BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020469
MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF
VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS
LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL
SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEAT
LKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEERCLWDVKRRLAICGDFC
VSPNVEGAILSGLDAASKLTEILSCL

High Scoring Gene Products

Symbol, full name Information P value
AT1G55980 protein from Arabidopsis thaliana 1.7e-98
AT3G04650 protein from Arabidopsis thaliana 3.7e-26
PSPPH_1014
Uncharacterized protein
protein from Pseudomonas syringae pv. phaseolicola 1448A 4.9e-21
PFL_5143
FAD dependent oxidoreductase
protein from Pseudomonas protegens Pf-5 1.0e-20

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020469
        (326 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2012030 - symbol:AT1G56000 species:3702 "Arabi...  1209  5.7e-123  1
TAIR|locus:2012005 - symbol:AT1G55980 species:3702 "Arabi...   978  1.7e-98   1
TAIR|locus:2084903 - symbol:AT3G04650 species:3702 "Arabi...   299  3.7e-26   1
UNIPROTKB|Q48MT7 - symbol:PSPPH_1014 "Uncharacterized pro...   247  4.9e-21   1
UNIPROTKB|Q4K6B1 - symbol:PFL_5143 "FAD dependent oxidore...   244  1.0e-20   1


>TAIR|locus:2012030 [details] [associations]
            symbol:AT1G56000 species:3702 "Arabidopsis thaliana"
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] EMBL:CP002684
            UniGene:At.48312 UniGene:At.71152 eggNOG:COG3380 UniGene:At.48311
            EMBL:AY069897 EMBL:AY142026 EMBL:AK316780 IPI:IPI00533415
            RefSeq:NP_175996.2 ProteinModelPortal:Q8VYV2 SMR:Q8VYV2
            IntAct:Q8VYV2 PRIDE:Q8VYV2 EnsemblPlants:AT1G56000.1 GeneID:842051
            KEGG:ath:AT1G56000 TAIR:At1g56000 InParanoid:Q8VYV2 KO:K06955
            OMA:APCWTLM PhylomeDB:Q8VYV2 ProtClustDB:CLSN2690468
            Genevestigator:Q8VYV2 Uniprot:Q8VYV2
        Length = 384

 Score = 1209 (430.6 bits), Expect = 5.7e-123, P = 5.7e-123
 Identities = 225/326 (69%), Positives = 265/326 (81%)

Query:     1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
             MSQRRE  EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK   GSFD  S KF
Sbjct:    59 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 118

Query:    61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
             + IQQ+G  KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++  W ++   G++
Sbjct:   119 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 178

Query:   121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
             LG+F+GVVASDKN+VSPRF  VTG PPPLDL+  P+LA KL+ IPV PCF+LMLAF EPL
Sbjct:   179 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 238

Query:   181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEAT 240
             SSIPVKG SF++SE+LSWAHC+S+KPGRS +SERW+LHST DYA +VIA+TGLQK S  T
Sbjct:   239 SSIPVKGLSFKNSEILSWAHCESTKPGRSTDSERWILHSTPDYANSVIAKTGLQKLSSET 298

Query:   241 LKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEERCLWDVKRRLAICGDFC 300
             L K++EEMF+EFQ +GL   LP F KAHRWGSAFPA SIA EERCLWD  R LAICGDFC
Sbjct:   299 LNKISEEMFKEFQCSGLVSSLPFFMKAHRWGSAFPAKSIAVEERCLWDRNRNLAICGDFC 358

Query:   301 VSPNVEGAILSGLDAASKLTEILSCL 326
             VSPNVEGAILSGL AASKL +  SCL
Sbjct:   359 VSPNVEGAILSGLAAASKLLQTSSCL 384


>TAIR|locus:2012005 [details] [associations]
            symbol:AT1G55980 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] InterPro:IPR016040 EMBL:CP002684 GO:GO:0000166
            Gene3D:3.40.50.720 UniGene:At.71152 IPI:IPI00532476
            RefSeq:NP_175994.2 UniGene:At.48311 ProteinModelPortal:F4I3I1
            SMR:F4I3I1 EnsemblPlants:AT1G55980.1 GeneID:842049
            KEGG:ath:AT1G55980 OMA:ENAFRCK PhylomeDB:F4I3I1 Uniprot:F4I3I1
        Length = 466

 Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
 Identities = 179/270 (66%), Positives = 218/270 (80%)

Query:     1 MSQRRETSEDGNEMLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKF 60
             MSQRRE  EDG E++FDHGAPFF V+N+D +ALV EWES G V+EWK   GSFD  S KF
Sbjct:   197 MSQRREIGEDGKELMFDHGAPFFCVSNSDAMALVHEWESRGFVSEWKQVFGSFDCASNKF 256

Query:    61 VNIQQDGMNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS 120
             + IQQ+G  KKYVGVPGMNSI KALC++ GV+S FG G+ + EWLE++  W ++   G++
Sbjct:   257 LGIQQEGDAKKYVGVPGMNSISKALCNESGVKSMFGTGIAKMEWLEEEIPWLLTDSKGEN 316

Query:   121 LGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPL 180
             LG+F+GVVASDKN+VSPRF  VTG PPPLDL+  P+LA KL+ IPV PCF+LMLAF EPL
Sbjct:   317 LGRFDGVVASDKNIVSPRFTQVTGLPPPLDLSLVPELATKLQNIPVLPCFSLMLAFKEPL 376

Query:   181 SSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEAT 240
             SSIPVKG SF++SE+LSWAHC+S+KPGRS +SERW+LHST DYA +VIA+TGLQK S  T
Sbjct:   377 SSIPVKGLSFKNSEILSWAHCESTKPGRSTDSERWILHSTPDYANSVIAKTGLQKLSSET 436

Query:   241 LKKVAEEMFQEFQGTGLSIPLPIFRKAHRW 270
             L K++EEMF+EFQ +GL   LP F KAHRW
Sbjct:   437 LNKISEEMFKEFQCSGLVSSLPFFMKAHRW 466


>TAIR|locus:2084903 [details] [associations]
            symbol:AT3G04650 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0009507 "chloroplast"
            evidence=IDA] GO:GO:0009507 EMBL:CP002686 GenomeReviews:BA000014_GR
            EMBL:AC011437 eggNOG:COG3380 EMBL:AY050342 EMBL:BT004515
            IPI:IPI00525811 RefSeq:NP_566235.1 UniGene:At.26589
            ProteinModelPortal:Q9SR09 SMR:Q9SR09 PaxDb:Q9SR09 PRIDE:Q9SR09
            EnsemblPlants:AT3G04650.1 GeneID:819623 KEGG:ath:AT3G04650
            TAIR:At3g04650 HOGENOM:HOG000244162 InParanoid:Q9SR09 OMA:QARIASW
            PhylomeDB:Q9SR09 ProtClustDB:CLSN2688068 Genevestigator:Q9SR09
            Uniprot:Q9SR09
        Length = 486

 Score = 299 (110.3 bits), Expect = 3.7e-26, P = 3.7e-26
 Identities = 92/320 (28%), Positives = 153/320 (47%)

Query:    14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYV 73
             ++FDH A FFT  ++  + LV  W   GLV EWK  +G  + +   F          +Y+
Sbjct:   142 LIFDHAAQFFTADDSRFIKLVDGWLEKGLVREWKGAVGELE-IGGSFSQFPSSSP-PRYI 199

Query:    74 GVPGMNSICKALCHQPGVESKFGVGVGRFEW---LEDKN-LWSVSGLDGQSLGQFNGVVA 129
                GM S+  +L     +ES+  V + R  W   LE  N +W +S  +G   GQF+ +V 
Sbjct:   200 AANGMRSLADSLL----LESQM-VNLVRPCWISKLEPLNGMWHLSE-NGTPRGQFDVIVI 253

Query:   130 SDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS 189
             +     + R    +G P          +A +++++ ++  +AL+ AF +PL ++  +G  
Sbjct:   254 AHNGKCANRLLSASGLPL---------VAKQMKKLDLSSIWALLAAFDDPLPTVNFEGAF 304

Query:   190 FQDSEVLSWAHCDSSKPGRSANSER-WVLHSTADYAR-TVIAQTGLQKPSEATLKKVAEE 247
              +  E LSW   +S+K G        W   STA Y +   + Q  +  P+  T +KV   
Sbjct:   305 VKGVESLSWMGNNSAKLGNGRTPPHCWTFFSTAAYGKQNKVPQENI--PT-VTAEKVKAG 361

