Query 020474
Match_columns 325
No_of_seqs 234 out of 1620
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 02:40:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020474.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020474hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02895 phosphoacetylglucosam 100.0 2.5E-65 5.4E-70 509.6 29.5 309 6-319 7-322 (562)
2 PTZ00302 N-acetylglucosamine-p 100.0 1.3E-64 2.9E-69 507.6 26.1 307 6-318 11-359 (585)
3 cd03086 PGM3 PGM3 (phosphogluc 100.0 2.6E-61 5.6E-66 481.1 23.9 285 25-319 1-297 (513)
4 KOG2537 Phosphoglucomutase/pho 100.0 5.4E-54 1.2E-58 410.3 21.2 299 11-319 12-320 (539)
5 COG1109 {ManB} Phosphomannomut 100.0 1.1E-36 2.5E-41 302.2 17.8 220 21-320 50-280 (464)
6 PRK14324 glmM phosphoglucosami 100.0 3.5E-36 7.5E-41 297.5 17.0 214 29-319 53-274 (446)
7 PRK14317 glmM phosphoglucosami 100.0 5.2E-36 1.1E-40 297.7 17.0 208 32-319 73-287 (465)
8 PRK14316 glmM phosphoglucosami 100.0 8.1E-36 1.7E-40 295.2 17.5 209 32-320 58-273 (448)
9 cd05802 GlmM GlmM is a bacteri 100.0 2.4E-35 5.2E-40 290.7 16.5 208 32-320 55-269 (434)
10 cd05805 MPG1_transferase GTP-m 100.0 1.6E-35 3.5E-40 292.5 14.7 218 22-318 41-267 (441)
11 PTZ00150 phosphoglucomutase-2- 100.0 2.8E-35 6.1E-40 299.4 16.3 228 21-320 95-339 (584)
12 PRK14318 glmM phosphoglucosami 100.0 5.7E-35 1.2E-39 289.1 17.5 206 32-319 62-274 (448)
13 PRK14315 glmM phosphoglucosami 100.0 6.8E-35 1.5E-39 288.5 17.9 210 32-320 60-276 (448)
14 TIGR01455 glmM phosphoglucosam 100.0 7.4E-35 1.6E-39 287.9 18.1 217 24-319 47-271 (443)
15 PRK14320 glmM phosphoglucosami 100.0 8.3E-35 1.8E-39 287.5 16.2 205 32-318 59-270 (443)
16 PRK10887 glmM phosphoglucosami 100.0 1.3E-34 2.9E-39 286.1 17.0 217 22-319 42-270 (443)
17 cd03089 PMM_PGM The phosphoman 100.0 1.3E-34 2.7E-39 286.3 16.6 212 23-320 44-266 (443)
18 PRK14314 glmM phosphoglucosami 100.0 1.9E-34 4.2E-39 285.5 17.5 210 32-319 60-276 (450)
19 PRK14323 glmM phosphoglucosami 100.0 2.2E-34 4.8E-39 284.3 17.6 200 32-311 60-266 (440)
20 cd05800 PGM_like2 This PGM-lik 100.0 2E-34 4.4E-39 286.1 17.2 218 22-319 46-274 (461)
21 cd03084 phosphohexomutase The 100.0 1.1E-34 2.3E-39 279.1 13.6 208 26-319 2-214 (355)
22 PRK14321 glmM phosphoglucosami 100.0 3.6E-34 7.7E-39 283.4 16.1 207 29-319 50-265 (449)
23 cd05803 PGM_like4 This PGM-lik 100.0 1.9E-33 4.2E-38 278.0 16.3 211 32-319 55-273 (445)
24 cd03087 PGM_like1 This archaea 100.0 2.1E-33 4.7E-38 277.2 15.6 216 22-319 40-265 (439)
25 cd05801 PGM_like3 This bacteri 100.0 3.7E-33 8E-38 280.7 16.7 223 23-320 67-319 (522)
26 PRK15414 phosphomannomutase Cp 100.0 8.2E-33 1.8E-37 274.2 18.9 213 27-320 50-278 (456)
27 PLN02371 phosphoglucosamine mu 100.0 1E-32 2.2E-37 280.3 18.8 229 23-320 123-367 (583)
28 PRK14322 glmM phosphoglucosami 100.0 7.6E-33 1.6E-37 272.5 16.9 201 32-319 55-262 (429)
29 TIGR01132 pgm phosphoglucomuta 100.0 8E-33 1.7E-37 279.4 17.1 219 24-320 86-335 (543)
30 PRK07564 phosphoglucomutase; V 100.0 2.4E-32 5.2E-37 276.0 19.3 225 21-319 82-333 (543)
31 KOG1220 Phosphoglucomutase/pho 100.0 6E-33 1.3E-37 270.2 13.9 237 21-323 108-360 (607)
32 cd05799 PGM2 This CD includes 100.0 2.6E-32 5.7E-37 272.8 17.2 230 22-320 52-297 (487)
33 PRK14319 glmM phosphoglucosami 100.0 2.2E-32 4.8E-37 269.3 16.3 201 32-319 52-259 (430)
34 cd03085 PGM1 Phosphoglucomutas 100.0 2.8E-32 6.2E-37 275.0 17.2 232 21-317 55-308 (548)
35 PRK09542 manB phosphomannomuta 100.0 7.4E-32 1.6E-36 266.6 17.7 213 23-319 43-266 (445)
36 PLN02307 phosphoglucomutase 100.0 5.2E-32 1.1E-36 273.9 16.4 235 21-318 67-333 (579)
37 cd03088 ManB ManB is a bacteri 100.0 3.5E-31 7.6E-36 262.8 16.3 210 23-316 44-262 (459)
38 COG0033 Pgm Phosphoglucomutase 99.8 2E-20 4.2E-25 177.8 9.4 217 30-319 70-312 (524)
39 KOG0625 Phosphoglucomutase [Ca 99.8 3.9E-20 8.5E-25 174.1 9.6 194 57-311 108-310 (558)
40 PF02879 PGM_PMM_II: Phosphogl 99.8 8E-19 1.7E-23 139.9 8.2 97 185-292 1-102 (104)
41 PF02878 PGM_PMM_I: Phosphoglu 99.4 6.6E-14 1.4E-18 117.1 2.0 81 21-117 46-134 (137)
42 PF02878 PGM_PMM_I: Phosphoglu 98.8 2.5E-08 5.5E-13 83.3 8.0 54 125-179 39-92 (137)
43 PRK14316 glmM phosphoglucosami 98.6 3.5E-08 7.6E-13 98.1 5.7 53 126-179 40-92 (448)
44 PRK14323 glmM phosphoglucosami 98.6 4.9E-08 1.1E-12 96.8 5.8 53 126-179 42-94 (440)
45 cd05802 GlmM GlmM is a bacteri 98.6 7.4E-08 1.6E-12 95.4 5.8 53 126-179 37-89 (434)
46 PRK14318 glmM phosphoglucosami 98.6 7.4E-08 1.6E-12 95.8 5.8 53 126-179 44-96 (448)
47 PRK14320 glmM phosphoglucosami 98.6 7.7E-08 1.7E-12 95.5 5.8 52 127-179 42-93 (443)
48 PRK14319 glmM phosphoglucosami 98.4 2E-07 4.3E-12 92.3 5.2 51 127-178 35-85 (430)
49 PRK14317 glmM phosphoglucosami 98.4 2.4E-07 5.2E-12 92.6 5.8 53 126-179 55-107 (465)
50 cd05803 PGM_like4 This PGM-lik 98.4 3.1E-07 6.7E-12 91.3 6.0 53 126-179 37-89 (445)
51 PRK14322 glmM phosphoglucosami 98.4 2.2E-07 4.7E-12 92.0 4.8 49 128-177 39-87 (429)
52 cd05805 MPG1_transferase GTP-m 98.4 6.4E-07 1.4E-11 88.9 8.0 53 126-179 34-86 (441)
53 cd05800 PGM_like2 This PGM-lik 98.4 3.8E-07 8.1E-12 91.0 5.8 53 126-179 39-92 (461)
54 PRK09542 manB phosphomannomuta 98.4 2.5E-07 5.5E-12 91.9 4.5 53 126-179 35-87 (445)
55 PRK10887 glmM phosphoglucosami 98.4 3.8E-07 8.3E-12 90.6 5.7 52 127-179 40-91 (443)
56 PRK14324 glmM phosphoglucosami 98.4 3.8E-07 8.2E-12 90.7 5.6 52 127-179 40-91 (446)
57 cd03087 PGM_like1 This archaea 98.4 3.8E-07 8.3E-12 90.4 5.5 51 127-179 34-84 (439)
58 PRK14315 glmM phosphoglucosami 98.4 4.1E-07 8.9E-12 90.5 5.6 52 127-179 43-94 (448)
59 PRK14314 glmM phosphoglucosami 98.4 8.6E-07 1.9E-11 88.3 7.7 52 127-179 43-94 (450)
60 TIGR01455 glmM phosphoglucosam 98.4 4.6E-07 1E-11 90.0 5.6 51 128-179 40-90 (443)
61 cd03089 PMM_PGM The phosphoman 98.4 4.9E-07 1.1E-11 89.8 5.6 52 127-179 37-88 (443)
62 PRK15414 phosphomannomutase Cp 98.3 4.7E-07 1E-11 90.3 5.1 51 128-179 40-90 (456)
63 PRK14321 glmM phosphoglucosami 98.3 8.3E-07 1.8E-11 88.3 5.4 51 128-179 38-88 (449)
64 cd03088 ManB ManB is a bacteri 98.3 1.2E-06 2.6E-11 87.4 5.7 52 127-179 37-88 (459)
65 COG1109 {ManB} Phosphomannomut 98.2 1.6E-06 3.4E-11 86.7 5.6 52 127-179 45-96 (464)
66 cd05799 PGM2 This CD includes 98.2 2.1E-06 4.6E-11 86.3 5.9 53 126-179 45-98 (487)
67 PLN02371 phosphoglucosamine mu 98.1 3.6E-06 7.8E-11 86.4 5.8 52 127-179 116-169 (583)
68 PRK07564 phosphoglucomutase; V 98.1 8.3E-06 1.8E-10 83.1 7.5 49 128-177 78-129 (543)
69 TIGR01132 pgm phosphoglucomuta 98.0 6E-06 1.3E-10 84.1 5.3 49 128-177 79-130 (543)
70 PTZ00150 phosphoglucomutase-2- 98.0 7.7E-06 1.7E-10 84.0 5.7 52 127-179 90-142 (584)
71 cd03085 PGM1 Phosphoglucomutas 98.0 8.7E-06 1.9E-10 83.0 5.5 51 128-179 51-104 (548)
72 PLN02307 phosphoglucomutase 97.8 3.1E-05 6.7E-10 79.3 5.9 51 128-179 63-119 (579)
73 cd05801 PGM_like3 This bacteri 97.7 4.3E-05 9.3E-10 77.6 5.3 50 128-178 61-113 (522)
74 KOG1220 Phosphoglucomutase/pho 95.0 0.035 7.5E-07 56.0 4.9 52 127-179 103-155 (607)
75 COG0033 Pgm Phosphoglucomutase 88.9 1.5 3.2E-05 43.4 7.3 67 106-179 40-109 (524)
76 TIGR01120 rpiB ribose 5-phosph 71.5 31 0.00067 29.0 8.3 34 128-164 1-34 (143)
77 PRK12615 galactose-6-phosphate 70.3 34 0.00074 29.7 8.5 34 128-164 2-35 (171)
78 PTZ00215 ribose 5-phosphate is 69.1 40 0.00087 28.6 8.5 33 128-163 4-38 (151)
79 PRK08622 galactose-6-phosphate 68.9 40 0.00086 29.3 8.6 35 128-165 2-36 (171)
80 TIGR01119 lacB galactose-6-pho 68.6 40 0.00086 29.3 8.5 34 128-164 2-35 (171)
81 PF02502 LacAB_rpiB: Ribose/Ga 67.7 29 0.00062 29.1 7.3 73 128-228 1-73 (140)
82 TIGR00689 rpiB_lacA_lacB sugar 66.6 38 0.00083 28.5 7.9 72 129-228 1-72 (144)
83 COG0698 RpiB Ribose 5-phosphat 58.7 70 0.0015 27.2 8.0 74 128-228 2-75 (151)
84 KOG2537 Phosphoglucomutase/pho 57.5 3.7 8.1E-05 41.2 0.2 73 23-100 43-116 (539)
85 PRK05571 ribose-5-phosphate is 57.2 69 0.0015 27.1 7.8 33 128-163 2-34 (148)
86 TIGR01118 lacA galactose-6-pho 55.4 93 0.002 26.1 8.2 33 128-163 2-34 (141)
87 TIGR02133 RPI_actino ribose 5- 51.8 98 0.0021 26.1 7.9 33 128-163 2-34 (148)
88 PRK12613 galactose-6-phosphate 51.5 1.2E+02 0.0026 25.5 8.2 33 128-163 2-34 (141)
89 PF12581 DUF3756: Protein of u 50.7 8.4 0.00018 24.5 0.9 24 27-50 1-24 (41)
90 PRK08621 galactose-6-phosphate 48.0 40 0.00086 28.3 4.9 33 128-163 2-34 (142)
91 PF07676 PD40: WD40-like Beta 37.9 77 0.0017 19.5 4.1 27 266-293 3-29 (39)
92 TIGR01118 lacA galactose-6-pho 30.4 1.3E+02 0.0029 25.1 5.4 64 214-285 2-67 (141)
93 PRK08621 galactose-6-phosphate 27.9 1.4E+02 0.0031 25.0 5.1 67 214-288 2-70 (142)
94 PRK12613 galactose-6-phosphate 27.6 1.5E+02 0.0032 24.9 5.2 63 214-285 2-66 (141)
95 PRK08622 galactose-6-phosphate 27.5 1.5E+02 0.0033 25.7 5.4 65 214-284 2-68 (171)
96 PRK05571 ribose-5-phosphate is 26.7 1.6E+02 0.0035 24.8 5.3 67 214-285 2-70 (148)
97 PTZ00215 ribose 5-phosphate is 26.6 1.8E+02 0.0038 24.7 5.5 67 213-285 3-73 (151)
98 TIGR01120 rpiB ribose 5-phosph 26.2 1.6E+02 0.0034 24.8 5.1 66 214-285 1-68 (143)
99 PRK12615 galactose-6-phosphate 26.1 1.8E+02 0.0038 25.3 5.5 66 214-285 2-69 (171)
100 PF02502 LacAB_rpiB: Ribose/Ga 24.7 73 0.0016 26.6 2.8 68 214-287 1-70 (140)
101 TIGR02133 RPI_actino ribose 5- 24.3 4.3E+02 0.0094 22.2 8.7 70 214-288 2-73 (148)
102 PRK13398 3-deoxy-7-phosphohept 24.0 1.2E+02 0.0026 28.2 4.4 37 212-249 196-238 (266)
103 PRK08673 3-deoxy-7-phosphohept 23.5 1.3E+02 0.0029 28.9 4.8 55 212-268 262-322 (335)
104 TIGR01119 lacB galactose-6-pho 23.5 2.2E+02 0.0047 24.7 5.6 66 214-285 2-69 (171)
105 COG3414 SgaB Phosphotransferas 22.6 1.5E+02 0.0032 23.0 4.0 26 213-239 2-32 (93)
106 PF08662 eIF2A: Eukaryotic tra 22.3 44 0.00095 29.2 1.1 27 62-88 157-185 (194)
107 TIGR01501 MthylAspMutase methy 21.0 4.8E+02 0.01 21.5 8.8 32 132-167 10-41 (134)
No 1
>PLN02895 phosphoacetylglucosamine mutase
Probab=100.00 E-value=2.5e-65 Score=509.62 Aligned_cols=309 Identities=63% Similarity=0.942 Sum_probs=269.4
Q ss_pred HHHHHhhccCCCCCCCcceeecchhhhhhccccccceeeeeeehhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCc
Q 020474 6 KSLILKSSSHFPPPPGVKLSYGTAGFRADASILQSTVYRVGILAALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGM 85 (325)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~ygtagfr~~a~~L~~~~~~vgi~~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~ 85 (325)
.++.+.++++|+ |++.+++|||||||..|++|.++++|||+++++|+++.++.+||||||||||++|||+|+++++|+|
T Consensus 7 ~~~~~~~~~~~~-~~~~~~~YGTaGFR~~a~~l~~~~~r~~~~~~~r~~~~~~~~gVmITaSHnp~~~nG~K~~~~~G~~ 85 (562)
T PLN02895 7 ASLLAASSRFPP-PQGVRFSYGTAGFRTDASLLESTVFRVGILAALRSLKTGAATGLMITASHNPVSDNGVKIVDPSGGM 85 (562)
T ss_pred HHHHHHHHhCCC-CCCCceeeechhhHHHHHHHHhcCeEEEEeCCCCccccCCCcEEEEeCCCCCcccCcEEEECCCCCc
Confidence 677888899998 8899999999999999999999999999999999998899999999999999999999999999999
Q ss_pred CCCCccchhhhhhcCCCchhHHHHHHHHHHhcCCCC-CCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeeccee
Q 020474 86 LSQDWEPFSDQLANAPDPQSLVSLIEEFVKKEKIPF-NGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGIL 164 (325)
Q Consensus 86 l~~~~e~~~~~i~n~~~~~~~~~~ie~~~~~~~~~~-~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~ 164 (325)
+.++||++++++||+++.+++.+.+++++.+.++++ .....++|+||||+|+||+.|.+++++||.+. |++|+|+|++
T Consensus 86 ~~~~~e~~a~~laN~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~V~vG~DtR~Ss~~l~~a~~~gl~~~-G~~v~d~G~~ 164 (562)
T PLN02895 86 LPQAWEPFADALANAPDPDALVQLIREFVKKENIPAVGGNPPAEVLLGRDTRPSGPALLAAALKGVRAI-GARAVDMGIL 164 (562)
T ss_pred CCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCccccCcCCEEEEEecCCCCHHHHHHHHHHHHHHC-CCCEEEeCcC
Confidence 999999999999999887789999999988777664 11257899999999999999999999999999 9999999999
Q ss_pred cchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEE-EE
Q 020474 165 TTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIE-VR 243 (325)
Q Consensus 165 tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~-~i 243 (325)
||||+||+++.+|..+.+.++.|++.+.+.|+.++............+.||+|||+||+|+.++++|++.|| +.++ .+
T Consensus 165 tTP~l~~~v~~~n~~~~~~e~~Y~~~l~~~f~~l~~~~~~~~~~~~~~~kvvVDcANGvg~~~~~~l~~~Lg-~~~i~~i 243 (562)
T PLN02895 165 TTPQLHWMVRAANKGMKATESDYFEQLSSSFRALLDLIPNGSGDDRADDKLVVDGANGVGAEKLETLKKALG-GLDLEVR 243 (562)
T ss_pred CcHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHhcCCCccccccCCCEEEEECCCcHHHHHHHHHHHHCC-CcEEEEe
Confidence 999999999999987777889999999999987654433222222224689999999999999999999999 7777 89
Q ss_pred cCCCCCC-CCCCCCCCcchhhhhccCCCCCCCcEE---EEecCcCceeeeeeecCCc-eeeeechhHHHHHHHHHHHhhh
Q 020474 244 NSGKEGG-VLNEGVGADFVQKEKVVPHGFGSNHAG---ISFSGVQVWMEMLIDLSIF-LCHQITAARLILLMATRYYLYS 318 (325)
Q Consensus 244 n~~~d~~-~~n~~~~~~~l~~l~~~v~~~~~ad~G---ia~DgDaDRl~~~~d~~~~-~~~~~~g~~~~~l~~~~~~~~~ 318 (325)
|+++|+. .+|..||+++++.++..+......|+| |+|||||||+++++.++.. .|++++||+|.+|+| .||.+
T Consensus 244 N~~~dG~~~lN~~cGad~v~~lq~vp~~~~~~d~G~~~~sfDGDADRlv~~d~~g~~~~~~llDGDkI~~L~A--~~l~~ 321 (562)
T PLN02895 244 NSGKEGEGVLNEGVGADFVQKEKVPPTGFASKDVGLRCASLDGDADRLVYFYVSSAGSKIDLLDGDKIASLFA--LFIKE 321 (562)
T ss_pred ecCCCCCCCCCCCCccCcHHHHHhhhccCCccCCCCcceEEcCCCCEEEEEEcCCCcccCeEeCHHHHHHHHH--HHHHH
Confidence 9999875 799999999999999554321113899 9999999999866665422 369999999999999 77765
Q ss_pred c
Q 020474 319 L 319 (325)
Q Consensus 319 ~ 319 (325)
+
T Consensus 322 ~ 322 (562)
T PLN02895 322 Q 322 (562)
T ss_pred H
Confidence 4
No 2
>PTZ00302 N-acetylglucosamine-phosphate mutase; Provisional
Probab=100.00 E-value=1.3e-64 Score=507.59 Aligned_cols=307 Identities=36% Similarity=0.553 Sum_probs=266.0
Q ss_pred HHHHHhhccCCCCCC---Ccceeecchhhhhhccc--cccceeeeeeehhhhhccc-C-------CceEEEEccCCCCCC
Q 020474 6 KSLILKSSSHFPPPP---GVKLSYGTAGFRADASI--LQSTVYRVGILAALRSLKT-Q-------CVIGLMITASHNKVT 72 (325)
Q Consensus 6 ~~~~~~~~~~~~~~~---~~~~~ygtagfr~~a~~--L~~~~~~vgi~~~~~~~~~-~-------~~~GVmITASHNP~~ 72 (325)
+.+..+.+++++ .. .-+++|||||||..|+. |.++++|||+++++|++++ + +.+||||||||||++
T Consensus 11 ~~~~~~~~~~~~-~~~~~~~~~~YGTaGFR~~a~~~~L~~v~~r~gila~lrs~~~~~~~~~~~~~~~GImiTASHNp~~ 89 (585)
T PTZ00302 11 QLIELCGSKFPL-RHSAIENPLTYGTAGFRTKAELPPLEPVAYRVGILAALRSFLYGGKRAKRGNKSVGVMITASHNPIQ 89 (585)
T ss_pred HHHHHHHHhccc-ccCCccCceeeeccccCCccccccchHHHHHHHHHHHHHHHHhccccccccccceeEEEeCCCCCcc
Confidence 334445566665 42 23799999999999999 9999999999999999864 4 899999999999999
Q ss_pred CCceEEECCCCCcCCCCccchhhhhhcCCCchhHHHHHHHHHHhcCCCCCC---------CCCceEEeccCCCCChHHHH
Q 020474 73 DNGVKIADPSGGMLSQDWEPFSDQLANAPDPQSLVSLIEEFVKKEKIPFNG---------KHPAEILLGRDTRPSGESLL 143 (325)
Q Consensus 73 ~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~---------~~~~~V~vg~D~r~ss~~L~ 143 (325)
|||+|+++++|+|+.++||+.+++++|+.+.+++.+.+++++.+..+++.. ...++|+||||+|+||++|.
