Query 020469
Match_columns 326
No_of_seqs 207 out of 1223
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 03:26:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020469.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020469hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qj4_A Renalase; FAD/NAD(P)-bi 100.0 1.2E-43 4.3E-48 327.3 23.9 293 1-323 43-342 (342)
2 1yvv_A Amine oxidase, flavin-c 100.0 7E-33 2.4E-37 254.0 29.3 280 14-325 49-329 (336)
3 3nks_A Protoporphyrinogen oxid 99.9 1.1E-24 3.8E-29 209.0 15.5 233 70-322 225-473 (477)
4 3i6d_A Protoporphyrinogen oxid 99.9 9.6E-24 3.3E-28 201.6 13.6 230 70-323 226-468 (470)
5 3lov_A Protoporphyrinogen oxid 99.9 3.4E-23 1.2E-27 198.7 12.8 230 69-325 226-467 (475)
6 2ivd_A PPO, PPOX, protoporphyr 99.9 1.5E-22 5.2E-27 194.2 12.8 234 69-324 228-474 (478)
7 2yg5_A Putrescine oxidase; oxi 99.8 1.7E-20 5.8E-25 178.7 15.3 230 71-324 207-452 (453)
8 1s3e_A Amine oxidase [flavin-c 99.8 2.8E-19 9.5E-24 173.5 19.4 232 70-324 206-455 (520)
9 1sez_A Protoporphyrinogen oxid 99.8 7.6E-20 2.6E-24 176.6 10.5 236 70-325 234-495 (504)
10 3ka7_A Oxidoreductase; structu 99.8 1.1E-18 3.8E-23 164.6 18.0 225 72-320 189-424 (425)
11 2jae_A L-amino acid oxidase; o 99.8 1.8E-18 6E-23 166.5 15.3 232 69-324 229-486 (489)
12 1b37_A Protein (polyamine oxid 99.8 7.7E-18 2.6E-22 161.4 19.1 227 75-324 202-459 (472)
13 2vvm_A Monoamine oxidase N; FA 99.8 2E-18 7E-23 166.3 11.9 224 71-324 247-486 (495)
14 3kkj_A Amine oxidase, flavin-c 99.8 1.5E-15 5.3E-20 132.3 28.6 280 14-325 49-329 (336)
15 3nrn_A Uncharacterized protein 99.8 1.4E-17 4.8E-22 157.1 16.5 213 71-319 181-403 (421)
16 2z3y_A Lysine-specific histone 99.7 3.7E-17 1.3E-21 163.0 19.2 229 69-324 391-659 (662)
17 2xag_A Lysine-specific histone 99.7 5.7E-17 2E-21 164.5 19.4 228 69-324 562-830 (852)
18 2iid_A L-amino-acid oxidase; f 99.7 2E-16 6.8E-21 152.4 16.5 229 70-324 232-485 (498)
19 4gut_A Lysine-specific histone 99.7 2.6E-16 8.9E-21 158.6 17.2 229 69-321 524-775 (776)
20 4dsg_A UDP-galactopyranose mut 99.7 5E-17 1.7E-21 156.3 8.9 225 73-320 210-452 (484)
21 1rsg_A FMS1 protein; FAD bindi 99.5 3.2E-13 1.1E-17 130.7 18.3 228 78-324 201-508 (516)
22 3k7m_X 6-hydroxy-L-nicotine ox 99.5 8.7E-13 3E-17 124.4 17.3 211 74-321 202-424 (431)
23 4gde_A UDP-galactopyranose mut 99.5 5E-14 1.7E-18 135.8 8.5 221 72-321 215-477 (513)
24 4dgk_A Phytoene dehydrogenase; 99.4 9.2E-13 3.1E-17 126.7 13.5 236 71-324 213-492 (501)
25 2b9w_A Putative aminooxidase; 99.3 1E-12 3.5E-17 123.8 7.4 216 71-320 198-423 (424)
26 3ayj_A Pro-enzyme of L-phenyla 99.2 3.9E-11 1.3E-15 119.1 11.6 240 70-324 338-680 (721)
27 2bi7_A UDP-galactopyranose mut 98.5 2E-07 7E-12 86.6 8.1 67 73-177 193-260 (384)
28 1v0j_A UDP-galactopyranose mut 98.5 4.6E-08 1.6E-12 91.4 3.6 75 73-179 199-273 (399)
29 1i8t_A UDP-galactopyranose mut 98.4 1.1E-06 3.8E-11 81.1 9.3 71 73-179 189-259 (367)
30 2e1m_C L-glutamate oxidase; L- 98.4 4.2E-07 1.5E-11 75.3 5.6 132 184-324 8-153 (181)
31 2bcg_G Secretory pathway GDP d 97.9 4.1E-05 1.4E-09 72.4 10.5 56 73-130 236-295 (453)
32 1d5t_A Guanine nucleotide diss 97.7 0.00021 7.3E-09 67.1 10.6 58 70-130 225-285 (433)
33 1ryi_A Glycine oxidase; flavop 96.3 0.027 9.2E-07 51.2 11.2 182 89-321 177-361 (382)
34 1vg0_A RAB proteins geranylger 96.0 0.78 2.7E-05 45.0 20.2 60 70-130 369-432 (650)
35 3ihg_A RDME; flavoenzyme, anth 95.9 0.088 3E-06 50.4 12.9 40 89-131 133-179 (535)
36 2qa2_A CABE, polyketide oxygen 95.4 0.38 1.3E-05 45.6 15.2 43 86-131 117-162 (499)
37 2qa1_A PGAE, polyketide oxygen 95.3 0.4 1.4E-05 45.5 14.8 43 86-131 116-161 (500)
38 3p1w_A Rabgdi protein; GDI RAB 95.2 0.026 9E-07 53.4 6.1 62 69-131 246-310 (475)
39 3rp8_A Flavoprotein monooxygen 95.1 0.14 4.6E-06 47.1 10.7 38 91-131 140-177 (407)
40 3hdq_A UDP-galactopyranose mut 95.1 0.033 1.1E-06 51.5 6.3 71 73-179 217-287 (397)
41 2e1m_B L-glutamate oxidase; L- 94.7 0.016 5.6E-07 44.6 2.8 52 123-182 7-58 (130)
42 2e1m_A L-glutamate oxidase; L- 94.5 0.031 1.1E-06 51.3 4.4 60 68-130 309-368 (376)
43 3fmw_A Oxygenase; mithramycin, 94.2 0.29 9.9E-06 47.4 11.1 40 89-131 161-203 (570)
44 3nix_A Flavoprotein/dehydrogen 94.0 0.29 1E-05 44.8 10.1 34 290-323 287-326 (421)
45 3i3l_A Alkylhalidase CMLS; fla 93.8 0.47 1.6E-05 46.1 11.6 42 88-131 140-184 (591)
46 3e1t_A Halogenase; flavoprotei 93.4 0.5 1.7E-05 44.9 10.9 34 290-323 295-334 (512)
47 2dkh_A 3-hydroxybenzoate hydro 93.1 3.6 0.00012 40.1 16.8 34 290-323 341-380 (639)
48 3cgv_A Geranylgeranyl reductas 92.9 0.86 2.9E-05 41.1 11.3 34 290-323 276-315 (397)
49 3pvc_A TRNA 5-methylaminomethy 91.3 0.24 8.1E-06 49.1 5.8 50 79-131 412-465 (689)
50 3nyc_A D-arginine dehydrogenas 91.2 0.14 4.6E-06 46.3 3.7 39 89-131 167-205 (381)
51 3ps9_A TRNA 5-methylaminomethy 90.8 0.21 7.1E-06 49.4 4.8 49 80-131 418-469 (676)
52 3dje_A Fructosyl amine: oxygen 90.5 0.22 7.4E-06 46.1 4.4 40 89-131 174-217 (438)
53 3dme_A Conserved exported prot 90.4 0.32 1.1E-05 43.4 5.4 40 89-131 163-205 (369)
54 3gwf_A Cyclohexanone monooxyge 90.0 0.21 7.1E-06 48.0 3.9 59 72-131 83-143 (540)
55 2xdo_A TETX2 protein; tetracyc 89.4 0.52 1.8E-05 43.0 6.1 50 79-131 128-178 (398)
56 2ywl_A Thioredoxin reductase r 89.3 0.37 1.3E-05 38.5 4.4 40 87-131 67-106 (180)
57 4ap3_A Steroid monooxygenase; 89.1 0.36 1.2E-05 46.5 4.8 53 78-131 101-155 (549)
58 4a9w_A Monooxygenase; baeyer-v 89.1 0.3 1E-05 43.3 4.0 50 78-131 78-128 (357)
59 2vou_A 2,6-dihydroxypyridine h 88.8 0.91 3.1E-05 41.3 7.2 50 79-131 99-149 (397)
60 2uzz_A N-methyl-L-tryptophan o 88.7 0.52 1.8E-05 42.3 5.4 39 89-131 162-200 (372)
61 2x3n_A Probable FAD-dependent 88.5 0.54 1.8E-05 42.8 5.4 39 90-131 122-162 (399)
62 4hb9_A Similarities with proba 88.4 0.71 2.4E-05 41.8 6.2 51 79-131 112-162 (412)
63 3v76_A Flavoprotein; structura 88.1 0.46 1.6E-05 44.0 4.7 59 75-137 128-189 (417)
64 3fpz_A Thiazole biosynthetic e 87.7 0.19 6.4E-06 44.7 1.7 37 288-324 281-325 (326)
65 2gv8_A Monooxygenase; FMO, FAD 87.2 0.41 1.4E-05 44.5 3.8 47 82-131 121-173 (447)
66 3d1c_A Flavin-containing putat 87.2 0.69 2.3E-05 41.4 5.2 45 83-131 95-139 (369)
67 1y56_B Sarcosine oxidase; dehy 86.9 0.69 2.4E-05 41.7 5.1 39 89-131 162-201 (382)
68 3uox_A Otemo; baeyer-villiger 86.7 0.36 1.2E-05 46.5 3.1 53 78-131 89-143 (545)
69 1w4x_A Phenylacetone monooxyge 86.2 0.64 2.2E-05 44.5 4.7 51 80-131 98-150 (542)
70 2oln_A NIKD protein; flavoprot 86.1 0.65 2.2E-05 42.2 4.5 48 79-131 157-204 (397)
71 2i0z_A NAD(FAD)-utilizing dehy 85.9 0.68 2.3E-05 43.1 4.6 54 79-135 134-191 (447)
72 2gf3_A MSOX, monomeric sarcosi 85.9 0.77 2.7E-05 41.3 4.8 39 89-131 163-201 (389)
73 1pn0_A Phenol 2-monooxygenase; 85.6 16 0.00056 35.7 14.6 34 290-323 350-389 (665)
74 1xdi_A RV3303C-LPDA; reductase 85.3 0.93 3.2E-05 42.8 5.3 46 83-131 230-275 (499)
75 2v3a_A Rubredoxin reductase; a 84.6 0.99 3.4E-05 40.9 5.0 45 84-131 195-239 (384)
76 3lxd_A FAD-dependent pyridine 84.4 1.3 4.6E-05 40.5 5.8 50 79-131 197-247 (415)
77 2gqf_A Hypothetical protein HI 84.2 1.3 4.4E-05 40.6 5.6 57 77-137 107-170 (401)
78 3lzw_A Ferredoxin--NADP reduct 83.8 1.3 4.5E-05 38.7 5.3 42 86-131 77-119 (332)
79 3ef6_A Toluene 1,2-dioxygenase 83.8 0.95 3.2E-05 41.6 4.5 47 82-131 191-237 (410)
80 3iwa_A FAD-dependent pyridine 83.1 1.2 4.1E-05 41.7 4.9 47 82-131 208-254 (472)
81 3o0h_A Glutathione reductase; 82.7 1.1 3.9E-05 42.0 4.6 41 88-131 244-284 (484)
82 1m6i_A Programmed cell death p 81.7 1.6 5.4E-05 41.2 5.2 48 81-131 231-278 (493)
83 3s5w_A L-ornithine 5-monooxyge 81.6 1.2 4E-05 41.5 4.2 54 78-132 129-189 (463)
84 2gag_B Heterotetrameric sarcos 81.4 1.9 6.6E-05 38.9 5.5 39 89-131 187-226 (405)
85 3nlc_A Uncharacterized protein 81.2 1.7 5.8E-05 41.8 5.2 36 289-324 507-543 (549)
86 2zbw_A Thioredoxin reductase; 81.1 1.3 4.4E-05 38.9 4.2 41 88-131 77-117 (335)
87 1fl2_A Alkyl hydroperoxide red 80.1 2.1 7E-05 37.1 5.1 47 84-131 64-111 (310)
88 3fg2_P Putative rubredoxin red 79.9 1.8 6E-05 39.6 4.7 46 83-131 191-237 (404)
89 3oc4_A Oxidoreductase, pyridin 79.6 2.6 8.9E-05 39.1 5.9 49 80-132 193-241 (452)
90 2yqu_A 2-oxoglutarate dehydrog 79.3 1.3 4.5E-05 41.1 3.7 40 89-131 221-260 (455)
91 3ab1_A Ferredoxin--NADP reduct 78.9 2.8 9.7E-05 37.2 5.7 41 88-131 86-127 (360)
92 3f8d_A Thioredoxin reductase ( 78.0 2.6 8.9E-05 36.5 5.1 42 86-131 80-121 (323)
93 1mo9_A ORF3; nucleotide bindin 77.9 1.9 6.6E-05 41.0 4.5 42 87-131 266-312 (523)
94 2xve_A Flavin-containing monoo 77.9 1.5 5.3E-05 40.9 3.7 35 288-322 305-339 (464)
95 1k0i_A P-hydroxybenzoate hydro 77.5 2.8 9.6E-05 37.8 5.3 49 80-131 108-159 (394)
96 2r9z_A Glutathione amide reduc 77.2 2.1 7.2E-05 39.9 4.5 42 87-131 218-260 (463)
97 2wpf_A Trypanothione reductase 76.8 2.9 9.8E-05 39.4 5.3 42 87-131 246-288 (495)
98 3s5w_A L-ornithine 5-monooxyge 76.8 2.8 9.5E-05 38.8 5.2 41 89-131 329-373 (463)
99 1fec_A Trypanothione reductase 76.7 2.5 8.7E-05 39.7 4.9 42 87-131 242-284 (490)
100 1ges_A Glutathione reductase; 76.2 2.5 8.5E-05 39.3 4.6 41 88-131 220-261 (450)
101 4dna_A Probable glutathione re 75.2 3.3 0.00011 38.5 5.2 43 85-131 220-264 (463)
102 4gcm_A TRXR, thioredoxin reduc 74.6 2.5 8.6E-05 36.7 4.0 40 286-325 266-307 (312)
103 3fbs_A Oxidoreductase; structu 73.8 3.4 0.00012 35.3 4.6 37 288-324 255-292 (297)
104 3klj_A NAD(FAD)-dependent dehy 73.8 2.6 8.9E-05 38.3 4.0 38 89-131 75-112 (385)
105 2q0l_A TRXR, thioredoxin reduc 73.7 3.4 0.00012 35.7 4.6 39 288-326 271-311 (311)
106 3c4n_A Uncharacterized protein 73.4 1.9 6.4E-05 39.4 3.0 39 89-131 185-232 (405)
107 2eq6_A Pyruvate dehydrogenase 72.9 3.4 0.00012 38.4 4.7 43 86-131 220-267 (464)
108 1onf_A GR, grase, glutathione 72.6 4.1 0.00014 38.3 5.2 43 86-131 227-271 (500)
109 2hqm_A GR, grase, glutathione 72.2 3.1 0.00011 39.0 4.2 41 88-131 238-281 (479)
110 1zmd_A Dihydrolipoyl dehydroge 71.9 5 0.00017 37.4 5.6 44 85-131 229-278 (474)
111 3f8d_A Thioredoxin reductase ( 71.7 5.8 0.0002 34.2 5.7 51 79-131 193-247 (323)
112 2q0l_A TRXR, thioredoxin reduc 71.4 5.1 0.00017 34.6 5.2 42 86-131 69-110 (311)
113 2qae_A Lipoamide, dihydrolipoy 70.7 4.3 0.00015 37.7 4.8 42 87-131 227-272 (468)
114 3oz2_A Digeranylgeranylglycero 70.3 3.6 0.00012 36.6 4.1 34 290-323 276-315 (397)
115 2cul_A Glucose-inhibited divis 70.0 5.7 0.0002 33.0 5.0 35 289-323 197-231 (232)
116 3fbs_A Oxidoreductase; structu 69.9 4.7 0.00016 34.3 4.6 38 90-131 71-108 (297)
117 1ojt_A Surface protein; redox- 68.9 3.4 0.00012 38.7 3.7 45 84-131 234-282 (482)
118 3itj_A Thioredoxin reductase 1 68.8 5.8 0.0002 34.5 5.1 38 288-325 297-336 (338)
119 2qcu_A Aerobic glycerol-3-phos 68.3 5.3 0.00018 37.6 5.0 40 89-131 162-206 (501)
120 3r9u_A Thioredoxin reductase; 67.6 5.5 0.00019 34.2 4.6 38 288-325 274-313 (315)
121 3alj_A 2-methyl-3-hydroxypyrid 67.5 6.8 0.00023 35.1 5.4 44 81-131 113-156 (379)
122 3lad_A Dihydrolipoamide dehydr 67.5 5 0.00017 37.4 4.5 43 86-131 231-276 (476)
123 2cul_A Glucose-inhibited divis 67.5 4.7 0.00016 33.5 4.0 38 90-131 83-121 (232)
124 3itj_A Thioredoxin reductase 1 67.1 6.1 0.00021 34.3 4.8 42 86-131 94-138 (338)
125 3cty_A Thioredoxin reductase; 66.7 7.1 0.00024 33.8 5.2 38 288-325 278-317 (319)
126 1fl2_A Alkyl hydroperoxide red 66.5 6.6 0.00023 33.8 4.9 37 288-324 267-305 (310)
127 2weu_A Tryptophan 5-halogenase 65.8 9.1 0.00031 35.9 6.0 39 89-131 186-226 (511)
128 4b63_A L-ornithine N5 monooxyg 65.5 6.8 0.00023 36.9 5.1 54 78-131 147-210 (501)
129 1vdc_A NTR, NADPH dependent th 65.1 5 0.00017 35.0 3.9 37 288-324 285-323 (333)
130 1y56_A Hypothetical protein PH 64.9 7.7 0.00026 36.4 5.3 52 76-131 258-309 (493)
131 1hyu_A AHPF, alkyl hydroperoxi 64.9 7.1 0.00024 37.0 5.1 45 86-131 277-322 (521)
132 2bry_A NEDD9 interacting prote 64.7 7.5 0.00026 36.6 5.2 42 89-131 179-226 (497)
133 1q1r_A Putidaredoxin reductase 64.0 6.8 0.00023 36.0 4.7 45 86-131 201-246 (431)
134 3atr_A Conserved archaeal prot 63.9 7.9 0.00027 35.7 5.1 34 290-323 281-320 (453)
135 2a8x_A Dihydrolipoyl dehydroge 63.8 6 0.0002 36.7 4.3 42 87-131 223-267 (464)
136 1dxl_A Dihydrolipoamide dehydr 63.6 6.7 0.00023 36.4 4.6 43 86-131 228-275 (470)
137 2e4g_A Tryptophan halogenase; 62.9 8.8 0.0003 36.6 5.3 38 90-131 209-248 (550)
138 2cdu_A NADPH oxidase; flavoenz 62.6 6.5 0.00022 36.3 4.3 44 84-131 199-243 (452)
139 1trb_A Thioredoxin reductase; 62.0 7.6 0.00026 33.5 4.4 38 288-325 276-315 (320)
140 3axb_A Putative oxidoreductase 61.8 7.4 0.00025 35.7 4.5 30 291-321 388-417 (448)
141 3r9u_A Thioredoxin reductase; 61.5 8 0.00027 33.1 4.5 50 79-131 186-240 (315)
142 4a5l_A Thioredoxin reductase; 61.4 8.9 0.0003 33.0 4.7 39 287-325 273-313 (314)
143 2ywl_A Thioredoxin reductase r 61.4 9.4 0.00032 29.9 4.5 36 288-323 133-170 (180)
144 1pj5_A N,N-dimethylglycine oxi 61.1 6.5 0.00022 39.6 4.3 39 89-131 164-203 (830)
145 1y0p_A Fumarate reductase flav 60.8 12 0.00042 35.7 6.0 44 89-134 268-316 (571)
146 1qo8_A Flavocytochrome C3 fuma 60.6 9.7 0.00033 36.4 5.2 52 80-134 255-311 (566)
147 1zk7_A HGII, reductase, mercur 60.6 6.1 0.00021 36.7 3.7 41 87-131 227-267 (467)
148 1ebd_A E3BD, dihydrolipoamide 60.4 5.5 0.00019 36.8 3.4 42 87-131 222-266 (455)
149 3ntd_A FAD-dependent pyridine 60.0 7.7 0.00026 36.9 4.4 58 81-139 197-271 (565)
150 1trb_A Thioredoxin reductase; 59.1 9.4 0.00032 32.9 4.5 41 86-131 72-112 (320)
151 2aqj_A Tryptophan halogenase, 58.7 14 0.00048 34.9 5.9 39 89-131 178-218 (538)
152 2q7v_A Thioredoxin reductase; 58.6 16 0.00056 31.5 6.0 51 79-131 191-245 (325)
153 3vrd_B FCCB subunit, flavocyto 58.4 3.3 0.00011 37.5 1.4 39 89-130 215-253 (401)
154 3d1c_A Flavin-containing putat 58.4 7.5 0.00026 34.4 3.8 42 88-131 226-268 (369)
155 1vdc_A NTR, NADPH dependent th 58.0 9.6 0.00033 33.1 4.4 39 88-131 82-120 (333)
156 2gqw_A Ferredoxin reductase; f 57.9 8.8 0.0003 34.9 4.2 40 87-131 70-109 (408)
157 2q7v_A Thioredoxin reductase; 57.9 11 0.00037 32.7 4.7 37 288-324 274-312 (325)
158 3cgb_A Pyridine nucleotide-dis 57.8 12 0.00041 34.8 5.3 47 82-131 99-148 (480)
159 4g6h_A Rotenone-insensitive NA 57.7 7.2 0.00025 36.8 3.7 52 78-131 274-328 (502)
160 3urh_A Dihydrolipoyl dehydroge 57.6 7.9 0.00027 36.2 3.9 44 86-131 249-296 (491)
161 3lzw_A Ferredoxin--NADP reduct 57.1 10 0.00036 32.7 4.4 37 288-324 275-315 (332)
162 2pyx_A Tryptophan halogenase; 56.8 16 0.00055 34.4 6.0 39 89-131 189-229 (526)
163 3ic9_A Dihydrolipoamide dehydr 56.1 15 0.0005 34.4 5.5 38 91-131 229-270 (492)
164 3dgh_A TRXR-1, thioredoxin red 55.6 14 0.00046 34.5 5.2 44 87-131 238-285 (483)
165 1d4d_A Flavocytochrome C fumar 55.6 15 0.0005 35.2 5.5 45 89-135 268-317 (572)
166 2gqw_A Ferredoxin reductase; f 55.2 13 0.00044 33.8 4.8 44 81-131 192-235 (408)
167 1nhp_A NADH peroxidase; oxidor 54.7 13 0.00043 34.3 4.8 47 81-131 196-242 (447)
168 3h8l_A NADH oxidase; membrane 54.1 6.5 0.00022 35.7 2.6 40 84-130 226-265 (409)
169 2vdc_G Glutamate synthase [NAD 54.0 11 0.00039 34.9 4.3 37 288-324 407-444 (456)
170 2r0c_A REBC; flavin adenine di 54.0 14 0.00047 35.2 5.0 37 93-131 152-192 (549)
171 1rp0_A ARA6, thiazole biosynth 53.7 14 0.00047 31.7 4.6 34 292-325 235-276 (284)
172 1v59_A Dihydrolipoamide dehydr 53.7 11 0.00037 35.0 4.2 46 85-131 233-283 (478)
173 4a9w_A Monooxygenase; baeyer-v 53.5 10 0.00034 33.1 3.8 39 286-324 310-352 (357)
174 2gqf_A Hypothetical protein HI 53.2 6.6 0.00022 35.8 2.5 33 289-321 362-400 (401)
175 2a87_A TRXR, TR, thioredoxin r 52.9 14 0.00047 32.2 4.6 37 288-324 278-316 (335)
176 2bc0_A NADH oxidase; flavoprot 52.5 17 0.00058 33.9 5.3 46 82-131 242-287 (490)
177 3ef6_A Toluene 1,2-dioxygenase 52.4 10 0.00034 34.6 3.6 38 89-131 70-107 (410)
178 3ics_A Coenzyme A-disulfide re 52.3 11 0.00039 36.0 4.1 49 84-137 236-284 (588)
179 1xhc_A NADH oxidase /nitrite r 51.9 7.6 0.00026 34.9 2.7 34 288-321 258-296 (367)
180 2a87_A TRXR, TR, thioredoxin r 51.6 15 0.00052 32.0 4.6 40 87-131 82-122 (335)
181 3c96_A Flavin-containing monoo 51.6 9.1 0.00031 34.7 3.2 32 290-321 302-339 (410)
182 4b1b_A TRXR, thioredoxin reduc 51.5 13 0.00045 35.5 4.4 41 88-131 275-315 (542)
183 4fk1_A Putative thioredoxin re 51.4 7.6 0.00026 33.5 2.6 39 286-324 260-300 (304)
184 3l8k_A Dihydrolipoyl dehydroge 49.4 9.3 0.00032 35.4 2.9 50 79-131 214-268 (466)
185 2zbw_A Thioredoxin reductase; 49.1 20 0.00069 31.0 5.0 43 87-131 202-248 (335)
186 1q1r_A Putidaredoxin reductase 48.4 13 0.00043 34.2 3.6 39 88-131 72-110 (431)
187 3dk9_A Grase, GR, glutathione 48.4 24 0.00083 32.6 5.7 43 86-131 238-289 (478)
188 4at0_A 3-ketosteroid-delta4-5a 48.2 18 0.00063 33.9 4.8 54 80-135 203-264 (510)
189 3nlc_A Uncharacterized protein 48.1 41 0.0014 32.1 7.2 40 89-131 233-273 (549)
190 3ics_A Coenzyme A-disulfide re 47.9 18 0.00062 34.5 4.8 48 82-131 99-148 (588)
191 3ntd_A FAD-dependent pyridine 47.2 12 0.00041 35.6 3.4 46 84-131 66-113 (565)
192 3cgb_A Pyridine nucleotide-dis 47.0 19 0.00065 33.4 4.7 42 86-131 237-278 (480)
193 3cty_A Thioredoxin reductase; 46.9 18 0.0006 31.2 4.2 40 87-131 83-122 (319)
194 3lxd_A FAD-dependent pyridine 46.8 12 0.00043 33.9 3.3 39 88-131 77-115 (415)
195 3iwa_A FAD-dependent pyridine 46.2 19 0.00063 33.4 4.5 47 82-131 72-121 (472)
196 2rgh_A Alpha-glycerophosphate 46.1 17 0.00059 34.8 4.3 42 88-131 200-246 (571)
197 2bc0_A NADH oxidase; flavoprot 45.8 11 0.00039 35.1 2.9 41 88-131 104-145 (490)
198 3da1_A Glycerol-3-phosphate de 45.8 14 0.00048 35.3 3.6 41 89-131 183-228 (561)
199 1m6i_A Programmed cell death p 45.6 11 0.00036 35.4 2.7 38 89-131 103-140 (493)
200 2zxi_A TRNA uridine 5-carboxym 45.3 23 0.00079 34.5 5.0 32 290-321 389-420 (637)
201 1rp0_A ARA6, thiazole biosynth 45.2 12 0.00042 32.0 2.9 24 81-104 125-148 (284)
202 3hyw_A Sulfide-quinone reducta 45.1 16 0.00053 33.5 3.7 37 288-324 284-333 (430)
203 3kd9_A Coenzyme A disulfide re 44.6 9.5 0.00033 35.1 2.2 43 85-131 68-110 (449)
204 3v76_A Flavoprotein; structura 44.3 8.8 0.0003 35.2 1.9 30 289-318 381-416 (417)
205 3ab1_A Ferredoxin--NADP reduct 44.3 33 0.0011 30.1 5.7 41 89-131 215-259 (360)
206 1hyu_A AHPF, alkyl hydroperoxi 44.1 23 0.00077 33.4 4.8 36 289-324 479-516 (521)
207 3h28_A Sulfide-quinone reducta 42.4 23 0.00077 32.3 4.4 46 80-130 204-251 (430)
208 2gmh_A Electron transfer flavo 40.2 36 0.0012 32.6 5.5 34 290-323 346-385 (584)
209 3dgz_A Thioredoxin reductase 2 40.0 29 0.00099 32.2 4.8 45 86-131 235-283 (488)
210 1lvl_A Dihydrolipoamide dehydr 39.3 23 0.00079 32.7 3.9 39 88-131 224-264 (458)
211 3hyw_A Sulfide-quinone reducta 39.3 12 0.0004 34.4 1.9 48 79-130 203-251 (430)
212 3ces_A MNMG, tRNA uridine 5-ca 37.6 31 0.0011 33.7 4.6 34 289-322 383-416 (651)
213 3atr_A Conserved archaeal prot 37.3 30 0.001 31.8 4.3 40 89-131 113-158 (453)
214 4fk1_A Putative thioredoxin re 36.6 51 0.0017 28.1 5.5 37 93-131 77-113 (304)
215 1nhp_A NADH peroxidase; oxidor 36.2 34 0.0012 31.2 4.6 41 89-131 69-111 (447)
216 3cp8_A TRNA uridine 5-carboxym 35.6 30 0.001 33.7 4.2 34 289-322 377-410 (641)
217 2gmh_A Electron transfer flavo 35.2 34 0.0012 32.8 4.5 40 89-131 157-213 (584)
218 2gjc_A Thiazole biosynthetic e 33.8 39 0.0013 29.9 4.3 36 289-324 282-325 (326)
219 2e5v_A L-aspartate oxidase; ar 33.7 22 0.00076 33.0 2.8 48 79-132 123-173 (472)
220 3kd9_A Coenzyme A disulfide re 33.3 43 0.0015 30.6 4.7 41 86-131 200-240 (449)
221 3k30_A Histamine dehydrogenase 32.7 26 0.00088 34.3 3.2 43 84-131 575-620 (690)
222 4eqs_A Coenzyme A disulfide re 32.4 46 0.0016 30.4 4.8 47 78-131 190-236 (437)
223 2i0z_A NAD(FAD)-utilizing dehy 31.7 28 0.00095 32.0 3.1 35 289-323 403-443 (447)
224 3h28_A Sulfide-quinone reducta 31.5 54 0.0018 29.7 5.1 36 289-324 285-333 (430)
225 3oc4_A Oxidoreductase, pyridin 30.7 30 0.001 31.7 3.2 40 89-131 71-111 (452)
226 1ps9_A 2,4-dienoyl-COA reducta 30.3 49 0.0017 32.2 4.8 47 79-131 576-624 (671)
227 4hb9_A Similarities with proba 29.9 28 0.00097 30.8 2.8 34 290-323 310-349 (412)
228 1y56_A Hypothetical protein PH 29.9 52 0.0018 30.6 4.7 35 289-323 342-376 (493)
229 3k30_A Histamine dehydrogenase 29.8 21 0.00071 35.0 2.0 34 290-323 641-674 (690)
230 3f7w_A Putative fructosamine-3 29.8 31 0.0011 29.3 2.9 37 77-119 1-40 (288)
231 3pl8_A Pyranose 2-oxidase; sub 29.7 20 0.0007 34.7 1.9 58 90-147 274-336 (623)
232 2cdu_A NADPH oxidase; flavoenz 29.7 34 0.0011 31.4 3.3 40 89-131 71-113 (452)
233 3sx6_A Sulfide-quinone reducta 29.7 54 0.0019 29.8 4.7 36 289-324 296-344 (437)
234 3sx6_A Sulfide-quinone reducta 29.1 45 0.0015 30.4 4.0 47 79-130 211-264 (437)
235 3jsk_A Cypbp37 protein; octame 28.7 40 0.0014 30.0 3.5 35 290-324 293-335 (344)
236 2wdq_A Succinate dehydrogenase 28.1 78 0.0027 30.3 5.7 50 81-133 149-204 (588)
237 3h8l_A NADH oxidase; membrane 27.9 56 0.0019 29.2 4.4 35 289-323 298-335 (409)
238 3vrd_B FCCB subunit, flavocyto 27.8 55 0.0019 29.2 4.3 36 288-323 284-323 (401)
239 3klj_A NAD(FAD)-dependent dehy 27.8 35 0.0012 30.6 3.0 35 287-321 254-293 (385)
240 2x3n_A Probable FAD-dependent 27.5 38 0.0013 30.2 3.2 34 290-323 285-324 (399)
241 2h88_A Succinate dehydrogenase 26.7 76 0.0026 30.7 5.3 52 80-133 156-215 (621)
242 1kdg_A CDH, cellobiose dehydro 26.6 28 0.00097 32.9 2.2 63 81-145 201-271 (546)
243 1xhc_A NADH oxidase /nitrite r 26.4 32 0.0011 30.6 2.5 42 82-131 189-230 (367)
244 3fg2_P Putative rubredoxin red 26.2 46 0.0016 29.9 3.5 37 89-131 70-106 (404)
245 1kf6_A Fumarate reductase flav 26.2 61 0.0021 31.1 4.6 42 89-132 147-194 (602)
246 2gag_A Heterotetrameric sarcos 26.0 57 0.0019 33.4 4.5 36 289-324 409-444 (965)
247 2xdo_A TETX2 protein; tetracyc 25.4 43 0.0015 29.9 3.2 30 292-321 315-350 (398)
248 3ic9_A Dihydrolipoamide dehydr 25.4 57 0.0019 30.3 4.1 35 287-321 302-337 (492)
249 3c96_A Flavin-containing monoo 25.1 45 0.0015 29.9 3.2 48 81-131 113-165 (410)
250 3l8k_A Dihydrolipoyl dehydroge 24.7 66 0.0023 29.5 4.4 35 288-322 298-333 (466)
251 2a8x_A Dihydrolipoyl dehydroge 24.2 62 0.0021 29.6 4.1 35 287-321 298-333 (464)
252 2v3a_A Rubredoxin reductase; a 23.6 38 0.0013 30.1 2.5 34 288-321 267-305 (384)
253 1dxl_A Dihydrolipoamide dehydr 23.5 77 0.0026 29.0 4.6 35 287-321 306-341 (470)
254 3cp8_A TRNA uridine 5-carboxym 23.4 56 0.0019 31.8 3.6 48 81-132 123-171 (641)
255 1chu_A Protein (L-aspartate ox 22.8 46 0.0016 31.5 2.9 36 288-323 365-410 (540)
256 3dgh_A TRXR-1, thioredoxin red 22.5 86 0.0029 28.8 4.7 35 287-321 315-351 (483)
257 3lad_A Dihydrolipoamide dehydr 22.5 78 0.0027 29.0 4.4 35 288-322 308-343 (476)
258 1n4w_A CHOD, cholesterol oxida 22.4 52 0.0018 30.7 3.2 53 90-144 236-297 (504)
259 3urh_A Dihydrolipoyl dehydroge 22.3 65 0.0022 29.8 3.8 36 287-322 327-363 (491)
260 3dk9_A Grase, GR, glutathione 22.1 75 0.0026 29.2 4.2 36 287-322 320-356 (478)
261 2qae_A Lipoamide, dihydrolipoy 22.0 64 0.0022 29.6 3.7 34 288-321 304-339 (468)
262 1v59_A Dihydrolipoamide dehydr 21.9 83 0.0028 28.9 4.4 35 287-321 314-349 (478)
263 1gte_A Dihydropyrimidine dehyd 21.7 73 0.0025 32.9 4.3 37 288-324 471-508 (1025)
264 3qvp_A Glucose oxidase; oxidor 21.6 65 0.0022 30.9 3.7 60 88-147 239-305 (583)
265 1cjc_A Protein (adrenodoxin re 21.2 40 0.0014 31.2 2.1 35 290-324 359-395 (460)
266 2bs2_A Quinol-fumarate reducta 20.9 94 0.0032 30.3 4.7 52 80-133 159-218 (660)
267 2hqm_A GR, grase, glutathione 20.8 88 0.003 28.8 4.4 35 287-321 311-346 (479)
268 3qfa_A Thioredoxin reductase 1 20.7 84 0.0029 29.4 4.3 35 287-321 343-379 (519)
269 2x8g_A Thioredoxin glutathione 20.6 85 0.0029 29.9 4.3 34 288-321 423-458 (598)
270 1ebd_A E3BD, dihydrolipoamide 20.4 86 0.003 28.5 4.2 34 288-321 298-332 (455)
271 1k0i_A P-hydroxybenzoate hydro 20.2 63 0.0021 28.6 3.1 33 290-322 278-316 (394)
272 1o94_A Tmadh, trimethylamine d 20.1 40 0.0014 33.3 1.9 34 290-323 666-699 (729)
No 1
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.2e-43 Score=327.26 Aligned_cols=293 Identities=20% Similarity=0.288 Sum_probs=238.6
Q ss_pred CcccccccCCCCceecccCCCceeeCCh---hHHHHHHHHHhCCccccccCceeeeeccCcceeecccCCCCceEEeCCC
Q 020469 1 MSQRRETSEDGNEMLFDHGAPFFTVTNN---DVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPG 77 (326)
Q Consensus 1 matrr~~~~~~~~~~~DhGAq~ft~~~~---~f~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~yv~~~G 77 (326)
|+|+|. ..+....+|||++||+.+++ .|.++++.|...|.+.+|........ ......+|+..+|
T Consensus 43 ~~~~~~--~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~~~~~~~~~g 110 (342)
T 3qj4_A 43 MTTACS--PHNPQCTADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPLSSPIEGMV----------MKEGDCNFVAPQG 110 (342)
T ss_dssp GCEEEC--SSCTTCEEESSCCCEEECSSHHHHTHHHHHHHHHTTSCEECCSCEETCC----------C--CCEEEECTTC
T ss_pred eeeeec--CCCCCceEecCCceEEcCchHHHHHHHHHHHHHhCCCeecCchhhccee----------ccCCccceecCCC
Confidence 355554 33344679999999999987 88899999999999999986533211 1234678999999
Q ss_pred chHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCCcChHH
Q 020469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDL 157 (326)
Q Consensus 78 m~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~~~~~~ 157 (326)
|++++++|++.++.+|+++++|++|++ ++++|.|.+++|+.+ .||.||+| +|+|++.+|+....| .+++..
T Consensus 111 ~~~l~~~l~~~~g~~i~~~~~V~~i~~--~~~~~~v~~~~g~~~-~ad~vV~A---~p~~~~~~ll~~~~~---~l~~~~ 181 (342)
T 3qj4_A 111 ISSIIKHYLKESGAEVYFRHRVTQINL--RDDKWEVSKQTGSPE-QFDLIVLT---MPVPEILQLQGDITT---LISECQ 181 (342)
T ss_dssp TTHHHHHHHHHHTCEEESSCCEEEEEE--CSSSEEEEESSSCCE-EESEEEEC---SCHHHHTTCBSTHHH---HSCHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEE--cCCEEEEEECCCCEE-EcCEEEEC---CCHHHHHHHhccccc---ccCHHH
Confidence 999999999977888999999999998 778899998888654 89999999 899999998752110 234467
Q ss_pred HHHhccCCCcceeeeeeecCCCCCC-CCCCceeecCCCceeeeeecCCCCCCC--CCCceEEEEeCHHHHHHhHhhcCCC
Q 020469 158 AVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSFQDSEVLSWAHCDSSKPGRS--ANSERWVLHSTADYARTVIAQTGLQ 234 (326)
Q Consensus 158 ~~~l~~~~~~~~~~v~l~~~~~~~~-~p~~g~~~~~~~~l~w~~~~sskpgr~--~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (326)
.+.++.++|.+|++|++.|+++++. .|++|+++++++++.|++++++||+|. +++.+|++++++.|++++++.
T Consensus 182 ~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k~~r~~~~~~~~~v~~~~~~~~~~~~~~---- 257 (342)
T 3qj4_A 182 RQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKKRNIESSEIGPSLVIHTTVPFGVTYLEH---- 257 (342)
T ss_dssp HHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHHTTCCCC-CCCEEEEEECHHHHHHTTTS----
T ss_pred HHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccCCCCCCCCCCceEEEECCHHHHHHhhcC----
Confidence 8889999999999999999987543 688999887766799999999999875 234589999999999998776
Q ss_pred CCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCCCeee-ccCCCeEEeeCCCCCCChhHHHHHHH
Q 020469 235 KPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEERCLW-DVKRRLAICGDFCVSPNVEGAILSGL 313 (326)
Q Consensus 235 ~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~~~~~-~~~~~l~~aGD~~~g~~vegA~~SG~ 313 (326)
+++++.+.++++|.++++..+.|.++.+|||+||+|++.......++. +..++|++||||+.|++||+|++||+
T Consensus 258 -----~~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~~~~~~~~~~~~~l~laGd~~~g~~v~~ai~sg~ 332 (342)
T 3qj4_A 258 -----SIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANCPGQMTLHHKPFLACGGDGFTQSNFDGCITSAL 332 (342)
T ss_dssp -----CHHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSSSCSCEEEETTTEEEECSGGGSCSSHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHHHhccCCCCCceeeeccccccccccccCCCcceeEecCCccEEEEccccCCCCccHHHHHHH
Confidence 578999999999998766677899999999999999986532233454 67789999999999999999999999
Q ss_pred HHHHHHHhhh
Q 020469 314 DAASKLTEIL 323 (326)
Q Consensus 314 ~aA~~l~~~l 323 (326)
++|++|+..|
T Consensus 333 ~aa~~i~~~l 342 (342)
T 3qj4_A 333 CVLEALKNYI 342 (342)
T ss_dssp HHHHHHTTC-
T ss_pred HHHHHHHhhC
Confidence 9999997654
No 2
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=100.00 E-value=7e-33 Score=253.97 Aligned_cols=280 Identities=31% Similarity=0.563 Sum_probs=232.0
Q ss_pred eecccCCCceeeCChhHHHHHHHHHhCCccccccCceeeeeccCcceeecccCCCCceEEeCCCchHHHHHHhcCCCCee
Q 020469 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVES 93 (326)
Q Consensus 14 ~~~DhGAq~ft~~~~~f~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~yv~~~Gm~~l~~~La~~l~~~i 93 (326)
..+|+|+++|+..++.+.++++.|...+.+..|...+..++.. .+.. ......+|+..+||..|.+.|+++ ++|
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~l~~~l~~g--~~i 122 (336)
T 1yvv_A 49 GALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAG--RLSP--SPDEQVRWVGKPGMSAITRAMRGD--MPV 122 (336)
T ss_dssp EEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSS--BCCC--CCTTSCEEEESSCTHHHHHHHHTT--CCE
T ss_pred CeEecCCCeEecCCHHHHHHHHHHHhCCCeeeccccceeccCc--cccc--CCCCCccEEcCccHHHHHHHHHcc--CcE
Confidence 4699999999999999999999999888999998776655422 2211 234567899999999999999984 469
Q ss_pred EcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCCcChHHHHHhccCCCcceeeee
Q 020469 94 KFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173 (326)
Q Consensus 94 ~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 173 (326)
+++++|++|+. ++++|.|++++|+....+|.||+| .|++++..++. ..|.+...+..+.|.+|++++
T Consensus 123 ~~~~~v~~i~~--~~~~~~v~~~~g~~~~~a~~vV~a---~g~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~ 189 (336)
T 1yvv_A 123 SFSCRITEVFR--GEEHWNLLDAEGQNHGPFSHVIIA---TPAPQASTLLA--------AAPKLASVVAGVKMDPTWAVA 189 (336)
T ss_dssp ECSCCEEEEEE--CSSCEEEEETTSCEEEEESEEEEC---SCHHHHGGGGT--------TCHHHHHHHTTCCEEEEEEEE
T ss_pred EecCEEEEEEE--eCCEEEEEeCCCcCccccCEEEEc---CCHHHHHHhhc--------cCHHHHHHHhhcCccceeEEE
Confidence 99999999998 678899998888754358999999 78888777763 246777888999999999999
Q ss_pred eecCCCCCCCCCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHH
Q 020469 174 LAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQ 253 (326)
Q Consensus 174 l~~~~~~~~~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 253 (326)
+.|+++.+ .+..++++. ++++.|+..++.+|++.+.+.+||++.+++|++++.+. +++++.+++.+.|.