Query:   248 MFQEFQ-GTGL---SIPLPIFRKAHRWGSAFPAASIAKEERCLWDVKRRLAICGDFCVSP 303
             M Q  +   GL   S+P P++ +   WG+A P  + A    C++D + R  ICGD+ +  
Sbjct:   362 MLQGVEIALGLPEGSLPKPVYTRLQLWGAALPKNTPAVP--CIFDPQGRAGICGDWLLGS 419

Query:   304 NVEGAILSGLDAASKLTEIL 323
             N+E A +SG    + + E L
Sbjct:   420 NLESAAISGAALGNHIAEFL 439


>UNIPROTKB|Q48MT7 [details] [associations]
            symbol:PSPPH_1014 "Uncharacterized protein" species:264730
            "Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491 EMBL:CP000058
            GenomeReviews:CP000058_GR eggNOG:COG3380 KO:K06955 OMA:QARIASW
            RefSeq:YP_273285.1 ProteinModelPortal:Q48MT7 SMR:Q48MT7
            STRING:Q48MT7 GeneID:3560140 KEGG:psp:PSPPH_1014 PATRIC:19971120
            HOGENOM:HOG000225370 ProtClustDB:CLSK868815 Uniprot:Q48MT7
        Length = 328

 Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
 Identities = 65/174 (37%), Positives = 96/174 (55%)

Query:   151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSA 210
             L  AP LA  +  + ++P +A+ LAF  PL + P++G   QDS  L W   + SKPGR  
Sbjct:   167 LAAAPKLASVVAGVKMDPTWAVALAFETPLQT-PMQGCFVQDSP-LDWLARNRSKPGRDD 224

Query:   211 NSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEF-QGTGLSIPLPIFRKAHR 269
               + WVLH+T+ ++R  +         +A+ ++V E +   F +    ++P P+F  AHR
Sbjct:   225 TLDSWVLHATSQWSRQNL---------DASREQVIEHLHGAFAELIDCAMPAPVFSLAHR 275

Query:   270 WGSAFPAASIAKEERCLWDVKRRLAICGDFCVSPNVEGAILSGLDAASKLTEIL 323
             W  A PA S   E   L D    + +CGD+C+S  VEGA LSG +AA +L E L
Sbjct:   276 WLYARPAGS--HEWGALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHL 327


>UNIPROTKB|Q4K6B1 [details] [associations]
            symbol:PFL_5143 "FAD dependent oxidoreductase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR002937 Pfam:PF01593 GO:GO:0016491 EMBL:CP000076
            GenomeReviews:CP000076_GR eggNOG:COG3380 KO:K06955 OMA:QARIASW
            HOGENOM:HOG000225370 ProtClustDB:CLSK868815 RefSeq:YP_262222.1
            ProteinModelPortal:Q4K6B1 SMR:Q4K6B1 STRING:Q4K6B1 GeneID:3479547
            KEGG:pfl:PFL_5143 PATRIC:19879749
            BioCyc:PFLU220664:GIX8-5184-MONOMER Uniprot:Q4K6B1
        Length = 328

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 71/174 (40%), Positives = 95/174 (54%)

Query:   151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSA 210
             L  AP LA     + ++P +A+ LAF  PL + P++G   QDS  L W   + SKPGR +
Sbjct:   167 LAAAPKLAGVAAGVKMDPTWAVALAFDTPLET-PMEGCFVQDSP-LDWLARNRSKPGRDS 224

Query:   211 NSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSI-PLPIFRKAHR 269
             + + WVLH+T+ ++R  I    L K  EA    V E++   F     S+ P P F  AHR
Sbjct:   225 HLDTWVLHATSAWSRQHI---DLSK--EA----VTEQLHGAFAELLHSVMPAPTFSLAHR 275

Query:   270 WGSAFPAASIAKEERCLWDVKRRLAICGDFCVSPNVEGAILSGLDAASKLTEIL 323
             W  A PA S   E   L D    L +CGD+C+S  VEGA LSG +AA +L E L
Sbjct:   276 WLYARPATS--HEWGALADADLGLYVCGDWCLSGRVEGAWLSGQEAARRLHESL 327


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.414    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      326       326   0.00087  116 3  11 22  0.40    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  249 KB (2133 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  25.06u 0.10s 25.16t   Elapsed:  00:00:01
  Total cpu time:  25.06u 0.10s 25.16t   Elapsed:  00:00:01
  Start:  Thu May  9 16:26:11 2013   End:  Thu May  9 16:26:12 2013

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