T Consensus 90 ~NG~K~~~~~G~~l~~~~~~~i~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~vGrDtR~Ss~~L~ 169 (585)
T PTZ00302 90 DNGVKIIDPDGGMLEESWEKICTDFANARTGEDLVSVLMDCLTEHGIKLSNLKLDLNKSNCSKAKVHVGRDTRPSSPELV 169 (585)
T ss_pred cCCEEEECCCCCcCCCcHHHHHHHHHhccCHHHHHHHHHHHHHHhCCCccccccccccccCCCCEEEEEEcCCCCHHHHH
Confidence 999999999999999999999999999987778999999998776655431 23679999999999999999
Q ss_pred HHHHHHHH-hhcCCceeecceecchhHHHHHHHhccC----CCCChHHHHHHHHHHHHhhhccCCCCCCC---CCCCCeE
Q 020474 144 EAAKQGIS-AVVGAVAHDMGILTTPQLHWMVRARNKG----LKATESDYFEQLLSSFRCLMNLIPDRGTS---NETEDKL 215 (325)
Q Consensus 144 ~al~~Gl~-s~~G~~v~dlg~~tTP~l~f~v~~~n~~----g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i---~~~~~kI 215 (325)
+++.+||. +. |++|+|+|++||||+||++++.|.. |.+..+.|++.+.+.|+.+++..+..... +....+|
T Consensus 170 ~al~~gl~~~~-G~~v~d~G~~tTP~l~y~v~~~n~~~~~~~~~~e~~Y~~~~~~~f~~l~~~~~~~~~~~~~~~~~~kV 248 (585)
T PTZ00302 170 SALLRGLKLLI-GSNVRNFGIVTTPQLHFLVAFANGLGVDVVESSDELYYAYLLAAFKELYRTLQEGGPVDLTQNNSKIL 248 (585)
T ss_pred HHHHHHHHHhc-CCcEEEeCCCCcHHHHHHHHHhCCCccccCCCcHHHHHHHHHHHHHHHHhhCCccccccccccCCCeE
Confidence 99999999 99 9999999999999999999999976 46778999999999998765544322111 0112589
Q ss_pred EEECCCCChHHHHHHHHHHc---CCccEEEEcCCCCCC-CCCCCCCCcchhhhhccCCCCCCCcEE------EEecCcCc
Q 020474 216 IVDGANGVGGEKLEVIKEKL---NELDIEVRNSGKEGG-VLNEGVGADFVQKEKVVPHGFGSNHAG------ISFSGVQV 285 (325)
Q Consensus 216 vvD~~nG~g~~~~~~ll~~L---g~~~v~~in~~~d~~-~~n~~~~~~~l~~l~~~v~~~~~ad~G------ia~DgDaD 285 (325)
+|||+||+|+.++++|++.| | ++++.+|+++|+. .+|++||+++++.++++|++ .++|+| |+||||||
T Consensus 249 vVD~ANGvg~~~~~~ll~~L~~~g-~~v~~in~~~dg~~~lN~~cGad~vk~lq~~p~~-~~ad~G~~~~~~~sfDGDAD 326 (585)
T PTZ00302 249 VVDCANGVGGYKIKRFFEALKQLG-IEIIPININCDEEELLNDKCGADYVQKTRKPPRA-MKEWPGDEETRVASFDGDAD 326 (585)
T ss_pred EEECCCcHHHHHHHHHHHHhhhCC-CEEEEEecCCCCCCCCCCCCccccHHHHHHHHHh-cCCCcCccCCeeEEECCCCC
Confidence 99999999999999999999 7 7999999999864 79999999999999999999 889999 99999999
Q ss_pred eeeeeee--cCCceeeeechhHHHHHHHHHHHhhh
Q 020474 286 WMEMLID--LSIFLCHQITAARLILLMATRYYLYS 318 (325)
Q Consensus 286 Rl~~~~d--~~~~~~~~~~g~~~~~l~~~~~~~~~ 318 (325)
|++++++ ++...|++++||++++|+| .||.+
T Consensus 327 Rlv~~d~~~~g~~~~~lldGDkI~~L~A--~~l~~ 359 (585)
T PTZ00302 327 RLVYFFPDKDGDDKWVLLDGDRIAILYA--MLIKK 359 (585)
T ss_pred eEEEEEecCCCCccceecCHHHHHHHHH--HHHHH
Confidence 9997766 4666789999999999999 77755
No 3
>cd03086 PGM3 PGM3 (phosphoglucomutase 3), also known as PAGM (phosphoacetylglucosamine mutase) and AGM1 (N-acetylglucosamine-phosphate mutase), is an essential enzyme found in eukaryotes that reversibly catalyzes the conversion of GlcNAc-6-phosphate into GlcNAc-1-phosphate as part of the UDP-N-acetylglucosamine (UDP-GlcNAc) biosynthetic pathway. UDP-GlcNAc is an essential metabolite that serves as the biosynthetic precursor of many glycoproteins and mucopolysaccharides. AGM1 is a member of the alpha-D-phosphohexomutase superfamily, which catalyzes the intramolecular phosphoryl transfer of sugar substrates. The alpha-D-phosphohexomutases have four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=2.6e-61 Score=481.13 Aligned_cols=285 Identities=45% Similarity=0.716 Sum_probs=248.7
Q ss_pred eecchhhhhhccccccceeeeeeehhhhhccc-CCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCc
Q 020474 25 SYGTAGFRADASILQSTVYRVGILAALRSLKT-QCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDP 103 (325)
Q Consensus 25 ~ygtagfr~~a~~L~~~~~~vgi~~~~~~~~~-~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~ 103 (325)
+|||||||..|+.|.++++|||+++++|++.. ++.+||||||||||++|||||+++++|+++.++||+.+++++|+.+.
T Consensus 1 ~YGtaGfr~~~~~l~~~~~r~~~~~~~~~~~~~~~~~gimITaSHNP~~~NGiK~~~~~g~~~~~~~~~~~~~~~~~~~~ 80 (513)
T cd03086 1 SYGTAGFRTKAELLDSVVFRVGILAALRSKKLGGKTIGVMITASHNPVEDNGVKIVDPDGEMLEESWEPYATQLANASDD 80 (513)
T ss_pred CCcccccCCChhhhhHHHHHHHHHHHHHHHHhCCCceEEEECCCcCCcccCeEEEEcCCCCCCCHHHHHHHHHHhhCCCH
Confidence 59999999999999999999999999999975 45899999999999999999999999999999999999999998874
Q ss_pred hhHHHHHHHHH--HhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCC-
Q 020474 104 QSLVSLIEEFV--KKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGL- 180 (325)
Q Consensus 104 ~~~~~~ie~~~--~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g- 180 (325)
++...+.... ....... ..+++|+||||+|+||++|++++++||.+. |++|+|+|.+|||++||+++.+|+.|
T Consensus 81 -~~~~~~~~~~~~~~~~~~~--~~~~~V~vg~D~R~ss~~l~~a~~~gl~~~-G~~V~d~g~~~TP~~~~~v~~~~~~g~ 156 (513)
T cd03086 81 -ELLVLVLMLISVKELNIDL--SVPANVFVGRDTRPSGPALLQALLDGLKAL-GGNVIDYGLVTTPQLHYLVRAANTEGA 156 (513)
T ss_pred -HHHHHHHHHHhhhhhccCC--CCCCEEEEEeCCChhHHHHHHHHHHHHHHC-CCeEEEccCcCcHHHHHHHHhcCCCCc
Confidence 3444444433 2222222 267899999999999999999999999999 99999999999999999999999763
Q ss_pred --CCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCC-ccEEEEcCCCCCC-CCCCCC
Q 020474 181 --KATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNE-LDIEVRNSGKEGG-VLNEGV 256 (325)
Q Consensus 181 --~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~-~~v~~in~~~d~~-~~n~~~ 256 (325)
....+.|+++|.+.|+.++... ..++.+++||+|||+||+|+.++++||+.||. |+++.+|++|||. .+|++|
T Consensus 157 ~~~~~~~~Y~~~l~~~f~~lv~~~---~~~~~~~~kVvvD~aNGag~~~~~~ll~~Lg~~~~v~~in~~~dg~~~~n~~~ 233 (513)
T cd03086 157 YGEPTEEGYYEKLSKAFNELYNLL---QDGGDEPEKLVVDCANGVGALKLKELLKRLKKGLSVKIINDGEEGPELLNDGC 233 (513)
T ss_pred cCCccHHHHHHHHHHHHHHHHhhc---cccccCCCEEEEECCCcHHHHHHHHHHHHcCCCcEEEEEccCCCCcccCCCCc
Confidence 4457789999999987655433 23445689999999999999999999999993 6999999999987 699999
Q ss_pred CCcchhhhhccCCCCCC----CcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 257 GADFVQKEKVVPHGFGS----NHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 257 ~~~~l~~l~~~v~~~~~----ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++++++.+++.|++ .+ +|+|++|||||||+++++++++..|++++||++++|++ .|+++.
T Consensus 234 ga~~l~~l~~~v~~-~~~~~~adlgiA~DGDADRl~~vd~~g~~~~~~l~GD~i~aL~a--~~ll~~ 297 (513)
T cd03086 234 GADYVKTKQKPPRG-FELKPPGVRCCSFDGDADRLVYFYPDSSNKFHLLDGDKIATLFA--KFIKEL 297 (513)
T ss_pred ccccHHHHHHHHHh-cCCCCCccEEEEECCCCCcEEEEEecCCCceEEECHHHHHHHHH--HHHHHh
Confidence 99999999999988 54 99999999999999988887778899999999999999 778763
No 4
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.4e-54 Score=410.35 Aligned_cols=299 Identities=42% Similarity=0.629 Sum_probs=253.9
Q ss_pred hhccCCCCCCCcceeecchhhhhhccccccceeeeeeehhhhhcc-cCCceEEEEccCCCCCCCCceEEECCCCCcCCCC
Q 020474 11 KSSSHFPPPPGVKLSYGTAGFRADASILQSTVYRVGILAALRSLK-TQCVIGLMITASHNKVTDNGVKIADPSGGMLSQD 89 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~ygtagfr~~a~~L~~~~~~vgi~~~~~~~~-~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~ 89 (325)
.++.+++ |++..++|||||||..|+.|.++.+|+|++++||+++ .+..+||||||||||.+|||+|+.+++|.|++++
T Consensus 12 ~sd~~~~-~~~~~~~YGTaGfR~ka~~L~~v~fr~g~~a~lRS~~l~gs~IGvMiTASHNp~~dNGvKivd~~g~ml~~~ 90 (539)
T KOG2537|consen 12 SSELHAK-TSKEKFSYGTAGFRTKAEDLDSVMFRMGVLAVLRSRKLGGSTIGVMITASHNPVEDNGVKIVDPSGEMLAAS 90 (539)
T ss_pred hhhcccc-ccccceeeecceeecchhhcchHHhhhHHHHHHHHHHhcCCeeEEEEEeccCchhhcCccccCCccchhhhh
Confidence 4467777 9999999999999999999999999999999999998 4688999999999999999999999999999999
Q ss_pred ccchhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhH
Q 020474 90 WEPFSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQL 169 (325)
Q Consensus 90 ~e~~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l 169 (325)
||+++++++|+.+.+ +..++.++++++.+.. +..++|++|+|+|+|++.|.+++.+|+.++ .+++.|+|++||||+
T Consensus 91 WE~~a~~~vNa~~~~-l~~~l~kil~~~~~~~--t~~~~v~~G~DtR~s~~~L~~~~~~~~~~l-~a~~~d~GvvtTPqL 166 (539)
T KOG2537|consen 91 WEEYATQLVNASSQA-LERELAKILEKEALGT--TVSAHVVVGRDTRPSSPRLLNAVRDGVGAL-FAQVDDYGVVTTPQL 166 (539)
T ss_pred hhhhhCceecCCcHH-HHHHHHHHHhHhhccC--cccceEEEecCCCCccHHHHHHHHHHHHhh-heEecceEEEcchhh
Confidence 999999999998743 7777777776654332 377899999999999999999999999988 589999999999999
Q ss_pred HHHHHHhccCC-----CCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCC-ccEEEE
Q 020474 170 HWMVRARNKGL-----KATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNE-LDIEVR 243 (325)
Q Consensus 170 ~f~v~~~n~~g-----~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~-~~v~~i 243 (325)
||+|+..|..+ ....++|++.+.+.|..+........ ....|+.|||+||+|+..++.+...... .+++++
T Consensus 167 Hy~v~~~n~~~~~~~~~~t~~~Y~~~ls~af~~l~~~~~~~~---~~~~k~~VD~ANGvG~~klk~l~~i~~~~l~vEiv 243 (539)
T KOG2537|consen 167 HYMVRASNTKGAYGKGKPTEEGYYSKLSKAFNELRNITQESG---DEVSKLIVDCANGVGAPKLKELLGIDSGLLNVEVV 243 (539)
T ss_pred hhhhhhcccccccccCCCCcccHHHHHHHHHHHhhhhccccC---CccceEEEECccccchHHHHHHhccCCCcCceEEE
Confidence 99999999752 56778999999999986432221111 1246999999999999999998874332 689999
Q ss_pred cCCCCCCCCCCCCCCcchhhhhccCCCCCCCcE---EEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 244 NSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHA---GISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 244 n~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~---Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
|...|++.+|..||+++++.-+++|.++.++.. .++|||||||+..+.-..+-..|+|+||.+..||+ .||.++
T Consensus 244 Nd~~dpelLN~~CGADFVkt~QkpP~~~~~~~~~~~caSfDGDADRlvyf~~~~~~~f~llDGDkistlla--~~l~~l 320 (539)
T KOG2537|consen 244 NDGIDPGLLNNGCGADFVKTKQKPPKGLSPIKANTRCASFDGDADRLVYFYIDDDSEFHLLDGDKIATLIA--GYLREL 320 (539)
T ss_pred cCCCChhhhccccccchhhccccCCCCCCCCCCCCceeeeecccceeEEEEecCCceeEeecchHHHHHHH--HHHHHH
Confidence 998888999999999999999999987543433 38999999999854443444589999999999999 887543
No 5
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=302.24 Aligned_cols=220 Identities=25% Similarity=0.269 Sum_probs=173.0
Q ss_pred Ccceeecchhh-hhhccccccceeeeeeeh-------hhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccc
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGILA-------ALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEP 92 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~~-------~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~ 92 (325)
++|.++..--| +..+..|.+.|++|..+- +|.++++++.+||||||||||++|||||+++++|.+++++.|
T Consensus 50 G~D~R~ss~~~~~a~~~gl~~~G~~v~~~g~~pTP~~~f~~~~~~~~~gvmITASHNP~~yNGiK~~~~~G~~i~~~~e- 128 (464)
T COG1109 50 GRDTRLSSEMLAAALAAGLTSAGIDVYDLGLVPTPAVAFATRKLGADAGVMITASHNPPEYNGIKFFGSDGGKISDDIE- 128 (464)
T ss_pred EecCCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCHHHHHHHHhcCCCeEEEEecCCCCchhCcEEEEcCCCCcCChHHH-
Confidence 45666666677 688889999999998883 456677888999999999999999999999999999999776
Q ss_pred hhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHH
Q 020474 93 FSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWM 172 (325)
Q Consensus 93 ~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~ 172 (325)
++|++.+.... .+. ++... .. | .+..
T Consensus 129 ---------------~~Ie~~~~~~~-~~~-------------~~~~~-----------~~-g-~~~~------------ 154 (464)
T COG1109 129 ---------------EEIEAILAEEV-DLP-------------RPSWG-----------EL-G-RLKR------------ 154 (464)
T ss_pred ---------------HHHHHHHhccc-ccc-------------ccccc-----------cC-C-ceeE------------
Confidence 35555554331 111 00000 01 2 1111
Q ss_pred HHHhccCCCC-ChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCC
Q 020474 173 VRARNKGLKA-TESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGV 251 (325)
Q Consensus 173 v~~~n~~g~~-~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~ 251 (325)
.+ ..+.|++++.+.++.. .+.+++||++||+||+++.+++++|++|| ++++.+++.|||.|
T Consensus 155 --------~~~~~~~Y~~~i~~~~~~~---------~~~~~lkVv~d~~nGaa~~~~~~ll~~lG-~~vv~~~~~pDg~f 216 (464)
T COG1109 155 --------IPDALDRYIEFIKSLVDVD---------LKLRGLKVVVDCANGAAGLVAPRLLKELG-AEVVSINCDPDGLF 216 (464)
T ss_pred --------cchhHHHHHHHHHHhcccc---------cccCCcEEEEECCCCchhHHHHHHHHHcC-CEEEEecCCCCCCC
Confidence 23 5788999999988642 11236999999999999999999999999 99999999999977
Q ss_pred --CCCCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 252 --LNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 252 --~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
.+|+|.++++..+++.+++ .++|+|++|||||||+++ +|+. +++++||++++||+ .||++.+
T Consensus 217 p~~~p~p~~~~~~~l~~~v~~-~~aDlgia~DgDaDR~~~-vd~~---G~~~~Gd~i~~lla--~~l~~~~ 280 (464)
T COG1109 217 PNINPNPGETELLDLAKAVKE-HGADLGIAFDGDADRLIV-VDER---GNFVDGDQILALLA--KYLLEKG 280 (464)
T ss_pred CCCCCCCCCccHHHHHHHHHh-cCCCEEEEecCCCceEEE-EcCC---CCEeCccHHHHHHH--HHHHhcC
Confidence 5688888888899999998 799999999999999986 5543 38999999999999 8887754
No 6
>PRK14324 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=3.5e-36 Score=297.50 Aligned_cols=214 Identities=25% Similarity=0.303 Sum_probs=166.3
Q ss_pred hhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcC
Q 020474 29 AGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANA 100 (325)
Q Consensus 29 agf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~ 100 (325)
.-| |..++.|.+.|++|..+ ..|..++.++.+||||||||||++|||||+++++|.++++++|
T Consensus 53 ~~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~a~~~~~~~gGI~ITaSHNP~~~nGiK~~~~~G~~i~~~~~--------- 123 (446)
T PRK14324 53 YMIENALVSGLTSVGYNVIQIGPMPTPAIAFLTEDMRCDAGIMISASHNPYYDNGIKFFDSYGNKLDEEEE--------- 123 (446)
T ss_pred HHHHHHHHHHHHHCCCeEEEecCccHHHHHHHHhhcCCceEEEEEcCCCChhHCCEEEECCCCCCCCHHHH---------
Confidence 344 57788899998888877 2455667889999999999999999999999999999998555
Q ss_pred CCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCC
Q 020474 101 PDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGL 180 (325)
Q Consensus 101 ~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g 180 (325)
++|++++..+.+. . ..+.... .. |. +...
T Consensus 124 -------~~Ie~~~~~~~~~-~-----------~~~~~~~-----------~~-g~-~~~~------------------- 152 (446)
T PRK14324 124 -------KEIEEIFFDEELI-Q-----------SSQKTGE-----------EI-GS-AKRI------------------- 152 (446)
T ss_pred -------HHHHHHHhccccc-c-----------ccccchh-----------hC-ee-eEec-------------------
Confidence 4677766433210 0 0010000 01 21 1110
Q ss_pred CCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcc
Q 020474 181 KATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADF 260 (325)
Q Consensus 181 ~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~ 260 (325)
.+..+.|+++|.+.++.. ++.+++||+|||+||+++.+++.+|++|| |+++.+|+.|||.++|+.|++++
T Consensus 153 ~~~~~~Y~~~l~~~i~~~---------~~~~~lkVvvD~~nGa~~~~~~~ll~~lG-~~v~~i~~~~dg~~~~~~~~~~~ 222 (446)
T PRK14324 153 DDVIGRYIVHIKNSFPKD---------LTLKGLRIVLDTANGAAYKVAPTVFSELG-ADVIVINDEPNGFNINENCGALH 222 (446)
T ss_pred ccHHHHHHHHHHHhcCCc---------cCCCCCEEEEECCCchHHHHHHHHHHHcC-CeEEEECCCCCCCCCCCCCCCCC
Confidence 346788999998877521 11247999999999999999999999999 99999999999999999999999
Q ss_pred hhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 261 VQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 261 l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.+++.|+. .++|+|++|||||||+++++++ +.++++|++++|++ .||++.
T Consensus 223 ~e~l~~~v~~-~~adlGia~DgDgDR~~vvd~~----G~~l~~d~~~~l~a--~~ll~~ 274 (446)
T PRK14324 223 PENLAQEVKR-YRADIGFAFDGDADRLVVVDEK----GEIVHGDKLLGVLA--VYLKEK 274 (446)
T ss_pred HHHHHHHHHh-CCCCEEEEECCCCceEEEECCC----CCEeCHHHHHHHHH--HHHHHh
Confidence 9999999999 9999999999999999855443 36999999999998 677664
No 7
>PRK14317 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=5.2e-36 Score=297.70 Aligned_cols=208 Identities=22% Similarity=0.222 Sum_probs=164.4
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..+..|.+.|++|..+ ..|..++.++.+||||||||||++|||||+++++|.+++++.+
T Consensus 73 ~a~~~gL~s~Gv~V~~~g~~pTP~~~~av~~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~------------- 139 (465)
T PRK14317 73 MALAAGLTAAGREVWHLGLCPTPAVAYLTRKSEAIGGLMISASHNPPEDNGIKFFGADGTKLSPELQ------------- 139 (465)
T ss_pred HHHHHHHHHCCCeEEEecccCcHHHHHHHHhcCCCEEEEEeCCCCCcccCCEEEEcCCCCcCCHHHH-------------
Confidence 57788898888888776 2455667889999999999999999999999999999988544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++||+.+..+.. . +.... .. |. +. .+ .+..
T Consensus 140 ---~~Ie~~~~~~~~--~-------------~~~~~-----------~~-g~-~~------~~-------------~~~~ 169 (465)
T PRK14317 140 ---AQIEAGLRGELS--S-------------SDNAS-----------NW-GR-HY------HR-------------PELL 169 (465)
T ss_pred ---HHHHHHHhcccc--c-------------ccchh-----------cC-Cc-eE------ec-------------CChH
Confidence 466665543210 0 00000 01 21 11 11 3567
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++.. ++.+++||+|||+||+++.+++++|++|| |+++.+|+.|||.+++++|++++++.+
T Consensus 170 ~~Y~~~l~~~id~~---------i~~~~~kVvvD~~nG~~~~~~~~ll~~LG-~~v~~l~~~~dg~~~~~~~~~~~l~~l 239 (465)
T PRK14317 170 DDYRDALLESLPDR---------VNLQGVKIVLDLAWGAAVACAPEVFKALG-AEVICLHDQPDGDRINVNCGSTHLEPL 239 (465)
T ss_pred HHHHHHHHHhcCcc---------cccCCCEEEEECCCchHHHHHHHHHHHcC-CeEEEEecccCCCCCCCCCchHhHHHH
Confidence 88999998877531 12347999999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.|++ .++|+|++|||||||+++ +|+. +.+++||++++|++ .||++.
T Consensus 240 ~~~v~~-~~adlGia~DgDgDR~~~-vd~~---G~~i~~d~l~~l~a--~~ll~~ 287 (465)
T PRK14317 240 QAAVLE-HGADMGFAFDGDADRVLA-VDGQ---GRVVDGDHILYLWG--SHLQEQ 287 (465)
T ss_pred HHHHHh-cCCCEEEEECCCCcEEEE-ECCC---CCEEChhHHHHHHH--HHHHHh
Confidence 999999 999999999999999985 4544 48999999999998 777764
No 8
>PRK14316 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=8.1e-36 Score=295.18 Aligned_cols=209 Identities=26% Similarity=0.311 Sum_probs=164.3
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..+..++.++.+||||||||||++|||||+++++|.+++++.+
T Consensus 58 ~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGi~ITaSHnp~~~nGiK~~~~~G~~i~~~~~------------- 124 (448)
T PRK14316 58 SALIAGLLSVGAEVMRLGVIPTPGVAYLTRALGADAGVMISASHNPVEDNGIKFFGSDGFKLSDEQE------------- 124 (448)
T ss_pred HHHHHHHHHCCCEEEEecccchHHHHHHHHHhcCcEEEEEEecCCChhhCcEEEEcCCCCcCCHHHH-------------
Confidence 46778899888888776 2455667889999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++++.+...++. |.... .. |. +.. . .+..
T Consensus 125 ---~~Ie~~~~~~~~~~~-------------~~~~~-----------~~-g~-~~~------~-------------~~~~ 156 (448)
T PRK14316 125 ---DEIEALLDAEEDTLP-------------RPSGE-----------GL-GT-VSD------Y-------------PEGL 156 (448)
T ss_pred ---HHHHHHHhccccccc-------------cCccc-----------cc-ee-EEE------e-------------CcHH
Confidence 467766643210111 11000 01 21 111 0 3456
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++. . .+++||++||+||+++.+++++|++|| |+++.+|+.||+.++|++|++++++.+
T Consensus 157 ~~Y~~~l~~~i~~--~---------~~~lkvvvD~~nG~~~~~~~~ll~~lg-~~v~~in~~~dg~~~~~~~~~~~~~~l 224 (448)
T PRK14316 157 RKYLQFLKSTIDE--D---------LSGLKVALDCANGATSSLAPRLFADLG-ADVTVIGTSPDGLNINDGVGSTHPEAL 224 (448)
T ss_pred HHHHHHHHHhcCc--c---------cCCCEEEEECCCchhhHHHHHHHHHcC-CeEEEEccCCCCCCCCCCCCCCCHHHH
Confidence 7799999887752 1 136999999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
++.|++ .++|+|++|||||||+++ +|+. +++++||++++|++ .||++..
T Consensus 225 ~~~v~~-~~adlGia~DgDaDR~~~-vd~~---G~~i~~d~~~~l~a--~~ll~~~ 273 (448)
T PRK14316 225 QELVVE-KGADLGLAFDGDADRLIA-VDEN---GNIVDGDKIMFICG--KYLKEKG 273 (448)
T ss_pred HHHHhh-cCCCEEEEEcCCCceEEE-ECCC---CCEeCHHHHHHHHH--HHHHHhC
Confidence 999999 999999999999999975 4544 47999999999999 8887653
No 9
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=2.4e-35 Score=290.70 Aligned_cols=208 Identities=25% Similarity=0.278 Sum_probs=164.1
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..+..|.+.|++|..+ ..|..++.++++||||||||||++|||||+++++|.+++++++
T Consensus 55 ~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~------------- 121 (434)
T cd05802 55 SALAAGLTSAGVDVLLLGVIPTPAVAYLTRKLRADAGVVISASHNPFEDNGIKFFSSDGYKLPDEVE------------- 121 (434)
T ss_pred HHHHHHHHHCCCcEEEEcccchHHHHHHHHHhCCCeEEEEEecCCchhhCCEEEECCCCCcCCHHHH-------------
Confidence 56677888888887766 2455667889999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++++.++.. . +.... .. |. +.. . .+..
T Consensus 122 ---~~i~~~~~~~~~--~-------------~~~~~-----------~~-g~-~~~------~-------------~~~~ 151 (434)
T cd05802 122 ---EEIEALIDKELE--L-------------PPTGE-----------KI-GR-VYR------I-------------DDAR 151 (434)
T ss_pred ---HHHHHHHhCccc--c-------------ccccc-----------cC-ee-EEE------c-------------cchH
Confidence 467666644311 0 10000 01 21 111 0 3566
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|+++|.+.++... .+++||++||+||+++.+++++|++|| |+++.+|+++|+.++|++|++++++.+
T Consensus 152 ~~Y~~~l~~~~~~~~----------~~~lkVvvD~~nG~~~~~~~~ll~~lg-~~v~~in~~~dg~~~~~~~~~~~~~~l 220 (434)
T cd05802 152 GRYIEFLKSTFPKDL----------LSGLKIVLDCANGAAYKVAPEVFRELG-AEVIVINNAPDGLNINVNCGSTHPESL 220 (434)
T ss_pred HHHHHHHHHhcCccc----------cCCCEEEEECCCchHHHHHHHHHHHcC-CeEEEecCCCCCCCCCCCCCccCHHHH
Confidence 889999988876310 137999999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
++.|+. .++|+|++|||||||++++ |+. ++++++|++++|++ .|+++..
T Consensus 221 ~~~v~~-~~adlGia~DgDgDR~~~v-d~~---G~~i~~d~~~~l~a--~~l~~~~ 269 (434)
T cd05802 221 QKAVLE-NGADLGIAFDGDADRVIAV-DEK---GNIVDGDQILAICA--RDLKERG 269 (434)
T ss_pred HHHHHh-cCCCEEEEEcCCCceEEEE-CCC---CCEeCHHHHHHHHH--HHHHHhC
Confidence 999999 9999999999999999854 543 37999999999998 7777653
No 10
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=100.00 E-value=1.6e-35 Score=292.52 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=164.9
Q ss_pred cceeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccch
Q 020474 22 VKLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPF 93 (325)
Q Consensus 22 ~~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~ 93 (325)
.|.+.-+.-| +..|+.|.+.|++|..+ .+|..++.++.+||||||||||++|||||+++++|.++.++++
T Consensus 41 ~D~R~ss~~~~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGi~ITaSHnp~~~nGiK~~~~~G~~i~~~~~-- 118 (441)
T cd05805 41 RDASRASRMLKRALISGLLSTGVNVRDLGALPLPVARYAIRFLGASGGIHVRTSPDDPDKVEIEFFDSRGLNISRAME-- 118 (441)
T ss_pred cCCChhHHHHHHHHHHHHHhCCCeEEecCCcCchHHHHHHHhcCCCeeEEEEeCCCCccceEEEEECCCCCcCCHHHH--
Confidence 3444444455 47788899999999877 2456667889999999999999999999999999999998655
Q ss_pred hhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHH
Q 020474 94 SDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMV 173 (325)
Q Consensus 94 ~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v 173 (325)
++|++.+..+.+. +.... .. |. +.. .
T Consensus 119 --------------~~Ie~~~~~~~~~---------------~~~~~-----------~~-g~-~~~------~------ 144 (441)
T cd05805 119 --------------RKIENAFFREDFR---------------RAHVD-----------EI-GD-ITE------P------ 144 (441)
T ss_pred --------------HHHHHHHhhhhhc---------------cccHh-----------hc-Cc-ccc------c------
Confidence 3666655432110 00000 01 21 100 0
Q ss_pred HHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCC-CC
Q 020474 174 RARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGG-VL 252 (325)
Q Consensus 174 ~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~-~~ 252 (325)
.+..+.|++++.+.++.. .++++++||+|||+||+++.+++++|++|| |+++.+|+.+|+. ++
T Consensus 145 -------~~~~~~Y~~~l~~~i~~~--------~i~~~~lkIvvd~~~G~~~~~~~~ll~~lG-~~v~~i~~~~d~~~~~ 208 (441)
T cd05805 145 -------PDFVEYYIRGLLRALDTS--------GLKKSGLKVVIDYAYGVAGIVLPGLLSRLG-CDVVILNARLDEDAPR 208 (441)
T ss_pred -------hhHHHHHHHHHHHHhCHH--------HHhhcCCeEEEECCCchHHHHHHHHHHHcC-CEEEEEecccCCccCC
Confidence 245678999998877531 111237999999999999999999999999 9999999999885 45
Q ss_pred CCCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhh
Q 020474 253 NEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYS 318 (325)
Q Consensus 253 n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~ 318 (325)
+++|.+++++.+++.+++ .++|+|++|||||||++++++++ .+++||++++|++ .||++
T Consensus 209 ~~~~~~~~l~~l~~~v~~-~~adlgia~DgDaDR~~vvd~~G----~~~~gd~l~~l~a--~~ll~ 267 (441)
T cd05805 209 TDTERQRSLDRLGRIVKA-LGADFGVIIDPNGERLILVDEAG----RVISDDLLTALVS--LLVLK 267 (441)
T ss_pred CCccchhHHHHHHHHHHh-CCCCEEEEEcCCCCEEEEECCCC----CEEChhHHHHHHH--HHHHH
Confidence 556667899999999999 99999999999999999664443 6789999999998 77765
No 11
>PTZ00150 phosphoglucomutase-2-like protein; Provisional
Probab=100.00 E-value=2.8e-35 Score=299.42 Aligned_cols=228 Identities=17% Similarity=0.227 Sum_probs=165.4
Q ss_pred Ccceeecchhh-hhhccccccceeeeeeeh--------hhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCcc
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGILA--------ALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWE 91 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~~--------~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e 91 (325)
++|-++.+.-| +..|++|.+.|++|.++. +|.++++++.+||||||||||++|||||+++++|+++.+..+
T Consensus 95 g~D~R~~S~~fa~~~a~~L~a~Gi~V~~~g~~~pTP~lsfav~~~~a~gGImITASHNP~eyNGiK~~~~~G~~i~~~~~ 174 (584)
T PTZ00150 95 GYDGRYHSRRFAEITASVFLSKGFKVYLFGQTVPTPFVPYAVRKLKCLAGVMVTASHNPKEDNGYKVYWSNGAQIIPPHD 174 (584)
T ss_pred EeCCCCCcHHHHHHHHHHHHHCCCEEEEeCCCCCcHHHHHHHHHhCCCeEEEEeccCCCCCCCCEEEeCCCCcccCCccc
Confidence 34555555666 688999999999999993 455667899999999999999999999999999999988654
Q ss_pred chhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHH
Q 020474 92 PFSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHW 171 (325)
Q Consensus 92 ~~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f 171 (325)
+ ++.+.|++.+.. +. .+.+... . + .+.+ .+
T Consensus 175 ~------------~i~~~Ie~~~~~----~~----------~~~~~~~-------------~-~-~~~~-----~~---- 204 (584)
T PTZ00150 175 K------------NISAKILSNLEP----WS----------SSWEYLT-------------E-T-LVED-----PL---- 204 (584)
T ss_pred H------------HHHHHHHHhccc----cc----------cchhhhc-------------c-c-cccc-----hh----
Confidence 2 122334332210 00 0000000 0 0 0000 00
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCcc---EEEEcCCCC
Q 020474 172 MVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELD---IEVRNSGKE 248 (325)
Q Consensus 172 ~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~---v~~in~~~d 248 (325)
.+..+.|++++.+.++.. .++.+++|||+||+||+++.+++++|++|| |+ ++..++.||
T Consensus 205 ---------~d~~~~Yi~~l~~~i~~~--------~i~~~~lkIv~d~~~G~g~~~~~~iL~~lG-~~~~~~v~~~~~pD 266 (584)
T PTZ00150 205 ---------AEVSDAYFATLKSEYNPA--------CCDRSKVKIVYTAMHGVGTRFVQKALHTVG-LPNLLSVAQQAEPD 266 (584)
T ss_pred ---------hhhHHHHHHHHHhhcChh--------hhccCCCeEEEeCCCCccHHHHHHHHHhcC-CCCceEeccccccC
Confidence 234678999998776421 112247999999999999999999999999 86 566788899
Q ss_pred CCCCC---CCC--CCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 249 GGVLN---EGV--GADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 249 ~~~~n---~~~--~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
|.|++ |+| ++++++.+.+.+++ .++|+|+++||||||++++++.++ .|++++|||+++|++ +||++.+
T Consensus 267 g~Fp~~~~PnPe~~~~~l~~~~~~v~~-~~adlgia~DpDaDR~~vvd~~g~-~~~~l~gd~l~aLla--~~ll~~~ 339 (584)
T PTZ00150 267 PEFPTVTFPNPEEGKGALKLSMETAEA-HGSTVVLANDPDADRLAVAEKLNN-GWKIFTGNELGALLA--WWAMKRY 339 (584)
T ss_pred cCCCCCCCcChhhhHHHHHHHHHHHHH-hCCCEEEEeCCCCCceEEEEEcCC-ceEEcChhHHHHHHH--HHHHHhh
Confidence 87643 232 24668888888888 899999999999999997776554 799999999999999 7887754
No 12
>PRK14318 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=5.7e-35 Score=289.05 Aligned_cols=206 Identities=22% Similarity=0.293 Sum_probs=162.2
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..+..++.++.+||||||||||++|||||+++++|.+++++.|
T Consensus 62 ~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~------------- 128 (448)
T PRK14318 62 AAVSAGLASAGVDVLRVGVLPTPAVAYLTAALDADFGVMISASHNPMPDNGIKFFAAGGHKLPDDVE------------- 128 (448)
T ss_pred HHHHHHHHHCCCEEEEecccCchHHHHHHHhcCCCEEEEEEcCCCCcccCCEEEEcCCCCcCCHHHH-------------
Confidence 46677788888887766 2355667889999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++.+.++.. . +.... .. |. + ... .+..
T Consensus 129 ---~~Ie~~~~~~~~--~-------------~~~~~-----------~~-g~-~------~~~-------------~~~~ 158 (448)
T PRK14318 129 ---DRIEAVLGQLPW--L-------------RPTGA-----------GV-GR-V------IDA-------------PDAT 158 (448)
T ss_pred ---HHHHHHHhccCc--c-------------ccccc-----------cC-ce-E------EEC-------------CcHH
Confidence 467766643211 1 10000 01 21 1 111 3567
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++. + ++++||++||+||+++.+++++|++|| |+++.+|+.||+.++|+.|++++++.+
T Consensus 159 ~~Y~~~l~~~i~~--~---------~~~~kVvvD~~nG~~~~~~~~ll~~lG-~~v~~in~~~dg~~~~~~~~~~~l~~l 226 (448)
T PRK14318 159 DRYLRHLLGALPT--R---------LDGLKVVVDCAHGAASGVAPEAYRAAG-ADVIAINADPDGLNINDGCGSTHLEQL 226 (448)
T ss_pred HHHHHHHHHHhcc--c---------cCCCEEEEECCCchHHHHHHHHHHHcC-CEEEEeccCCCCCCCCCCCCCCCHHHH
Confidence 8899999887752 1 237999999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.|+. .++|+|++|||||||+++ +|+. ++++++|++++|++ .|+.+.
T Consensus 227 ~~~v~~-~~adlGia~DgD~DR~~~-vd~~---G~~l~~d~~~~l~a--~~l~~~ 274 (448)
T PRK14318 227 QAAVVA-HGADLGLAHDGDADRCLA-VDAN---GNVVDGDQIMAILA--LAMKEA 274 (448)
T ss_pred HHHHHh-cCCCEEEEecCCCceEEE-ECCC---CcEeCHHHHHHHHH--HHHHHh
Confidence 999999 899999999999999975 5544 47999999999998 566544
No 13
>PRK14315 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=6.8e-35 Score=288.55 Aligned_cols=210 Identities=21% Similarity=0.218 Sum_probs=164.1
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..|..++.++.+||||||||||++|||||+++++|.+++++.|
T Consensus 60 ~a~~~gL~s~G~~V~~~g~~pTP~~~~a~~~~~~~gGi~ITaSHnP~~~nGiK~~~~~G~~i~~~~~------------- 126 (448)
T PRK14315 60 NALVAGFTSVGMDVLLLGPIPTPAVAMLTRSMRADLGVMISASHNPFEDNGIKLFGPDGFKLSDEIE------------- 126 (448)
T ss_pred HHHHHHHHHCCCeEEEeCCcccHHHHHHHHhcCCCEEEEEEcCCCCcccCCEEEECCCCCcCCHHHH-------------
Confidence 46678899998888777 2345566789999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++.+. +.... .|..... . |. +..+ .+..
T Consensus 127 ---~~ie~~~~-~~~~~-------------~~~~~~~-----------~-g~-~~~~-------------------~~~~ 157 (448)
T PRK14315 127 ---LEIEALLD-GDLDK-------------RLAAPAD-----------I-GR-AKRI-------------------DDAH 157 (448)
T ss_pred ---HHHHHHHh-ccccc-------------ccccccc-----------C-cc-eEEe-------------------cchH
Confidence 46776663 21110 0100000 1 21 1110 3567
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++.. ++.+++||++||+||+++.+++.+|++|| |+++.+|+.+|+.++++.|.+++++.+
T Consensus 158 ~~Y~~~l~~~id~~---------i~~~~lkVvvD~~~G~~~~~~~~ll~~lG-~~v~~i~~~~dg~~~~~~~~~~~l~~l 227 (448)
T PRK14315 158 GRYIEFAKRTLPRD---------LRLDGLRVVVDCANGAAYKVAPEALWELG-AEVITIGVEPNGFNINEECGSTHPEAL 227 (448)
T ss_pred HHHHHHHHHhcccc---------cccCCCEEEEECCCchHHHHHHHHHHHcC-CeEEEeccCCCCCCCCCCCCCCCHHHH
Confidence 88999998887621 22347999999999999999999999999 999999999999988888888999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
++.|++ .+||+|++|||||||+++ +|+. ++++++|++++|++ +||++.+
T Consensus 228 ~~~v~~-~~adlGia~DgDgDR~~i-vd~~---G~~i~~d~~~~l~a--~~ll~~~ 276 (448)
T PRK14315 228 AKKVRE-VRADIGIALDGDADRVII-VDEK---GHVVDGDQLMALIA--ESWAEDG 276 (448)
T ss_pred HHHHHH-cCCCEEEEEcCCCceEEE-EcCC---CcEeCHHHHHHHHH--HHHHHhC
Confidence 999999 999999999999999995 4544 48999999999998 7777643
No 14
>TIGR01455 glmM phosphoglucosamine mutase. This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides.
Probab=100.00 E-value=7.4e-35 Score=287.91 Aligned_cols=217 Identities=23% Similarity=0.285 Sum_probs=168.8
Q ss_pred eeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhh
Q 020474 24 LSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSD 95 (325)
Q Consensus 24 ~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~ 95 (325)
-+..+.-| |..++.|.+.|++|..+ ..|..++.++++||||||||||++|||||+++++|.+++++.+
T Consensus 47 ~R~~s~~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGI~iTaSHnP~~~nGiK~~~~~G~~i~~~~~---- 122 (443)
T TIGR01455 47 TRLSGYMLENALAAGLNSAGVDVLLLGPLPTPAVAYLTRTLRADAGVMISASHNPYEDNGIKFFGPGGFKLDDATE---- 122 (443)
T ss_pred CCcChHHHHHHHHHHHHHCCCeEEEeCCcCcHHHHHHHHhcCCCeEEEEecCCCCcccCcEEEecCCCCcCCHHHH----
Confidence 34444455 57788899999988887 2455667889999999999999999999999999999998544
Q ss_pred hhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHH
Q 020474 96 QLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRA 175 (325)
Q Consensus 96 ~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~ 175 (325)
++|++.+.++. .+. +.... .. | .+...
T Consensus 123 ------------~~I~~~~~~~~-~~~-------------~~~~~-----------~~-g-~~~~~-------------- 149 (443)
T TIGR01455 123 ------------AAIEALLDEAD-PLP-------------RPESE-----------GL-G-RVKRY-------------- 149 (443)
T ss_pred ------------HHHHHHHhcCc-ccc-------------CCCcc-----------Cc-e-EEEEc--------------
Confidence 46666654321 000 00000 01 2 11110
Q ss_pred hccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCC
Q 020474 176 RNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEG 255 (325)
Q Consensus 176 ~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~ 255 (325)
.+..+.|+++|.+.++.. ++.+++||++||+||+++.+++.+|++|| |+++.+|+.+||.+++++
T Consensus 150 -----~~~~~~Y~~~l~~~i~~~---------~~~~~lkVvvD~~~G~~~~~~~~ll~~lg-~~v~~in~~~d~~~~~~~ 214 (443)
T TIGR01455 150 -----PDAVGRYIEFLKSTLPRG---------LTLSGLKVVLDCANGAAYKVAPHVFRELG-AEVIAIGVEPDGLNINDG 214 (443)
T ss_pred -----ccHHHHHHHHHHHHhhcc---------cccCCCEEEEECCCchHHHHHHHHHHHcC-CEEEEEccCCCCCCCCCC
Confidence 356788999998887621 11247999999999999999999999999 999999999999988888
Q ss_pred CCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 256 VGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 256 ~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
|.+++++.+++.|+. .++|+|++|||||||+++ +|+. ++++++|++++|++ +||++.
T Consensus 215 ~~~~~l~~l~~~v~~-~~adlGia~DgD~DR~~~-vd~~---G~~l~~d~~~al~a--~~ll~~ 271 (443)
T TIGR01455 215 CGSTHLDALQKAVRE-HGADLGIAFDGDADRVLA-VDAN---GRIVDGDQILYIIA--RALKES 271 (443)
T ss_pred CCCCCHHHHHHHHhh-cCCCEEEEEcCCCceEEE-ECCC---CcEeCHHHHHHHHH--HHHHHh
Confidence 888999999999999 999999999999999985 4544 48999999999998 777765
No 15
>PRK14320 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=8.3e-35 Score=287.54 Aligned_cols=205 Identities=26% Similarity=0.329 Sum_probs=160.6
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..|.+++.++.+||||||||||++|||||+++++|.+++++.+
T Consensus 59 ~a~~~gL~s~G~~V~d~g~~pTP~~~~av~~~~~~gGI~ITaSHNp~~~nGiK~~~~~G~~i~~~~~------------- 125 (443)
T PRK14320 59 FALVSGLNAAGIDVLDLGVVPTPVVAFMTVKHRAAAGFVITASHNKFTDNGIKLFSSNGFKLDDALE------------- 125 (443)
T ss_pred HHHHHHHHHCCCEEEEecccCchHHHHHHHHcCCceEEEEEeCCCchHHCeEEEECCCCCcCCHHHH-------------
Confidence 46677788888877766 2455667889999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++.+.+. +. +.... .. | .+..+ .+..
T Consensus 126 ---~~Ie~~~~~~---~~-------------~~~~~-----------~~-g-~~~~~-------------------~~~~ 154 (443)
T PRK14320 126 ---EEVEDMIDGD---FI-------------YQPQF-----------KF-G-SYKIL-------------------ANAI 154 (443)
T ss_pred ---HHHHHHHhcc---cc-------------ccccc-----------cC-c-ceEec-------------------cchH
Confidence 4666654321 11 00000 01 2 01110 3467
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++. ... .++||++||+||+++.+++++|++|| |+++.+|++|||.++|++|++++++.+
T Consensus 155 ~~Y~~~l~~~~~~-~~~---------~~~kVvvD~~nG~~~~~~~~ll~~lg-~~v~~i~~~~dg~~~~~~~~~~~l~~l 223 (443)
T PRK14320 155 DEYIESIHSRFAK-FVN---------YKGKVVVDCAHGAASHNFEALLDKFG-INYVSIASNPDGLNINVGCGATCVSNI 223 (443)
T ss_pred HHHHHHHHHHHHh-hcc---------CCCEEEEECCCchHHHHHHHHHHHcC-CcEEEECCcCCCCCCCCCCchHhHHHH
Confidence 8899999887752 111 14799999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhh
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYS 318 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~ 318 (325)
++.|+. .++|+|++|||||||++++ |+. +++++||++++|++ .|+++
T Consensus 224 ~~~v~~-~~adlGia~DgDaDR~~~v-d~~---G~~l~gd~~~al~a--~~l~~ 270 (443)
T PRK14320 224 KKAVKE-QKADLGISLDGDADRIIIV-DEN---GQEIDGDGILNILA--QYSDI 270 (443)
T ss_pred HHHHHH-cCCCEEEEECCCCceEEEE-CCC---CcccCHHHHHHHHH--HHHHH
Confidence 999999 9999999999999999965 443 48999999999998 77754
No 16
>PRK10887 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.3e-34 Score=286.09 Aligned_cols=217 Identities=22% Similarity=0.220 Sum_probs=167.0
Q ss_pred cceeecch----hh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCC
Q 020474 22 VKLSYGTA----GF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQD 89 (325)
Q Consensus 22 ~~~~ygta----gf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~ 89 (325)
+-+.|-|. -| |..+..|.+.|++|..+ ..|..++.++.+||||||||||++|||||+++++|.+++++
T Consensus 42 VvVg~D~R~ss~~l~~a~~~gL~s~Gv~V~~~g~~pTP~~~~a~~~~~~~gGI~ITaShnp~~~ngiK~~~~~G~~i~~~ 121 (443)
T PRK10887 42 VLIGKDTRISGYMLESALEAGLAAAGVDVLLTGPMPTPAVAYLTRTLRAEAGIVISASHNPYYDNGIKFFSADGTKLPDE 121 (443)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHCCCeEEEECCcChHHHHHHHHHcCCCEEEEEecCCCCcccCeEEEECCCCCCCCHH
Confidence 44555443 23 46677788888888777 23455668899999999999999999999999999999875
Q ss_pred ccchhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhH
Q 020474 90 WEPFSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQL 169 (325)
Q Consensus 90 ~e~~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l 169 (325)
++ ++|++.+.+ .+... +.. + . |. +.. +
T Consensus 122 ~~----------------~~ie~~~~~-~~~~~-----------~~~---~------------~-g~-~~~------~-- 148 (443)
T PRK10887 122 VE----------------LAIEAELDK-PLTCV-----------ESA---E------------L-GK-ASR------I-- 148 (443)
T ss_pred HH----------------HHHHHHHhC-cCCcc-----------ccc---c------------C-ce-EEE------c--
Confidence 54 467666532 11100 000 0 1 21 111 1
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCC
Q 020474 170 HWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEG 249 (325)
Q Consensus 170 ~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~ 249 (325)
.+..+.|++++.+.++.. ++++++||++||+||+++.+++.+|++|| |+++.+|+.||+
T Consensus 149 -----------~~~~~~Y~~~l~~~id~~---------i~~~~~kVvvD~~~G~~~~~~~~ll~~lG-~~v~~~n~~~dg 207 (443)
T PRK10887 149 -----------NDAAGRYIEFCKSTFPNE---------LSLRGLKIVVDCANGATYHIAPNVFRELG-AEVIAIGCEPNG 207 (443)
T ss_pred -----------CChHHHHHHHHHHhcCcc---------cccCCCEEEEECCCchHHHHHHHHHHHhC-CeEEEEeccCCC
Confidence 346688999998877521 11247999999999999999999999999 999999999999
Q ss_pred CCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 250 GVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 250 ~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
.+++++|.+++++++++.+++ .++|+|++|||||||++++ |+. ++++++|++++|++ .|+++.
T Consensus 208 ~~~~~~~~~~~l~~l~~~v~~-~~adlGia~D~DgDRl~~v-d~~---G~~i~~d~l~~l~~--~~ll~~ 270 (443)
T PRK10887 208 LNINDECGATDPEALQAAVLA-EKADLGIAFDGDGDRVIMV-DHL---GNLVDGDQLLYIIA--RDRLRR 270 (443)
T ss_pred CCCCCCCCCCCHHHHHHHHHh-cCCCeeeEECCCCceEEEE-CCC---CcEeCHHHHHHHHH--HHHHHh
Confidence 888888888999999999999 9999999999999999855 543 48999999999998 667654
No 17
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
Probab=100.00 E-value=1.3e-34 Score=286.29 Aligned_cols=212 Identities=22% Similarity=0.209 Sum_probs=165.2
Q ss_pred ceeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchh
Q 020474 23 KLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFS 94 (325)
Q Consensus 23 ~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~ 94 (325)
|-++.+.-| |..|+.|.+.|++|..+ .+|.+++.++++||||||||||++|||||++++ |+++.++.+
T Consensus 44 D~R~~s~~~~~a~~~gL~s~G~~V~~~g~~pTP~~~~~v~~~~a~gGI~ITASHNP~~~nGiK~~~~-G~~~~~~~~--- 119 (443)
T cd03089 44 DGRLSSPELAAALIEGLLAAGCDVIDIGLVPTPVLYFATFHLDADGGVMITASHNPPEYNGFKIVIG-GGPLSGEDI--- 119 (443)
T ss_pred CCCCCHHHHHHHHHHHHHHcCCcEEEeCCcchHHHHHHHhccCCCeEEEEecCCCCcccCceEeccC-CCCCCHHHH---
Confidence 344444456 68888999999999888 245666788999999999999999999999999 999987443
Q ss_pred hhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHH
Q 020474 95 DQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVR 174 (325)
Q Consensus 95 ~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~ 174 (325)
++|++.+.++.. . + ..+ . |. +..
T Consensus 120 -------------~~Ie~~~~~~~~--~-------------~-~~~------------~-g~-~~~-------------- 142 (443)
T cd03089 120 -------------QALRERAEKGDF--A-------------A-ATG------------R-GS-VEK-------------- 142 (443)
T ss_pred -------------HHHHHHHHhccc--c-------------c-cCC------------C-Cc-EEE--------------
Confidence 477776654311 0 0 000 1 21 111
Q ss_pred HhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCC-
Q 020474 175 ARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLN- 253 (325)
Q Consensus 175 ~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n- 253 (325)
.+..+.|++.+.+.++.. .+++||++||+||+++.+++++|++|| |+++.+|+.|||.|++
T Consensus 143 ------~d~~~~Y~~~l~~~i~~~-----------~~~lkVvvd~~~G~~~~~~~~ll~~lG-~~v~~i~~~~d~~F~~~ 204 (443)
T cd03089 143 ------VDILPDYIDRLLSDIKLG-----------KRPLKVVVDAGNGAAGPIAPQLLEALG-CEVIPLFCEPDGTFPNH 204 (443)
T ss_pred ------CCCHHHHHHHHHHhcccc-----------cCCCeEEEECCCCchHHHHHHHHHHCC-CEEEEecCCCCCCCCCC
Confidence 346688999998877521 137999999999999999999999999 9999999999987754
Q ss_pred -CCC-CCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 254 -EGV-GADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 254 -~~~-~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
|+| .+++++.+++.+++ .++|+|++|||||||+++++++ +++++||++++|++ +||++..
T Consensus 205 ~p~p~~~~~l~~l~~~v~~-~~adlgia~D~DaDR~~ivd~~----G~~l~~d~~~~lla--~~ll~~~ 266 (443)
T cd03089 205 HPDPTDPENLEDLIAAVKE-NGADLGIAFDGDGDRLGVVDEK----GEIIWGDRLLALFA--RDILKRN 266 (443)
T ss_pred CcCCCCHHHHHHHHHHHHH-cCCCEEEEecCCcceeEEECCC----CcEeCHHHHHHHHH--HHHHHHC
Confidence 444 35788999999999 9999999999999999965443 37999999999999 8887653
No 18
>PRK14314 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=1.9e-34 Score=285.47 Aligned_cols=210 Identities=22% Similarity=0.235 Sum_probs=165.2
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..+..|.+.|++|..+ ..|..++.++.+||||||||||++|||||+++++|.++++++|
T Consensus 60 ~a~~~gL~s~Gv~V~~~g~~ptP~~~~a~~~~~~~gGI~iTaShnp~~~ngiK~~~~~G~~~~~~~~------------- 126 (450)
T PRK14314 60 NALIAGLCSMGVDVLLVGPLPTPGIAFITRSMRADAGVVISASHNPYQDNGIKFFSSDGFKLPDEVE------------- 126 (450)
T ss_pred HHHHHHHHHCCCeEEEecccCCHHHHHHHHhcCCCEEEEEEeCCCCcccccEEEECCCCCCCCHHHH-------------
Confidence 56677888888888777 2345567889999999999999999999999999999998655
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++.+.++.+.. .|.... .. | ++... .+..
T Consensus 127 ---~~Ie~~~~~~~~~~-------------~~~~~~-----------~~-g-~~~~~-------------------~~~~ 158 (450)
T PRK14314 127 ---LRIEAMVLSKDFDW-------------LLPDAH-----------AV-G-KAKRI-------------------DDAP 158 (450)
T ss_pred ---HHHHHHHhcCCccc-------------cccchh-----------cC-c-eEEEe-------------------CchH
Confidence 46776665432110 011000 01 2 11110 3567
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|+++|.+.++.. ++.+++||++||+||+++.+++.+|++|| |+++.+|+++||.++++.|++++++.+
T Consensus 159 ~~Y~~~l~~~id~~---------i~~~~~kVvvD~~~Ga~~~~~~~il~~lg-~~v~~~~~~~dg~~~~~~~~~~~~~~l 228 (450)
T PRK14314 159 GRYIVFLKATFPKG---------LTLKGLKIVLDCANGAAYKVAPAVFEELG-AEVICIGVEPNGLNINAGCGSLHPEVI 228 (450)
T ss_pred HHHHHHHHHhhccc---------cCCCCCEEEEECCCchHHHHHHHHHHHcC-CeEEEeccCCCCCCCCCCCCCCCHHHH
Confidence 88999998887621 11247999999999999999999999999 999999999999998888999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.|++ .++|+|++|||||||++++ |+. ++++++|++.+|++ +|+++.
T Consensus 229 ~~~v~~-~~adlGia~DgDgDR~~~v-d~~---G~~i~~d~~~al~~--~~ll~~ 276 (450)
T PRK14314 229 AKAVIE-HGADLGIALDGDADRLIVV-DEK---GHIVDGDQIMAICA--TDLKKR 276 (450)
T ss_pred HHHHHh-cCCCeEEEEcCCCceEEEE-CCC---CcCcCHHHHHHHHH--HHHHHh
Confidence 999999 9999999999999999955 543 48999999999998 777765
No 19
>PRK14323 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=2.2e-34 Score=284.29 Aligned_cols=200 Identities=24% Similarity=0.257 Sum_probs=156.8
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..|.+++.++.+||||||||||++|||||+++++|.+++++.|
T Consensus 60 ~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~------------- 126 (440)
T PRK14323 60 AALAAGLTSRGVRVEHLGVLPTPGVSYLTRHLGATAGVVISASHNPYQDNGIKFFGADGEKLPDAAE------------- 126 (440)
T ss_pred HHHHHHHHHCCCEEEEecccChHHHHHHHHHhCCCEEEEEecCCCCCccCCEEEeCCCCCcCCHHHH-------------
Confidence 46677888888888766 2455667889999999999999999999999999999987544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++++.+.. ++. +..... . | .+.. . .+..
T Consensus 127 ---~~ie~~~~~~~-~~~-------------~~~~~~-----------~-g-~~~~------~-------------~~~~ 157 (440)
T PRK14323 127 ---LEIEALLDEVP-ELA-------------EVTGAG-----------I-G-SVSD------F-------------TEAE 157 (440)
T ss_pred ---HHHHHHHhccc-ccC-------------cccccC-----------c-e-eEEE------h-------------hhHH
Confidence 46766654310 111 000000 1 2 1111 0 2456
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++. .+++||++||+||+++.+++++|++|| |+++.+|++||+.++|+.|++++++.+
T Consensus 158 ~~Y~~~l~~~~~~------------~~~~kVvvD~~~G~~~~~~~~ll~~lG-~~v~~l~~~~dg~~~~~~~~~~~l~~l 224 (440)
T PRK14323 158 RLYLDFLLSHAPD------------LSGLKVALDCANGAAYRLAPKVFQAAG-ADVFALFNTPDGRNINRGCGSTHPEAL 224 (440)
T ss_pred HHHHHHHHHhccc------------ccCCEEEEECCCchHHHHHHHHHHHcC-CcEEEEeccCCCCcCCCCCCCCCHHHH
Confidence 7899988776531 126999999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHH
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMA 311 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~ 311 (325)
++.|++ .++|+|++|||||||++++ |+. ++++++|++.+|++
T Consensus 225 ~~~v~~-~~adlGia~DgD~DR~~~v-D~~---G~~i~~d~~~~l~a 266 (440)
T PRK14323 225 QRFVVE-GGLDLGVAFDGDADRALFV-DRR---GRLFHGDHMLYLNA 266 (440)
T ss_pred HHHHhc-cCCCEEEEeCCCcceeEEE-CCC---CcEeCHHHHHHHHH
Confidence 999999 9999999999999999965 443 48999999999998
No 20
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.
Probab=100.00 E-value=2e-34 Score=286.13 Aligned_cols=218 Identities=21% Similarity=0.215 Sum_probs=167.3
Q ss_pred cceeecchhh-hhhccccccceeeeeeeh--------hhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccc
Q 020474 22 VKLSYGTAGF-RADASILQSTVYRVGILA--------ALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEP 92 (325)
Q Consensus 22 ~~~~ygtagf-r~~a~~L~~~~~~vgi~~--------~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~ 92 (325)
.|.++.+.-| |..+..|.+.|++|..+. .+..++.++.+||||||||||++|||||+++++|.+++++.+
T Consensus 46 ~D~R~ss~~l~~a~~~gL~s~G~~V~~~~g~~pTP~~~~a~~~~~~~gGI~ITaSHnp~~~ngiK~~~~~G~~i~~~~~- 124 (461)
T cd05800 46 YDTRFLSEEFARAVAEVLAANGIDVYLSDRPVPTPAVSWAVKKLGAAGGVMITASHNPPEYNGVKVKPAFGGSALPEIT- 124 (461)
T ss_pred eCCCcCcHHHHHHHHHHHHHCCCEEEEcCCCCCchHHHHHHHHhCCCeeEEEccCCCCcccCeEEEeCCCCCcCChHHH-
Confidence 3444444455 678888999999998762 345567889999999999999999999999999999988554
Q ss_pred hhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHH
Q 020474 93 FSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWM 172 (325)
Q Consensus 93 ~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~ 172 (325)
++|++.+..+.. . +.... .. | .+. +
T Consensus 125 ---------------~~ie~~~~~~~~--~-------------~~~~~-----------~~-g-------~i~-~----- 149 (461)
T cd05800 125 ---------------AAIEARLASGEP--P-------------GLEAR-----------AE-G-------LIE-T----- 149 (461)
T ss_pred ---------------HHHHHHHhhccc--c-------------ccccc-----------cC-C-------cee-e-----
Confidence 467776654311 0 00000 01 2 111 1
Q ss_pred HHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCC
Q 020474 173 VRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVL 252 (325)
Q Consensus 173 v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~ 252 (325)
.+..+.|++++.+.++.. .++++++|||+||+||+++.+++++|++|| |+++.+|+.|||.|+
T Consensus 150 --------~~~~~~Y~~~l~~~~~~~--------~i~~~~~kivvd~~~G~~~~~~~~il~~lg-~~v~~~~~~~dg~F~ 212 (461)
T cd05800 150 --------IDPKPDYLEALRSLVDLE--------AIREAGLKVVVDPMYGAGAGYLEELLRGAG-VDVEEIRAERDPLFG 212 (461)
T ss_pred --------cCCHHHHHHHHHHHhChh--------hhhcCCceEEEeCCCCCcHHHHHHHHHHcC-CCEEEeeCCcCCCCC
Confidence 456788999998887531 112247999999999999999999999999 999999999998875
Q ss_pred C--CCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 253 N--EGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 253 n--~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
+ |+|.+++++.+++.+++ .+||+|++|||||||++++++. ++++++||+++|++ +||++.
T Consensus 213 ~~~p~p~~~~l~~l~~~v~~-~~ad~Gia~D~DgDR~~vvd~~----G~~l~~d~~~al~a--~~ll~~ 274 (461)
T cd05800 213 GIPPEPIEKNLGELAEAVKE-GGADLGLATDGDADRIGAVDEK----GNFLDPNQILALLL--DYLLEN 274 (461)
T ss_pred CCCCCCCHHHHHHHHHHHHh-cCCCEEEEECCCCCeEEEEeCC----CceeCHHHHHHHHH--HHHHHc
Confidence 4 44556788899999998 8999999999999999965544 37999999999999 778765
No 21
>cd03084 phosphohexomutase The alpha-D-phosphohexomutase superfamily includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this family include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). These enzymes play important and diverse roles in carbohydrate metabolism in organisms from bacteria to humans. Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1.1e-34 Score=279.11 Aligned_cols=208 Identities=27% Similarity=0.385 Sum_probs=160.1
Q ss_pred ecchhhhhhccc--cccceeeeeeehhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCc
Q 020474 26 YGTAGFRADASI--LQSTVYRVGILAALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDP 103 (325)
Q Consensus 26 ygtagfr~~a~~--L~~~~~~vgi~~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~ 103 (325)
|||+|+|-.+.+ -+..+.+.|...+.. +||||||||||++||||||++++|.+++++++
T Consensus 2 fg~~gi~G~~n~~itpe~~~~lg~a~g~~-------gGI~ITaSHnp~~~nGiK~~~~~G~~i~~~~~------------ 62 (355)
T cd03084 2 FGTSGVRGVVGDDITPETAVALGQAIGST-------GGIMITASHNPPEDNGIKFVDPDGEPIASEEE------------ 62 (355)
T ss_pred CcccCcccccCCcCCHHHHHHHHHHHhcc-------eeEEEEeCCCChhHCcEEEecCCCCcCCHHHH------------
Confidence 799999976665 666666666554332 89999999999999999999999999998666
Q ss_pred hhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCC
Q 020474 104 QSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKAT 183 (325)
Q Consensus 104 ~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~ 183 (325)
++||+.+..+... |..... . |..+.. .+.
T Consensus 63 ----~~Ie~~~~~~~~~---------------~~~~~~-----------~-~~~~~~--------------------~~~ 91 (355)
T cd03084 63 ----KAIEDLAEKEDEP---------------SAVAYE-----------L-GGSVKA--------------------VDI 91 (355)
T ss_pred ----HHHHHHHhccccc---------------cccccc-----------C-CCeEEE--------------------cCC
Confidence 4677666433110 000000 1 111111 456
Q ss_pred hHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCC--CCCCCC-Ccc
Q 020474 184 ESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGV--LNEGVG-ADF 260 (325)
Q Consensus 184 ~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~--~n~~~~-~~~ 260 (325)
.+.|++++.+.++.. .++++++||++||+||+++.+++++|++|| |+++.+|+.+|+.| .+|+|. +++
T Consensus 92 ~~~Y~~~l~~~i~~~--------~i~~~~~kvvvD~~~G~~~~~~~~ll~~lg-~~v~~~n~~~d~~F~~~~p~p~~~~~ 162 (355)
T cd03084 92 LQRYFEALKKLFDVA--------ALSNKKFKVVVDSVNGVGGPIAPQLLEKLG-AEVIPLNCEPDGNFGNINPDPGSETN 162 (355)
T ss_pred HHHHHHHHHHhcChh--------hhccCCCEEEEECCCchHHHHHHHHHHHcC-CcEEEEcCcCCCCCCCCCCCCCchhh
Confidence 788999998887631 122347999999999999999999999999 99999999999875 456666 788
Q ss_pred hhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 261 VQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 261 l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.+.+.+++ .++|+|++|||||||+++++++ |+++++|++++|++ .||++.
T Consensus 163 l~~l~~~v~~-~~adlG~a~DgDgDRl~~vd~~----G~~l~~d~~~al~~--~~l~~~ 214 (355)
T cd03084 163 LKQLLAVVKA-EKADFGVAFDGDADRLIVVDEN----GGFLDGDELLALLA--VELFLT 214 (355)
T ss_pred HHHHHHHHHh-cCCCEEEEEcCCCceeEEECCC----CceeCHhHHHHHHH--HHHHHh
Confidence 9999999999 9999999999999999855443 58999999999998 777754
No 22
>PRK14321 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=3.6e-34 Score=283.43 Aligned_cols=207 Identities=20% Similarity=0.201 Sum_probs=163.1
Q ss_pred hhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcC
Q 020474 29 AGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANA 100 (325)
Q Consensus 29 agf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~ 100 (325)
--| |..++.|.+.|++|..+ ..+.+++.++.+||||||||||++|||||+++.+|.++++++|
T Consensus 50 ~~l~~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~~~gGI~ITaSHnP~~~nGiK~~~~~G~~i~~~~~--------- 120 (449)
T PRK14321 50 EMLKNALISGLLSTGVDVIDIGLAPTPLTGFAIKLYNADAGVTITASHNPPEYNGIKVWQRNGMAYTPEME--------- 120 (449)
T ss_pred HHHHHHHHHHHHHCCCeEEEeCCcCCcHHHHHHHhcCCCeEEEEEeCCCCHHHCcEEEECCCCCcCCHHHH---------
Confidence 344 57788899999888877 2455667889999999999999999999999999999988554
Q ss_pred CCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCC
Q 020474 101 PDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGL 180 (325)
Q Consensus 101 ~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g 180 (325)
++|++++..+.+. +.... .. | .+. +
T Consensus 121 -------~~ie~~~~~~~~~---------------~~~~~-----------~~-g-------~~~-~------------- 145 (449)
T PRK14321 121 -------NELERIIESGNFK---------------RVPWN-----------EI-G-------TLR-R------------- 145 (449)
T ss_pred -------HHHHHHHhccccc---------------ccccc-----------cC-c-------eee-e-------------
Confidence 4777766443211 10000 01 2 111 1
Q ss_pred CCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCC-CCCCCCc
Q 020474 181 KATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVL-NEGVGAD 259 (325)
Q Consensus 181 ~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~-n~~~~~~ 259 (325)
.+..+.|+++|.+.++. .+++||++||+||+++.+++++|++|| |+++.+|+.||+.++ +|+|.++
T Consensus 146 ~~~~~~Y~~~l~~~~~~------------~~~~kVvvD~~~G~~~~~~~~il~~lg-~~v~~i~~~~d~~f~~~p~p~~~ 212 (449)
T PRK14321 146 ADPKEEYIKAALEMIKL------------ENSYTVVVDSGNGAGSILSPYLQRELG-NKVISLNSHPSGFFVRELEPNAK 212 (449)
T ss_pred cccHHHHHHHHHHhcCc------------CCCCEEEEECCCchHHHHHHHHHHHcC-CEEEEeCccCCCCCCCCCCCchh
Confidence 35678899999888752 127999999999999999999999999 999999999998764 4667789
Q ss_pred chhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 260 FVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 260 ~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
+++.+++.++. .++|+|++|||||||++++++. +.++++|++++|++ +|+++.
T Consensus 213 ~l~~l~~~v~~-~~adlGia~DgD~DR~~vvd~~----G~~~~~d~~~~l~a--~~ll~~ 265 (449)
T PRK14321 213 SLSMLAKTVKV-LKADVGIAHDGDADRIGVVDDQ----GNFVEYEVMLSLIA--GYMLRK 265 (449)
T ss_pred hHHHHHHHHHH-CCCCEEEEecCCCceEEEECCC----CCEeChHHHHHHHH--HHHHHh
Confidence 99999999999 9999999999999999966444 36899999999999 777764
No 23
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=1.9e-33 Score=277.99 Aligned_cols=211 Identities=18% Similarity=0.183 Sum_probs=161.1
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..+..++.++++||||||||||++|||||+++++|.+++++++
T Consensus 55 ~a~~~gL~~~G~~V~~~g~~pTP~~~~a~~~~~~~~GI~ITaShnp~~~nGiK~~~~~G~~~~~~~~------------- 121 (445)
T cd05803 55 KIVIGALLACGCDVIDLGIAPTPTVQVLVRQSQASGGIIITASHNPPQWNGLKFIGPDGEFLTPDEG------------- 121 (445)
T ss_pred HHHHHHHHHCCCeEEEeCCCCchHHHHHHHHhCCCeeEEEEecCCCcccccEEEECCCCCcCCHHHH-------------
Confidence 57788899999888887 2455667889999999999999999999999999999998655
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++.+.++.. . |.+.. .. |. +.. + .+..
T Consensus 122 ---~~i~~~~~~~~~--~-------------~~~~~-----------~~-g~-~~~------~-------------~~~~ 151 (445)
T cd05803 122 ---EEVLSCAEAGSA--Q-------------KAGYD-----------QL-GE-VTF------S-------------EDAI 151 (445)
T ss_pred ---HHHHHHHhcccc--c-------------ccccc-----------cC-cc-eec------c-------------CchH
Confidence 366655433211 0 10000 01 21 111 1 3566
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCC-CCCCCCCcchhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGV-LNEGVGADFVQK 263 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~-~n~~~~~~~l~~ 263 (325)
+.|++++.+.++.... .++++++||++||+||+++.+++++|++|| |+++.+|+.+||.| .+|+|.+++++.
T Consensus 152 ~~Y~~~l~~~~~~~~~------~~~~~~lkVvvd~~~G~~~~~~~~ll~~lg-~~v~~~~~~~d~~F~~~p~p~~~~l~~ 224 (445)
T cd05803 152 AEHIDKVLALVDVDVI------KIRERNFKVAVDSVNGAGGLLIPRLLEKLG-CEVIVLNCEPTGLFPHTPEPLPENLTQ 224 (445)
T ss_pred HHHHHHHHhhcccchh------hhccCCCEEEEECCCCcHHHHHHHHHHHcC-CEEEEeCCcCCCCCCCCCCCChHHHHH
Confidence 8899999887652100 011247999999999999999999999999 99999999999876 455666788999
Q ss_pred hhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 264 EKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 264 l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
+.+.+++ .++|+|++|||||||++++++.| .++++|++++|++ +||++.
T Consensus 225 l~~~v~~-~~adlgi~~D~DgDR~~ivd~~G----~~i~~d~~~al~a--~~ll~~ 273 (445)
T cd05803 225 LCAAVKE-SGADVGFAVDPDADRLALVDEDG----RPIGEEYTLALAV--DYVLKY 273 (445)
T ss_pred HHHHHHh-cCCCEEEeeCCCCceEEEECCCC----CCcChHHHHHHHH--HHHHHh
Confidence 9999999 99999999999999999654443 6889999999998 777763
No 24
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=2.1e-33 Score=277.23 Aligned_cols=216 Identities=22% Similarity=0.234 Sum_probs=165.3
Q ss_pred cceeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccch
Q 020474 22 VKLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPF 93 (325)
Q Consensus 22 ~~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~ 93 (325)
.|-++-+.-| |..++.|.+.|++|..+ ..+..++.+ .+||||||||||++|||||+++++|.+++++++
T Consensus 40 ~D~R~~s~~l~~a~~~gL~~~G~~V~~~g~~~tP~~~~~v~~~~-~gGi~ItaShnp~~~ngiK~~~~~G~~i~~~~~-- 116 (439)
T cd03087 40 RDTRTSGPMLKNAVIAGLLSAGCDVIDIGIVPTPALQYAVRKLG-DAGVMITASHNPPEYNGIKLVNPDGTEFSREQE-- 116 (439)
T ss_pred eCCCCCHHHHHHHHHHHHHHCCCeEEEcCccChHHHHHHHHhcC-CceEEEEeCCCCHHHCcEEEECCCCCcCCHHHH--
Confidence 3444444455 57788899999999888 234556677 999999999999999999999999999998655
Q ss_pred hhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHH
Q 020474 94 SDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMV 173 (325)
Q Consensus 94 ~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v 173 (325)
++|++.+.++.+. +.+.. .. | .+..+
T Consensus 117 --------------~~Ie~~~~~~~~~---------------~~~~~-----------~~-g-------~~~~~------ 142 (439)
T cd03087 117 --------------EEIEEIIFSERFR---------------RVAWD-----------EV-G-------SVRRE------ 142 (439)
T ss_pred --------------HHHHHHHhcCCcc---------------ccccc-----------cC-e-------eEEec------
Confidence 4777776543211 00000 01 2 11111
Q ss_pred HHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCC-
Q 020474 174 RARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVL- 252 (325)
Q Consensus 174 ~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~- 252 (325)
.+..+.|++++.+.++.. . .+++||++||+||+++.+++++|++|| |+++.+|+.||+.|+
T Consensus 143 -------~~~~~~Y~~~l~~~~~~~--------~--~~~lkIvid~~~G~~~~~~~~~l~~lg-~~v~~~~~~~d~~f~~ 204 (439)
T cd03087 143 -------DSAIDEYIEAILDKVDID--------G--GKGLKVVVDCGNGAGSLTTPYLLRELG-CKVITLNANPDGFFPG 204 (439)
T ss_pred -------CccHHHHHHHHHHhcCcc--------c--CCCCEEEEECCCCchHHHHHHHHHHcC-CEEEEECCcCCCCCCC
Confidence 347788999998876521 0 137999999999999999999999999 999999999998764
Q ss_pred -CCCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 253 -NEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 253 -n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
+|+|.+++++.+++.++. .++|+|++|||||||+++++++ +.++++|++++|++ +||++.
T Consensus 205 ~~p~p~~~~l~~l~~~v~~-~~adlgia~D~DgDR~~~vd~~----G~~l~~d~~~~l~a--~~ll~~ 265 (439)
T cd03087 205 RPPEPTPENLSELMELVRA-TGADLGIAHDGDADRAVFVDEK----GRFIDGDKLLALLA--KYLLEE 265 (439)
T ss_pred CCCCCCHHHHHHHHHHHHh-cCCCEEEEEcCCCceEEEECCC----CCEechHHHHHHHH--HHHHhc
Confidence 455667889999999988 8999999999999999955443 36899999999999 778764
No 25
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=100.00 E-value=3.7e-33 Score=280.73 Aligned_cols=223 Identities=17% Similarity=0.103 Sum_probs=154.4
Q ss_pred ceeecchhh-hhhccccccceeeeeee----------hhhhhcccCCc------eEEEEccCCCCCCCCceEEECCCCCc
Q 020474 23 KLSYGTAGF-RADASILQSTVYRVGIL----------AALRSLKTQCV------IGLMITASHNKVTDNGVKIADPSGGM 85 (325)
Q Consensus 23 ~~~ygtagf-r~~a~~L~~~~~~vgi~----------~~~~~~~~~~~------~GVmITASHNP~~~NGiKi~~~~G~~ 85 (325)
|-++.++=| +..+..|.+.|++|.++ .+|.+++.++. +||||||||||++|||||+++++|.+
T Consensus 67 D~R~~S~~~~~~~~~gL~s~Gi~V~~~~~~g~~pTP~~~~av~~~~~~~~~~~~gGI~ITASHNP~~~NGiK~~~~~G~~ 146 (522)
T cd05801 67 DTHALSEPAFISALEVLAANGVEVIIQQNDGYTPTPVISHAILTYNRGRTEGLADGIVITPSHNPPEDGGFKYNPPHGGP 146 (522)
T ss_pred CCCcCCHHHHHHHHHHHHHCCCEEEEeCCCCCCCchHHHHHHHHhccccccCCCcEEEEECCCCCcccCEEEEECCCCCC
Confidence 344434444 67778999999999963 23455566665 59999999999999999999999999
Q ss_pred CCCCccchhhhhhcCCCchhHHHHHHHHHHhcC-CCCCCCCCceEEeccCCCC-ChHHHHHHHHHHHHhhcCCceeecce
Q 020474 86 LSQDWEPFSDQLANAPDPQSLVSLIEEFVKKEK-IPFNGKHPAEILLGRDTRP-SGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 86 l~~~~e~~~~~i~n~~~~~~~~~~ie~~~~~~~-~~~~~~~~~~V~vg~D~r~-ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
++++.+ ++||+.+.... -.+. |.+. ... ..+ .. |. +..
T Consensus 147 ~~~~~~----------------~~Ie~~~~~~~~~~~~-----------~~~~~~~~---~~~-----~~-~~-~~~--- 186 (522)
T cd05801 147 ADTDIT----------------RWIEKRANALLANGLK-----------GVKRIPLE---AAL-----AS-GY-THR--- 186 (522)
T ss_pred CCHHHH----------------HHHHHhhhhhhhcccc-----------cccccchh---hhh-----cc-Cc-eec---
Confidence 887444 45555432100 0000 0010 000 000 00 11 111
Q ss_pred ecchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEE
Q 020474 164 LTTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVR 243 (325)
Q Consensus 164 ~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~i 243 (325)
.+..+.|++++.+.++.. .++++++||++||+||+++.+++++|++|| |+++.+
T Consensus 187 -----------------~~~~~~Y~~~l~~~v~~~--------~~~~~~lkVvvd~~~G~~~~~~~~ll~~lG-~~v~~l 240 (522)
T cd05801 187 -----------------HDFVTPYVADLGNVIDMD--------AIRKSGLRLGVDPLGGASVPYWQPIAEKYG-LNLTVV 240 (522)
T ss_pred -----------------CCcHHHHHHHHHHhhChh--------hhhcCCceEEEeCCCCccHHHHHHHHHHcC-CCEEEE
Confidence 356788999998887531 112237999999999999999999999999 899999
Q ss_pred cCCCCCCCCCCC----------C-CCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHH
Q 020474 244 NSGKEGGVLNEG----------V-GADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMAT 312 (325)
Q Consensus 244 n~~~d~~~~n~~----------~-~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~ 312 (325)
|+.+|+.++.+. | .+++++.+.+. . .++|+|++|||||||+++++++ |++++|||+++|++
T Consensus 241 ~~~~d~~f~~~~p~~~~~~~~~p~~~~~l~~l~~~--~-~~adlGia~DgDaDRl~vvd~~----G~~l~gd~~~aLla- 312 (522)
T cd05801 241 NPKVDPTFRFMTLDHDGKIRMDCSSPYAMAGLLKL--K-DKFDLAFANDPDADRHGIVTPS----AGLMNPNHYLSVAI- 312 (522)
T ss_pred cCeeCCCCCCCCCCcccCCCCCCCCHHHHHHHHHh--h-cCCCEEEEECCCccceeEEecC----CeEECHHHHHHHHH-
Confidence 999997654322 2 23455555554 2 4899999999999999955554 68999999999998
Q ss_pred HHHhhhcc
Q 020474 313 RYYLYSLY 320 (325)
Q Consensus 313 ~~~~~~~~ 320 (325)
+||++..
T Consensus 313 -~~ll~~~ 319 (522)
T cd05801 313 -DYLFTHR 319 (522)
T ss_pred -HHHHHhC
Confidence 7887653
No 26
>PRK15414 phosphomannomutase CpsG; Provisional
Probab=100.00 E-value=8.2e-33 Score=274.16 Aligned_cols=213 Identities=17% Similarity=0.191 Sum_probs=157.6
Q ss_pred cchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhh
Q 020474 27 GTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLA 98 (325)
Q Consensus 27 gtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~ 98 (325)
-+.-| +..|+.|.+.|++|..+ .+|.+++.++.+||||||||||++|||+|+++++|..++++.+
T Consensus 50 ss~~l~~a~a~gL~s~Gi~V~~~g~~pTP~~~~av~~~~~~gGI~ITaSHNP~~~NG~Ki~~~~g~~~~~~~~------- 122 (456)
T PRK15414 50 TSETLKLALAKGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPMDYNGMKLVREGARPISGDTG------- 122 (456)
T ss_pred ChHHHHHHHHHHHHHCCCeEEEeCCcChHHHHHhhhccCCCeEEEEecCCCCCCCCCEEeecCCCcccCcHHH-------
Confidence 33345 57788899999999887 2455667889999999999999999999999998887776321
Q ss_pred cCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhcc
Q 020474 99 NAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNK 178 (325)
Q Consensus 99 n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~ 178 (325)
+++|++++..+.+ . ++ +... . |. +..
T Consensus 123 --------~~~i~~~~~~~~~--~-----~~----~~~~---------------~-g~-~~~------------------ 148 (456)
T PRK15414 123 --------LRDVQRLAEANDF--P-----PV----DETK---------------R-GR-YQQ------------------ 148 (456)
T ss_pred --------HHHHHHHHhcCCc--c-----cc----cccC---------------C-Cc-EEe------------------
Confidence 1345555443211 1 00 0000 1 21 111
Q ss_pred CCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHH---HHHcCCc--cEEEEcCCCCCCCCC
Q 020474 179 GLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVI---KEKLNEL--DIEVRNSGKEGGVLN 253 (325)
Q Consensus 179 ~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~l---l~~Lg~~--~v~~in~~~d~~~~n 253 (325)
.+..+.|++++.+.++. . .+ +++||++||+||+++.+++.+ |++|| | +++.+|++|||.|++
T Consensus 149 --~~~~~~Yi~~l~~~id~--~------~~--~~lkVvvD~~~G~~~~~~~~l~~~l~~lG-~~v~v~~~~~~pdg~F~~ 215 (456)
T PRK15414 149 --INLRDAYVDHLFGYINV--K------NL--TPLKLVINSGNGAAGPVVDAIEARFKALG-APVELIKVHNTPDGNFPN 215 (456)
T ss_pred --cCcHHHHHHHHHHhccc--c------cC--CCCEEEEECCCCcchhhHHHHHHHHHhcC-CCeEEEEeecCCCCCCCC
Confidence 24668899999887752 1 11 379999999999999999999 89999 7 666789999987754
Q ss_pred CCCC---CcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 254 EGVG---ADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 254 ~~~~---~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
+.|. +++++.+++.+++ .++|+|++|||||||+++++++| .+++||++++|++ .||++..
T Consensus 216 ~~p~P~~~~~l~~l~~~v~~-~~adlGia~DgDaDR~~~vde~G----~~l~~d~~~~l~a--~~ll~~~ 278 (456)
T PRK15414 216 GIPNPLLPECRDDTRNAVIK-HGADMGIAFDGDFDRCFLFDEKG----QFIEGYYIVGLLA--EAFLEKN 278 (456)
T ss_pred CCCCCCCHHHHHHHHHHHHH-cCCCEEEEECCCcceEEEECCCC----CEecHHHHHHHHH--HHHHHhC
Confidence 4333 4578889999998 99999999999999999554443 6799999999998 7777653
No 27
>PLN02371 phosphoglucosamine mutase family protein
Probab=100.00 E-value=1e-32 Score=280.31 Aligned_cols=229 Identities=21% Similarity=0.139 Sum_probs=161.2
Q ss_pred ceeecchhh-hhhccccccceeeeeee-------hhhhhcc--cCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccc
Q 020474 23 KLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLK--TQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEP 92 (325)
Q Consensus 23 ~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~--~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~ 92 (325)
|-+.-+.-| +..++.|.+.|++|..+ .+|.++. .++++||||||||||++|||||+++++|+++.++.+
T Consensus 123 D~R~sS~~l~~a~a~gL~s~Gi~V~~~g~~pTP~~~~av~~~~~~~~gGImITASHNP~~~NGiK~~~~~G~~~~~~~~- 201 (583)
T PLN02371 123 DPRISGPRLADAVFAGLASAGLDVVDMGLATTPAMFMSTLTEREDYDAPIMITASHLPYNRNGLKFFTKDGGLGKPDIK- 201 (583)
T ss_pred CCCCChHHHHHHHHHHHHHCCCEEEEecccCchHHHHHHHhccCCCceEEEEeCCCCCCCCCCEEEeCCCCCCCchHHH-
Confidence 344444455 57788899999998877 1344443 378999999999999999999999999999988554
Q ss_pred hhhhhhcCCCchhHHHHHHHHHHh-cCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHH
Q 020474 93 FSDQLANAPDPQSLVSLIEEFVKK-EKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHW 171 (325)
Q Consensus 93 ~~~~i~n~~~~~~~~~~ie~~~~~-~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f 171 (325)
++|+..+.. .++... +..... .... |. +..
T Consensus 202 ---------------~~ie~~~~~~~e~~~~-------------~~~~~~--------~~~~-g~-i~~----------- 232 (583)
T PLN02371 202 ---------------DILERAARIYKEWSDE-------------GLLKSS--------SGAS-SV-VCR----------- 232 (583)
T ss_pred ---------------HHHHHHHhhccccccc-------------ccchhh--------hccC-Cc-EEE-----------
Confidence 355554432 111000 000000 0001 21 111
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHHhh-hccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEE-EEcCCCCC
Q 020474 172 MVRARNKGLKATESDYFEQLLSSFRCL-MNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIE-VRNSGKEG 249 (325)
Q Consensus 172 ~v~~~n~~g~~~~~~Y~~~l~~~~~~~-~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~-~in~~~d~ 249 (325)
.+..+.|+++|.+.++.. +.... ...+.+++|||+||+||+++.+++++|++|| |+++ .++++|||
T Consensus 233 ---------~d~~~~Y~~~l~~~i~~~~~~~~~--~~~~~~~lkIvvD~~nGag~~~~~~lL~~LG-~~v~~~~~~~pDg 300 (583)
T PLN02371 233 ---------VDFMSTYAKHLRDAIKEGVGHPTN--YETPLEGFKIVVDAGNGAGGFFAEKVLEPLG-ADTSGSLFLEPDG 300 (583)
T ss_pred ---------echHHHHHHHHHHHHHHhhccccc--cccCCCCCEEEEeCCCCchHHHHHHHHHHcC-CCeEeeccCCCCC
Confidence 245688999998887631 10000 0011247999999999999999999999999 8988 88999998
Q ss_pred CCCCCCCC---CcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 250 GVLNEGVG---ADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 250 ~~~n~~~~---~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
.|+++.|. +++++.+++.+++ .++|+|++|||||||++++ |+. +++++|||+++||+ +||++..
T Consensus 301 ~Fp~~~P~P~~~~~l~~l~~~v~~-~~aDlGia~DgDaDR~~vv-D~~---G~~i~gd~l~aLla--~~ll~~~ 367 (583)
T PLN02371 301 MFPNHIPNPEDKAAMSATTQAVLA-NKADLGIIFDTDVDRSAVV-DSS---GREINRNRLIALMS--AIVLEEH 367 (583)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHh-cCCCEEEEECCCccceeEE-CCC---CEEECHHHHHHHHH--HHHHHhC
Confidence 87554333 4568889999999 9999999999999999965 443 48999999999998 7777653
No 28
>PRK14322 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=7.6e-33 Score=272.53 Aligned_cols=201 Identities=25% Similarity=0.287 Sum_probs=154.8
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..|.+++.+ .+||||||||||++|||||++ ++|.+++++.|
T Consensus 55 ~a~~~gL~s~G~~V~~~g~~pTP~~~~av~~~~-~gGI~ITaSHnP~~~nGiK~~-~~G~~i~~~~~------------- 119 (429)
T PRK14322 55 AAISAGLTSMGVDVLLCGILPTPAVALLTRITR-SFGVVISASHNPPEYNGIKVL-KGGYKIPDEME------------- 119 (429)
T ss_pred HHHHHHHHHCCCeEEEecCcCHHHHHHHHhccC-CceEEEECCCCChHhCCEEEe-cCCCcCCHHHH-------------
Confidence 46677788888777766 234455554 899999999999999999999 99999887544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++|++.+..+.+ . +.. . . | .+... .+..
T Consensus 120 ---~~ie~~~~~~~~--~-------------~~~-~------------~-g-~~~~~-------------------~~~~ 147 (429)
T PRK14322 120 ---VEIEERIESGYF--P-------------VRS-V------------V-G-RTKSF-------------------REGR 147 (429)
T ss_pred ---HHHHHHHhcCCC--c-------------ccc-C------------c-e-eEEec-------------------cchH
Confidence 467666644321 1 000 0 1 2 11110 3456
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++. ++ .+++|||+||+||+++.+++++|++|| |+++.+|+++|+.++|++|++++++.+
T Consensus 148 ~~Y~~~l~~~v~~-~~---------~~~~kVvvD~~nG~~~~~~~~ll~~lg-~~v~~ln~~~dg~~~~~~~~~~~l~~l 216 (429)
T PRK14322 148 DMYIGAVLEMFRD-LD---------LTGEMVSLDLANGATTTTAKEVFEFLG-AKVEVFNDSQDGLLINQGCGATHPRFL 216 (429)
T ss_pred HHHHHHHHHhhcc-cc---------cCCCEEEEECCCChHHHHHHHHHHHcC-CEEEEECCcCCCCCCCCCCCcCCHHHH
Confidence 7899999887752 11 136899999999999999999999999 999999999999999888989999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.+++ +|+|++|||||||+++ +|+. |.+++||++++|++ .|+++.
T Consensus 217 ~~~v~~---~dlGia~DgD~DR~~~-vd~~---G~~i~~d~~~~l~a--~~l~~~ 262 (429)
T PRK14322 217 AEEMKN---GKVGFTFDGDGDRVIA-VDEE---RNVVNGDRIIGILA--VGLKEE 262 (429)
T ss_pred HHHHHh---cCEEEEEcCCCceEEE-ECCC---CcEEChHHHHHHHH--HHHHHh
Confidence 988754 5999999999999985 5543 58999999999998 677664
No 29
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific. This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P.
Probab=100.00 E-value=8e-33 Score=279.39 Aligned_cols=219 Identities=16% Similarity=0.115 Sum_probs=154.2
Q ss_pred eeecchhh-hhhccccccceeeeeee----------hhhhhcccC-----CceEEEEccCCCCCCCCceEEECCCCCcCC
Q 020474 24 LSYGTAGF-RADASILQSTVYRVGIL----------AALRSLKTQ-----CVIGLMITASHNKVTDNGVKIADPSGGMLS 87 (325)
Q Consensus 24 ~~ygtagf-r~~a~~L~~~~~~vgi~----------~~~~~~~~~-----~~~GVmITASHNP~~~NGiKi~~~~G~~l~ 87 (325)
-++.+--| |..|+.|.+.|++|..+ .+|.+++.+ +.+||||||||||++|||||+++++|.+++
T Consensus 86 ~R~sS~~~~~a~a~gL~s~Gi~V~~~~~~G~~pTP~~~~av~~~~~~~~~~~gGI~ITASHNP~e~NGiK~~~~~G~~i~ 165 (543)
T TIGR01132 86 THALSEPAFISVLEVLAANGVEVIVQENNGFTPTPAVSHAILTHNKKGEPLADGIVITPSHNPPEDGGIKYNPPNGGPAD 165 (543)
T ss_pred CCcCCHHHHHHHHHHHHHCCCEEEEeCCCCcCCchHHHHHHHHhcccccccceEEEEeCCCCCCccCeEEEECCCCCCCC
Confidence 33333445 57788899999999974 234555555 778999999999999999999999999999
Q ss_pred CCccchhhhhhcCCCchhHHHHHHHHHHh---cC-CCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecce
Q 020474 88 QDWEPFSDQLANAPDPQSLVSLIEEFVKK---EK-IPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 88 ~~~e~~~~~i~n~~~~~~~~~~ie~~~~~---~~-~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
++++ ++||+.+.. .. .++. |...... ... |. +..
T Consensus 166 ~~~~----------------~~Ie~~i~~~~~~~~e~~~-------------~~~~~~~--------~~~-g~-~~~--- 203 (543)
T TIGR01132 166 TEAT----------------QAIEDRANALLANGLKGVK-------------RLPLAQA--------LAS-GT-VKA--- 203 (543)
T ss_pred hHHH----------------HHHHHHHHHhhhccccccc-------------ccChhhh--------hcc-Cc-eec---
Confidence 8655 356555322 10 0010 1000000 001 11 100
Q ss_pred ecchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEE
Q 020474 164 LTTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVR 243 (325)
Q Consensus 164 ~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~i 243 (325)
.+..+.|++++.+.++.. .++.+++||++||+||+++.+++++|++|| |+++.+
T Consensus 204 -----------------~d~~~~Y~~~l~~~i~~~--------~i~~~~lkVvvD~~~Ga~~~~~~~il~~lG-~~v~~l 257 (543)
T TIGR01132 204 -----------------HDLVQPYVDGLADIVDMA--------AIQKAGLRLGVDPLGGSGIDYWKRIAEKYN-LNLTLV 257 (543)
T ss_pred -----------------CCcHHHHHHHHHHhhhhh--------hhhcCCceEEEeCCCCCcHHHHHHHHHHcC-CCEEEE
Confidence 356788999998887631 112237999999999999999999999999 999999
Q ss_pred cCCCCCCCCCC----------CCC-CcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHH
Q 020474 244 NSGKEGGVLNE----------GVG-ADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMAT 312 (325)
Q Consensus 244 n~~~d~~~~n~----------~~~-~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~ 312 (325)
|+.+|+.++.+ +|. +++++.+.+ ++ .++|+|++|||||||+++++++ + +++||++++|++
T Consensus 258 ~~~~d~~f~~~~pd~~~~~~~~~~~~e~l~~l~~--~~-~~aDlGia~DgDaDR~~vvd~~-g----~i~gd~~~aLla- 328 (543)
T TIGR01132 258 NPQVDPTFRFMTLDKDGKIRMDCSSPYAMAGLLA--LR-DKYDLAFGNDPDYDRHGIVTPA-G----LMNPNHYLAVAI- 328 (543)
T ss_pred cCeeCCCCCCCCCCcccccCCCCCCHHHHHHHhh--cc-cCCCEEEEeCCCCCCeeEEecC-c----eeCHHHHHHHHH-
Confidence 99998765432 222 245555555 46 7899999999999999955553 2 599999999999
Q ss_pred HHHhhhcc
Q 020474 313 RYYLYSLY 320 (325)
Q Consensus 313 ~~~~~~~~ 320 (325)
+||++..
T Consensus 329 -~~ll~~~ 335 (543)
T TIGR01132 329 -NYLFQHR 335 (543)
T ss_pred -HHHHHhC
Confidence 8887653
No 30
>PRK07564 phosphoglucomutase; Validated
Probab=100.00 E-value=2.4e-32 Score=275.95 Aligned_cols=225 Identities=18% Similarity=0.154 Sum_probs=157.4
Q ss_pred Ccceeecchhh-hhhccccccceeeeeee----------hhhhhcccC-----CceEEEEccCCCCCCCCceEEECCCCC
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGIL----------AALRSLKTQ-----CVIGLMITASHNKVTDNGVKIADPSGG 84 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~----------~~~~~~~~~-----~~~GVmITASHNP~~~NGiKi~~~~G~ 84 (325)
+.|-++.+.-| +..|+.|.+.|++|.++ .+|.+++.+ +.+||||||||||++|||||+++++|.
T Consensus 82 G~D~R~~S~~~a~a~a~gL~s~Gi~V~~~~~~g~~pTP~~~~av~~~~~~~~~~~gGImITASHNP~e~NGiK~~~~~G~ 161 (543)
T PRK07564 82 GGDTHALSEPAIQSALEVLAANGVGVVIVGRGGYTPTPAVSHAILKYNGRGGGLADGIVITPSHNPPEDGGIKYNPPNGG 161 (543)
T ss_pred EecCCcCCHHHHHHHHHHHHHCCCEEEEeCCCCcCCchHHHHHHHHhCCCccccceeEEEecCCCCcccCeEEEECCCCC
Confidence 34555666677 57888999999999966 134555666 999999999999999999999999999
Q ss_pred cCCCCccchhhhhhcCCCchhHHHHHHHHHHhcCC-CCCCCCCceEEeccCC-CCChHHHHHHHHHHHHhhcCCceeecc
Q 020474 85 MLSQDWEPFSDQLANAPDPQSLVSLIEEFVKKEKI-PFNGKHPAEILLGRDT-RPSGESLLEAAKQGISAVVGAVAHDMG 162 (325)
Q Consensus 85 ~l~~~~e~~~~~i~n~~~~~~~~~~ie~~~~~~~~-~~~~~~~~~V~vg~D~-r~ss~~L~~al~~Gl~s~~G~~v~dlg 162 (325)
+++++.+ ++||+.+.+... ... |. |..... +..- |. +..
T Consensus 162 ~i~~~~~----------------~~Ie~~~~~~~~~~~e-----------~~~~~~~~~--------~~~~-g~-~~~-- 202 (543)
T PRK07564 162 PADTDVT----------------DAIEARANELLAYGLK-----------GVKRIPLDR--------ALAS-MT-VEV-- 202 (543)
T ss_pred cCChHHH----------------HHHHHHHHhhhhcccc-----------cccccChhH--------hccC-Cc-EEe--
Confidence 9998554 456655422100 000 00 100010 0000 11 111
Q ss_pred eecchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEE
Q 020474 163 ILTTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEV 242 (325)
Q Consensus 163 ~~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~ 242 (325)
.+..+.|++++.+.++.. .++++++||++||+||+++.+++++|++|| |+++.
T Consensus 203 ------------------~d~~~~Y~~~l~~~i~~~--------~i~~~~lkIvvD~~~G~~~~~~~~ll~~lG-~~v~~ 255 (543)
T PRK07564 203 ------------------IDPVADYVEDLENVFDFD--------AIRKAGLRLGVDPLGGATGPYWKAIAERYG-LDLTV 255 (543)
T ss_pred ------------------cccHHHHHHHHHHhhChh--------hhhcCCceEEEecCCCCcHHHHHHHHHHcC-CcEEE
Confidence 356788999998887531 112237999999999999999999999999 89999
Q ss_pred EcCCCCCCCC--------CCCCCCcchhhhhccCC-CCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHH
Q 020474 243 RNSGKEGGVL--------NEGVGADFVQKEKVVPH-GFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATR 313 (325)
Q Consensus 243 in~~~d~~~~--------n~~~~~~~l~~l~~~v~-~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~ 313 (325)
+|+.+|+.++ ++.|.++..+.+...+. + .++|+|++|||||||++++++ + .+++||++++|++
T Consensus 256 l~~~~d~~f~~~~~~~~~~~~p~P~~~~~L~~l~~~~-~~adlGia~DgDgDRl~vvd~-G----~~i~~d~~~alla-- 327 (543)
T PRK07564 256 VNAPVDPTFNFMPLDDDGKIRMDCSSPYAMAGLLALK-DAFDLAFANDPDGDRHGIVTP-G----GLMNPNHYLAVAI-- 327 (543)
T ss_pred eCCcCCCCCCCCCCCccCCcCCCCChHHHHHHHHhhc-cCCCEEEEECCCCCceeEEec-C----eeechhHHHHHHH--
Confidence 9999887441 11122232334444443 5 789999999999999995555 4 7999999999998
Q ss_pred HHhhhc
Q 020474 314 YYLYSL 319 (325)
Q Consensus 314 ~~~~~~ 319 (325)
+||++.
T Consensus 328 ~~ll~~ 333 (543)
T PRK07564 328 AYLFHH 333 (543)
T ss_pred HHHHHh
Confidence 777653
No 31
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6e-33 Score=270.15 Aligned_cols=237 Identities=17% Similarity=0.178 Sum_probs=166.5
Q ss_pred Ccceeecchhh-hhhccccccceeeeeeehh--------hhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCcc
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGILAA--------LRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWE 91 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~~~--------~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e 91 (325)
|++-+|-+-=| |..|.+|..+|++|+++.- +.+.+++|++||||||||||++|||+|+|+.+|+|+-+
T Consensus 108 G~D~R~~S~~fA~l~a~vf~~~g~~v~lf~~~v~TP~vpfav~~l~~dAgIMiTASHnPk~dNGyKvYwsNG~qii~--- 184 (607)
T KOG1220|consen 108 GHDGRYNSKRFAELVAAVFLLNGFKVYLFSELVPTPFVPFAVLTLGADAGIMITASHNPKEDNGYKVYWSNGAQIIS--- 184 (607)
T ss_pred ecCCccchHHHHHHHHHHHHhCCceEEEeccccCCCcchhHHHHhccCceEEEeccCCccccCCEEEEecCCccccC---
Confidence 67888988889 7889999999999999952 34446899999999999999999999999999998887
Q ss_pred chhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHH
Q 020474 92 PFSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHW 171 (325)
Q Consensus 92 ~~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f 171 (325)
+++++|. +.|++.+.... . .+|. +....+.+.... +
T Consensus 185 PhD~~I~---------~~~~~nl~p~~---s---------~wd~---slv~s~~l~~d~----------~---------- 220 (607)
T KOG1220|consen 185 PHDEKIS---------DSIEANLEPRL---S---------SWDD---SLVKSHPLLHDI----------L---------- 220 (607)
T ss_pred chhHHHH---------HHHHhccCccc---c---------hhhh---hHHhcchhhcCc----------h----------
Confidence 6665543 24443321110 0 0111 110000000000 0
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccE---EEEcCCCC
Q 020474 172 MVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDI---EVRNSGKE 248 (325)
Q Consensus 172 ~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v---~~in~~~d 248 (325)
.-..+.|++.+.+.+....... ..+.++++|++++||+|+.++.+.|+.++ +.. +...++||
T Consensus 221 ---------~~~~~~~~e~~k~~l~~~~~e~-----n~~s~~~fVyta~hGvG~~F~~~al~~~~-~~~~~~v~eq~~Pd 285 (607)
T KOG1220|consen 221 ---------AVIIPPYFEVYKELLPCFHREA-----NPLSGLKFVYTAGHGVGGFFVKKALEKLG-LDTMISVPEQLEPD 285 (607)
T ss_pred ---------hccchHHHHHHHhcCccHhhhh-----ccCCCceEEEecCCCccHHHHHHHHHHhC-CCccccchhhcCCC
Confidence 1123457777766554321111 12347999999999999999999999999 543 23455788
Q ss_pred CCCCC-CCCCCcc---hhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhccccC
Q 020474 249 GGVLN-EGVGADF---VQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLYSSR 323 (325)
Q Consensus 249 ~~~~n-~~~~~~~---l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~ 323 (325)
|.||+ +-|.+|. ++-..+.+.+ +++|+++++|+|+||++++.. -++.|..++||++|+||+ .|++.+++.+
T Consensus 286 p~FPt~~~PNPEek~aL~ls~~~a~~-n~~dlvlanDpDaDR~avaek-~~G~wr~fnGNElgALl~--~~~le~~k~~ 360 (607)
T KOG1220|consen 286 PMFPTVPFPNPEEKGALDLSIKAALK-NSADLVLANDPDADRFAVAEK-VSGEWRVFNGNELGALLS--WWVLEEHKGS 360 (607)
T ss_pred CCCCCCCCCCcchHHHHHHHHHHHhc-cCCcEEEecCCCcchhhheec-cCCcceeccchHHHHHHH--HHHHHhccCC
Confidence 87766 4444443 4444555566 899999999999999996555 677899999999999999 9999998865
No 32
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/ph
Probab=100.00 E-value=2.6e-32 Score=272.78 Aligned_cols=230 Identities=15% Similarity=0.116 Sum_probs=166.9
Q ss_pred cceeecchhh-hhhccccccceeeeeeeh--------hhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccc
Q 020474 22 VKLSYGTAGF-RADASILQSTVYRVGILA--------ALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEP 92 (325)
Q Consensus 22 ~~~~ygtagf-r~~a~~L~~~~~~vgi~~--------~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~ 92 (325)
.|-++-+.-| |..+..|.+.|++|..+- .+..++.++.+||||||||||++|||||+++++|.++.++.+
T Consensus 52 ~D~R~~s~~~~~a~~~gL~s~Gi~V~~~g~~~ptP~~~~~i~~~~~~gGI~iTaSHnp~~~nGiK~~~~~G~~~~~~~~- 130 (487)
T cd05799 52 YDSRHNSREFAELTAAVLAANGIKVYLFDDLRPTPLLSFAVRHLGADAGIMITASHNPKEYNGYKVYWEDGAQIIPPHD- 130 (487)
T ss_pred cCCCCChHHHHHHHHHHHHHCCCEEEEeCCCCCCcHHHHHHHHhCCCeeEEEEeeCCCcccCCEEEecCCCCcCCCHHH-
Confidence 3455555566 577888999998888773 344556789999999999999999999999999999998655
Q ss_pred hhhhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHH
Q 020474 93 FSDQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWM 172 (325)
Q Consensus 93 ~~~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~ 172 (325)
++|++.+.+.. ++. + .+ +.. ..+.|.+.+.
T Consensus 131 ---------------~~Ie~~~~~~~-~~~-------------~--~~-~~~-------------~~~~g~~~~~----- 160 (487)
T cd05799 131 ---------------AEIAEEIEAVL-EPL-------------D--IK-FEE-------------ALDSGLIKYI----- 160 (487)
T ss_pred ---------------HHHHHHHHhcc-ccc-------------c--cc-hhh-------------hccCCceEEc-----
Confidence 46776664310 010 0 00 000 0011111110
Q ss_pred HHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCcc---EEEEcCCCCC
Q 020474 173 VRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELD---IEVRNSGKEG 249 (325)
Q Consensus 173 v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~---v~~in~~~d~ 249 (325)
..+..+.|++.|.+.++.. . .++.+++||+|||+||+++.+++++|+.|| |+ +..++++||+
T Consensus 161 -------~~~~~~~Y~~~l~~~i~~~-~------~~~~~~~kVvvD~~~G~~~~~~~~il~~LG-~~~v~~~~~~~~~d~ 225 (487)
T cd05799 161 -------GEEIDDAYLEAVKKLLVNP-E------LNEGKDLKIVYTPLHGVGGKFVPRALKEAG-FTNVIVVEEQAEPDP 225 (487)
T ss_pred -------chHHHHHHHHHHHhhhccc-c------cccCCCCcEEEeCCCCccHHHHHHHHHHcC-CCCcEEeeeccCCCc
Confidence 0145678999998887631 0 012347999999999999999999999999 88 5667888998
Q ss_pred CCCC---CCCC-CcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhcc
Q 020474 250 GVLN---EGVG-ADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSLY 320 (325)
Q Consensus 250 ~~~n---~~~~-~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~~ 320 (325)
.|++ |+|. +++++.+++.+++ .++|+|++|||||||++++++++...|+++++|++++|++ +|+++..
T Consensus 226 ~F~~~~~p~p~~~~~l~~l~~~v~~-~~ad~Gia~D~DgDR~~vvd~~~~~~g~~~~~d~l~aL~a--~~ll~~~ 297 (487)
T cd05799 226 DFPTVKFPNPEEPGALDLAIELAKK-VGADLILATDPDADRLGVAVKDKDGEWRLLTGNEIGALLA--DYLLEQR 297 (487)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHH-hCCCEEEEeCCCCCeEEEEEEcCCCCEEEECHHHHHHHHH--HHHHHhH
Confidence 7643 3332 4678889999988 8999999999999999966665334589999999999999 7787654
No 33
>PRK14319 glmM phosphoglucosamine mutase; Provisional
Probab=100.00 E-value=2.2e-32 Score=269.30 Aligned_cols=201 Identities=26% Similarity=0.248 Sum_probs=152.1
Q ss_pred hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcCCCch
Q 020474 32 RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQ 104 (325)
Q Consensus 32 r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~ 104 (325)
|..++.|.+.|++|..+ ..| ..+..+.+||||||||||++|||||++. +|.++++++|
T Consensus 52 ~a~~~gL~s~G~~V~d~g~~pTP~~~~-~~~~~~~gGi~ItaSHnp~~~ngiK~~~-~G~~i~~~~~------------- 116 (430)
T PRK14319 52 AALVAGITSAGADVYRCGVLPTPALAL-ITKLEDAAGVMISASHNPPEYNGLKVLM-RGYKLPDEVE------------- 116 (430)
T ss_pred HHHHHHHHHCCCeEEEeCCcCcHHHHH-HHhccCceEEEEEeCCCChHHCCEEEec-CCCCCCHHHH-------------
Confidence 56777888888877766 123 3334445999999999999999999995 8998887544
Q ss_pred hHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCCh
Q 020474 105 SLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATE 184 (325)
Q Consensus 105 ~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~ 184 (325)
++||+..+... .. .. .+ . | ++... .+..
T Consensus 117 ---~~ie~~~~~~~--~~------------~~--~~------------~-g-~~~~~-------------------~~~~ 144 (430)
T PRK14319 117 ---ERIEKEMNEIH--YS------------PY--NE------------V-G-CVIDY-------------------KLAF 144 (430)
T ss_pred ---HHHHHHHhccC--Cc------------cc--cc------------C-e-eEEec-------------------cchH
Confidence 45655432110 00 00 00 1 2 11110 3456
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhh
Q 020474 185 SDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKE 264 (325)
Q Consensus 185 ~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l 264 (325)
+.|++++.+.++. .+ .+++||++||+||+++.+++++|++|| |+++.+|++|||.++|++|++++++.+
T Consensus 145 ~~Y~~~l~~~~~~-~~---------~~~~kvvvD~~nGa~~~~~~~ll~~Lg-~~v~~ln~~~dg~~~~~~~~~~~~~~l 213 (430)
T PRK14319 145 EEYFNYIKQQYEG-LD---------LSGIKIVVDVANGATYELNPYILEYFG-AKVEVVNNTPDGFNINVDCGSTHPENA 213 (430)
T ss_pred HHHHHHHHHhcCc-cc---------cCCCEEEEECCCChHHHHHHHHHHHcC-CEEEEECCCCCCCCCCCCCCCCCHHHH
Confidence 8899999887752 11 137999999999999999999999999 999999999999999999999999999
Q ss_pred hccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 265 KVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 265 ~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
++.+. ++|+|++|||||||++++ |+. +++++||++.+|++ .||++.
T Consensus 214 ~~~v~---~~dlGia~DgDaDR~~~v-d~~---G~~i~~d~~~~l~a--~~ll~~ 259 (430)
T PRK14319 214 KEKIT---NHKIAILHDGDGDRCIFL-DEK---GQEFHGDKIIGLTA--KHLKKE 259 (430)
T ss_pred HHHHH---hcCEEEEEcCCCceEEEE-CCC---CCEeChhHHHHHHH--HHHHHh
Confidence 98874 469999999999999955 443 37999999999998 777664
No 34
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
Probab=100.00 E-value=2.8e-32 Score=274.98 Aligned_cols=232 Identities=18% Similarity=0.144 Sum_probs=160.0
Q ss_pred Ccceeecchhh-hhhccccccceeeeeee----h------hhhhcccCCceEEEEccCCCC---CCCCceEEECCCCCcC
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGIL----A------ALRSLKTQCVIGLMITASHNK---VTDNGVKIADPSGGML 86 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~----~------~~~~~~~~~~~GVmITASHNP---~~~NGiKi~~~~G~~l 86 (325)
++|-++.+.-| +..|++|.+.|++|.++ . +|.++++++++|||||||||| ++|||||+++++|.++
T Consensus 55 G~D~R~~S~~~a~~~a~~L~~~G~~V~~~~~~G~~pTP~l~fav~~~~a~gGImITASHNP~~~~eyNGiK~~~~~G~~i 134 (548)
T cd03085 55 GGDGRYYNKEAIQIIIKIAAANGVGKVVVGQNGLLSTPAVSAVIRKRKATGGIILTASHNPGGPEGDFGIKYNTSNGGPA 134 (548)
T ss_pred EECCCcChHHHHHHHHHHHHHCCCeEEEeCCCCccCchHHHHHHHhcCCCeEEEEecCCCCCCCCcCCcEEEecCCCCcC
Confidence 45667777788 58899999999999987 1 345667899999999999999 7999999999999999
Q ss_pred CCCccchhhhhhcCCCchhHHHHHHHHHHhc-CCCCCCCCCceEEeccCCCC-ChHHHHHHHHHHHHhhcCCceeecce-
Q 020474 87 SQDWEPFSDQLANAPDPQSLVSLIEEFVKKE-KIPFNGKHPAEILLGRDTRP-SGESLLEAAKQGISAVVGAVAHDMGI- 163 (325)
Q Consensus 87 ~~~~e~~~~~i~n~~~~~~~~~~ie~~~~~~-~~~~~~~~~~~V~vg~D~r~-ss~~L~~al~~Gl~s~~G~~v~dlg~- 163 (325)
.++.+ ++|++.+... ..... |.+. .... . |. +..++.
T Consensus 135 ~~~~~----------------~~I~~~i~~ie~~~~~-----------~~~~~~~~~-----------~-g~-i~~~~~~ 174 (548)
T cd03085 135 PESVT----------------DKIYEITKKITEYKIA-----------DDPDVDLSK-----------I-GV-TKFGGKP 174 (548)
T ss_pred CcHHH----------------HHHHHHHHhccccccc-----------cccccChhh-----------c-Cc-eeecccC
Confidence 98654 2443332211 00000 0010 0000 1 10 000000
Q ss_pred ecchhHHHHHHHhccCCCCChHHHHHHHHHHHHh-hhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHH-HcCCccE-
Q 020474 164 LTTPQLHWMVRARNKGLKATESDYFEQLLSSFRC-LMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKE-KLNELDI- 240 (325)
Q Consensus 164 ~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~-~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~-~Lg~~~v- 240 (325)
...+ -.+..+.|++++.+.++. .++.. ...+++|||+||+||+++.+++++|+ +|| |++
T Consensus 175 ~~~~------------~~d~~~~Yi~~l~~~v~~~~i~~~-----~~~~~lkVVvD~~nGag~~~~~~lL~~~LG-~~~v 236 (548)
T cd03085 175 FTVE------------VIDSVEDYVELMKEIFDFDAIKKL-----LSRKGFKVRFDAMHGVTGPYAKKIFVEELG-APES 236 (548)
T ss_pred CceE------------EecCHHHHHHHHHhhhCHHHHhhh-----cccCCCEEEEeCCcchhHHHHHHHHHHhcC-CCce
Confidence 0000 024568899999887753 11110 00137999999999999999999996 899 875
Q ss_pred EEEcCCCCCCCCC--CCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhh
Q 020474 241 EVRNSGKEGGVLN--EGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLY 317 (325)
Q Consensus 241 ~~in~~~d~~~~n--~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~ 317 (325)
..+|+.|||.|++ |+|.+++++.+++.+++ .+||+|+++||||||++++++ + +++.++++.+|++ +++|.
T Consensus 237 ~~i~~~pDg~Fp~~~P~P~~~~l~~L~~~V~~-~~ADlGia~DgDaDRl~vvd~-G----~~i~~d~~lall~-~~ll~ 308 (548)
T cd03085 237 SVVNCTPLPDFGGGHPDPNLTYAKDLVELMKS-GEPDFGAASDGDGDRNMILGK-G----FFVTPSDSVAVIA-ANAKL 308 (548)
T ss_pred EEEeCeeCCCCCCCCCCCcHHHHHHHHHHHhc-cCCCEEEEECCCCCceEEEec-C----EEecCCHHHHHHH-HHHHH
Confidence 6799999987743 45556889999999999 999999999999999996554 3 5777777777776 34443
No 35
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed
Probab=99.98 E-value=7.4e-32 Score=266.64 Aligned_cols=213 Identities=19% Similarity=0.195 Sum_probs=155.8
Q ss_pred ceeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchh
Q 020474 23 KLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFS 94 (325)
Q Consensus 23 ~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~ 94 (325)
+-+..+.-| +..++.|.+.|++|..+ ..|..++.++ +|+||||||||++|||+|++.+.|.++.++.+
T Consensus 43 D~R~~s~~l~~a~~~gL~s~G~~V~~lg~~pTP~~~~av~~~~~-~Gi~iTaSHNP~~~nG~Ki~~~~~~~~~~~~~--- 118 (445)
T PRK09542 43 DMRDSSPELAAAFAEGVTAQGLDVVRIGLASTDQLYFASGLLDC-PGAMFTASHNPAAYNGIKLCRAGAKPVGQDTG--- 118 (445)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEEeCCCCCHHHHheecccCC-CEEEEcCCCCCCccCcEEEecCCCcccCchhH---
Confidence 444444455 57888899999998877 2455566777 69999999999999999999887777665211
Q ss_pred hhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHH
Q 020474 95 DQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVR 174 (325)
Q Consensus 95 ~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~ 174 (325)
++++++.+.+. +.. ++.. . | .+. +
T Consensus 119 ------------i~~i~~~~~~~-~~~-----------~~~~----------------~-g-~~~-------~------- 142 (445)
T PRK09542 119 ------------LAAIRDDLIAG-VPA-----------YDGP----------------P-G-TVT-------E------- 142 (445)
T ss_pred ------------HHHHHHHHhcc-ccc-----------ccCC----------------C-C-cee-------c-------
Confidence 12333332221 000 0000 1 1 110 1
Q ss_pred HhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCC
Q 020474 175 ARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNE 254 (325)
Q Consensus 175 ~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~ 254 (325)
.+..+.|++++.+.++. . .+ +++||+|||+||+++.+++++|+.|| |+++.+|+++|+.|+++
T Consensus 143 ------~~~~~~Y~~~l~~~i~~--~------~i--~~lkVvvd~~~Ga~~~~~~~ll~~lg-~~vv~~~~~~d~~Fp~~ 205 (445)
T PRK09542 143 ------RDVLADYAAFLRSLVDL--S------GI--RPLKVAVDAGNGMGGHTVPAVLGGLP-ITLLPLYFELDGTFPNH 205 (445)
T ss_pred ------cChHHHHHHHHHHhccc--c------cC--CCCEEEEECCCCchhHHHHHHHHhCC-CEEEEEecCcCCCCCCC
Confidence 35678899999888753 1 11 37999999999999999999999999 99999999999887654
Q ss_pred CCC---CcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 255 GVG---ADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 255 ~~~---~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
.|. +++++.+++.+++ .++|+|++|||||||+++++++| .++++|++++|++ .|+++.
T Consensus 206 ~p~P~~~~~l~~l~~~v~~-~~adlGia~DgD~DR~~ivd~~G----~~l~~d~~~~l~~--~~~l~~ 266 (445)
T PRK09542 206 EANPLDPANLVDLQAFVRE-TGADIGLAFDGDADRCFVVDERG----QPVSPSAVTALVA--ARELAR 266 (445)
T ss_pred CcCCCCHHHHHHHHHHHHH-cCCCEEEEECCCCceEEEECCCC----CCccHHHHHHHHH--HHHHHH
Confidence 433 4678889999988 89999999999999998555543 6799999999998 666654
No 36
>PLN02307 phosphoglucomutase
Probab=99.98 E-value=5.2e-32 Score=273.87 Aligned_cols=235 Identities=15% Similarity=0.087 Sum_probs=150.9
Q ss_pred Ccceeecchhh-hhhccccccceeeeeeeh----------hhhhccc---CCceEEEEccCCCC---CCCCceEEECCCC
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGILA----------ALRSLKT---QCVIGLMITASHNK---VTDNGVKIADPSG 83 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~~----------~~~~~~~---~~~~GVmITASHNP---~~~NGiKi~~~~G 83 (325)
++|-++.+.-| +..|++|.+.|++|.++. +|.+++. ++++|||||||||| ++|||||+++++|
T Consensus 67 G~D~R~~S~~fa~~~a~~L~a~Gi~V~~~~~~G~~PTP~vsfav~~~~~~~a~gGImITASHNP~~~~eyNGiK~~~~~G 146 (579)
T PLN02307 67 GGDGRYFNKEAIQIIIKIAAANGVRRVWVGQNGLLSTPAVSAVIRERDGSKANGGFILTASHNPGGPEEDFGIKYNYESG 146 (579)
T ss_pred EeCCCcchHHHHHHHHHHHHHCCCEEEEeCCCCccCchHHHHHHHHhcccCCCeEEEEecCCCCCCCCCCCEEEEECCCC
Confidence 46777778888 688999999999998872 4566677 89999999999999 8999999999999
Q ss_pred CcCCCCccchhhhhhcCCCchhHHHHHHHHHHhc-CCCCCCCCCceEEeccCCCCC-hHHHHHHHHHH-HHhhcCCceee
Q 020474 84 GMLSQDWEPFSDQLANAPDPQSLVSLIEEFVKKE-KIPFNGKHPAEILLGRDTRPS-GESLLEAAKQG-ISAVVGAVAHD 160 (325)
Q Consensus 84 ~~l~~~~e~~~~~i~n~~~~~~~~~~ie~~~~~~-~~~~~~~~~~~V~vg~D~r~s-s~~L~~al~~G-l~s~~G~~v~d 160 (325)
+++.++.+ ++|++.+.+. .+.... ....+ +.... ...+ + .... ..+.
T Consensus 147 ~~~~~~~~----------------~~I~~~i~~~~~~~~~~-~~~~~----~~~~~~~~~~------~~~~~~-~~~~-- 196 (579)
T PLN02307 147 QPAPESIT----------------DKIYGNTLTIKEYKMAE-DIPDV----DLSAVGVTKF------GGPEDF-DVEV-- 196 (579)
T ss_pred CcCCcHHH----------------HHHHHHHHhhhhhhhcc-ccccc----chhhhccccc------cccccc-ceEE--
Confidence 99998543 2443222110 000000 00000 00000 0000 0 0000 0011
Q ss_pred cceecchhHHHHHHHhccCCCCChHHHHHHHHHHHHh-hhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHH-HHcCCc
Q 020474 161 MGILTTPQLHWMVRARNKGLKATESDYFEQLLSSFRC-LMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIK-EKLNEL 238 (325)
Q Consensus 161 lg~~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~-~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll-~~Lg~~ 238 (325)
.+..+.|++++.+.++. .++. ....+++||++||+||+|+.+++++| ++|| +
T Consensus 197 --------------------~d~~~~Yi~~l~~~i~~~~i~~-----~~~~~~lkVvvD~~hGag~~~~~~lL~~~lG-~ 250 (579)
T PLN02307 197 --------------------IDPVEDYVKLMKSIFDFELIKK-----LLSRPDFTFCFDAMHGVTGAYAKRIFVEELG-A 250 (579)
T ss_pred --------------------ecCHHHHHHHHHHhhCHHHHhh-----hcccCCCeEEEeCCCCccHHHHHHHHHHhcC-C
Confidence 24568899999887752 1111 01123799999999999999999999 7999 8
Q ss_pred cEE-EEcCCCCCCCCCCCCCC--cchhhhhccC-------CCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHH
Q 020474 239 DIE-VRNSGKEGGVLNEGVGA--DFVQKEKVVP-------HGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLIL 308 (325)
Q Consensus 239 ~v~-~in~~~d~~~~n~~~~~--~~l~~l~~~v-------~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~ 308 (325)
+++ .+|++|||.|++..|.+ +.+.++...+ .. .++|+|+++||||||++++ +.+ .++.++++..
T Consensus 251 ~~~~~i~~~pDg~Fp~~~PnP~~~~l~~lv~~~~~~~~~~~~-~~aDlgiA~DgDaDR~~vv-~~g----~~i~~d~~l~ 324 (579)
T PLN02307 251 PESSLLNCVPKEDFGGGHPDPNLTYAKELVKRMGLGKTSYGD-EPPEFGAASDGDGDRNMIL-GKR----FFVTPSDSVA 324 (579)
T ss_pred CceeeecCccCCCCCCCCCCCCHHHHHHHHHHhhhccccccc-cCCCEEEEeCCCCCeEEEE-ecC----cEEcCChHHH
Confidence 886 89999999876543333 3334443333 12 3599999999999999865 653 4555555555
Q ss_pred HHHHHHHhhh
Q 020474 309 LMATRYYLYS 318 (325)
Q Consensus 309 l~~~~~~~~~ 318 (325)
|++ ++|+.+
T Consensus 325 ll~-~~~l~~ 333 (579)
T PLN02307 325 IIA-ANAQEA 333 (579)
T ss_pred HHH-HHHHHh
Confidence 554 255443
No 37
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrall
Probab=99.97 E-value=3.5e-31 Score=262.78 Aligned_cols=210 Identities=20% Similarity=0.136 Sum_probs=151.4
Q ss_pred ceeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchh
Q 020474 23 KLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFS 94 (325)
Q Consensus 23 ~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~ 94 (325)
|-++.+.=| |..|+.|.+.|++|..+ ..+.+++.++ +||||||||||++|||||+++++| ++.+..|
T Consensus 44 D~R~~s~~l~~a~~~gL~~~Gv~V~~~g~~pTP~~~~a~~~~~~-ggI~ITaSHnp~~~nGiK~~~~~G-~~~~~~e--- 118 (459)
T cd03088 44 DLRPSSPRIAAACAAALRDAGFRVVDCGAVPTPALALYAMKRGA-PAIMVTGSHIPADRNGLKFYRPDG-EITKADE--- 118 (459)
T ss_pred CCCcchHHHHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHcCC-cEEEEeCCCCCCCCCCEEEECCCC-CCChHHH---
Confidence 333444444 57788899999888887 2344555655 899999999999999999999999 4554333
Q ss_pred hhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHH
Q 020474 95 DQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVR 174 (325)
Q Consensus 95 ~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~ 174 (325)
++|++..+.. ... ..+ .. .. + .+..
T Consensus 119 -------------~~I~~~~~~~--~~~---------~~~-~~-~~--------------~-~~~~-------------- 143 (459)
T cd03088 119 -------------AAILAALVEL--PEA---------LFD-PA-GA--------------L-LPPD-------------- 143 (459)
T ss_pred -------------HHHHHHHHhh--ccc---------ccc-cc-cc--------------C-Cccc--------------
Confidence 2454443211 000 000 00 00 0 0000
Q ss_pred HhccCCCCChHHHHHHHHHHHHhhhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCCC
Q 020474 175 ARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLNE 254 (325)
Q Consensus 175 ~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~ 254 (325)
.+..+.|++.+.+.++. . .+ +++||++||+||+++.+++++|++|| |+++.+|+.++...++|
T Consensus 144 ------~~~~~~Y~~~l~~~i~~--~------~~--~~lkIvvD~~~G~~~~~~~~ll~~lG-~~v~~l~~~~~~~~~~~ 206 (459)
T cd03088 144 ------TDAADAYIARYTDFFGA--G------AL--KGLRIGVYQHSSVGRDLLVRILEALG-AEVVPLGRSDTFIPVDT 206 (459)
T ss_pred ------chHHHHHHHHHHHHhCc--c------cc--CCCEEEEECCCCCHHHHHHHHHHHcC-CeEEEeCCCCCCCCCCC
Confidence 34567899999887752 1 11 37999999999999999999999999 99999998777655566
Q ss_pred CCC-CcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHh
Q 020474 255 GVG-ADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYL 316 (325)
Q Consensus 255 ~~~-~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~ 316 (325)
++. +++++.+++.+++ .++|+|++|||||||++++++++ .++++|++++|++ +|+
T Consensus 207 ~~~~~~~l~~l~~~v~~-~~adlGia~D~DgDR~~vvd~~G----~~i~~d~l~~l~~--~~~ 262 (459)
T cd03088 207 EAVRPEDRALAAAWAAE-HGLDAIVSTDGDGDRPLVADETG----EWLRGDILGLLTA--RFL 262 (459)
T ss_pred CcCCHHHHHHHHHHHHh-cCCCEEEEeCCCCCCceeECCCC----CEECchHHHHHHH--HHh
Confidence 654 4788999999998 89999999999999999664443 5789999999998 665
No 38
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=99.82 E-value=2e-20 Score=177.76 Aligned_cols=217 Identities=17% Similarity=0.156 Sum_probs=137.5
Q ss_pred hhhhhccccccceeeeeeeh----------hhhhc----ccCC-ceEEEEccCCCCCCCCceEEECCCCCcCCCCccchh
Q 020474 30 GFRADASILQSTVYRVGILA----------ALRSL----KTQC-VIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFS 94 (325)
Q Consensus 30 gfr~~a~~L~~~~~~vgi~~----------~~~~~----~~~~-~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~ 94 (325)
-|...+++|+.+++.+-+.. +...+ +.++ .+||+||||||||+|-|||...++|+|.+++..+.+
T Consensus 70 a~~~~lev~aANgv~~iv~~~~g~~~TPAaSh~I~t~n~k~k~~~~GIvlT~SHNPP~D~GIKYN~~nGGPA~~~~T~aI 149 (524)
T COG0033 70 AIQSALEVLAANGVEVIVQGQGGFTPTPAASHAILTHNGKYKALADGIVLTPSHNPPEDGGIKYNPPNGGPAPEKVTDAI 149 (524)
T ss_pred HHHHHHHHHHhcCceEEEecCCCccCchHHHHHHHhhcccccccCCeEEEcCCCCCcccCCcccCCCCCCCCChHHHHHH
Confidence 45578899999999987772 22222 3444 446999999999999999999999999887444333
Q ss_pred hhhhcCCCchhHHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHH
Q 020474 95 DQLANAPDPQSLVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVR 174 (325)
Q Consensus 95 ~~i~n~~~~~~~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~ 174 (325)
..++| +. +....+++. + -+..+. +.+. -+++
T Consensus 150 ~~ra~-----------~~-~k~~~~~v~-----r-------~~~~~~--------~~~~-~v~~---------------- 180 (524)
T COG0033 150 EARAN-----------DL-YKIGLLDVK-----R-------IGLDQA--------YGSL-TVKI---------------- 180 (524)
T ss_pred HHHHH-----------HH-HHhhhcCcc-----c-------cchhhh--------cCcc-eeee----------------
Confidence 33222 11 111112222 0 010110 0001 1122
Q ss_pred HhccCCCCChHHHHHHHHHHHHh-hhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcC--CCCCCC
Q 020474 175 ARNKGLKATESDYFEQLLSSFRC-LMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNS--GKEGGV 251 (325)
Q Consensus 175 ~~n~~g~~~~~~Y~~~l~~~~~~-~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~--~~d~~~ 251 (325)
.+....|++.|.+.||. .++.. ..++.+|+++|+++.++.+++++-. .....+|. .|.+.|
T Consensus 181 ------~D~v~~Yv~~l~~i~D~daIr~~---------~~~l~~D~l~g~t~~Y~~~I~e~~~-~~~t~v~~~~~p~~~F 244 (524)
T COG0033 181 ------IDPVKDYVELLEEIFDFDAIRKA---------GLRLGFDPLGGVTGPYWKAIAEKYL-LNLTGVNQNVDPTPDF 244 (524)
T ss_pred ------ecchHHHHHHHHHhhcHHHHHHH---------HhhcccccccCccchhHHHHHHHhc-CCchhhccCcccCccc
Confidence 46788999999999986 34432 4789999999999999999997544 24444444 333222
Q ss_pred --------CCCCCCCcchhhhhccCCCCCCCcEEEEecCcCceeeeeeecCCceeeeechhHHHHHHHHHHHhhhc
Q 020474 252 --------LNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWMEMLIDLSIFLCHQITAARLILLMATRYYLYSL 319 (325)
Q Consensus 252 --------~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d~~~~~~~~~~g~~~~~l~~~~~~~~~~ 319 (325)
+...|.++++...--.+ . ...|+|++.||||||-+++..... +++-+.-.++.+ .||..-
T Consensus 245 ~~l~~D~ni~~~~ss~~~ma~l~~~-~-d~~d~~aanD~DgDR~~Iv~~~~~----~~nPn~~lAv~~--~y~~~~ 312 (524)
T COG0033 245 MGLDPDGNIRMDCSSPCAMAGLLRL-R-DKYDFAAANDGDGDRHGIVTPGAG----LMNPNHSLAVAI--EYLFLH 312 (524)
T ss_pred cCCCCCCCEeEecCcHHHHHHhhcc-c-cccccccccCCCcccceeecCCCc----ccCchHHHHHHH--HHHHhC
Confidence 22345444333221112 2 588999999999999996666433 788888888888 677543
No 39
>KOG0625 consensus Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=99.82 E-value=3.9e-20 Score=174.11 Aligned_cols=194 Identities=21% Similarity=0.262 Sum_probs=131.2
Q ss_pred CCceEEEEccCCCC---CCCCceEEECCCCCcCCCCccchhhhhhcCCCchhHHHHHHHHH--HhcCCCCCCCCCceEEe
Q 020474 57 QCVIGLMITASHNK---VTDNGVKIADPSGGMLSQDWEPFSDQLANAPDPQSLVSLIEEFV--KKEKIPFNGKHPAEILL 131 (325)
Q Consensus 57 ~~~~GVmITASHNP---~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~~~~~~~~~~ie~~~--~~~~~~~~~~~~~~V~v 131 (325)
.+.+||++|||||| ..|-|||+.-++|+++++.. .+.|.. ++..|+++- ...++++. .+
T Consensus 108 ka~GGiILTASHnPGGP~~DfGIKfN~~NGgPAPesv---TdkIy~------itk~i~eyki~~~~~iDls-------~v 171 (558)
T KOG0625|consen 108 KAGGGIILTASHNPGGPEGDFGIKFNLENGGPAPESV---TDKIYE------ITKTISEYKIAKDPKIDLS-------TV 171 (558)
T ss_pred ccCceEEEEeccCCCCCCCccceEEecCCCCCChHHH---HHHHHH------hhhhhhhceeecCcccchh-------hh
Confidence 67888999999998 67889999999999988733 344432 223555442 11122222 11
Q ss_pred ccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCChHHHHHHHHHHHHh-hhccCCCCCCCCC
Q 020474 132 GRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATESDYFEQLLSSFRC-LMNLIPDRGTSNE 210 (325)
Q Consensus 132 g~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~-~~~~~~~~~~i~~ 210 (325)
|+-... ++ . -++| -+..+.|++.+++.||. .++..- ...
T Consensus 172 G~~~~~-gp------------f-~Vev----------------------iDpv~~Yv~lmk~IFDF~~ik~ll----s~~ 211 (558)
T KOG0625|consen 172 GKTSFD-GP------------F-TVEV----------------------IDPVKDYVNLMKEIFDFDLIKSLL----SGP 211 (558)
T ss_pred cccccc-CC------------e-eEEE----------------------eccHHHHHHHHHHHhCHHHHHHHh----cCC
Confidence 111110 11 1 1344 35789999999999975 333221 112
Q ss_pred CCCeEEEECCCCChHHHHHHHH-HHcCCccEEEEcCCCCC--CCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCcee
Q 020474 211 TEDKLIVDGANGVGGEKLEVIK-EKLNELDIEVRNSGKEG--GVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWM 287 (325)
Q Consensus 211 ~~~kIvvD~~nG~g~~~~~~ll-~~Lg~~~v~~in~~~d~--~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl 287 (325)
+++|+.+|+|||+.+++.+.+| ++||.-.-..+|+.|-+ +..+|.|.-.|.+.|-+.+.. .+.|+|++|||||||-
T Consensus 212 ~~~k~~~DamhGvtGpY~~~IfvdelGa~~~~~~n~~Pl~DFGG~HPDPNLTYAk~LV~rv~~-~~~~fGAA~DGDGDRN 290 (558)
T KOG0625|consen 212 KKLKFRFDAMHGVTGPYVKAIFVDELGAPASSLQNCVPLEDFGGGHPDPNLTYAKDLVDRVDR-GEIDFGAAFDGDGDRN 290 (558)
T ss_pred CCceEEEeecccccchhhhHHHHhhhCCChHHhccCeeccccCCCCCCCchhhHHHHHHHhcc-CCCcccccccCCCcce
Confidence 4799999999999999998876 78993233456887754 336677888888888888877 8999999999999999
Q ss_pred eeeeecCCceeeeechhHHHHHHH
Q 020474 288 EMLIDLSIFLCHQITAARLILLMA 311 (325)
Q Consensus 288 ~~~~d~~~~~~~~~~g~~~~~l~~ 311 (325)
+++-.++. +++--.-.+++|
T Consensus 291 MIlG~~~f----FVtPsDSvAiIA 310 (558)
T KOG0625|consen 291 MILGKNGF----FVTPSDSVAIIA 310 (558)
T ss_pred eeeccCce----eeccchhHHHHH
Confidence 86666543 555555566666
No 40
>PF02879 PGM_PMM_II: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; InterPro: IPR005845 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain II found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 2F7L_A 3PDK_B 1KFQ_B 1KFI_A 1C47_A 1VKL_B 1LXT_A 1JDY_B 3PMG_A 1C4G_B ....
Probab=99.77 E-value=8e-19 Score=139.90 Aligned_cols=97 Identities=23% Similarity=0.316 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHH-h-hhccCCCCCCCCCCCCeEEEECCCCChHHHHHHHHHHcCCccEEEEcCCCCCCCCC---CCCCCc
Q 020474 185 SDYFEQLLSSFR-C-LMNLIPDRGTSNETEDKLIVDGANGVGGEKLEVIKEKLNELDIEVRNSGKEGGVLN---EGVGAD 259 (325)
Q Consensus 185 ~~Y~~~l~~~~~-~-~~~~~~~~~~i~~~~~kIvvD~~nG~g~~~~~~ll~~Lg~~~v~~in~~~d~~~~n---~~~~~~ 259 (325)
+.|++.|.+.|+ . .++ ++++||+|||+||+++.+++.||++|| ++++.+|+.+|+.+++ |+|..+
T Consensus 1 e~Y~~~l~~~~~~~~~~~---------~~~~kivvD~~~G~~~~~~~~ll~~lg-~~~~~~n~~~d~~f~~~~~p~p~~~ 70 (104)
T PF02879_consen 1 EAYIESLLSFIDILEAIK---------KSGLKIVVDCMNGAGSDILPRLLERLG-CDVIELNCDPDPDFPNQHAPNPEEE 70 (104)
T ss_dssp HHHHHHHHHTSCHHHHHH---------HTTCEEEEE-TTSTTHHHHHHHHHHTT-CEEEEESSS-STTGTTTSTSSTSTT
T ss_pred ChHHHHHhhhccchhhcc---------cCCCEEEEECCCCHHHHHHHHHHHHcC-CcEEEEecccccccccccccccccc
Confidence 579999999887 3 122 236999999999999999999999999 8999999999986654 444447
Q ss_pred chhhhhccCCCCCCCcEEEEecCcCceeeeeee
Q 020474 260 FVQKEKVVPHGFGSNHAGISFSGVQVWMEMLID 292 (325)
Q Consensus 260 ~l~~l~~~v~~~~~ad~Gia~DgDaDRl~~~~d 292 (325)
+++.+.+.+++ .++|+|++|||||||++++++
T Consensus 71 ~l~~~~~~v~~-~~ad~g~~~DgDaDRl~~vd~ 102 (104)
T PF02879_consen 71 SLQRLIKIVRE-SGADLGIAFDGDADRLGVVDE 102 (104)
T ss_dssp TTHHHHHHHHH-STTSEEEEE-TTSSBEEEEET
T ss_pred hhHHHHHHhhc-cCceEEEEECCcCceeEEECC
Confidence 78999999988 899999999999999996543
No 41
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain I found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 3I3W_B 1WQA_C 1KFQ_B 1KFI_A 2Z0F_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=99.41 E-value=6.6e-14 Score=117.09 Aligned_cols=81 Identities=30% Similarity=0.325 Sum_probs=57.6
Q ss_pred Ccceeecchhh-hhhccccccceeeeeee-------hhhhhcccCCceEEEEccCCCCCCCCceEEECCCCCcCCCCccc
Q 020474 21 GVKLSYGTAGF-RADASILQSTVYRVGIL-------AALRSLKTQCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEP 92 (325)
Q Consensus 21 ~~~~~ygtagf-r~~a~~L~~~~~~vgi~-------~~~~~~~~~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~ 92 (325)
+.|-+..+.=| +..++.|.+.|++|..+ ..+..++.++++||||||||||+.|||||+++++|.+++++.+
T Consensus 46 g~D~R~~s~~~~~~~~~~l~~~G~~V~~~g~~~tP~~~~~~~~~~~~ggi~iTaShnp~~~ngik~~~~~G~~~~~~~~- 124 (137)
T PF02878_consen 46 GRDTRPSSPMLAKALAAGLRANGVDVIDIGLVPTPALSFAIRQLNADGGIMITASHNPPGYNGIKFFDANGGPISPEEE- 124 (137)
T ss_dssp EE-SSTTHHHHHHHHHHHHHHTTEEEEEEEEB-HHHHHHHHHHHTESEEEEE--TTS-TTEEEEEEEETTSSB--HHHH-
T ss_pred EEcccCCHHHHHHHHHHHHhhcccccccccccCcHHhhhhccccccceeeEEEecCCCCCcceEEEEeCCCCcCCHHHH-
Confidence 34455555555 57788899888888877 2345566889999999999999999999999999999998544
Q ss_pred hhhhhhcCCCchhHHHHHHHHHHhc
Q 020474 93 FSDQLANAPDPQSLVSLIEEFVKKE 117 (325)
Q Consensus 93 ~~~~i~n~~~~~~~~~~ie~~~~~~ 117 (325)
++|++.+.++
T Consensus 125 ---------------~~I~~~~~~~ 134 (137)
T PF02878_consen 125 ---------------RKIEQIIERE 134 (137)
T ss_dssp ---------------HHHHHHHHHT
T ss_pred ---------------HHHHHHHHhh
Confidence 5777776553
No 42
>PF02878 PGM_PMM_I: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; InterPro: IPR005844 The alpha-D-phosphohexomutase superfamily is composed of four related enzymes, each of which catalyses a phosphoryl transfer on their sugar substrates: phosphoglucomutase (PGM), phosphoglucomutase/phosphomannomutase (PGM/PMM), phosphoglucosamine mutase (PNGM), and phosphoacetylglucosamine mutase (PAGM) []. PGM (5.4.2.2 from EC) converts D-glucose 1-phosphate into D-glucose 6-phosphate, and participates in both the breakdown and synthesis of glucose []. PGM/PMM (5.4.2.2 from EC; 5.4.2.8 from EC) are primarily bacterial enzymes that use either glucose or mannose as substrate, participating in the biosynthesis of a variety of carbohydrates such as lipopolysaccharides and alginate [, ]. Both PNGM (5.4.2.3 from EC) and PAGM (5.4.2.10 from EC) are involved in the biosynthesis of UDP-N-acetylglucosamine [, ]. Despite differences in substrate specificity, these enzymes share a similar catalytic mechanism, converting 1-phospho-sugars to 6-phospho-sugars via a biphosphorylated 1,6-phospho-sugar. The active enzyme is phosphorylated at a conserved serine residue and binds one magnesium ion; residues around the active site serine are well conserved among family members. The reaction mechanism involves phosphoryl transfer from the phosphoserine to the substrate to create a biophosphorylated sugar, followed by a phosphoryl transfer from the substrate back to the enzyme []. The structures of PGM and PGM/PMM have been determined, and were found to be very similar in topology. These enzymes are both composed of four domains and a large central active site cleft, where each domain contains residues essential for catalysis and/or substrate recognition. Domain I contains the catalytic phosphoserine, domain II contains a metal-binding loop to coordinate the magnesium ion, domain III contains the sugar-binding loop that recognises the two different binding orientations of the 1- and 6-phospho-sugars, and domain IV contains a phosphate-binding site required for orienting the incoming phospho-sugar substrate. This entry represents domain I found in alpha-D-phosphohexomutase enzymes. This domain has a 3-layer alpha/beta/alpha topology.; GO: 0016868 intramolecular transferase activity, phosphotransferases, 0005975 carbohydrate metabolic process; PDB: 3I3W_B 1WQA_C 1KFQ_B 1KFI_A 2Z0F_A 2FKM_X 3C04_A 1K2Y_X 1P5G_X 2H4L_X ....
Probab=98.77 E-value=2.5e-08 Score=83.25 Aligned_cols=54 Identities=35% Similarity=0.612 Sum_probs=49.5
Q ss_pred CCceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 125 HPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 125 ~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
.+++|+||||+|++|+++++++++||.+. |++|+++|.++||+++|+++++++.
T Consensus 39 ~~~~VvVg~D~R~~s~~~~~~~~~~l~~~-G~~V~~~g~~~tP~~~~~~~~~~~~ 92 (137)
T PF02878_consen 39 NGSRVVVGRDTRPSSPMLAKALAAGLRAN-GVDVIDIGLVPTPALSFAIRQLNAD 92 (137)
T ss_dssp TSSEEEEEE-SSTTHHHHHHHHHHHHHHT-TEEEEEEEEB-HHHHHHHHHHHTES
T ss_pred CCCeEEEEEcccCCHHHHHHHHHHHHhhc-ccccccccccCcHHhhhhccccccc
Confidence 46789999999999999999999999999 9999999999999999999998877
No 43
>PRK14316 glmM phosphoglucosamine mutase; Provisional
Probab=98.63 E-value=3.5e-08 Score=98.07 Aligned_cols=53 Identities=36% Similarity=0.600 Sum_probs=50.5
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++|+||||+|.+|++|++++++||.+. |++|+++|.+|||++||+++.+++.
T Consensus 40 ~~~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 92 (448)
T PRK14316 40 RPKVLVGRDTRISGDMLESALIAGLLSV-GAEVMRLGVIPTPGVAYLTRALGAD 92 (448)
T ss_pred CCeEEEEECCCcCHHHHHHHHHHHHHHC-CCEEEEecccchHHHHHHHHHhcCc
Confidence 4579999999999999999999999999 9999999999999999999999876
No 44
>PRK14323 glmM phosphoglucosamine mutase; Provisional
Probab=98.60 E-value=4.9e-08 Score=96.83 Aligned_cols=53 Identities=32% Similarity=0.579 Sum_probs=50.4
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++|+||||+|.+|++|++++++||++. |++|+|+|.++||++||+++.+++.
T Consensus 42 ~~~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 94 (440)
T PRK14323 42 RPVVLLGKDTRQSGDMLEAALAAGLTSR-GVRVEHLGVLPTPGVSYLTRHLGAT 94 (440)
T ss_pred CCeEEEEeCCCccHHHHHHHHHHHHHHC-CCEEEEecccChHHHHHHHHHhCCC
Confidence 4579999999999999999999999999 9999999999999999999999876
No 45
>cd05802 GlmM GlmM is a bacterial phosphoglucosamine mutase (PNGM) that belongs to the alpha-D-phosphohexomutase superfamily. It is required for the interconversion of glucosamine-6-phosphate and glucosamine-1-phosphate in the biosynthetic pathway of UDP-N-acetylglucosamine, an essential precursor to components of the cell envelope. In order to be active, GlmM must be phosphorylated, which can occur via autophosphorylation or by the Ser/Thr kinase StkP. GlmM functions in a classical ping-pong bi-bi mechanism with glucosamine-1,6-diphosphate as an intermediate. Other members of the alpha-D-phosphohexomutase superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=98.56 E-value=7.4e-08 Score=95.38 Aligned_cols=53 Identities=28% Similarity=0.512 Sum_probs=50.5
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++|+||||+|.+|++|++++++||++. |++|+|+|.++||+++|+++.+++.
T Consensus 37 ~~~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 89 (434)
T cd05802 37 RPKVLIGKDTRISGYMLESALAAGLTSA-GVDVLLLGVIPTPAVAYLTRKLRAD 89 (434)
T ss_pred CCeEEEEECCCCCHHHHHHHHHHHHHHC-CCcEEEEcccchHHHHHHHHHhCCC
Confidence 3579999999999999999999999999 9999999999999999999999876
No 46
>PRK14318 glmM phosphoglucosamine mutase; Provisional
Probab=98.56 E-value=7.4e-08 Score=95.81 Aligned_cols=53 Identities=30% Similarity=0.521 Sum_probs=50.6
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++|+||||+|.+|++|++++++||.+. |++|+++|.++||++||+++.+++.
T Consensus 44 ~~~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 96 (448)
T PRK14318 44 RPVAVVGRDPRASGEFLEAAVSAGLASA-GVDVLRVGVLPTPAVAYLTAALDAD 96 (448)
T ss_pred CCeEEEEeCCCcCHHHHHHHHHHHHHHC-CCEEEEecccCchHHHHHHHhcCCC
Confidence 4579999999999999999999999999 9999999999999999999999876
No 47
>PRK14320 glmM phosphoglucosamine mutase; Provisional
Probab=98.56 E-value=7.7e-08 Score=95.54 Aligned_cols=52 Identities=31% Similarity=0.487 Sum_probs=49.6
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+.|+||||+|.+|++|++++++||.+. |++|+|+|++|||+++|+++.+++.
T Consensus 42 ~~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~d~g~~pTP~~~~av~~~~~~ 93 (443)
T PRK14320 42 KFVIVGQDTRSSGGFLKFALVSGLNAA-GIDVLDLGVVPTPVVAFMTVKHRAA 93 (443)
T ss_pred CeEEEEECCCcCHHHHHHHHHHHHHHC-CCEEEEecccCchHHHHHHHHcCCc
Confidence 469999999999999999999999999 9999999999999999999988776
No 48
>PRK14319 glmM phosphoglucosamine mutase; Provisional
Probab=98.44 E-value=2e-07 Score=92.28 Aligned_cols=51 Identities=33% Similarity=0.550 Sum_probs=47.1
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhcc
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNK 178 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~ 178 (325)
++|+||||+|.+|++|++++++||++. |++|+|+|.++||+++|+++..+.
T Consensus 35 ~~V~Vg~D~R~ss~~l~~a~~~gL~s~-G~~V~d~g~~pTP~~~~~~~~~~~ 85 (430)
T PRK14319 35 KKIFIAKDTRASGDMLEAALVAGITSA-GADVYRCGVLPTPALALITKLEDA 85 (430)
T ss_pred CcEEEEeCCCCChHHHHHHHHHHHHHC-CCeEEEeCCcCcHHHHHHHhccCc
Confidence 369999999999999999999999999 999999999999999998876543
No 49
>PRK14317 glmM phosphoglucosamine mutase; Provisional
Probab=98.44 E-value=2.4e-07 Score=92.59 Aligned_cols=53 Identities=26% Similarity=0.496 Sum_probs=50.3
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++|+||||+|.+|++|++++++||++. |++|+++|.++||+++|+++.+++.
T Consensus 55 ~~~VvVG~D~R~ss~~l~~a~~~gL~s~-Gv~V~~~g~~pTP~~~~av~~~~~~ 107 (465)
T PRK14317 55 EGPVLIGQDSRNSSDMLAMALAAGLTAA-GREVWHLGLCPTPAVAYLTRKSEAI 107 (465)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHC-CCeEEEecccCcHHHHHHHHhcCCC
Confidence 3569999999999999999999999999 9999999999999999999998876
No 50
>cd05803 PGM_like4 This PGM-like (phosphoglucomutase-like) domain is located C-terminal to a mannose-1-phosphate guanyltransferase domain in a protein of unknown function that is found in both prokaryotes and eukaryotes. This domain belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=98.42 E-value=3.1e-07 Score=91.30 Aligned_cols=53 Identities=34% Similarity=0.534 Sum_probs=50.6
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
++.|+||+|+|.+|+++++++++||++. |++|+++|.++||+++|+++.+++.
T Consensus 37 ~~~Vvvg~D~R~~s~~l~~a~~~gL~~~-G~~V~~~g~~pTP~~~~a~~~~~~~ 89 (445)
T cd05803 37 GGKIVVGRDGRPSGPMLEKIVIGALLAC-GCDVIDLGIAPTPTVQVLVRQSQAS 89 (445)
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHC-CCeEEEeCCCCchHHHHHHHHhCCC
Confidence 4579999999999999999999999999 9999999999999999999999876
No 51
>PRK14322 glmM phosphoglucosamine mutase; Provisional
Probab=98.42 E-value=2.2e-07 Score=91.96 Aligned_cols=49 Identities=35% Similarity=0.593 Sum_probs=47.2
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhc
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARN 177 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n 177 (325)
.|+||||+|.+|++|++++++||.+. |++|+|+|.+|||+++|+++.++
T Consensus 39 ~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~ 87 (429)
T PRK14322 39 KVIVGKDTRVSGDSLEAAISAGLTSM-GVDVLLCGILPTPAVALLTRITR 87 (429)
T ss_pred cEEEEeCCCcCHHHHHHHHHHHHHHC-CCeEEEecCcCHHHHHHHHhccC
Confidence 49999999999999999999999999 99999999999999999999875
No 52
>cd05805 MPG1_transferase GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional
Probab=98.41 E-value=6.4e-07 Score=88.89 Aligned_cols=53 Identities=21% Similarity=0.358 Sum_probs=50.5
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 34 ~~~VvVG~D~R~ss~~~~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 86 (441)
T cd05805 34 GSTVTVSRDASRASRMLKRALISGLLST-GVNVRDLGALPLPVARYAIRFLGAS 86 (441)
T ss_pred CCEEEEEcCCChhHHHHHHHHHHHHHhC-CCeEEecCCcCchHHHHHHHhcCCC
Confidence 4579999999999999999999999999 9999999999999999999998876
No 53
>cd05800 PGM_like2 This PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily and is found in both archaea and bacteria. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four structural domains (subdomains) with a centrally located active site formed by four loops, one from each subdomain. All four subdomains are included in this alignment model.
Probab=98.39 E-value=3.8e-07 Score=91.04 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=50.3
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeec-ceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDM-GILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dl-g~~tTP~l~f~v~~~n~~ 179 (325)
++.|+||||+|.+|+++++++++||++. |++|+++ |.++||+++|+++.+++.
T Consensus 39 ~~~Vvvg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~~g~~pTP~~~~a~~~~~~~ 92 (461)
T cd05800 39 GRGVVVGYDTRFLSEEFARAVAEVLAAN-GIDVYLSDRPVPTPAVSWAVKKLGAA 92 (461)
T ss_pred CCeEEEEeCCCcCcHHHHHHHHHHHHHC-CCEEEEcCCCCCchHHHHHHHHhCCC
Confidence 4579999999999999999999999999 9999999 799999999999999886
No 54
>PRK09542 manB phosphomannomutase/phosphoglucomutase; Reviewed
Probab=98.39 E-value=2.5e-07 Score=91.90 Aligned_cols=53 Identities=25% Similarity=0.357 Sum_probs=50.1
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
++.|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 35 ~~~VvVg~D~R~~s~~l~~a~~~gL~s~-G~~V~~lg~~pTP~~~~av~~~~~~ 87 (445)
T PRK09542 35 ATTVVIGHDMRDSSPELAAAFAEGVTAQ-GLDVVRIGLASTDQLYFASGLLDCP 87 (445)
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHHC-CCEEEEeCCCCCHHHHheecccCCC
Confidence 3479999999999999999999999999 9999999999999999999998875
No 55
>PRK10887 glmM phosphoglucosamine mutase; Provisional
Probab=98.38 E-value=3.8e-07 Score=90.56 Aligned_cols=52 Identities=31% Similarity=0.486 Sum_probs=49.8
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
++|+||||+|.+|+++++++++||++. |++|+++|.++||+++|+++.+++.
T Consensus 40 ~~VvVg~D~R~ss~~l~~a~~~gL~s~-Gv~V~~~g~~pTP~~~~a~~~~~~~ 91 (443)
T PRK10887 40 PKVLIGKDTRISGYMLESALEAGLAAA-GVDVLLTGPMPTPAVAYLTRTLRAE 91 (443)
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHHC-CCeEEEECCcChHHHHHHHHHcCCC
Confidence 469999999999999999999999999 9999999999999999999998876
No 56
>PRK14324 glmM phosphoglucosamine mutase; Provisional
Probab=98.38 E-value=3.8e-07 Score=90.72 Aligned_cols=52 Identities=29% Similarity=0.491 Sum_probs=49.6
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
.+|+||||+|.+|++|++++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 40 ~~V~Vg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~a~~~~~~~ 91 (446)
T PRK14324 40 NKILVGKDTRRSGYMIENALVSGLTSV-GYNVIQIGPMPTPAIAFLTEDMRCD 91 (446)
T ss_pred CeEEEEeCCCcCHHHHHHHHHHHHHHC-CCeEEEecCccHHHHHHHHhhcCCc
Confidence 369999999999999999999999999 9999999999999999999988876
No 57
>cd03087 PGM_like1 This archaeal PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=98.38 E-value=3.8e-07 Score=90.44 Aligned_cols=51 Identities=37% Similarity=0.622 Sum_probs=49.0
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+.|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.++ .
T Consensus 34 ~~VvVg~D~R~~s~~l~~a~~~gL~~~-G~~V~~~g~~~tP~~~~~v~~~~-~ 84 (439)
T cd03087 34 GTVVVGRDTRTSGPMLKNAVIAGLLSA-GCDVIDIGIVPTPALQYAVRKLG-D 84 (439)
T ss_pred CeEEEEeCCCCCHHHHHHHHHHHHHHC-CCeEEEcCccChHHHHHHHHhcC-C
Confidence 479999999999999999999999999 99999999999999999999987 5
No 58
>PRK14315 glmM phosphoglucosamine mutase; Provisional
Probab=98.38 E-value=4.1e-07 Score=90.48 Aligned_cols=52 Identities=27% Similarity=0.440 Sum_probs=49.7
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
.+|+||||+|.+|+++++++++||++. |++|+++|.++||+++|+++.+++.
T Consensus 43 ~~VvVg~D~R~ss~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~a~~~~~~~ 94 (448)
T PRK14315 43 HRVVIGKDTRLSGYMIENALVAGFTSV-GMDVLLLGPIPTPAVAMLTRSMRAD 94 (448)
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHHC-CCeEEEeCCcccHHHHHHHHhcCCC
Confidence 379999999999999999999999999 9999999999999999999998876
No 59
>PRK14314 glmM phosphoglucosamine mutase; Provisional
Probab=98.37 E-value=8.6e-07 Score=88.26 Aligned_cols=52 Identities=27% Similarity=0.457 Sum_probs=49.9
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
.+|+||||+|.+|+++++++++||++. |++|+++|.++||+++|+++.+++.
T Consensus 43 ~~VvVg~D~R~~s~~l~~a~~~gL~s~-Gv~V~~~g~~ptP~~~~a~~~~~~~ 94 (450)
T PRK14314 43 HRVVIGKDTRLSGYMFENALIAGLCSM-GVDVLLVGPLPTPGIAFITRSMRAD 94 (450)
T ss_pred CcEEEEeCCCcChHHHHHHHHHHHHHC-CCeEEEecccCCHHHHHHHHhcCCC
Confidence 379999999999999999999999999 9999999999999999999999876
No 60
>TIGR01455 glmM phosphoglucosamine mutase. This model describes GlmM, phosphoglucosamine mutase, also designated in MrsA and YhbF E. coli, UreC in Helicobacter pylori, and femR315 or FemD in Staphlococcus aureus. It converts glucosamine-6-phosphate to glucosamine-1-phosphate as part of the pathway toward UDP-N-acetylglucosamine for peptidoglycan and lipopolysaccharides.
Probab=98.36 E-value=4.6e-07 Score=90.00 Aligned_cols=51 Identities=29% Similarity=0.496 Sum_probs=49.5
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
.|+||||+|.+|+++++++++||++. |++|+++|.++||+++|+++.+++.
T Consensus 40 ~V~Vg~D~R~~s~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 90 (443)
T TIGR01455 40 RVVIGKDTRLSGYMLENALAAGLNSA-GVDVLLLGPLPTPAVAYLTRTLRAD 90 (443)
T ss_pred eEEEEeCCCcChHHHHHHHHHHHHHC-CCeEEEeCCcCcHHHHHHHHhcCCC
Confidence 69999999999999999999999999 9999999999999999999999876
No 61
>cd03089 PMM_PGM The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other membe
Probab=98.35 E-value=4.9e-07 Score=89.79 Aligned_cols=52 Identities=29% Similarity=0.450 Sum_probs=49.9
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+.|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 37 ~~VvVg~D~R~~s~~~~~a~~~gL~s~-G~~V~~~g~~pTP~~~~~v~~~~a~ 88 (443)
T cd03089 37 KKVVVGRDGRLSSPELAAALIEGLLAA-GCDVIDIGLVPTPVLYFATFHLDAD 88 (443)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHHc-CCcEEEeCCcchHHHHHHHhccCCC
Confidence 479999999999999999999999999 9999999999999999999998876
No 62
>PRK15414 phosphomannomutase CpsG; Provisional
Probab=98.34 E-value=4.7e-07 Score=90.27 Aligned_cols=51 Identities=25% Similarity=0.361 Sum_probs=49.4
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 40 ~VvVg~D~R~ss~~l~~a~a~gL~s~-Gi~V~~~g~~pTP~~~~av~~~~~~ 90 (456)
T PRK15414 40 TIVLGGDVRLTSETLKLALAKGLQDA-GVDVLDIGMSGTEEIYFATFHLGVD 90 (456)
T ss_pred eEEEEECCCCChHHHHHHHHHHHHHC-CCeEEEeCCcChHHHHHhhhccCCC
Confidence 69999999999999999999999999 9999999999999999999998876
No 63
>PRK14321 glmM phosphoglucosamine mutase; Provisional
Probab=98.29 E-value=8.3e-07 Score=88.34 Aligned_cols=51 Identities=29% Similarity=0.502 Sum_probs=49.4
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 38 ~VvVg~D~R~~s~~l~~a~~~gL~s~-G~~V~~~g~~pTP~~~~av~~~~~~ 88 (449)
T PRK14321 38 KVVVGKDTRTSSEMLKNALISGLLST-GVDVIDIGLAPTPLTGFAIKLYNAD 88 (449)
T ss_pred cEEEEeCCCCChHHHHHHHHHHHHHC-CCeEEEeCCcCCcHHHHHHHhcCCC
Confidence 69999999999999999999999999 9999999999999999999998876
No 64
>cd03088 ManB ManB is a bacterial phosphomannomutase (PMM) that catalyzes the conversion of mannose 6-phosphate to mannose-1-phosphate in the second of three steps in the GDP-mannose pathway, in which GDP-D-mannose is synthesized from fructose-6-phosphate. In Mycobacterium tuberculosis, the causative agent of tuberculosis, PMM is involved in the biosynthesis of mannosylated lipoglycans that participate in the association of mycobacteria with host macrophage phagocytic receptors. ManB belongs to the the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrall
Probab=98.25 E-value=1.2e-06 Score=87.40 Aligned_cols=52 Identities=27% Similarity=0.413 Sum_probs=49.0
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
+.|+||||+|.+|+++++++++||.+. |++|+++|.++||+++|+++.++..
T Consensus 37 ~~VvVG~D~R~~s~~l~~a~~~gL~~~-Gv~V~~~g~~pTP~~~~a~~~~~~g 88 (459)
T cd03088 37 DTVAVGRDLRPSSPRIAAACAAALRDA-GFRVVDCGAVPTPALALYAMKRGAP 88 (459)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHC-CCEEEEeCCCCCHHHHHHHHHcCCc
Confidence 469999999999999999999999999 9999999999999999999988644
No 65
>COG1109 {ManB} Phosphomannomutase [Carbohydrate transport and metabolism]
Probab=98.21 E-value=1.6e-06 Score=86.74 Aligned_cols=52 Identities=31% Similarity=0.546 Sum_probs=50.3
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~ 179 (325)
++|+||||+|.+|++++.++++||.+. |++|+++|.++||+++|+++.+++.
T Consensus 45 ~~VvVG~D~R~ss~~~~~a~~~gl~~~-G~~v~~~g~~pTP~~~f~~~~~~~~ 96 (464)
T COG1109 45 PKVVVGRDTRLSSEMLAAALAAGLTSA-GIDVYDLGLVPTPAVAFATRKLGAD 96 (464)
T ss_pred CeEEEEecCCCCHHHHHHHHHHHHHHC-CCeEEEeCCCCCHHHHHHHHhcCCC
Confidence 589999999999999999999999999 9999999999999999999999986
No 66
>cd05799 PGM2 This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/ph
Probab=98.18 E-value=2.1e-06 Score=86.27 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=50.3
Q ss_pred CceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecc-eecchhHHHHHHHhccC
Q 020474 126 PAEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMG-ILTTPQLHWMVRARNKG 179 (325)
Q Consensus 126 ~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg-~~tTP~l~f~v~~~n~~ 179 (325)
++.|+||||+|.+|+++++++++||.+. |++|+++| .++||+++|+++.+++.
T Consensus 45 ~~~V~Vg~D~R~~s~~~~~a~~~gL~s~-Gi~V~~~g~~~ptP~~~~~i~~~~~~ 98 (487)
T cd05799 45 NRGVVIGYDSRHNSREFAELTAAVLAAN-GIKVYLFDDLRPTPLLSFAVRHLGAD 98 (487)
T ss_pred CCeEEEEcCCCCChHHHHHHHHHHHHHC-CCEEEEeCCCCCCcHHHHHHHHhCCC
Confidence 3579999999999999999999999999 99999999 99999999999998876
No 67
>PLN02371 phosphoglucosamine mutase family protein
Probab=98.11 E-value=3.6e-06 Score=86.39 Aligned_cols=52 Identities=31% Similarity=0.475 Sum_probs=48.4
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHh--ccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRAR--NKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~--n~~ 179 (325)
++|+||||+|.+|++|++++++||.+. |++|+++|.++||+++|+++.+ ++.
T Consensus 116 ~~VvVG~D~R~sS~~l~~a~a~gL~s~-Gi~V~~~g~~pTP~~~~av~~~~~~~~ 169 (583)
T PLN02371 116 LRVSVGRDPRISGPRLADAVFAGLASA-GLDVVDMGLATTPAMFMSTLTEREDYD 169 (583)
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHC-CCEEEEecccCchHHHHHHHhccCCCc
Confidence 479999999999999999999999999 9999999999999999999966 554
No 68
>PRK07564 phosphoglucomutase; Validated
Probab=98.07 E-value=8.3e-06 Score=83.11 Aligned_cols=49 Identities=22% Similarity=0.302 Sum_probs=46.9
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCcee---ecceecchhHHHHHHHhc
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAH---DMGILTTPQLHWMVRARN 177 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~---dlg~~tTP~l~f~v~~~n 177 (325)
+|+||||+|.+|+++++++++||.+. |++|+ |+|.++||+++|+++.++
T Consensus 78 ~VvVG~D~R~~S~~~a~a~a~gL~s~-Gi~V~~~~~~g~~pTP~~~~av~~~~ 129 (543)
T PRK07564 78 PLFVGGDTHALSEPAIQSALEVLAAN-GVGVVIVGRGGYTPTPAVSHAILKYN 129 (543)
T ss_pred eEEEEecCCcCCHHHHHHHHHHHHHC-CCEEEEeCCCCcCCchHHHHHHHHhC
Confidence 59999999999999999999999999 99999 559999999999999998
No 69
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific. This enzyme interconverts alpha-D-glucose-1-P and alpha-D-glucose-6-P.
Probab=98.02 E-value=6e-06 Score=84.14 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=46.6
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceee---cceecchhHHHHHHHhc
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHD---MGILTTPQLHWMVRARN 177 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~d---lg~~tTP~l~f~v~~~n 177 (325)
.|+||||+|.+|+++++++++||.+. |++|++ +|.++||+++|+++.++
T Consensus 79 ~VvVG~D~R~sS~~~~~a~a~gL~s~-Gi~V~~~~~~G~~pTP~~~~av~~~~ 130 (543)
T TIGR01132 79 PLYIGKDTHALSEPAFISVLEVLAAN-GVEVIVQENNGFTPTPAVSHAILTHN 130 (543)
T ss_pred cEEEEeCCCcCCHHHHHHHHHHHHHC-CCEEEEeCCCCcCCchHHHHHHHHhc
Confidence 49999999999999999999999999 999998 58999999999999887
No 70
>PTZ00150 phosphoglucomutase-2-like protein; Provisional
Probab=98.00 E-value=7.7e-06 Score=84.03 Aligned_cols=52 Identities=19% Similarity=0.210 Sum_probs=49.5
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecc-eecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMG-ILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg-~~tTP~l~f~v~~~n~~ 179 (325)
+.|+||||+|.+|+++++++++||.+. |++|+++| .++||+++|+++.+++.
T Consensus 90 ~~VvVg~D~R~~S~~fa~~~a~~L~a~-Gi~V~~~g~~~pTP~lsfav~~~~a~ 142 (584)
T PTZ00150 90 RGVVIGYDGRYHSRRFAEITASVFLSK-GFKVYLFGQTVPTPFVPYAVRKLKCL 142 (584)
T ss_pred CcEEEEeCCCCCcHHHHHHHHHHHHHC-CCEEEEeCCCCCcHHHHHHHHHhCCC
Confidence 369999999999999999999999999 99999998 99999999999999877
No 71
>cd03085 PGM1 Phosphoglucomutase 1 (PGM1) catalyzes the bidirectional interconversion of glucose-1-phosphate (G-1-P) and glucose-6-phosphate (G-6-P) via a glucose 1,6-diphosphate intermediate, an important metabolic step in prokaryotes and eukaryotes. In one direction, G-1-P produced from sucrose catabolism is converted to G-6-P, the first intermediate in glycolysis. In the other direction, conversion of G-6-P to G-1-P generates a substrate for synthesis of UDP-glucose which is required for synthesis of a variety of cellular constituents including cell wall polymers and glycoproteins. The PGM1 family also includes a non-enzymatic PGM-related protein (PGM-RP) thought to play a structural role in eukaryotes, as well as pp63/parafusin, a phosphoglycoprotein that plays an important role in calcium-regulated exocytosis in ciliated protozoans. PGM1 belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl t
Probab=97.97 E-value=8.7e-06 Score=82.97 Aligned_cols=51 Identities=22% Similarity=0.326 Sum_probs=48.8
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeec---ceecchhHHHHHHHhccC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDM---GILTTPQLHWMVRARNKG 179 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dl---g~~tTP~l~f~v~~~n~~ 179 (325)
.|+||||+|.+|+++.++++++|.+. |++|+++ |.++||+++|+++.+++.
T Consensus 51 ~VvVG~D~R~~S~~~a~~~a~~L~~~-G~~V~~~~~~G~~pTP~l~fav~~~~a~ 104 (548)
T cd03085 51 TLVVGGDGRYYNKEAIQIIIKIAAAN-GVGKVVVGQNGLLSTPAVSAVIRKRKAT 104 (548)
T ss_pred eEEEEECCCcChHHHHHHHHHHHHHC-CCeEEEeCCCCccCchHHHHHHHhcCCC
Confidence 59999999999999999999999999 9999999 899999999999988776
No 72
>PLN02307 phosphoglucomutase
Probab=97.79 E-value=3.1e-05 Score=79.35 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=48.4
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeec---ceecchhHHHHHHHh---ccC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDM---GILTTPQLHWMVRAR---NKG 179 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dl---g~~tTP~l~f~v~~~---n~~ 179 (325)
.|+||+|+|.+|+++.++++++|.+. |++|+++ |+++||++.|+++.+ ++.
T Consensus 63 ~VvVG~D~R~~S~~fa~~~a~~L~a~-Gi~V~~~~~~G~~PTP~vsfav~~~~~~~a~ 119 (579)
T PLN02307 63 TLVLGGDGRYFNKEAIQIIIKIAAAN-GVRRVWVGQNGLLSTPAVSAVIRERDGSKAN 119 (579)
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHHC-CCEEEEeCCCCccCchHHHHHHHHhcccCCC
Confidence 59999999999999999999999999 9999999 799999999999998 665
No 73
>cd05801 PGM_like3 This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.
Probab=97.70 E-value=4.3e-05 Score=77.55 Aligned_cols=50 Identities=24% Similarity=0.351 Sum_probs=44.0
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCcee---ecceecchhHHHHHHHhcc
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAH---DMGILTTPQLHWMVRARNK 178 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~---dlg~~tTP~l~f~v~~~n~ 178 (325)
.|+||||+|..|.++++++++||.+. |++|+ |+|.++||+++|+++.+++
T Consensus 61 ~VvVg~D~R~~S~~~~~~~~~gL~s~-Gi~V~~~~~~g~~pTP~~~~av~~~~~ 113 (522)
T cd05801 61 PLFLGKDTHALSEPAFISALEVLAAN-GVEVIIQQNDGYTPTPVISHAILTYNR 113 (522)
T ss_pred eEEEEeCCCcCCHHHHHHHHHHHHHC-CCEEEEeCCCCCCCchHHHHHHHHhcc
Confidence 59999999986666666666999999 99999 6899999999999998875
No 74
>KOG1220 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=94.95 E-value=0.035 Score=55.99 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=49.2
Q ss_pred ceEEeccCCCCChHHHHHHHHHHHHhhcCCceeecc-eecchhHHHHHHHhccC
Q 020474 127 AEILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMG-ILTTPQLHWMVRARNKG 179 (325)
Q Consensus 127 ~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg-~~tTP~l~f~v~~~n~~ 179 (325)
-.|+||+|.|-+|+.+.+++..++..- |..|+.|+ +++||.+-|+|-.+.++
T Consensus 103 ~giviG~D~R~~S~~fA~l~a~vf~~~-g~~v~lf~~~v~TP~vpfav~~l~~d 155 (607)
T KOG1220|consen 103 LGIVIGHDGRYNSKRFAELVAAVFLLN-GFKVYLFSELVPTPFVPFAVLTLGAD 155 (607)
T ss_pred ceEEEecCCccchHHHHHHHHHHHHhC-CceEEEeccccCCCcchhHHHHhccC
Confidence 379999999999999999999999888 99999999 99999999999998888
No 75
>COG0033 Pgm Phosphoglucomutase [Carbohydrate transport and metabolism]
Probab=88.89 E-value=1.5 Score=43.36 Aligned_cols=67 Identities=18% Similarity=0.279 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCCceEEeccCCCCChHHHHHHHHHHHHhhcCCcee---ecceecchhHHHHHHHhccC
Q 020474 106 LVSLIEEFVKKEKIPFNGKHPAEILLGRDTRPSGESLLEAAKQGISAVVGAVAH---DMGILTTPQLHWMVRARNKG 179 (325)
Q Consensus 106 ~~~~ie~~~~~~~~~~~~~~~~~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~---dlg~~tTP~l~f~v~~~n~~ 179 (325)
+++.|.+...+.. .+..++||+|+|--++...+.+++-+.+- |++++ +-|+.+||-..++++.+|..
T Consensus 40 ~~Qai~d~~~~~~------~~~~L~vG~D~~~~se~a~~~~lev~aAN-gv~~iv~~~~g~~~TPAaSh~I~t~n~k 109 (524)
T COG0033 40 FIQAIADYRAEGG------IGGPLVVGGDTHALSEPAIQSALEVLAAN-GVEVIVQGQGGFTPTPAASHAILTHNGK 109 (524)
T ss_pred HHHHHHHHHhccC------CCCceEECCCcccccHHHHHHHHHHHHhc-CceEEEecCCCccCchHHHHHHHhhccc
Confidence 3446666654432 45578999999988887666666655544 65544 67899999999999988654
No 76
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=71.47 E-value=31 Score=28.98 Aligned_cols=34 Identities=29% