACHRNTIVHRDLKPGNLLIG-----DDGVLKLADFGQARI 170
+ H ++V+RD+KP N LIG + ++ + DFG +
Sbjct: 119 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 159
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 23/161 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK------EVHDYQSAFREIEALQILQNSPNV 74
Y++ +G G++ +++G L +N VA+K + + +R + L PNV
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV 71
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
YF +E VLV++ L L ++ D R SV + Q+L+ V
Sbjct: 72 Y----YFGQEGLHNVLVIDLLGPSLEDLL--------DLCGRKFSVKTVAMAAKQMLARV 119
Query: 135 DACHRNTIVHRDLKPGNLLIG-----DDGVLKLADFGQARI 170
+ H ++V+RD+KP N LIG + ++ + DFG +
Sbjct: 120 QSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 20/165 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+Y I+ +G G++ +V K + A+K ++ D + RE+E L+ L + P
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHP 81
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L E ED + ++ L T K+KR D R + Q+ S
Sbjct: 82 NIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFS 132
Query: 133 GVDACHRNTIVHRDLKPGNLLIGD---DGVLKLADFGQARILLGN 174
G+ H++ IVHRDLKP N+L+ D +K+ DFG + N
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+Y I+ +G G++ +V K + A+K ++ D + RE+E L+ L + P
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-DHP 81
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L E ED + ++ L T K+KR D R + Q+ S
Sbjct: 82 NIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------RIIKQVFS 132
Query: 133 GVDACHRNTIVHRDLKPGNLLIGD---DGVLKLADFG 166
G+ H++ IVHRDLKP N+L+ D +K+ DFG
Sbjct: 133 GITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFG 169
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 73/158 (46%), Gaps = 18/158 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQSAFREIEALQILQNSPNVVVL 77
+E+ +G GA S VY+ ++ + LK+ D + EI L L + PN++ L
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSH-PNIIKL 113
Query: 78 HEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
E F E + LVLE + +L I E E + QIL V
Sbjct: 114 KEIFETPTEIS-LVLELVTGGELFDRIVEKGYYSERDAADAVK---------QILEAVAY 163
Query: 137 CHRNTIVHRDLKPGNLLIGD---DGVLKLADFGQARIL 171
H N IVHRDLKP NLL D LK+ADFG ++I+
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 286 QGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
Q + + GT + APE+L G +YG EVD+WS+
Sbjct: 204 QVLMKTVCGTPGYCAPEILRGC-AYGPEVDMWSV 236
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-----DYQSAFREIEALQILQNSPNVV 75
Y+ILE +GSGA+ V++ + + K ++ D + EI + L + P ++
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHH-PKLI 111
Query: 76 VLHEYFWREDE-DAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
LH+ F ED+ + VL+LEFL +L IA D +S E+ +M Q G
Sbjct: 112 NLHDAF--EDKYEMVLILEFLSGGELFDRIAAE--------DYKMSEAEVINYMRQACEG 161
Query: 134 VDACHRNTIVHRDLKPGNLL--IGDDGVLKLADFGQARILLGNE 175
+ H ++IVH D+KP N++ +K+ DFG A L +E
Sbjct: 162 LKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE 205
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 77/181 (42%), Gaps = 27/181 (14%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-----------HDYQSAFREIEALQI 67
A+Y + +G G + V+ G RL+D L VA+K + D + E+ L
Sbjct: 31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWK 90
Query: 68 LQ---NSPNVVVLHEYFWREDEDAVLVLE--FLRTDLATVIAESKKKREDRGDRGISVGE 122
+ P V+ L ++F E +LVLE DL I E E G
Sbjct: 91 VGAGGGHPGVIRLLDWF-ETQEGFMLVLERPLPAQDLFDYITEKGPLGE---------GP 140
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG-DDGVLKLADFGQARILLGNEFDAPDG 181
+ + Q+++ + CH +VHRD+K N+LI G KL DFG +L + DG
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDG 200
Query: 182 N 182
Sbjct: 201 T 201
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 24/169 (14%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV------------HDYQSAFREIE 63
++I KY + + +G G+Y V + + D+ + + V + + +EI+
Sbjct: 2 KLIGKYLMGDLLGEGSYGKV---KEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQ 58
Query: 64 ALQILQNSPNVVVLHEYFWREDEDAV-LVLEFLRTDLATVIAESKKKREDRGDRGISVGE 122
L+ L++ NV+ L + + E++ + +V+E+ + ++ +KR V +
Sbjct: 59 LLRRLRHK-NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR-------FPVCQ 110
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ Q++ G++ H IVH+D+KPGNLL+ G LK++ G A L
Sbjct: 111 AHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 85/160 (53%), Gaps = 20/160 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSP 72
+EIL +G G++ V ++ + A+K E ++ ++ F+E++ +Q L++ P
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH-P 75
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V L Y ++++ED +V++ L DL + ++ +E+ +K ++ +++
Sbjct: 76 FLVNLW-YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE---------TVKLFICELV 125
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+D I+HRD+KP N+L+ + G + + DF A +L
Sbjct: 126 MALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAML 165
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQN 70
+ KY L+ +G G++ + D +KE++ + + + RE+ L +++
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGE--IKRWM 127
PN+V E F E+ +V+++ DL I +G+ E I W
Sbjct: 83 -PNIVQYRESF-EENGSLYIVMDYCEGGDLFKRI---------NAQKGVLFQEDQILDWF 131
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
VQI + H I+HRD+K N+ + DG ++L DFG AR+L
Sbjct: 132 VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 24/161 (14%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN-----LIVALKEV--HDYQSAFREIEALQILQNSP 72
+Y++ E +G GA+S V + ++ +I+ K++ D+Q RE ++L++ P
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH-P 70
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLAT--VIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V LH+ E +L DL T + E RE + + + QI
Sbjct: 71 NIVRLHDSISEEGH------HYLIFDLVTGGELFEDIVAREYYSE-----ADASHCIQQI 119
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDD---GVLKLADFGQA 168
L V CH+ +VHR+LKP NLL+ +KLADFG A
Sbjct: 120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA 160
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ + + L VGSGAY V VA+K++ +QS +RE+ L+ L
Sbjct: 25 EVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHL 84
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F + + LV + DL ++ + +S +
Sbjct: 85 KHE-NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----------CQALSDEHV 133
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + Q+L G+ H I+HRDLKP N+ + +D L++ DFG AR
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR 179
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G RQ +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 174 DFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 219
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHE 79
E +G GAY+ V L + A+K + H FRE+E L Q + N++ L E
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 80 YFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
+F ++D L F + +++A +K++ + E R + + + +D H
Sbjct: 79 FF---EDDTRFYLVFEKLQGGSILAHIQKQKH------FNEREASRVVRDVAAALDFLHT 129
Query: 140 NTIVHRDLKPGNLL 153
I HRDLKP N+L
Sbjct: 130 KGIAHRDLKPENIL 143
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 16/164 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 70
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 124
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL---LGNEF 176
H+ I+HRD+KP N+L+ G +KL DFG + L + NEF
Sbjct: 125 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEF 166
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 21/151 (13%)
Query: 25 ECVGS-GAYSDVYKGRRLSDNLIVALK--------EVHDYQSAFREIEALQILQNSPNVV 75
E +G G + VYK + +++ A K E+ DY EI+ L + PN+V
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV---EIDILASC-DHPNIV 70
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
L + F+ E+ +L+ + V+ E +R ++ +I+ Q L ++
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLEL--------ERPLTESQIQVVCKQTLDALN 122
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H N I+HRDLK GN+L DG +KLADFG
Sbjct: 123 YLHDNKIIHRDLKAGNILFTLDGDIKLADFG 153
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 70 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 129
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 183
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 212
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 223 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 255
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 13/157 (8%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD--YQSAFREIEA-LQILQN--SPNVVVLHEYF 81
+GSGA+ DV+ S L +K ++ Q +IEA +++L++ PN++ + E F
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
ED + ++ + T + E + RG + +S G + M Q+++ + H
Sbjct: 90 --EDYHNMYIV--METCEGGELLERIVSAQARG-KALSEGYVAELMKQMMNALAYFHSQH 144
Query: 142 IVHRDLKPGNLLIGD---DGVLKLADFGQARILLGNE 175
+VH+DLKP N+L D +K+ DFG A + +E
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 21 YEILECVGSGAYSDVYK--GRRLSDNLIVALKEVHDYQSA--------FREIEALQILQN 70
YE+ E +G G +S V + R V + +V + S+ RE +L++
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI--KRWMV 128
P++V L E + D +L + F D A + E K R D G E +M
Sbjct: 86 -PHIVELLETY---SSDGMLYMVFEFMDGADLCFEIVK----RADAGFVYSEAVASHYMR 137
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARILLG 173
QIL + CH N I+HRD+KP +L+ + +KL FG A I LG
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLG 184
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 21 YEILECVGSGAYSDVYK--GRRLSDNLIVALKEVHDYQSA--------FREIEALQILQN 70
YE+ E +G G +S V + R V + +V + S+ RE +L++
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI--KRWMV 128
P++V L E + D +L + F D A + E K R D G E +M
Sbjct: 88 -PHIVELLETY---SSDGMLYMVFEFMDGADLCFEIVK----RADAGFVYSEAVASHYMR 139
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQARILLG 173
QIL + CH N I+HRD+KP +L+ + +KL FG A I LG
Sbjct: 140 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLG 186
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 20/161 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEV----HDYQSAFREIEALQILQNSP--- 72
+Y+I++ +G G S VY N+ VA+K + + + + E + + NS
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE--REVHNSSQLS 69
Query: 73 --NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N+V + + ED+ LV+E++ + ES +SV + QI
Sbjct: 70 HQNIVSMID-VDEEDDCYYLVMEYIEGPTLSEYIESHGP--------LSVDTAINFTNQI 120
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
L G+ H IVHRD+KP N+LI + LK+ DFG A+ L
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL 161
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 23/166 (13%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQS------AFREIEALQIL 68
E+ + + L VGSGAY V VA+K++ +QS +RE+ L+ L
Sbjct: 17 EVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHL 76
Query: 69 QNSPNVVVLHEYF-----WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
++ NV+ L + F + + LV + DL ++ + +S +
Sbjct: 77 KHE-NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----------CQALSDEHV 125
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + Q+L G+ H I+HRDLKP N+ + +D L++ DFG AR
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR 171
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 280 DGGDGRQG--ALTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
D G RQ +T V TRW+RAPE++ Y VD+WS+ +
Sbjct: 166 DFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 211
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 70/242 (28%)
Query: 20 KYEILECVGSGAYS------DVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSP 72
KY + + +G+G++ D+ G+R ALK+V D + RE++ +++L +
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRF------ALKKVLQDPRYKNRELDIMKVLDHV- 60
Query: 73 NVVVLHEYFW-------------------------------------REDEDAVLVLEFL 95
N++ L +YF+ +++ +++E++
Sbjct: 61 NIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 96 RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG 155
L V+ K R R I + I ++ Q+ V H I HRD+KP NLL+
Sbjct: 121 PDTLHKVL-----KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
Query: 156 D-DGVLKLADFGQARILLGNEFDAPDGNSQPCEPN-APYQDNMSEAPQVDLEVEDASPEG 213
D LKL DFG A+ L+ P EP+ A AP++ L + +P
Sbjct: 176 SKDNTLKLCDFGSAKKLI------------PSEPSVAXICSRFYRAPELMLGATEYTPSI 223
Query: 214 DV 215
D+
Sbjct: 224 DL 225
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 22/32 (68%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
+ + +R++RAPEL+ G+T Y +DLWS+
Sbjct: 199 VAXICSRFYRAPELMLGATEYTPSIDLWSIGC 230
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 75/161 (46%), Gaps = 21/161 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSPNVVVLHE 79
++ +E +GSG + V+K + D +K V ++ + A RE++AL L + +V +
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVN--IVHYN 70
Query: 80 YFW--------------REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
W + L ++ D T+ +K+R ++ D+ +++
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLAL----E 126
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
QI GVD H +++RDLKP N+ + D +K+ DFG
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFG 167
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA-----------FREIEALQIL 68
+Y+ ++ +GSGAY +V + D L A + + + + E+ L+ L
Sbjct: 5 RYQRVKKLGSGAYGEVLLCK---DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ PN++ L+E+F + + LV+E R +L I +K E + I M
Sbjct: 62 -DHPNIMKLYEFF-EDKRNYYLVMEVYRGGELFDEIILRQKFSE------VDAAVI---M 110
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFG 166
Q+LSG H++ IVHRDLKP NLL+ D ++K+ DFG
Sbjct: 111 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFG 152
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 121
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 150
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 161 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 193
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 121
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 150
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 161 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 193
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 121
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 150
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 161 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 193
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVV 76
LE +GSG + V+K + D I A+K D Q+A RE+ A +L +VV
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV- 72
Query: 77 LHEYF--WREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
YF W ED+ ++ E+ LA I+E+ R E+K ++Q+ G
Sbjct: 73 --RYFSAWAEDDHMLIQNEYCNGGSLADAISENY-----RIMSYFKEAELKDLLLQVGRG 125
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGV 159
+ H ++VH D+KP N+ I +
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFISRTSI 151
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 94
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 148
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 149 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 177
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 188 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 220
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVV 76
LE +GSG + V+K + D I A+K D Q+A RE+ A +L +VV
Sbjct: 14 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV- 72
Query: 77 LHEYF--WREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
YF W ED+ ++ E+ LA I+E+ R E+K ++Q+ G
Sbjct: 73 --RYFSAWAEDDHMLIQNEYCNGGSLADAISENY-----RIMSYFKEAELKDLLLQVGRG 125
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGV 159
+ H ++VH D+KP N+ I +
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFISRTSI 151
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 29/162 (17%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA-----------FREIEALQIL 68
+Y+ ++ +GSGAY +V + D L A + + + + E+ L+ L
Sbjct: 22 RYQRVKKLGSGAYGEVLLCK---DKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
+ PN++ L+E+F + + LV+E R +L I +K E + I M
Sbjct: 79 -DHPNIMKLYEFF-EDKRNYYLVMEVYRGGELFDEIILRQKFSE------VDAAVI---M 127
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFG 166
Q+LSG H++ IVHRDLKP NLL+ D ++K+ DFG
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFG 169
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVV 76
LE +GSG + V+K + D I A+K D Q+A RE+ A +L +VV
Sbjct: 12 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV- 70
Query: 77 LHEYF--WREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
YF W ED+ ++ E+ LA I+E+ R E+K ++Q+ G
Sbjct: 71 --RYFSAWAEDDHMLIQNEYCNGGSLADAISENY-----RIMSYFKEAELKDLLLQVGRG 123
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGV 159
+ H ++VH D+KP N+ I +
Sbjct: 124 LRYIHSMSLVHMDIKPSNIFISRTSI 149
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 18/146 (12%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSPNVVV 76
LE +GSG + V+K + D I A+K D Q+A RE+ A +L +VV
Sbjct: 16 LEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVV- 74
Query: 77 LHEYF--WREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
YF W ED+ ++ E+ LA I+E+ R E+K ++Q+ G
Sbjct: 75 --RYFSAWAEDDHMLIQNEYCNGGSLADAISENY-----RIMSYFKEAELKDLLLQVGRG 127
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGV 159
+ H ++VH D+KP N+ I +
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFISRTSI 153
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 47 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 100
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
Query: 162 LADFGQARILLGNEFD 177
L DFG A+ G ++D
Sbjct: 161 LTDFGFAKETTGEKYD 176
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 121
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 150
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 161 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 193
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 67
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 121
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 150
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 161 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 193
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIV--ALKEVHDYQSA------FREIEALQILQNSPNVVV 76
+ +G G + V K R D L + A+K + +Y S E+E L L + PN++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 77 L--------HEYFWREDEDAVLVLEFLR------TDLATVIAESKKKREDRGDRGISVGE 122
L + Y E +L+FLR TD A IA S +S +
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST-------LSSQQ 133
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + + G+D + +HRDL N+L+G++ V K+ADFG +R
Sbjct: 134 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALK-----EVHDYQSAFREIEALQILQNSPNV 74
+ + + G ++ VY+ + + ALK E ++ +E+ ++ L PN+
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 75 VVL--HEYFWREDEDAVLVLEFLRTDLAT-VIAESKKKREDRGDRGISVGEIKRWMVQIL 131
V +E+ D L T+L + E KK E RG +S + + Q
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP--LSCDTVLKIFYQTC 146
Query: 132 SGVDACHRNT--IVHRDLKPGNLLIGDDGVLKLADFGQA 168
V HR I+HRDLK NLL+ + G +KL DFG A
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIV--ALKEVHDYQSA------FREIEALQILQNSPNVVV 76
+ +G G + V K R D L + A+K + +Y S E+E L L + PN++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 77 L--------HEYFWREDEDAVLVLEFLR------TDLATVIAESKKKREDRGDRGISVGE 122
L + Y E +L+FLR TD A IA S +S +
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST-------LSSQQ 143
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + + G+D + +HRDL N+L+G++ V K+ADFG +R
Sbjct: 144 LLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI G+ + +HRDL+ N+L+ V K+ADFG AR++ NE+ A +G P +
Sbjct: 119 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 178
Query: 189 NAPYQDNM 196
AP N
Sbjct: 179 TAPEAINF 186
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI G+ + +HRDL+ N+L+ V K+ADFG AR++ NE+ A +G P +
Sbjct: 292 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW 351
Query: 189 NAPYQDNM 196
AP N
Sbjct: 352 TAPEAINF 359
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-DYQSAFRE--IEALQILQ--NSPNVV 75
+E + +G+G V+K L++A K +H + + A R I LQ+L NSP +V
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIV 86
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ F+ + E ++ + L V+ ++ + E +G++ +++ L+ +
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQ------ILGKVSIAVIKGLTYLR 140
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H+ I+HRD+KP N+L+ G +KL DFG
Sbjct: 141 EKHK--IMHRDVKPSNILVNSRGEIKLCDFG 169
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
S VGTR + +PE L G T Y ++ D+WS+ L
Sbjct: 180 NSFVGTRSYMSPERLQG-THYSVQSDIWSMGLSL 212
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 27 VGSGAYSDVYKGRR-----LSDNLIVALKEVH-----DYQSAFREIEALQILQNSPNVV- 75
+G GA+ V++ R +VA+K + D Q+ F+ AL ++PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 76 ------------VLHEYFWREDEDAVLVLEFLRTDLATVIAE-------SKKKREDRGDR 116
+L EY D + EFLR+ + ++ + G
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLN-----EFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 117 GISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
+S E Q+ +G+ VHRDL N L+G++ V+K+ADFG +R + ++
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY 229
Query: 177 DAPDGN 182
DGN
Sbjct: 230 YKADGN 235
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVH---DYQSAFREIEALQILQNS---PNVVVLHEY 80
+G GAY V K R + I+A+K + + Q R + L I + P V +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 81 FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACH 138
+RE D + +E + T L K + D+G ++ E + + V I+ ++ H
Sbjct: 119 LFREG-DVWICMELMDTSL-------DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 170