T Consensus 190 ~~~~~~~~-~~~~~~~~~-~~~~~~l~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~~---------~~~~~~~~l~~~l~ 258 (336)
T 1yvv_A 190 LAFETPLQ-TPMQGCFVQ-DSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDA---------SREQVIEHLHGAFA 258 (336)
T ss_dssp EEESSCCS-CCCCEEEEC-SSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTS---------CHHHHHHHHHHHHH
T ss_pred EEecCCCC-CCCCeEEeC-CCceeEEEecCcCCCCCCCCcEEEEEeCHHHHHHHHhC---------CHHHHHHHHHHHHH
Confidence 99999876 577777765 46899999999999887533589999999999887665 56888899999998
Q ss_pred hcCC-CCCCcceeeeeecCCCCCCCCCCCCCCeeeccCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhhcc
Q 020469 254 GTGL-SIPLPIFRKAHRWGSAFPAASIAKEERCLWDVKRRLAICGDFCVSPNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 254 ~~~~-~~~~p~~~~~~rW~~A~p~~~~~~~~~~~~~~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
...+ ..+.|.+..++||+|++|++..+ ..++++..++|++||||+.|++||+|++||.++|+.|++.+.+
T Consensus 259 ~~lg~~~~~p~~~~~~rw~~a~~~~~~~--~~~~~~~~~rl~laGDa~~g~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 259 ELIDCTMPAPVFSLAHRWLYARPAGAHE--WGALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTCSSCCCCCSEEEEEEEEEEEESSCCC--CSCEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhCCCCCCCcEEEccccCccCCCCCCC--CCeeecCCCCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 7543 45568889999999999998765 3466677899999999999999999999999999999988754
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.92 E-value=1.1e-24 Score=208.95 Aligned_cols=233 Identities=18% Similarity=0.154 Sum_probs=176.8
Q ss_pred ceEEeCCCchHHHHHHhcCC---CCeeEcceeEeeEEeecCCCC-eEEEccCCCccccccEEEeccCCCCCcchhhhcCC
Q 020469 70 KKYVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGR 145 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l---~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~ 145 (326)
..|...+||+.|++.|++.+ |++|+++++|++|+. ++++ |.|.++++ .+ .||+||+| +|++++..++.
T Consensus 225 ~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~--~~~~~~~v~~~~~-~~-~ad~vv~a---~p~~~~~~ll~- 296 (477)
T 3nks_A 225 SQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSL--QAEGRWKVSLRDS-SL-EADHVISA---IPASVLSELLP- 296 (477)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEE--CGGGCEEEECSSC-EE-EESEEEEC---SCHHHHHHHSC-
T ss_pred cEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEE--cCCceEEEEECCe-EE-EcCEEEEC---CCHHHHHHhcc-
Confidence 46888999999999998876 678999999999987 5555 99977544 43 79999999 89998888864
Q ss_pred CCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceeecC---CCceeeeeecCCC-CCCC--CCCceEEEEe
Q 020469 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQD---SEVLSWAHCDSSK-PGRS--ANSERWVLHS 219 (326)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~~~---~~~l~w~~~~ssk-pgr~--~~~~~~~~~~ 219 (326)
...+.+.+.+..++|.+++++++.|+++.+..+..|++++. ..++.|+ +++++ |++. ++...++++.
T Consensus 297 ------~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~~-~~s~~~~~~~~~~~~~~l~~~~ 369 (477)
T 3nks_A 297 ------AEAAPLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGIV-YDSVAFPEQDGSPPGLRVTVML 369 (477)
T ss_dssp ------GGGHHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEEE-CHHHHCGGGSTTTTCEEEEEEE
T ss_pred ------ccCHHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEEE-EeccccCCCCCCCCceEEEEEE
Confidence 34577888899999999999999999987633334666653 3356765 45444 5543 2345677888
Q ss_pred CHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCC------CeeeccCCCe
Q 020469 220 TADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEE------RCLWDVKRRL 293 (326)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~------~~~~~~~~~l 293 (326)
+..|...+.+... +.+++++.+.+++++.++.+..+.|.+..++||++++|++..++.. ..+.....+|
T Consensus 370 gg~~~~~~~~~~~-----~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l 444 (477)
T 3nks_A 370 GGSWLQTLEASGC-----VLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPL 444 (477)
T ss_dssp CHHHHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSE
T ss_pred CCccccccccccC-----CCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 8888877653210 0145778888888888754334678999999999999999887521 1122335689
Q ss_pred EEeeCCCCCCChhHHHHHHHHHHHHHHhh
Q 020469 294 AICGDFCVSPNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 294 ~~aGD~~~g~~vegA~~SG~~aA~~l~~~ 322 (326)
++||||+.|.+||+|+.||+++|++|+..
T Consensus 445 ~l~G~~~~G~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 445 TLAGASYEGVAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp EECSTTTSCCSHHHHHHHHHHHHHHHHHC
T ss_pred EEEccCCCCCcHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999864
No 4
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.90 E-value=9.6e-24 Score=201.62 Aligned_cols=230 Identities=12% Similarity=0.142 Sum_probs=170.3
Q ss_pred ceEEeCCCchHHHHHHhcCCC-CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCC
Q 020469 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP 148 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~ 148 (326)
..+...+||++|++.|++.+. .+|+++++|++|+. ++++|.|.+.+|+.+ .||+||+| +|++++..++.-+
T Consensus 226 ~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~~~v~~~~g~~~-~ad~vi~a---~p~~~~~~l~~~~-- 297 (470)
T 3i6d_A 226 QFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSH--SGSCYSLELDNGVTL-DADSVIVT---APHKAAAGMLSEL-- 297 (470)
T ss_dssp -EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEE--CSSSEEEEESSSCEE-EESEEEEC---SCHHHHHHHTTTS--
T ss_pred eEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEE--cCCeEEEEECCCCEE-ECCEEEEC---CCHHHHHHHcCCc--
Confidence 456778999999999999886 57999999999998 677899999888654 79999999 8999888876411
Q ss_pred CCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCC--CCceeecCCCc--eeeeeecCCC-CCCCCC-CceEEEEeCHH
Q 020469 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP--VKGFSFQDSEV--LSWAHCDSSK-PGRSAN-SERWVLHSTAD 222 (326)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p--~~g~~~~~~~~--l~w~~~~ssk-pgr~~~-~~~~~~~~~~~ 222 (326)
.+.+.++.++|.++.++++.|++++|..+ ..|++++..+. +..+.+++.+ +.+.+. ...+++.....
T Consensus 298 -------~~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l~~~~~~~ 370 (470)
T 3i6d_A 298 -------PAISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLLRAYVGKA 370 (470)
T ss_dssp -------TTHHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEEEEEECCS
T ss_pred -------hhhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEEEEEECCC
Confidence 23567889999999999999999887533 34556654432 2222333322 222221 23445555544
Q ss_pred HHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCC------CeeeccCCCeEEe
Q 020469 223 YARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEE------RCLWDVKRRLAIC 296 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~------~~~~~~~~~l~~a 296 (326)
++..+.+. +++++.+.+++.+.++.+..+.|.+..++||+++.|.+..++.. +.+..+.++|++|
T Consensus 371 ~~~~~~~~---------~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~a 441 (470)
T 3i6d_A 371 GDESIVDL---------SDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQRIKELREALASAYPGVYMT 441 (470)
T ss_dssp SCCGGGTS---------CHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHHHHHHHHHHHHHSTTEEEC
T ss_pred CCccccCC---------CHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 44333332 46788899999999876555678999999999999988777421 1233456799999
Q ss_pred eCCCCCCChhHHHHHHHHHHHHHHhhh
Q 020469 297 GDFCVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 297 GD~~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
|||+.|.+||+|++||+++|++|++.|
T Consensus 442 G~~~~g~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 442 GASFEGVGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp STTTSCCSHHHHHHHHHHHHHHHHHHH
T ss_pred eecCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999876
No 5
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.89 E-value=3.4e-23 Score=198.66 Aligned_cols=230 Identities=10% Similarity=0.101 Sum_probs=166.4
Q ss_pred CceEEeCCCchHHHHHHhcCCC-CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCC
Q 020469 69 NKKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~ 147 (326)
...+...+||++|++.|++.+. .+|+++++|++|++ ++++|.|.+.+| .+ .||+||+| +|++.+..++..+
T Consensus 226 ~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~~~v~~~~g-~~-~ad~vV~a---~p~~~~~~ll~~~- 297 (475)
T 3lov_A 226 GQFLSLETGLESLIERLEEVLERSEIRLETPLLAISR--EDGRYRLKTDHG-PE-YADYVLLT---IPHPQVVQLLPDA- 297 (475)
T ss_dssp CSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEE--ETTEEEEECTTC-CE-EESEEEEC---SCHHHHHHHCTTS-
T ss_pred CcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEE--eCCEEEEEECCC-eE-ECCEEEEC---CCHHHHHHHcCcc-
Confidence 3457889999999999999886 68999999999997 667899999888 43 89999999 8999988886421
Q ss_pred CCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCC--ceeecCCCce--eeeeecCCC-CCCCCCCceEEEEeCHH
Q 020469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVK--GFSFQDSEVL--SWAHCDSSK-PGRSANSERWVLHSTAD 222 (326)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~--g~~~~~~~~l--~w~~~~ssk-pgr~~~~~~~~~~~~~~ 222 (326)
.+ +.++.++|.+++++++.|++++ ..+.. |++++..+.+ ..+.+++.+ |.+.+....+++.....
T Consensus 298 ----~~-----~~~~~~~~~~~~~v~l~~~~~~-~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~~~~~~~ 367 (475)
T 3lov_A 298 ----HL-----PELEQLTTHSTATVTMIFDQQQ-SLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLRAFVGRP 367 (475)
T ss_dssp ----CC-----HHHHTCCEEEEEEEEEEEECCS-SCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEEEEECBT
T ss_pred ----CH-----HHHhcCCCCeEEEEEEEECCcC-CCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEEEEeCCC
Confidence 11 5678899999999999999987 34444 4555543332 222333322 23222212333444444
Q ss_pred HHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCC------CeeeccCCCeEEe
Q 020469 223 YARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEE------RCLWDVKRRLAIC 296 (326)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~------~~~~~~~~~l~~a 296 (326)
++..+.+. +++++.+.+++++.++.+....|.+..++||+++.|++.+|+.. +.+..+.++|++|
T Consensus 368 ~~~~~~~~---------~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~a 438 (475)
T 3lov_A 368 GNDHLVHE---------SDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADRIQRVREEVLAQYPGIYLA 438 (475)
T ss_dssp TBCGGGGS---------CHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHHHHHHHHHHHHHSTTEEEC
T ss_pred CCCcccCC---------CHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHHHHHHHHHHHhhCCCEEEE
Confidence 33333332 46778888888888764444578999999999999988877411 1233456799999
Q ss_pred eCCCCCCChhHHHHHHHHHHHHHHhhhcc
Q 020469 297 GDFCVSPNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 297 GD~~~g~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
|||+.|.+||+|++||+++|++|+..++.
T Consensus 439 G~~~~g~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 439 GLAYDGVGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp STTTSCSSHHHHHHHHHHHHHHHHHTC--
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999987754
No 6
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.88 E-value=1.5e-22 Score=194.20 Aligned_cols=234 Identities=16% Similarity=0.157 Sum_probs=167.4
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEc---cCCCccccccEEEeccCCCCCcchhhhcCC
Q 020469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQSLGQFNGVVASDKNVVSPRFRDVTGR 145 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~---~~g~~~~~~d~VVla~~~~pap~~~~ll~~ 145 (326)
...|...+||++|+++|++.++.+|+++++|++|.. ++++|.|.+ .+|+.+ .||+||+| +|++++..++.
T Consensus 228 ~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~~~v~~~~~~~g~~~-~ad~vV~a---~~~~~~~~ll~- 300 (478)
T 2ivd_A 228 GALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAR--EDGGWRLIIEEHGRRAEL-SVAQVVLA---APAHATAKLLR- 300 (478)
T ss_dssp CCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEEC--C--CCEEEEEETTEEEEE-ECSEEEEC---SCHHHHHHHHT-
T ss_pred ccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEe--cCCeEEEEEeecCCCceE-EcCEEEEC---CCHHHHHHHhh-
Confidence 457888999999999999988778999999999987 666799987 566554 79999999 78888887763
Q ss_pred CCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCC-CCceeecC--CCceeeeeecCCC-CCCCC-CCceEEEEeC
Q 020469 146 PPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIP-VKGFSFQD--SEVLSWAHCDSSK-PGRSA-NSERWVLHST 220 (326)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p-~~g~~~~~--~~~l~w~~~~ssk-pgr~~-~~~~~~~~~~ 220 (326)
.+++...+.++.++|.+++++++.|+++++..+ ..+++++. ...+.++.+++++ |++.+ +...++++..
T Consensus 301 ------~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l~~~~~ 374 (478)
T 2ivd_A 301 ------PLDDALAALVAGIAYAPIAVVHLGFDAGTLPAPDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLYSCMVG 374 (478)
T ss_dssp ------TTCHHHHHHHHTCCBCCEEEEEEEECTTSSCCCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEEEEEEE
T ss_pred ------ccCHHHHHHHhcCCCCcEEEEEEEEccccCCCCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEEEEEeC
Confidence 356677788899999999999999998865432 23344432 2234456666554 44433 2335666655
Q ss_pred HHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCCCe-----eeccCCCeEE
Q 020469 221 ADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEERC-----LWDVKRRLAI 295 (326)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~~~-----~~~~~~~l~~ 295 (326)
..++....+. +++++.+.+++.+.++.+....|....+++|.++.|.+.+++.... .....++|++
T Consensus 375 ~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~ 445 (478)
T 2ivd_A 375 GARQPGLVEQ---------DEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLERVAAIDAALQRLPGLHL 445 (478)
T ss_dssp CTTCGGGGGS---------CHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHHHHHHHHHHHTSTTEEE
T ss_pred CcCCccccCC---------CHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHHHHHHHHHHhhCCCEEE
Confidence 4443322222 4577888888888876544456888889999999988766531100 0111479999
Q ss_pred eeCCCCCCChhHHHHHHHHHHHHHHhhhc
Q 020469 296 CGDFCVSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 296 aGD~~~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
||||+.|.+||+|++||+++|++|+..++
T Consensus 446 aG~~~~g~gv~gA~~SG~~aA~~i~~~l~ 474 (478)
T 2ivd_A 446 IGNAYKGVGLNDCIRNAAQLADALVAGNT 474 (478)
T ss_dssp CSTTTSCCSHHHHHHHHHHHHHHHCC---
T ss_pred EccCCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 99999888999999999999999987664
No 7
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.84 E-value=1.7e-20 Score=178.73 Aligned_cols=230 Identities=11% Similarity=0.119 Sum_probs=160.9
Q ss_pred eEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCC-eEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCC
Q 020469 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (326)
Q Consensus 71 ~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~ 149 (326)
.|...+||++|+++|++.++.+|+++++|++|.. ++++ |.|.+ +|+.+ .+|+||+| +|++.+..++-.|
T Consensus 207 ~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~~v~v~~-~~~~~-~ad~VI~a---~p~~~~~~l~~~p--- 276 (453)
T 2yg5_A 207 DKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKW--NESGATVLAD-GDIRV-EASRVILA---VPPNLYSRISYDP--- 276 (453)
T ss_dssp CEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEE--ETTEEEEEET-TTEEE-EEEEEEEC---SCGGGGGGSEEES---
T ss_pred eEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEE--eCCceEEEEE-CCeEE-EcCEEEEc---CCHHHHhcCEeCC---
Confidence 4778999999999999988888999999999997 5667 99887 55554 79999999 7888776664212
Q ss_pred CCCcChHHHHHhccCCCcceeeeeeecCCCCCC-CCCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHHhH
Q 020469 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVI 228 (326)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~~~ 228 (326)
.+++...+.++.++|.++.++++.|++++|. .++.|..+....++.++.. ++.|... ...++.+....++....
T Consensus 277 --~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~-~~~~~~~--~~~l~~~~~~~~~~~~~ 351 (453)
T 2yg5_A 277 --PLPRRQHQMHQHQSLGLVIKVHAVYETPFWREDGLSGTGFGASEVVQEVYD-NTNHEDD--RGTLVAFVSDEKADAMF 351 (453)
T ss_dssp --CCCHHHHHHGGGEEECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCEEEE-CCCTTCS--SEEEEEEEEHHHHHHHH
T ss_pred --CCCHHHHHHHhcCCCcceEEEEEEECCCCCCCCCCCceeecCCCCeEEEEe-CCCCCCC--CCEEEEEeccHHHHHHh
Confidence 3556677788899999999999999998763 2344555545556666544 4444321 23566666666665443
Q ss_pred hhcCCCCCchhhHHHHHHHHHHHHHhcCC-CCCCcceeeeeecCCC---C----CCCCCCCC---CCeeeccCCCeEEee
Q 020469 229 AQTGLQKPSEATLKKVAEEMFQEFQGTGL-SIPLPIFRKAHRWGSA---F----PAASIAKE---ERCLWDVKRRLAICG 297 (326)
Q Consensus 229 ~~~~~~~~~~~~~~~v~~~l~~~~~~~~~-~~~~p~~~~~~rW~~A---~----p~~~~~~~---~~~~~~~~~~l~~aG 297 (326)
+. +++++.+.+++.+.++.+ ....|.....++|... . +.+.+++. .+.+..+.++|++||
T Consensus 352 ~~---------~~~~~~~~~l~~L~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG 422 (453)
T 2yg5_A 352 EL---------SAEERKATILASLARYLGPKAEEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSC 422 (453)
T ss_dssp HS---------CHHHHHHHHHHHHHHHHCGGGGCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECC
T ss_pred cC---------CHHHHHHHHHHHHHHHhCccCCCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEee
Confidence 32 356677777777776433 2346888888999732 1 11222210 012334568999999
Q ss_pred CCC---CCCChhHHHHHHHHHHHHHHhhhc
Q 020469 298 DFC---VSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 298 D~~---~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
|++ ..++||||++||+++|++|+..|+
T Consensus 423 ~~~~~~~~g~v~gA~~SG~~aA~~i~~~l~ 452 (453)
T 2yg5_A 423 SDIAAEGYQHVDGAVRMGQRTAADIIARSK 452 (453)
T ss_dssp GGGCSTTTTSHHHHHHHHHHHHHHHHHHC-
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHhc
Confidence 986 346899999999999999998764
No 8
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.82 E-value=2.8e-19 Score=173.48 Aligned_cols=232 Identities=15% Similarity=0.136 Sum_probs=160.3
Q ss_pred ceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCC
Q 020469 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~ 149 (326)
..+...+||++|+++|++.++.+|+++++|++|.. ++++|.|.+.+|+.+ .||+||+| +|++.+..++-.|
T Consensus 206 ~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~VI~a---~p~~~l~~l~~~p--- 276 (520)
T 1s3e_A 206 QERKFVGGSGQVSERIMDLLGDRVKLERPVIYIDQ--TRENVLVETLNHEMY-EAKYVISA---IPPTLGMKIHFNP--- 276 (520)
T ss_dssp TSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEEC--SSSSEEEEETTSCEE-EESEEEEC---SCGGGGGGSEEES---
T ss_pred ceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEEE--CCCeEEEEECCCeEE-EeCEEEEC---CCHHHHcceeeCC---
Confidence 34778999999999999988888999999999987 677899988888765 79999999 8888877664212
Q ss_pred CCCcChHHHHHhccCCCcceeeeeeecCCCCCC-CCCCceee--cCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHH
Q 020469 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS-IPVKGFSF--QDSEVLSWAHCDSSKPGRSANSERWVLHSTADYART 226 (326)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-~p~~g~~~--~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~ 226 (326)
.+++...+.++.++|.++.++++.|++++|. .++.|..+ ....++.++ ++++++... ...++.......+..
T Consensus 277 --~lp~~~~~~i~~~~~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~~-~d~~~~~~~--~~~l~~~~~~~~a~~ 351 (520)
T 1s3e_A 277 --PLPMMRNQMITRVPLGSVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAYT-LDDTKPEGN--YAAIMGFILAHKARK 351 (520)
T ss_dssp --CCCHHHHHHTTSCCBCCEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSEE-EECCCTTSC--SCEEEEEEETHHHHH
T ss_pred --CCCHHHHHHHHhCCCcceEEEEEEeCCCcccCCCCCceeeccCCCCceEEE-eeCCCCCCC--CCEEEEEccchhhhh
Confidence 3556677888999999999999999999874 23445444 333456554 444543211 124444444443333
Q ss_pred hHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecCCC---C----CCCCCCCC---CCeeeccCCCeE
Q 020469 227 VIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWGSA---F----PAASIAKE---ERCLWDVKRRLA 294 (326)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~~A---~----p~~~~~~~---~~~~~~~~~~l~ 294 (326)
..+. +++++.+.+++.+.++.+. ...|.....++|... . +..+++.. .+.+..+.++|+
T Consensus 352 ~~~~---------~~~e~~~~vl~~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~ 422 (520)
T 1s3e_A 352 LARL---------TKEERLKKLCELYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIY 422 (520)
T ss_dssp HTTS---------CHHHHHHHHHHHHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEE
T ss_pred hhcC---------CHHHHHHHHHHHHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEE
Confidence 2221 3466667777777664332 346888889999742 1 11222210 112234557999
Q ss_pred EeeCCC---CCCChhHHHHHHHHHHHHHHhhhc
Q 020469 295 ICGDFC---VSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 295 ~aGD~~---~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
+||+++ ..++||||++||+++|++|+..+.
T Consensus 423 fAG~~t~~~~~g~v~GAi~SG~~aA~~i~~~l~ 455 (520)
T 1s3e_A 423 FAGTETATHWSGYMEGAVEAGERAAREILHAMG 455 (520)
T ss_dssp ECSGGGCSSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred EeehhhcCcCcEEhHHHHHHHHHHHHHHHHHHh
Confidence 999986 456899999999999999998764
No 9
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.80 E-value=7.6e-20 Score=176.60 Aligned_cols=236 Identities=16% Similarity=0.181 Sum_probs=156.1
Q ss_pred ceEEeCCCchHHHHHHhcCCC-CeeEcceeEeeEEeecCCCC------eEEEcc--CC---CccccccEEEeccCCCCCc
Q 020469 70 KKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNL------WSVSGL--DG---QSLGQFNGVVASDKNVVSP 137 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~------w~l~~~--~g---~~~~~~d~VVla~~~~pap 137 (326)
..|..++||++|+++|++.++ .+|+++++|++|.. ++++ |.|... +| +. ..||+||+| +|++
T Consensus 234 ~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~--~~~~~~~~~~~~v~~~~~~g~~~~~-~~ad~VI~a---~p~~ 307 (504)
T 1sez_A 234 GSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSC--SCTEDSAIDSWSIISASPHKRQSEE-ESFDAVIMT---APLC 307 (504)
T ss_dssp SCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEE--ECSSSSSSCEEEEEEBCSSSSCBCC-CEESEEEEC---SCHH
T ss_pred ceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEe--cCCCCcccceEEEEEcCCCCcccee-EECCEEEEC---CCHH
Confidence 367789999999999999987 78999999999997 4455 877654 45 33 379999999 8888
Q ss_pred chhhhcCCCCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCC--CceeecCCC-----ceeeeeecCCC-CCCC
Q 020469 138 RFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPV--KGFSFQDSE-----VLSWAHCDSSK-PGRS 209 (326)
Q Consensus 138 ~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~--~g~~~~~~~-----~l~w~~~~ssk-pgr~ 209 (326)
.+.+++.-+. ...+.+. .+..+.|.++.++.+.|+++.+..+. .+++++..+ .+..+.+.+.+ |.+.
T Consensus 308 ~l~~ll~~~~--~~~~~~~---~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~~~~~~ 382 (504)
T 1sez_A 308 DVKSMKIAKR--GNPFLLN---FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRA 382 (504)
T ss_dssp HHHTSEEESS--SSBCCCT---TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHHCGGGS
T ss_pred HHHHHhhccc--CCcccHH---HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccccCCcC
Confidence 8887762000 0012222 16678899999999999987654232 344454321 11112222212 3333
Q ss_pred CCC-ceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCCC----
Q 020469 210 ANS-ERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEER---- 284 (326)
Q Consensus 210 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~~---- 284 (326)
+.+ ..++++.....+...... +++++.+.+++.+.++.+....|....++||.+++|.+..++...
T Consensus 383 p~g~~~l~~~~~g~~~~~~~~~---------~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~~~~~~ 453 (504)
T 1sez_A 383 PNNVYLYTTFVGGSRNRELAKA---------SRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAI 453 (504)
T ss_dssp CTTEEEEEEEEESTTCGGGTTC---------CHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHHHHHHH
T ss_pred CCCCEEEEEEeCCCCcccccCC---------CHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHHHHHHH
Confidence 322 223444333222222111 356777777788877644334688899999999999887764211
Q ss_pred -eeeccCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhhcc
Q 020469 285 -CLWDVKRRLAICGDFCVSPNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 285 -~~~~~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
....+.++|++||+++.|.+|++|+.||.++|++|+..+.+
T Consensus 454 ~~~~~~~~~l~~aG~~~~g~~v~gai~sG~~aA~~il~~l~~ 495 (504)
T 1sez_A 454 DKMEKNLPGLFYAGNHRGGLSVGKALSSGCNAADLVISYLES 495 (504)
T ss_dssp HHHHHHSTTEEECCSSSSCSSHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHhCCCEEEEeecCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 01234679999999999999999999999999999987753
No 10
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.80 E-value=1.1e-18 Score=164.64 Aligned_cols=225 Identities=12% Similarity=0.048 Sum_probs=157.2
Q ss_pred EEeCCCchHHHHHHhcCC---CCeeEcceeEeeEEeecCCCCeE-EEccCCCccccccEEEeccCCCCCcchhhhcCCCC
Q 020469 72 YVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (326)
Q Consensus 72 yv~~~Gm~~l~~~La~~l---~~~i~~~~~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~ 147 (326)
+...+||..|++.|++.+ |++|+++++|++|.. ++++|. |.++ |+.+ .+|.||+| +|++.+..|+.-..
T Consensus 189 ~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~~~gv~~~-g~~~-~ad~VV~a---~~~~~~~~ll~~~~ 261 (425)
T 3ka7_A 189 GIPEGGCKGIIDALETVISANGGKIHTGQEVSKILI--ENGKAAGIIAD-DRIH-DADLVISN---LGHAATAVLCSEAL 261 (425)
T ss_dssp EEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEET-TEEE-ECSEEEEC---SCHHHHHHHTTTTC
T ss_pred cccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEE--ECCEEEEEEEC-CEEE-ECCEEEEC---CCHHHHHHhcCCcc
Confidence 566899999999998764 678999999999997 566776 6554 6554 79999999 78888888874211
Q ss_pred CCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceeecCC-CceeeeeecCCC-CCCCCCC-ceEEEEeCHHHH
Q 020469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS-EVLSWAHCDSSK-PGRSANS-ERWVLHSTADYA 224 (326)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~~~~-~~l~w~~~~ssk-pgr~~~~-~~~~~~~~~~~~ 224 (326)
. ...++.+.+.++.+++.+.+++.+.|++++. +..+++++.+ ..+.++...|.+ |++.+.+ ..+.++....|
T Consensus 262 ~--~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~- 336 (425)
T 3ka7_A 262 S--KEADAAYFKMVGTLQPSAGIKICLAADEPLV--GHTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQYVAP- 336 (425)
T ss_dssp C--TTTTHHHHHHHHHCCCBEEEEEEEEESSCSS--CSSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEEECG-
T ss_pred c--ccCCHHHHHHhhCcCCCceEEEEeecCCCcc--CcCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEecccc-
Confidence 0 0124567778889999999999999998763 4556666443 345556666555 6666533 33334433222
Q ss_pred HHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCC-CeeeccCCCeEEeeCCCCC-
Q 020469 225 RTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEE-RCLWDVKRRLAICGDFCVS- 302 (326)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~-~~~~~~~~~l~~aGD~~~g- 302 (326)
+..+ ..++..+.+++++.++.+. ..++...+++|+.+.|++..++.. +....+.++|++||||+.+
T Consensus 337 -~~~~----------~~~~~~~~~~~~l~~~~p~-~~~~~~~v~~~~~~~P~~~~~~~~~~~~~~p~~gL~laG~~~~~~ 404 (425)
T 3ka7_A 337 -ENVK----------NLESEIEMGLEDLKEIFPG-KRYEVLLIQSYHDEWPVNRAASGTDPGNETPFSGLYVVGDGAKGK 404 (425)
T ss_dssp -GGGG----------GHHHHHHHHHHHHHHHSTT-CCEEEEEEEEEBTTBCSBSSCTTCCCCSBCSSBTEEECSTTSCCT
T ss_pred -cccc----------chHHHHHHHHHHHHHhCCC-CceEEEEEEEECCCccccccccCCCCCCCCCcCCeEEeCCccCCC
Confidence 1111 1234457788888887654 457777899999999999877521 1122344689999999877
Q ss_pred --CChhHHHHHHHHHHHHHH
Q 020469 303 --PNVEGAILSGLDAASKLT 320 (326)
Q Consensus 303 --~~vegA~~SG~~aA~~l~ 320 (326)
.+||+|+.||+++|++|+
T Consensus 405 gg~gv~~~~~s~~~~~~~i~ 424 (425)
T 3ka7_A 405 GGIEVEGVALGVMSVMEKVL 424 (425)
T ss_dssp TCCHHHHHHHHHHHHHHC--
T ss_pred CCCccHHHHHHHHHHHHHhh
Confidence 799999999999999886
No 11
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.78 E-value=1.8e-18 Score=166.45 Aligned_cols=232 Identities=14% Similarity=0.058 Sum_probs=157.6
Q ss_pred CceEEeCCCchHHHHHHhcCCC-CeeEcceeEeeEEeecCCCCeEEEccCC---CccccccEEEeccCCCCCcchhhhcC
Q 020469 69 NKKYVGVPGMNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDG---QSLGQFNGVVASDKNVVSPRFRDVTG 144 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g---~~~~~~d~VVla~~~~pap~~~~ll~ 144 (326)
...|...+||++|+++|++.++ .+|+++++|++|.+ ++++|.|.+.+| +. ..||+||+| +|++.+..++.
T Consensus 229 ~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~~~-~~ad~vI~a---~p~~~l~~l~~ 302 (489)
T 2jae_A 229 MMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKN--VSEGVTVEYTAGGSKKS-ITADYAICT---IPPHLVGRLQN 302 (489)
T ss_dssp SSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEE--ETTEEEEEEEETTEEEE-EEESEEEEC---SCHHHHTTSEE
T ss_pred ccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEE--cCCeEEEEEecCCeEEE-EECCEEEEC---CCHHHHHhCcc
Confidence 3567889999999999999887 78999999999998 667899987766 33 379999999 77776655542
Q ss_pred CCCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCC--CCCCceeecCCCceeeeeecCCCCCCCCCCceEE-EEeCH
Q 020469 145 RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWV-LHSTA 221 (326)
Q Consensus 145 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~--~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~-~~~~~ 221 (326)
.+++...+.++.++|.++.++.+.|++++|. ....|.+...+.++.++.+.+.+.. .+ ...++ .....
T Consensus 303 -------~l~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~~~~g~~~~~~~~~~~~~~~s~~~~-~~-~~~l~~~~~~g 373 (489)
T 2jae_A 303 -------NLPGDVLTALKAAKPSSSGKLGIEYSRRWWETEDRIYGGASNTDKDISQIMFPYDHYN-SD-RGVVVAYYSSG 373 (489)
T ss_dssp -------CCCHHHHHHHHTEECCCEEEEEEEESSCHHHHTTCCCSCEEEESSTTCEEECCSSSTT-SS-CEEEEEEEEET
T ss_pred -------CCCHHHHHHHHhCCCccceEEEEEeCCCCccCCCCcccccccCCCCceEEEeCCCCCC-CC-CCEEEEEeeCC
Confidence 3556777888999999999999999998763 1334333222335555666655421 11 12332 23344
Q ss_pred HHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecCCCCCC---CC---------CCCCC---C
Q 020469 222 DYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWGSAFPA---AS---------IAKEE---R 284 (326)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~~A~p~---~~---------~~~~~---~ 284 (326)
..+...... +++++.+.+++.+.++.+. ...|.....++|...... +. ++... +
T Consensus 374 ~~~~~~~~~---------~~~~~~~~~l~~L~~~~~~~~~~~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~ 444 (489)
T 2jae_A 374 KRQEAFESL---------THRQRLAKAIAEGSEIHGEKYTRDISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYE 444 (489)
T ss_dssp HHHHHHHTS---------CHHHHHHHHHHHHHHHHCGGGGSSEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHH
T ss_pred chhhhhhcC---------CHHHHHHHHHHHHHHHcCcchhhhccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHH
Confidence 444433222 3566777777777765443 245777778999764211 10 11000 0
Q ss_pred eeeccCCCeEEeeCCC--CCCChhHHHHHHHHHHHHHHhhhc
Q 020469 285 CLWDVKRRLAICGDFC--VSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 285 ~~~~~~~~l~~aGD~~--~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
.+..+.++|++||+++ .+++|+||+.||.++|++|+..+.
T Consensus 445 ~l~~~~~~l~faG~~~~~~~~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 445 KLLEPVDKIYFAGDHLSNAIAWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp HHTSCBTTEEECSGGGBSSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcEEEeEHHhccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 1224567999999976 588999999999999999998775
No 12
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.78 E-value=7.7e-18 Score=161.39 Aligned_cols=227 Identities=16% Similarity=0.165 Sum_probs=154.1
Q ss_pred CCCchHHHHHHhcCC-----------CCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhc
Q 020469 75 VPGMNSICKALCHQP-----------GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVT 143 (326)
Q Consensus 75 ~~Gm~~l~~~La~~l-----------~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll 143 (326)
.+||++|+++|++.+ +.+|+++++|++|.. .+++|.|.+.+|+.+ .+|+||+| +|+..+..++
T Consensus 202 ~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vI~a---~~~~~l~~~~ 275 (472)
T 1b37_A 202 QRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKY--SPGGVTVKTEDNSVY-SADYVMVS---ASLGVLQSDL 275 (472)
T ss_dssp TTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEE--CSSCEEEEETTSCEE-EESEEEEC---SCHHHHHTTS
T ss_pred CCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEE--cCCcEEEEECCCCEE-EcCEEEEe---cCHHHhccCC
Confidence 689999999999875 457999999999998 677899998888655 79999999 7777766643
Q ss_pred C-CCCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCC-CCCceee-cCCC---ceeeeeecCCCCCCCCCCceEEE
Q 020469 144 G-RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PVKGFSF-QDSE---VLSWAHCDSSKPGRSANSERWVL 217 (326)
Q Consensus 144 ~-~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~-p~~g~~~-~~~~---~l~w~~~~sskpgr~~~~~~~~~ 217 (326)
. +.+ .+++...+.++.+.|.++.++.+.|++++|.. +..++.+ .+.. ...|...+...|+ ...+++
T Consensus 276 ~~~~p----~Lp~~~~~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~----~~~l~~ 347 (472)
T 1b37_A 276 IQFKP----KLPTWKVRAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQEFEKQYPD----ANVLLV 347 (472)
T ss_dssp SEEES----CCCHHHHHHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEECTTTSTT----CCEEEE
T ss_pred eeECC----CCCHHHHHHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeecccCCCCC----CCEEEE
Confidence 1 112 35566677888899999999999999998753 2222332 1111 1234333333333 224444
Q ss_pred EeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecC------CCCCCCCCCCCC---Cee
Q 020469 218 HSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWG------SAFPAASIAKEE---RCL 286 (326)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~------~A~p~~~~~~~~---~~~ 286 (326)
...+..++ .++.- +++++.+.+++.+.++.+. .+.|....+++|. -+.+..++|+.. +.+
T Consensus 348 ~~~~~~a~-~~~~~--------~~~e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l 418 (472)
T 1b37_A 348 TVTDEESR-RIEQQ--------SDEQTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQL 418 (472)
T ss_dssp EEEHHHHH-HHHTS--------CHHHHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHH
T ss_pred EechHHHH-HHHhC--------CHHHHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHH
Confidence 44444433 23321 4577888888888876532 3567777789993 233323333211 122
Q ss_pred eccCCCeEEeeCCCC---CCChhHHHHHHHHHHHHHHhhhc
Q 020469 287 WDVKRRLAICGDFCV---SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~---g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
..+.++|+|||+++. +++||||++||+++|++|+..+.
T Consensus 419 ~~p~~~l~fAG~~t~~~~~g~v~GA~~SG~~aA~~i~~~l~ 459 (472)
T 1b37_A 419 RAPVGRVYFTGEHTSEHYNGYVHGAYLSGIDSAEILINCAQ 459 (472)
T ss_dssp HCCBTTEEECSGGGCTTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCcEEEeecccCCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 345679999999975 56999999999999999998764
No 13
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.76 E-value=2e-18 Score=166.26 Aligned_cols=224 Identities=15% Similarity=0.169 Sum_probs=154.1
Q ss_pred eEEeCCCchHHHHHHhcCC---C-CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCC
Q 020469 71 KYVGVPGMNSICKALCHQP---G-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRP 146 (326)
Q Consensus 71 ~yv~~~Gm~~l~~~La~~l---~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~ 146 (326)
.|...+||..|++.|++.+ + ++|+++++|++|+. ++++|.|.+.+|+.+ .+|+||+| +|++.+..++-.|
T Consensus 247 ~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vI~a---~~~~~l~~i~~~p 320 (495)
T 2vvm_A 247 SYKFKDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVN--ERDAARVTARDGREF-VAKRVVCT---IPLNVLSTIQFSP 320 (495)
T ss_dssp SEEETTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEE--CSSSEEEEETTCCEE-EEEEEEEC---CCGGGGGGSEEES
T ss_pred eEEeCCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEE--cCCEEEEEECCCCEE-EcCEEEEC---CCHHHHhheeeCC
Confidence 5778999999999998865 3 56999999999997 667899988888654 79999999 7888777654212
Q ss_pred CCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHH
Q 020469 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYART 226 (326)
Q Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~ 226 (326)
.+++...+.++.+.|.++.++++.|+++.|. ++.|+..+ +.++.++..++..|+. ...++.... ...
T Consensus 321 -----~lp~~~~~ai~~~~~~~~~kv~l~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~---~~vl~~~~~-~~~-- 387 (495)
T 2vvm_A 321 -----ALSTERISAMQAGHVSMCTKVHAEVDNKDMR-SWTGIAYP-FNKLCYAIGDGTTPAG---NTHLVCFGN-SAN-- 387 (495)
T ss_dssp -----CCCHHHHHHHHHCCCCCCEEEEEEESCGGGG-GEEEEECS-SCSSCEEEEEEECTTS---CEEEEEEEC-STT--
T ss_pred -----CCCHHHHHHHHhcCCCceeEEEEEECCccCC-CceeEecC-CCCcEEEecCCCCCCC---CeEEEEEeC-ccc--
Confidence 3556677788899999999999999998753 45555443 3456666655544432 223444332 111
Q ss_pred hHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecC---C---CCCCCCCCCC---CCeeeccCCCeEEee
Q 020469 227 VIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWG---S---AFPAASIAKE---ERCLWDVKRRLAICG 297 (326)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~---~---A~p~~~~~~~---~~~~~~~~~~l~~aG 297 (326)
++. .++.. +.+++.+.++.+....|....+++|. | +.+..+++.. .+.+..+.++|+|||
T Consensus 388 ~~~-------~~e~~----~~~~~~L~~~~~~~~~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAG 456 (495)
T 2vvm_A 388 HIQ-------PDEDV----RETLKAVGQLAPGTFGVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFAN 456 (495)
T ss_dssp CCC-------TTTCH----HHHHHHHHTTSTTSCCEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECC
T ss_pred cCC-------CHHHH----HHHHHHHHHhcCCCCCceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEec
Confidence 111 11223 34456666665544568888899994 3 3333333321 112335678999999
Q ss_pred CCCC---CCChhHHHHHHHHHHHHHHhhhc
Q 020469 298 DFCV---SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 298 D~~~---g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
|++. .++||||++||+++|++|+..+.
T Consensus 457 e~t~~~~~g~veGAi~SG~raA~~i~~~l~ 486 (495)
T 2vvm_A 457 SDWALGWRSFIDGAIEEGTRAARVVLEELG 486 (495)
T ss_dssp GGGCSSSTTSHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhcCCceEEEhHHHHHHHHHHHHHHHhc
Confidence 9975 57899999999999999998775
No 14
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.76 E-value=1.5e-15 Score=132.28 Aligned_cols=280 Identities=30% Similarity=0.560 Sum_probs=167.1
Q ss_pred eecccCCCceeeCChhHHHHHHHHHhCCccccccCceeeeeccCcceeecccCCCCceEEeCCCchHHHHHHhcCCCCee
Q 020469 14 MLFDHGAPFFTVTNNDVLALVREWESGGLVAEWKVNLGSFDRVSKKFVNIQQDGMNKKYVGVPGMNSICKALCHQPGVES 93 (326)
Q Consensus 14 ~~~DhGAq~ft~~~~~f~~~~~~~~~~g~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~yv~~~Gm~~l~~~La~~l~~~i 93 (326)
..+|||+|||+.++..|...+..+...+....+............. ........+....++............ +
T Consensus 49 ~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 122 (336)
T 3kkj_A 49 GALDMGAQYFTARDRRFATAVKQWQAQGHVAEWTPLLYNFHAGRLS----PSPDEQVRWVGKPGMSAITRAMRGDMP--V 122 (336)
T ss_dssp EEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEECCCEEEESSSBCC----CCCTTSCEEEESSSTHHHHHHHHTTCC--E
T ss_pred ceeecCccccccCcHHHHHHHHHHHhcccccccccccccccccccc----ccccccceeecccccccchhcccccce--e
Confidence 4799999999999999999999998888777776654433211110 123446678888888888888776544 5
Q ss_pred EcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCCcChHHHHHhccCCCcceeeee
Q 020469 94 KFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALM 173 (326)
Q Consensus 94 ~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 173 (326)
........... ..+.+.+....+........++.+ .........+. .............+.......
T Consensus 123 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 189 (336)
T 3kkj_A 123 SFSCRITEVFR--GEEHWNLLDAEGQNHGPFSHVIIA---TPAPQASTLLA--------AAPKLASVVAGVKMDPTWAVA 189 (336)
T ss_dssp ECSCCEEEEEE--CSSCEEEEETTSCEEEEESCEEEC---SCHHHHGGGGT--------TCHHHHHHHTTCCEEEEEEEE
T ss_pred ecceeeccccc--ccccccccccccccccccccceec---cccchhhhhhc--------ccccccccccccccccchhhh
Confidence 56666666654 445566655554332223333343 11222111111 112223333444455555555
Q ss_pred eecCCCCCCCCCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHH
Q 020469 174 LAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQ 253 (326)
Q Consensus 174 l~~~~~~~~~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~ 253 (326)
..+...... ....... ......+........+.....................+. ......+.....+.
T Consensus 190 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 258 (336)
T 3kkj_A 190 LAFETPLQT-PMQGCFV-QDSPLDWLARNRSKPERDDTLDTWILHATSQWSRQNLDA---------SREQVIEHLHGAFA 258 (336)
T ss_dssp EEESSCCSC-CCCEEEE-CSSSEEEEEEGGGSTTCCCSSEEEEEEECHHHHHHTTTS---------CHHHHHHHHHHHHH
T ss_pred hcccccccc-ccccccc-cccccccccccccccccccccccceeccccccccccccc---------cchhhhhhhhhhhh
Confidence 555544321 1111111 112222333333332222222334455555555444332 23444455555555
Q ss_pred hc-CCCCCCcceeeeeecCCCCCCCCCCCCCCeeeccCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhhcc
Q 020469 254 GT-GLSIPLPIFRKAHRWGSAFPAASIAKEERCLWDVKRRLAICGDFCVSPNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 254 ~~-~~~~~~p~~~~~~rW~~A~p~~~~~~~~~~~~~~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
.. ....+.+.+..+|||+|++|..+.. ..++++..++|++||||+.|++|++|+.||+.||++|++.|+.
T Consensus 259 ~~~~~~~~~~~~~~~~~w~~a~~~~~~~--~~~~~~~~~~v~l~GDa~~g~gv~~A~~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 259 ELIDCTMPAPVFSLAHRWLYARPAGAHE--WGALSDADLGIYVCGDWCLSGRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TTCSSCCCCCSEEEEEEEEEEEESSCCC--CSSEEETTTTEEECCGGGTTSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhccCCcCcchheeccceeecccccccC--ccceeeCCCCEEEEecccCCcCHHHHHHHHHHHHHHHHHHhhc
Confidence 43 3445678999999999999887654 4567778899999999999999999999999999999998863
No 15
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.75 E-value=1.4e-17 Score=157.12 Aligned_cols=213 Identities=15% Similarity=0.122 Sum_probs=142.7
Q ss_pred eEEeCCCchHHHHHHhcC---CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCC
Q 020469 71 KYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPP 147 (326)
Q Consensus 71 ~yv~~~Gm~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~ 147 (326)
.+...+||..|++.|++. .|++|+++++|++|.. ++++| |.+ +|+.+ .+|.||+| +|++.+.+|++.+
T Consensus 181 ~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~--~~~~v-V~~-~g~~~-~ad~Vv~a---~~~~~~~~ll~~~- 251 (421)
T 3nrn_A 181 PGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINI--EEKKV-YTR-DNEEY-SFDVAISN---VGVRETVKLIGRD- 251 (421)
T ss_dssp CEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEET--TTTEE-EET-TCCEE-ECSEEEEC---SCHHHHHHHHCGG-
T ss_pred cceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEE--ECCEE-EEe-CCcEE-EeCEEEEC---CCHHHHHHhcCcc-
Confidence 356789999999999864 4689999999999987 67788 754 55554 79999999 7888888887521
Q ss_pred CCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceeecCCCceeeeeecCCC-CCCCCCCc-eEEEEeCHHHHH
Q 020469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSK-PGRSANSE-RWVLHSTADYAR 225 (326)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~~~~~~l~w~~~~ssk-pgr~~~~~-~~~~~~~~~~~~ 225 (326)
.+++...+.+..+.|.+++++.+.++++. ++..++++..+..+..+...+.+ |.+.+.+. .+.++.
T Consensus 252 ----~~~~~~~~~~~~~~~~~~~~v~l~~~~~~--~~~~~~~~~~~~~~~~i~~~s~~~p~~ap~G~~~~~~~~------ 319 (421)
T 3nrn_A 252 ----YFDRDYLKQVDSIEPSEGIKFNLAVPGEP--RIGNTIVFTPGLMINGFNEPSALDKSLAREGYTLIMAHM------ 319 (421)
T ss_dssp ----GSCHHHHHHHHTCCCCCEEEEEEEEESSC--SSCSSEEECTTSSSCEEECGGGTCGGGSCTTEEEEEEEE------
T ss_pred ----cCCHHHHHHHhCCCCCceEEEEEEEcCCc--ccCCeEEEcCCcceeeEeccCCCCCCcCCCCceEEEEEE------
Confidence 24556777888999999999999999873 34456665443225555555555 55555332 233332
Q ss_pred HhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCC--CCCeeeccCCCeEEeeCCCCCC
Q 020469 226 TVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAK--EERCLWDVKRRLAICGDFCVSP 303 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~--~~~~~~~~~~~l~~aGD~~~g~ 303 (326)
+... .+.++..+.+++++.++.+ ......+++|+.++|++.... ..+ ..+ ++|++||||+.++
T Consensus 320 -~~~~--------~~~~~~~~~~~~~L~~~~p---~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~-~gl~laGd~~~~~ 384 (421)
T 3nrn_A 320 -ALKN--------GNVKKAIEKGWEELLEIFP---EGEPLLAQVYRDGNPVNRTRAGLHIE--WPL-NEVLVVGDGYRPP 384 (421)
T ss_dssp -ECTT--------CCHHHHHHHHHHHHHHHCT---TCEEEEEEEC-------------CCC--CCC-SSEEECSTTCCCT
T ss_pred -eecc--------ccHHHHHHHHHHHHHHHcC---CCeEEEeeeccCCCCcccccCCCCCC--CCC-CcEEEECCcccCC
Confidence 1111 0223446777778877655 345567799999999874321 122 455 8999999999988
Q ss_pred -Ch--hHHHHHHHHHHHHH
Q 020469 304 -NV--EGAILSGLDAASKL 319 (326)
Q Consensus 304 -~v--egA~~SG~~aA~~l 319 (326)
++ |+|+.||++||++|
T Consensus 385 ~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 385 GGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp TCCHHHHHHHHHHHHHHHT
T ss_pred CceeeehHHHHHHHHHHHh
Confidence 56 99999999999998
No 16
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.75 E-value=3.7e-17 Score=162.97 Aligned_cols=229 Identities=14% Similarity=0.161 Sum_probs=153.5
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccC------CCccccccEEEeccCCCCCcchhhh
Q 020469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD------GQSLGQFNGVVASDKNVVSPRFRDV 142 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~------g~~~~~~d~VVla~~~~pap~~~~l 142 (326)
...|..++||++|+++|++++ +|+++++|++|.+ ++++|.|++.+ |+.+ .||+||+| +|+..+.++
T Consensus 391 g~~~~~~gG~~~l~~~La~~l--~I~l~~~V~~I~~--~~~~v~V~~~~~~~~~~~~~~-~Ad~VI~t---vP~~vL~~l 462 (662)
T 2z3y_A 391 GSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRY--TASGCEVIAVNTRSTSQTFIY-KCDAVLCT---LPLGVLKQQ 462 (662)
T ss_dssp SCCEEETTCTTHHHHHHTTTC--EEETTEEEEEEEE--ETTEEEEEEEESSCTTCEEEE-EESEEEEC---CCHHHHHCS
T ss_pred CceeeecCcHHHHHHHHHhcC--ceecCCeEEEEEE--CCCcEEEEEeecccCCCCeEE-EeCEEEEC---CCHHHHhcc
Confidence 356888999999999999866 5999999999998 66789988755 3333 79999999 777766553
Q ss_pred c---CCCCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCcee--ecCC--CceeeeeecCCCCCCCCCCceE
Q 020469 143 T---GRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFS--FQDS--EVLSWAHCDSSKPGRSANSERW 215 (326)
Q Consensus 143 l---~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~--~~~~--~~l~w~~~~sskpgr~~~~~~~ 215 (326)
. .+.| .+++...++++.+.|.++.++.+.|++++|..+..++. .+.. ....++.+++++ . ..+
T Consensus 463 ~~~i~f~P----~LP~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~~~~~~G~l~~~~~~~~~~~~~~~~~~---~---~vL 532 (662)
T 2z3y_A 463 PPAVQFVP----PLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYK---A---PIL 532 (662)
T ss_dssp SCSSEEES----CCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCSEEEECCSSSTTTTEEEEEECCSS---S---SEE
T ss_pred cCceEEcC----CCCHHHHHHHHhCCccceeEEEEEcCcccccCCCCceeeecCCCCCCCceeEEEeCCC---C---CEE
Confidence 1 1222 35556677889999999999999999999853323332 2211 112234455542 1 245
Q ss_pred EEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecCCC------CCCCCCCCCC---C
Q 020469 216 VLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWGSA------FPAASIAKEE---R 284 (326)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~~A------~p~~~~~~~~---~ 284 (326)
+.......+...... +++++.+.+++.+.++.+. .+.|....++||... ....++|... .
T Consensus 533 ~~~~~G~~a~~~~~l---------sdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~ 603 (662)
T 2z3y_A 533 LALVAGEAAGIMENI---------SDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYD 603 (662)
T ss_dssp EEEECTHHHHHHTTS---------CHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHH
T ss_pred EEEeccHhHHHHHhC---------CHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHH
Confidence 555555555543222 3566777777777765432 357888999999853 1111122100 0
Q ss_pred ee-------------eccCCCeEEeeCCCC---CCChhHHHHHHHHHHHHHHhhhc
Q 020469 285 CL-------------WDVKRRLAICGDFCV---SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 285 ~~-------------~~~~~~l~~aGD~~~---g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
.+ ..+.++|+|||+++. .++||||++||+++|++|++.+.
T Consensus 604 ~l~~p~~~~~~~~~~~~~~grl~FAGe~ts~~~~g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 604 LMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp HHHCCBCC---------CCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhCcCccccccccccCCCCcEEEEeccccCCCCcCHHHHHHHHHHHHHHHHHHcc
Confidence 01 123479999999865 47999999999999999998764
No 17
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.74 E-value=5.7e-17 Score=164.48 Aligned_cols=228 Identities=14% Similarity=0.159 Sum_probs=154.4
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccC------CCccccccEEEeccCCCCCcchhhh
Q 020469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD------GQSLGQFNGVVASDKNVVSPRFRDV 142 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~------g~~~~~~d~VVla~~~~pap~~~~l 142 (326)
...|..++||++|+++|++.+. |+++++|++|.+ .+++|.|++.+ |+.+ .||+||+| +|+..+..+
T Consensus 562 g~~~~~~gG~~~L~~aLa~~l~--I~Lnt~V~~I~~--~~~gV~V~~~~~~~~~~g~~i-~AD~VIvT---vPl~vLk~l 633 (852)
T 2xag_A 562 GSHLTVRNGYSCVPVALAEGLD--IKLNTAVRQVRY--TASGCEVIAVNTRSTSQTFIY-KCDAVLCT---LPLGVLKQQ 633 (852)
T ss_dssp SCCEEETTCTTHHHHHHTTTCC--EECSEEEEEEEE--ETTEEEEEEEESSSTTCEEEE-EESEEEEC---CCHHHHHCS
T ss_pred CceEEecCcHHHHHHHHHhCCC--EEeCCeEEEEEE--cCCcEEEEEeecccCCCCeEE-ECCEEEEC---CCHHHHHhh
Confidence 3568889999999999999764 999999999998 66788887654 3344 79999999 787776654
Q ss_pred cC---CCCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCce--eecC---CCceeeeeecCCCCCCCCCCce
Q 020469 143 TG---RPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGF--SFQD---SEVLSWAHCDSSKPGRSANSER 214 (326)
Q Consensus 143 l~---~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~--~~~~---~~~l~w~~~~sskpgr~~~~~~ 214 (326)
++ +.+ .+++...++++.+.|.++.+|++.|++++|..+..++ +.+. .+.+ ++.+++.+ . ..
T Consensus 634 ~~~I~F~P----~LP~~k~~AI~~l~~g~v~KV~L~F~~~fW~~~~~~fG~l~~~~~~~~~l-~~~~~~~~---~---pv 702 (852)
T 2xag_A 634 PPAVQFVP----PLPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGEL-FLFWNLYK---A---PI 702 (852)
T ss_dssp SCSSEEES----CCCHHHHHHHHHSEECCCEEEEEECSSCCSCTTCCEEEECCSSSTTTTTT-CEEEECSS---S---SE
T ss_pred hcccccCC----CCCHHHHHHHHcCCccceEEEEEEcCCcccCCCCCeeeeeccccCCCCce-EEEecCCC---C---CE
Confidence 21 112 3555667788999999999999999999985323333 2221 1122 23444432 1 25
Q ss_pred EEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecCCC------CCCCCCCCCC---
Q 020469 215 WVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWGSA------FPAASIAKEE--- 283 (326)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~~A------~p~~~~~~~~--- 283 (326)
++.......+...... +++++.+.+++.+.++.+. .+.|....++||... ....++|...
T Consensus 703 Ll~~v~G~~a~~l~~l---------sdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~ 773 (852)
T 2xag_A 703 LLALVAGEAAGIMENI---------SDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDY 773 (852)
T ss_dssp EEEEECHHHHHHGGGS---------CHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHH
T ss_pred EEEEecCcCHHHHhcC---------CHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhH
Confidence 5555666666543222 4567777777777765432 357889999999863 1111122100
Q ss_pred -----Ce--------eeccCCCeEEeeCCCC---CCChhHHHHHHHHHHHHHHhhhc
Q 020469 284 -----RC--------LWDVKRRLAICGDFCV---SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 284 -----~~--------~~~~~~~l~~aGD~~~---g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
+. +..+.++|+|||+++. .++||||++||.++|++|+..+.
T Consensus 774 ~~L~~P~~~~~~~p~~~~~~grL~FAGE~Ts~~~~gtveGAi~SG~RAA~~Il~~l~ 830 (852)
T 2xag_A 774 DLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREAGRIADQFL 830 (852)
T ss_dssp HHTTSCBCCCCSSTTCCCCCCCEEECSGGGCTTSTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCccccccccccccCCCCcEEEEehhHhCCCCcCHHHHHHHHHHHHHHHHHHhh
Confidence 00 1123479999999864 57999999999999999998764
No 18
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.70 E-value=2e-16 Score=152.42 Aligned_cols=229 Identities=15% Similarity=0.127 Sum_probs=150.1
Q ss_pred ceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCcc---ccccEEEeccCCCCCcchhhhcCCC
Q 020469 70 KKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSL---GQFNGVVASDKNVVSPRFRDVTGRP 146 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~---~~~d~VVla~~~~pap~~~~ll~~~ 146 (326)
..|...+||++|+++|++.++.+|+++++|++|.+ ++++|.|.+.+|+.. ..+|+||+| +|...+..+. +.
T Consensus 232 ~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~--~~~~v~v~~~~~~~~~~~~~ad~vI~t---~p~~~~~~i~-f~ 305 (498)
T 2iid_A 232 RFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQ--NDQKVTVVYETLSKETPSVTADYVIVC---TTSRAVRLIK-FN 305 (498)
T ss_dssp CEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEE--CSSCEEEEEECSSSCCCEEEESEEEEC---SCHHHHTTSE-EE
T ss_pred ceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEE--CCCeEEEEEecCCcccceEEeCEEEEC---CChHHHhhee-cC
Confidence 34567899999999999988667999999999998 677899987776531 279999999 7776554432 11
Q ss_pred CCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCC-CCC-ceeecCCCceeeeeecCCC-CCCCCCCceEEEEeCHHH
Q 020469 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI-PVK-GFSFQDSEVLSWAHCDSSK-PGRSANSERWVLHSTADY 223 (326)
Q Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~-p~~-g~~~~~~~~l~w~~~~ssk-pgr~~~~~~~~~~~~~~~ 223 (326)
+ .+++...++++.++|.+..++.+.|++++|.. .+. +..+.+ .+..++.+.+.. |+. ...++.......
T Consensus 306 p----~Lp~~~~~ai~~l~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~-~~~~~~~~~s~~~p~g---~~~L~~~~~g~~ 377 (498)
T 2iid_A 306 P----PLLPKKAHALRSVHYRSGTKIFLTCTTKFWEDDGIHGGKSTTD-LPSRFIYYPNHNFTNG---VGVIIAYGIGDD 377 (498)
T ss_dssp S----CCCHHHHHHHHHCCEECEEEEEEEESSCGGGGGTCCSSEEEES-STTCEEECCSSCCTTS---CEEEEEEEEHHH
T ss_pred C----CCCHHHHHHHHhCCCcceeEEEEEeCCCCccCCCccCCcccCC-CCcceEEECCCCCCCC---CcEEEEEeCCcc
Confidence 2 36667788899999999999999999998741 222 222322 234455554422 322 224444444443
Q ss_pred HHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCc------ceeeeeecCCCCCCCCCCCC-----------CCee
Q 020469 224 ARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLP------IFRKAHRWGSAFPAASIAKE-----------ERCL 286 (326)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p------~~~~~~rW~~A~p~~~~~~~-----------~~~~ 286 (326)
+...... +++++.+.+++.+.++.+ .+.+ ....+++|.. +++..|.- ...+
T Consensus 378 a~~~~~~---------~~~~~~~~~l~~L~~~~g-~~~~~~~~~~~~~~~~~W~~--~p~~~G~~~~~~~~~~~~~~~~l 445 (498)
T 2iid_A 378 ANFFQAL---------DFKDCADIVFNDLSLIHQ-LPKKDIQSFCYPSVIQKWSL--DKYAMGGITTFTPYQFQHFSDPL 445 (498)
T ss_dssp HHTTTTS---------CHHHHHHHHHHHHHHHHT-CCHHHHHHHEEEEEEEEGGG--CTTTCSSEECCCTTHHHHHHHHH
T ss_pred HhhhhcC---------CHHHHHHHHHHHHHHHcC-CChhhhhhhcCccEEEecCC--CCCCCceeeecCCcchHHHHHHH
Confidence 3322111 346667777777776543 1111 2356789975 22222210 0112
Q ss_pred eccCCCeEEeeCCCC--CCChhHHHHHHHHHHHHHHhhhc
Q 020469 287 WDVKRRLAICGDFCV--SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~--g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
..+.++|+|||+++. .+.|+||++||.++|++|+..+.
T Consensus 446 ~~p~~~l~fAGe~t~~~~g~~~GAi~SG~raA~~i~~~l~ 485 (498)
T 2iid_A 446 TASQGRIYFAGEYTAQAHGWIDSTIKSGLRAARDVNLASE 485 (498)
T ss_dssp HCCBTTEEECSGGGSSSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCcEEEEEcccccCCcCHHHHHHHHHHHHHHHHHHhc
Confidence 345679999999863 47899999999999999998763
No 19
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.70 E-value=2.6e-16 Score=158.59 Aligned_cols=229 Identities=14% Similarity=0.145 Sum_probs=155.2
Q ss_pred CceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhh-hcCCCC
Q 020469 69 NKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRD-VTGRPP 147 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~-ll~~~~ 147 (326)
...+...+||+.|+++|++++ +|+++++|++|+. ++++|.|.+.+|+.+ .+|+||+| +|++.+.. .+.+.+
T Consensus 524 G~~~~~~~G~~~l~~aLa~gl--~I~l~t~V~~I~~--~~~~v~V~~~~G~~i-~Ad~VIvA---~P~~vL~~~~i~f~P 595 (776)
T 4gut_A 524 GDHTLLTPGYSVIIEKLAEGL--DIQLKSPVQCIDY--SGDEVQVTTTDGTGY-SAQKVLVT---VPLALLQKGAIQFNP 595 (776)
T ss_dssp SCEEECTTCTHHHHHHHHTTS--CEESSCCEEEEEC--SSSSEEEEETTCCEE-EESEEEEC---CCHHHHHTTCSEEES
T ss_pred CCeEEECChHHHHHHHHHhCC--cEEcCCeeEEEEE--cCCEEEEEECCCcEE-EcCEEEEC---CCHHHHhhcccccCC
Confidence 445677899999999999865 5999999999997 677899998888654 79999999 77766543 221222
Q ss_pred CCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCC---CCC--ceeecC--CCceeeeeecCCCCCCCCCCceEEEEeC
Q 020469 148 PLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSI---PVK--GFSFQD--SEVLSWAHCDSSKPGRSANSERWVLHST 220 (326)
Q Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~---p~~--g~~~~~--~~~l~w~~~~sskpgr~~~~~~~~~~~~ 220 (326)
.+++...+.++.+.|.+..++.+.|++++|.. +.. |.+.+. ...+..+..+.+..+. ...++....
T Consensus 596 ----~Lp~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~p~g~---~~vL~~~i~ 668 (776)
T 4gut_A 596 ----PLSEKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMDPQKK---HSVLMSVIA 668 (776)
T ss_dssp ----CCCHHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESCTTSC---SCEEEEEEC
T ss_pred ----CCCHHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCCCCCC---ceEEEEEec
Confidence 35667778888999999999999999998841 112 222211 1122234445543332 234555556
Q ss_pred HHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecCCCCCC------CCCCCCC---Ceeecc
Q 020469 221 ADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWGSAFPA------ASIAKEE---RCLWDV 289 (326)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~~A~p~------~~~~~~~---~~~~~~ 289 (326)
+..+....+. +++++.+.+++.+.++.+. .+.|....+++|...--. ...+... ..+..+
T Consensus 669 G~~a~~l~~l---------sdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p 739 (776)
T 4gut_A 669 GEAVASVRTL---------DDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAED 739 (776)
T ss_dssp THHHHHHHTS---------CHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCC
T ss_pred chhHHHHHcC---------CHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCc
Confidence 6655543332 4577888888888876542 457888999999753211 0011100 112223
Q ss_pred -CCCeEEeeCCCC---CCChhHHHHHHHHHHHHHHh
Q 020469 290 -KRRLAICGDFCV---SPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 290 -~~~l~~aGD~~~---g~~vegA~~SG~~aA~~l~~ 321 (326)
.++|+|||+++. .+.||||++||.++|++|+.
T Consensus 740 ~~grL~FAGE~Ts~~~~gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 740 IQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp BTTTEEECSGGGCSSSCSSHHHHHHHHHHHHHHHHC
T ss_pred CCCcEEEEehhhcCCCCcCHHHHHHHHHHHHHHHHh
Confidence 589999999975 57999999999999999975
No 20
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.68 E-value=5e-17 Score=156.33 Aligned_cols=225 Identities=10% Similarity=0.091 Sum_probs=156.2
Q ss_pred EeCCCchHHHHHHhcCCCC-eeEcc--eeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCC
Q 020469 73 VGVPGMNSICKALCHQPGV-ESKFG--VGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPL 149 (326)
Q Consensus 73 v~~~Gm~~l~~~La~~l~~-~i~~~--~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~ 149 (326)
...+||++|+++|++.++. +|+++ ++|++|.. ++++|.+ .+|+.+ .||+||+| +|++++.+++....+
T Consensus 210 p~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~--~~~~v~~--~~G~~~-~ad~VI~a---~p~~~~~~ll~~~~~- 280 (484)
T 4dsg_A 210 PQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDA--DAKTITF--SNGEVV-SYDYLIST---VPFDNLLRMTKGTGF- 280 (484)
T ss_dssp ESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEET--TTTEEEE--TTSCEE-ECSEEEEC---SCHHHHHHHEECSSC-
T ss_pred ecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEe--cCCEEEE--CCCCEE-ECCEEEEC---CCHHHHHHHhhccCC-
Confidence 3458999999999998864 79999 56999987 6666765 567554 79999999 899999988742000
Q ss_pred CCCcChHHHHHhccCCCcceeeeeeecCCCCCC--CCCCceeecCCC-ceeeeeecCCC-CCCCCCCceEEEEeCHHHHH
Q 020469 150 DLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSE-VLSWAHCDSSK-PGRSANSERWVLHSTADYAR 225 (326)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~--~p~~g~~~~~~~-~l~w~~~~ssk-pgr~~~~~~~~~~~~~~~~~ 225 (326)
.+++.+.+.+..++|.++.++.+.|+.+... .+..++++++.+ ++.++...+++ |.+.+.+ .+++.....+.
T Consensus 281 --~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g-~~~l~~e~~~~- 356 (484)
T 4dsg_A 281 --KGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEG-HWSLMLEVSES- 356 (484)
T ss_dssp --TTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTT-EEEEEEEEEEB-
T ss_pred --CCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCC-eEEEEEEEecC-
Confidence 2456788889999999999999999986421 345777776533 44556666665 5654433 33332211111
Q ss_pred HhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCC-Cc-ceeeeeecCCCCCCCCCCCCCCe-----eeccCCCeEEeeC
Q 020469 226 TVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIP-LP-IFRKAHRWGSAFPAASIAKEERC-----LWDVKRRLAICGD 298 (326)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~-~p-~~~~~~rW~~A~p~~~~~~~~~~-----~~~~~~~l~~aGD 298 (326)
..... +++++.+..++++.++++..+ .+ ....++||.++.|++..++.... ..... +|++||.
T Consensus 357 ~~~~~---------~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr 426 (484)
T 4dsg_A 357 KYKPV---------NHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGR 426 (484)
T ss_dssp TTBCC---------CTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECST
T ss_pred cCCcC---------CHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecC
Confidence 11111 346677778888887653222 23 33578999999999998752110 11234 8999998
Q ss_pred ---CCCC-CChhHHHHHHHHHHHHHH
Q 020469 299 ---FCVS-PNVEGAILSGLDAASKLT 320 (326)
Q Consensus 299 ---~~~g-~~vegA~~SG~~aA~~l~ 320 (326)
|.++ .++++|+.||+.+|++|+
T Consensus 427 ~g~~~y~v~~~d~~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 427 FGAWRYEVGNQDHSFMQGVEAIDHVL 452 (484)
T ss_dssp TTTCCGGGCSHHHHHHHHHHHHHHHT
T ss_pred CcccccCCCChHHHHHHHHHHHHHHH
Confidence 7777 499999999999999997
No 21
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.52 E-value=3.2e-13 Score=130.74 Aligned_cols=228 Identities=14% Similarity=0.161 Sum_probs=137.6
Q ss_pred chHHHHHHhcCCC-CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhh----------cCCC
Q 020469 78 MNSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDV----------TGRP 146 (326)
Q Consensus 78 m~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~l----------l~~~ 146 (326)
|++|++.|++.++ .+|+++++|++|.+ .++++|.|.+.+|+.+ .||+||+| +|+..+... +.+.
T Consensus 201 ~~~l~~~l~~~l~~~~i~~~~~V~~I~~-~~~~~v~v~~~~g~~~-~ad~VI~t---~p~~~l~~~~~~~~~~~~~i~f~ 275 (516)
T 1rsg_A 201 YDSVVQRIAQSFPQNWLKLSCEVKSITR-EPSKNVTVNCEDGTVY-NADYVIIT---VPQSVLNLSVQPEKNLRGRIEFQ 275 (516)
T ss_dssp HHHHHHHHHTTSCGGGEETTCCEEEEEE-CTTSCEEEEETTSCEE-EEEEEEEC---CCHHHHHGGGSSCSCSTTCCEEE
T ss_pred HHHHHHHHHHhCCCCEEEECCEEEEEEE-cCCCeEEEEECCCcEE-ECCEEEEC---CCHHHhhhccccccccccceEec
Confidence 9999999999886 57999999999997 2256799998888654 79999999 676655322 1111
Q ss_pred CCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceee-cC-CCcee---------------------------
Q 020469 147 PPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSF-QD-SEVLS--------------------------- 197 (326)
Q Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~-~~-~~~l~--------------------------- 197 (326)
+ .+++...++++.+.|.++.++.+.|++++|..+..++.. .+ ..++.
T Consensus 276 P----~Lp~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (516)
T 1rsg_A 276 P----PLKPVIQDAFDKIHFGALGKVIFEFEECCWSNESSKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSV 351 (516)
T ss_dssp S----CCCHHHHHHTTSSCCCCCEEEEEEESSCCSCCSCSEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CC
T ss_pred C----CCCHHHHHHHHhCCCCcceEEEEEeCCCCCCCCCCcEEEeCCCCccchhhcccCcccchhhhccccccccccccc
Confidence 2 456677888999999999999999999998533233321 11 00110
Q ss_pred --ee----eecCCCCCCCCCCceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHH---HHHHHHHhcCC------CCC--
Q 020469 198 --WA----HCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAE---EMFQEFQGTGL------SIP-- 260 (326)
Q Consensus 198 --w~----~~~sskpgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~l~~~~~~~~~------~~~-- 260 (326)
|. ..+..+++ +...++.......+.. ++.- . ++++++.+ .+++.+..+.+ ..+
T Consensus 352 ~~~~~~~~~~~~~~~~---~~~~L~~~~~g~~a~~-~~~l--~----~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~ 421 (516)
T 1rsg_A 352 TCWSQPLFFVNLSKST---GVASFMMLMQAPLTNH-IESI--R----EDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPI 421 (516)
T ss_dssp CTTSSCEEEEEHHHHT---SCSEEEEEECBTHHHH-HHHT--T----TCHHHHHHHHHHHHHHHHHHTTCCCCEECCC--
T ss_pred ccccCceeEEEeeecC---CCcEEEEEecchHHHH-HHhc--C----CCHHHHHHHHHHHHHHHHhhccccccccCCCCc
Confidence 10 00000111 1224555555554442 2220 0 02344432 34444443211 121
Q ss_pred -------Ccc--eeeeeecCC---CCCC---CCCCCCCCe----ee-ccCCCeEEeeCCC---CCCChhHHHHHHHHHHH
Q 020469 261 -------LPI--FRKAHRWGS---AFPA---ASIAKEERC----LW-DVKRRLAICGDFC---VSPNVEGAILSGLDAAS 317 (326)
Q Consensus 261 -------~p~--~~~~~rW~~---A~p~---~~~~~~~~~----~~-~~~~~l~~aGD~~---~g~~vegA~~SG~~aA~ 317 (326)
.|. ....++|.. +.-. ..+|..... +. .+.++|+|||+.+ ..+.|+||++||.++|+
T Consensus 422 ~~~~~a~~p~~~~~~~~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~g~v~GA~~SG~raA~ 501 (516)
T 1rsg_A 422 ENIANANKPVLRNIIVSNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGAGCAYGAWESGRREAT 501 (516)
T ss_dssp -----CCSCEEEEEEECCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTBTSHHHHHHHHHHHHH
T ss_pred ccccccCCCccceEEEecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCCccchhHHHHHHHHHH
Confidence 144 677899963 1111 112211111 22 3568999999986 35799999999999999
Q ss_pred HHHhhhc
Q 020469 318 KLTEILS 324 (326)
Q Consensus 318 ~l~~~l~ 324 (326)
+|++.+.
T Consensus 502 ~i~~~~~ 508 (516)
T 1rsg_A 502 RISDLLK 508 (516)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 9998764
No 22
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.48 E-value=8.7e-13 Score=124.42 Aligned_cols=211 Identities=13% Similarity=0.145 Sum_probs=133.7
Q ss_pred eCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCCc
Q 020469 74 GVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTF 153 (326)
Q Consensus 74 ~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~~ 153 (326)
..+||..+++.|++.++ +|+++++|++|+. +++++.|.+.+|+.+ .+|+||+| +|++.+..+. ..+ .+
T Consensus 202 ~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~--~~~~v~v~~~~g~~~-~ad~vi~a---~~~~~l~~i~-~~p----~l 269 (431)
T 3k7m_X 202 FSNGSADLVDAMSQEIP-EIRLQTVVTGIDQ--SGDVVNVTVKDGHAF-QAHSVIVA---TPMNTWRRIV-FTP----AL 269 (431)
T ss_dssp ETTCTHHHHHHHHTTCS-CEESSCCEEEEEC--SSSSEEEEETTSCCE-EEEEEEEC---SCGGGGGGSE-EES----CC
T ss_pred cCCcHHHHHHHHHhhCC-ceEeCCEEEEEEE--cCCeEEEEECCCCEE-EeCEEEEe---cCcchHhhee-eCC----CC
Confidence 48999999999999888 8999999999987 677899998888754 89999999 7777765543 222 34
Q ss_pred ChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHHhHhhcCC
Q 020469 154 APDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGL 233 (326)
Q Consensus 154 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (326)
++...+.+..+.|....++.+.|+++++ ++....+.+...+ .++.... .+...++....... ++.
T Consensus 270 ~~~~~~~~~~~~~~~~~kv~~~~~~~~~-----~i~~~~d~~~~~~-~~~~~~~--~~~~~l~~~~~g~~----~~~--- 334 (431)
T 3k7m_X 270 PERRRSVIEEGHGGQGLKILIHVRGAEA-----GIECVGDGIFPTL-YDYCEVS--ESERLLVAFTDSGS----FDP--- 334 (431)
T ss_dssp CHHHHHHHHHCCCCCEEEEEEEEESCCT-----TEEEEBSSSSSEE-EEEEECS--SSEEEEEEEEETTT----CCT---
T ss_pred CHHHHHHHHhCCCcceEEEEEEECCCCc-----CceEcCCCCEEEE-EeCcCCC--CCCeEEEEEecccc----CCC---
Confidence 5555667778889999999999998753 3322222222222 2222110 11123333322211 111
Q ss_pred CCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCC------CCCCCCCCC---CCeeeccCCCeEEeeCCC---C
Q 020469 234 QKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSA------FPAASIAKE---ERCLWDVKRRLAICGDFC---V 301 (326)
Q Consensus 234 ~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A------~p~~~~~~~---~~~~~~~~~~l~~aGD~~---~ 301 (326)
.+.+.+. +.+..+.+.. .|.....++|..- ....++|.. .+.+..+.++|+|||... .
T Consensus 335 -----~~~~~~~----~~l~~~~~~~-~~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~ 404 (431)
T 3k7m_X 335 -----TDIGAVK----DAVLYYLPEV-EVLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEF 404 (431)
T ss_dssp -----TCHHHHH----HHHHHHCTTC-EEEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSS
T ss_pred -----CCHHHHH----HHHHHhcCCC-CccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccC
Confidence 1233333 3344444433 3666778999641 111222221 123446778999999543 3
Q ss_pred CCChhHHHHHHHHHHHHHHh
Q 020469 302 SPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 302 g~~vegA~~SG~~aA~~l~~ 321 (326)
.+.||||++||+++|++|+-
T Consensus 405 ~g~~~GA~~sg~raa~~i~~ 424 (431)
T 3k7m_X 405 PGYIEGALETAECAVNAILH 424 (431)
T ss_dssp TTSHHHHHHHHHHHHHHHHH
T ss_pred CeEehHHHHHHHHHHHHHHh
Confidence 57999999999999999975
No 23
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.48 E-value=5e-14 Score=135.81 Aligned_cols=221 Identities=11% Similarity=0.174 Sum_probs=141.0
Q ss_pred EEeCCCchHHHHHHhcCCC---CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCC
Q 020469 72 YVGVPGMNSICKALCHQPG---VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPP 148 (326)
Q Consensus 72 yv~~~Gm~~l~~~La~~l~---~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~ 148 (326)
|..++||++|+++|++.+. ++|+++++|.+|.. +++. +++.+|+.+ .||+||+| +|.+.+..++.
T Consensus 215 ~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~--~~~~--v~~~~G~~~-~ad~vI~t---~P~~~l~~~l~---- 282 (513)
T 4gde_A 215 FPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNA--NNKT--VTLQDGTTI-GYKKLVST---MAVDFLAEAMN---- 282 (513)
T ss_dssp EESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEET--TTTE--EEETTSCEE-EEEEEEEC---SCHHHHHHHTT----
T ss_pred ecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEc--cCCE--EEEcCCCEE-ECCEEEEC---CCHHHHHHhcC----
Confidence 3447899999999998874 67999999999986 5443 455678765 89999999 89998888864
Q ss_pred CCCCcChHHHHHhccCCCcceeeeeeecCCCCCC--CCCCceeecCCC-ceeeeee----------------------cC
Q 020469 149 LDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS--IPVKGFSFQDSE-VLSWAHC----------------------DS 203 (326)
Q Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~--~p~~g~~~~~~~-~l~w~~~----------------------~s 203 (326)
.+.....+..++|.++.++.+.++..... .+...+.+++.+ ++..+.. ++
T Consensus 283 -----~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~ 357 (513)
T 4gde_A 283 -----DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADG 357 (513)
T ss_dssp -----CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTS
T ss_pred -----chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccC
Confidence 24556677889999999999988765321 122222232211 1111111 11
Q ss_pred CCCCCCCC--CceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCC--CCCcceeeeeecCCCCCCCCC
Q 020469 204 SKPGRSAN--SERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLS--IPLPIFRKAHRWGSAFPAASI 279 (326)
Q Consensus 204 skpgr~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~--~~~p~~~~~~rW~~A~p~~~~ 279 (326)
..|.+.+. ...+........ ..... .+++++.+..++++.++++. .+.+....++||.+|.|++..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~ 427 (513)
T 4gde_A 358 SRPQSTEAKEGPYWSIMLEVSE-SSMKP---------VNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTL 427 (513)
T ss_dssp CCCSCCSEECCCEEEEEEEEEE-BTTBC---------CCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBT
T ss_pred CCcccccCCcceEEEEEecccc-hhccC---------CCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCH
Confidence 11222210 111111111000 00111 13466777778888776442 234678889999999999988
Q ss_pred CCCC------CeeeccCCCeEEee---CCCC-CCChhHHHHHHHHHHHHHHh
Q 020469 280 AKEE------RCLWDVKRRLAICG---DFCV-SPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 280 ~~~~------~~~~~~~~~l~~aG---D~~~-g~~vegA~~SG~~aA~~l~~ 321 (326)
++.. ..+ . ..+|++|| .|-+ .+.++.|+.||+.||+.|+.
T Consensus 428 ~~~~~~~~~~~~l-~-~~~l~~~GR~g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 428 EREGTLTQILPKL-Q-DKDIWSRGRFGSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp THHHHHHHHHHHH-H-HTTEEECSTTTTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH-h-hcCcEEecCCcccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 7521 112 2 25899999 4544 35899999999999999975
No 24
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.43 E-value=9.2e-13 Score=126.74 Aligned_cols=236 Identities=12% Similarity=0.113 Sum_probs=113.1
Q ss_pred eEEeCCCchHHHHHHhcC---CCCeeEcceeEeeEEeecCCCCeE-EEccCCCccccccEEEeccCCCCCcchhh-hcCC
Q 020469 71 KYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDKNVVSPRFRD-VTGR 145 (326)
Q Consensus 71 ~yv~~~Gm~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~~~~pap~~~~-ll~~ 145 (326)
.|..++||++|+++|++. .|.+|+++++|++|.. +++++. |.++||+.+ .+|+||++ ++++.+.. |+..
T Consensus 213 ~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~--~~~~~~gV~~~~g~~~-~ad~VV~~---a~~~~~~~~Ll~~ 286 (501)
T 4dgk_A 213 VWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMET--TGNKIEAVHLEDGRRF-LTQAVASN---ADVVHTYRDLLSQ 286 (501)
T ss_dssp EEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTSCEE-ECSCEEEC---CC-----------
T ss_pred eEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEe--eCCeEEEEEecCCcEE-EcCEEEEC---CCHHHHHHHhccc
Confidence 356789999999999874 4789999999999997 566665 778888875 79999999 66666544 4431
Q ss_pred CCCCCCCcChHHHHHhccCCCc-ceeeeeeecCCCCCCCCCCceeecCC----------------CceeeeeecCCC-CC
Q 020469 146 PPPLDLTFAPDLAVKLEEIPVN-PCFALMLAFSEPLSSIPVKGFSFQDS----------------EVLSWAHCDSSK-PG 207 (326)
Q Consensus 146 ~~~~~~~~~~~~~~~l~~~~~~-~~~~v~l~~~~~~~~~p~~g~~~~~~----------------~~l~w~~~~ssk-pg 207 (326)
. .......+.++..+++ ++++++++++.+...++...+++..+ .+.-++...+.. |.
T Consensus 287 ~-----~~~~~~~~~~~~~~~~~s~~~~~~~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~ 361 (501)
T 4dgk_A 287 H-----PAAVKQSNKLQTKRMSNSLFVLYFGLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSS 361 (501)
T ss_dssp ---------------------CCEEEEEEEEESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGG
T ss_pred c-----ccchhhhhhhhccccCCceeEEEecccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCC
Confidence 1 1222334445556554 56677888887654333222222110 112233333322 44
Q ss_pred CCCCC-ceEEEEe-CHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHh-cCCCCCC-cceeee---eecCCCCCCC---
Q 020469 208 RSANS-ERWVLHS-TADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQG-TGLSIPL-PIFRKA---HRWGSAFPAA--- 277 (326)
Q Consensus 208 r~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~-~~~~~~~-p~~~~~---~rW~~A~p~~--- 277 (326)
+.+.+ ..+.+.. .+.......+ -++..+++.+++++.+.+ +.+++.. .++..+ ..|..-....
T Consensus 362 ~ap~G~~~~~~~~~~p~~~~~~~~-------~~~~~~~~~~~vl~~l~~~~~P~~~~~i~~~~~~tP~~~~~~~~~~~G~ 434 (501)
T 4dgk_A 362 LAPEGCGSYYVLAPVPHLGTANLD-------WTVEGPKLRDRIFAYLEQHYMPGLRSQLVTHRMFTPFDFRDQLNAYHGS 434 (501)
T ss_dssp GSSTTCEEEEEEEEECCTTTSCCC-------HHHHHHHHHHHHHHHHHHHTCTTHHHHEEEEEEECTTTTC---------
T ss_pred cCCCCCceEEEEEecCcccccccc-------HHHHHHHHHHHHHHHHHHhhCCChHHceEEEEECCHHHHHHHcCCCCcc
Confidence 44322 2222222 1110000000 011345667777777764 3232111 111111 1121100000
Q ss_pred --CCCC--C-----CCe-eeccCCCeEEeeCCCC-CCChhHHHHHHHHHHHHHHhhhc
Q 020469 278 --SIAK--E-----ERC-LWDVKRRLAICGDFCV-SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 278 --~~~~--~-----~~~-~~~~~~~l~~aGD~~~-g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...+ . .+. ...+-++|++||||.. |++|+||+.||+.+|++|++.|.
T Consensus 435 ~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~pG~Gv~ga~~SG~~aA~~il~dL~ 492 (501)
T 4dgk_A 435 AFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTHPGAGIPGVIGSAKATAGLMLEDLI 492 (501)
T ss_dssp ---------------------CCTTEEECCCH------HHHHHHHHHHHHHHHHHHHC
T ss_pred ccChhcchhhccccCCCCCCCCCCCEEEECCCCCCcccHHHHHHHHHHHHHHHHHHhc
Confidence 0000 0 011 1234579999999986 67899999999999999998774
No 25
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.34 E-value=1e-12 Score=123.76 Aligned_cols=216 Identities=12% Similarity=0.093 Sum_probs=126.7
Q ss_pred eEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCC
Q 020469 71 KYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLD 150 (326)
Q Consensus 71 ~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~ 150 (326)
.|...+||+.++++|++.++.+|+++++|++|.. ++++|.|.+.+|+ + .||+||+| +|++++.+++.
T Consensus 198 ~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~--~~~~v~v~~~~g~-~-~ad~Vv~a---~~~~~~~~~l~------ 264 (424)
T 2b9w_A 198 LWTWADGTQAMFEHLNATLEHPAERNVDITRITR--EDGKVHIHTTDWD-R-ESDVLVLT---VPLEKFLDYSD------ 264 (424)
T ss_dssp CBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEEC--CTTCEEEEESSCE-E-EESEEEEC---SCHHHHTTSBC------
T ss_pred eEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEE--ECCEEEEEECCCe-E-EcCEEEEC---CCHHHHhhccC------
Confidence 4566889999999999998778999999999987 6678999888775 3 79999999 78887766542
Q ss_pred CCcChHHHHHhccCCCcceeeeeeecCCCCCCCCCCceeecCC---Cceee-eeecCCCCCCCCCCceEEEEeCHHHHHH
Q 020469 151 LTFAPDLAVKLEEIPVNPCFALMLAFSEPLSSIPVKGFSFQDS---EVLSW-AHCDSSKPGRSANSERWVLHSTADYART 226 (326)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~p~~g~~~~~~---~~l~w-~~~~sskpgr~~~~~~~~~~~~~~~~~~ 226 (326)
..+...+.+.++.|.+..+... +....+ .+.+ +++.. ....| +.++...+.. + ...++....... .
T Consensus 265 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~-~~~~~~~~~~~g~~~~~~~~~~~~-~-~~~l~~~~~~~~-~- 334 (424)
T 2b9w_A 265 --ADDDEREYFSKIIHQQYMVDAC-LVKEYP--TISG-YVPDNMRPERLGHVMVYYHRWADD-P-HQIITTYLLRNH-P- 334 (424)
T ss_dssp --CCHHHHHHHTTCEEEEEEEEEE-EESSCC--SSEE-ECGGGGSGGGTTSCCEEEECCTTC-T-TSCEEEEEECCB-T-
T ss_pred --CCHHHHHHHhcCCcceeEEEEE-EeccCC--cccc-cccCCCCCcCCCcceEEeeecCCC-C-ceEEEEEeccCC-C-
Confidence 1244455677777766432222 222221 1222 23221 01112 2222222321 1 112222221111 1
Q ss_pred hHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcceeeeeecCCCCCC-----CCCCCCCCe-eeccCCCeEEeeCCC
Q 020469 227 VIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPIFRKAHRWGSAFPA-----ASIAKEERC-LWDVKRRLAICGDFC 300 (326)
Q Consensus 227 ~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~~~~~~rW~~A~p~-----~~~~~~~~~-~~~~~~~l~~aGD~~ 300 (326)
.+.. .+.+++.+.+++.+..+++. .+.......|.+ .|. +..|+.... ......+|++||+|+
T Consensus 335 ~~~~--------~~~~~~~~~v~~~l~~l~~~--~~~~~~~~~w~~-~p~~~~~~~~~G~~~~~~~~~~~~~l~~aG~~~ 403 (424)
T 2b9w_A 335 DYAD--------KTQEECRQMVLDDMETFGHP--VEKIIEEQTWYY-FPHVSSEDYKAGWYEKVEGMQGRRNTFYAGEIM 403 (424)
T ss_dssp TBCC--------CCHHHHHHHHHHHHHHTTCC--EEEEEEEEEEEE-EEECCHHHHHTTHHHHHHHTTTGGGEEECSGGG
T ss_pred cccc--------cChHHHHHHHHHHHHHcCCc--ccccccccceee-eeccCHHHHhccHHHHHHHHhCCCCceEecccc
Confidence 1111 13567777778888775432 222233456653 332 111110000 012236899999999
Q ss_pred CCCChhHHHHHHHHHHHHHH
Q 020469 301 VSPNVEGAILSGLDAASKLT 320 (326)
Q Consensus 301 ~g~~vegA~~SG~~aA~~l~ 320 (326)
..+.+|+|++||+++|++|+
T Consensus 404 ~~g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 404 SFGNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp SCSSHHHHHHHHHHHHHHHT
T ss_pred ccccHHHHHHHHHHHHHHhc
Confidence 98999999999999999875
No 26
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.22 E-value=3.9e-11 Score=119.07 Aligned_cols=240 Identities=15% Similarity=0.106 Sum_probs=138.9
Q ss_pred ceEEeCCCchHHHHHHhcCC--CCeeEcceeEe--eEEeecCCCC-------eEE-EccCCC--ccccccEEEeccCCCC
Q 020469 70 KKYVGVPGMNSICKALCHQP--GVESKFGVGVG--RFEWLEDKNL-------WSV-SGLDGQ--SLGQFNGVVASDKNVV 135 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l--~~~i~~~~~V~--~i~~~~~~~~-------w~l-~~~~g~--~~~~~d~VVla~~~~p 135 (326)
..|...+||+.|+++|++.+ +..|+++++|+ +|.+ ++++ +.| ...+|+ .+ .||+||+| +|
T Consensus 338 ~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~--~~~g~~~~~~~V~V~~~~~G~~~~~-~aD~VIvT---vP 411 (721)
T 3ayj_A 338 EYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVAN--ACHSGTASARAQLLSYDSHNAVHSE-AYDFVILA---VP 411 (721)
T ss_dssp EECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEE--EEECSSSSCCEEEEEEETTCCEEEE-EESEEEEC---SC
T ss_pred ceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEE--CCCCCccccceEEEEEecCCceEEE-EcCEEEEC---CC
Confidence 46777899999999999987 56799999999 9987 3233 777 445564 33 79999999 77
Q ss_pred Ccchhhh-----cC----------------------CCCCCCCCc-C-------hHHHHHhccCCCcceeeeeeec----
Q 020469 136 SPRFRDV-----TG----------------------RPPPLDLTF-A-------PDLAVKLEEIPVNPCFALMLAF---- 176 (326)
Q Consensus 136 ap~~~~l-----l~----------------------~~~~~~~~~-~-------~~~~~~l~~~~~~~~~~v~l~~---- 176 (326)
.+.+..+ +. .++ .+ . +...++++.++|.+..++.+.|
T Consensus 412 ~~~L~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pp----lLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~ 487 (721)
T 3ayj_A 412 HDQLTPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPP----LLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAA 487 (721)
T ss_dssp HHHHHHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCS----SCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGG
T ss_pred HHHHhhccccccccccccccccccccccccccccccCCc----ccCCcccccccHHHHHHHHhcCcccceEEEEEEcccc
Confidence 7766321 11 111 13 3 4677889999999999999999
Q ss_pred -CCCCCCCCCCc----eeecCCCceeeeee-------cCCCCCCCCCCceEEEEeCHHHHHHhHhh---cCCCCCch-hh
Q 020469 177 -SEPLSSIPVKG----FSFQDSEVLSWAHC-------DSSKPGRSANSERWVLHSTADYARTVIAQ---TGLQKPSE-AT 240 (326)
Q Consensus 177 -~~~~~~~p~~g----~~~~~~~~l~w~~~-------~sskpgr~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~ 240 (326)
++++|... .| ..+.+. ++..+.. +...++ + +..+......+-+.+.+.. ..+...+. ..
T Consensus 488 ~~~~fW~~~-~g~~i~~s~TD~-~~r~~~~~p~p~~~d~~~~~--~-gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~ 562 (721)
T 3ayj_A 488 LDQPWVPQW-RGEPIKAVVSDS-GLAASYVVPSPIVEDGQAPE--Y-SSLLASYTWEDDSTRLRHDFGLYPQNPATETGT 562 (721)
T ss_dssp GGSTTSCEE-TTEECCEEEETT-TTEEEEEEECSCC----CCS--E-EEEEEEEEETHHHHHHHTTCCSSSEESSSSSCC
T ss_pred CCCCccccc-CCCCceeeecCC-CcceEEEeccCcccccCCCC--C-cEEEEEEeCccchhhhhccccccCCChHHhhhh
Confidence 88988521 22 233343 3332221 111111 1 1111112222223333100 11110000 01
Q ss_pred HHHHHHHHHHHHH--hcCCCCC--------------CcceeeeeecCCCC-----CCCCCCCC------CCe-----eec
Q 020469 241 LKKVAEEMFQEFQ--GTGLSIP--------------LPIFRKAHRWGSAF-----PAASIAKE------ERC-----LWD 288 (326)
Q Consensus 241 ~~~v~~~l~~~~~--~~~~~~~--------------~p~~~~~~rW~~A~-----p~~~~~~~------~~~-----~~~ 288 (326)
.+.+.+.+++.+. .+.+... .+.....+.|..-- ....+|.. ..+ +..
T Consensus 563 ~~~~~~~~l~~la~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~ 642 (721)
T 3ayj_A 563 ADGMYRTMVNRAYRYVKYAGASNAQPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAAS 642 (721)
T ss_dssp CHHHHHHHHHHTCCEECCTTCSSCEECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTT
T ss_pred hhHHHHHHHHHHhhhccCccccccccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccC
Confidence 2344666677776 4443222 02334688996422 11111110 001 113
Q ss_pred cCCCeEEeeCCC--CCCChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDFC--VSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~~--~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
+.++|+||||.+ .++-+|||+.||.++|..|+..+.
T Consensus 643 ~~gri~fAGe~~S~~~GWieGAl~Sa~~Aa~~i~~~~~ 680 (721)
T 3ayj_A 643 LDNRFFIASDSYSHLGGWLEGAFMSALNAVAGLIVRAN 680 (721)
T ss_dssp TCCCEEECSGGGSSCTTSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhhccCCceehHHHHHHHHHHHHHHHHhc
Confidence 468999999986 467899999999999999988764
No 27
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.50 E-value=2e-07 Score=86.56 Aligned_cols=67 Identities=7% Similarity=0.035 Sum_probs=55.5
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEe-eEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCC
Q 020469 73 VGVPGMNSICKALCHQPGVESKFGVGVG-RFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDL 151 (326)
Q Consensus 73 v~~~Gm~~l~~~La~~l~~~i~~~~~V~-~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~ 151 (326)
..++|+++|+++|++..+.+|+++++|. +|.. .||+||+| +|++++..+
T Consensus 193 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~~i~~------------------~~d~VI~a---~p~~~~~~~--------- 242 (384)
T 2bi7_A 193 MPKCGYTQMIKSILNHENIKVDLQREFIVEERT------------------HYDHVFYS---GPLDAFYGY--------- 242 (384)
T ss_dssp EETTHHHHHHHHHHCSTTEEEEESCCCCGGGGG------------------GSSEEEEC---SCHHHHTTT---------
T ss_pred EECcCHHHHHHHHHhcCCCEEEECCeeehhhhc------------------cCCEEEEc---CCHHHHHHh---------
Confidence 6789999999999998778899999999 7752 28999999 788876543
Q ss_pred CcChHHHHHhccCCCcceeeeeeecC
Q 020469 152 TFAPDLAVKLEEIPVNPCFALMLAFS 177 (326)
Q Consensus 152 ~~~~~~~~~l~~~~~~~~~~v~l~~~ 177 (326)
.+..++|.++..+.+.++
T Consensus 243 --------~lg~l~y~s~~~v~~~~d 260 (384)
T 2bi7_A 243 --------QYGRLGYRTLDFKKFTYQ 260 (384)
T ss_dssp --------TTCCCCEEEEEEEEEEEE
T ss_pred --------hcCCCCcceEEEEEEEeC
Confidence 145788999988888887
No 28
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.50 E-value=4.6e-08 Score=91.42 Aligned_cols=75 Identities=8% Similarity=-0.052 Sum_probs=58.5
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCC
Q 020469 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (326)
Q Consensus 73 v~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~ 152 (326)
..++||++|+++|++.++.+|+++++|.+|.. . | + .+..||+||+| +|++++.++
T Consensus 199 ~p~gG~~~l~~~l~~~~g~~I~l~~~V~~I~~--~---v-----~--~~~~aD~VI~t---~p~~~l~~~---------- 253 (399)
T 1v0j_A 199 LPTDGYTAWLQNMAADHRIEVRLNTDWFDVRG--Q---L-----R--PGSPAAPVVYT---GPLDRYFDY---------- 253 (399)
T ss_dssp CBTTHHHHHHHHHTCSTTEEEECSCCHHHHHH--H---H-----T--TTSTTCCEEEC---SCHHHHTTT----------
T ss_pred cccccHHHHHHHHHhcCCeEEEECCchhhhhh--h---h-----h--hcccCCEEEEC---CcHHHHHhh----------
Confidence 66899999999999988888999999999974 2 3 1 22269999999 777765443
Q ss_pred cChHHHHHhccCCCcceeeeeeecCCC
Q 020469 153 FAPDLAVKLEEIPVNPCFALMLAFSEP 179 (326)
Q Consensus 153 ~~~~~~~~l~~~~~~~~~~v~l~~~~~ 179 (326)
.+..++|.++..+.+.++.+
T Consensus 254 -------~l~~l~y~s~~~~~~~~~~~ 273 (399)
T 1v0j_A 254 -------AEGRLGWRTLDFEVEVLPIG 273 (399)
T ss_dssp -------TTCCCCEEEEEEEEEEESSS
T ss_pred -------hhCCCCcceEEEEEEEEccc
Confidence 24578899888888888764
No 29
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.37 E-value=1.1e-06 Score=81.07 Aligned_cols=71 Identities=11% Similarity=0.142 Sum_probs=56.6
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCC
Q 020469 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (326)
Q Consensus 73 v~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~ 152 (326)
..++||++|+++|++ +++|+++++|.+|.. .| . ..||+||+| +|++++..+
T Consensus 189 ~p~gG~~~l~~~l~~--g~~i~l~~~V~~i~~-----~v--------~-~~~D~VV~a---~p~~~~~~~---------- 239 (367)
T 1i8t_A 189 IPVGGYTKLIEKMLE--GVDVKLGIDFLKDKD-----SL--------A-SKAHRIIYT---GPIDQYFDY---------- 239 (367)
T ss_dssp CBTTCHHHHHHHHHT--TSEEECSCCGGGSHH-----HH--------H-TTEEEEEEC---SCHHHHTTT----------
T ss_pred ccCCCHHHHHHHHhc--CCEEEeCCceeeech-----hh--------h-ccCCEEEEe---ccHHHHHHH----------
Confidence 668999999999998 468999999999863 13 1 269999999 777765432
Q ss_pred cChHHHHHhccCCCcceeeeeeecCCC
Q 020469 153 FAPDLAVKLEEIPVNPCFALMLAFSEP 179 (326)
Q Consensus 153 ~~~~~~~~l~~~~~~~~~~v~l~~~~~ 179 (326)
.+.+++|.++..+.+.++.+
T Consensus 240 -------~l~~l~y~s~~~v~~~~d~~ 259 (367)
T 1i8t_A 240 -------RFGALEYRSLKFETERHEFP 259 (367)
T ss_dssp -------TTCCCCEEEEEEEEEEESSS
T ss_pred -------hhCCCCCceEEEEEEEeccc
Confidence 24578899999999999876
No 30
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.36 E-value=4.2e-07 Score=75.33 Aligned_cols=132 Identities=11% Similarity=-0.004 Sum_probs=71.1
Q ss_pred CCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHHHHHHHHhcCCCCCCcc
Q 020469 184 PVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEEMFQEFQGTGLSIPLPI 263 (326)
Q Consensus 184 p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~~~~~~~~p~ 263 (326)
++.|-....+.++.++.+.+....-......++.......+...... +.++..+.+.++|.+.|. ... .+.
T Consensus 8 gi~Gg~~~td~pi~~i~d~S~~~~~~g~~~~L~~~~~g~~A~~~~~l-----~~~e~~~~~l~~L~~~~g---~~~-~~~ 78 (181)
T 2e1m_C 8 NAYGGGSTTDNPNRFMYYPSHPVPGTQGGVVLAAYSWSDDAARWDSF-----DDAERYGYALENLQSVHG---RRI-EVF 78 (181)
T ss_dssp CCCSCEEEESSTTBEEECCSSCCTTCSCEEEEEEEEEHHHHHHHTTS-----CTTTTHHHHHHHHHHHHC---GGG-GGT
T ss_pred CccceeEecCCCeEEEEECCCCcCCCCCCEEEEEEcCChHHHHHHcC-----CHHHHHHHHHHHHHHHhC---CCc-Hhh
Confidence 34443333445787776554432101111234444445555443222 112244445444444442 222 333
Q ss_pred -ee--eeeecCCC---CC---CCCCCCC---CCeeeccCCCeEEeeCCCC--CCChhHHHHHHHHHHHHHHhhhc
Q 020469 264 -FR--KAHRWGSA---FP---AASIAKE---ERCLWDVKRRLAICGDFCV--SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 264 -~~--~~~rW~~A---~p---~~~~~~~---~~~~~~~~~~l~~aGD~~~--g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
.. ..++|..- .- ..+++.. .+.+..+.++|+|||+++. .+.||||++||.++|++|+..+.
T Consensus 79 ~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ts~~~g~~eGAl~SG~raA~~i~~~l~ 153 (181)
T 2e1m_C 79 YTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEHVSLKHAWIEGAVETAVRAAIAVNEAPV 153 (181)
T ss_dssp EEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGGGTTSTTSHHHHHHHHHHHHHHHHTCCC
T ss_pred ccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHHHcCCccCHHHHHHHHHHHHHHHHHHhc
Confidence 45 78999642 11 1112210 0123356789999999876 78999999999999999988654
No 31
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.93 E-value=4.1e-05 Score=72.45 Aligned_cols=56 Identities=11% Similarity=0.153 Sum_probs=42.7
Q ss_pred EeCCCchHHHHHHhcCC---CCeeEcceeEeeEEeecCCCCe-EEEccCCCccccccEEEec
Q 020469 73 VGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVAS 130 (326)
Q Consensus 73 v~~~Gm~~l~~~La~~l---~~~i~~~~~V~~i~~~~~~~~w-~l~~~~g~~~~~~d~VVla 130 (326)
...+||..|+++|++.+ |.+|+++++|++|....+++++ .|.+ +|+.+ .+|+||+|
T Consensus 236 ~p~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~-~ad~VV~a 295 (453)
T 2bcg_G 236 YPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTF-KAPLVIAD 295 (453)
T ss_dssp EETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEE-ECSCEEEC
T ss_pred eeCCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEE-ECCEEEEC
Confidence 77899999999998654 7889999999999872104443 4555 46554 79999999
No 32
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.67 E-value=0.00021 Score=67.10 Aligned_cols=58 Identities=7% Similarity=0.073 Sum_probs=44.9
Q ss_pred ceEEeCCCchHHHHHHhcCC---CCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEec
Q 020469 70 KKYVGVPGMNSICKALCHQP---GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~La~~l---~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla 130 (326)
+.+...+||..|+++|++.+ |++|+++++|++|.. +++++.....+|+.+ .+|+||+|
T Consensus 225 ~~~~p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~--~~~~v~~v~~~g~~~-~ad~VV~a 285 (433)
T 1d5t_A 225 PYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIM--ENGKVVGVKSEGEVA-RCKQLICD 285 (433)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEE--ETTEEEEEEETTEEE-ECSEEEEC
T ss_pred cEEEeCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEE--eCCEEEEEEECCeEE-ECCEEEEC
Confidence 35678899999999997643 678999999999987 455655333466654 79999999
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.33 E-value=0.027 Score=51.17 Aligned_cols=182 Identities=14% Similarity=0.069 Sum_probs=94.6
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCCcChHHHHHhc-cCCCc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLE-EIPVN 167 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~~~~~~~~~l~-~~~~~ 167 (326)
.+++|+++++|.+|.. ++++|.|.+.+| .+ .+|.||+|+ ... ...+...+. .+++.
T Consensus 177 ~g~~i~~~~~v~~i~~--~~~~~~v~~~~g-~~-~a~~vV~A~---G~~----------------s~~l~~~~~~~~~~~ 233 (382)
T 1ryi_A 177 LGAEIFEHTPVLHVER--DGEALFIKTPSG-DV-WANHVVVAS---GVW----------------SGMFFKQLGLNNAFL 233 (382)
T ss_dssp TTCEEETTCCCCEEEC--SSSSEEEEETTE-EE-EEEEEEECC---GGG----------------THHHHHHTTCCCCCE
T ss_pred CCCEEEcCCcEEEEEE--ECCEEEEEcCCc-eE-EcCEEEECC---Chh----------------HHHHHHhcCCCCcee
Confidence 4788999999999987 667888887777 44 799999993 211 111222111 23455
Q ss_pred ceeeeeeecCCCCCCCCCCceeecCCCceeeeeecCCCCCCCCCCceEEEEeCHHHHHHhHhhcCCCCCchhhHHHHHHH
Q 020469 168 PCFALMLAFSEPLSSIPVKGFSFQDSEVLSWAHCDSSKPGRSANSERWVLHSTADYARTVIAQTGLQKPSEATLKKVAEE 247 (326)
Q Consensus 168 ~~~~v~l~~~~~~~~~p~~g~~~~~~~~l~w~~~~sskpgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 247 (326)
|+...++.++.+.. .....++.+ ..|+. |... + .+++-.+.++.. .+ .. ..++..+.
T Consensus 234 ~~~g~~~~~~~~~~--~~~~~~~~~---~~~~~-----p~~~--g-~~~vG~~~~~~~--~~----~~----~~~~~~~~ 290 (382)
T 1ryi_A 234 PVKGECLSVWNDDI--PLTKTLYHD---HCYIV-----PRKS--G-RLVVGATMKPGD--WS----ET----PDLGGLES 290 (382)
T ss_dssp EEEEEEEEEECCSS--CCCSEEEET---TEEEE-----ECTT--S-EEEEECCCEETC--CC----CS----CCHHHHHH
T ss_pred ccceEEEEECCCCC--CccceEEcC---CEEEE-----EcCC--C-eEEEeecccccC--CC----CC----CCHHHHHH
Confidence 55555655554321 112222211 12332 1111 1 344444322110 00 01 11233455
Q ss_pred HHHHHHhcCCCCCCcceeeeeecCCCCCCCCCCCCCCeeec-c-CCCeEEeeCCCCCCChhHHHHHHHHHHHHHHh
Q 020469 248 MFQEFQGTGLSIPLPIFRKAHRWGSAFPAASIAKEERCLWD-V-KRRLAICGDFCVSPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 248 l~~~~~~~~~~~~~p~~~~~~rW~~A~p~~~~~~~~~~~~~-~-~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~ 321 (326)
+++.+.++.+.+... ...+.|....|..+.+ .+.+-. + ..+|++|+- +.|.++.-|..+|+.+|+.|..
T Consensus 291 l~~~~~~~~p~l~~~--~~~~~w~g~~~~t~d~--~p~ig~~~~~~~l~~~~G-~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 291 VMKKAKTMLPAIQNM--KVDRFWAGLRPGTKDG--KPYIGRHPEDSRILFAAG-HFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp HHHHHHHHCGGGGGS--EEEEEEEEEEEECSSS--CCEEEEETTEEEEEEEEC-CSSCTTTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCcCCC--ceeeEEEEecccCCCC--CcEeccCCCcCCEEEEEc-CCcchHHHhHHHHHHHHHHHhC
Confidence 555555544322211 2346675444443322 233322 1 357887755 5677899999999999999865
No 34
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.02 E-value=0.78 Score=44.98 Aligned_cols=60 Identities=12% Similarity=0.028 Sum_probs=44.6
Q ss_pred ceEEeCCCchHHHHHH---hcCCCCeeEcceeEeeEEeecCCCCe-EEEccCCCccccccEEEec
Q 020469 70 KKYVGVPGMNSICKAL---CHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVAS 130 (326)
Q Consensus 70 ~~yv~~~Gm~~l~~~L---a~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~g~~~~~~d~VVla 130 (326)
..+...+||++|+++| ++..|.+|+++++|.+|....+.+++ -+...+|+.+ .+|+||+.
T Consensus 369 g~~yp~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i-~A~~VVs~ 432 (650)
T 1vg0_A 369 PFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRI-ISKHFIIE 432 (650)
T ss_dssp SEEEETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEE-ECSEEEEE
T ss_pred ceEEeCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEE-EcCEEEEC
Confidence 5667789999999988 44568899999999999862111443 3444668765 79999986
No 35
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=95.90 E-value=0.088 Score=50.41 Aligned_cols=40 Identities=15% Similarity=0.081 Sum_probs=31.6
Q ss_pred CCCeeEcceeEeeEEeecCCC----CeEEEccCC---CccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKN----LWSVSGLDG---QSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~----~w~l~~~~g---~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|+. +++ +|.+...++ .. ..+|.||.|+
T Consensus 133 ~gv~i~~~~~v~~i~~--~~~~~~~~v~v~~~~~~~~~~-i~a~~vV~Ad 179 (535)
T 3ihg_A 133 HGGAIRFGTRLLSFRQ--HDDDAGAGVTARLAGPDGEYD-LRAGYLVGAD 179 (535)
T ss_dssp TTCEEESSCEEEEEEE--ECGGGCSEEEEEEEETTEEEE-EEEEEEEECC
T ss_pred CCCEEEeCCEEEEEEE--CCCCccccEEEEEEcCCCeEE-EEeCEEEECC
Confidence 4789999999999997 555 788876655 33 3799999995
No 36
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.40 E-value=0.38 Score=45.64 Aligned_cols=43 Identities=21% Similarity=0.009 Sum_probs=33.9
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCC---ccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ---SLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~---~~~~~d~VVla~ 131 (326)
+...+++|+++++|.+|+. ++++|.++..+|+ . ..+|.||.|+
T Consensus 117 ~~~~gv~v~~~~~v~~i~~--~~~~v~v~~~~~~g~~~-~~a~~vVgAD 162 (499)
T 2qa2_A 117 ALGRGAELLRGHTVRALTD--EGDHVVVEVEGPDGPRS-LTTRYVVGCD 162 (499)
T ss_dssp HHHTTCEEEESCEEEEEEE--CSSCEEEEEECSSCEEE-EEEEEEEECC
T ss_pred HHhCCCEEEcCCEEEEEEE--eCCEEEEEEEcCCCcEE-EEeCEEEEcc
Confidence 3345788999999999997 6678888876663 3 3799999995
No 37
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=95.27 E-value=0.4 Score=45.55 Aligned_cols=43 Identities=16% Similarity=0.017 Sum_probs=33.3
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCC---ccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ---SLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~---~~~~~d~VVla~ 131 (326)
++..+++|+++++|.+|+. ++++|.++..+|. . ..+|.||.|+
T Consensus 116 ~~~~gv~v~~~~~v~~i~~--~~~~v~v~~~~~~g~~~-~~a~~vVgAD 161 (500)
T 2qa1_A 116 ATGLGADIRRGHEVLSLTD--DGAGVTVEVRGPEGKHT-LRAAYLVGCD 161 (500)
T ss_dssp HHHTTCEEEETCEEEEEEE--ETTEEEEEEEETTEEEE-EEESEEEECC
T ss_pred HHHCCCEEECCcEEEEEEE--cCCeEEEEEEcCCCCEE-EEeCEEEECC
Confidence 3345788999999999987 5677888776653 3 3799999995
No 38
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=95.17 E-value=0.026 Score=53.41 Aligned_cols=62 Identities=15% Similarity=0.204 Sum_probs=45.9
Q ss_pred CceEEeCCCchHHHHHHhcC---CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 69 NKKYVGVPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 69 ~~~yv~~~Gm~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+-+...+||..|++.|++. .|++|+++++|.+|..+.++..+.|.+.+|+.+ .+|+||++.
T Consensus 246 s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i-~Ad~VI~a~ 310 (475)
T 3p1w_A 246 SPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIA-YCDKVICDP 310 (475)
T ss_dssp CSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEE-EEEEEEECG
T ss_pred CceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEE-ECCEEEECC
Confidence 34556789999999988654 478899999999998622333467888888654 799999993
No 39
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.10 E-value=0.14 Score=47.06 Aligned_cols=38 Identities=32% Similarity=0.240 Sum_probs=32.8
Q ss_pred CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 91 VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 91 ~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++|+++++|++|+. ++++|.|.+.+|+.+ .+|.||.|+
T Consensus 140 ~~i~~~~~v~~i~~--~~~~v~v~~~~g~~~-~a~~vV~Ad 177 (407)
T 3rp8_A 140 DSVQFGKRVTRCEE--DADGVTVWFTDGSSA-SGDLLIAAD 177 (407)
T ss_dssp GGEEESCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECC
T ss_pred CEEEECCEEEEEEe--cCCcEEEEEcCCCEE-eeCEEEECC
Confidence 67999999999997 667899999888754 799999994
No 40
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=95.06 E-value=0.033 Score=51.53 Aligned_cols=71 Identities=8% Similarity=0.143 Sum_probs=54.6
Q ss_pred EeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCcchhhhcCCCCCCCCC
Q 020469 73 VGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRFRDVTGRPPPLDLT 152 (326)
Q Consensus 73 v~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~~~ll~~~~~~~~~ 152 (326)
...+|+++|.+.|++..+++|+++++|.++ +... .+|.||.| +|.+.+..
T Consensus 217 ~P~gGy~~l~e~l~~~~g~~V~l~~~v~~~---------------~~~~-~~d~vI~T---~P~d~~~~----------- 266 (397)
T 3hdq_A 217 MPLHGYTRMFQNMLSSPNIKVMLNTDYREI---------------ADFI-PFQHMIYT---GPVDAFFD----------- 266 (397)
T ss_dssp EETTCHHHHHHHHTCSTTEEEEESCCGGGT---------------TTTS-CEEEEEEC---SCHHHHTT-----------
T ss_pred ccCCCHHHHHHHHHhccCCEEEECCeEEec---------------cccc-cCCEEEEc---CCHHHHHH-----------
Confidence 578999999999999888899999998743 1122 68999999 66654321
Q ss_pred cChHHHHHhccCCCcceeeeeeecCCC
Q 020469 153 FAPDLAVKLEEIPVNPCFALMLAFSEP 179 (326)
Q Consensus 153 ~~~~~~~~l~~~~~~~~~~v~l~~~~~ 179 (326)
..+..++|.+...+.+.++.+
T Consensus 267 ------~~~g~L~yrsl~~~~~~~~~~ 287 (397)
T 3hdq_A 267 ------FCYGKLPYRSLEFRHETHDTE 287 (397)
T ss_dssp ------TTTCCCCEEEEEEEEEEESSS
T ss_pred ------HhcCCCCCceEEEEEEEeccc
Confidence 124578899999999999865
No 41
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.72 E-value=0.016 Score=44.65 Aligned_cols=52 Identities=13% Similarity=0.109 Sum_probs=40.8
Q ss_pred cccEEEeccCCCCCcchhhhcCCCCCCCCCcChHHHHHhccCCCcceeeeeeecCCCCCC
Q 020469 123 QFNGVVASDKNVVSPRFRDVTGRPPPLDLTFAPDLAVKLEEIPVNPCFALMLAFSEPLSS 182 (326)
Q Consensus 123 ~~d~VVla~~~~pap~~~~ll~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~ 182 (326)
.+|+||+| +|...+.. +.+.| .+++...++++.+.|.+..++.+.|++++|.
T Consensus 7 ~Ad~VIvT---vP~~vL~~-I~F~P----~LP~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~ 58 (130)
T 2e1m_B 7 TGDLAIVT---IPFSSLRF-VKVTP----PFSYKKRRAVIETHYDQATKVLLEFSRRWWE 58 (130)
T ss_dssp EESEEEEC---SCHHHHTT-SEEES----CCCHHHHHHHHHCCEECEEEEEEEESSCGGG
T ss_pred EcCEEEEc---CCHHHHhc-CcCCC----CCCHHHHHHHHhCCCcceeEEEEEECCCCCC
Confidence 69999999 66655443 33322 4667778889999999999999999999985
No 42
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.45 E-value=0.031 Score=51.30 Aligned_cols=60 Identities=10% Similarity=-0.066 Sum_probs=39.3
Q ss_pred CCceEEeCCCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEec
Q 020469 68 MNKKYVGVPGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (326)
Q Consensus 68 ~~~~yv~~~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla 130 (326)
....|...+||+.|+++|++.++.+|+++++|++|.. .+++..+...+... ..--+|++.
T Consensus 309 ~~~~~~i~GG~~~l~~~l~~~l~~~i~l~~~V~~I~~--~~~gv~v~~~~~~~-~~g~~~~~~ 368 (376)
T 2e1m_A 309 RATYWEIEGGSRMLPETLAKDLRDQIVMGQRMVRLEY--YDPGRDGHHGELTG-PGGPAVAIQ 368 (376)
T ss_dssp TCCEEEETTCTTHHHHHHHHHGGGTEECSEEEEEEEE--CCCC--------------CCEEEE
T ss_pred CCceEEECCcHHHHHHHHHHhcCCcEEecCeEEEEEE--CCCceEEEeCCCcC-CCCCeeEEE
Confidence 3567888999999999999999878999999999997 55665554432211 123446665
No 43
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=94.25 E-value=0.29 Score=47.36 Aligned_cols=40 Identities=25% Similarity=0.209 Sum_probs=32.6
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEc--cCC-CccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG--LDG-QSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~--~~g-~~~~~~d~VVla~ 131 (326)
.+++|+++++|++|+. ++++|.|+. .+| +.+ .+|.||.|+
T Consensus 161 ~gv~i~~~~~v~~l~~--~~~~v~v~~~~~~G~~~~-~a~~vV~AD 203 (570)
T 3fmw_A 161 AGAEIPRGHEVTRLRQ--DAEAVEVTVAGPSGPYPV-RARYGVGCD 203 (570)
T ss_dssp HTEECCBSCEEEECCB--CSSCEEEEEEETTEEEEE-EESEEEECS
T ss_pred CCCEEEeCCEEEEEEE--cCCeEEEEEEeCCCcEEE-EeCEEEEcC
Confidence 4778999999999987 677888876 567 443 899999995
No 44
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.97 E-value=0.29 Score=44.83 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=28.8
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+++.+.||. +.|.++.-|+.+|..+|+.|.+.+
T Consensus 287 ~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~ 326 (421)
T 3nix_A 287 GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFL 326 (421)
T ss_dssp ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHh
Confidence 3689999996 357799999999999999998765
No 45
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=93.80 E-value=0.47 Score=46.11 Aligned_cols=42 Identities=12% Similarity=0.134 Sum_probs=32.2
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEcc-CC--CccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGL-DG--QSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~g--~~~~~~d~VVla~ 131 (326)
..+++|+++++|.+|.. .+++.|.|.+. +| ..+ .+|.||.|+
T Consensus 140 ~~Gv~i~~g~~V~~v~~-~~g~~~~V~~~~~G~~~~i-~AdlVV~Ad 184 (591)
T 3i3l_A 140 SRGITVHEETPVTDVDL-SDPDRVVLTVRRGGESVTV-ESDFVIDAG 184 (591)
T ss_dssp HTTCEEETTCCEEEEEC-CSTTCEEEEEEETTEEEEE-EESEEEECC
T ss_pred hCCCEEEeCCEEEEEEE-cCCCEEEEEEecCCceEEE-EcCEEEECC
Confidence 35788999999999986 23567888776 56 233 799999994
No 46
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=93.40 E-value=0.5 Score=44.89 Aligned_cols=34 Identities=32% Similarity=0.340 Sum_probs=28.5
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+++.+.||. +.|.++.-|+++|..+|+.|...+
T Consensus 295 ~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l 334 (512)
T 3e1t_A 295 KNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCL 334 (512)
T ss_dssp CSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 4679999997 356799999999999999987654
No 47
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=93.12 E-value=3.6 Score=40.14 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=28.0
Q ss_pred CCCeEEeeCCC------CCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDFC------VSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~~------~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.++++++||.. .|-+++-|+.++..+|..|...+
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl 380 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVL 380 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHH
Confidence 68999999984 46689999999999888886644
No 48
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.86 E-value=0.86 Score=41.12 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=28.2
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+++.+.||. +.|.++.-|+.+|..+|+.|...+
T Consensus 276 ~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~ 315 (397)
T 3cgv_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAI 315 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3689999996 356799999999999999887654
No 49
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.30 E-value=0.24 Score=49.09 Aligned_cols=50 Identities=16% Similarity=0.273 Sum_probs=37.4
Q ss_pred hHHHHHHhc---CCCCeeEcceeEeeEEeecCCCCeEEEccCCC-ccccccEEEecc
Q 020469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~-~~~~~d~VVla~ 131 (326)
..+.+.|.+ ..|++|+++++|++|.. ++++|.|.+.+|+ .+ .+|.||+|+
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~--~~~~v~V~t~~G~~~i-~Ad~VVlAt 465 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKR--IDSQWQLTFGQSQAAK-HHATVILAT 465 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEE--CSSSEEEEEC-CCCCE-EESEEEECC
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEE--eCCeEEEEeCCCcEEE-ECCEEEECC
Confidence 344444443 35788999999999998 6678999988875 44 799999993
No 50
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=91.25 E-value=0.14 Score=46.25 Aligned_cols=39 Identities=13% Similarity=0.039 Sum_probs=32.8
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.|++|+++++|++|.. ++++|.|.+.+| .+ .+|.||+|+
T Consensus 167 ~Gv~i~~~~~V~~i~~--~~~~~~V~t~~g-~i-~a~~VV~A~ 205 (381)
T 3nyc_A 167 NQGQVLCNHEALEIRR--VDGAWEVRCDAG-SY-RAAVLVNAA 205 (381)
T ss_dssp TTCEEESSCCCCEEEE--ETTEEEEECSSE-EE-EESEEEECC
T ss_pred CCCEEEcCCEEEEEEE--eCCeEEEEeCCC-EE-EcCEEEECC
Confidence 5788999999999997 556799998877 33 799999993
No 51
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.83 E-value=0.21 Score=49.38 Aligned_cols=49 Identities=14% Similarity=0.283 Sum_probs=37.7
Q ss_pred HHHHHHhc---CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++.|.+ ..|++|+++++|++|.. ++++|.|.+.+|+.+ .+|.||+|+
T Consensus 418 ~l~~aL~~~a~~~Gv~i~~~t~V~~l~~--~~~~v~V~t~~G~~i-~Ad~VVlAt 469 (676)
T 3ps9_A 418 ELTRNVLELAQQQGLQIYYQYQLQNFSR--KDDCWLLNFAGDQQA-THSVVVLAN 469 (676)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHHHHHHhCCCEEEeCCeeeEEEE--eCCeEEEEECCCCEE-ECCEEEECC
Confidence 44444443 35788999999999997 567799988777654 799999993
No 52
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=90.52 E-value=0.22 Score=46.15 Aligned_cols=40 Identities=18% Similarity=0.137 Sum_probs=33.5
Q ss_pred CCCeeEcce---eEeeEEeecCCCCeE-EEccCCCccccccEEEecc
Q 020469 89 PGVESKFGV---GVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~---~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~ 131 (326)
.|++|++++ +|++|.. ++++|. |.+.+|+.+ .+|.||+|+
T Consensus 174 ~Gv~i~~~t~~~~V~~i~~--~~~~v~gV~t~~G~~i-~Ad~VV~At 217 (438)
T 3dje_A 174 MGVKFVTGTPQGRVVTLIF--ENNDVKGAVTADGKIW-RAERTFLCA 217 (438)
T ss_dssp TTCEEEESTTTTCEEEEEE--ETTEEEEEEETTTEEE-ECSEEEECC
T ss_pred cCCEEEeCCcCceEEEEEe--cCCeEEEEEECCCCEE-ECCEEEECC
Confidence 578999999 9999987 567788 888888544 799999994
No 53
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=90.39 E-value=0.32 Score=43.38 Aligned_cols=40 Identities=8% Similarity=-0.007 Sum_probs=32.2
Q ss_pred CCCeeEcceeEeeEEeecCCCC-eEEEccCCC--ccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQ--SLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~--~~~~~d~VVla~ 131 (326)
.|++|+++++|.+|.. ++++ |.|.+.+|+ .+ .+|.||+|+
T Consensus 163 ~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~~-~a~~VV~A~ 205 (369)
T 3dme_A 163 DGAQLVFHTPLIAGRV--RPEGGFELDFGGAEPMTL-SCRVLINAA 205 (369)
T ss_dssp TTCEEECSCCEEEEEE--CTTSSEEEEECTTSCEEE-EEEEEEECC
T ss_pred CCCEEECCCEEEEEEE--cCCceEEEEECCCceeEE-EeCEEEECC
Confidence 5789999999999997 5444 999888773 33 799999993
No 54
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.00 E-value=0.21 Score=48.04 Aligned_cols=59 Identities=25% Similarity=0.414 Sum_probs=43.6
Q ss_pred EEeCCCchHHHHHHhcCCCC--eeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 72 YVGVPGMNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 72 yv~~~Gm~~l~~~La~~l~~--~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
|...+-+....+..++..++ .|+++++|.++.++.+++.|.|.+.+|+.+ .+|.||+|+
T Consensus 83 ~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i-~ad~lV~At 143 (540)
T 3gwf_A 83 YITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVY-RAKYVVNAV 143 (540)
T ss_dssp EEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEE-EEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEE-EeCEEEECC
Confidence 44444445555566666665 799999999999844445899999888755 899999995
No 55
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=89.44 E-value=0.52 Score=42.99 Aligned_cols=50 Identities=14% Similarity=0.094 Sum_probs=39.2
Q ss_pred hHHHHHHhcCCC-CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 79 NSICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..|.+.|.+.+. .+|+++++|.+|+. ++++|.|++.+|+.+ .+|.||.|+
T Consensus 128 ~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~~-~ad~vV~Ad 178 (398)
T 2xdo_A 128 NDLRAILLNSLENDTVIWDRKLVMLEP--GKKKWTLTFENKPSE-TADLVILAN 178 (398)
T ss_dssp HHHHHHHHHTSCTTSEEESCCEEEEEE--CSSSEEEEETTSCCE-EESEEEECS
T ss_pred HHHHHHHHhhcCCCEEEECCEEEEEEE--CCCEEEEEECCCcEE-ecCEEEECC
Confidence 345666666552 57999999999997 667899998888654 899999995
No 56
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=89.26 E-value=0.37 Score=38.50 Aligned_cols=40 Identities=15% Similarity=0.134 Sum_probs=32.7
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..+++++++ +|.+|+. ++++|.+.+++| .+ .+|.||+|+
T Consensus 67 ~~~gv~v~~~-~v~~i~~--~~~~~~v~~~~g-~i-~ad~vI~A~ 106 (180)
T 2ywl_A 67 RRYGAEVRPG-VVKGVRD--MGGVFEVETEEG-VE-KAERLLLCT 106 (180)
T ss_dssp HHTTCEEEEC-CCCEEEE--CSSSEEEECSSC-EE-EEEEEEECC
T ss_pred HHcCCEEEeC-EEEEEEE--cCCEEEEEECCC-EE-EECEEEECC
Confidence 3457889999 9999987 667799988888 44 899999994
No 57
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=89.11 E-value=0.36 Score=46.49 Aligned_cols=53 Identities=13% Similarity=0.166 Sum_probs=40.1
Q ss_pred chHHHHHHhcCCCC--eeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 78 MNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 78 m~~l~~~La~~l~~--~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+....+.+++..+. .++++++|.++.++.+.+.|.|.+++|+.+ .||.||+|+
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i-~ad~lV~At 155 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEV-SARFLVVAA 155 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEE-EeCEEEECc
Confidence 33444555555664 789999999999844445899999888765 899999995
No 58
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.10 E-value=0.3 Score=43.33 Aligned_cols=50 Identities=8% Similarity=-0.051 Sum_probs=38.6
Q ss_pred chHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeE-EEccCCCccccccEEEecc
Q 020469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 78 m~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~ 131 (326)
+....+.+++..+++++++++|.+|.. +++.|. |.+++| .+ .||.||+|+
T Consensus 78 ~~~~l~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g-~~-~~d~vV~At 128 (357)
T 4a9w_A 78 VLAYLAQYEQKYALPVLRPIRVQRVSH--FGERLRVVARDGR-QW-LARAVISAT 128 (357)
T ss_dssp HHHHHHHHHHHTTCCEECSCCEEEEEE--ETTEEEEEETTSC-EE-EEEEEEECC
T ss_pred HHHHHHHHHHHcCCEEEcCCEEEEEEE--CCCcEEEEEeCCC-EE-EeCEEEECC
Confidence 333444455556778999999999998 667899 998887 44 899999995
No 59
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=88.77 E-value=0.91 Score=41.33 Aligned_cols=50 Identities=18% Similarity=0.077 Sum_probs=39.1
Q ss_pred hHHHHHHhcCC-CCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 79 NSICKALCHQP-GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l-~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..|.+.|.+.+ +++|+++++|.+|+. ++++|.+++.+|+.+ .+|.||.|+
T Consensus 99 ~~l~~~L~~~~~~~~i~~~~~v~~i~~--~~~~v~v~~~~g~~~-~ad~vV~Ad 149 (397)
T 2vou_A 99 DSIYGGLYELFGPERYHTSKCLVGLSQ--DSETVQMRFSDGTKA-EANWVIGAD 149 (397)
T ss_dssp HHHHHHHHHHHCSTTEETTCCEEEEEE--CSSCEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHHHHhCCCcEEEcCCEEEEEEe--cCCEEEEEECCCCEE-ECCEEEECC
Confidence 45555555443 467999999999997 677899998888654 899999994
No 60
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=88.68 E-value=0.52 Score=42.31 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=32.7
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.. ++++|.+.+.+|+ + .+|.||+|+
T Consensus 162 ~G~~i~~~~~V~~i~~--~~~~~~v~~~~g~-~-~a~~vV~a~ 200 (372)
T 2uzz_A 162 AGCAQLFNCPVTAIRH--DDDGVTIETADGE-Y-QAKKAIVCA 200 (372)
T ss_dssp TTCEEECSCCEEEEEE--CSSSEEEEESSCE-E-EEEEEEECC
T ss_pred CCCEEEcCCEEEEEEE--cCCEEEEEECCCe-E-EcCEEEEcC
Confidence 5788999999999987 6677999887775 3 799999993
No 61
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=88.51 E-value=0.54 Score=42.81 Aligned_cols=39 Identities=28% Similarity=0.256 Sum_probs=33.2
Q ss_pred CCeeEcceeEeeEEeecCCCCe--EEEccCCCccccccEEEecc
Q 020469 90 GVESKFGVGVGRFEWLEDKNLW--SVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~w--~l~~~~g~~~~~~d~VVla~ 131 (326)
+++|+++++|++|+. ++++| .|.+.+|+.+ .+|.||.|+
T Consensus 122 gv~i~~~~~v~~i~~--~~~~v~g~v~~~~g~~~-~ad~vV~Ad 162 (399)
T 2x3n_A 122 TVEMLFETRIEAVQR--DERHAIDQVRLNDGRVL-RPRVVVGAD 162 (399)
T ss_dssp TEEEECSCCEEEEEE--CTTSCEEEEEETTSCEE-EEEEEEECC
T ss_pred CcEEEcCCEEEEEEE--cCCceEEEEEECCCCEE-ECCEEEECC
Confidence 678999999999987 66788 8988888654 799999995
No 62
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=88.39 E-value=0.71 Score=41.79 Aligned_cols=51 Identities=14% Similarity=0.119 Sum_probs=41.4
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..|-+.|.+.++.+|+++++|.+++. .+++++.|+++||+.+ .+|.||-|+
T Consensus 112 ~~L~~~L~~~~~~~v~~~~~v~~~~~-~~~~~v~v~~~dG~~~-~adlvVgAD 162 (412)
T 4hb9_A 112 TELKEILNKGLANTIQWNKTFVRYEH-IENGGIKIFFADGSHE-NVDVLVGAD 162 (412)
T ss_dssp HHHHHHHHTTCTTTEECSCCEEEEEE-CTTSCEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHHHhhccceEEEEEEEEeeeE-cCCCeEEEEECCCCEE-EeeEEEECC
Confidence 35677788888778999999999986 2445789999999764 899999985
No 63
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=88.09 E-value=0.46 Score=44.02 Aligned_cols=59 Identities=17% Similarity=0.290 Sum_probs=43.0
Q ss_pred CCCchHHHHHHhcC---CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCc
Q 020469 75 VPGMNSICKALCHQ---PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137 (326)
Q Consensus 75 ~~Gm~~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap 137 (326)
......+.+.|.+. .+++|+++++|.+|.. ++++|.|.+.+| .+ .+|.||+|+-+.+.|
T Consensus 128 ~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~--~~~~~~V~~~~g-~i-~ad~VIlAtG~~S~p 189 (417)
T 3v76_A 128 DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVER--TASGFRVTTSAG-TV-DAASLVVASGGKSIP 189 (417)
T ss_dssp SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEE--ETTEEEEEETTE-EE-EESEEEECCCCSSCG
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEE--eCCEEEEEECCc-EE-EeeEEEECCCCccCC
Confidence 34445666655543 3688999999999987 566799988877 44 799999997554433
No 64
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=87.70 E-value=0.19 Score=44.73 Aligned_cols=37 Identities=19% Similarity=0.258 Sum_probs=30.6
Q ss_pred ccCCCeEEeeCCCC--------CCChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCV--------SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~--------g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++|++|||... |+.+-+++.||++||+.|++.|+
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 44678999999631 56778899999999999999986
No 65
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=87.17 E-value=0.41 Score=44.53 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=34.7
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccC---CC---ccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ---SLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---g~---~~~~~d~VVla~ 131 (326)
.+..++..+..|+++++|.+|.. .+++|.|++.+ |+ . ..||.||+|+
T Consensus 121 l~~~~~~~~~~i~~~t~V~~v~~--~~~~~~V~~~~~~~G~~~~~-~~~d~VVvAt 173 (447)
T 2gv8_A 121 QRIYAQPLLPFIKLATDVLDIEK--KDGSWVVTYKGTKAGSPISK-DIFDAVSICN 173 (447)
T ss_dssp HHHHHGGGGGGEECSEEEEEEEE--ETTEEEEEEEESSTTCCEEE-EEESEEEECC
T ss_pred HHHHHHHhhCeEEeCCEEEEEEe--CCCeEEEEEeecCCCCeeEE-EEeCEEEECC
Confidence 33444444556999999999987 56779998765 64 3 3799999995
No 66
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=87.16 E-value=0.69 Score=41.37 Aligned_cols=45 Identities=4% Similarity=0.050 Sum_probs=35.7
Q ss_pred HHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+.+++..+++++++++|.+|.. ++++|.|.+.+|. + .||+||+|+
T Consensus 95 ~~~~~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~g~-~-~~d~vVlAt 139 (369)
T 3d1c_A 95 QVVANHYELNIFENTVVTNISA--DDAYYTIATTTET-Y-HADYIFVAT 139 (369)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--CSSSEEEEESSCC-E-EEEEEEECC
T ss_pred HHHHHHcCCeEEeCCEEEEEEE--CCCeEEEEeCCCE-E-EeCEEEECC
Confidence 3444556788999999999987 5668999887774 3 799999995
No 67
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=86.90 E-value=0.69 Score=41.67 Aligned_cols=39 Identities=21% Similarity=0.077 Sum_probs=32.2
Q ss_pred CCCeeEcceeEeeEEeecCCCCeE-EEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.. ++++|. |.+.+| .+ .+|.||+|+
T Consensus 162 ~Gv~i~~~~~v~~i~~--~~~~v~gv~~~~g-~i-~a~~VV~A~ 201 (382)
T 1y56_B 162 YGAKLLEYTEVKGFLI--ENNEIKGVKTNKG-II-KTGIVVNAT 201 (382)
T ss_dssp TTCEEECSCCEEEEEE--SSSBEEEEEETTE-EE-ECSEEEECC
T ss_pred CCCEEECCceEEEEEE--ECCEEEEEEECCc-EE-ECCEEEECc
Confidence 5788999999999997 667888 887777 33 799999993
No 68
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=86.70 E-value=0.36 Score=46.47 Aligned_cols=53 Identities=15% Similarity=0.261 Sum_probs=39.9
Q ss_pred chHHHHHHhcCCCC--eeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 78 MNSICKALCHQPGV--ESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 78 m~~l~~~La~~l~~--~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+....+.+++..+. .|+++++|.++.++.+++.|.|.+++|+.+ .||.||+|+
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~lV~At 143 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVV-TCRFLISAT 143 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEE-EEEEEEECC
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEE-EeCEEEECc
Confidence 34444555555453 689999999999854556899999888765 899999995
No 69
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=86.24 E-value=0.64 Score=44.55 Aligned_cols=51 Identities=14% Similarity=0.199 Sum_probs=37.6
Q ss_pred HHHHHHhcCCC--CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 80 SICKALCHQPG--VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 80 ~l~~~La~~l~--~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
...+.+++..+ .+|+++++|.+++++.+++.|.|.+.+|+.+ .+|.||+|+
T Consensus 98 ~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~-~ad~vV~At 150 (542)
T 1w4x_A 98 RYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRI-RARYLIMAS 150 (542)
T ss_dssp HHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEE-EEEEEEECC
T ss_pred HHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEE-EeCEEEECc
Confidence 33444455444 5699999999999843345799998888654 799999995
No 70
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=86.09 E-value=0.65 Score=42.18 Aligned_cols=48 Identities=19% Similarity=0.102 Sum_probs=35.3
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..|.+.+. ..+++|+++++|.+|.. ++++|.|.+++|+ + .+|.||+|+
T Consensus 157 ~~l~~~a~-~~Gv~i~~~~~V~~i~~--~~~~v~v~t~~g~-i-~a~~VV~A~ 204 (397)
T 2oln_A 157 AALFTLAQ-AAGATLRAGETVTELVP--DADGVSVTTDRGT-Y-RAGKVVLAC 204 (397)
T ss_dssp HHHHHHHH-HTTCEEEESCCEEEEEE--ETTEEEEEESSCE-E-EEEEEEECC
T ss_pred HHHHHHHH-HcCCEEECCCEEEEEEE--cCCeEEEEECCCE-E-EcCEEEEcC
Confidence 34444433 35788999999999987 5567888876663 3 799999994
No 71
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=85.93 E-value=0.68 Score=43.13 Aligned_cols=54 Identities=24% Similarity=0.243 Sum_probs=38.6
Q ss_pred hHHHHHHhc---CCCCeeEcceeEeeEEeecCCCC-eEEEccCCCccccccEEEeccCCCC
Q 020469 79 NSICKALCH---QPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASDKNVV 135 (326)
Q Consensus 79 ~~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~~~~~~d~VVla~~~~p 135 (326)
..+.+.|.+ ..+++|+++++|.+|.. ++++ |.|.+.+|+.+ .+|.||+|+-+.+
T Consensus 134 ~~l~~~L~~~~~~~GV~i~~~~~V~~i~~--~~~~v~~V~~~~G~~i-~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 134 QSVVDALLTRLKDLGVKIRTNTPVETIEY--ENGQTKAVILQTGEVL-ETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTCCEE-ECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHCCCEEEeCcEEEEEEe--cCCcEEEEEECCCCEE-ECCEEEECCCCCc
Confidence 444444443 25788999999999986 4454 88888888644 7999999964443
No 72
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=85.86 E-value=0.77 Score=41.35 Aligned_cols=39 Identities=15% Similarity=0.190 Sum_probs=32.1
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.. ++++|.+.+.+| .+ .+|.||+|+
T Consensus 163 ~Gv~i~~~~~v~~i~~--~~~~~~v~~~~g-~~-~a~~vV~A~ 201 (389)
T 2gf3_A 163 RGAKVLTHTRVEDFDI--SPDSVKIETANG-SY-TADKLIVSM 201 (389)
T ss_dssp TTCEEECSCCEEEEEE--CSSCEEEEETTE-EE-EEEEEEECC
T ss_pred CCCEEEcCcEEEEEEe--cCCeEEEEeCCC-EE-EeCEEEEec
Confidence 4788999999999997 666799887666 33 799999993
No 73
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=85.62 E-value=16 Score=35.70 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=26.9
Q ss_pred CCCeEEeeCCC------CCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDFC------VSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~~------~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+|++++||.. .|-+++-|+..+..+|..|...+
T Consensus 350 ~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl 389 (665)
T 1pn0_A 350 DERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL 389 (665)
T ss_dssp TTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH
Confidence 57999999984 45688888888888888776544
No 74
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=85.31 E-value=0.93 Score=42.82 Aligned_cols=46 Identities=11% Similarity=-0.005 Sum_probs=35.5
Q ss_pred HHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 83 KALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..++..|++|+++++|.+|.. +++++.+.+.+|+.+ .+|.||+|+
T Consensus 230 ~~~l~~~GV~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~aD~Vv~a~ 275 (499)
T 1xdi_A 230 EESFAERGVRLFKNARAASVTR--TGAGVLVTMTDGRTV-EGSHALMTI 275 (499)
T ss_dssp HHHHHHTTCEEETTCCEEEEEE--CSSSEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHCCCEEEeCCEEEEEEE--eCCEEEEEECCCcEE-EcCEEEECC
Confidence 3334446789999999999987 556688877777654 799999994
No 75
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=84.64 E-value=0.99 Score=40.93 Aligned_cols=45 Identities=18% Similarity=0.097 Sum_probs=35.1
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..++..+++++++++|.+|+. +++++.+.+.+|+.+ .+|.||+|+
T Consensus 195 ~~l~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~g~~i-~~d~vv~a~ 239 (384)
T 2v3a_A 195 AGLEGLGVRFHLGPVLASLKK--AGEGLEAHLSDGEVI-PCDLVVSAV 239 (384)
T ss_dssp HHHHTTTCEEEESCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECS
T ss_pred HHHHHcCCEEEeCCEEEEEEe--cCCEEEEEECCCCEE-ECCEEEECc
Confidence 333446789999999999986 556678888788654 799999993
No 76
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=84.36 E-value=1.3 Score=40.52 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=36.5
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCe-EEEccCCCccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~g~~~~~~d~VVla~ 131 (326)
....+.+.+..+++|+++++|.+|.. ++++. .+.+.+|+.+ .+|.||+++
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~~v~l~dG~~i-~aD~Vv~a~ 247 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEG--DGTKVTGVRMQDGSVI-PADIVIVGI 247 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEE--SSSBEEEEEESSSCEE-ECSEEEECS
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEe--cCCcEEEEEeCCCCEE-EcCEEEECC
Confidence 33344444556889999999999986 44444 5777788765 799999993
No 77
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=84.21 E-value=1.3 Score=40.64 Aligned_cols=57 Identities=16% Similarity=0.174 Sum_probs=40.7
Q ss_pred CchHHHHHHhcC---CCCeeEcceeEeeEEeecC----CCCeEEEccCCCccccccEEEeccCCCCCc
Q 020469 77 GMNSICKALCHQ---PGVESKFGVGVGRFEWLED----KNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137 (326)
Q Consensus 77 Gm~~l~~~La~~---l~~~i~~~~~V~~i~~~~~----~~~w~l~~~~g~~~~~~d~VVla~~~~pap 137 (326)
....+.+.|.+. .+++|+++++|.+|.. + +++|.|.+.+| .+ .+|.||+|+-+.+.|
T Consensus 107 ~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~--~~~g~~~~~~v~~~~g-~i-~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 107 GAEQIVEMLKSECDKYGAKILLRSEVSQVER--IQNDEKVRFVLQVNST-QW-QCKNLIVATGGLSMP 170 (401)
T ss_dssp CTHHHHHHHHHHHHHHTCEEECSCCEEEEEE--CCSCSSCCEEEEETTE-EE-EESEEEECCCCSSCG
T ss_pred CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEc--ccCcCCCeEEEEECCC-EE-ECCEEEECCCCccCC
Confidence 344555555433 4688999999999987 4 56799987766 44 799999997555544
No 78
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=83.83 E-value=1.3 Score=38.67 Aligned_cols=42 Identities=7% Similarity=0.000 Sum_probs=33.9
Q ss_pred hcCCCCeeEcceeEeeEEeecCCC-CeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++..+++++++++|.+|.. .++ .|.+.+.+|+ + .||.||+|+
T Consensus 77 ~~~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g~-~-~~d~vVlAt 119 (332)
T 3lzw_A 77 MAKFDQTICLEQAVESVEK--QADGVFKLVTNEET-H-YSKTVIITA 119 (332)
T ss_dssp HTTSCCEEECSCCEEEEEE--CTTSCEEEEESSEE-E-EEEEEEECC
T ss_pred HHHhCCcEEccCEEEEEEE--CCCCcEEEEECCCE-E-EeCEEEECC
Confidence 3445788999999999997 444 7999988886 3 799999994
No 79
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=83.81 E-value=0.95 Score=41.55 Aligned_cols=47 Identities=26% Similarity=0.352 Sum_probs=35.5
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+...+..+++++++++|.+|.. +++...+.+.+|+.+ .+|.||+++
T Consensus 191 l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~~~dg~~i-~aD~Vv~a~ 237 (410)
T 3ef6_A 191 LRGLLTELGVQVELGTGVVGFSG--EGQLEQVMASDGRSF-VADSALICV 237 (410)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEC--SSSCCEEEETTSCEE-ECSEEEECS
T ss_pred HHHHHHHCCCEEEeCCEEEEEec--cCcEEEEEECCCCEE-EcCEEEEee
Confidence 33444445788999999999986 445567878888765 799999993
No 80
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=83.11 E-value=1.2 Score=41.65 Aligned_cols=47 Identities=17% Similarity=0.070 Sum_probs=36.1
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+..++..+++++++++|.+|+. +++++.+...+|+.+ .+|.||+|+
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~~~~g~~i-~aD~Vv~a~ 254 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEG--ENGKVARVITDKRTL-DADLVILAA 254 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEE--SSSBEEEEEESSCEE-ECSEEEECS
T ss_pred HHHHHHhcCCEEEeCCEEEEEEc--cCCeEEEEEeCCCEE-EcCEEEECC
Confidence 33344456789999999999986 566777777788654 799999994
No 81
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=82.65 E-value=1.1 Score=42.04 Aligned_cols=41 Identities=17% Similarity=0.284 Sum_probs=33.9
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+++|+++++|.+|+. +++++.+.+.+|+.+ .+|.||+|+
T Consensus 244 ~~Gv~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~aD~Vi~A~ 284 (484)
T 3o0h_A 244 AKGISIIYEATVSQVQS--TENCYNVVLTNGQTI-CADRVMLAT 284 (484)
T ss_dssp HHTCEEESSCCEEEEEE--CSSSEEEEETTSCEE-EESEEEECC
T ss_pred HCCCEEEeCCEEEEEEe--eCCEEEEEECCCcEE-EcCEEEEee
Confidence 34788999999999987 667788888888654 799999994
No 82
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=81.70 E-value=1.6 Score=41.20 Aligned_cols=48 Identities=15% Similarity=0.076 Sum_probs=36.1
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
......+..+++++++++|.+|.. +++...+.+.+|+.+ .+|.||+++
T Consensus 231 ~~~~~l~~~GV~v~~~~~V~~i~~--~~~~~~v~l~dG~~i-~aD~Vv~a~ 278 (493)
T 1m6i_A 231 WTMEKVRREGVKVMPNAIVQSVGV--SSGKLLIKLKDGRKV-ETDHIVAAV 278 (493)
T ss_dssp HHHHHHHTTTCEEECSCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEe--cCCeEEEEECCCCEE-ECCEEEECC
Confidence 334444556889999999999986 445567777788664 899999994
No 83
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=81.61 E-value=1.2 Score=41.49 Aligned_cols=54 Identities=17% Similarity=0.127 Sum_probs=37.0
Q ss_pred chHHHHHHhcCCCCeeEcceeEeeEEeecC-CCCe--EEEccCCC----ccccccEEEeccC
Q 020469 78 MNSICKALCHQPGVESKFGVGVGRFEWLED-KNLW--SVSGLDGQ----SLGQFNGVVASDK 132 (326)
Q Consensus 78 m~~l~~~La~~l~~~i~~~~~V~~i~~~~~-~~~w--~l~~~~g~----~~~~~d~VVla~~ 132 (326)
+....+..++.++.+|+++++|.+|++..+ ++.| .|.+.+|+ .+ .||.||+|+-
T Consensus 129 ~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~-~~d~lVlAtG 189 (463)
T 3s5w_A 129 FNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVR-TTRALVVSPG 189 (463)
T ss_dssp HHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEE-EESEEEECCC
T ss_pred HHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEE-EeCEEEECCC
Confidence 334455556777778999999999987211 4455 66665553 43 7999999953
No 84
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=81.36 E-value=1.9 Score=38.90 Aligned_cols=39 Identities=21% Similarity=0.191 Sum_probs=30.9
Q ss_pred CCCeeEcceeEeeEEeecCCC-CeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.. +++ .|.|.+.+| .+ .+|.||+|+
T Consensus 187 ~g~~i~~~~~v~~i~~--~~~~~~~v~~~~g-~~-~a~~vV~a~ 226 (405)
T 2gag_B 187 MGVDIIQNCEVTGFIK--DGEKVTGVKTTRG-TI-HAGKVALAG 226 (405)
T ss_dssp TTCEEECSCCEEEEEE--SSSBEEEEEETTC-CE-EEEEEEECC
T ss_pred CCCEEEcCCeEEEEEE--eCCEEEEEEeCCc-eE-ECCEEEECC
Confidence 5788999999999987 444 477887777 33 799999993
No 85
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=81.21 E-value=1.7 Score=41.79 Aligned_cols=36 Identities=11% Similarity=0.106 Sum_probs=30.4
Q ss_pred cCCCeEEeeCCCC-CCChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDFCV-SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~~~-g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
.-.+||.|||.-. .++|-.|..+|..+|+.|+..+.
T Consensus 507 ~~~gly~~GegaG~a~gi~~Aa~~G~~~a~~i~~~~~ 543 (549)
T 3nlc_A 507 NLKGFYPAGEGAGYAGGILSAGIDGIKVAEAVARDIV 543 (549)
T ss_dssp TCBTEEECHHHHTSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEccccCChhhHHHHHHHHHHHHHHHHHHHhh
Confidence 4679999999753 47899999999999999987764
No 86
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=81.09 E-value=1.3 Score=38.93 Aligned_cols=41 Identities=15% Similarity=0.227 Sum_probs=32.8
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+.+++++++|.+|.. +++.|.+.+.+|..+ .||.||+|+
T Consensus 77 ~~~~~~~~~~~v~~i~~--~~~~~~v~~~~g~~~-~~~~lv~At 117 (335)
T 2zbw_A 77 PFNPVYSLGERAETLER--EGDLFKVTTSQGNAY-TAKAVIIAA 117 (335)
T ss_dssp GGCCEEEESCCEEEEEE--ETTEEEEEETTSCEE-EEEEEEECC
T ss_pred HcCCEEEeCCEEEEEEE--CCCEEEEEECCCCEE-EeCEEEECC
Confidence 34677899999999987 445799988777554 799999994
No 87
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=80.09 E-value=2.1 Score=37.14 Aligned_cols=47 Identities=9% Similarity=0.069 Sum_probs=34.9
Q ss_pred HHhcCCCCeeEcceeEeeEEeecC-CCCeEEEccCCCccccccEEEecc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLED-KNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~-~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..++..+++++++++|.+|.+..+ ++.|.+.+++|+.+ .||.||+|+
T Consensus 64 ~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~-~~~~lv~At 111 (310)
T 1fl2_A 64 VHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVL-KARSIIVAT 111 (310)
T ss_dssp HHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEE-EEEEEEECC
T ss_pred HHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEE-EeCEEEECc
Confidence 334456788999999999976211 24799988888654 799999995
No 88
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=79.93 E-value=1.8 Score=39.58 Aligned_cols=46 Identities=20% Similarity=0.214 Sum_probs=34.0
Q ss_pred HHHhcCCCCeeEcceeEeeEEeecCCCC-eEEEccCCCccccccEEEecc
Q 020469 83 KALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 83 ~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~~~~~~d~VVla~ 131 (326)
+.+.+..+++++++++|.+|.. ++++ ..|.+.+|+.+ .+|.||+|+
T Consensus 191 ~~~l~~~GV~i~~~~~v~~i~~--~~~~v~~V~~~dG~~i-~aD~Vv~a~ 237 (404)
T 3fg2_P 191 HDRHSGAGIRMHYGVRATEIAA--EGDRVTGVVLSDGNTL-PCDLVVVGV 237 (404)
T ss_dssp HHHHHHTTCEEECSCCEEEEEE--ETTEEEEEEETTSCEE-ECSEEEECC
T ss_pred HHHHHhCCcEEEECCEEEEEEe--cCCcEEEEEeCCCCEE-EcCEEEECc
Confidence 3344456789999999999986 3333 35777788765 799999993
No 89
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=79.63 E-value=2.6 Score=39.09 Aligned_cols=49 Identities=10% Similarity=-0.030 Sum_probs=36.1
Q ss_pred HHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccC
Q 020469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDK 132 (326)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~ 132 (326)
...+..++..+++|+++++|.+|+. .++++.+.+++| .+ .+|.||+|+-
T Consensus 193 ~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~~~~g-~i-~aD~Vv~A~G 241 (452)
T 3oc4_A 193 AEVQKSLEKQAVIFHFEETVLGIEE--TANGIVLETSEQ-EI-SCDSGIFALN 241 (452)
T ss_dssp HHHHHHHHTTTEEEEETCCEEEEEE--CSSCEEEEESSC-EE-EESEEEECSC
T ss_pred HHHHHHHHHcCCEEEeCCEEEEEEc--cCCeEEEEECCC-EE-EeCEEEECcC
Confidence 3344444556788999999999986 556677777666 44 7999999953
No 90
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=79.29 E-value=1.3 Score=41.15 Aligned_cols=40 Identities=20% Similarity=0.148 Sum_probs=32.3
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++++++|.+|+. +++++.+.+.+|+.+ .+|.||+|+
T Consensus 221 ~Gv~i~~~~~V~~i~~--~~~~v~v~~~~g~~i-~~D~vv~A~ 260 (455)
T 2yqu_A 221 QGLTIRTGVRVTAVVP--EAKGARVELEGGEVL-EADRVLVAV 260 (455)
T ss_dssp HTCEEECSCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECS
T ss_pred CCCEEEECCEEEEEEE--eCCEEEEEECCCeEE-EcCEEEECc
Confidence 4788999999999987 555677877677654 799999994
No 91
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=78.94 E-value=2.8 Score=37.23 Aligned_cols=41 Identities=7% Similarity=0.090 Sum_probs=33.0
Q ss_pred CCCCeeEcceeEeeEEeecCCC-CeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+++++++++|.+|.. .++ .|.|.+.+|+.+ .||.||+|+
T Consensus 86 ~~~~~~~~~~~v~~i~~--~~~~~~~v~~~~g~~~-~~~~li~At 127 (360)
T 3ab1_A 86 RYNPDVVLNETVTKYTK--LDDGTFETRTNTGNVY-RSRAVLIAA 127 (360)
T ss_dssp TTCCEEECSCCEEEEEE--CTTSCEEEEETTSCEE-EEEEEEECC
T ss_pred HhCCEEEcCCEEEEEEE--CCCceEEEEECCCcEE-EeeEEEEcc
Confidence 45678899999999987 443 799988888654 799999995
No 92
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=77.98 E-value=2.6 Score=36.48 Aligned_cols=42 Identities=12% Similarity=0.018 Sum_probs=32.3
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++..++++++ ++|.+|.. +++.|.+.+++|..+ .||.||+|+
T Consensus 80 ~~~~~v~~~~-~~v~~i~~--~~~~~~v~~~~g~~~-~~d~lvlAt 121 (323)
T 3f8d_A 80 IEKYEVPVLL-DIVEKIEN--RGDEFVVKTKRKGEF-KADSVILGI 121 (323)
T ss_dssp HHTTTCCEEE-SCEEEEEE--C--CEEEEESSSCEE-EEEEEEECC
T ss_pred HHHcCCEEEE-EEEEEEEe--cCCEEEEEECCCCEE-EcCEEEECc
Confidence 3345677888 99999987 677899988887654 799999995
No 93
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=77.93 E-value=1.9 Score=40.95 Aligned_cols=42 Identities=24% Similarity=0.194 Sum_probs=33.0
Q ss_pred cCCCCeeEcceeEeeEEeecCCCC----eEEEccCCC-ccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNL----WSVSGLDGQ-SLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~----w~l~~~~g~-~~~~~d~VVla~ 131 (326)
+..+++|+++++|.+|.. ++++ +.|.+.+|+ .+ .+|.||+|+
T Consensus 266 ~~~GV~i~~~~~V~~i~~--~~~~~v~~~~v~~~~G~~~i-~aD~Vv~A~ 312 (523)
T 1mo9_A 266 KEQGMEIISGSNVTRIEE--DANGRVQAVVAMTPNGEMRI-ETDFVFLGL 312 (523)
T ss_dssp HHTTCEEESSCEEEEEEE--CTTSBEEEEEEEETTEEEEE-ECSCEEECC
T ss_pred HhCCcEEEECCEEEEEEE--cCCCceEEEEEEECCCcEEE-EcCEEEECc
Confidence 345789999999999986 4445 778877775 44 799999995
No 94
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=77.87 E-value=1.5 Score=40.93 Aligned_cols=35 Identities=6% Similarity=-0.205 Sum_probs=28.1
Q ss_pred ccCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhh
Q 020469 288 DVKRRLAICGDFCVSPNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~ 322 (326)
...++|+++||-..+..+.-|-..|+.+|+.|...
T Consensus 305 t~~p~i~aiGd~~~~~~~~~a~~qa~~~a~~l~G~ 339 (464)
T 2xve_A 305 EDNPKFFYIGMQDQWYSFNMFDAQAWYARDVIMGR 339 (464)
T ss_dssp SSSTTEEECSCSCCSSCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCEEEEeCcccccchHHHHHHHHHHHHHHcCC
Confidence 45689999999776777888888888888887543
No 95
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=77.47 E-value=2.8 Score=37.80 Aligned_cols=49 Identities=16% Similarity=0.102 Sum_probs=35.0
Q ss_pred HHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEc-cCCC--ccccccEEEecc
Q 020469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ--SLGQFNGVVASD 131 (326)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~--~~~~~d~VVla~ 131 (326)
.|.+.+.+ .+++|+++++|.+|.. .++++|.|.. .+|+ .+ .+|.||.|+
T Consensus 108 ~L~~~~~~-~g~~i~~~~~v~~i~~-~~~~~~~v~~~~~g~~~~~-~a~~vV~Ad 159 (394)
T 1k0i_A 108 DLMEAREA-CGATTVYQAAEVRLHD-LQGERPYVTFERDGERLRL-DCDYIAGCD 159 (394)
T ss_dssp HHHHHHHH-TTCEEESSCEEEEEEC-TTSSSCEEEEEETTEEEEE-ECSEEEECC
T ss_pred HHHHHHHh-cCCeEEeceeEEEEEE-ecCCceEEEEecCCcEEEE-EeCEEEECC
Confidence 34444443 3788999999999986 2235688876 6775 33 799999995
No 96
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=77.25 E-value=2.1 Score=39.94 Aligned_cols=42 Identities=24% Similarity=0.355 Sum_probs=33.3
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEccCCC-ccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~-~~~~~d~VVla~ 131 (326)
+..+++++++++|.+|.. +++++.+.+.+|+ .+ .+|.||+|+
T Consensus 218 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~G~~~i-~~D~vv~a~ 260 (463)
T 2r9z_A 218 HAQGIETHLEFAVAALER--DAQGTTLVAQDGTRLE-GFDSVIWAV 260 (463)
T ss_dssp HHTTCEEESSCCEEEEEE--ETTEEEEEETTCCEEE-EESEEEECS
T ss_pred HHCCCEEEeCCEEEEEEE--eCCeEEEEEeCCcEEE-EcCEEEECC
Confidence 345788999999999986 4455788888886 54 799999994
No 97
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=76.81 E-value=2.9 Score=39.45 Aligned_cols=42 Identities=14% Similarity=0.128 Sum_probs=32.9
Q ss_pred cCCCCeeEcceeEeeEEeecCC-CCeEEEccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..+++|+++++|.+|.. ++ +.+.+.+.+|+.+ .+|.||+|+
T Consensus 246 ~~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G~~i-~~D~vv~a~ 288 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSL--NTDGSKHVTFESGKTL-DVDVVMMAI 288 (495)
T ss_dssp HHTTCEEEESCCEEEEEE--CTTSCEEEEETTSCEE-EESEEEECS
T ss_pred HhCCCEEEeCCEEEEEEE--cCCceEEEEECCCcEE-EcCEEEECC
Confidence 345788999999999986 43 3477877788654 799999994
No 98
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=76.80 E-value=2.8 Score=38.83 Aligned_cols=41 Identities=12% Similarity=0.107 Sum_probs=32.0
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEcc---CCCc-cccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQS-LGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g~~-~~~~d~VVla~ 131 (326)
.+++|+++++|++|+. ++++|.|... +|+. ...+|.||+|+
T Consensus 329 ~~v~i~~~~~v~~v~~--~~~~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 329 PRHAFRCMTTVERATA--TAQGIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp CCSEEETTEEEEEEEE--ETTEEEEEEEETTTCCEEEEEESEEEECC
T ss_pred CCeEEEeCCEEEEEEe--cCCEEEEEEEEcCCCCeEEEECCEEEEee
Confidence 4678999999999987 5677888765 5642 13799999994
No 99
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=76.71 E-value=2.5 Score=39.73 Aligned_cols=42 Identities=10% Similarity=0.082 Sum_probs=32.9
Q ss_pred cCCCCeeEcceeEeeEEeecCC-CCeEEEccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..+++|+++++|.+|.. ++ +.+.+.+.+|+.+ .+|.||+|+
T Consensus 242 ~~~GV~i~~~~~v~~i~~--~~~~~~~v~~~~G~~i-~~D~vv~a~ 284 (490)
T 1fec_A 242 RANGINVRTHENPAKVTK--NADGTRHVVFESGAEA-DYDVVMLAI 284 (490)
T ss_dssp HHTTEEEEETCCEEEEEE--CTTSCEEEEETTSCEE-EESEEEECS
T ss_pred HhCCCEEEeCCEEEEEEE--cCCCEEEEEECCCcEE-EcCEEEEcc
Confidence 345788999999999986 43 3478887788654 799999994
No 100
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=76.16 E-value=2.5 Score=39.27 Aligned_cols=41 Identities=10% Similarity=-0.010 Sum_probs=32.3
Q ss_pred CCCCeeEcceeEeeEEeecCCC-CeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKN-LWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~-~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+++++++++|.+|+. +++ .+.+.+.+|+.+ .+|.||+|+
T Consensus 220 ~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~i-~~D~vv~a~ 261 (450)
T 1ges_A 220 AEGPQLHTNAIPKAVVK--NTDGSLTLELEDGRSE-TVDCLIWAI 261 (450)
T ss_dssp HHSCEEECSCCEEEEEE--CTTSCEEEEETTSCEE-EESEEEECS
T ss_pred HCCCEEEeCCEEEEEEE--eCCcEEEEEECCCcEE-EcCEEEECC
Confidence 35788999999999986 433 378887788654 799999994
No 101
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=75.21 E-value=3.3 Score=38.52 Aligned_cols=43 Identities=9% Similarity=0.006 Sum_probs=33.3
Q ss_pred HhcCCCCeeEcceeEeeEEeecCCCC-eEEE-ccCCCccccccEEEecc
Q 020469 85 LCHQPGVESKFGVGVGRFEWLEDKNL-WSVS-GLDGQSLGQFNGVVASD 131 (326)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~-~~~g~~~~~~d~VVla~ 131 (326)
.++..+++|+++++|.+|+. ++++ +.|. +.+|+ + .+|.||+|+
T Consensus 220 ~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~g~-i-~aD~Vv~a~ 264 (463)
T 4dna_A 220 AMEEKGIRILCEDIIQSVSA--DADGRRVATTMKHGE-I-VADQVMLAL 264 (463)
T ss_dssp HHHHTTCEEECSCCEEEEEE--CTTSCEEEEESSSCE-E-EESEEEECS
T ss_pred HHHHCCCEEECCCEEEEEEE--cCCCEEEEEEcCCCe-E-EeCEEEEee
Confidence 33446788999999999987 4344 6788 88886 4 899999994
No 102
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=74.58 E-value=2.5 Score=36.73 Aligned_cols=40 Identities=18% Similarity=0.071 Sum_probs=31.6
Q ss_pred eeccCCCeEEeeCCCCCC--ChhHHHHHHHHHHHHHHhhhcc
Q 020469 286 LWDVKRRLAICGDFCVSP--NVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 286 ~~~~~~~l~~aGD~~~g~--~vegA~~SG~~aA~~l~~~l~~ 325 (326)
+.+..++||.|||-...+ .+.-|+..|+.||+.|.+.|..
T Consensus 266 ~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 266 MTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp SBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 344567899999987533 5788999999999999877754
No 103
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=73.82 E-value=3.4 Score=35.27 Aligned_cols=37 Identities=22% Similarity=0.265 Sum_probs=31.6
Q ss_pred ccCCCeEEeeCCCC-CCChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCV-SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~-g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||.|||-.. ...+..|+..|..+|..|...|.
T Consensus 255 t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 255 TTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHh
Confidence 34579999999876 57899999999999999988764
No 104
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=73.81 E-value=2.6 Score=38.34 Aligned_cols=38 Identities=5% Similarity=0.118 Sum_probs=30.1
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++++++|.+|.+ +++ .|.+++|+.+ .||+||+|+
T Consensus 75 ~~i~~~~~~~V~~id~--~~~--~v~~~~g~~~-~yd~lvlAt 112 (385)
T 3klj_A 75 NNIKVITSEFATSIDP--NNK--LVTLKSGEKI-KYEKLIIAS 112 (385)
T ss_dssp TTCEEECSCCEEEEET--TTT--EEEETTSCEE-ECSEEEECC
T ss_pred CCCEEEeCCEEEEEEC--CCC--EEEECCCCEE-ECCEEEEec
Confidence 4678999999999986 443 5666778665 899999995
No 105
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=73.66 E-value=3.4 Score=35.73 Aligned_cols=39 Identities=23% Similarity=0.155 Sum_probs=32.9
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhccC
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILSCL 326 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~~~ 326 (326)
...++||.+||-..+ ..+..|+..|..+|..|...|..+
T Consensus 271 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 311 (311)
T 2q0l_A 271 TNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH 311 (311)
T ss_dssp CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHhhC
Confidence 356789999998764 579999999999999999888654
No 106
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=73.45 E-value=1.9 Score=39.39 Aligned_cols=39 Identities=8% Similarity=0.043 Sum_probs=26.0
Q ss_pred CCCeeEcceeEe---------eEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVG---------RFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~---------~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++|+++++|. +|.. ++++|.|.+.+| .+ .+|.||+|+
T Consensus 185 ~Gv~i~~~~~v~~~~g~~~~~~i~~--~~~~v~v~~~~g-~i-~a~~VV~A~ 232 (405)
T 3c4n_A 185 QGAGLLLNTRAELVPGGVRLHRLTV--TNTHQIVVHETR-QI-RAGVIIVAA 232 (405)
T ss_dssp TTCEEECSCEEEEETTEEEEECBCC---------CBCCE-EE-EEEEEEECC
T ss_pred CCCEEEcCCEEEeccccccccceEe--eCCeEEEEECCc-EE-ECCEEEECC
Confidence 578899999999 8876 566787777666 33 799999993
No 107
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=72.93 E-value=3.4 Score=38.44 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=32.1
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEcc-C--CC--ccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGL-D--GQ--SLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~--g~--~~~~~d~VVla~ 131 (326)
++..+++++++++|.+|+. +++++.+... + |+ .+ .+|.||+|+
T Consensus 220 l~~~gV~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i-~~D~vv~a~ 267 (464)
T 2eq6_A 220 LEKEGIRVRTKTKAVGYEK--KKDGLHVRLEPAEGGEGEEV-VVDKVLVAV 267 (464)
T ss_dssp HHHTTCEEECSEEEEEEEE--ETTEEEEEEEETTCCSCEEE-EESEEEECS
T ss_pred HHhcCCEEEcCCEEEEEEE--eCCEEEEEEeecCCCceeEE-EcCEEEECC
Confidence 3445788999999999986 4556667654 5 65 43 799999994
No 108
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=72.60 E-value=4.1 Score=38.32 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=32.9
Q ss_pred hcCCCCeeEcceeEeeEEeecCC-CCeEEEccCCCc-cccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDK-NLWSVSGLDGQS-LGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~~g~~-~~~~d~VVla~ 131 (326)
.+..+++++++++|.+|+. ++ +.+.+...+|+. + .+|.||+|+
T Consensus 227 l~~~gv~i~~~~~v~~i~~--~~~~~~~v~~~~g~~~~-~~D~vi~a~ 271 (500)
T 1onf_A 227 MKKNNINIVTFADVVEIKK--VSDKNLSIHLSDGRIYE-HFDHVIYCV 271 (500)
T ss_dssp HHHTTCEEECSCCEEEEEE--SSTTCEEEEETTSCEEE-EESEEEECC
T ss_pred HHhCCCEEEECCEEEEEEE--cCCceEEEEECCCcEEE-ECCEEEECC
Confidence 3345788999999999986 33 347787778865 4 799999994
No 109
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=72.23 E-value=3.1 Score=38.96 Aligned_cols=41 Identities=7% Similarity=0.010 Sum_probs=31.3
Q ss_pred CCCCeeEcceeEeeEEeecCCCC--eEEEccCC-CccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNL--WSVSGLDG-QSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~g-~~~~~~d~VVla~ 131 (326)
..+++++++++|.+|+. ++++ ..+.+.+| +.+ .+|.||+|+
T Consensus 238 ~~Gv~i~~~~~v~~i~~--~~~~~~~~v~~~~G~~~i-~~D~vv~a~ 281 (479)
T 2hqm_A 238 KEGINVHKLSKIVKVEK--NVETDKLKIHMNDSKSID-DVDELIWTI 281 (479)
T ss_dssp HHTCEEECSCCEEEEEE--CC-CCCEEEEETTSCEEE-EESEEEECS
T ss_pred hCCeEEEeCCEEEEEEE--cCCCcEEEEEECCCcEEE-EcCEEEECC
Confidence 35788999999999986 4333 67777788 544 799999994
No 110
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=71.89 E-value=5 Score=37.35 Aligned_cols=44 Identities=11% Similarity=0.042 Sum_probs=32.0
Q ss_pred HhcCCCCeeEcceeEeeEEeecCCCC-eEEEc-----cCCCccccccEEEecc
Q 020469 85 LCHQPGVESKFGVGVGRFEWLEDKNL-WSVSG-----LDGQSLGQFNGVVASD 131 (326)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~-----~~g~~~~~~d~VVla~ 131 (326)
.++..+++++++++|.+|.. ++++ +.+.. .+++.+ .+|.||+|+
T Consensus 229 ~l~~~Gv~i~~~~~v~~i~~--~~~~~~~v~~~~~~~~~~~~i-~~D~vv~a~ 278 (474)
T 1zmd_A 229 ILQKQGFKFKLNTKVTGATK--KSDGKIDVSIEAASGGKAEVI-TCDVLLVCI 278 (474)
T ss_dssp HHHHTTCEEECSEEEEEEEE--CTTSCEEEEEEETTSCCCEEE-EESEEEECS
T ss_pred HHHHCCCEEEeCceEEEEEE--cCCceEEEEEEecCCCCceEE-EcCEEEECc
Confidence 33446788999999999986 5555 77763 445444 799999994
No 111
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=71.66 E-value=5.8 Score=34.17 Aligned_cols=51 Identities=22% Similarity=0.141 Sum_probs=35.5
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccC---CCc-cccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQS-LGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---g~~-~~~~d~VVla~ 131 (326)
..+.+.+.+..+++++++++|.+|.. +++...+...+ |+. ...+|.||++.
T Consensus 193 ~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 247 (323)
T 3f8d_A 193 PIYVETVKKKPNVEFVLNSVVKEIKG--DKVVKQVVVENLKTGEIKELNVNGVFIEI 247 (323)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHHHHHhCCCcEEEeCCEEEEEec--cCceeEEEEEECCCCceEEEEcCEEEEEE
Confidence 45667777766888999999999986 44433454433 641 23799999993
No 112
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=71.44 E-value=5.1 Score=34.57 Aligned_cols=42 Identities=17% Similarity=0.404 Sum_probs=32.3
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++..++++++ ++|.+|.. +++.|.+...+|+.+ .+|.||+|+
T Consensus 69 ~~~~~v~~~~-~~v~~i~~--~~~~~~v~~~~g~~~-~~~~vv~At 110 (311)
T 2q0l_A 69 CFRFGLKHEM-TAVQRVSK--KDSHFVILAEDGKTF-EAKSVIIAT 110 (311)
T ss_dssp HHTTSCEEEC-SCEEEEEE--ETTEEEEEETTSCEE-EEEEEEECC
T ss_pred HHHcCCEEEE-EEEEEEEE--cCCEEEEEEcCCCEE-ECCEEEECC
Confidence 3445777887 78999987 556788877777654 799999995
No 113
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=70.70 E-value=4.3 Score=37.74 Aligned_cols=42 Identities=10% Similarity=0.000 Sum_probs=30.7
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEcc--CC--CccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL--DG--QSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~--~g--~~~~~~d~VVla~ 131 (326)
+..+++|+++++|.+|+. +++++.+... +| +.+ .+|.||+|+
T Consensus 227 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~g~~~~i-~~D~vv~a~ 272 (468)
T 2qae_A 227 KNEKMKFMTSTKVVGGTN--NGDSVSLEVEGKNGKRETV-TCEALLVSV 272 (468)
T ss_dssp HHTCCEEECSCEEEEEEE--CSSSEEEEEECC---EEEE-EESEEEECS
T ss_pred hcCCcEEEeCCEEEEEEE--cCCeEEEEEEcCCCceEEE-ECCEEEECC
Confidence 446788999999999987 5556777654 55 343 799999994
No 114
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=70.33 E-value=3.6 Score=36.63 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=29.0
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.++++++||. +.|.++.-|+.||..||+.|.+.+
T Consensus 276 ~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l 315 (397)
T 3oz2_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAI 315 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 4689999997 357789999999999999998765
No 115
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=69.98 E-value=5.7 Score=32.98 Aligned_cols=35 Identities=17% Similarity=0.005 Sum_probs=29.9
Q ss_pred cCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhh
Q 020469 289 VKRRLAICGDFCVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 289 ~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
..++||+|||-...+....|+.+|+.+|+.|...|
T Consensus 197 ~~p~iya~G~~a~~g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 197 RLEGLYAVGLCVREGDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TSBSEEECGGGTSCCCHHHHHHHHHHHHHHHHHHC
T ss_pred ccccceeeeecccCccHHHHHHHHHHHHHHHHhhc
Confidence 56789999998744578888999999999998876
No 116
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=69.88 E-value=4.7 Score=34.35 Aligned_cols=38 Identities=8% Similarity=-0.129 Sum_probs=29.3
Q ss_pred CCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 90 GVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++++. +++|.+|.+ ++++|.+.+.+|+.+ .||.||+|+
T Consensus 71 ~v~~~-~~~v~~i~~--~~~~~~v~~~~g~~~-~~d~vviAt 108 (297)
T 3fbs_A 71 TIHWV-EGRVTDAKG--SFGEFIVEIDGGRRE-TAGRLILAM 108 (297)
T ss_dssp TEEEE-ESCEEEEEE--ETTEEEEEETTSCEE-EEEEEEECC
T ss_pred CeEEE-EeEEEEEEE--cCCeEEEEECCCCEE-EcCEEEECC
Confidence 34443 569999987 567799998888654 799999995
No 117
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=68.94 E-value=3.4 Score=38.70 Aligned_cols=45 Identities=7% Similarity=-0.111 Sum_probs=32.3
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeEEEccC----CCccccccEEEecc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD----GQSLGQFNGVVASD 131 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~----g~~~~~~d~VVla~ 131 (326)
...+..+++++++++|.+|+. ++++..+...+ |+.+ .+|.||+|+
T Consensus 234 ~~l~~~gV~i~~~~~v~~i~~--~~~~~~v~~~~~~~~g~~~-~~D~vv~a~ 282 (482)
T 1ojt_A 234 KQNEYRFDNIMVNTKTVAVEP--KEDGVYVTFEGANAPKEPQ-RYDAVLVAA 282 (482)
T ss_dssp HHHGGGEEEEECSCEEEEEEE--ETTEEEEEEESSSCCSSCE-EESCEEECC
T ss_pred HHHHhcCCEEEECCEEEEEEE--cCCeEEEEEeccCCCceEE-EcCEEEECc
Confidence 333445688999999999986 44556666555 5544 699999994
No 118
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=68.84 E-value=5.8 Score=34.47 Aligned_cols=38 Identities=21% Similarity=0.067 Sum_probs=32.2
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhcc
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
...++||.|||-..+ ..+..|+.+|..+|..|...|..
T Consensus 297 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 297 TSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHHhc
Confidence 456799999998753 68999999999999999988754
No 119
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=68.26 E-value=5.3 Score=37.56 Aligned_cols=40 Identities=25% Similarity=0.325 Sum_probs=30.8
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEcc---CCC--ccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ--SLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g~--~~~~~d~VVla~ 131 (326)
.|++|+++++|.+|.. +++.|.|.+. +|+ .+ .+|.||+|+
T Consensus 162 ~Gv~i~~~~~V~~l~~--~~~~~~V~~~d~~~G~~~~i-~A~~VV~At 206 (501)
T 2qcu_A 162 KGGEVLTRTRATSARR--ENGLWIVEAEDIDTGKKYSW-QARGLVNAT 206 (501)
T ss_dssp TTCEEECSEEEEEEEE--ETTEEEEEEEETTTCCEEEE-EESCEEECC
T ss_pred cCCEEEcCcEEEEEEE--eCCEEEEEEEECCCCCEEEE-ECCEEEECC
Confidence 4788999999999987 4566888763 564 33 789999993
No 120
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=67.60 E-value=5.5 Score=34.22 Aligned_cols=38 Identities=21% Similarity=0.084 Sum_probs=31.7
Q ss_pred ccCCCeEEeeCCCC--CCChhHHHHHHHHHHHHHHhhhcc
Q 020469 288 DVKRRLAICGDFCV--SPNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 288 ~~~~~l~~aGD~~~--g~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
...++||.|||-.. ...+..|+..|..+|..|...|..
T Consensus 274 t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 313 (315)
T 3r9u_A 274 TSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIES 313 (315)
T ss_dssp CSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHh
Confidence 45679999999863 358999999999999999987753
No 121
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=67.50 E-value=6.8 Score=35.05 Aligned_cols=44 Identities=14% Similarity=0.075 Sum_probs=32.8
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
|.+.+.+ .+++|+++++|.+|+. ++ .|.+.+|+.+ .+|.||.|+
T Consensus 113 L~~~~~~-~gv~i~~~~~v~~i~~----~~-~v~~~~g~~~-~ad~vV~Ad 156 (379)
T 3alj_A 113 LVNRARA-LGVDISVNSEAVAADP----VG-RLTLQTGEVL-EADLIVGAD 156 (379)
T ss_dssp HHHHHHH-TTCEEESSCCEEEEET----TT-EEEETTSCEE-ECSEEEECC
T ss_pred HHHHHHh-cCCEEEeCCEEEEEEe----CC-EEEECCCCEE-EcCEEEECC
Confidence 4444433 4788999999999974 34 7777778654 799999995
No 122
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=67.49 E-value=5 Score=37.36 Aligned_cols=43 Identities=19% Similarity=0.246 Sum_probs=31.5
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCC---CccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG---QSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g---~~~~~~d~VVla~ 131 (326)
.+..+++++++++|.+|+. ++++..+...++ +. ..+|.||+|+
T Consensus 231 l~~~Gv~v~~~~~v~~i~~--~~~~~~v~~~~~~g~~~-~~~D~vi~a~ 276 (476)
T 3lad_A 231 LTKQGLKILLGARVTGTEV--KNKQVTVKFVDAEGEKS-QAFDKLIVAV 276 (476)
T ss_dssp HHHTTEEEEETCEEEEEEE--CSSCEEEEEESSSEEEE-EEESEEEECS
T ss_pred HHhCCCEEEECCEEEEEEE--cCCEEEEEEEeCCCcEE-EECCEEEEee
Confidence 3445788999999999987 556666665543 33 3799999994
No 123
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=67.46 E-value=4.7 Score=33.52 Aligned_cols=38 Identities=13% Similarity=0.005 Sum_probs=28.2
Q ss_pred CCeeEcceeEeeEEeecCCCC-eEEEccCCCccccccEEEecc
Q 020469 90 GVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~~~~~~d~VVla~ 131 (326)
+++++ +++|.+|.. ++++ |.+.+.+|+.+ .+|.||+|+
T Consensus 83 gv~i~-~~~v~~i~~--~~~~v~~v~~~~g~~i-~a~~VV~A~ 121 (232)
T 2cul_A 83 PLHLF-QATATGLLL--EGNRVVGVRTWEGPPA-RGEKVVLAV 121 (232)
T ss_dssp TEEEE-ECCEEEEEE--ETTEEEEEEETTSCCE-ECSEEEECC
T ss_pred CcEEE-EeEEEEEEE--eCCEEEEEEECCCCEE-ECCEEEECC
Confidence 66777 679999986 3444 56777777654 799999994
No 124
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=67.14 E-value=6.1 Score=34.33 Aligned_cols=42 Identities=10% Similarity=0.180 Sum_probs=32.1
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEcc---CCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g~~~~~~d~VVla~ 131 (326)
++..++++++++ |.+|.. +++.|.+.+. ++..+ .+|.||+|+
T Consensus 94 ~~~~gv~i~~~~-v~~i~~--~~~~~~v~~~~~~~~~~~-~~d~vvlAt 138 (338)
T 3itj_A 94 STKFGTEIITET-VSKVDL--SSKPFKLWTEFNEDAEPV-TTDAIILAT 138 (338)
T ss_dssp HHHTTCEEECSC-EEEEEC--SSSSEEEEETTCSSSCCE-EEEEEEECC
T ss_pred HHHcCCEEEEeE-EEEEEE--cCCEEEEEEEecCCCcEE-EeCEEEECc
Confidence 334578899998 999987 6778988763 45444 799999994
No 125
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=66.72 E-value=7.1 Score=33.85 Aligned_cols=38 Identities=18% Similarity=0.127 Sum_probs=32.0
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhcc
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
...++||++||-..+ ..+..|+..|..+|..|...|..
T Consensus 278 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 317 (319)
T 3cty_A 278 TSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSIS 317 (319)
T ss_dssp CSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhc
Confidence 456789999998765 57899999999999999888753
No 126
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=66.52 E-value=6.6 Score=33.77 Aligned_cols=37 Identities=19% Similarity=0.146 Sum_probs=31.0
Q ss_pred ccCCCeEEeeCCCCCC--ChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVSP--NVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~--~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||.+||-...+ .+..|+..|..+|..|...|.
T Consensus 267 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 305 (310)
T 1fl2_A 267 TNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 305 (310)
T ss_dssp CSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHH
Confidence 4567899999987654 689999999999999988764
No 127
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=65.83 E-value=9.1 Score=35.89 Aligned_cols=39 Identities=15% Similarity=0.037 Sum_probs=30.5
Q ss_pred CCCeeEcceeEeeEEeecCCCC--eEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++++ +|.+|.. ++++ +.|.+.+|+.+ .+|.||.|+
T Consensus 186 ~gv~~~~~-~v~~i~~--~~~~~~~~v~~~~g~~~-~ad~vV~A~ 226 (511)
T 2weu_A 186 RGVRHVVD-DVQHVGQ--DERGWISGVHTKQHGEI-SGDLFVDCT 226 (511)
T ss_dssp TTCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEE-ECSEEEECC
T ss_pred CCCEEEEC-eEeEEEE--cCCCCEEEEEECCCCEE-EcCEEEECC
Confidence 57889999 9999986 4444 67777778654 799999994
No 128
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=65.51 E-value=6.8 Score=36.90 Aligned_cols=54 Identities=11% Similarity=0.039 Sum_probs=36.5
Q ss_pred chHHHHHHhcCCCCeeEcceeEeeEEeecCC------CCeEEEccCCCc----cccccEEEecc
Q 020469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDK------NLWSVSGLDGQS----LGQFNGVVASD 131 (326)
Q Consensus 78 m~~l~~~La~~l~~~i~~~~~V~~i~~~~~~------~~w~l~~~~g~~----~~~~d~VVla~ 131 (326)
+..-.+..|+.++..|+++++|++|++...+ +.|.|++.+++. .-.++.||+|+
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlat 210 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAI 210 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECc
Confidence 3344455567777679999999999874322 249998765421 12689999995
No 129
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=65.14 E-value=5 Score=34.98 Aligned_cols=37 Identities=19% Similarity=0.034 Sum_probs=31.0
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||+|||-... ..+..|+..|..+|..|...|.
T Consensus 285 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 323 (333)
T 1vdc_A 285 TSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDAEHYLQ 323 (333)
T ss_dssp CSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHHHHHHH
Confidence 356799999998765 5788999999999999988764
No 130
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=64.91 E-value=7.7 Score=36.40 Aligned_cols=52 Identities=13% Similarity=0.243 Sum_probs=37.1
Q ss_pred CCchHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 76 PGMNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 76 ~Gm~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+|...+-+.| +..+++|++++.|.+|.. +++...+.+.+|+.+ .+|.||++.
T Consensus 258 gG~~gle~~l-~~~GV~v~~~~~v~~i~~--~~~v~~v~~~~g~~i-~aD~Vv~a~ 309 (493)
T 1y56_A 258 SKADEVIQEL-ERWGIDYVHIPNVKRVEG--NEKVERVIDMNNHEY-KVDALIFAD 309 (493)
T ss_dssp TTHHHHHHHH-HHHTCEEEECSSEEEEEC--SSSCCEEEETTCCEE-ECSEEEECC
T ss_pred CCHHHHHHHH-HhCCcEEEeCCeeEEEec--CCceEEEEeCCCeEE-EeCEEEECC
Confidence 4455554444 346788999999999985 444456667777654 799999993
No 131
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=64.87 E-value=7.1 Score=36.97 Aligned_cols=45 Identities=9% Similarity=0.096 Sum_probs=34.1
Q ss_pred hcCCCCeeEcceeEeeEEeecC-CCCeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLED-KNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~-~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++..+++++++++|.+|.+... ++.|.|.+++|..+ .+|.||+|+
T Consensus 277 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~-~~d~vVlAt 322 (521)
T 1hyu_A 277 VSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVL-KARSIIIAT 322 (521)
T ss_dssp HHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEE-EEEEEEECC
T ss_pred HHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEE-EcCEEEECC
Confidence 3446788999999999975111 34799988888654 799999995
No 132
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=64.74 E-value=7.5 Score=36.58 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=31.0
Q ss_pred CCCeeEcceeEeeEEeec-CCCCeEEEc--c-CC--CccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLE-DKNLWSVSG--L-DG--QSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~-~~~~w~l~~--~-~g--~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.... +++.|.|.. . +| ..+ .+|.||+|+
T Consensus 179 ~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i-~ad~VV~A~ 226 (497)
T 2bry_A 179 LGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASY-EFDVLISAA 226 (497)
T ss_dssp TTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTC-CBSEEEECC
T ss_pred CCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEE-EcCEEEECC
Confidence 578899999999998621 245788876 3 55 233 799999995
No 133
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=63.95 E-value=6.8 Score=36.02 Aligned_cols=45 Identities=29% Similarity=0.311 Sum_probs=31.8
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCe-EEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~g~~~~~~d~VVla~ 131 (326)
++..+++++++++|.+|....+++++ .+.+.+|+.+ .+|.||+++
T Consensus 201 l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i-~~D~Vv~a~ 246 (431)
T 1q1r_A 201 HREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRL-PADLVIAGI 246 (431)
T ss_dssp HHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEE-ECSEEEECC
T ss_pred HHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEE-EcCEEEECC
Confidence 33457889999999999741012333 6777788654 799999993
No 134
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=63.93 E-value=7.9 Score=35.72 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=28.8
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+++.++||. +.|.++.-|+++|..+|+.|...+
T Consensus 281 ~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l 320 (453)
T 3atr_A 281 WNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAF 320 (453)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHH
Confidence 4689999997 457799999999999999997654
No 135
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=63.77 E-value=6 Score=36.69 Aligned_cols=42 Identities=21% Similarity=0.147 Sum_probs=30.9
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEcc-CC--CccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL-DG--QSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~g--~~~~~~d~VVla~ 131 (326)
+..+++++++++|.+|+. ++++..+... +| +.+ .+|.||+|+
T Consensus 223 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~g~~~~~-~~D~vv~a~ 267 (464)
T 2a8x_A 223 KKLGVTILTATKVESIAD--GGSQVTVTVTKDGVAQEL-KAEKVLQAI 267 (464)
T ss_dssp HHHTCEEECSCEEEEEEE--CSSCEEEEEESSSCEEEE-EESEEEECS
T ss_pred HHcCCEEEeCcEEEEEEE--cCCeEEEEEEcCCceEEE-EcCEEEECC
Confidence 345788999999999986 5555666654 45 333 799999994
No 136
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=63.62 E-value=6.7 Score=36.38 Aligned_cols=43 Identities=14% Similarity=0.105 Sum_probs=31.0
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEcc---CC--CccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DG--QSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g--~~~~~~d~VVla~ 131 (326)
.+..+++|+++++|.+|.. +++++.+... +| +.+ .+|.||+|+
T Consensus 228 l~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~-~~D~vv~a~ 275 (470)
T 1dxl_A 228 LEKQGMKFKLKTKVVGVDT--SGDGVKLTVEPSAGGEQTII-EADVVLVSA 275 (470)
T ss_dssp HHHSSCCEECSEEEEEEEC--SSSSEEEEEEESSSCCCEEE-EESEEECCC
T ss_pred HHHcCCEEEeCCEEEEEEE--cCCeEEEEEEecCCCcceEE-ECCEEEECC
Confidence 3345788999999999986 5555666543 44 333 799999994
No 137
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=62.86 E-value=8.8 Score=36.57 Aligned_cols=38 Identities=24% Similarity=0.168 Sum_probs=29.7
Q ss_pred CCeeEcceeEeeEEeecCCCC--eEEEccCCCccccccEEEecc
Q 020469 90 GVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~~--w~l~~~~g~~~~~~d~VVla~ 131 (326)
+++++++ +|++|.. ++++ +.|.+.+|+.+ .+|.||.|+
T Consensus 209 Gv~i~~~-~V~~i~~--~~~g~~~~v~~~~G~~i-~ad~vI~A~ 248 (550)
T 2e4g_A 209 GVRHVED-RVEHVQR--DANGNIESVRTATGRVF-DADLFVDCS 248 (550)
T ss_dssp CCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEE-ECSEEEECC
T ss_pred CcEEEEC-eEeEEEE--cCCCCEEEEEECCCCEE-ECCEEEECC
Confidence 7889999 9999986 4444 56777777654 799999994
No 138
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=62.62 E-value=6.5 Score=36.29 Aligned_cols=44 Identities=18% Similarity=0.129 Sum_probs=31.4
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeE-EEccCCCccccccEEEecc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~ 131 (326)
...+..+++|+++++|.+|.. +++++. +.. +|+.+ .+|.||+|+
T Consensus 199 ~~l~~~Gv~i~~~~~v~~i~~--~~~~v~~v~~-~g~~i-~~D~vv~a~ 243 (452)
T 2cdu_A 199 KDYEAHGVNLVLGSKVAAFEE--VDDEIITKTL-DGKEI-KSDIAILCI 243 (452)
T ss_dssp HHHHHTTCEEEESSCEEEEEE--ETTEEEEEET-TSCEE-EESEEEECC
T ss_pred HHHHHCCCEEEcCCeeEEEEc--CCCeEEEEEe-CCCEE-ECCEEEECc
Confidence 334446789999999999985 344454 444 66554 799999994
No 139
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=62.03 E-value=7.6 Score=33.52 Aligned_cols=38 Identities=16% Similarity=0.014 Sum_probs=31.6
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhcc
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
...++||++||-... ..+..|+.+|..+|..|...|..
T Consensus 276 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 276 TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp CSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHh
Confidence 345789999998764 47889999999999999988753
No 140
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=61.81 E-value=7.4 Score=35.71 Aligned_cols=30 Identities=10% Similarity=-0.041 Sum_probs=23.1
Q ss_pred CCeEEeeCCCCCCChhHHHHHHHHHHHHHHh
Q 020469 291 RRLAICGDFCVSPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 291 ~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~ 321 (326)
.+|+++. .+.|.++--|...|+.+|+.|..
T Consensus 388 ~~l~~a~-G~~g~G~~~ap~~g~~la~~i~~ 417 (448)
T 3axb_A 388 SGIVVAA-GTSGSGIMKSDSIGRVAAAVALG 417 (448)
T ss_dssp CSEEEEE-CCTTCCGGGHHHHHHHHHHHHTT
T ss_pred CCEEEEE-CCCchhHhHhHHHHHHHHHHHcC
Confidence 6777663 34567888999999999998865
No 141
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=61.50 E-value=8 Score=33.13 Aligned_cols=50 Identities=20% Similarity=0.103 Sum_probs=35.0
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCC---eEEEccCCC--ccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNL---WSVSGLDGQ--SLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~---w~l~~~~g~--~~~~~d~VVla~ 131 (326)
..+.+.+.+..+++++++++|.+|.. ++++ ..+...+|+ .+ .+|.||++.
T Consensus 186 ~~~~~~~~~~~gv~~~~~~~v~~i~~--~~~~~~~v~~~~~~g~~~~~-~~D~vv~a~ 240 (315)
T 3r9u_A 186 PSTVEKVKKNEKIELITSASVDEVYG--DKMGVAGVKVKLKDGSIRDL-NVPGIFTFV 240 (315)
T ss_dssp HHHHHHHHHCTTEEEECSCEEEEEEE--ETTEEEEEEEECTTSCEEEE-CCSCEEECS
T ss_pred HHHHHHHHhcCCeEEEeCcEEEEEEc--CCCcEEEEEEEcCCCCeEEe-ecCeEEEEE
Confidence 45566676667888999999999986 3322 344434674 33 799999994
No 142
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=61.45 E-value=8.9 Score=32.98 Aligned_cols=39 Identities=26% Similarity=0.184 Sum_probs=30.9
Q ss_pred eccCCCeEEeeCCCCCC--ChhHHHHHHHHHHHHHHhhhcc
Q 020469 287 WDVKRRLAICGDFCVSP--NVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g~--~vegA~~SG~~aA~~l~~~l~~ 325 (326)
.+..++||.|||-..++ .+--|+.+|..||..+.+.|+.
T Consensus 273 ~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~ 313 (314)
T 4a5l_A 273 KTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQT 313 (314)
T ss_dssp BCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 34567899999987665 3667889999999999888754
No 143
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=61.39 E-value=9.4 Score=29.93 Aligned_cols=36 Identities=17% Similarity=-0.055 Sum_probs=29.9
Q ss_pred ccCCCeEEeeCCCCCC--ChhHHHHHHHHHHHHHHhhh
Q 020469 288 DVKRRLAICGDFCVSP--NVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~--~vegA~~SG~~aA~~l~~~l 323 (326)
...++||.+||-.... .+..|+..|..+|..|...+
T Consensus 133 t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 133 TSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp CSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHh
Confidence 4567899999987654 77899999999999998765
No 144
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=61.09 E-value=6.5 Score=39.59 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=30.4
Q ss_pred CCCeeEcceeEeeEEeecCCCCe-EEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLW-SVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w-~l~~~~g~~~~~~d~VVla~ 131 (326)
.|++|+++++|++|.. +++++ .|.+.+| .+ .+|.||+|+
T Consensus 164 ~Gv~i~~~t~V~~i~~--~~~~v~~V~t~~G-~i-~Ad~VV~Aa 203 (830)
T 1pj5_A 164 AGVTYRGSTTVTGIEQ--SGGRVTGVQTADG-VI-PADIVVSCA 203 (830)
T ss_dssp TTCEEECSCCEEEEEE--ETTEEEEEEETTE-EE-ECSEEEECC
T ss_pred cCCEEECCceEEEEEE--eCCEEEEEEECCc-EE-ECCEEEECC
Confidence 4788999999999987 44554 5777777 33 799999994
No 145
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=60.85 E-value=12 Score=35.71 Aligned_cols=44 Identities=9% Similarity=0.029 Sum_probs=30.1
Q ss_pred CCCeeEcceeEeeEEeecCC-CC---eEEEccCCCc-cccccEEEeccCCC
Q 020469 89 PGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKNV 134 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~-~~---w~l~~~~g~~-~~~~d~VVla~~~~ 134 (326)
.+++|+++++|.+|.. ++ ++ +.+...+|+. ...+|.||+|+-+.
T Consensus 268 ~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~ 316 (571)
T 1y0p_A 268 RNIDLRMNTRGIEVLK--DDKGTVKGILVKGMYKGYYWVKADAVILATGGF 316 (571)
T ss_dssp TTCEEESSEEEEEEEE--CTTSCEEEEEEEETTTEEEEEECSEEEECCCCC
T ss_pred cCCEEEeCCEeeEeEE--cCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCc
Confidence 5789999999999987 44 43 3344335641 13789999996543
No 146
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=60.65 E-value=9.7 Score=36.39 Aligned_cols=52 Identities=15% Similarity=0.162 Sum_probs=33.5
Q ss_pred HHHHHHhcCCCCeeEcceeEeeEEeecCC-CC---eEEEccCCCc-cccccEEEeccCCC
Q 020469 80 SICKALCHQPGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKNV 134 (326)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~-~~---w~l~~~~g~~-~~~~d~VVla~~~~ 134 (326)
.|.+.+. ..+++|+++++|.+|.. ++ ++ +.+...+|+. ...+|.||+|+-+.
T Consensus 255 ~L~~~~~-~~gv~i~~~~~v~~l~~--~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~ 311 (566)
T 1qo8_A 255 TLRKAAK-EQGIDTRLNSRVVKLVV--NDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGY 311 (566)
T ss_dssp HHHHHHH-HTTCCEECSEEEEEEEE--CTTSBEEEEEEEETTTEEEEEEEEEEEECCCCC
T ss_pred HHHHHHH-hcCCEEEeCCEEEEEEE--CCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCc
Confidence 3344433 34788999999999987 44 43 4444346641 13689999996543
No 147
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=60.63 E-value=6.1 Score=36.68 Aligned_cols=41 Identities=10% Similarity=0.165 Sum_probs=31.1
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..+++|+++++|.+|.. +++.+.+.++++ .+ .+|.||+|+
T Consensus 227 ~~~Gv~i~~~~~v~~i~~--~~~~~~v~~~~~-~i-~aD~Vv~a~ 267 (467)
T 1zk7_A 227 RAEGIEVLEHTQASQVAH--MDGEFVLTTTHG-EL-RADKLLVAT 267 (467)
T ss_dssp HHTTCEEETTCCEEEEEE--ETTEEEEEETTE-EE-EESEEEECS
T ss_pred HhCCCEEEcCCEEEEEEE--eCCEEEEEECCc-EE-EcCEEEECC
Confidence 345788999999999986 455677766543 43 799999994
No 148
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=60.38 E-value=5.5 Score=36.82 Aligned_cols=42 Identities=14% Similarity=0.043 Sum_probs=30.3
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEcc---CCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g~~~~~~d~VVla~ 131 (326)
+..+++++++++|.+|+. +++++.+... +++.+ .+|.||+|+
T Consensus 222 ~~~gv~i~~~~~v~~i~~--~~~~~~v~~~~~g~~~~~-~~D~vv~a~ 266 (455)
T 1ebd_A 222 KKKGVEVVTNALAKGAEE--REDGVTVTYEANGETKTI-DADYVLVTV 266 (455)
T ss_dssp HHTTCEEEESEEEEEEEE--ETTEEEEEEEETTEEEEE-EESEEEECS
T ss_pred HHCCCEEEeCCEEEEEEE--eCCeEEEEEEeCCceeEE-EcCEEEECc
Confidence 345788999999999986 4455666543 33443 799999994
No 149
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=59.98 E-value=7.7 Score=36.89 Aligned_cols=58 Identities=12% Similarity=0.180 Sum_probs=38.6
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeec-----------------CCCCeEEEccCCCccccccEEEeccCCCCCcch
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLE-----------------DKNLWSVSGLDGQSLGQFNGVVASDKNVVSPRF 139 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~-----------------~~~~w~l~~~~g~~~~~~d~VVla~~~~pap~~ 139 (326)
..+..++..+++++++++|.+|.... .++++.+...+|+.+ .+|.||+|+-..|...+
T Consensus 197 ~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i-~~D~vi~a~G~~p~~~l 271 (565)
T 3ntd_A 197 FAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELL-ETDLLIMAIGVRPETQL 271 (565)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEE-EESEEEECSCEEECCHH
T ss_pred HHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEE-EcCEEEECcCCccchHH
Confidence 33334445678899999999997510 244566777777654 79999999544444333
No 150
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=59.07 E-value=9.4 Score=32.91 Aligned_cols=41 Identities=7% Similarity=0.185 Sum_probs=30.8
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++..++++++++ |..|.. +++.|.+ ..+|..+ .||+||+|+
T Consensus 72 ~~~~~~~~~~~~-v~~i~~--~~~~~~v-~~~~~~~-~~~~lv~At 112 (320)
T 1trb_A 72 ATKFETEIIFDH-INKVDL--QNRPFRL-NGDNGEY-TCDALIIAT 112 (320)
T ss_dssp HHHTTCEEECCC-EEEEEC--SSSSEEE-EESSCEE-EEEEEEECC
T ss_pred HHHCCCEEEEee-eeEEEe--cCCEEEE-EeCCCEE-EcCEEEECC
Confidence 334567888886 999987 6678988 5566554 799999994
No 151
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=58.66 E-value=14 Score=34.93 Aligned_cols=39 Identities=13% Similarity=0.148 Sum_probs=30.0
Q ss_pred CCCeeEcceeEeeEEeecCCCC--eEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNL--WSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++.+ +|.+|.. ++++ +.|.+.+|+.+ .+|.||.|+
T Consensus 178 ~gv~~~~~-~v~~i~~--~~~g~~~~v~~~~g~~i-~ad~vV~A~ 218 (538)
T 2aqj_A 178 RGVNRVVD-EVVDVRL--NNRGYISNLLTKEGRTL-EADLFIDCS 218 (538)
T ss_dssp TTCEEEEC-CEEEEEE--CTTSCEEEEEETTSCEE-CCSEEEECC
T ss_pred CCCEEEEe-eEeEEEE--cCCCcEEEEEECCCcEE-EeCEEEECC
Confidence 57889999 8999987 4343 57777777544 799999994
No 152
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=58.57 E-value=16 Score=31.52 Aligned_cols=51 Identities=14% Similarity=0.045 Sum_probs=33.9
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEcc---CCC-ccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ-SLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g~-~~~~~d~VVla~ 131 (326)
..+.+.|.+..+++|+++++|.+|.. +++...+... +|+ ....+|.||+|+
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 245 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVFIFI 245 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECS
T ss_pred hHHHHHHHhcCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEEEcc
Confidence 44566776656788999999999986 4332234332 564 123799999993
No 153
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=58.41 E-value=3.3 Score=37.45 Aligned_cols=39 Identities=13% Similarity=0.033 Sum_probs=31.6
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEec
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla 130 (326)
.+++++++++|..++. +++.-.+.+++|+.+ .+|.||++
T Consensus 215 ~gi~v~~~~~v~~v~~--~~~~~~v~~~~g~~i-~~D~vi~~ 253 (401)
T 3vrd_B 215 ALIEWHPGPDAAVVKT--DTEAMTVETSFGETF-KAAVINLI 253 (401)
T ss_dssp CSEEEECTTTTCEEEE--ETTTTEEEETTSCEE-ECSEEEEC
T ss_pred cCcEEEeCceEEEEEe--cccceEEEcCCCcEE-EeeEEEEe
Confidence 4578999999999986 555667878888765 89999998
No 154
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=58.41 E-value=7.5 Score=34.35 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=31.0
Q ss_pred CCC-CeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPG-VESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+ ++++++++|.+|.. +++.+.+.+.+|+.+..+|.||+++
T Consensus 226 ~~g~v~~~~~~~v~~i~~--~~~~~~v~~~~g~~~~~~d~vi~a~ 268 (369)
T 3d1c_A 226 QGARIEMNVHYTVKDIDF--NNGQYHISFDSGQSVHTPHEPILAT 268 (369)
T ss_dssp TTCCEEEECSCCEEEEEE--ETTEEEEEESSSCCEEESSCCEECC
T ss_pred hCCcEEEecCcEEEEEEe--cCCceEEEecCCeEeccCCceEEee
Confidence 344 78999999999975 4456777777886543469999983
No 155
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=58.04 E-value=9.6 Score=33.11 Aligned_cols=39 Identities=10% Similarity=0.174 Sum_probs=30.8
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..++++++++ |.+|.. +++.|.|.+ +|..+ .+|.||+|+
T Consensus 82 ~~gv~~~~~~-v~~i~~--~~~~~~v~~-~~~~~-~~~~vv~A~ 120 (333)
T 1vdc_A 82 RFGTTIFTET-VTKVDF--SSKPFKLFT-DSKAI-LADAVILAI 120 (333)
T ss_dssp HTTCEEECCC-CCEEEC--SSSSEEEEC-SSEEE-EEEEEEECC
T ss_pred HCCCEEEEeE-EEEEEE--cCCEEEEEE-CCcEE-EcCEEEECC
Confidence 3567888887 999987 667899987 66554 799999995
No 156
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=57.92 E-value=8.8 Score=34.92 Aligned_cols=40 Identities=28% Similarity=0.412 Sum_probs=31.0
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..+++++++++|.+|.. + .+.|...+|+.+ .||.||+|+
T Consensus 70 ~~~~v~~~~~~~v~~i~~--~--~~~v~~~~g~~~-~~d~lviAt 109 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDP--Q--AHTVALSDGRTL-PYGTLVLAT 109 (408)
T ss_dssp TSCSCEEEETCCEEEEET--T--TTEEEETTSCEE-ECSEEEECC
T ss_pred HHCCCEEEcCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEECC
Confidence 445678999999999975 3 467777777654 799999995
No 157
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=57.89 E-value=11 Score=32.69 Aligned_cols=37 Identities=19% Similarity=0.108 Sum_probs=31.0
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||++||-... ..+..|+..|..+|..|...|.
T Consensus 274 t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 312 (325)
T 2q7v_A 274 TNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLA 312 (325)
T ss_dssp CSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346789999998764 5789999999999999988764
No 158
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=57.84 E-value=12 Score=34.83 Aligned_cols=47 Identities=11% Similarity=0.242 Sum_probs=34.1
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEc-cCCC--ccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ--SLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~--~~~~~d~VVla~ 131 (326)
.+.+.+..+++++++++|..|.. +++.+.+.. .+|+ .+ .||.||+|+
T Consensus 99 ~~~~~~~~gv~~~~~~~v~~i~~--~~~~v~v~~~~~g~~~~~-~~d~lviAt 148 (480)
T 3cgb_A 99 VKTFRDKYGIDAKVRHEVTKVDT--EKKIVYAEHTKTKDVFEF-SYDRLLIAT 148 (480)
T ss_dssp HHHHHHTTCCEEESSEEEEEEET--TTTEEEEEETTTCCEEEE-ECSEEEECC
T ss_pred HHHHHhhcCCEEEeCCEEEEEEC--CCCEEEEEEcCCCceEEE-EcCEEEECC
Confidence 34454555778999999999986 566677765 3464 33 799999995
No 159
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=57.66 E-value=7.2 Score=36.81 Aligned_cols=52 Identities=12% Similarity=0.163 Sum_probs=33.1
Q ss_pred chHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCc---cccccEEEecc
Q 020469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQS---LGQFNGVVASD 131 (326)
Q Consensus 78 m~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~---~~~~d~VVla~ 131 (326)
++..++...+..|++|+++++|.+|+. ++........+|+. ...+|.||.|+
T Consensus 274 ~~~~~~~~L~~~GV~v~~~~~v~~v~~--~~~~~~~~~~dg~~~~~~i~ad~viwa~ 328 (502)
T 4g6h_A 274 LSSYAQSHLENTSIKVHLRTAVAKVEE--KQLLAKTKHEDGKITEETIPYGTLIWAT 328 (502)
T ss_dssp HHHHHHHHHHHTTCEEETTEEEEEECS--SEEEEEEECTTSCEEEEEEECSEEEECC
T ss_pred HHHHHHHHHHhcceeeecCceEEEEeC--CceEEEEEecCcccceeeeccCEEEEcc
Confidence 444455555667899999999999964 22222233455531 13799999884
No 160
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=57.56 E-value=7.9 Score=36.19 Aligned_cols=44 Identities=16% Similarity=0.072 Sum_probs=30.9
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccC---CC-ccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---g~-~~~~~d~VVla~ 131 (326)
.+..+++|+++++|.+|.. +++++.+...+ |+ ....+|.||+|+
T Consensus 249 l~~~gV~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~ 296 (491)
T 3urh_A 249 LTKQGIDFKLGAKVTGAVK--SGDGAKVTFEPVKGGEATTLDAEVVLIAT 296 (491)
T ss_dssp HHHTTCEEECSEEEEEEEE--ETTEEEEEEEETTSCCCEEEEESEEEECC
T ss_pred HHhCCCEEEECCeEEEEEE--eCCEEEEEEEecCCCceEEEEcCEEEEee
Confidence 3445788999999999987 55566665542 42 223799999994
No 161
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=57.11 E-value=10 Score=32.68 Aligned_cols=37 Identities=11% Similarity=0.150 Sum_probs=30.3
Q ss_pred ccCCCeEEeeCCC----CCCChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFC----VSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~----~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||.|||-. ....+..|+..|..+|+.|...+.
T Consensus 275 t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~ 315 (332)
T 3lzw_A 275 TNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMD 315 (332)
T ss_dssp CSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred eecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhhC
Confidence 3567899999985 234689999999999999988764
No 162
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=56.81 E-value=16 Score=34.40 Aligned_cols=39 Identities=8% Similarity=-0.077 Sum_probs=29.2
Q ss_pred CCCeeEcceeEeeEEeecCCCCe--EEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLW--SVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w--~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++++ +|.+|.. +++++ .|.+.+|+.+ .+|.||.|+
T Consensus 189 ~Gv~i~~~-~v~~i~~--~~~g~~~~v~~~~g~~i-~ad~vV~Ad 229 (526)
T 2pyx_A 189 LGVTHIRD-HVSQIIN--NQHGDIEKLITKQNGEI-SGQLFIDCT 229 (526)
T ss_dssp SCCEEEEC-CEEEEEE--CTTSCEEEEEESSSCEE-ECSEEEECS
T ss_pred CCCEEEEe-EEEEEEe--cCCCcEEEEEECCCCEE-EcCEEEECC
Confidence 57889999 6999987 44443 5666676554 799999994
No 163
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=56.13 E-value=15 Score=34.41 Aligned_cols=38 Identities=16% Similarity=-0.010 Sum_probs=29.6
Q ss_pred CeeEcceeEeeEEeecCCCCeEEEcc--CC--CccccccEEEecc
Q 020469 91 VESKFGVGVGRFEWLEDKNLWSVSGL--DG--QSLGQFNGVVASD 131 (326)
Q Consensus 91 ~~i~~~~~V~~i~~~~~~~~w~l~~~--~g--~~~~~~d~VVla~ 131 (326)
++|+++++|.+|+. ++++..+... +| +.+ .+|.||+|+
T Consensus 229 V~i~~~~~v~~i~~--~~~~v~v~~~~~~G~~~~i-~~D~Vi~a~ 270 (492)
T 3ic9_A 229 FYFDAKARVISTIE--KEDAVEVIYFDKSGQKTTE-SFQYVLAAT 270 (492)
T ss_dssp SEEETTCEEEEEEE--CSSSEEEEEECTTCCEEEE-EESEEEECS
T ss_pred cEEEECCEEEEEEE--cCCEEEEEEEeCCCceEEE-ECCEEEEee
Confidence 78999999999987 5567777654 56 333 799999994
No 164
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=55.61 E-value=14 Score=34.46 Aligned_cols=44 Identities=14% Similarity=-0.034 Sum_probs=29.5
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEccCCC----ccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ----SLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~----~~~~~d~VVla~ 131 (326)
+..+++|+++++|.+|+. .+++...+...++. ....+|.||+++
T Consensus 238 ~~~Gv~i~~~~~v~~i~~-~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~ 285 (483)
T 3dgh_A 238 EERGIPFLRKTVPLSVEK-QDDGKLLVKYKNVETGEESEDVYDTVLWAI 285 (483)
T ss_dssp HHTTCCEEETEEEEEEEE-CTTSCEEEEEEETTTCCEEEEEESEEEECS
T ss_pred HhCCCEEEeCCEEEEEEE-cCCCcEEEEEecCCCCceeEEEcCEEEECc
Confidence 345788999999999986 12334556554432 123799999994
No 165
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=55.60 E-value=15 Score=35.23 Aligned_cols=45 Identities=18% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCCeeEcceeEeeEEeecCC-CC---eEEEccCCCc-cccccEEEeccCCCC
Q 020469 89 PGVESKFGVGVGRFEWLEDK-NL---WSVSGLDGQS-LGQFNGVVASDKNVV 135 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~-~~---w~l~~~~g~~-~~~~d~VVla~~~~p 135 (326)
.+++|+++++|.+|.. ++ ++ +.+...+|+. ...+|.||+|+-+.+
T Consensus 268 ~gv~i~~~t~v~~l~~--~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 268 RGTDIRLNSRVVRILE--DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp TTCEEESSEEEEEEEE--C--CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred cCCeEEecCEEEEEEE--CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 4789999999999976 43 33 3344335641 136899999975544
No 166
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=55.20 E-value=13 Score=33.83 Aligned_cols=44 Identities=23% Similarity=0.173 Sum_probs=31.9
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+...+..+++++++++|.+|+ + + .+.+.+|+.+ .+|.||+++
T Consensus 192 ~l~~~l~~~GV~i~~~~~v~~i~---~-~--~v~~~~g~~i-~~D~vi~a~ 235 (408)
T 2gqw_A 192 FVARYHAAQGVDLRFERSVTGSV---D-G--VVLLDDGTRI-AADMVVVGI 235 (408)
T ss_dssp HHHHHHHHTTCEEEESCCEEEEE---T-T--EEEETTSCEE-ECSEEEECS
T ss_pred HHHHHHHHcCcEEEeCCEEEEEE---C-C--EEEECCCCEE-EcCEEEECc
Confidence 33344445688999999999997 2 2 5666777654 799999993
No 167
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=54.74 E-value=13 Score=34.28 Aligned_cols=47 Identities=19% Similarity=0.167 Sum_probs=32.2
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+..++..+++++++++|.+|.. +++.+.+.+ +|+.+ .+|.||+|+
T Consensus 196 ~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~~-~~~~i-~~d~vi~a~ 242 (447)
T 1nhp_A 196 VLTEEMEANNITIATGETVERYEG--DGRVQKVVT-DKNAY-DADLVVVAV 242 (447)
T ss_dssp HHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEEE-SSCEE-ECSEEEECS
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEEE-CCCEE-ECCEEEECc
Confidence 333444456788999999999986 433345655 34444 799999994
No 168
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=54.11 E-value=6.5 Score=35.66 Aligned_cols=40 Identities=8% Similarity=0.134 Sum_probs=29.9
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEec
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVAS 130 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla 130 (326)
.+.+..+++++++++|.+|+. ++ +.+++|+.+ .+|.||++
T Consensus 226 ~~l~~~gV~~~~~~~v~~i~~----~~--v~~~~g~~~-~~D~vi~a 265 (409)
T 3h8l_A 226 SIYNQLGIKLVHNFKIKEIRE----HE--IVDEKGNTI-PADITILL 265 (409)
T ss_dssp HHHHHHTCEEECSCCEEEECS----SE--EEETTSCEE-ECSEEEEE
T ss_pred HHHHHCCCEEEcCCceEEECC----Ce--EEECCCCEE-eeeEEEEC
Confidence 334445788999999999964 22 556777664 79999999
No 169
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=54.01 E-value=11 Score=34.93 Aligned_cols=37 Identities=24% Similarity=0.166 Sum_probs=31.1
Q ss_pred ccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||.+||-..++ .+-.|+..|+.+|+.|...|.
T Consensus 407 Ts~~~VfA~GD~~~g~~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 407 TNMDGVFAAGDIVRGASLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp CSSTTEEECGGGGSSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEeccccCCchHHHHHHHHHHHHHHHHHHHhh
Confidence 4567899999987665 689999999999999987763
No 170
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=53.98 E-value=14 Score=35.18 Aligned_cols=37 Identities=19% Similarity=0.115 Sum_probs=28.8
Q ss_pred eEcceeEeeEEeecCCCCeEEEccC---CC-ccccccEEEecc
Q 020469 93 SKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (326)
Q Consensus 93 i~~~~~V~~i~~~~~~~~w~l~~~~---g~-~~~~~d~VVla~ 131 (326)
|+++++|.+|+. ++++|.++..+ |+ ....+|.||.|+
T Consensus 152 v~~~~~v~~~~~--~~~~v~v~~~~~~~G~~~~i~a~~vVgAD 192 (549)
T 2r0c_A 152 LRTRSRLDSFEQ--RDDHVRATITDLRTGATRAVHARYLVACD 192 (549)
T ss_dssp EECSEEEEEEEE--CSSCEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred cccCcEEEEEEE--eCCEEEEEEEECCCCCEEEEEeCEEEECC
Confidence 999999999997 66788887654 53 123799999995
No 171
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=53.71 E-value=14 Score=31.71 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=24.5
Q ss_pred CeEEeeCCC--------CCCChhHHHHHHHHHHHHHHhhhcc
Q 020469 292 RLAICGDFC--------VSPNVEGAILSGLDAASKLTEILSC 325 (326)
Q Consensus 292 ~l~~aGD~~--------~g~~vegA~~SG~~aA~~l~~~l~~ 325 (326)
+++.|||-. .++.+.+|+.||..+|..|.+.|.+
T Consensus 235 ~i~a~G~~~~~~~g~~~~gp~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 235 GMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp TEEECTHHHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEeeehhhhcCCCCcChHHHHHHHhHHHHHHHHHHHhhh
Confidence 466666532 3567888888898888888887754
No 172
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=53.70 E-value=11 Score=35.03 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=30.7
Q ss_pred HhcCCCCeeEcceeEeeEEeecCCCCeEEEcc-----CCCccccccEEEecc
Q 020469 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGL-----DGQSLGQFNGVVASD 131 (326)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~-----~g~~~~~~d~VVla~ 131 (326)
.++..+++|+++++|.+|....+++.+.+... +++.+ .+|.||+|+
T Consensus 233 ~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~-~~D~vv~a~ 283 (478)
T 1v59_A 233 FLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENL-EAEVLLVAV 283 (478)
T ss_dssp HHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEE-EESEEEECS
T ss_pred HHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEE-ECCEEEECC
Confidence 33445788999999999974112344666543 33343 799999994
No 173
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=53.49 E-value=10 Score=33.08 Aligned_cols=39 Identities=13% Similarity=0.014 Sum_probs=30.9
Q ss_pred eeccCCCeEEeeC--CCC--CCChhHHHHHHHHHHHHHHhhhc
Q 020469 286 LWDVKRRLAICGD--FCV--SPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 286 ~~~~~~~l~~aGD--~~~--g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
+....++||++|| ... ...+..|+..|..+|+.|...|.
T Consensus 310 ~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp BBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 4456789999995 432 35788999999999999998774
No 174
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=53.17 E-value=6.6 Score=35.85 Aligned_cols=33 Identities=18% Similarity=0.076 Sum_probs=26.3
Q ss_pred cCCCeEEeeC---C---CCCCChhHHHHHHHHHHHHHHh
Q 020469 289 VKRRLAICGD---F---CVSPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 289 ~~~~l~~aGD---~---~~g~~vegA~~SG~~aA~~l~~ 321 (326)
..++||+||+ | +.|=.+..||-||..|++.+.+
T Consensus 362 ~~~gly~~GE~ldv~g~~GGynlq~a~~sg~~ag~~~~~ 400 (401)
T 2gqf_A 362 QVSGLYFIGEVLDVTGWLGGYNFQWAWSSAYACALSISR 400 (401)
T ss_dssp SSTTEEECGGGBSCEECTTTHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEeEEeccCCCCHHHHHHHHHHHHHHHHHhc
Confidence 5789999995 3 4444799999999999998743
No 175
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=52.88 E-value=14 Score=32.24 Aligned_cols=37 Identities=22% Similarity=0.105 Sum_probs=30.4
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||++||-... .....|+.+|..+|..|...|.
T Consensus 278 t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 278 TSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp CSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhh
Confidence 456789999998764 4688999999999999987663
No 176
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=52.51 E-value=17 Score=33.92 Aligned_cols=46 Identities=13% Similarity=0.155 Sum_probs=31.2
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+..++..+++|+++++|.+|.. +++...+.. +|+.+ .+|.||+|+
T Consensus 242 l~~~l~~~GV~i~~~~~v~~i~~--~~~v~~v~~-~g~~i-~~D~Vi~a~ 287 (490)
T 2bc0_A 242 MAKNMEEHGIQLAFGETVKEVAG--NGKVEKIIT-DKNEY-DVDMVILAV 287 (490)
T ss_dssp HHHHHHTTTCEEEETCCEEEEEC--SSSCCEEEE-SSCEE-ECSEEEECC
T ss_pred HHHHHHhCCeEEEeCCEEEEEEc--CCcEEEEEE-CCcEE-ECCEEEECC
Confidence 33344456889999999999985 332223444 56554 799999994
No 177
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=52.37 E-value=10 Score=34.55 Aligned_cols=38 Identities=18% Similarity=0.246 Sum_probs=30.0
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++++++|..|.. . .+.|.+.+|+.+ .||+||+|+
T Consensus 70 ~~i~~~~~~~v~~id~--~--~~~v~~~~g~~~-~~d~lvlAt 107 (410)
T 3ef6_A 70 ARIDMLTGPEVTALDV--Q--TRTISLDDGTTL-SADAIVIAT 107 (410)
T ss_dssp TTCEEEESCCEEEEET--T--TTEEEETTSCEE-ECSEEEECC
T ss_pred CCCEEEeCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEEcc
Confidence 4678999999999986 3 346777777654 799999995
No 178
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=52.27 E-value=11 Score=36.02 Aligned_cols=49 Identities=18% Similarity=0.102 Sum_probs=33.8
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEeccCCCCCc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASDKNVVSP 137 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~~~~pap 137 (326)
...+..+++|+++++|.+|+. +++ .+...+|+.+ .+|.||+|+-..|..
T Consensus 236 ~~l~~~GV~i~~~~~v~~i~~--~~~--~v~~~~g~~i-~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 236 EHMKNHDVELVFEDGVDALEE--NGA--VVRLKSGSVI-QTDMLILAIGVQPES 284 (588)
T ss_dssp HHHHHTTCEEECSCCEEEEEG--GGT--EEEETTSCEE-ECSEEEECSCEEECC
T ss_pred HHHHHcCCEEEECCeEEEEec--CCC--EEEECCCCEE-EcCEEEEccCCCCCh
Confidence 333446788999999999985 334 3555677654 799999995433333
No 179
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=51.92 E-value=7.6 Score=34.85 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=27.3
Q ss_pred ccCCCeEEeeCCCC--C---CChhHHHHHHHHHHHHHHh
Q 020469 288 DVKRRLAICGDFCV--S---PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 288 ~~~~~l~~aGD~~~--g---~~vegA~~SG~~aA~~l~~ 321 (326)
...++||.+||-.. + +....|...|..+|+.|..
T Consensus 258 t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 296 (367)
T 1xhc_A 258 TSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKG 296 (367)
T ss_dssp CSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcC
Confidence 35678999999752 2 4678999999999999865
No 180
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=51.63 E-value=15 Score=31.98 Aligned_cols=40 Identities=15% Similarity=0.140 Sum_probs=30.4
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEE-EccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSV-SGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l-~~~~g~~~~~~d~VVla~ 131 (326)
+..++++++++ |.+|.. ++.|.| .+.+|+.+ .||.||+|+
T Consensus 82 ~~~~v~~~~~~-v~~i~~---~~~~~v~~~~~g~~~-~~d~lviAt 122 (335)
T 2a87_A 82 LRFGADLRMED-VESVSL---HGPLKSVVTADGQTH-RARAVILAM 122 (335)
T ss_dssp HHTTCEEECCC-EEEEEC---SSSSEEEEETTSCEE-EEEEEEECC
T ss_pred HHcCCEEEEee-EEEEEe---CCcEEEEEeCCCCEE-EeCEEEECC
Confidence 34577888887 888875 456888 77777654 799999995
No 181
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=51.58 E-value=9.1 Score=34.66 Aligned_cols=32 Identities=28% Similarity=0.477 Sum_probs=27.2
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~ 321 (326)
.+++.++||. +.|.++.-|+++|..+|+.|..
T Consensus 302 ~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 302 RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 3689999996 4577999999999999998864
No 182
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=51.45 E-value=13 Score=35.46 Aligned_cols=41 Identities=20% Similarity=0.069 Sum_probs=32.7
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..++++++++.|.++.. .+++..+...+++.. .+|.|++|+
T Consensus 275 ~~gi~~~~~~~v~~~~~--~~~~~~v~~~~~~~~-~~D~vLvAv 315 (542)
T 4b1b_A 275 EQGVMFKNGILPKKLTK--MDDKILVEFSDKTSE-LYDTVLYAI 315 (542)
T ss_dssp HTTCEEEETCCEEEEEE--ETTEEEEEETTSCEE-EESEEEECS
T ss_pred hhcceeecceEEEEEEe--cCCeEEEEEcCCCeE-EEEEEEEcc
Confidence 35678999999999987 567777877777654 799999994
No 183
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=51.43 E-value=7.6 Score=33.51 Aligned_cols=39 Identities=15% Similarity=0.185 Sum_probs=30.4
Q ss_pred eeccCCCeEEeeCCCCC-C-ChhHHHHHHHHHHHHHHhhhc
Q 020469 286 LWDVKRRLAICGDFCVS-P-NVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 286 ~~~~~~~l~~aGD~~~g-~-~vegA~~SG~~aA~~l~~~l~ 324 (326)
+....++||.|||-... . .+--|+.+|..||..|.+.|.
T Consensus 260 ~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 260 GRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp CBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 34556889999997643 2 377899999999999988774
No 184
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=49.36 E-value=9.3 Score=35.43 Aligned_cols=50 Identities=26% Similarity=0.228 Sum_probs=34.9
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCC-CCeEEEcc--CCC--ccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDK-NLWSVSGL--DGQ--SLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~-~~w~l~~~--~g~--~~~~~d~VVla~ 131 (326)
..+.+.+.+.+.++++++++|.+|.. ++ ++..+... +|+ .+ .+|.||+|+
T Consensus 214 ~~~~~~l~~~l~v~i~~~~~v~~i~~--~~~~~v~v~~~~~~G~~~~i-~~D~vi~a~ 268 (466)
T 3l8k_A 214 QDIVNTLLSILKLNIKFNSPVTEVKK--IKDDEYEVIYSTKDGSKKSI-FTNSVVLAA 268 (466)
T ss_dssp HHHHHHHHHHHCCCEECSCCEEEEEE--EETTEEEEEECCTTSCCEEE-EESCEEECC
T ss_pred HHHHHHHHhcCEEEEEECCEEEEEEE--cCCCcEEEEEEecCCceEEE-EcCEEEECc
Confidence 34555555544477999999999986 44 56667665 564 33 799999994
No 185
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=49.15 E-value=20 Score=31.00 Aligned_cols=43 Identities=12% Similarity=0.016 Sum_probs=28.6
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEcc---CCC-ccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGL---DGQ-SLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~---~g~-~~~~~d~VVla~ 131 (326)
+..+++++++++|.+|.. +++...+... +|+ ....+|.||+++
T Consensus 202 ~~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVLILA 248 (335)
T ss_dssp HTTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred ccCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEEEee
Confidence 335788999999999986 4332234333 552 123799999993
No 186
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=48.44 E-value=13 Score=34.19 Aligned_cols=39 Identities=21% Similarity=0.285 Sum_probs=29.8
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+++++++++|..|.. ++ ..|...+|+.+ .||.||+|+
T Consensus 72 ~~gv~~~~~~~v~~i~~--~~--~~v~~~~g~~~-~~d~lviAt 110 (431)
T 1q1r_A 72 AQNIQLLGGTQVTAINR--DR--QQVILSDGRAL-DYDRLVLAT 110 (431)
T ss_dssp HTTEEEECSCCEEEEET--TT--TEEEETTSCEE-ECSEEEECC
T ss_pred hCCCEEEeCCEEEEEEC--CC--CEEEECCCCEE-ECCEEEEcC
Confidence 35778999999999986 33 36666677654 799999995
No 187
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=48.39 E-value=24 Score=32.63 Aligned_cols=43 Identities=12% Similarity=-0.156 Sum_probs=30.2
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCC--eEEEccC---C----CccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNL--WSVSGLD---G----QSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~--w~l~~~~---g----~~~~~~d~VVla~ 131 (326)
.+..+++++++++|.+|+. ++++ ..+...+ | .. ..+|.||+|+
T Consensus 238 l~~~gv~i~~~~~v~~i~~--~~~~~~~~v~~~~~~~g~~~g~~-~~~D~vi~a~ 289 (478)
T 3dk9_A 238 LENAGVEVLKFSQVKEVKK--TLSGLEVSMVTAVPGRLPVMTMI-PDVDCLLWAI 289 (478)
T ss_dssp HHHTTCEEETTEEEEEEEE--CSSSEEEEEEECCTTSCCEEEEE-EEESEEEECS
T ss_pred HHHCCCEEEeCCEEEEEEE--cCCCcEEEEEEccCCCCcccceE-EEcCEEEEee
Confidence 3445788999999999986 4444 5565544 2 23 3799999994
No 188
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=48.17 E-value=18 Score=33.89 Aligned_cols=54 Identities=19% Similarity=0.249 Sum_probs=33.7
Q ss_pred HHHHHHhc---CCCCeeEcceeEeeEEeecC-CCCe-EEEcc-CCCc-ccccc-EEEeccCCCC
Q 020469 80 SICKALCH---QPGVESKFGVGVGRFEWLED-KNLW-SVSGL-DGQS-LGQFN-GVVASDKNVV 135 (326)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~-~~~w-~l~~~-~g~~-~~~~d-~VVla~~~~p 135 (326)
.+.+.|.+ ..+++|+++++|++|.. + ++++ -|... +|+. ...+| .||+|+-+..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~--~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVT--DDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEE--CTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEE--CCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 55555543 34789999999999987 4 3432 23222 3321 23786 9999976654
No 189
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=48.13 E-value=41 Score=32.09 Aligned_cols=40 Identities=20% Similarity=0.241 Sum_probs=32.3
Q ss_pred CCCeeEcceeEeeEEeecCCCC-eEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNL-WSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++|+++++|++|.. ++++ +.|.+.+|+.+ .+|.||+|+
T Consensus 233 ~Gv~I~~~t~V~~I~~--~~~~v~gV~l~~G~~i-~Ad~VVlA~ 273 (549)
T 3nlc_A 233 LGGEIRFSTRVDDLHM--EDGQITGVTLSNGEEI-KSRHVVLAV 273 (549)
T ss_dssp TTCEEESSCCEEEEEE--SSSBEEEEEETTSCEE-ECSCEEECC
T ss_pred cCCEEEeCCEEEEEEE--eCCEEEEEEECCCCEE-ECCEEEECC
Confidence 5789999999999987 4444 55888888754 799999995
No 190
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=47.87 E-value=18 Score=34.54 Aligned_cols=48 Identities=4% Similarity=0.120 Sum_probs=33.9
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEc-cCCCc-cccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~~-~~~~d~VVla~ 131 (326)
.+.+++..+++++++++|.+|.+ +++.+.+.. .+|+. ...||+||+|+
T Consensus 99 ~~~~~~~~gi~v~~~~~V~~id~--~~~~v~v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 99 VERMSKRFNLDIRVLSEVVKINK--EEKTITIKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp HHHHHHHTTCEEECSEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHHHhcCcEEEECCEEEEEEC--CCCEEEEeecCCCCEEEEeCCEEEECC
Confidence 34444456778999999999987 667777764 34541 23799999995
No 191
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=47.17 E-value=12 Score=35.56 Aligned_cols=46 Identities=20% Similarity=0.225 Sum_probs=31.8
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeEEEc-cCCC-ccccccEEEecc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ-SLGQFNGVVASD 131 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~-~~~~~d~VVla~ 131 (326)
.+++..+++++++++|.+|.. +++.+.+.. .+|+ ....||+||+|+
T Consensus 66 ~~~~~~~i~~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~~~d~lviAt 113 (565)
T 3ntd_A 66 SFKARFNVEVRVKHEVVAIDR--AAKLVTVRRLLDGSEYQESYDTLLLSP 113 (565)
T ss_dssp HHHHHHCCEEETTEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred HHHHhcCcEEEECCEEEEEEC--CCCEEEEEecCCCCeEEEECCEEEECC
Confidence 333334677899999999987 667777764 2343 123799999995
No 192
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=46.99 E-value=19 Score=33.45 Aligned_cols=42 Identities=17% Similarity=0.132 Sum_probs=29.6
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
++..+++|+++++|.+|.. +++.+.+.++++ .+ .+|.||+|+
T Consensus 237 l~~~Gv~i~~~~~v~~i~~--~~~v~~v~~~~~-~i-~~D~vi~a~ 278 (480)
T 3cgb_A 237 ADKHHIEILTNENVKAFKG--NERVEAVETDKG-TY-KADLVLVSV 278 (480)
T ss_dssp HHHTTCEEECSCCEEEEEE--SSBEEEEEETTE-EE-ECSEEEECS
T ss_pred HHHcCcEEEcCCEEEEEEc--CCcEEEEEECCC-EE-EcCEEEECc
Confidence 3446788999999999986 433344555443 43 799999994
No 193
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=46.92 E-value=18 Score=31.22 Aligned_cols=40 Identities=8% Similarity=0.032 Sum_probs=29.5
Q ss_pred cCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 87 HQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 87 ~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+..++++++ .+|.+|.. +++.|.|.+ ++..+ .+|.||+|+
T Consensus 83 ~~~~v~~~~-~~v~~i~~--~~~~~~v~~-~~~~~-~~~~li~At 122 (319)
T 3cty_A 83 ANYAKIREG-VEVRSIKK--TQGGFDIET-NDDTY-HAKYVIITT 122 (319)
T ss_dssp HTTSEEEET-CCEEEEEE--ETTEEEEEE-SSSEE-EEEEEEECC
T ss_pred HHcCCEEEE-eeEEEEEE--eCCEEEEEE-CCCEE-EeCEEEECC
Confidence 345677777 78999987 556788876 44444 799999995
No 194
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=46.79 E-value=12 Score=33.86 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=30.2
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+++++++++|.+|.. . .+.+...+|+.+ .||+||+|+
T Consensus 77 ~~~i~~~~~~~v~~id~--~--~~~v~~~~g~~~-~~d~lvlAt 115 (415)
T 3lxd_A 77 DKAVEMKLGAEVVSLDP--A--AHTVKLGDGSAI-EYGKLIWAT 115 (415)
T ss_dssp HTTEEEEETCCEEEEET--T--TTEEEETTSCEE-EEEEEEECC
T ss_pred HCCcEEEeCCEEEEEEC--C--CCEEEECCCCEE-EeeEEEEcc
Confidence 35678999999999976 3 356777777654 799999995
No 195
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=46.16 E-value=19 Score=33.36 Aligned_cols=47 Identities=11% Similarity=0.137 Sum_probs=28.9
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEc-cCCC--ccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQ--SLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~--~~~~~d~VVla~ 131 (326)
.+.+.+..+++++++++|.+|.. +++.+.+.. .+|+ .+ .||.||+|+
T Consensus 72 ~~~~~~~~gi~~~~~~~V~~id~--~~~~v~~~~~~~g~~~~~-~~d~lviAt 121 (472)
T 3iwa_A 72 PEFFRINKDVEALVETRAHAIDR--AAHTVEIENLRTGERRTL-KYDKLVLAL 121 (472)
T ss_dssp ---------CEEECSEEEEEEET--TTTEEEEEETTTCCEEEE-ECSEEEECC
T ss_pred HHHHhhhcCcEEEECCEEEEEEC--CCCEEEEeecCCCCEEEE-ECCEEEEeC
Confidence 33444445677899999999987 667777764 2343 33 799999994
No 196
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=46.05 E-value=17 Score=34.75 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=28.7
Q ss_pred CCCCeeEcceeEeeEEeecCCCC-eEEEcc---CCCc-cccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQS-LGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~---~g~~-~~~~d~VVla~ 131 (326)
..|++|+.+++|++|.. ++++ |.|... +|+. ...+|.||+|+
T Consensus 200 ~~Ga~i~~~t~V~~l~~--~~~~v~gV~~~d~~tg~~~~i~A~~VV~Aa 246 (571)
T 2rgh_A 200 EDGAYLVSKMKAVGFLY--EGDQIVGVKARDLLTDEVIEIKAKLVINTS 246 (571)
T ss_dssp HTTCEEESSEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEBSCEEECC
T ss_pred HcCCeEEeccEEEEEEE--eCCEEEEEEEEEcCCCCEEEEEcCEEEECC
Confidence 35788999999999987 4443 556532 3331 13789999993
No 197
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=45.78 E-value=11 Score=35.14 Aligned_cols=41 Identities=7% Similarity=0.128 Sum_probs=29.9
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEE-ccCCCccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVS-GLDGQSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~-~~~g~~~~~~d~VVla~ 131 (326)
..+++++++++|..|.. +++.|.+. ..++..+ .||.||+|+
T Consensus 104 ~~gv~v~~~~~v~~i~~--~~~~v~v~~~g~~~~~-~~d~lviAt 145 (490)
T 2bc0_A 104 SLGAKVYMESPVQSIDY--DAKTVTALVDGKNHVE-TYDKLIFAT 145 (490)
T ss_dssp HTTCEEETTCCEEEEET--TTTEEEEEETTEEEEE-ECSEEEECC
T ss_pred hCCCEEEeCCEEEEEEC--CCCEEEEEeCCcEEEE-ECCEEEECC
Confidence 35678899999999986 56667775 3223333 799999995
No 198
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=45.76 E-value=14 Score=35.28 Aligned_cols=41 Identities=20% Similarity=0.100 Sum_probs=28.6
Q ss_pred CCCeeEcceeEeeEEeecCCCC-eEEEccC---CC-ccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNL-WSVSGLD---GQ-SLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~-w~l~~~~---g~-~~~~~d~VVla~ 131 (326)
.|++|+++++|.+|.. ++++ |.|...+ |+ ....+|.||+|+
T Consensus 183 ~G~~i~~~~~V~~l~~--~~g~v~gV~~~d~~tg~~~~i~A~~VV~Aa 228 (561)
T 3da1_A 183 RGAVALNYMKVESFIY--DQGKVVGVVAKDRLTDTTHTIYAKKVVNAA 228 (561)
T ss_dssp TTCEEEESEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEECC
T ss_pred cCCEEEcCCEEEEEEE--cCCeEEEEEEEEcCCCceEEEECCEEEECC
Confidence 5789999999999987 4444 4565432 32 113789999993
No 199
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=45.59 E-value=11 Score=35.42 Aligned_cols=38 Identities=18% Similarity=0.168 Sum_probs=29.7
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+++++++++|.+|.. + .+.|.+.+|+.+ .||+||+|+
T Consensus 103 ~gv~~~~g~~v~~id~--~--~~~V~~~~g~~i-~yd~lviAT 140 (493)
T 1m6i_A 103 GGVAVLTGKKVVQLDV--R--DNMVKLNDGSQI-TYEKCLIAT 140 (493)
T ss_dssp CEEEEEETCCEEEEEG--G--GTEEEETTSCEE-EEEEEEECC
T ss_pred CCeEEEcCCEEEEEEC--C--CCEEEECCCCEE-ECCEEEECC
Confidence 4677899999999986 3 346777778654 799999995
No 200
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=45.27 E-value=23 Score=34.49 Aligned_cols=32 Identities=25% Similarity=0.194 Sum_probs=26.0
Q ss_pred CCCeEEeeCCCCCCChhHHHHHHHHHHHHHHh
Q 020469 290 KRRLAICGDFCVSPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 290 ~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~ 321 (326)
.++||+||.-....+-|.|+.+|..|+-....
T Consensus 389 ~~gLf~AGqinGt~GyeEAaaqGl~AG~nAa~ 420 (637)
T 2zxi_A 389 IRGLFHAGNFNGTTGYEEAAGQGIVAGINAAL 420 (637)
T ss_dssp SBTEEECGGGGTBCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeecCCcchHHHHHHHHHHHHHHHHH
Confidence 57999999998877888888889888765543
No 201
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=45.15 E-value=12 Score=32.01 Aligned_cols=24 Identities=21% Similarity=0.144 Sum_probs=13.5
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEe
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEW 104 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~ 104 (326)
|.+.+.+..+++++++++|.+|..
T Consensus 125 l~~~~~~~~gv~i~~~~~V~~i~~ 148 (284)
T 1rp0_A 125 IMSKLLARPNVKLFNAVAAEDLIV 148 (284)
T ss_dssp HHHHHHTSTTEEEEETEEEEEEEE
T ss_pred HHHHHHhcCCCEEEcCcEEEEEEe
Confidence 334443334556667777776664
No 202
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=45.14 E-value=16 Score=33.51 Aligned_cols=37 Identities=5% Similarity=-0.078 Sum_probs=28.2
Q ss_pred ccCCCeEEeeCCCCC-------------CChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVS-------------PNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g-------------~~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||.+||-..- ..-.-|...|..+|+.|+..+.
T Consensus 284 t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~ 333 (430)
T 3hyw_A 284 PTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp SSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 446789999997532 1335799999999999987763
No 203
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=44.62 E-value=9.5 Score=35.12 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=31.3
Q ss_pred HhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 85 LCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 85 La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+++..+++++++++|.+|.. +.+.+...+|.....||+||+|+
T Consensus 68 ~~~~~gi~v~~~~~v~~i~~----~~~~v~~~~g~~~~~~d~lviAt 110 (449)
T 3kd9_A 68 FIKKRGIDLHLNAEVIEVDT----GYVRVRENGGEKSYEWDYLVFAN 110 (449)
T ss_dssp HHHHTTCEEETTCEEEEECS----SEEEEECSSSEEEEECSEEEECC
T ss_pred HHHhcCcEEEecCEEEEEec----CCCEEEECCceEEEEcCEEEECC
Confidence 33345678999999999964 45788776663223799999995
No 204
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=44.34 E-value=8.8 Score=35.25 Aligned_cols=30 Identities=27% Similarity=0.233 Sum_probs=23.5
Q ss_pred cCCCeEEee---CC--CCCC-ChhHHHHHHHHHHHH
Q 020469 289 VKRRLAICG---DF--CVSP-NVEGAILSGLDAASK 318 (326)
Q Consensus 289 ~~~~l~~aG---D~--~~g~-~vegA~~SG~~aA~~ 318 (326)
.-++||||| || ..|| .+.-||-||..|++.
T Consensus 381 ~~~gLy~aGE~lD~~~~~GGynlq~a~stG~~ag~~ 416 (417)
T 3v76_A 381 EVPGLYFVGECVDVTGWLGGYNFQWAWASGFVAGQD 416 (417)
T ss_dssp TSTTEEECGGGBSEEECSSSHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeEecccCCCCHHHHHHHHHHHHHhCc
Confidence 457999999 33 3444 799999999988865
No 205
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=44.27 E-value=33 Score=30.08 Aligned_cols=41 Identities=10% Similarity=0.020 Sum_probs=27.7
Q ss_pred CCCeeEcceeEeeEEeecCCC---CeEEEccCCC-ccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKN---LWSVSGLDGQ-SLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~---~w~l~~~~g~-~~~~~d~VVla~ 131 (326)
.+++++++++|.+|.. +++ ++.+...+|+ ....+|.||+++
T Consensus 215 ~gv~i~~~~~v~~i~~--~~~~v~~v~~~~~~g~~~~i~~D~vi~a~ 259 (360)
T 3ab1_A 215 GTIDVYLETEVASIEE--SNGVLTRVHLRSSDGSKWTVEADRLLILI 259 (360)
T ss_dssp TSEEEESSEEEEEEEE--ETTEEEEEEEEETTCCEEEEECSEEEECC
T ss_pred CceEEEcCcCHHHhcc--CCCceEEEEEEecCCCeEEEeCCEEEECC
Confidence 3578999999999986 333 2344323662 223799999993
No 206
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=44.15 E-value=23 Score=33.43 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=30.4
Q ss_pred cCCCeEEeeCCCCCC--ChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDFCVSP--NVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~~~g~--~vegA~~SG~~aA~~l~~~l~ 324 (326)
..++||.|||-...+ .+..|+.+|..+|..|...|.
T Consensus 479 s~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~ 516 (521)
T 1hyu_A 479 SVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLI 516 (521)
T ss_dssp SSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHH
Confidence 457999999987654 689999999999999988764
No 207
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=42.38 E-value=23 Score=32.30 Aligned_cols=46 Identities=11% Similarity=0.039 Sum_probs=30.8
Q ss_pred HHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccC--CCccccccEEEec
Q 020469 80 SICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD--GQSLGQFNGVVAS 130 (326)
Q Consensus 80 ~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~--g~~~~~~d~VVla 130 (326)
...+...+..+++++++++|.+|+. ++..+...+ |+.+ .+|.||++
T Consensus 204 ~~l~~~l~~~GV~i~~~~~v~~v~~----~~v~~~~~~~~g~~i-~~D~vv~a 251 (430)
T 3h28_A 204 RLVEDLFAERNIDWIANVAVKAIEP----DKVIYEDLNGNTHEV-PAKFTMFM 251 (430)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEECS----SEEEEECTTSCEEEE-ECSEEEEE
T ss_pred HHHHHHHHHCCCEEEeCCEEEEEeC----CeEEEEecCCCceEE-eeeEEEEC
Confidence 3444444556889999999999964 344554322 4443 79999998
No 208
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=40.17 E-value=36 Score=32.62 Aligned_cols=34 Identities=21% Similarity=-0.007 Sum_probs=29.1
Q ss_pred CCCeEEeeCCC------CCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDFC------VSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~~------~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+++.++||.. .|.++.-|+.||..+|+.|...+
T Consensus 346 ~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~ 385 (584)
T 2gmh_A 346 FPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQL 385 (584)
T ss_dssp ETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHH
Confidence 36899999974 46799999999999999998765
No 209
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=40.00 E-value=29 Score=32.23 Aligned_cols=45 Identities=20% Similarity=0.142 Sum_probs=30.0
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccC---CCcc-ccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLD---GQSL-GQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~---g~~~-~~~d~VVla~ 131 (326)
.+..+++++++++|.+|.. .+++...+...+ |+.. ..+|.||+++
T Consensus 235 l~~~gv~~~~~~~v~~i~~-~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~ 283 (488)
T 3dgz_A 235 MESHGTQFLKGCVPSHIKK-LPTNQLQVTWEDHASGKEDTGTFDTVLWAI 283 (488)
T ss_dssp HHHTTCEEEETEEEEEEEE-CTTSCEEEEEEETTTTEEEEEEESEEEECS
T ss_pred HHHCCCEEEeCCEEEEEEE-cCCCcEEEEEEeCCCCeeEEEECCEEEEcc
Confidence 3445788999999999986 233445565433 4321 2689999994
No 210
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=39.29 E-value=23 Score=32.65 Aligned_cols=39 Identities=18% Similarity=0.235 Sum_probs=28.2
Q ss_pred CCCCeeEcceeEeeEEeecCCCCeEEEccCC--CccccccEEEecc
Q 020469 88 QPGVESKFGVGVGRFEWLEDKNLWSVSGLDG--QSLGQFNGVVASD 131 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g--~~~~~~d~VVla~ 131 (326)
..+++++++++|.+|+. +++.+...+| ..+ .+|.||+|+
T Consensus 224 ~~gv~i~~~~~v~~i~~----~~v~v~~~~G~~~~i-~~D~vv~a~ 264 (458)
T 1lvl_A 224 KLGIALHLGHSVEGYEN----GCLLANDGKGGQLRL-EADRVLVAV 264 (458)
T ss_dssp HHTCEEETTCEEEEEET----TEEEEECSSSCCCEE-CCSCEEECC
T ss_pred HCCCEEEECCEEEEEEe----CCEEEEECCCceEEE-ECCEEEECc
Confidence 34788999999999973 2366664445 333 799999994
No 211
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=39.27 E-value=12 Score=34.36 Aligned_cols=48 Identities=13% Similarity=0.035 Sum_probs=33.3
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCC-ccccccEEEec
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQ-SLGQFNGVVAS 130 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~-~~~~~d~VVla 130 (326)
..+.+.+.+..+++++++++|++|+. ++..+...+|. ....+|.||++
T Consensus 203 ~~~l~~~l~~~GV~~~~~~~v~~v~~----~~~~~~~~~g~~~~i~~d~vi~~ 251 (430)
T 3hyw_A 203 KRLVEDLFAERNIDWIANVAVKAIEP----DKVIYEDLNGNTHEVPAKFTMFM 251 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS----SEEEEECTTSCEEEEECSEEEEE
T ss_pred HHHHHHHHHhCCeEEEeCceEEEEeC----CceEEEeeCCCceEeecceEEEe
Confidence 34455555667899999999999964 45556555543 12379999998
No 212
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=37.56 E-value=31 Score=33.69 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=27.4
Q ss_pred cCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhh
Q 020469 289 VKRRLAICGDFCVSPNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 289 ~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~ 322 (326)
..++||+||.-....+-|.|+.+|..|+-.....
T Consensus 383 ~~~gLf~AGqinGttGYeEAaaqGl~AG~nAa~~ 416 (651)
T 3ces_A 383 FIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARL 416 (651)
T ss_dssp SSBTEEECSGGGTCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecCCcChHHHHHHHHHHHHHHHHH
Confidence 3579999999887778889999999888665443
No 213
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=37.28 E-value=30 Score=31.75 Aligned_cols=40 Identities=13% Similarity=-0.025 Sum_probs=28.8
Q ss_pred CCCeeEcceeEeeEEeecCCCCeE-E--Ecc-CCC--ccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWS-V--SGL-DGQ--SLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~-l--~~~-~g~--~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.. +++++. | ... +|+ .+ .+|.||.|+
T Consensus 113 ~gv~i~~~~~v~~i~~--~~~~v~gv~~~~~~~G~~~~~-~ad~VV~Ad 158 (453)
T 3atr_A 113 RGVEIWDLTTAMKPIF--EDGYVKGAVLFNRRTNEELTV-YSKVVVEAT 158 (453)
T ss_dssp TTCEEESSEEEEEEEE--ETTEEEEEEEEETTTTEEEEE-ECSEEEECC
T ss_pred cCCEEEeCcEEEEEEE--ECCEEEEEEEEEcCCCceEEE-EcCEEEECc
Confidence 5788999999999987 445543 3 332 564 33 799999995
No 214
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=36.60 E-value=51 Score=28.07 Aligned_cols=37 Identities=11% Similarity=0.083 Sum_probs=26.4
Q ss_pred eEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 93 SKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 93 i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
..+...|..+.. .+.+.+.+.+.+|+.+ .||+||+|+
T Consensus 77 ~~~~~~~~~~~~-~~~~~~~v~~~~g~~~-~a~~liiAT 113 (304)
T 4fk1_A 77 HYYEKTVVMITK-QSTGLFEIVTKDHTKY-LAERVLLAT 113 (304)
T ss_dssp EEEECCEEEEEE-CTTSCEEEEETTCCEE-EEEEEEECC
T ss_pred EEEeeEEEEeee-cCCCcEEEEECCCCEE-EeCEEEEcc
Confidence 345556666654 2456688888888776 799999995
No 215
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=36.22 E-value=34 Score=31.23 Aligned_cols=41 Identities=12% Similarity=0.243 Sum_probs=29.7
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEc-cCCCc-cccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQS-LGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~~-~~~~d~VVla~ 131 (326)
.++++++++.|.+|.. +++.+.+.. .+|+. ...||+||+|+
T Consensus 69 ~gv~~~~~~~v~~i~~--~~~~v~~~~~~~g~~~~~~~d~lviAt 111 (447)
T 1nhp_A 69 RGVNVFSNTEITAIQP--KEHQVTVKDLVSGEERVENYDKLIISP 111 (447)
T ss_dssp TTCEEEETEEEEEEET--TTTEEEEEETTTCCEEEEECSEEEECC
T ss_pred CCCEEEECCEEEEEeC--CCCEEEEEecCCCceEEEeCCEEEEcC
Confidence 4678889999999986 556666654 34542 13799999995
No 216
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=35.61 E-value=30 Score=33.69 Aligned_cols=34 Identities=21% Similarity=0.149 Sum_probs=28.4
Q ss_pred cCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhh
Q 020469 289 VKRRLAICGDFCVSPNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 289 ~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~ 322 (326)
...+||+||+-....+.+-|+.+|..|+..+...
T Consensus 377 ~~~gLf~AGqi~g~~Gy~eA~a~G~~AG~naa~~ 410 (641)
T 3cp8_A 377 PVENLFFAGQINGTSGYEEAAAQGLMAGINAVRK 410 (641)
T ss_dssp SSBTEEECSGGGTBCCHHHHHHHHHHHHHHHHHH
T ss_pred CcCCEEEEEeecCCccHHHHHHHHHHHHHHHHHH
Confidence 3579999999888788999999999988776544
No 217
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=35.19 E-value=34 Score=32.76 Aligned_cols=40 Identities=18% Similarity=0.215 Sum_probs=28.5
Q ss_pred CCCeeEcceeEeeEEeecCC-CCeE-EEcc------CC---------CccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDK-NLWS-VSGL------DG---------QSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~-~~w~-l~~~------~g---------~~~~~~d~VVla~ 131 (326)
.+++|+++++|.+|.. ++ +.+. |.+. +| ..+ .+|.||+|+
T Consensus 157 ~Gv~i~~g~~v~~l~~--~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i-~Ad~VV~Ad 213 (584)
T 2gmh_A 157 LGVEVYPGYAAAEILF--HEDGSVKGIATNDVGIQKDGAPKTTFERGLEL-HAKVTIFAE 213 (584)
T ss_dssp TTCEEETTCCEEEEEE--CTTSSEEEEEECCEEECTTSCEEEEEECCCEE-ECSEEEECC
T ss_pred cCCEEEcCCEEEEEEE--cCCCCEEEEEeCCccccCCCCcccccCCceEE-ECCEEEEee
Confidence 4789999999999987 44 3333 6544 33 333 799999994
No 218
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=33.82 E-value=39 Score=29.88 Aligned_cols=36 Identities=19% Similarity=0.262 Sum_probs=29.1
Q ss_pred cCCCeEEeeCC--------CCCCChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDF--------CVSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~--------~~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
-.++|++||-. --|+.+-+-++||.++|+.|++.|.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 35689999843 2356789999999999999999875
No 219
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=33.74 E-value=22 Score=33.03 Aligned_cols=48 Identities=10% Similarity=-0.048 Sum_probs=31.0
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCe---EEEccCCCccccccEEEeccC
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLW---SVSGLDGQSLGQFNGVVASDK 132 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w---~l~~~~g~~~~~~d~VVla~~ 132 (326)
..|.+.+ +..+++|+++++| +|.. +++.+ .+.+.+|+ + .+|.||+|+-
T Consensus 123 ~~L~~~~-~~~gv~i~~~~~v-~l~~--~~~~v~Gv~v~~~~g~-~-~a~~VVlAtG 173 (472)
T 2e5v_A 123 NFLLKLA-REEGIPIIEDRLV-EIRV--KDGKVTGFVTEKRGLV-E-DVDKLVLATG 173 (472)
T ss_dssp HHHHHHH-HHTTCCEECCCEE-EEEE--ETTEEEEEEETTTEEE-C-CCSEEEECCC
T ss_pred HHHHHHH-HhCCCEEEECcEE-EEEE--eCCEEEEEEEEeCCCe-E-EeeeEEECCC
Confidence 3444444 3457889999999 9976 34433 34334443 3 5999999963
No 220
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=33.30 E-value=43 Score=30.59 Aligned_cols=41 Identities=10% Similarity=-0.019 Sum_probs=28.0
Q ss_pred hcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 86 CHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 86 a~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+.. +++++++.|.+|.. ++ +......+|+.+ .+|.||+|+
T Consensus 200 l~~~-v~i~~~~~v~~i~~--~~-~v~~v~~~g~~i-~~D~Vv~a~ 240 (449)
T 3kd9_A 200 LKKH-VNLRLQEITMKIEG--EE-RVEKVVTDAGEY-KAELVILAT 240 (449)
T ss_dssp HTTT-SEEEESCCEEEEEC--SS-SCCEEEETTEEE-ECSEEEECS
T ss_pred HHhC-cEEEeCCeEEEEec--cC-cEEEEEeCCCEE-ECCEEEEee
Confidence 3334 88999999999985 33 333223455554 799999994
No 221
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=32.71 E-value=26 Score=34.35 Aligned_cols=43 Identities=16% Similarity=-0.000 Sum_probs=29.0
Q ss_pred HHhcCCCCeeEcceeEeeEEeecCCCCeEEEc---cCCCccccccEEEecc
Q 020469 84 ALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG---LDGQSLGQFNGVVASD 131 (326)
Q Consensus 84 ~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~---~~g~~~~~~d~VVla~ 131 (326)
..++..+++|+++++|.+|.. + +..+.. .+++.+ .+|.||+|+
T Consensus 575 ~~l~~~GV~i~~~~~V~~i~~--~--~~~v~~~~~~~~~~i-~aD~VV~A~ 620 (690)
T 3k30_A 575 RRLIENGVARVTDHAVVAVGA--G--GVTVRDTYASIEREL-ECDAVVMVT 620 (690)
T ss_dssp HHHHHTTCEEEESEEEEEEET--T--EEEEEETTTCCEEEE-ECSEEEEES
T ss_pred HHHHHCCCEEEcCcEEEEEEC--C--eEEEEEccCCeEEEE-ECCEEEECC
Confidence 333446889999999999974 3 334432 234343 799999993
No 222
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=32.38 E-value=46 Score=30.39 Aligned_cols=47 Identities=9% Similarity=0.121 Sum_probs=33.2
Q ss_pred chHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 78 MNSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 78 m~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
+....+...+..+++++++++|.+++. + .+...+|+.+ .+|.||++.
T Consensus 190 ~~~~~~~~l~~~gV~i~~~~~v~~~~~----~--~v~~~~g~~~-~~D~vl~a~ 236 (437)
T 4eqs_A 190 MNQPILDELDKREIPYRLNEEINAING----N--EITFKSGKVE-HYDMIIEGV 236 (437)
T ss_dssp GGHHHHHHHHHTTCCEEESCCEEEEET----T--EEEETTSCEE-ECSEEEECC
T ss_pred hHHHHHHHhhccceEEEeccEEEEecC----C--eeeecCCeEE-eeeeEEEEe
Confidence 344444444556788999999999863 2 4556777764 799999994
No 223
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=31.69 E-value=28 Score=31.97 Aligned_cols=35 Identities=23% Similarity=0.333 Sum_probs=27.4
Q ss_pred cCCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 289 VKRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 289 ~~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
+-++||+||.- +.|-.+-.||-||+.|++.+....
T Consensus 403 ~i~GLy~aGEv~~v~g~~GG~~l~~a~~~G~~Ag~~aa~~~ 443 (447)
T 2i0z_A 403 FTNGLYFCGEVLDIHGYTGGYNITSALVTGRIAGTTAGENA 443 (447)
T ss_dssp SSBTEEECGGGBSCBCCTTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeeccCccCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 46799999932 334478999999999999887654
No 224
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=31.46 E-value=54 Score=29.69 Aligned_cols=36 Identities=6% Similarity=-0.074 Sum_probs=29.8
Q ss_pred cCCCeEEeeCCCCC-------------CChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDFCVS-------------PNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~~~g-------------~~vegA~~SG~~aA~~l~~~l~ 324 (326)
..++||.+||-... .....|...|..+|+.|...|.
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~ 333 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIR 333 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence 56899999998653 2578899999999999988764
No 225
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=30.70 E-value=30 Score=31.68 Aligned_cols=40 Identities=8% Similarity=0.127 Sum_probs=29.7
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEc-cCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSG-LDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~-~~g~~~~~~d~VVla~ 131 (326)
.+++++++++|.+|.. +.+.|.+.. .++..+ .||.||+|+
T Consensus 71 ~gi~~~~~~~V~~id~--~~~~v~v~~~~~~~~~-~~d~lviAt 111 (452)
T 3oc4_A 71 QKIQLLLNREVVAMDV--ENQLIAWTRKEEQQWY-SYDKLILAT 111 (452)
T ss_dssp TTEEEECSCEEEEEET--TTTEEEEEETTEEEEE-ECSEEEECC
T ss_pred CCCEEEECCEEEEEEC--CCCEEEEEecCceEEE-EcCEEEECC
Confidence 5677889999999987 667777752 233333 799999995
No 226
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=30.32 E-value=49 Score=32.19 Aligned_cols=47 Identities=21% Similarity=0.198 Sum_probs=32.0
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCC--CccccccEEEecc
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDG--QSLGQFNGVVASD 131 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g--~~~~~~d~VVla~ 131 (326)
..+.+...+..+++++++++|.+|.. ++..+. .+| +. ..+|.||+++
T Consensus 576 ~~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~G~~~~-i~~D~Vi~a~ 624 (671)
T 1ps9_A 576 GWIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-INGETQV-LAVDNVVICA 624 (671)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ETTEEEE-ECCSEEEECC
T ss_pred HHHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cCCeEEE-EeCCEEEECC
Confidence 33444444556889999999999973 345554 456 33 3799999993
No 227
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.92 E-value=28 Score=30.84 Aligned_cols=34 Identities=18% Similarity=0.258 Sum_probs=27.9
Q ss_pred CCCeEEeeCC------CCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDF------CVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.++++++||. +.|-+++-|++++..+|+.|...+
T Consensus 310 ~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~ 349 (412)
T 4hb9_A 310 SSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVA 349 (412)
T ss_dssp CCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 4789999996 346689999999999999887643
No 228
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=29.91 E-value=52 Score=30.58 Aligned_cols=35 Identities=11% Similarity=0.105 Sum_probs=30.4
Q ss_pred cCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhh
Q 020469 289 VKRRLAICGDFCVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 289 ~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
..++||.+||-...+.+..|+..|..+|+.|...+
T Consensus 342 s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 342 IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 44689999998777789999999999999998765
No 229
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=29.77 E-value=21 Score=35.04 Aligned_cols=34 Identities=24% Similarity=0.297 Sum_probs=30.3
Q ss_pred CCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDFCVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.++|+.+||....+.+..|+..|..+|..|...|
T Consensus 641 ~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l 674 (690)
T 3k30_A 641 IASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVL 674 (690)
T ss_dssp CSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhc
Confidence 4689999999988899999999999999987664
No 230
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=29.76 E-value=31 Score=29.31 Aligned_cols=37 Identities=24% Similarity=0.296 Sum_probs=24.6
Q ss_pred CchHHHHHHhcCCCCeeEcceeEeeEEee---cCCCCeEEEccCCC
Q 020469 77 GMNSICKALCHQPGVESKFGVGVGRFEWL---EDKNLWSVSGLDGQ 119 (326)
Q Consensus 77 Gm~~l~~~La~~l~~~i~~~~~V~~i~~~---~~~~~w~l~~~~g~ 119 (326)
||++|+..+.+-.| .+|.+|++. ..+..|+|+++||+
T Consensus 1 g~~~v~a~~~~l~G------~~v~~v~~~g~G~~~~vyrv~l~DG~ 40 (288)
T 3f7w_A 1 GVNSVAARVTELTG------REVAAVAERGHSHRWHLYRVELADGT 40 (288)
T ss_dssp CCHHHHHHHHHHHC------CCEEEEEEEEEETTEEEEEEEETTSC
T ss_pred ChHHHHHHHHHhcC------CCeEEEEecCCCCCeEEEEEEECCCC
Confidence 89999999987444 445555441 12235888888885
No 231
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=29.74 E-value=20 Score=34.72 Aligned_cols=58 Identities=10% Similarity=-0.029 Sum_probs=38.5
Q ss_pred CCeeEcceeEeeEEeecCCC---CeEEEc-cCCCc-cccccEEEeccCCCCCcchhhhcCCCC
Q 020469 90 GVESKFGVGVGRFEWLEDKN---LWSVSG-LDGQS-LGQFNGVVASDKNVVSPRFRDVTGRPP 147 (326)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~~---~w~l~~-~~g~~-~~~~d~VVla~~~~pap~~~~ll~~~~ 147 (326)
+++|++++.|.+|..+.+++ ++.+.. .+|+. ...+|.||++.-.+|.|+++.+.++.+
T Consensus 274 nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~sgiG~ 336 (623)
T 3pl8_A 274 RFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQ 336 (623)
T ss_dssp EEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHTTTSSC
T ss_pred CEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHhcCCCc
Confidence 57899999999998721111 233433 24541 236899999987778888877766544
No 232
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=29.69 E-value=34 Score=31.36 Aligned_cols=40 Identities=10% Similarity=0.194 Sum_probs=29.1
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEcc-C--CCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGL-D--GQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~-~--g~~~~~~d~VVla~ 131 (326)
.+++++++++|..|.. +++.+.+... + +..+ .||.||+|+
T Consensus 71 ~gv~~~~~~~v~~i~~--~~~~v~v~~~~~g~~~~~-~~d~lviAt 113 (452)
T 2cdu_A 71 LGANVQMRHQVTNVDP--ETKTIKVKDLITNEEKTE-AYDKLIMTT 113 (452)
T ss_dssp TTCEEEESEEEEEEEG--GGTEEEEEETTTCCEEEE-ECSEEEECC
T ss_pred cCCEEEeCCEEEEEEc--CCCEEEEEecCCCceEEE-ECCEEEEcc
Confidence 5678899999999986 5566777542 2 2333 799999995
No 233
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=29.67 E-value=54 Score=29.78 Aligned_cols=36 Identities=8% Similarity=-0.201 Sum_probs=29.6
Q ss_pred cCCCeEEeeCCCCC-------------CChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDFCVS-------------PNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~~~g-------------~~vegA~~SG~~aA~~l~~~l~ 324 (326)
..++||.+||-... .....|...|..+|+.|...|.
T Consensus 296 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~ 344 (437)
T 3sx6_A 296 KYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLE 344 (437)
T ss_dssp SCTTEEECGGGBCCCCSCCCSSCCCCCCCHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEEEeccCCcCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999997652 2577899999999999988764
No 234
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=29.09 E-value=45 Score=30.37 Aligned_cols=47 Identities=17% Similarity=0.032 Sum_probs=31.1
Q ss_pred hHHHHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEc--cCC-----CccccccEEEec
Q 020469 79 NSICKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSG--LDG-----QSLGQFNGVVAS 130 (326)
Q Consensus 79 ~~l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~--~~g-----~~~~~~d~VVla 130 (326)
....+...+..+++++++++|.+|+. ++..+.. .+| .. ..+|.||++
T Consensus 211 ~~~~~~~l~~~gI~~~~~~~v~~v~~----~~v~~~~~~~~g~~~~~~~-i~~D~vv~~ 264 (437)
T 3sx6_A 211 KGILTKGLKEEGIEAYTNCKVTKVED----NKMYVTQVDEKGETIKEMV-LPVKFGMMI 264 (437)
T ss_dssp HHHHHHHHHHTTCEEECSEEEEEEET----TEEEEEEECTTSCEEEEEE-EECSEEEEE
T ss_pred HHHHHHHHHHCCCEEEcCCEEEEEEC----CeEEEEecccCCccccceE-EEEeEEEEc
Confidence 44444445556889999999999974 3344433 333 33 379999998
No 235
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=28.66 E-value=40 Score=30.03 Aligned_cols=35 Identities=23% Similarity=0.303 Sum_probs=28.9
Q ss_pred CCCeEEeeCC--------CCCCChhHHHHHHHHHHHHHHhhhc
Q 020469 290 KRRLAICGDF--------CVSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 290 ~~~l~~aGD~--------~~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
.++|++||=. --|+.+-+-++||.++|+.|++.|.
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 4689999932 2367899999999999999998874
No 236
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=28.12 E-value=78 Score=30.27 Aligned_cols=50 Identities=4% Similarity=-0.168 Sum_probs=31.1
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecC-CCC---eEEEc-cCCCc-cccccEEEeccCC
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLED-KNL---WSVSG-LDGQS-LGQFNGVVASDKN 133 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~-~~~---w~l~~-~~g~~-~~~~d~VVla~~~ 133 (326)
|.+.+.+ .+++|+++++|.+|.. + ++. +.+.. .+|+. ...++.||+|+-+
T Consensus 149 L~~~~~~-~gv~i~~~~~v~~L~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg 204 (588)
T 2wdq_A 149 LYQQNLK-NHTTIFSEWYALDLVK--NQDGAVVGCTALCIETGEVVYFKARATVLATGG 204 (588)
T ss_dssp HHHHHHH-TTCEEEETEEEEEEEE--CTTSCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHh-CCCEEEeCcEEEEEEE--CCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCC
Confidence 3344333 4789999999999986 3 333 23322 45642 1268999999543
No 237
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=27.86 E-value=56 Score=29.25 Aligned_cols=35 Identities=23% Similarity=0.104 Sum_probs=29.8
Q ss_pred cCCCeEEeeCCCC---CCChhHHHHHHHHHHHHHHhhh
Q 020469 289 VKRRLAICGDFCV---SPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 289 ~~~~l~~aGD~~~---g~~vegA~~SG~~aA~~l~~~l 323 (326)
..++|+++||-.. ......|...|..+|+.|...+
T Consensus 298 ~~~~vfa~GD~~~~~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp SCTTEEECGGGBTTCCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEeehhccCCCCcHHHHHHHHHHHHHHHHHHHh
Confidence 4679999999864 3467899999999999998877
No 238
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=27.82 E-value=55 Score=29.17 Aligned_cols=36 Identities=19% Similarity=0.286 Sum_probs=29.5
Q ss_pred ccCCCeEEeeCCCCC----CChhHHHHHHHHHHHHHHhhh
Q 020469 288 DVKRRLAICGDFCVS----PNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g----~~vegA~~SG~~aA~~l~~~l 323 (326)
...++||.+||-+.+ .....|...|..+|+.|+..|
T Consensus 284 t~~p~VfAiGDva~~~~~pk~a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 284 SLQPGIHVIGDACNAAPMPKSAYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp SSSTTEEECGGGBCCTTSCBSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 446799999997654 256889999999999998876
No 239
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=27.75 E-value=35 Score=30.65 Aligned_cols=35 Identities=17% Similarity=0.091 Sum_probs=28.8
Q ss_pred eccCCCeEEeeCCCC-----CCChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCV-----SPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~-----g~~vegA~~SG~~aA~~l~~ 321 (326)
....++||.+||-.. .+....|+..|..+|+.|+.
T Consensus 254 ~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g 293 (385)
T 3klj_A 254 ETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACG 293 (385)
T ss_dssp BCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcC
Confidence 345789999999753 45789999999999999875
No 240
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=27.55 E-value=38 Score=30.21 Aligned_cols=34 Identities=24% Similarity=0.191 Sum_probs=28.6
Q ss_pred CCCeEEeeCCC------CCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDFC------VSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~~------~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+++.++||.. .|.++.-|+++|..+|+.|...+
T Consensus 285 ~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~ 324 (399)
T 2x3n_A 285 ADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLAL 324 (399)
T ss_dssp ETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhh
Confidence 37899999973 46789999999999999997654
No 241
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=26.70 E-value=76 Score=30.68 Aligned_cols=52 Identities=10% Similarity=-0.111 Sum_probs=32.4
Q ss_pred HHHHHHhc---CCCCeeEcceeEeeEEeecCCCC---eEEEc-cCCCc-cccccEEEeccCC
Q 020469 80 SICKALCH---QPGVESKFGVGVGRFEWLEDKNL---WSVSG-LDGQS-LGQFNGVVASDKN 133 (326)
Q Consensus 80 ~l~~~La~---~l~~~i~~~~~V~~i~~~~~~~~---w~l~~-~~g~~-~~~~d~VVla~~~ 133 (326)
.+.+.|.+ ..+++|+.+++|.+|.. +++. +.+.. .+|+. ...++.||+|+-+
T Consensus 156 ~l~~~L~~~~~~~gv~i~~~~~v~~Li~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 215 (621)
T 2h88_A 156 SLLHTLYGRSLRYDTSYFVEYFALDLLM--ENGECRGVIALCIEDGTIHRFRAKNTVIATGG 215 (621)
T ss_dssp HHHHHHHHHHTTSCCEEEETEEEEEEEE--ETTEEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEEceEEEEEEE--ECCEEEEEEEEEcCCCcEEEEEcCeEEECCCc
Confidence 44444433 35789999999999986 3342 33332 45641 1368999999643
No 242
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=26.59 E-value=28 Score=32.86 Aligned_cols=63 Identities=16% Similarity=0.067 Sum_probs=39.3
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecCCCC-eEEEcc---CCCc----cccccEEEeccCCCCCcchhhhcCC
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNL-WSVSGL---DGQS----LGQFNGVVASDKNVVSPRFRDVTGR 145 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~-w~l~~~---~g~~----~~~~d~VVla~~~~pap~~~~ll~~ 145 (326)
+.+.+.+..+++|++++.|++|.. ++++ .-|... +|+. +..++.||+|.-.+..|+++.+.++
T Consensus 201 ~l~~~~~~~~~~i~~~~~V~~i~~--~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGi 271 (546)
T 1kdg_A 201 YLQTALARPNFTFKTNVMVSNVVR--NGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI 271 (546)
T ss_dssp HHHHHHTCTTEEEECSCCEEEEEE--ETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTB
T ss_pred HHHHHhhCCCcEEEeCCEEEEEEE--eCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCC
Confidence 555555545788999999999987 3332 223332 3532 1157889999654556776666554
No 243
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=26.38 E-value=32 Score=30.59 Aligned_cols=42 Identities=12% Similarity=0.019 Sum_probs=29.7
Q ss_pred HHHHhcCCCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 82 CKALCHQPGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 82 ~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.+...+..+++++++++|.+|+. + .+.+++|+ + .+|.||+|+
T Consensus 189 l~~~l~~~gV~i~~~~~v~~i~~----~--~v~~~~g~-i-~~D~vi~a~ 230 (367)
T 1xhc_A 189 IKDMLEETGVKFFLNSELLEANE----E--GVLTNSGF-I-EGKVKICAI 230 (367)
T ss_dssp HHHHHHHTTEEEECSCCEEEECS----S--EEEETTEE-E-ECSCEEEEC
T ss_pred HHHHHHHCCCEEEcCCEEEEEEe----e--EEEECCCE-E-EcCEEEECc
Confidence 33334446788999999999962 2 35556776 4 899999993
No 244
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=26.24 E-value=46 Score=29.89 Aligned_cols=37 Identities=8% Similarity=0.131 Sum_probs=27.7
Q ss_pred CCCeeEcceeEeeEEeecCCCCeEEEccCCCccccccEEEecc
Q 020469 89 PGVESKFGVGVGRFEWLEDKNLWSVSGLDGQSLGQFNGVVASD 131 (326)
Q Consensus 89 l~~~i~~~~~V~~i~~~~~~~~w~l~~~~g~~~~~~d~VVla~ 131 (326)
.++++++ ++|.+|.. +.+ .+...+|+.+ .||+||+|+
T Consensus 70 ~~i~~~~-~~v~~id~--~~~--~v~~~~g~~~-~~d~lvlAt 106 (404)
T 3fg2_P 70 QAIELIS-DRMVSIDR--EGR--KLLLASGTAI-EYGHLVLAT 106 (404)
T ss_dssp TTEEEEC-CCEEEEET--TTT--EEEESSSCEE-ECSEEEECC
T ss_pred CCCEEEE-EEEEEEEC--CCC--EEEECCCCEE-ECCEEEEee
Confidence 4667888 99999986 433 5666677654 799999995
No 245
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=26.23 E-value=61 Score=31.14 Aligned_cols=42 Identities=14% Similarity=-0.089 Sum_probs=28.3
Q ss_pred CC-CeeEcceeEeeEEeecCCCC---eEEE-ccCCCc-cccccEEEeccC
Q 020469 89 PG-VESKFGVGVGRFEWLEDKNL---WSVS-GLDGQS-LGQFNGVVASDK 132 (326)
Q Consensus 89 l~-~~i~~~~~V~~i~~~~~~~~---w~l~-~~~g~~-~~~~d~VVla~~ 132 (326)
.+ ++|+++++|.+|.. +++. +.+. ..+|+. ...++.||+|+-
T Consensus 147 ~gnv~i~~~~~v~~l~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtG 194 (602)
T 1kf6_A 147 FPQIQRFDEHFVLDILV--DDGHVRGLVAMNMMEGTLVQIRANAVVMATG 194 (602)
T ss_dssp CTTEEEEETEEEEEEEE--ETTEEEEEEEEETTTTEEEEEECSCEEECCC
T ss_pred CCCcEEEeCCEEEEEEE--eCCEEEEEEEEEcCCCcEEEEEcCeEEECCC
Confidence 45 78999999999986 3342 3333 356641 137899999963
No 246
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=26.02 E-value=57 Score=33.42 Aligned_cols=36 Identities=8% Similarity=0.117 Sum_probs=31.1
Q ss_pred cCCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhhc
Q 020469 289 VKRRLAICGDFCVSPNVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 289 ~~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l~ 324 (326)
..++||.+||-.....+..|+..|..+|..|...++
T Consensus 409 s~p~IyAaGD~a~~~~l~~A~~~G~~aA~~i~~~lg 444 (965)
T 2gag_A 409 AVANQHLAGAMTGRLDTASALSTGAATGAAAATAAG 444 (965)
T ss_dssp CCTTEEECGGGGTCCSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEecCCchhHHHHHHHHHHHHHHHHHHcC
Confidence 457899999987777788999999999999988764
No 247
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=25.41 E-value=43 Score=29.88 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=26.4
Q ss_pred CeEEeeCC------CCCCChhHHHHHHHHHHHHHHh
Q 020469 292 RLAICGDF------CVSPNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 292 ~l~~aGD~------~~g~~vegA~~SG~~aA~~l~~ 321 (326)
++.++||. +.|.++.-|+++|..+|+.|..
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 350 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLAD 350 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHS
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHh
Confidence 89999997 3577999999999999999864
No 248
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=25.37 E-value=57 Score=30.30 Aligned_cols=35 Identities=14% Similarity=0.042 Sum_probs=28.5
Q ss_pred eccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~ 321 (326)
....++||.+||-..++ ....|...|+.+|+.|..
T Consensus 302 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 337 (492)
T 3ic9_A 302 QTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAGA 337 (492)
T ss_dssp BCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHcC
Confidence 34567999999987654 456899999999999976
No 249
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=25.06 E-value=45 Score=29.90 Aligned_cols=48 Identities=23% Similarity=0.297 Sum_probs=32.0
Q ss_pred HHHHHhcCCC-CeeEcceeEeeEEeecCCCCeEEEccC---CC-ccccccEEEecc
Q 020469 81 ICKALCHQPG-VESKFGVGVGRFEWLEDKNLWSVSGLD---GQ-SLGQFNGVVASD 131 (326)
Q Consensus 81 l~~~La~~l~-~~i~~~~~V~~i~~~~~~~~w~l~~~~---g~-~~~~~d~VVla~ 131 (326)
|.+.+.+..+ ++|+++++|.+|.. +++|.+.+.+ |+ ....+|.||.|+
T Consensus 113 L~~~~~~~~g~~~v~~~~~v~~i~~---~~~v~v~~~~~~~g~~~~~~ad~vV~Ad 165 (410)
T 3c96_A 113 LLAAVRERLGQQAVRTGLGVERIEE---RDGRVLIGARDGHGKPQALGADVLVGAD 165 (410)
T ss_dssp HHHHHHHHHCTTSEEESEEEEEEEE---ETTEEEEEEEETTSCEEEEEESEEEECC
T ss_pred HHHHHHhhCCCcEEEECCEEEEEec---CCccEEEEecCCCCCceEEecCEEEECC
Confidence 3344433224 47999999999985 3568887654 62 123799999994
No 250
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=24.69 E-value=66 Score=29.51 Aligned_cols=35 Identities=17% Similarity=0.115 Sum_probs=28.9
Q ss_pred ccCCCeEEeeCCCCC-CChhHHHHHHHHHHHHHHhh
Q 020469 288 DVKRRLAICGDFCVS-PNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g-~~vegA~~SG~~aA~~l~~~ 322 (326)
...++||.+||-..+ .....|...|+.+|+.|...
T Consensus 298 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 298 TNIPNVFATGDANGLAPYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CSSTTEEECGGGTCSCCSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHhCC
Confidence 456799999998764 46788999999999999753
No 251
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=24.15 E-value=62 Score=29.62 Aligned_cols=35 Identities=17% Similarity=0.010 Sum_probs=28.4
Q ss_pred eccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~ 321 (326)
....++||.+||-..++ ....|+..|..+|+.|..
T Consensus 298 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g 333 (464)
T 2a8x_A 298 RTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETIAG 333 (464)
T ss_dssp BCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHhcC
Confidence 34567999999987654 467899999999999875
No 252
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=23.64 E-value=38 Score=30.13 Aligned_cols=34 Identities=15% Similarity=0.068 Sum_probs=26.5
Q ss_pred ccCCCeEEeeCCCC--C---CChhHHHHHHHHHHHHHHh
Q 020469 288 DVKRRLAICGDFCV--S---PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 288 ~~~~~l~~aGD~~~--g---~~vegA~~SG~~aA~~l~~ 321 (326)
...++||.+||-.. + +.+..|...|+.+|+.|+.
T Consensus 267 t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g 305 (384)
T 2v3a_A 267 TSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAG 305 (384)
T ss_dssp CSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcC
Confidence 44678999999753 3 2477789999999999864
No 253
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=23.50 E-value=77 Score=28.98 Aligned_cols=35 Identities=17% Similarity=0.099 Sum_probs=28.1
Q ss_pred eccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~ 321 (326)
....++||.+||-..++ ...-|+..|+.+|+.|..
T Consensus 306 ~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g 341 (470)
T 1dxl_A 306 STNVSGVYAIGDVIPGPMLAHKAEEDGVACVEYLAG 341 (470)
T ss_dssp BCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 34567999999987654 467799999999999865
No 254
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=23.37 E-value=56 Score=31.82 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=31.5
Q ss_pred HHHHHhcCCCCeeEcceeEeeEEeecCCCCeE-EEccCCCccccccEEEeccC
Q 020469 81 ICKALCHQPGVESKFGVGVGRFEWLEDKNLWS-VSGLDGQSLGQFNGVVASDK 132 (326)
Q Consensus 81 l~~~La~~l~~~i~~~~~V~~i~~~~~~~~w~-l~~~~g~~~~~~d~VVla~~ 132 (326)
+.+.+.+..+++| ++..|..|.. +++.+. |.+.+|..+ .+|.||+|+=
T Consensus 123 L~~~l~~~~GV~I-~~~~V~~L~~--d~g~V~GV~t~~G~~i-~Ad~VVLATG 171 (641)
T 3cp8_A 123 MRRIVEHEPNIDL-LQDTVIGVSA--NSGKFSSVTVRSGRAI-QAKAAILACG 171 (641)
T ss_dssp HHHHHHTCTTEEE-EECCEEEEEE--ETTEEEEEEETTSCEE-EEEEEEECCT
T ss_pred HHHHHHhCCCCEE-EeeEEEEEEe--cCCEEEEEEECCCcEE-EeCEEEECcC
Confidence 3334433236677 4568999876 445554 777777655 7999999953
No 255
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=22.81 E-value=46 Score=31.47 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=26.6
Q ss_pred ccCCCeEEeeCCC-C---------CCChhHHHHHHHHHHHHHHhhh
Q 020469 288 DVKRRLAICGDFC-V---------SPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 288 ~~~~~l~~aGD~~-~---------g~~vegA~~SG~~aA~~l~~~l 323 (326)
.+-++||.||+-. . |.++-.|+..|+.|++.+...+
T Consensus 365 t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~ 410 (540)
T 1chu_A 365 TDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRM 410 (540)
T ss_dssp CSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhc
Confidence 4567999999853 1 2357779999999999886543
No 256
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=22.54 E-value=86 Score=28.84 Aligned_cols=35 Identities=20% Similarity=0.109 Sum_probs=28.5
Q ss_pred eccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~ 321 (326)
....++||.|||-..+ .....|+..|+.+|+.|+.
T Consensus 315 ~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~g 351 (483)
T 3dgh_A 315 ATNVANIYAVGDIIYGKPELTPVAVLAGRLLARRLYG 351 (483)
T ss_dssp BCSSTTEEECSTTBTTSCCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEEcccCCCCccHHHHHHHHHHHHHHHcC
Confidence 3456799999998643 4678899999999999875
No 257
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=22.46 E-value=78 Score=29.02 Aligned_cols=35 Identities=14% Similarity=0.087 Sum_probs=28.7
Q ss_pred ccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHhh
Q 020469 288 DVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~~ 322 (326)
...++||.+||-..++ ....|...|+.+|+.|...
T Consensus 308 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 343 (476)
T 3lad_A 308 TSVPGVYAIGDVVRGAMLAHKASEEGVVVAERIAGH 343 (476)
T ss_dssp CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEEccCCCcccHHHHHHHHHHHHHHhcCC
Confidence 4567999999987543 5788999999999999754
No 258
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=22.44 E-value=52 Score=30.74 Aligned_cols=53 Identities=13% Similarity=-0.058 Sum_probs=32.8
Q ss_pred CCeeEcceeEeeEEeecCC-CC--eEEEc--cCC---C-ccccccEEEeccCCCCCcchhhhcC
Q 020469 90 GVESKFGVGVGRFEWLEDK-NL--WSVSG--LDG---Q-SLGQFNGVVASDKNVVSPRFRDVTG 144 (326)
Q Consensus 90 ~~~i~~~~~V~~i~~~~~~-~~--w~l~~--~~g---~-~~~~~d~VVla~~~~pap~~~~ll~ 144 (326)
+++|+++++|++|.. ++ ++ .-|.. .+| + ....++.||||.-.+-.|+++.+-+
T Consensus 236 n~~i~~~~~V~~i~~--~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~~Sg 297 (504)
T 1n4w_A 236 KVTIQTLHQVKTIRQ--TKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLVRAR 297 (504)
T ss_dssp SEEEEESEEEEEEEE--CTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHHHHH
T ss_pred CcEEEeCCEEEEEEE--CCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHHhcc
Confidence 478999999999987 43 22 22322 355 1 1236789999965444566555433
No 259
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=22.33 E-value=65 Score=29.79 Aligned_cols=36 Identities=14% Similarity=-0.003 Sum_probs=29.1
Q ss_pred eccCCCeEEeeCCCCC-CChhHHHHHHHHHHHHHHhh
Q 020469 287 WDVKRRLAICGDFCVS-PNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g-~~vegA~~SG~~aA~~l~~~ 322 (326)
....++||.+||-..+ .....|...|+.+|+.|...
T Consensus 327 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~g~ 363 (491)
T 3urh_A 327 QTSIAGVYAIGDVVRGPMLAHKAEDEGVAVAEIIAGQ 363 (491)
T ss_dssp BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCEEEEEecCCCccchhHHHHHHHHHHHHHcCC
Confidence 3456799999998744 46888999999999998753
No 260
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=22.05 E-value=75 Score=29.20 Aligned_cols=36 Identities=25% Similarity=0.226 Sum_probs=28.8
Q ss_pred eccCCCeEEeeCCCCC-CChhHHHHHHHHHHHHHHhh
Q 020469 287 WDVKRRLAICGDFCVS-PNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g-~~vegA~~SG~~aA~~l~~~ 322 (326)
....++||.|||-..+ .....|+..|+.+|+.|...
T Consensus 320 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 320 NTNVKGIYAVGDVCGKALLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp BCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHHHHSC
T ss_pred ccCCCCEEEEEecCCCCccHhHHHHHHHHHHHHHcCC
Confidence 3456789999998744 46788999999999998754
No 261
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=21.96 E-value=64 Score=29.60 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=28.0
Q ss_pred ccCCCeEEeeCCCC-C-CChhHHHHHHHHHHHHHHh
Q 020469 288 DVKRRLAICGDFCV-S-PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 288 ~~~~~l~~aGD~~~-g-~~vegA~~SG~~aA~~l~~ 321 (326)
...++||.+||-.. + .....|+..|..+|+.|..
T Consensus 304 t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 339 (468)
T 2qae_A 304 TSIPDVYAIGDVVDKGPMLAHKAEDEGVACAEILAG 339 (468)
T ss_dssp CSSTTEEECGGGBSSSCSCHHHHHHHHHHHHHHHTT
T ss_pred cCCCCEEEeeccCCCCCccHhHHHHHHHHHHHHHcC
Confidence 45679999999876 4 4677899999999999865
No 262
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=21.86 E-value=83 Score=28.87 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=28.5
Q ss_pred eccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~ 321 (326)
....++||.+||-..++ ....|+..|+.+|+.|..
T Consensus 314 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 349 (478)
T 1v59_A 314 NSKFPHIKVVGDVTFGPMLAHKAEEEGIAAVEMLKT 349 (478)
T ss_dssp BCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 34567999999987654 567899999999999975
No 263
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=21.69 E-value=73 Score=32.85 Aligned_cols=37 Identities=11% Similarity=0.104 Sum_probs=30.5
Q ss_pred ccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHhhhc
Q 020469 288 DVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~~l~ 324 (326)
...++||.+||-..++ .+-.|+..|+.+|+.|...|.
T Consensus 471 Ts~~~VfA~GD~~~~~~~~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 471 TSEPWVFAGGDIVGMANTTVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp CSSTTEEECSGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4567899999987654 678899999999999987653
No 264
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=21.64 E-value=65 Score=30.90 Aligned_cols=60 Identities=17% Similarity=0.167 Sum_probs=39.3
Q ss_pred CCCCeeEcceeEeeEEeecC--CC---CeEEEccCCCcc-cccc-EEEeccCCCCCcchhhhcCCCC
Q 020469 88 QPGVESKFGVGVGRFEWLED--KN---LWSVSGLDGQSL-GQFN-GVVASDKNVVSPRFRDVTGRPP 147 (326)
Q Consensus 88 ~l~~~i~~~~~V~~i~~~~~--~~---~w~l~~~~g~~~-~~~d-~VVla~~~~pap~~~~ll~~~~ 147 (326)
+.+.+|++++.|++|..+.. ++ ++++...+|+.+ ..++ -|||+.-.+-.||++.+-++.+
T Consensus 239 r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp 305 (583)
T 3qvp_A 239 RPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGM 305 (583)
T ss_dssp CTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSC
T ss_pred CCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCC
Confidence 34678999999999987211 22 234433455422 2455 5999987788899888876543
No 265
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=21.24 E-value=40 Score=31.17 Aligned_cols=35 Identities=14% Similarity=0.061 Sum_probs=28.4
Q ss_pred CCCeEEeeCCCCCC--ChhHHHHHHHHHHHHHHhhhc
Q 020469 290 KRRLAICGDFCVSP--NVEGAILSGLDAASKLTEILS 324 (326)
Q Consensus 290 ~~~l~~aGD~~~g~--~vegA~~SG~~aA~~l~~~l~ 324 (326)
.++||.|||-..++ .+..|+..|..+|+.|+..+.
T Consensus 359 ~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~ 395 (460)
T 1cjc_A 359 VPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLK 395 (460)
T ss_dssp CTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 47999999976554 377899999999999987653
No 266
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=20.86 E-value=94 Score=30.26 Aligned_cols=52 Identities=12% Similarity=-0.005 Sum_probs=32.5
Q ss_pred HHHHHHhcC---CCCeeEcceeEeeEEeecCCC---CeEEE-ccCCCc-cccccEEEeccCC
Q 020469 80 SICKALCHQ---PGVESKFGVGVGRFEWLEDKN---LWSVS-GLDGQS-LGQFNGVVASDKN 133 (326)
Q Consensus 80 ~l~~~La~~---l~~~i~~~~~V~~i~~~~~~~---~w~l~-~~~g~~-~~~~d~VVla~~~ 133 (326)
.|.+.|.+. .+++|+.++.|.+|.. +++ ++.+. ..+|+. ...+|.||+|+-+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~--~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG 218 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIH--QDGKCYGAVVRDLVTGDIIAYVAKGTLIATGG 218 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEE--ETTEEEEEEEEETTTCCEEEEECSEEEECCCC
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEe--cCCEEEEEEEEECCCCcEEEEEcCEEEEccCc
Confidence 344444433 3688999999999986 333 23332 245642 1268999999644
No 267
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=20.85 E-value=88 Score=28.81 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=28.6
Q ss_pred eccCCCeEEeeCCCCC-CChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVS-PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g-~~vegA~~SG~~aA~~l~~ 321 (326)
....++||.+||-..+ .....|+..|+.+|+.|..
T Consensus 311 ~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~~ 346 (479)
T 2hqm_A 311 NTNVPNIYSLGDVVGKVELTPVAIAAGRKLSNRLFG 346 (479)
T ss_dssp BCSSTTEEECGGGTTSSCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEEecCCCcccHHHHHHHHHHHHHHhcC
Confidence 3456799999998654 4688999999999999874
No 268
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=20.70 E-value=84 Score=29.36 Aligned_cols=35 Identities=20% Similarity=0.040 Sum_probs=28.2
Q ss_pred eccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHh
Q 020469 287 WDVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 287 ~~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~ 321 (326)
....++||.|||-..+ .....|+..|+.+|+.|+.
T Consensus 343 ~Ts~~~IyA~GD~~~g~~~~~~~A~~~g~~aa~~i~g 379 (519)
T 3qfa_A 343 QTNVPYIYAIGDILEDKVELTPVAIQAGRLLAQRLYA 379 (519)
T ss_dssp BCSSTTEEECGGGBSSSCCCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEEeccCCCCccHHHHHHHHHHHHHHHcC
Confidence 3456789999998733 4678999999999999874
No 269
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=20.57 E-value=85 Score=29.85 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=27.9
Q ss_pred ccCCCeEEeeCCCCC--CChhHHHHHHHHHHHHHHh
Q 020469 288 DVKRRLAICGDFCVS--PNVEGAILSGLDAASKLTE 321 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g--~~vegA~~SG~~aA~~l~~ 321 (326)
...++||.+||-..+ ..+..|+..|+.+|+.|..
T Consensus 423 ts~~~VyA~GD~~~~~~~~~~~A~~~g~~aa~~i~~ 458 (598)
T 2x8g_A 423 TTVSNVYAIGDINAGKPQLTPVAIQAGRYLARRLFA 458 (598)
T ss_dssp CSSTTEEECGGGBTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeeecCCCCccHHHHHHhHHHHHHHHhc
Confidence 456799999998544 3688999999999999875
No 270
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=20.38 E-value=86 Score=28.54 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=27.7
Q ss_pred ccCCCeEEeeCCCCCC-ChhHHHHHHHHHHHHHHh
Q 020469 288 DVKRRLAICGDFCVSP-NVEGAILSGLDAASKLTE 321 (326)
Q Consensus 288 ~~~~~l~~aGD~~~g~-~vegA~~SG~~aA~~l~~ 321 (326)
...++||.+||-..++ ....|+..|..+|+.|..
T Consensus 298 t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 298 TSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp CSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTS
T ss_pred cCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 4567999999987654 467799999999999864
No 271
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=20.20 E-value=63 Score=28.60 Aligned_cols=33 Identities=18% Similarity=0.070 Sum_probs=27.8
Q ss_pred CCCeEEeeCCC------CCCChhHHHHHHHHHHHHHHhh
Q 020469 290 KRRLAICGDFC------VSPNVEGAILSGLDAASKLTEI 322 (326)
Q Consensus 290 ~~~l~~aGD~~------~g~~vegA~~SG~~aA~~l~~~ 322 (326)
.+++.++||.. .|.++.-|++++..+|+.|...
T Consensus 278 ~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~ 316 (394)
T 1k0i_A 278 HGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKA 316 (394)
T ss_dssp ETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHH
Confidence 47899999974 4678999999999999998654
No 272
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=20.11 E-value=40 Score=33.30 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=29.0
Q ss_pred CCCeEEeeCCCCCCChhHHHHHHHHHHHHHHhhh
Q 020469 290 KRRLAICGDFCVSPNVEGAILSGLDAASKLTEIL 323 (326)
Q Consensus 290 ~~~l~~aGD~~~g~~vegA~~SG~~aA~~l~~~l 323 (326)
.++||.+||-.....+..|+..|..+|..|...+
T Consensus 666 ~~~VyAiGD~~~~~~~~~A~~~G~~aA~~i~~~l 699 (729)
T 1o94_A 666 IKGIYLIGDAEAPRLIADATFTGHRVAREIEEAN 699 (729)
T ss_dssp CCEEEECGGGTSCCCHHHHHHHHHHHHHTTTSSC
T ss_pred CCCeEEEeCccchhhHHHHHHHHHHHHHHhhhhc
Confidence 3689999998777789999999999999986544
Done!