Query: 139 -RNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQP 185
+ +++HRD+KP N+LI G +K+ DFG + L+ + D +P
Sbjct: 171 SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKP 218
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+YE+ E +G G S+V+ R L D+ VA+K + + FR N P
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 73 NVVVLHEYFWREDEDAVL---VLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+V +++ E L V+E++ I ++ + R I V +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK--RAIEV------IAD 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
++ H+N I+HRD+KP N+LI +K+ DFG AR +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI 166
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA---FREIEALQILQNSPNVVVLHEYFWR 83
+GSG + V+ G L+ + VA+K + + + F E + + + P +V L+
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-L 72
Query: 84 EDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM-VQILSGVDACHRNTI 142
E LV EF+ + R RG+ E M + + G+ ++
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--------RTQRGLFAAETLLGMCLDVCEGMAYLEEASV 124
Query: 143 VHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+HRDL N L+G++ V+K++DFG R +L +++ + G P + +P
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Query: 27 VGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWRE 84
+GSG + V+ G L+ + I +KE + F E + + + P +V L+ E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG-VCLE 93
Query: 85 DEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM-VQILSGVDACHRNTIV 143
LV EF+ + R RG+ E M + + G+ ++
Sbjct: 94 QAPICLVFEFMEHGCLSDYL--------RTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 145
Query: 144 HRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
HRDL N L+G++ V+K++DFG R +L +++ + G P + +P
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD-------YQSAFREIEALQILQNSPNVVVLH- 78
+G G++ VYKG + VA E+ D Q E E L+ LQ+ PN+V +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQH-PNIVRFYD 92
Query: 79 --EYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
E + + VLV E + L T + K + + ++ W QIL G+
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXK---------IKVLRSWCRQILKGLQ 143
Query: 136 ACHRNT--IVHRDLKPGNLLI-GDDGVLKLADFGQ--------ARILLGN-EFDAPD 180
H T I+HRDLK N+ I G G +K+ D G A+ ++G EF AP+
Sbjct: 144 FLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPE 200
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 45 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 98
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 99 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 158
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + ++PC
Sbjct: 159 LTDFGFAK-----ETTSHNSLTEPC 178
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE+
Sbjct: 101 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 160
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 161 AREGAKFPIKWTAP 174
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE+ A +G P +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 189 NAP 191
AP
Sbjct: 177 TAP 179
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA---FREIEALQILQNSPNVVVLHEYFWR 83
+GSG + V+ G L+ + VA+K + + + F E + + + P +V L+
Sbjct: 15 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG-VCL 72
Query: 84 EDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM-VQILSGVDACHRNTI 142
E LV EF+ + R RG+ E M + + G+ +
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--------RTQRGLFAAETLLGMCLDVCEGMAYLEEACV 124
Query: 143 VHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+HRDL N L+G++ V+K++DFG R +L +++ + G P + +P
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD---YQSAFREIEALQILQNSPNVVVLHEYFWR 83
+GSG + V+ G L+ + VA+K + + + F E + + + P +V L+
Sbjct: 13 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG-VCL 70
Query: 84 EDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM-VQILSGVDACHRNTI 142
E LV EF+ + R RG+ E M + + G+ +
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL--------RTQRGLFAAETLLGMCLDVCEGMAYLEEACV 122
Query: 143 VHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+HRDL N L+G++ V+K++DFG R +L +++ + G P + +P
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE+
Sbjct: 111 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 170
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 171 AREGAKFPIKWTAP 184
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 21/164 (12%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH---DYQSAFREIEALQILQNS 71
P + K+ + +GSG++ ++Y G + N VA+K + + E + +ILQ
Sbjct: 3 PRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGG 62
Query: 72 ---PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
PNV +F E + VLV++ L L + +K +S+ +
Sbjct: 63 TGIPNV----RWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--------LSLKTVLMLAD 110
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQAR 169
Q+++ V+ H + +HRD+KP N L+G + + DFG A+
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK 154
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE+
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 171
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 172 AREGAKFPIKWTAP 185
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD---YQSAFREIEALQILQNSPNVVVLHEYFWR 83
+GSG + V+ G L+ + VA+K + + + F E + + + P +V L+
Sbjct: 18 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-L 75
Query: 84 EDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM-VQILSGVDACHRNTI 142
E LV EF+ + R RG+ E M + + G+ +
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL--------RTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127
Query: 143 VHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+HRDL N L+G++ V+K++DFG R +L +++ + G P + +P
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 176
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 27/168 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVAL------KEVHDYQSAFREIEALQILQNSP 72
A+ + E +G G + VY+ + D + V +++ R+ L + P
Sbjct: 7 AELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N++ L +E + LV+EF R + K+ D + W VQI
Sbjct: 67 NIIALRGVCLKE-PNLCLVMEFARGGPLNRVLSGKRIPPDI---------LVNWAVQIAR 116
Query: 133 GVDACHRNTIV---HRDLKPGNLLI------GD--DGVLKLADFGQAR 169
G++ H IV HRDLK N+LI GD + +LK+ DFG AR
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 36/175 (20%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSPNVVVLH- 78
++ +E +GSG + V+K + D ++ V ++ + A RE++AL L + V ++H
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDH---VNIVHY 70
Query: 79 -------EYFWREDEDAV--------------------LVLEFLRTDLATVIAESKKKRE 111
+Y +D++ L ++ D T+ +K+R
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 112 DRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ D+ +++ QI GVD H ++HRDLKP N+ + D +K+ DFG
Sbjct: 131 EKLDKVLAL----ELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFG 181
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYS-------------------DVYKGRRLSDNL 45
LP S S H E YE E +G G S DV G S
Sbjct: 6 LPGSHSTHGFYE---NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE 62
Query: 46 IVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIA 104
+ L+E + +E++ L+ + PN++ L + + + LV + ++ +L +
Sbjct: 63 VQELRE-----ATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLT 116
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLAD 164
E +S E ++ M +L + A H+ IVHRDLKP N+L+ DD +KL D
Sbjct: 117 EKVT---------LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 165 FG 166
FG
Sbjct: 168 FG 169
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE+
Sbjct: 116 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 175
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 176 AREGAKFPIKWTAP 189
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIV--ALKEVHDYQSA------FREIEALQILQNSPNVVV 76
+ +G G + V K R D L + A+K + +Y S E+E L L + PN++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 77 L--------HEYFWREDEDAVLVLEFLR------TDLATVIAESKKKREDRGDRGISVGE 122
L + Y E +L+FLR TD A IA S +S +
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST-------LSSQQ 140
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + + G+D + +HR+L N+L+G++ V K+ADFG +R
Sbjct: 141 LLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 38/182 (20%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYS-------------------DVYKGRRLSDNL 45
LP S S H E YE E +G G S DV G S
Sbjct: 6 LPGSHSTHGFYE---NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE 62
Query: 46 IVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIA 104
+ L+E + +E++ L+ + PN++ L + + + LV + ++ +L +
Sbjct: 63 VQELRE-----ATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLT 116
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLAD 164
E +S E ++ M +L + A H+ IVHRDLKP N+L+ DD +KL D
Sbjct: 117 EKVT---------LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTD 167
Query: 165 FG 166
FG
Sbjct: 168 FG 169
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 11/112 (9%)
Query: 56 QSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRG 114
++ +E++ L+ + PN++ L + + + LV + ++ +L + E
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTY-ETNTFFFLVFDLMKKGELFDYLTEKVT------ 107
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+S E ++ M +L + A H+ IVHRDLKP N+L+ DD +KL DFG
Sbjct: 108 ---LSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 156
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 31/174 (17%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQNSPN- 73
A+Y ++ +G G +S V+ + + +N VA+K V ++A EI+ LQ + ++ N
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 74 ---------VVVLHEYFWREDEDA---VLVLEFLRTDLATVIAESKKKREDRGDRGISVG 121
++ L ++F + + V+V E L +L +I KK E RG I V
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI----KKYEHRGIPLIYVK 134
Query: 122 EIKRWMVQILSGVDACHRNT-IVHRDLKPGNLLI------GDDGVLKLADFGQA 168
+I + Q+L G+D HR I+H D+KP N+L+ + +K+AD G A
Sbjct: 135 QISK---QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E++ D+ + + +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGR----FSEPHARFYA 147
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +K+ADFG A+ + G
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 84/166 (50%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E++ D+ + + +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYMPGGDMFSHL-----RRIGR----FSEPHARFYA 147
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +K+ADFG A+ + G
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 87/174 (50%), Gaps = 31/174 (17%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHD----YQSAFREIEALQILQNSPN- 73
A+Y ++ +G G +S V+ + + +N VA+K V ++A EI+ LQ + ++ N
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 74 ---------VVVLHEYFWREDEDA---VLVLEFLRTDLATVIAESKKKREDRGDRGISVG 121
++ L ++F + + V+V E L +L +I KK E RG I V
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI----KKYEHRGIPLIYVK 134
Query: 122 EIKRWMVQILSGVDACHRNT-IVHRDLKPGNLLI------GDDGVLKLADFGQA 168
+I + Q+L G+D HR I+H D+KP N+L+ + +K+AD G A
Sbjct: 135 QISK---QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+YE+ E +G G S+V+ R L D+ VA+K + + FR N P
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 73 NVVVLHEYFWREDEDAVL---VLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+V +++ E L V+E++ I ++ + R I V +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK--RAIEV------IAD 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
++ H+N I+HRD+KP N++I +K+ DFG AR +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 18/162 (11%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+YE+ E +G G S+V+ R L D+ VA+K + + FR N P
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 73 NVVVLHEYFWREDEDAVL---VLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+V +++ E L V+E++ I ++ + R I V +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK--RAIEV------IAD 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
++ H+N I+HRD+KP N++I +K+ DFG AR +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 46 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 99
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 100 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 159
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 160 LTDFGFAK-----ETTSHNSLTTPC 179
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--------DYQSAFREIEALQILQ 69
I +E + +G G++ V R + A+K + D + E L + +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P + L F D V+EF+ DL I +S++ E R + +
Sbjct: 82 NHPFLTQLFCCFQTPDR-LFFVMEFVNGGDLMFHIQKSRRFDEARA---------RFYAA 131
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S + H I++RDLK N+L+ +G KLADFG +
Sbjct: 132 EIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 45 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 98
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 99 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 158
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 159 LTDFGFAK-----ETTSHNSLTTPC 178
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 61 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 114
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 115 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 174
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 175 LTDFGFAK-----ETTSHNSLTTPC 194
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEA--LQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N VA+K + + + E L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N+LI + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK ++D A +E++ P++V + +E ++++E +
Sbjct: 39 ALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG------G 92
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + ++RGD+ + E M I + + H + I HRD+KP NLL D VLK
Sbjct: 93 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLK 152
Query: 162 LADFGQARILLGNEFDAP 179
L DFG A+ N P
Sbjct: 153 LTDFGFAKETTQNALQTP 170
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 19/170 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV------HDYQSA 58
LP ++ PE + + LE +G G++ +V+KG +VA+K + + +
Sbjct: 10 LPGMQNLKADPEEL--FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI 67
Query: 59 FREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI 118
+EI L +SP V + + + D +++E+L A + E E
Sbjct: 68 QQEITVLSQC-DSPYVTKYYGSYLK-DTKLWIIMEYLGGGSALDLLEPGPLDET------ 119
Query: 119 SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+I + +IL G+D H +HRD+K N+L+ + G +KLADFG A
Sbjct: 120 ---QIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 53 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 106
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 107 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 166
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 167 LTDFGFAK-----ETTSHNSLTTPC 186
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 52 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 105
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 106 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 165
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 166 LTDFGFAK-----ETTSHNSLTTPC 185
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 51 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 104
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 105 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 164
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 165 LTDFGFAK-----ETTSHNSLTTPC 184
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 17/168 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVH---DYQSAFREIEALQILQNS---PNVVVLHEY 80
+G GAY V K R + I+A+K + + Q R + L I + P V +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 81 FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACH 138
+RE D + +E + T L K + D+G ++ E + + V I+ ++ H
Sbjct: 75 LFREG-DVWICMELMDTSL-------DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 126
Query: 139 -RNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQP 185
+ +++HRD+KP N+LI G +K+ DFG + L+ + D +P
Sbjct: 127 SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKP 174
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 47 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 100
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 161 LTDFGFAK-----ETTSHNSLTTPC 180
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK ++D A +E++ P++V + +E ++++E +
Sbjct: 58 ALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEG------G 111
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + ++RGD+ + E M I + + H + I HRD+KP NLL D VLK
Sbjct: 112 ELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLK 171
Query: 162 LADFGQARILLGNEFDAP 179
L DFG A+ N P
Sbjct: 172 LTDFGFAKETTQNALQTP 189
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 97 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 150
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 151 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 210
Query: 162 LADFGQARILLGNEFDAPDGNSQPCEPNAPY 192
L DFG A+ E + + + PC PY
Sbjct: 211 LTDFGFAK-----ETTSHNSLTTPC--YTPY 234
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 91 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 144
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 145 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 204
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 205 LTDFGFAK-----ETTSHNSLTTPC 224
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHD---YQSAFREIEALQILQNSPNVVVLHEYFWR 83
+GSG + V+ G L+ + VA+K + + + F E + + + P +V L+
Sbjct: 16 IGSGQFGLVHLGYWLNKDK-VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC-L 73
Query: 84 EDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWM-VQILSGVDACHRNTI 142
E LV EF+ + R RG+ E M + + G+ +
Sbjct: 74 EQAPICLVTEFMEHGCLSDYL--------RTQRGLFAAETLLGMCLDVCEGMAYLEEACV 125
Query: 143 VHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+HRDL N L+G++ V+K++DFG R +L +++ + G P + +P
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 174
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 65/145 (44%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V+E L
Sbjct: 47 ALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG------G 100
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E M I + H I HRD+KP NLL + +LK
Sbjct: 101 ELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 160
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 161 LTDFGFAK-----ETTSHNSLTTPC 180
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 24/161 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFR------EIEALQILQNSPNV 74
+ +E +GSGA+S+V+ ++ + ALK + AFR EI L+ +++ N+
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSLENEIAVLKKIKHE-NI 68
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRG-DRGISVGEIKRWMVQ-ILS 132
V L E + LV++ + S + DR +RG+ + ++Q +LS
Sbjct: 69 VTL-EDIYESTTHYYLVMQLV----------SGGELFDRILERGVYTEKDASLVIQQVLS 117
Query: 133 GVDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARI 170
V H N IVHRDLKP NLL ++ + + DFG +++
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +K+ADFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 193
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 113
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 114 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 162
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 163 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 194
Score = 31.2 bits (69), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V +R+F+ PELL Y +D+WSL
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLG 234
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLL 92
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 141
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Score = 31.2 bits (69), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V +R+F+ PELL Y +D+WSL
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLG 213
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 93
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 94 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 142
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
Score = 31.2 bits (69), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V +R+F+ PELL Y +D+WSL
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLG 214
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 141
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Score = 31.2 bits (69), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V +R+F+ PELL Y +D+WSL
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLG 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + S+ K E + + +I R Q G+D H +
Sbjct: 77 STKPQLAIVTQWCEGSSLYHHLHASETKFEMK-----KLIDIAR---QTARGMDYLHAKS 128
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATV 157
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 141
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V +R+F+ PELL Y +D+WSL
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLG 213
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 141
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
V +R+F+ PELL Y +D+WSL
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLG 213
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 26/166 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEY 80
+E + +G GA+ V K R D+ A+K++ + I + +L S N + Y
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 81 F--WREDEDAV-------------LVLEFL--RTDLATVIAESKKKREDRGDRGISVGEI 123
+ W E + V + +E+ RT + +E+ ++ D E
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD---------EY 118
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R QIL + H I+HRDLKP N+ I + +K+ DFG A+
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
G LTS +GT + A E+L G+ Y ++D++SL
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEV------HDYQSAFREIEALQILQNSPNVVVL 77
LE +G G++ +V+KG +VA+K + + + +EI L +SP V
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKY 90
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + D +++E+L A + E E +I + +IL G+D
Sbjct: 91 YGSYLK-DTKLWIIMEYLGGGSALDLLEPGPLDET---------QIATILREILKGLDYL 140
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
H +HRD+K N+L+ + G +KLADFG A
Sbjct: 141 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 29/169 (17%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNS 71
+ +E ++C+G G + V++ + D+ A+K + + RE++AL L++
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH- 62
Query: 72 PNVVVLHEYF--WREDE-------DAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE 122
P +V YF W E + V +++ L K+ +D + ++ E
Sbjct: 63 PGIV---RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLC-----RKENLKDWMNGRCTIEE 114
Query: 123 IKR-----WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+R +QI V+ H ++HRDLKP N+ D V+K+ DFG
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 163
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
T VGT+ + +PE ++G+ SY +VD++SL L
Sbjct: 188 TGQVGTKLYMSPEQIHGN-SYSHKVDIFSLGLIL 220
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 62
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 63 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 111
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 112 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HR+L+ N+L+ D K+ADFG AR++ NE+
Sbjct: 102 LTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT 161
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 162 AREGAKFPIKWTAP 175
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEV------HDYQSAFREIEALQILQNSPNVVVL 77
LE +G G++ +V+KG +VA+K + + + +EI L +SP V
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKY 70
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + D +++E+L A + E E +I + +IL G+D
Sbjct: 71 YGSYLK-DTKLWIIMEYLGGGSALDLLEPGPLDET---------QIATILREILKGLDYL 120
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
H +HRD+K N+L+ + G +KLADFG A
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + S+ K E + + +I R Q G+D H +
Sbjct: 89 STKPQLAIVTQWCEGSSLYHHLHASETKFEMK-----KLIDIAR---QTARGMDYLHAKS 140
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+HRDLK N+ + +D +K+ DFG A
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 94
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 95 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 143
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 144 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 175
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
V +R+F+ PELL Y +D+WSL
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGC 216
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 17/151 (11%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEV------HDYQSAFREIEALQILQNSPNVVVL 77
LE +G G++ +V+KG +VA+K + + + +EI L +SP V
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKY 70
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + D +++E+L A + E E +I + +IL G+D
Sbjct: 71 YGSYLK-DTKLWIIMEYLGGGSALDLLEPGPLDET---------QIATILREILKGLDYL 120
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
H +HRD+K N+L+ + G +KLADFG A
Sbjct: 121 HSEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE A +G P +
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 189 NAP 191
AP
Sbjct: 178 TAP 180
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE A +G P +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 189 NAP 191
AP
Sbjct: 177 TAP 179
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 24/165 (14%)
Query: 16 EIIAKYEILECVGSGAYSDVYK--GRRLSDNLIVALKEVHD-----------YQSAFREI 62
E KY+ + +G G S V + R V + EV ++ RE
Sbjct: 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150
Query: 63 EALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVG 121
L+ + P+++ L + + LV + +R +L + E +S
Sbjct: 151 HILRQVAGHPHIITLIDSY-ESSSFMFLVFDLMRKGELFDYLTEKV---------ALSEK 200
Query: 122 EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
E + M +L V H N IVHRDLKP N+L+ D+ ++L+DFG
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG 245
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 68/164 (41%), Gaps = 22/164 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEY 80
+E + +G GA+ V K R D+ A+K++ + I + +L S N + Y
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 81 F--WREDEDAV-------------LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
+ W E + V + +E+ + S+ + R E R
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD-------EYWR 120
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
QIL + H I+HRDLKP N+ I + +K+ DFG A+
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
G LTS +GT + A E+L G+ Y ++D++SL
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSL 217
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 93
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 94 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 142
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
V +R+F+ PELL Y +D+WSL
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGC 215
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEP 188
QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE A +G P +
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 189 NAP 191
AP
Sbjct: 179 TAP 181
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 27 VGSGAY-SDVYKGRRLSDNLIVALKEV--HDYQSAFREIEALQILQNSPNVVVLHEYFWR 83
+G GA + VY+G + DN VA+K + + A RE++ L+ PNV+ YF
Sbjct: 32 LGHGAEGTIVYRG--MFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVI---RYFCT 86
Query: 84 EDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIV 143
E + +++ +L + +++D G+ E + Q SG+ H IV
Sbjct: 87 EKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGL---EPITLLQQTTSGLAHLHSLNIV 140
Query: 144 HRDLKPGNLLIG---DDGVLK--LADFGQARILL-------------GNE-FDAPDGNSQ 184
HRDLKP N+LI G +K ++DFG + L G E + AP+ S+
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200
Query: 185 PCEPNAPYQDNMSEAPQVDLEV--EDASPEGDVNQEQG 220
C+ N Y ++ A V V E + P G Q Q
Sbjct: 201 DCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA 238
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 141
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
V +R+F+ PELL Y +D+WSL
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGC 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 165
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 166 AREGAKFPIKWTAP 179
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE
Sbjct: 112 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 171
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 172 AREGAKFPIKWTAP 185
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE
Sbjct: 114 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 173
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 174 AREGAKFPIKWTAP 187
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
YE++ VG G YS+V++G +++N I+ + + + REI+ LQ L PN+V L
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 79 EYFW-REDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + + L+ E++ V+ + ++ +I+ ++ ++L +D C
Sbjct: 93 DIVRDQHSKTPSLIFEYVNNTDFKVLYPT-----------LTDYDIRYYIYELLKALDYC 141
Query: 138 HRNTIVHRDLKPGNLLIGDD-GVLKLADFGQA 168
H I+HRD+KP N++I + L+L D+G A
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAA 321
V +R+F+ PELL Y +D+WSL
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGC 214
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GAY +V R+++ IV +K D ++ + + N
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 65 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 113
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 16/147 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + S+ K E + + +I R Q G+D H +
Sbjct: 89 STAPQLAIVTQWCEGSSLYHHLHASETKFEMK-----KLIDIAR---QTARGMDYLHAKS 140
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+HRDLK N+ + +D +K+ DFG A
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ NE
Sbjct: 115 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT 174
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 175 AREGAKFPIKWTAP 188
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 18/177 (10%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQS 57
+P+ + T + +YE+ E +G G S+V+ R L + VA+K + +
Sbjct: 15 VPRGSHMTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYL 74
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVL---VLEFLRTDLATVIAESKKKREDRG 114
FR N P +V +++ E L V+E++ I ++ +
Sbjct: 75 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK- 133
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
R I V + ++ H+N I+HRD+KP N++I +K+ DFG AR +
Sbjct: 134 -RAIEV------IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 183
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 69/160 (43%), Gaps = 23/160 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK------EVHDYQSAFREIEALQILQNSPNV 74
+ + + +G G + ++ G+ L N VA+K +R + L + P V
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQV 65
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
YF + +VLE L L + D DR ++ + +Q+++ +
Sbjct: 66 Y----YFGPXGKYNAMVLELLGPSLEDLF--------DLCDRTFTLKTVLMIAIQLITRM 113
Query: 135 DACHRNTIVHRDLKPGNLLIGDDGV-----LKLADFGQAR 169
+ H ++++RD+KP N L+G G + + DFG A+
Sbjct: 114 EYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAK 153
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 35/165 (21%)
Query: 23 ILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFW 82
+LECVG G Y +V++G +N+ V + D +S FRE E L N+ V++ HE
Sbjct: 41 LLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE----LYNT--VMLRHEN-- 92
Query: 83 REDEDAVLVLEFLRTDLATVIAESK----KKREDRGD-------RGISVGEIKRWMVQIL 131
+L F+ +D+ + + ++ + G + R ++ I
Sbjct: 93 --------ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIA 144
Query: 132 SGVDACH--------RNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
SG+ H + I HRDLK N+L+ +G +AD G A
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 19/161 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--------DYQSAFREIEALQILQ 69
I +E+ + +G G++ V+ N A+K + D + E L +
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
P + + F + E+ V+E+L DL I K + +
Sbjct: 77 EHPFLTHMFCTF-QTKENLFFVMEYLNGGDLMYHIQSCHK---------FDLSRATFYAA 126
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+ G+ H IV+RDLK N+L+ DG +K+ADFG +
Sbjct: 127 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 22 EILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ-NSPNVVVLHEY 80
E+ E VG GA+ V K + + ++ + E + AF +E Q+ + N PN+V L+
Sbjct: 12 EVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFI-VELRQLSRVNHPNIVKLYGA 70
Query: 81 FWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
LV+E+ L V+ ++ +S W +Q GV H
Sbjct: 71 CL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS------WCLQCSQGVAYLHS 121
Query: 140 ---NTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
++HRDLKP NLL+ G VLK+ DFG A
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 16/153 (10%)
Query: 22 EILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ-NSPNVVVLHEY 80
E+ E VG GA+ V K + + ++ + E + AF +E Q+ + N PN+V L+
Sbjct: 11 EVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFI-VELRQLSRVNHPNIVKLYGA 69
Query: 81 FWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
LV+E+ L V+ ++ +S W +Q GV H
Sbjct: 70 CL---NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS------WCLQCSQGVAYLHS 120
Query: 140 ---NTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
++HRDLKP NLL+ G VLK+ DFG A
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 35/165 (21%)
Query: 23 ILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFW 82
+LECVG G Y +V++G +N+ V + D +S FRE E L N+ V++ HE
Sbjct: 12 LLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE----LYNT--VMLRHEN-- 63
Query: 83 REDEDAVLVLEFLRTDLATVIAESK----KKREDRGD-------RGISVGEIKRWMVQIL 131
+L F+ +D+ + + ++ + G + R ++ I
Sbjct: 64 --------ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIA 115
Query: 132 SGVDACH--------RNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
SG+ H + I HRDLK N+L+ +G +AD G A
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 35/165 (21%)
Query: 23 ILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFW 82
+LECVG G Y +V++G +N+ V + D +S FRE E L N+ V++ HE
Sbjct: 12 LLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETE----LYNT--VMLRHEN-- 63
Query: 83 REDEDAVLVLEFLRTDLATVIAESK----KKREDRGD-------RGISVGEIKRWMVQIL 131
+L F+ +D+ + + ++ + G + R ++ I
Sbjct: 64 --------ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIA 115
Query: 132 SGVDACH--------RNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
SG+ H + I HRDLK N+L+ +G +AD G A
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 159
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 160
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 157
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 158
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 179
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 38/185 (20%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALK---------EVHDYQSAFREIEALQILQNSPNVVVL 77
+G G + ++ G+ L N VA+K ++H ++++ + + P V
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAG--EGLPQVY-- 63
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
YF + +VLE L L + D DR ++ + +Q+LS ++
Sbjct: 64 --YFGPXGKYNAMVLELLGPSLEDLF--------DLCDRTFTLKTVLMIAIQLLSRMEYV 113
Query: 138 HRNTIVHRDLKPGNLLIGDDG-----VLKLADFGQARILLGNEFDAPDGNSQPCEPNAPY 192
H +++RD+KP N LIG G V+ + DFG L E+ P+ + + PY
Sbjct: 114 HSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFG-----LAKEYIDPE-----TKKHIPY 163
Query: 193 QDNMS 197
+++ S
Sbjct: 164 REHKS 168
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 180
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGR---RLSDNLIVALKEVHDYQSAFR---EIEALQIL 68
P++ ++I + +G G +S VY ++ +ALK + R E++ L +
Sbjct: 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVA 76
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
NV+ + +Y +R+++ V+ + +L + I S +S E++ +M+
Sbjct: 77 GGQDNVMGV-KYCFRKNDHVVIAMPYLEHESFLDILNS-----------LSFQEVREYML 124
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDD-GVLKLADFGQAR 169
+ + H+ IVHRD+KP N L L DFG A+
Sbjct: 125 NLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 164
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSPNVVVLHE 79
Y + E +G G+YS+ + + N+ A+K + + EIE L PN++ L +
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 80 YFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
+ + + LV E +R +L I K E E + I V+ H
Sbjct: 89 -VYDDGKHVYLVTELMRGGELLDKILRQKFFSER---------EASFVLHTIGKTVEYLH 138
Query: 139 RNTIVHRDLKPGNLLI----GDDGVLKLADFGQARIL 171
+VHRDLKP N+L G+ L++ DFG A+ L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 183
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV------HDYQSAFREIEALQILQ 69
E++ YE+ E +G+G ++ V + +VA+K + D EIEAL+ L+
Sbjct: 7 ELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLR 66
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ + H +VLE+ +L I + E+ E +
Sbjct: 67 HQHICQLYH--VLETANKIFMVLEYCPGGELFDYIISQDRLSEE---------ETRVVFR 115
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPC 186
QI+S V H HRDLKP NLL + LKL DFG GN+ D + Q C
Sbjct: 116 QIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK----DYHLQTC 169
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 289 LTSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
L +C G+ + APEL+ G + G E D+WS+ L
Sbjct: 166 LQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILL 200
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 187
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 96
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 97 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 182
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LKE+ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG 193
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ +I+S ++ H I+HRDLKP N+L+ +D +++ DFG A++L
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVL 185
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 95
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 96 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 146
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 220
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 97
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 98 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 222
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 102
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 103 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 153
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 184
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 227
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDN--LIVALKEVHDYQSAFREIEALQILQNSPNVVVLH 78
Y+++ +G G YS+V++ +++N ++V + + + REI+ L+ L+ PN++ L
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITL- 96
Query: 79 EYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
A +V + + A V + + ++ +I+ +M +IL +D CH
Sbjct: 97 ---------ADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 139 RNTIVHRDLKPGNLLIGDDG-VLKLADFGQA 168
I+HRD+KP N++I + L+L D+G A
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSPNVVVLHE 79
Y + E +G G+YS+ + + N+ A+K + + EIE L PN++ L +
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKD 88
Query: 80 YFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
+ + + LV E +R +L I K E E + I V+ H
Sbjct: 89 -VYDDGKHVYLVTELMRGGELLDKILRQKFFSER---------EASFVLHTIGKTVEYLH 138
Query: 139 RNTIVHRDLKPGNLLI----GDDGVLKLADFGQARIL 171
+VHRDLKP N+L G+ L++ DFG A+ L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL 175
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 30/181 (16%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVH-----DYQSAFREIEALQILQNSPNVVVLHE 79
E +G G + +V+ GR +DN +VA+K D ++ F + + + PN+V L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 80 YFWREDEDAVLV--------LEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
++ +++ L FLRT+ A + K + GD
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLLQMVGDAA-------------- 223
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQ-PCEPNA 190
+G++ +HRDL N L+ + VLK++DFG +R + A G Q P + A
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTA 283
Query: 191 P 191
P
Sbjct: 284 P 284
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ QI+SG++ H+ I++RDLKP N+L+ DDG ++++D G A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ QI+SG++ H+ I++RDLKP N+L+ DDG ++++D G A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ QI+SG++ H+ I++RDLKP N+L+ DDG ++++D G A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 23/160 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK------EVHDYQSAFREIEALQILQNSPNV 74
+ + + +G G + ++ G+ L N VA+K +R + L P V
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
YF + +VLE L L + D DR S+ + +Q++S +
Sbjct: 71 Y----YFGPCGKYNAMVLELLGPSLEDLF--------DLCDRTFSLKTVLMIAIQLISRM 118
Query: 135 DACHRNTIVHRDLKPGNLLIGDDG-----VLKLADFGQAR 169
+ H +++RD+KP N LIG G V+ + DFG A+
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ QI+SG++ H+ I++RDLKP N+L+ DDG ++++D G A
Sbjct: 294 YTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLA 336
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 13 TRPEIIAK--YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-------HDYQSAFREIE 63
+RPE + ++ L +G G+Y +V+K R D + A+K D E+
Sbjct: 49 SRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVG 108
Query: 64 ALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
+ + + P V L E W +E +L +L+T+L S ++ + + ++
Sbjct: 109 SHEKVGQHPCCVRL-EQAW--EEGGIL---YLQTELC---GPSLQQHCEAWGASLPEAQV 159
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
++ L + H +VH D+KP N+ +G G KL DFG
Sbjct: 160 WGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFG 202
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVH-----DYQSAFREIEALQILQNSPNVVVLHE 79
E +G G + +V+ GR +DN +VA+K D ++ F + + + PN+V L
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 80 YFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
+ + +V+E ++ D T + G R + V + + + +G++
Sbjct: 180 VC-TQKQPIYIVMELVQGGDFLTFL-------RTEGAR-LRVKTLLQMVGDAAAGMEYLE 230
Query: 139 RNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+HRDL N L+ + VLK++DFG +R
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 18/162 (11%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+YE+ E +G G S+V+ R L + VA+K + + FR N P
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 73 NVVVLHEYFWREDEDAVL---VLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+V +++ E L V+E++ I ++ + R I V +
Sbjct: 73 AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK--RAIEV------IAD 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
++ H+N I+HRD+KP N++I +K+ DFG AR +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 129
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 124
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E + +G+G++ V Y + L +V LK++ + R +A+
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +VLE+ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVLEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +K+ADFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG 194
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 129
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 158
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 126
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 155
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V + + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L EY ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 19/164 (11%)
Query: 15 PEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDYQSAFREIEALQ 66
P + +++L +G G+Y+ V R + I A+K V D E +
Sbjct: 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE 64
Query: 67 ILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKR 125
N P +V LH F E V+E++ DL + +K E+ +
Sbjct: 65 QASNHPFLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHA---------RF 114
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ +I ++ H I++RDLK N+L+ +G +KL D+G +
Sbjct: 115 YSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V + + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L EY ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 17/145 (11%)
Query: 48 ALKEVHDYQSAFREIEALQILQNSPNVVVL---HEYFWREDEDAVLVLEFLRTDLATVIA 104
ALK + D A RE+E P++V + +E + + ++V E L
Sbjct: 91 ALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVXECLDG------G 144
Query: 105 ESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD---DGVLK 161
E + +DRGD+ + E I + H I HRD+KP NLL + +LK
Sbjct: 145 ELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILK 204
Query: 162 LADFGQARILLGNEFDAPDGNSQPC 186
L DFG A+ E + + + PC
Sbjct: 205 LTDFGFAK-----ETTSHNSLTTPC 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 120 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 169
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V + + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L EY ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EYSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 85
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 86 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI + G +++ DFG A+ + G
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG 180
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 64/209 (30%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH------DYQSAFREIEALQILQNS 71
+ +E ++C+G G + V++ + D+ A+K + + RE++AL L++
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH- 63
Query: 72 PNVVVLHEYF----------WREDEDAVLV----LEFLRTDLATVIAESKK-KREDRGDR 116
P +V YF W+E+ D + + ++ + + + A S K +R D
Sbjct: 64 PGIV---RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFST 120
Query: 117 GISVGEI---------------------KRWM------------------VQILSGVDAC 137
+VG++ K WM +QI V+
Sbjct: 121 KNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFL 180
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H ++HRDLKP N+ D V+K+ DFG
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDDVVKVGDFG 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 152
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 181
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 100 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 151
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 180
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ----SAFREIEALQILQNSPNVV 75
+YE+++ +GSG + R N +VA+K + + + REI + L++ PN+V
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRH-PNIV 78
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
E A+++ +L I + + ED E + + Q++SGV
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---------EARFFFQQLISGVS 129
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
CH + HRDLK N L+ LK+ DFG ++
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 165
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 92 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 141
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 84
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E++ S +R R S + +
Sbjct: 85 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMF----SHLRRIGR----FSEPHARFYAA 134
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 179
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 16/149 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 73 STAPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 124
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRDLK N+ + +D +K+ DFG A +
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATV 153
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 124
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+HRDLK N+ + +D +K+ DFG A
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 71/151 (47%), Gaps = 11/151 (7%)
Query: 40 RLSDNLIVALKEVH-DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLE-FLRT 97
R+SDNL VA+K V D S + E+ P VVL + + +L+ F R
Sbjct: 72 RVSDNLPVAIKHVEKDRISDWGELPN---GTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 128
Query: 98 DLATVIAESKKKREDRGD----RGISVGEIKR-WMVQILSGVDACHRNTIVHRDLKPGNL 152
D +I E + +D D RG E+ R + Q+L V CH ++HRD+K N+
Sbjct: 129 DSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 153 LIG-DDGVLKLADFGQARILLGNEFDAPDGN 182
LI + G LKL DFG +L + DG
Sbjct: 189 LIDLNRGELKLIDFGSGALLKDTVYTDFDGT 219
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 18/162 (11%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH-------DYQSAFREIEALQILQNSP 72
+YE+ E +G G S+V+ R L + VA+K + + FR N P
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 73 NVVVLHEYFWREDEDAVL---VLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
+V ++ E L V+E++ I ++ + R I V +
Sbjct: 73 AIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK--RAIEV------IAD 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
++ H+N I+HRD+KP N++I +K+ DFG AR +
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 22/152 (14%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIE-ALQILQNSPNVVVLHEYFWRED 85
+GSG++ VYKG+ D + LK V F+ + +L+ + +V +L
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-------- 95
Query: 86 EDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL-------SGVDACH 138
L + ++ D ++ + + + + V E K M Q++ G+D H
Sbjct: 96 ----LFMGYMTKDNLAIVTQWCEGSSLY--KHLHVQETKFQMFQLIDIARQTAQGMDYLH 149
Query: 139 RNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
I+HRD+K N+ + + +K+ DFG A +
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ----SAFREIEALQILQNSPNVV 75
+YE+++ +GSG + R N +VA+K + + + REI + L++ PN+V
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRH-PNIV 77
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
E A+++ +L I + + ED E + + Q++SGV
Sbjct: 78 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---------EARFFFQQLISGVS 128
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
CH + HRDLK N L+ LK+ DFG ++
Sbjct: 129 YCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSK 164
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDYQSAFREIEALQILQNSP 72
+++L +G G+Y+ V R + I A+K V D E + N P
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V LH F E V+E++ DL + +K E+ + + +I
Sbjct: 67 FLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHA---------RFYSAEIS 116
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ H I++RDLK N+L+ +G +KL D+G +
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDYQSAFREIEALQILQNSP 72
+++L +G G+Y+ V R + I A+K V D E + N P
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V LH F E V+E++ DL + +K E+ + + +I
Sbjct: 82 FLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHA---------RFYSAEIS 131
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ H I++RDLK N+L+ +G +KL D+G +
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 26/166 (15%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEY 80
+E + +G GA+ V K R D+ A+K++ + I + L S N + Y
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 81 F--WREDEDAV-------------LVLEFL--RTDLATVIAESKKKREDRGDRGISVGEI 123
+ W E + V + E+ RT + +E+ ++ D E
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD---------EY 118
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R QIL + H I+HR+LKP N+ I + +K+ DFG A+
Sbjct: 119 WRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
Score = 28.9 bits (63), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 284 GRQGALTSCVGTRWFRAPELLYGSTSYGLEVDLWSL 319
G LTS +GT + A E+L G+ Y ++D +SL
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSL 217
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
+++ ++ QI G+ +HRDL+ N+L+ D K+ADFG AR++ E
Sbjct: 106 LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT 165
Query: 178 APDGNSQPCEPNAP 191
A +G P + AP
Sbjct: 166 AREGAKFPIKWTAP 179
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LKE+ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG 193
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 120 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 101 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 152
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+HRDLK N+ + +D +K+ DFG A
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQ----ILQNSPNVVVLHEYFW 82
+GSG++ VYKG+ D VA+K ++ ++++A + +L+ + +V +L +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 83 REDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
+V ++ + L + + K E I + +I R Q G+D H +
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIAR---QTAQGMDYLHAKS 144
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+HRDLK N+ + +D +K+ DFG A
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 127
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG+A++L E
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 18/165 (10%)
Query: 17 IIAKYEILECVGSGAYSDVYKG-RRLSDNL----IVALKEVHDYQSAFREIEALQILQNS 71
+ +++++ +G GA +V R+++ IV +K D ++ + + N
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH 63
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDR--GDRGISVGEIKRWMVQ 129
NVV + + RE L LE+ S + DR D G+ + +R+ Q
Sbjct: 64 ENVVKFYGHR-REGNIQYLFLEYC----------SGGELFDRIEPDIGMPEPDAQRFFHQ 112
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+++GV H I HRD+KP NLL+ + LK++DFG A + N
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 127
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG+A++L E
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 144
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR +L EFD+
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDS 191
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 56/214 (26%)
Query: 19 AKYEILECVGSGAYSDVYK-------GRRLSDNLIVALKEVHDYQSAFR-EIEALQILQN 70
A+YEI++ +G GA+ V + GR ++ ++ K V Y A R EI+ L+ L
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNT 70
Query: 71 S-PN----VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
+ PN V + E+F +V E L I E+ G + I++
Sbjct: 71 TDPNSTFRCVQMLEWF-EHHGHICIVFELLGLSTYDFIKEN-------GFLPFRLDHIRK 122
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLI--------------GDDGVL-----KLADFG 166
QI V+ H N + H DLKP N+L D+ L K+ DFG
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 167 QA--------RILLGNEFDAPD-----GNSQPCE 187
A ++ + AP+ G SQPC+
Sbjct: 183 SATYDDEHHSTLVXXRHYRAPEVILALGWSQPCD 216
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 23 ILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA-----FREIEALQILQNSPNVVVL 77
I E +G+G++ V++ ++ V + D+ + RE+ ++ L++ PN+V+
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH-PNIVLF 99
Query: 78 HEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ + +V E+L R L ++ +S + + R +S+ + G++
Sbjct: 100 MGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA------YDVAKGMNY 152
Query: 137 CH-RNT-IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
H RN IVHRDLK NLL+ +K+ DFG +R+
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 129
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG+A++L E
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 175
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 17/168 (10%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVH---DYQSAFREIEALQILQNS---PNVVVLHEY 80
+G GAY V K R + I A+K + + Q R + L I + P V +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGA 101
Query: 81 FWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE--IKRWMVQILSGVDACH 138
+RE D + E T L K + D+G ++ E + + V I+ ++ H
Sbjct: 102 LFREG-DVWICXELXDTSL-------DKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH 153
Query: 139 -RNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQP 185
+ +++HRD+KP N+LI G +K DFG + L+ + D +P
Sbjct: 154 SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKP 201
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E+ + G+ P +
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWS 173
Query: 190 AP 191
P
Sbjct: 174 PP 175
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 19/158 (12%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV--------HDYQSAFREIEALQILQNSP 72
+++L +G G+Y+ V R + I A++ V D E + N P
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
+V LH F E V+E++ DL + +K E+ + + +I
Sbjct: 114 FLVGLHSCFQTESR-LFFVIEYVNGGDLMFHMQRQRKLPEEHA---------RFYSAEIS 163
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ H I++RDLK N+L+ +G +KL D+G +
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--------DYQSAFREIEALQILQ 69
+ + L +G G++ V R + A+K + D + E L +L
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
P + LH F D V+E++ DL I + K +E + +
Sbjct: 78 KPPFLTQLHSCFQTVDR-LYFVMEYVNGGDLMYHIQQVGKFKEPQA---------VFYAA 127
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I G+ H+ I++RDLK N+++ +G +K+ADFG +
Sbjct: 128 EISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK 168
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 37 KGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAV-LVLEFL 95
KGR DN +++ H + + EI L+ L + PN++ L + F ED+ LV EF
Sbjct: 76 KGRYSDDN--KNIEKFH--EEIYNEISLLKSL-DHPNIIKLFDVF--EDKKYFYLVTEFY 128
Query: 96 RTD--LATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLL 153
+I K D + M QILSG+ H++ IVHRD+KP N+L
Sbjct: 129 EGGELFEQIINRHKFDECDAAN----------IMKQILSGICYLHKHNIVHRDIKPENIL 178
Query: 154 IGDDGVL---KLADFG 166
+ + L K+ DFG
Sbjct: 179 LENKNSLLNIKIVDFG 194
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E+ + G+ P +
Sbjct: 113 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 172
Query: 190 AP 191
P
Sbjct: 173 PP 174
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 87/214 (40%), Gaps = 56/214 (26%)
Query: 19 AKYEILECVGSGAYSDVYK-------GRRLSDNLIVALKEVHDYQSAFR-EIEALQILQN 70
A+YEI++ +G GA+ V + GR ++ ++ K V Y A R EI+ L+ L
Sbjct: 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV---KNVDRYCEAARSEIQVLEHLNT 70
Query: 71 S-PN----VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKR 125
+ PN V + E+F +V E L I E+ G + I++
Sbjct: 71 TDPNSTFRCVQMLEWF-EHHGHICIVFELLGLSTYDFIKEN-------GFLPFRLDHIRK 122
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLI--------------GDDGVL-----KLADFG 166
QI V+ H N + H DLKP N+L D+ L K+ DFG
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFG 182
Query: 167 QA--------RILLGNEFDAPD-----GNSQPCE 187
A ++ + AP+ G SQPC+
Sbjct: 183 SATYDDEHHSTLVSTRHYRAPEVILALGWSQPCD 216
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 24 LECVGSGAYSDVYKGRRLSDNLIVALKEV----HDYQSAFREIEALQILQNSPNVVVLHE 79
LE +G G++ +V+KG +VA+K + + + + E + Q + V +
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 80 YFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
+ + +++E+L A + + E +I + +IL G+D H
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDE---------FQIATMLKEILKGLDYLHS 138
Query: 140 NTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+HRD+K N+L+ + G +KLADFG A
Sbjct: 139 EKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E+ + G+ P +
Sbjct: 114 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 173
Query: 190 AP 191
P
Sbjct: 174 PP 175
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E+ + G+ P +
Sbjct: 109 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168
Query: 190 AP 191
P
Sbjct: 169 PP 170
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E+ + G+ P +
Sbjct: 120 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 179
Query: 190 AP 191
P
Sbjct: 180 PP 181
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 64
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 122
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG+A++L E
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 173
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 24 LECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHE 79
++ +GSGA+ VYKG + D + VA+K + + S E L + V
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILD--EAYVMAGVGSP 79
Query: 80 YFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
Y R + L T L RE+RG G ++ W +QI G+
Sbjct: 80 YVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQ--DLLNWCMQIAKGMSYLED 137
Query: 140 NTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+VHRDL N+L+ +K+ DFG AR+L
Sbjct: 138 VRLVHRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 62
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 120
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG+A++L E
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 171
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG 193
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQN---------SPNVVVL 77
+G GAY V K I+A+K + +S E E Q+L + P +V
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRI---RSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ +RE D + +E + T +D I +G+I V+ L+ +
Sbjct: 87 YGALFREG-DCWICMELMSTSFDKFYKYVYSVLDDVIPEEI-LGKITLATVKALNHLK-- 142
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQP 185
I+HRD+KP N+L+ G +KL DFG + L+ + D +P
Sbjct: 143 ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRP 190
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 87/208 (41%), Gaps = 34/208 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV----HDYQSAFREIEALQILQNS--- 71
+Y ++ +G G +S V+ + VA+K V H ++A EI+ L+ ++ S
Sbjct: 31 GRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPS 90
Query: 72 -PN---VVVLHEYFWREDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
PN VV L + F + + +V E L L I +S + G+ V +K
Sbjct: 91 DPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQ-------GLPVRCVK 143
Query: 125 RWMVQILSGVDACH-RNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNS 183
+ Q+L G+D H + I+H D+KP N+L+ D R + + +
Sbjct: 144 SIIRQVLQGLDYLHSKCKIIHTDIKPENILM-------CVDDAYVRRMAAEATEWQKAGA 196
Query: 184 QPCEPNAPYQDNMSEAPQVDLEVEDASP 211
P P +S AP DL V P
Sbjct: 197 PP-----PSGSAVSTAPAADLLVNPLDP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 69
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 127
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG+A++L E
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEE 178
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 19/161 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--------DYQSAFREIEALQILQ 69
I + + + +G G++ V+ N A+K + D + E L +
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
P + + F + E+ V+E+L DL I K + +
Sbjct: 76 EHPFLTHMFCTF-QTKENLFFVMEYLNGGDLMYHIQSCHK---------FDLSRATFYAA 125
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+ G+ H IV+RDLK N+L+ DG +K+ADFG +
Sbjct: 126 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 34/193 (17%)
Query: 14 RPEIIAKYEILECVGSGAYSDV-----YKGRRLSDNLIVALKEVHDYQSAFR-----EIE 63
R +I+ K E+ G GA+ V Y D ++VA+K + D A R E E
Sbjct: 14 RRDIVLKREL----GEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAE 69
Query: 64 ALQILQNSPNV------------VVLHEYFWREDEDAVLVLEFLRTDLA-TVIAESKKKR 110
L LQ+ V +++ EY D + +FLR +I + R
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN-----KFLRAHGPDAMILVDGQPR 124
Query: 111 EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
+ +G+ G+S ++ QI SG+ VHRDL N L+G + ++K+ DFG +R
Sbjct: 125 QAKGELGLS--QMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRD 182
Query: 171 LLGNEFDAPDGNS 183
+ ++ G++
Sbjct: 183 VYSTDYYRVGGHT 195
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 12 HTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV------HDYQSAFREIEAL 65
H+R + + L+ +G G++ +VYKG +VA+K + + + +EI L
Sbjct: 12 HSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVL 71
Query: 66 QILQNSPNVVVLHEYF--WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEI 123
+SP + YF + + +++E+L A + + E + I
Sbjct: 72 SQC-DSPYIT---RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEET------YIATI 121
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
R +IL G+D H +HRD+K N+L+ + G +KLADFG A
Sbjct: 122 LR---EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 4 PLPKSWSIHTRPEIIAKYEILECVGSGAYSDV----YKGRRLSDNLIVALKEVHDYQSAF 59
PL W+++ + + ++L+ +G G + DV Y+G +++ + +K Q+
Sbjct: 2 PLGSGWALNMK-----ELKLLQTIGKGEFGDVMLGDYRGNKVA---VKCIKNDATAQAFL 53
Query: 60 REIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGIS 119
E + L++S N+V L E +V E++ S+ + GD
Sbjct: 54 AEASVMTQLRHS-NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC--- 109
Query: 120 VGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ ++ + + ++ N VHRDL N+L+ +D V K++DFG +
Sbjct: 110 ---LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK------EVHDYQSAFREIEALQILQNSPNV 74
+ + + +G G + ++ G+ L N VA+K +R + L P V
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
YF + +VLE L L + D DR S+ + +Q++S +
Sbjct: 71 Y----YFGPCGKYNAMVLELLGPSLEDLF--------DLCDRTFSLKTVLMIAIQLISRM 118
Query: 135 DACHRNTIVHRDLKPGNLLIGDDG-----VLKLADFGQAR 169
+ H +++RD+KP N LIG G V+ + DF A+
Sbjct: 119 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E++ ++ + + + E + +
Sbjct: 92 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA---------RFYA 140
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 186
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R + + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG 193
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 79 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 129
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 130 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 175
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN--EFDAPDGNS 183
W VQI G+ +VHRDL N+L+ +K+ DFG AR+L G+ E++A DG
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA-DGGK 180
Query: 184 QPCE 187
P +
Sbjct: 181 MPIK 184
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E++ ++ + + + E + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA---------RFYA 147
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 77 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 127
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 128 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 78 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 128
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 129 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E++ ++ + + + E + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA---------RFYA 147
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 81/166 (48%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E++ ++ + + + E + +
Sbjct: 100 -NFPFLVKL-EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHA---------RFYA 148
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 194
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E+ + G+ P +
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 188
Query: 190 AP 191
P
Sbjct: 189 PP 190
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 126 WMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN--EFDAPDGNS 183
W VQI G+ +VHRDL N+L+ +K+ DFG AR+L G+ E++A DG
Sbjct: 145 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNA-DGGK 203
Query: 184 QPCE 187
P +
Sbjct: 204 MPIK 207
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 126
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P + L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 100 -NFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P + L E+ ++++ + +V+E+ S +R R S + +
Sbjct: 100 -NFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMF----SHLRRIGR----FSEPHARFYAA 149
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 23/161 (14%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNL-----IVALKEVHDYQSAFREIEALQILQNSP 72
++K EIL G G + V+K + L I+ + + D + EI + L ++
Sbjct: 91 VSKTEIL---GGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHA- 146
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTD--LATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N++ L++ F ++ D VLV+E++ +I ES ++ + +M QI
Sbjct: 147 NLIQLYDAFESKN-DIVLVMEYVDGGELFDRIIDES---------YNLTELDTILFMKQI 196
Query: 131 LSGVDACHRNTIVHRDLKPGNLLI--GDDGVLKLADFGQAR 169
G+ H+ I+H DLKP N+L D +K+ DFG AR
Sbjct: 197 CEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 67/160 (41%), Gaps = 23/160 (14%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALK------EVHDYQSAFREIEALQILQNSPNV 74
+ + + +G G + ++ G+ L N VA+K +R + L P V
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 91
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGV 134
YF + +VLE L L + D DR S+ + +Q++S +
Sbjct: 92 Y----YFGPCGKYNAMVLELLGPSLEDLF--------DLCDRTFSLKTVLMIAIQLISRM 139
Query: 135 DACHRNTIVHRDLKPGNLLIGDDG-----VLKLADFGQAR 169
+ H +++RD+KP N LIG G V+ + DF A+
Sbjct: 140 EYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 179
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 15/156 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALK-EVHDYQSAFREIEA--LQILQNSPNVVV 76
KY + +GSG++ D+Y G ++ VA+K E + IE+ +++Q +
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPS 69
Query: 77 LHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ ++ E + V+V+E L L + +K S+ + Q++S ++
Sbjct: 70 I-KWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--------FSLKTVLLLADQMISRIEY 120
Query: 137 CHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQAR 169
H +HRD+KP N L+G ++ + DFG A+
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 75 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 125
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 24/168 (14%)
Query: 12 HTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ-- 69
H +P + + L+ +G G++ V R ++ + A+K V ++ ++ E I+
Sbjct: 34 HAKP---SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVK-VLQKKAILKKKEEKHIMSER 89
Query: 70 -------NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVG 121
P +V LH F D+ VL+++ +L + + E R
Sbjct: 90 NVLLKNVKHPFLVGLHFSFQTADK-LYFVLDYINGGELFYHLQRERCFLEPRA------- 141
Query: 122 EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + +I S + H IV+RDLKP N+L+ G + L DFG +
Sbjct: 142 --RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 76 DNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYV-------REHKDNIGSQY--LLNWCVQ 126
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 172
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P +V L E+ ++++ + +V+E+ ++ + + + E + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA---------RFYA 147
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 193
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 16/156 (10%)
Query: 23 ILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSA-----FREIEALQILQNSPNVVVL 77
I E +G+G++ V++ ++ V + D+ + RE+ ++ L++ PN+V+
Sbjct: 41 IKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH-PNIVLF 99
Query: 78 HEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ + +V E+L R L ++ +S + + R +S+ + G++
Sbjct: 100 MGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMA------YDVAKGMNY 152
Query: 137 CH-RNT-IVHRDLKPGNLLIGDDGVLKLADFGQARI 170
H RN IVHR+LK NLL+ +K+ DFG +R+
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 87
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 88 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 145
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 146 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 196
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ----------N 70
+ + +G G + +VY R+ + A+K + + ++ E L + + +
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQ 129
P +V + F D+ + ++ DL +++ G+ S +++ + +
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ----------HGVFSEADMRFYAAE 299
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+ G++ H +V+RDLKP N+L+ + G ++++D G A
Sbjct: 300 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDE 86
+GSG V+K R ++A+K++ +S +E E +IL + V+ H+ +
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKE-ENKRILMDLDVVLKSHDCPYIVQC 89
Query: 87 DAVLVLE---FLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIV 143
+ F+ +L AE KKR +G++ +V+ L + H ++
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH--GVI 147
Query: 144 HRDLKPGNLLIGDDGVLKLADFG 166
HRD+KP N+L+ + G +KL DFG
Sbjct: 148 HRDVKPSNILLDERGQIKLCDFG 170
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R + +
Sbjct: 120 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 214
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV----HDYQSAFREIEALQILQNS--- 71
+Y ++ +G G +S V+ + VA+K V H ++A EI L+ ++NS
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPN 96
Query: 72 -PN---VVVLHEYFWREDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
PN VV L + F + +V E L L I +S +G+ + +K
Sbjct: 97 DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNY-------QGLPLPCVK 149
Query: 125 RWMVQILSGVDACH-RNTIVHRDLKPGNLLI 154
+ + Q+L G+D H + I+H D+KP N+L+
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILL 180
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R + +
Sbjct: 99 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ----------N 70
+ + +G G + +VY R+ + A+K + + ++ E L + + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQ 129
P +V + F D+ + ++ DL +++ G+ S +++ + +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ----------HGVFSEADMRFYAAE 300
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+ G++ H +V+RDLKP N+L+ + G ++++D G A
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 202
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR + EFD+
Sbjct: 203 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 64
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 65 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 122
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 173
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 65
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 123
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDY-----QSAFREIEALQILQNSPNVVVLHE 79
E +G G + K ++ +KE+ + ++ +E++ ++ L++ PNV+
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEH-PNVLKFIG 74
Query: 80 YFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHR 139
++ D+ + E+++ I +S + R +S + I SG+ H
Sbjct: 75 VLYK-DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQR-VSFAK------DIASGMAYLHS 126
Query: 140 NTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDG 181
I+HRDL N L+ ++ + +ADFG AR+++ +E P+G
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMV-DEKTQPEG 167
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 24/165 (14%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
+++ ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 93
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV 128
N P +V L E+ ++++ + +V+E+ +A + R + +
Sbjct: 94 -NFPFLVKL-EFSFKDNSNLYMVMEY--------VAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NLLI G +++ DFG A+ + G
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 188
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSDNLIVALKEV----HDYQSAFREIEALQILQNS--- 71
+Y ++ +G G +S V+ + VA+K V H ++A EI L+ ++NS
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPN 80
Query: 72 -PN---VVVLHEYFWREDEDAV---LVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
PN VV L + F + +V E L L I +S +G+ + +K
Sbjct: 81 DPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNY-------QGLPLPCVK 133
Query: 125 RWMVQILSGVDACH-RNTIVHRDLKPGNLLI 154
+ + Q+L G+D H + I+H D+KP N+L+
Sbjct: 134 KIIQQVLQGLDYLHTKCRIIHTDIKPENILL 164
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 72
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 73 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 130
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 131 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 181
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 68
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 69 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 126
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 127 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 177
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 65
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 123
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 65
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 66 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 123
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 174
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 25 ECVGSGAYSDVYKGRRLSD---NLIVALKEVHDYQSAFREIE------ALQILQNSPNVV 75
+ +G G + V +G + +L VA+K + S+ REIE A + PNV+
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 76 ----VLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
V E + +++L F++ DL T + S R + G + I + + ++MV I
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYS---RLETGPKHIPLQTLLKFMVDI 156
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G++ +HRDL N ++ DD + +ADFG ++ + ++
Sbjct: 157 ALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 62
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 120
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 18/192 (9%)
Query: 16 EIIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH----DYQSAFREIEALQILQNS 71
E+ KY I E +G G + V++ S K V D +EI L I ++
Sbjct: 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHR 61
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLR-TDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
N++ LHE F E+ V++ EF+ D+ I S + +R EI ++ Q+
Sbjct: 62 -NILHLHESF-ESMEELVMIFEFISGLDIFERINTSAFELNER--------EIVSYVHQV 111
Query: 131 LSGVDACHRNTIVHRDLKPGNLLIGD--DGVLKLADFGQARILL-GNEFDAPDGNSQPCE 187
+ H + I H D++P N++ +K+ +FGQAR L G+ F +
Sbjct: 112 CEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYA 171
Query: 188 PNAPYQDNMSEA 199
P D +S A
Sbjct: 172 PEVHQHDVVSTA 183
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 69
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 127
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ----------N 70
+ + +G G + +VY R+ + A+K + + ++ E L + + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQ 129
P +V + F D+ + ++ DL +++ G+ S +++ + +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ----------HGVFSEADMRFYAAE 300
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+ G++ H +V+RDLKP N+L+ + G ++++D G A
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%), Gaps = 21/159 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ----------N 70
+ + +G G + +VY R+ + A+K + + ++ E L + + +
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 71 SPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGI-SVGEIKRWMVQ 129
P +V + F D+ + ++ DL +++ G+ S +++ + +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ----------HGVFSEADMRFYAAE 300
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
I+ G++ H +V+RDLKP N+L+ + G ++++D G A
Sbjct: 301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 33/192 (17%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLS-----DNLIVALKEV--------HDYQSAFR 60
R +I+ K+E+ G GA+ V+ + D ++VA+K + D+Q R
Sbjct: 40 RRDIVLKWEL----GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ---R 92
Query: 61 EIEALQILQNSPNVVVLHEYF--WREDEDAVLVLEFLR-TDLATVI------AESKKKRE 111
E E L +LQ+ V +F E ++V E++R DL + A+ E
Sbjct: 93 EAELLTMLQHQHIV----RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGE 148
Query: 112 DRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
D + +G++ Q+ +G+ VHRDL N L+G V+K+ DFG +R +
Sbjct: 149 DVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI 208
Query: 172 LGNEFDAPDGNS 183
++ G +
Sbjct: 209 YSTDYYRVGGRT 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 62
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQY--LL 120
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 143
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR + EFD+
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 118 ISVGEIKRWMVQILSGVDACHR-NTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
I + IK + +L+ H I HRD+KP N+L+ +G +KL+DFG++ ++ +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI 207
Query: 177 DAPDGNSQPCEPNAPYQDNMSEAPQVDL 204
G + P ++ +VD+
Sbjct: 208 KGSRGTYEFMPPEFFSNESSYNGAKVDI 235
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 114 GDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
G G + +I G++ HR IV+RDLKP N+L+ D G ++++D G A
Sbjct: 279 GQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 148
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR + EFD+
Sbjct: 149 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 195
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 66 QILQNSPNVVVLHEYFWREDEDAV-LVLEFLRT-DLATVIAESKKKREDRGDRGISVGEI 123
QIL+ + V+ + E +DA+ LVL + DL I G G
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHM-------GQAGFPEARA 288
Query: 124 KRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ +I G++ HR IV+RDLKP N+L+ D G ++++D G A
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA 333
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 144
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR + EFD+
Sbjct: 145 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 191
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ----SAFREIEALQILQNSPNVV 75
+YE+++ +GSG + R N +VA+K + + + REI + L++ PN+V
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRH-PNIV 78
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
E A+++ +L I + + ED E + + Q++SGV
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---------EARFFFQQLISGVS 129
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
CH + HRDLK N L+ LK+ FG ++
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 143
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR + EFD+
Sbjct: 144 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 190
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLS-----DNLIVALKEVHD-----YQSAFREIE 63
R +I+ K+E+ G GA+ V+ + D ++VA+K + + Q RE E
Sbjct: 11 RRDIVLKWEL----GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE 66
Query: 64 ALQILQNSPNVVVLHEYF--WREDEDAVLVLEFLRT-DLATVI------AESKKKREDRG 114
L +LQ+ V +F E ++V E++R DL + A+ ED
Sbjct: 67 LLTMLQHQHIV----RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 122
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ +G++ Q+ +G+ VHRDL N L+G V+K+ DFG +R +
Sbjct: 123 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 182
Query: 175 EFDAPDGNS 183
++ G +
Sbjct: 183 DYYRVGGRT 191
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 16/156 (10%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ----SAFREIEALQILQNSPNVV 75
+YE+++ +GSG + R N +VA+K + + + REI + L++ PN+V
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRH-PNIV 78
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
E A+++ +L I + + ED E + + Q++SGV
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---------EARFFFQQLISGVS 129
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
CH + HRDLK N L+ LK+ FG ++
Sbjct: 130 YCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSK 165
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNL---IVALKEVHDY----QSAFREIEALQILQNSP 72
+Y+ ++ +GSG + R + D L +VA+K + ++ REI + L++ P
Sbjct: 21 RYDFVKDIGSGNFG---VARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH-P 76
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
N+V E A+++ +L I + + ED E + + Q+LS
Sbjct: 77 NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED---------EARFFFQQLLS 127
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
GV CH I HRDLK N L+ LK+ DFG ++
Sbjct: 128 GVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSK 166
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSPNVVVLHE 79
YE+ E +G G+YS + + N+ A+K + + EIE L PN++ L +
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 80 YFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACH 138
+ + + +V E ++ +L I K E E + I V+ H
Sbjct: 84 -VYDDGKYVYVVTELMKGGELLDKILRQKFFSER---------EASAVLFTITKTVEYLH 133
Query: 139 RNTIVHRDLKPGNLLI----GDDGVLKLADFGQARIL 171
+VHRDLKP N+L G+ +++ DFG A+ L
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 25/167 (14%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 141
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDA 178
G+ VHRDL N ++ + +K+ADFG AR + EFD+
Sbjct: 142 KGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 188
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 27/189 (14%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLS-----DNLIVALKEVHD-----YQSAFREIE 63
R +I+ K+E+ G GA+ V+ + D ++VA+K + + Q RE E
Sbjct: 17 RRDIVLKWEL----GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAE 72
Query: 64 ALQILQNSPNVVVLHEYF--WREDEDAVLVLEFLRT-DLATVI------AESKKKREDRG 114
L +LQ+ V +F E ++V E++R DL + A+ ED
Sbjct: 73 LLTMLQHQHIV----RFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVA 128
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
+ +G++ Q+ +G+ VHRDL N L+G V+K+ DFG +R +
Sbjct: 129 PGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST 188
Query: 175 EFDAPDGNS 183
++ G +
Sbjct: 189 DYYRVGGRT 197
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 56
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 57 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 114
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 115 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 165
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 31/167 (18%)
Query: 18 IAKYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQ 66
+ ++E L+ +G G + V Y + L +IVA EV + R
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR------ 61
Query: 67 ILQNS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEI 123
+LQNS P + L +Y ++ + V+E+ +L ++ + EDR
Sbjct: 62 VLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA--------- 111
Query: 124 KRWMVQILSGVDACH-RNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + +I+S +D H +V+RDLK NL++ DG +K+ DFG +
Sbjct: 112 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 59
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 60 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 117
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 118 NWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 168
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 31/167 (18%)
Query: 18 IAKYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQ 66
+ ++E L+ +G G + V Y + L +IVA EV + R
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR------ 62
Query: 67 ILQNS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEI 123
+LQNS P + L +Y ++ + V+E+ +L ++ + EDR
Sbjct: 63 VLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA--------- 112
Query: 124 KRWMVQILSGVDACH-RNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + +I+S +D H +V+RDLK NL++ DG +K+ DFG +
Sbjct: 113 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 31/167 (18%)
Query: 18 IAKYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQ 66
+ ++E L+ +G G + V Y + L +IVA EV + R
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR------ 60
Query: 67 ILQNS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEI 123
+LQNS P + L +Y ++ + V+E+ +L ++ + EDR
Sbjct: 61 VLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA--------- 110
Query: 124 KRWMVQILSGVDACH-RNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ + +I+S +D H +V+RDLK NL++ DG +K+ DFG +
Sbjct: 111 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 72/171 (42%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+KE+ + S N
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 62
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 120
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G G+ V S +VA+K++ + F E+ ++ Q+ NVV ++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSY 217
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
DE V V+EFL T I + E+ +I + +L + H
Sbjct: 218 LVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIAAVCLAVLQALSVLHAQG 267
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFG 166
++HRD+K ++L+ DG +KL+DFG
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFG 292
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
VGT ++ APEL+ YG EVD+WSL
Sbjct: 308 VGTPYWMAPELI-SRLPYGPEVDIWSL 333
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNV 74
Y+ + +G+GA+S+V +VA+K + S EI L +++ PN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKH-PNI 78
Query: 75 VVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V L + + L+++ + +L I E E R I Q+L
Sbjct: 79 VALDD-IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---------FQVLDA 128
Query: 134 VDACHRNTIVHRDLKPGNLL---IGDDGVLKLADFGQARI 170
V H IVHRDLKP NLL + +D + ++DFG +++
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G G+ V S +VA+K++ + F E+ ++ Q+ NVV ++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSY 140
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
DE V V+EFL T I + E+ +I + +L + H
Sbjct: 141 LVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIAAVCLAVLQALSVLHAQG 190
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFG 166
++HRD+K ++L+ DG +KL+DFG
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFG 215
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 292 CVGTRWFRAPELLYGSTSYGLEVDLWSLA 320
VGT ++ APEL+ YG EVD+WSL
Sbjct: 230 LVGTPYWMAPELI-SRLPYGPEVDIWSLG 257
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 31/164 (18%)
Query: 18 IAKYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQ 66
+ ++E L+ +G G + V Y + L +IVA EV + R
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR------ 203
Query: 67 ILQNS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEI 123
+LQNS P + L +Y ++ + V+E+ +L ++ + EDR
Sbjct: 204 VLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA--------- 253
Query: 124 KRWMVQILSGVDACH-RNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ + +I+S +D H +V+RDLK NL++ DG +K+ DFG
Sbjct: 254 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 297
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 31/164 (18%)
Query: 18 IAKYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQ 66
+ ++E L+ +G G + V Y + L +IVA EV + R
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR------ 200
Query: 67 ILQNS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEI 123
+LQNS P + L +Y ++ + V+E+ +L ++ + EDR
Sbjct: 201 VLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA--------- 250
Query: 124 KRWMVQILSGVDACH-RNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ + +I+S +D H +V+RDLK NL++ DG +K+ DFG
Sbjct: 251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFG 294
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 79/166 (47%), Gaps = 26/166 (15%)
Query: 20 KYEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQIL 68
++E ++ +G+G++ V Y + L +V LK++ + R ++A+
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 69 QNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWM 127
N P + L E+ ++++ + +V+E+ ++ + + + E + +
Sbjct: 100 -NFPFLTKL-EFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHA---------RFYA 148
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLG 173
QI+ + H +++RDLKP NL+I G +K+ DFG A+ + G
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG 194
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 27 VGSGAYSDVYKGRR--LSDNL--IVALKEVH----DYQSAF-REIEALQILQNSPNVVVL 77
+G G + V R L DN +VA+K++ D Q F REI+ L+ L + V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + LV+E+L + + + R D + + QI G++
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD-------ASRLLLYSSQICKGMEYL 131
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
VHRDL N+L+ + +K+ADFG A++L
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 165
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 122 EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQA 168
+I+ +M ++L +D CH I+HRD+KP N++I L+L D+G A
Sbjct: 133 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 180
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 193 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 223
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G G+ V S +VA+K++ + F E+ ++ Q+ NVV ++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSY 97
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
DE V V+EFL T I + E+ +I + +L + H
Sbjct: 98 LVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIAAVCLAVLQALSVLHAQG 147
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFG 166
++HRD+K ++L+ DG +KL+DFG
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFG 172
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
VGT ++ APEL+ YG EVD+WSL
Sbjct: 188 VGTPYWMAPELI-SRLPYGPEVDIWSL 213
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 122 EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLI-GDDGVLKLADFGQA 168
+I+ +M ++L +D CH I+HRD+KP N++I L+L D+G A
Sbjct: 138 DIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLA 185
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
V +R+F+ PELL Y +D+WSL L
Sbjct: 198 VASRYFKGPELLVDYQMYDYSLDMWSLGCML 228
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G G+ V S +VA+K++ + F E+ ++ Q+ NVV ++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSY 86
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
DE V V+EFL T I + E+ +I + +L + H
Sbjct: 87 LVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIAAVCLAVLQALSVLHAQG 136
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFG 166
++HRD+K ++L+ DG +KL+DFG
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFG 161
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
VGT ++ APEL+ YG EVD+WSL
Sbjct: 177 VGTPYWMAPELI-SRLPYGPEVDIWSL 202
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G G+ V S +VA+K++ + F E+ ++ Q+ NVV ++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSY 90
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
DE V V+EFL T I + E+ +I + +L + H
Sbjct: 91 LVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIAAVCLAVLQALSVLHAQG 140
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFG 166
++HRD+K ++L+ DG +KL+DFG
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFG 165
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
VGT ++ APEL+ YG EVD+WSL
Sbjct: 181 VGTPYWMAPELI-SRLPYGPEVDIWSL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S L VA+K + S + RE EAL + Q +
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 99 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 149
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 150 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 209
Query: 192 YQDNM 196
N
Sbjct: 210 ESINF 214
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNV 74
Y+ + +G+GA+S+V +VA+K + S EI L +++ PN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH-PNI 78
Query: 75 VVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V L + + L+++ + +L I E E R I Q+L
Sbjct: 79 VALDD-IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---------FQVLDA 128
Query: 134 VDACHRNTIVHRDLKPGNLL---IGDDGVLKLADFGQARI 170
V H IVHRDLKP NLL + +D + ++DFG +++
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 27 VGSGAYSDVYKGRR--LSDNL--IVALKEVH----DYQSAF-REIEALQILQNSPNVVVL 77
+G G + V R L DN +VA+K++ D Q F REI+ L+ L + V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + LV+E+L + + + R D + + QI G++
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD-------ASRLLLYSSQICKGMEYL 130
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
VHRDL N+L+ + +K+ADFG A++L
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S L VA+K + S + RE EAL + Q +
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 76 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 126
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 127 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 186
Query: 192 YQDNM 196
N
Sbjct: 187 ESINF 191
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S L VA+K + S + RE EAL + Q +
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 74 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 124
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 125 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 184
Query: 192 YQDNM 196
N
Sbjct: 185 ESINF 189
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 27 VGSGAYSDVYKGRR--LSDNL--IVALKEVH----DYQSAF-REIEALQILQNSPNVVVL 77
+G G + V R L DN +VA+K++ D Q F REI+ L+ L + V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + LV+E+L + + + R D + + QI G++
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLD-------ASRLLLYSSQICKGMEYL 143
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
VHRDL N+L+ + +K+ADFG A++L
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G G+ V S +VA+K++ + F E+ ++ Q+ NVV ++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-NVVEMYNSY 95
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNT 141
DE V V+EFL T I + E+ +I + +L + H
Sbjct: 96 LVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIAAVCLAVLQALSVLHAQG 145
Query: 142 IVHRDLKPGNLLIGDDGVLKLADFG 166
++HRD+K ++L+ DG +KL+DFG
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFG 170
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
VGT ++ APEL+ YG EVD+WSL
Sbjct: 186 VGTPYWMAPELI-SRLPYGPEVDIWSL 211
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALK-EVHDYQSAFREIEA--LQILQNSPNVVV 76
+Y + +GSG++ D+Y G ++ VA+K E + IE+ +++Q +
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 67
Query: 77 LHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ + E + V+V+E L L + +K S+ + Q++S ++
Sbjct: 68 I-RWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--------FSLKTVLLLADQMISRIEY 118
Query: 137 CHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQAR 169
H +HRD+KP N L+G ++ + DFG A+
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 154
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S L VA+K + S + RE EAL + Q +
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 73 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 123
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 124 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 183
Query: 192 YQDNM 196
N
Sbjct: 184 ESINF 188
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNV 74
Y+ + +G+GA+S+V +VA+K + S EI L +++ PN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH-PNI 78
Query: 75 VVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V L + + L+++ + +L I E E R I Q+L
Sbjct: 79 VALDD-IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---------FQVLDA 128
Query: 134 VDACHRNTIVHRDLKPGNLL---IGDDGVLKLADFGQARI 170
V H IVHRDLKP NLL + +D + ++DFG +++
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 15/156 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALK-EVHDYQSAFREIEA--LQILQNSPNVVV 76
+Y + +GSG++ D+Y G ++ VA+K E + IE+ +++Q +
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPT 69
Query: 77 LHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ + E + V+V+E L L + +K S+ + Q++S ++
Sbjct: 70 I-RWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--------FSLKTVLLLADQMISRIEY 120
Query: 137 CHRNTIVHRDLKPGNLLIG---DDGVLKLADFGQAR 169
H +HRD+KP N L+G ++ + DFG A+
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ------SAFREIEALQILQNSPNV 74
Y+ + +G+GA+S+V +VA+K + S EI L +++ PN+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKH-PNI 78
Query: 75 VVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V L + + L+++ + +L I E E R I Q+L
Sbjct: 79 VALDD-IYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI---------FQVLDA 128
Query: 134 VDACHRNTIVHRDLKPGNLL---IGDDGVLKLADFGQARI 170
V H IVHRDLKP NLL + +D + ++DFG +++
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM 168
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S L VA+K + S + RE EAL + Q +
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 68 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 118
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 119 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 178
Query: 192 YQDNM 196
N
Sbjct: 179 ESINF 183
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 18/158 (11%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEV-HDYQSAFREIEALQILQNSPNVVVLHE 79
YE+ E +G G+YS + + N A+K + + EIE L PN++ L +
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKD 83
Query: 80 YFWREDEDAVLVLEFLRT--DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ +D V V+ L +L I K E E + I V+
Sbjct: 84 VY--DDGKYVYVVTELXKGGELLDKILRQKFFSER---------EASAVLFTITKTVEYL 132
Query: 138 HRNTIVHRDLKPGNLLI----GDDGVLKLADFGQARIL 171
H +VHRDLKP N+L G+ +++ DFG A+ L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S L VA+K + S + RE EAL + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 71 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 121
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 192 YQDNM 196
N
Sbjct: 182 ESINF 186
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++IL +G+G++ V Y + L ++V LK+V E L I+
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND---ERLMLSIVT 64
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
+ P ++ + F ++ + ++++++ +L +++ +S++ K +
Sbjct: 65 H-PFIIRMWGTF-QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA---------KFYAA 113
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ ++ H I++RDLKP N+L+ +G +K+ DFG A+
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL-LGNEFDAPDGNSQPCE 187
Q++S V I+HRD+K N++I +D +KL DFG A L G F G + C
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCA 197
Query: 188 PNAPYQDNMSEAPQVDL 204
P N P++++
Sbjct: 198 PEV-LMGNPYRGPELEM 213
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 290 TSCVGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
T C GT + APE+L G+ G E+++WSL L
Sbjct: 188 TFC-GTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQS--AFREI--EALQILQ- 69
+++ ++ + SGA+ VYKG + + + VA+KE+ + S A +EI EA +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
++P+V L ++ L L V RE + + G + W VQ
Sbjct: 82 DNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYV-------REHKDNIGSQY--LLNWCVQ 132
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
I G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 133 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 16/156 (10%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQ----SAFREIEALQILQNSPNVV 75
+YE+++ +G+G + R N +VA+K + + + REI + L++ PN+V
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRH-PNIV 78
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
E A+++ +L I + + ED E + + Q++SGV
Sbjct: 79 RFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED---------EARFFFQQLISGVS 129
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
H + HRDLK N L+ LK+ADFG ++
Sbjct: 130 YAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSK 165
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 99 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 156
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 157 RDLVKIGDFGLMRALPQND 175
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 89 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 147 RDLVKIGDFGLMRALPQND 165
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 105 ESKKKREDRGDRGISVGE-IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLA 163
E++K+ E+ D + E + + Q+ G++ + VHRDL N+L+ V+K+
Sbjct: 155 ENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC 214
Query: 164 DFGQARILLGNEFDAPDGNSQ-PCEPNAP 191
DFG AR ++ + GN++ P + AP
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKWMAP 243
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 99 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 156
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 157 RDLVKIGDFGLMRALPQND 175
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 89 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 147 RDLVKIGDFGLMRALPQND 165
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 93 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 150
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 151 RDLVKIGDFGLMRALPQND 169
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 93 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 150
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 151 RDLVKIGDFGLMRALPQND 169
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLS-----DNLIVALKEVHD-----YQSAFREIE 63
R I+ K E+ G GA+ V+ + D ++VA+K + D + RE E
Sbjct: 12 RHNIVLKREL----GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAE 67
Query: 64 ALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DL----------ATVIAESKKKRED 112
L LQ+ +V E + ++V E+++ DL A ++AE E
Sbjct: 68 LLTNLQHEH--IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 113 RGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL 172
+ + + + QI +G+ VHRDL N L+G++ ++K+ DFG +R +
Sbjct: 126 TQSQMLHIAQ------QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY 179
Query: 173 GNEFDAPDGNS 183
++ G++
Sbjct: 180 STDYYRVGGHT 190
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 97 TDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGD 156
T+LA + + + R+ +G +G + R+ VQ+ G+ +HRDL NLL+
Sbjct: 89 TELAPLGSLLDRLRKHQGH--FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT 146
Query: 157 DGVLKLADFGQARILLGNE 175
++K+ DFG R L N+
Sbjct: 147 RDLVKIGDFGLMRALPQND 165
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPN 189
+ ++ +HRDL N L+ D GV+K++DFG +R +L +E + G+ P +
Sbjct: 129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWS 188
Query: 190 AP 191
P
Sbjct: 189 PP 190
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 27 VGSGAYSDVYKGRR--LSDNL--IVALKEVH----DYQSAF-REIEALQILQNSPNVVVL 77
+G G + V R L DN +VA+K++ D Q F REI+ L+ L + V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
+ + LV+E+L + + + R D + + QI G++
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLD-------ASRLLLYSSQICKGMEYL 127
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
VHRDL N+L+ + +K+ADFG A++L
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLL 161
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 38/76 (50%)
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
+G+ ++ + G+ + +HRDL N L+ D +K++DFG R +L ++
Sbjct: 99 KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158
Query: 176 FDAPDGNSQPCEPNAP 191
+ + G P + +AP
Sbjct: 159 YVSSVGTKFPVKWSAP 174
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDE 86
VG G++ +V++ + A+K+V E+ A L +SP +V L+ RE
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGL-SSPRIVPLYGAV-REGP 123
Query: 87 DAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHR 145
+ +E L L +I + EDR ++ Q L G++ H I+H
Sbjct: 124 WVNIFMELLEGGSLGQLIKQMGCLPEDRA---------LYYLGQALEGLEYLHTRRILHG 174
Query: 146 DLKPGNLLIGDDGV-LKLADFGQARILLGNEFDAPDG 181
D+K N+L+ DG L DFG A L PDG
Sbjct: 175 DVKADNVLLSSDGSRAALCDFGHALCL------QPDG 205
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S + VA+K + S + RE EAL + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 71 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KYSLDLASLILYAYQLS 121
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 192 YQDNM 196
N
Sbjct: 182 ESINF 186
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ + SGA+ VYKG + + + VA+KE+ + S N
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 62
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 120
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ + SGA+ VYKG + + + VA+KE+ + S N
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP------------KANK 69
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 70 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 127
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 178
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 14/152 (9%)
Query: 22 EILECVGSGAYSDV----YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVL 77
++L+ +G G + DV Y+G +++ + +K Q+ E + L++S N+V L
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNKVA---VKCIKNDATAQAFLAEASVMTQLRHS-NLVQL 251
Query: 78 HEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDAC 137
E +V E++ S+ + GD + ++ + + ++
Sbjct: 252 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC------LLKFSLDVCEAMEYL 305
Query: 138 HRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
N VHRDL N+L+ +D V K++DFG +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 19 AKYEILECVGSGAYSDVYKGRRLSD----NLIVALKEVHDYQSAFREIEALQILQNSPNV 74
+++ ++ +GSGA+ VYKG + + + VA+ E+ + S N
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSP------------KANK 96
Query: 75 VVLHEYFWREDEDAVLVLEFLRTDLATVIAESKK----------KREDRGDRGISVGEIK 124
+L E + D V L L + + + RE + + G +
Sbjct: 97 EILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQY--LL 154
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNE 175
W VQI G++ +VHRDL N+L+ +K+ DFG A++L E
Sbjct: 155 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 205
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDE 86
VG G++ +V++ + A+K+V E+ A L +SP +V L+ RE
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGL-SSPRIVPLYGAV-REGP 139
Query: 87 DAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHR 145
+ +E L L +I + EDR ++ Q L G++ H I+H
Sbjct: 140 WVNIFMELLEGGSLGQLIKQMGCLPEDRA---------LYYLGQALEGLEYLHTRRILHG 190
Query: 146 DLKPGNLLIGDDGV-LKLADFGQARILLGNEFDAPDG 181
D+K N+L+ DG L DFG A L PDG
Sbjct: 191 DVKADNVLLSSDGSRAALCDFGHALCL------QPDG 221
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
NVV ++ + DE V V+EFL T I + E+ +I + +L
Sbjct: 103 NVVDMYSSYLVGDELWV-VMEFLEGGALTDIVTHTRMNEE---------QIATVCLSVLR 152
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+ H ++HRD+K ++L+ DG +KL+DFG
Sbjct: 153 ALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFG 186
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLA 320
VGT ++ APE++ YG EVD+WSL
Sbjct: 202 VGTPYWMAPEVI-SRLPYGTEVDIWSLG 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 16 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 68
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 128
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 129 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 10 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 62
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++EFL + K+R D ++ ++ QI
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHI-------KLLQYTSQICK 128
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 3 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 55
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 56 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 115
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 116 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 10 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 62
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 63 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 122
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 123 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLS---DNLIVALKE------VHDYQSAFREIEA 64
RPE +E+L +G G Y V++ R+++ I A+K V + +
Sbjct: 15 RPEC---FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 65 LQILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE 122
IL+ P +V L Y ++ L+LE+L + E + GI + +
Sbjct: 72 RNILEEVKHPFIVDL-IYAFQTGGKLYLILEYLSGGELFMQLERE---------GIFMED 121
Query: 123 IK-RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ +I + H+ I++RDLKP N+++ G +KL DFG +
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 9 WSIHTRPEIIAKYEILECVGSGAYSDV----YKGRRLSDNLIVALKEVHDYQSAFREIEA 64
W+++ + + ++L+ +G G + DV Y+G +++ + +K Q+ E
Sbjct: 16 WALNMK-----ELKLLQTIGKGEFGDVMLGDYRGNKVA---VKCIKNDATAQAFLAEASV 67
Query: 65 LQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIK 124
+ L++S N+V L E +V E++ S+ + GD +
Sbjct: 68 MTQLRHS-NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC------LL 120
Query: 125 RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ + + ++ N VHRDL N+L+ +D V K++DFG +
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 9 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 61
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 85/179 (47%), Gaps = 22/179 (12%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 7 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 59
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKRE 111
IE L +++ N +VV L + + ++++E + R DL + + + + E
Sbjct: 60 MRERIEFLNEASVMKEFNCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPEME 118
Query: 112 DRGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 119 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 9 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 61
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 62 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 121
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 122 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 1 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 53
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 54 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 113
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 114 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 25/168 (14%)
Query: 14 RPEIIAKYEILECVGSGAYSDVYKGRRLS---DNLIVALKE------VHDYQSAFREIEA 64
RPE +E+L +G G Y V++ R+++ I A+K V + +
Sbjct: 15 RPEC---FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE 71
Query: 65 LQILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGE 122
IL+ P +V L Y ++ L+LE+L + E + GI + +
Sbjct: 72 RNILEEVKHPFIVDL-IYAFQTGGKLYLILEYLSGGELFMQLERE---------GIFMED 121
Query: 123 IK-RWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ +I + H+ I++RDLKP N+++ G +KL DFG +
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 82/185 (44%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S + VA+K + S + RE EAL + Q +
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 451 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KFSLDLASLILYAYQLS 501
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + + P + AP
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 192 YQDNM 196
N
Sbjct: 562 ESINF 566
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 38 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 90
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + + E+
Sbjct: 91 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMEN 150
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG R
Sbjct: 151 NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 19/160 (11%)
Query: 27 VGSGAYSDVYKGRRL---SDNLIVALK------EVHDYQSAFREIEALQILQNSPNVVVL 77
+G G + VY G + + + A+K E+ ++ RE ++ L N PNV+ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-NHPNVLAL 87
Query: 78 HEYFWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDA 136
+ ++L ++ DL I + R +V ++ + +Q+ G++
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQ--------RNPTVKDLISFGLQVARGMEY 139
Query: 137 CHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
VHRDL N ++ + +K+ADFG AR +L E+
Sbjct: 140 LAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Query: 18 IAKYEILECVGSGAYSDV----YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPN 73
+ + ++L+ +G G + DV Y+G +++ + +K Q+ E + L++S N
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYRGNKVA---VKCIKNDATAQAFLAEASVMTQLRHS-N 60
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
+V L E +V E++ S+ + GD + ++ + +
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC------LLKFSLDVCEA 114
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
++ N VHRDL N+L+ +D V K++DFG +
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 27 VGSGAY-----SDVYKGRRLSDNLIVALKEVHD------YQSAFREIEALQILQNSPNVV 75
+G GA+ +D + + + VA+K + + +++ E++ L + + NVV
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKK------KREDRGDRGISVGEIKRWMVQ 129
L + ++++EF + + SK+ K ED +++ + + Q
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ G++ +HRDL N+L+ + V+K+ DFG AR
Sbjct: 157 VAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDE 86
+G G++ +V++ + A+K+V E+ A L +SP +V L+ RE
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGL-SSPRIVPLYGAV-REGP 137
Query: 87 DAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHR 145
+ +E L L +I + EDR ++ Q L G++ H I+H
Sbjct: 138 WVNIFMELLEGGSLGQLIKQMGCLPEDRA---------LYYLGQALEGLEYLHTRRILHG 188
Query: 146 DLKPGNLLIGDDGV-LKLADFGQARILLGNEFDAPDG 181
D+K N+L+ DG L DFG A L PDG
Sbjct: 189 DVKADNVLLSSDGSRAALCDFGHALCL------QPDG 219
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 21/158 (13%)
Query: 25 ECVGSGAYSDVYKGRRLSDN----LIVALKEVHDYQSAFREIEALQIL-------QNSPN 73
+ +G+G + +VYKG + + + VA+K + ++ + E + + L Q S +
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTL---KAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
++ E + + +++ E++ A K RE G+ SV ++ + I +G
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENG-----ALDKFLREKDGE--FSVLQLVGMLRGIAAG 159
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ VHRDL N+L+ + V K++DFG +R+L
Sbjct: 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 125
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 104 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 156
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 195
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 125
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 80 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 132
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 171
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 128
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARI 170
QI G+ + +HRDL+ N+L+ V K+ADFG AR+
Sbjct: 286 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 78 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 130
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 169
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 79 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 131
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 170
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ +D V+K+ADFG AR
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 71 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 123
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 162
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S + VA+K + S + RE EAL + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 71 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KFSLDLASLILYAYQLS 121
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ + +KL DFG +R + + P + AP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAP 181
Query: 192 YQDNM 196
N
Sbjct: 182 ESINF 186
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 143
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S + VA+K + S + RE EAL + Q +
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 71 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KFSLDLASLILYAYQLS 121
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ +KL DFG +R + + + P + AP
Sbjct: 122 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 181
Query: 192 YQDNM 196
N
Sbjct: 182 ESINF 186
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 91 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 143
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 182
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 72 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 124
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 163
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 71/160 (44%), Gaps = 21/160 (13%)
Query: 21 YEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDY------QSAFREIEALQILQNSPNV 74
+E E +G+GA+S+V + + A+K + S EI L+ +++ N+
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHE-NI 82
Query: 75 VVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V L E + LV++ + +L I E E I Q+L
Sbjct: 83 VAL-EDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR---------QVLDA 132
Query: 134 VDACHRNTIVHRDLKPGNLLI---GDDGVLKLADFGQARI 170
V HR IVHRDLKP NLL ++ + ++DFG +++
Sbjct: 133 VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM 172
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 73 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 125
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 164
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 161
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 162 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 206
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 77 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 129
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 168
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGN 174
I++ ++ + Q+ G++ +HRDL N+L+ ++ V+K+ DFG AR + N
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 138
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 139 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+R +++G++ + QI G+ ++VHRDL N+L+ + +K++DFG +R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 143
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFR----EIEALQILQNSPN-- 73
+YEI +G G++ V K + VA+K + + ++ E+ L+++
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 95
Query: 74 ---VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
+V L +F + LV E L +L ++ + RG+S+ +++ Q+
Sbjct: 96 KYYIVHLKRHFMFRNH-LCLVFEMLSYNLYDLL-------RNTNFRGVSLNLTRKFAQQM 147
Query: 131 LSGVD--ACHRNTIVHRDLKPGNLLIGDD--GVLKLADFGQA 168
+ + A +I+H DLKP N+L+ + +K+ DFG +
Sbjct: 148 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 189
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ +R++R+PE+L G Y L +D+WSL L
Sbjct: 200 IQSRFYRSPEVLLG-MPYDLAIDMWSLGCIL 229
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 141
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 142 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 186
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 142
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 187
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFR----EIEALQILQNSPN-- 73
+YEI +G G++ V K + VA+K + + ++ E+ L+++
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 74 ---VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
+V L +F + LV E L +L ++ + RG+S+ +++ Q+
Sbjct: 115 KYYIVHLKRHFMFRNH-LCLVFEMLSYNLYDLL-------RNTNFRGVSLNLTRKFAQQM 166
Query: 131 LSGVD--ACHRNTIVHRDLKPGNLLIGDD--GVLKLADFGQA 168
+ + A +I+H DLKP N+L+ + +K+ DFG +
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ +R++R+PE+L G Y L +D+WSL L
Sbjct: 219 IQSRFYRSPEVLLG-MPYDLAIDMWSLGCIL 248
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 162
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 163 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 207
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 135
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 136 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 180
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 143
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 144 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 188
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 140
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEF 176
G+ VHRDL N ++ + +K+ADFG AR + E+
Sbjct: 141 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 185
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDN---LIVALKEVHDYQS-AFREI---EALQILQ-NS 71
+ E+ C+G G + DV++G +S + VA+K + S + RE EAL + Q +
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 72 PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
P++V L E+ V ++ L T + E + + R + + + + Q+
Sbjct: 451 PHIVKLIGVI---TENPVWIIMELCT-----LGELRSFLQVR-KFSLDLASLILYAYQLS 501
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQPCEPNAP 191
+ + VHRD+ N+L+ +KL DFG +R + + + P + AP
Sbjct: 502 TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAP 561
Query: 192 YQDNM 196
N
Sbjct: 562 ESINF 566
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDE 86
+G G++ +V++ A+K+V E+ A L SP +V L+ RE
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGL-TSPRIVPLYGAV-REGP 158
Query: 87 DAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHR 145
+ +E L L ++ E EDR ++ Q L G++ H I+H
Sbjct: 159 WVNIFMELLEGGSLGQLVKEQGCLPEDRA---------LYYLGQALEGLEYLHSRRILHG 209
Query: 146 DLKPGNLLIGDDGV-LKLADFGQARILLGNEFDAPDG 181
D+K N+L+ DG L DFG A L PDG
Sbjct: 210 DVKADNVLLSSDGSHAALCDFGHAVCL------QPDG 240
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNS------ 71
++ +I E +G+G + +V +GR + + + + + E + + L +
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 72 --PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
PN++ L E +++ EF+ A R + G +V ++ +
Sbjct: 75 EHPNIIRL-EGVVTNSMPVMILTEFMENG-----ALDSFLRLNDGQ--FTVIQLVGMLRG 126
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNS 183
I SG+ + VHRDL N+L+ + V K++DFG +R L N D + +S
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 84/179 (46%), Gaps = 22/179 (12%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 3 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 55
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKRE 111
IE L +++ N +VV L + + ++++E + R DL + + + + E
Sbjct: 56 MRERIEFLNEASVMKEFNCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYLRSLRPEME 114
Query: 112 DRGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+ S+ ++ + +I G+ + N VHRDL N + +D +K+ DFG R
Sbjct: 115 NNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDE 86
+G G++ +V++ A+K+V E+ A L SP +V L+ RE
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGL-TSPRIVPLYGAV-REGP 139
Query: 87 DAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHR 145
+ +E L L ++ E EDR ++ Q L G++ H I+H
Sbjct: 140 WVNIFMELLEGGSLGQLVKEQGCLPEDRA---------LYYLGQALEGLEYLHSRRILHG 190
Query: 146 DLKPGNLLIGDDGV-LKLADFGQARILLGNEFDAPDG 181
D+K N+L+ DG L DFG A L PDG
Sbjct: 191 DVKADNVLLSSDGSHAALCDFGHAVCL------QPDG 221
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 65
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 66 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 115
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S ++ H +V+RD+K NL++ DG +K+ DFG +
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 60
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 110
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S ++ H +V+RD+K NL++ DG +K+ DFG +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 60
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 110
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S ++ H +V+RD+K NL++ DG +K+ DFG +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 74/162 (45%), Gaps = 21/162 (12%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFR----EIEALQILQNSPN-- 73
+YEI +G G++ V K + VA+K + + ++ E+ L+++
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEM 114
Query: 74 ---VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQI 130
+V L +F + LV E L +L ++ + RG+S+ +++ Q+
Sbjct: 115 KYYIVHLKRHFMFRNH-LCLVFEMLSYNLYDLL-------RNTNFRGVSLNLTRKFAQQM 166
Query: 131 LSGVD--ACHRNTIVHRDLKPGNLLIGDDG--VLKLADFGQA 168
+ + A +I+H DLKP N+L+ + +K+ DFG +
Sbjct: 167 CTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS 208
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSLAAYL 323
+ +R++R+PE+L G Y L +D+WSL L
Sbjct: 219 IQSRFYRSPEVLLG-MPYDLAIDMWSLGCIL 248
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESK----- 107
++++ E++ L + + NVV L + ++++EF + +L+T + +
Sbjct: 74 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 133
Query: 108 -KKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
K ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DFG
Sbjct: 134 YKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFG 193
Query: 167 QAR 169
AR
Sbjct: 194 LAR 196
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 60
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 110
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S ++ H +V+RD+K NL++ DG +K+ DFG +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 30/160 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 63
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 64 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 113
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
+I+S ++ H +V+RD+K NL++ DG +K+ DFG
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 153
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 66/158 (41%), Gaps = 25/158 (15%)
Query: 25 ECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREI----EALQILQ--------NSP 72
E +G G + VY G L ++ K++H + I E Q L + P
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDG----KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQIL 131
NV+ L R + ++VL +++ DL I +V ++ + +Q+
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP--------TVKDLIGFGLQVA 142
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
G+ VHRDL N ++ + +K+ADFG AR
Sbjct: 143 KGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 60
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 110
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S ++ H +V+RD+K NL++ DG +K+ DFG +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+R +++G++ + QI G+ +VHRDL N+L+ + +K++DFG +R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 21 YEILECVGSGAYSDV-----------YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQ 69
++ L+ +G G + V Y + L +I+A EV + R +LQ
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESR------VLQ 60
Query: 70 NS--PNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRW 126
N+ P + L +Y ++ + V+E+ +L ++ + E+R + +
Sbjct: 61 NTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERA---------RFY 110
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I+S ++ H +V+RD+K NL++ DG +K+ DFG +
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 81/181 (44%), Gaps = 26/181 (14%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 16 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 68
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED 112
IE L +++ N +VV L + V++ R DL + + + R
Sbjct: 69 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL---RSLRPA 125
Query: 113 RGDRGI----SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQA 168
+ + S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG
Sbjct: 126 MANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT 185
Query: 169 R 169
R
Sbjct: 186 R 186
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 115 DRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+R +++G++ + QI G+ +VHRDL N+L+ + +K++DFG +R
Sbjct: 144 ERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVL--VLEFLRTDLATVIAESKKKREDRGD 115
A EI+ L + PNV+ Y+ E D L LE +L ++ ESK ++
Sbjct: 55 ALMEIKLLTESDDHPNVI---RYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLK 110
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG 155
I + QI SGV H I+HRDLKP N+L+
Sbjct: 111 LQKEYNPIS-LLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVL--VLEFLRTDLATVIAESKKKREDRGD 115
A EI+ L + PNV+ Y+ E D L LE +L ++ ESK ++
Sbjct: 55 ALMEIKLLTESDDHPNVI---RYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLK 110
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG 155
I + QI SGV H I+HRDLKP N+L+
Sbjct: 111 LQKEYNPIS-LLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L + K+R D ++ ++ QI
Sbjct: 74 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHI-------KLLQYTSQICK 126
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HR+L N+L+ ++ +K+ DFG ++L
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVL 165
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 8 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 60
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHRDL N ++ D +K+ DFG R
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 90 LVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLK 148
L++EFL + L + ++K K I++ + ++ VQI G+D VHRDL
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNK--------INLKQQLKYAVQICKGMDYLGSRQYVHRDLA 153
Query: 149 PGNLLIGDDGVLKLADFGQARIL 171
N+L+ + +K+ DFG + +
Sbjct: 154 ARNVLVESEHQVKIGDFGLTKAI 176
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 85/182 (46%), Gaps = 28/182 (15%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + R +I E+ G G++ VY+G ++ ++ VA+K V++ S
Sbjct: 6 VPDEWEV-AREKITMSREL----GQGSFGMVYEG--VAKGVVKDEPETRVAIKTVNEAAS 58
Query: 58 AFREIEALQ---ILQ--NSPNVVVLHEYFWREDEDAVLVLEFL-RTDLATVIAESKKKRE 111
IE L +++ N +VV L + + ++++E + R DL + + + R
Sbjct: 59 MRERIEFLNEASVMKEFNCHHVVRLLGVV-SQGQPTLVIMELMTRGDLKSYL---RSLRP 114
Query: 112 DRGDRGI----SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQ 167
+ + S+ ++ + +I G+ + N VHRDL N ++ +D +K+ DFG
Sbjct: 115 AMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGM 174
Query: 168 AR 169
R
Sbjct: 175 TR 176
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 8 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 60
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHRDL N ++ D +K+ DFG R
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 90 LVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLK 148
L++EFL + L + ++K K I++ + ++ VQI G+D VHRDL
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNK--------INLKQQLKYAVQICKGMDYLGSRQYVHRDLA 141
Query: 149 PGNLLIGDDGVLKLADFGQARIL 171
N+L+ + +K+ DFG + +
Sbjct: 142 ARNVLVESEHQVKIGDFGLTKAI 164
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVL--VLEFLRTDLATVIAESKKKREDRGD 115
A EI+ L + PNV+ Y+ E D L LE +L ++ ESK ++
Sbjct: 73 ALMEIKLLTESDDHPNVI---RYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLK 128
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG 155
I + QI SGV H I+HRDLKP N+L+
Sbjct: 129 LQKEYNPIS-LLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 5 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 57
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 58 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 117
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHRDL N ++ D +K+ DFG R
Sbjct: 118 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 8 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 60
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHRDL N ++ D +K+ DFG R
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 58 AFREIEALQILQNSPNVVVLHEYFWREDEDAVL--VLEFLRTDLATVIAESKKKREDRGD 115
A EI+ L + PNV+ Y+ E D L LE +L ++ ESK ++
Sbjct: 73 ALMEIKLLTESDDHPNVI---RYYCSETTDRFLYIALELCNLNLQDLV-ESKNVSDENLK 128
Query: 116 RGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG 155
I + QI SGV H I+HRDLKP N+L+
Sbjct: 129 LQKEYNPIS-LLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 8 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 60
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHRDL N ++ D +K+ DFG R
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V+V+ EY D +L FLR AE+ +ED R + + ++ + Q+ G
Sbjct: 125 VLVITEYCCYGD-----LLNFLRRK-----AEADLDKED--GRPLELRDLLHFSSQVAQG 172
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQ-PCEPNAP 191
+ +HRD+ N+L+ + V K+ DFG AR ++ + GN++ P + AP
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 231
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V+V+ EY D +L FLR AE+ +ED R + + ++ + Q+ G
Sbjct: 117 VLVITEYCCYGD-----LLNFLRRK-----AEADLDKED--GRPLELRDLLHFSSQVAQG 164
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQ-PCEPNAP 191
+ +HRD+ N+L+ + V K+ DFG AR ++ + GN++ P + AP
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 223
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+K+ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
I + ++ + QI G+ H +HRDL N+L+ +D ++K+ DFG A+
Sbjct: 131 IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 22 EILECVGSGAYSDVYKGRR--LSDNL--IVALKEV-HDYQSAFR----EIEALQILQNSP 72
+ L+ +G G + V R L DN +VA+K++ H + R EIE L+ LQ+
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 73 NVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILS 132
V + + L++E+L ++ +R D ++ ++ QI
Sbjct: 76 IVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHI-------KLLQYTSQICK 128
Query: 133 GVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
G++ +HRDL N+L+ ++ +K+ DFG ++L
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVL 167
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 166 GQAR 169
G AR
Sbjct: 193 GLAR 196
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 15/163 (9%)
Query: 20 KYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQSAFREIEALQILQNSP 72
K +L +G G++ VY+G + ++I VA+K V++ S IE L
Sbjct: 17 KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMK 74
Query: 73 NVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKREDRGDRGI-SVGEIKRW 126
H + + ++V+E + DL + + + + E+ R ++ E+ +
Sbjct: 75 GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQM 134
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I G+ + VHRDL N ++ D +K+ DFG R
Sbjct: 135 AAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 166 GQAR 169
G AR
Sbjct: 193 GLAR 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 75 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 135 YKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 194
Query: 166 GQAR 169
G AR
Sbjct: 195 GLAR 198
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 41/186 (22%)
Query: 17 IIAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVV 76
I + ++++ +G G Y +V+ G+ + + V + + S FRE E Q V++
Sbjct: 35 IAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQ------TVLM 88
Query: 77 LHEYFWREDEDAVLVLEFLRTD-----------LATVIAESKKKREDRGDRGISVGEIKR 125
HE +L F+ D L T E+ + + + +
Sbjct: 89 RHEN----------ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK 138
Query: 126 WMVQILSGVDACHRNT----------IVHRDLKPGNLLIGDDGVLKLADFGQARILLG-- 173
+SG+ CH +T I HRDLK N+L+ +G +AD G A +
Sbjct: 139 LAYSSVSGL--CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDT 196
Query: 174 NEFDAP 179
NE D P
Sbjct: 197 NEVDIP 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--------DYQSAFREIEALQILQ 69
+ + L +G G++ V R + + A+K + D + E L +
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 78
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
P + LH F D V+E++ DL I + + +E +
Sbjct: 79 KPPFLTQLHSCFQTMDR-LYFVMEYVNGGDLMYHIQQVGRFKEPHA---------VFYAA 128
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I G+ I++RDLK N+++ +G +K+ADFG +
Sbjct: 129 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 169
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 19/161 (11%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVH--------DYQSAFREIEALQILQ 69
+ + L +G G++ V R + + A+K + D + E L +
Sbjct: 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG 399
Query: 70 NSPNVVVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMV 128
P + LH F D V+E++ DL I + + +E +
Sbjct: 400 KPPFLTQLHSCFQTMDR-LYFVMEYVNGGDLMYHIQQVGRFKEPHA---------VFYAA 449
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+I G+ I++RDLK N+++ +G +K+ADFG +
Sbjct: 450 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK 490
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 18 IAKYEILECVGSGAYSDVYKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNS------ 71
++ +I E +G+G + +V +GR + + + + + E + + L +
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 72 --PNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQ 129
PN++ L E +++ EF+ A R + G +V ++ +
Sbjct: 73 EHPNIIRL-EGVVTNSMPVMILTEFMENG-----ALDSFLRLNDGQ--FTVIQLVGMLRG 124
Query: 130 ILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFD 177
I SG+ + VHRDL N+L+ + V K++DFG +R L N D
Sbjct: 125 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD 172
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 133 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 192
Query: 166 GQAR 169
G AR
Sbjct: 193 GLAR 196
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 110 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 169
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 170 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 229
Query: 166 GQAR 169
G AR
Sbjct: 230 GLAR 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+G++ H N +HRD+K N+L+ + K++DFG AR
Sbjct: 144 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+G++ H N +HRD+K N+L+ + K++DFG AR
Sbjct: 144 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 181
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 111 -EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+D +++ + + Q+ G++ +HRDL N+L+ + V+K+ DFG AR
Sbjct: 133 YKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 73 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
Query: 111 -EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+D +++ + + Q+ G++ +HRDL N+L+ + V+K+ DFG AR
Sbjct: 133 YKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKEV-----HDYQSAFREIEALQILQNSPNVVVLHEYF 81
+G GA++ V L + A+K + H FRE+E L Q NV+ L E+F
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 82 WREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMV--QILSGVDACHR 139
ED LV E +R ++++ K+R E++ +V + S +D H
Sbjct: 81 EEEDR-FYLVFEKMRG--GSILSHIHKRRH--------FNELEASVVVQDVASALDFLHN 129
Query: 140 NTIVHRDLKPGNLLI---GDDGVLKLADFG 166
I HRDLKP N+L +K+ DFG
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFG 159
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+G++ H N +HRD+K N+L+ + K++DFG AR
Sbjct: 138 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 175
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 132 SGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
+G++ H N +HRD+K N+L+ + K++DFG AR
Sbjct: 135 NGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLAR 172
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 57/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + ++++EF + + SK+
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 123
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 166 GQAR 169
G AR
Sbjct: 184 GLAR 187
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 24 LECVGSGAYSDVYKGRRL----SDNLIVALKEVHD------YQSAFREIEALQILQNSPN 73
L+ +GSG + V+KG + S + V +K + D +Q+ + A+ L ++
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V +L LV ++L L +++ R+ RG G + + W VQI G
Sbjct: 96 VRLLGLC---PGSSLQLVTQYL--PLGSLLDHV---RQHRGALGPQL--LLNWGVQIAKG 145
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ + +VHR+L N+L+ +++ADFG A +L
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 74 VVVLHEYFWREDEDAVLVLEFLR-------TDLATVIAESKKKREDRGDRGISVGEIKRW 126
V+V+ EY D +L FLR TD A IA S +S ++ +
Sbjct: 125 VLVITEYCCYGD-----LLNFLRRKSRVLETDPAFAIANST----------LSTRDLLHF 169
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQ-P 185
Q+ G+ +HRD+ N+L+ + V K+ DFG AR ++ + GN++ P
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 186 CEPNAP 191
+ AP
Sbjct: 230 VKWMAP 235
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 14/151 (9%)
Query: 20 KYEILECVGSGAYSDVYKGR---RLSDNLIVALKEVHDYQSAF-REIEALQILQNSPNVV 75
+ EI E +G G + VY GR ++ LI ++ D AF RE+ A + ++ NVV
Sbjct: 34 QLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHE-NVV 92
Query: 76 VLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVD 135
+ A++ L +V+ ++K + R I+ +I+ G+
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQ--------EIVKGMG 144
Query: 136 ACHRNTIVHRDLKPGNLLIGDDGVLKLADFG 166
H I+H+DLK N+ D+G + + DFG
Sbjct: 145 YLHAKGILHKDLKSKNVFY-DNGKVVITDFG 174
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 89 VLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDL 147
+++L F++ DL + S R + + + R+MV I G++ +HRDL
Sbjct: 107 MVILPFMKHGDLHAFLLAS---RIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDL 163
Query: 148 KPGNLLIGDDGVLKLADFGQARILLGNEF 176
N ++ +D + +ADFG +R + ++
Sbjct: 164 AARNCMLAEDMTVCVADFGLSRKIYSGDY 192
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 12/131 (9%)
Query: 36 YKGRRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFL 95
+ GR+++ ++ L++ + F E+ ++ Q+ NVV +++ + +E VL +EFL
Sbjct: 68 HSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHF-NVVEMYKSYLVGEELWVL-MEFL 124
Query: 96 RTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIG 155
+ T I + E+ +I +L + H ++HRD+K ++L+
Sbjct: 125 QGGALTDIVSQVRLNEE---------QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Query: 156 DDGVLKLADFG 166
DG +KL+DFG
Sbjct: 176 LDGRVKLSDFG 186
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 293 VGTRWFRAPELLYGSTSYGLEVDLWSL 319
VGT ++ APE++ S Y EVD+WSL
Sbjct: 202 VGTPYWMAPEVISRSL-YATEVDIWSL 227
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 129 QILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
Q+ G++ +HRDL N+L+ ++ V+++ADFG AR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 24 LECVGSGAYSDVYKGRRL----SDNLIVALKEVHD------YQSAFREIEALQILQNSPN 73
L+ +GSG + V+KG + S + V +K + D +Q+ + A+ L ++
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V +L LV ++L L +++ R+ RG G + + W VQI G
Sbjct: 78 VRLLGLC---PGSSLQLVTQYL--PLGSLLDHV---RQHRGALGPQL--LLNWGVQIAKG 127
Query: 134 VDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARIL 171
+ + +VHR+L N+L+ +++ADFG A +L
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLL 165
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 40/182 (21%)
Query: 27 VGSGAYSDVYKGRRLSDNLIVALKE------------VHDYQSAFREIEALQILQNSPNV 74
+G G + V+KGR + D +VA+K + +Q RE+ + L N PN+
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-NHPNI 85
Query: 75 VVLHEYFWREDEDAVLVLEFLRT-DLATVIAESKKKREDRGDRGISVGEIKRWMVQILSG 133
V L+ +V+EF+ DL + + I R M+ I G
Sbjct: 86 VKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHP--------IKWSVKLRLMLDIALG 134
Query: 134 VDACHRNT--IVHRDLKPGNLLI-----GDDGVLKLADFGQARI-------LLGN-EFDA 178
++ IVHRDL+ N+ + K+ADFG ++ LLGN ++ A
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMA 194
Query: 179 PD 180
P+
Sbjct: 195 PE 196
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 123 IKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGV--LKLADFGQAR 169
I M QI S + H I HRD+KP N L + +KL DFG ++
Sbjct: 170 ISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSK 218
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 257 FATCTTSDVEDDLFKGTYSYDAEDGGDGRQGALTSCVGTRWFRAPELLYGST-SYGLEVD 315
F T E L S + +G +T+ GT +F APE+L + SYG + D
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258
Query: 316 LWSLAAYLQ 324
WS L
Sbjct: 259 AWSAGVLLH 267
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 20/202 (9%)
Query: 1 MEQPLPKSWSIHTRPEI-IAKYEILECVGSGAYSDVYKGRRLS-----DNLIVALKEVHD 54
ME PL EI ++ +E +G + VYKG VA+K + D
Sbjct: 7 MEMPLINQHKQAKLKEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD 66
Query: 55 -----YQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKK 109
+ FR L+ PNVV L ++ +++ DL + +
Sbjct: 67 KAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLV-MRSP 125
Query: 110 REDRG----DRGISVG----EIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLK 161
D G DR + + + QI +G++ + +VH+DL N+L+ D +K
Sbjct: 126 HSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVK 185
Query: 162 LADFGQARILLGNEFDAPDGNS 183
++D G R + ++ GNS
Sbjct: 186 ISDLGLFREVYAADYYKLLGNS 207
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 23/126 (18%)
Query: 74 VVVLHEYFWREDEDAVLVLEFLR-------TDLATVIAESKKKREDRGDRGISVGEIKRW 126
V+V+ EY D +L FLR TD A IA S D + +
Sbjct: 125 VLVITEYCCYGD-----LLNFLRRKSRVLETDPAFAIANSTASTRD----------LLHF 169
Query: 127 MVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQ-P 185
Q+ G+ +HRD+ N+L+ + V K+ DFG AR ++ + GN++ P
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 186 CEPNAP 191
+ AP
Sbjct: 230 VKWMAP 235
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + +++ EF + + SK+
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 166 GQAR 169
G AR
Sbjct: 184 GLAR 187
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Query: 74 VVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKRED------RGDRGISVGEIKRWM 127
V+V+ EY D +L FLR ++ S +D R + + ++ +
Sbjct: 110 VLVITEYCCYGD-----LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFS 164
Query: 128 VQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILLGNEFDAPDGNSQ-PC 186
Q+ G+ +HRD+ N+L+ + V K+ DFG AR ++ + GN++ P
Sbjct: 165 SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 224
Query: 187 EPNAP 191
+ AP
Sbjct: 225 KWMAP 229
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEF 176
I + ++ + QI G+ H +HR+L N+L+ +D ++K+ DFG A+ + G+E+
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 8 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 60
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 120
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHR+L N ++ D +K+ DFG R
Sbjct: 121 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 5 LPKSWSIHTRPEIIAKYEILECVGSGAYSDVYKGRRLSDNLI-------VALKEVHDYQS 57
+P W + K +L +G G++ VY+G + ++I VA+K V++ S
Sbjct: 9 VPDEWEVSRE-----KITLLRELGQGSFGMVYEGN--ARDIIKGEAETRVAVKTVNESAS 61
Query: 58 AFREIEALQILQNSPNVVVLHEY----FWREDEDAVLVLEFL-RTDLATVIAESKKKRED 112
IE L H + + ++V+E + DL + + + + E+
Sbjct: 62 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAEN 121
Query: 113 RGDRGI-SVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQAR 169
R ++ E+ + +I G+ + VHR+L N ++ D +K+ DFG R
Sbjct: 122 NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + +++ EF + + SK+
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 166 GQAR 169
G AR
Sbjct: 184 GLAR 187
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 54 DYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIAESKKKR--- 110
++++ E++ L + + NVV L + +++ EF + + SK+
Sbjct: 64 EHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVP 123
Query: 111 -----EDRGDRGISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADF 165
ED +++ + + Q+ G++ +HRDL N+L+ + V+K+ DF
Sbjct: 124 YKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDF 183
Query: 166 GQAR 169
G AR
Sbjct: 184 GLAR 187
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 118 ISVGEIKRWMVQILSGVDACHRNTIVHRDLKPGNLLIGDDGVLKLADFGQARILL-GNEF 176
I + ++ + QI G+ H +HR+L N+L+ +D ++K+ DFG A+ + G+E+
Sbjct: 114 IGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,735,160
Number of Sequences: 62578
Number of extensions: 480251
Number of successful extensions: 3120
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 1000
Number of HSP's gapped (non-prelim): 1569
length of query: 326
length of database: 14,973,337
effective HSP length: 99
effective length of query: 227
effective length of database: 8,778,115
effective search space: 1992632105
effective search space used: 1992632105
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)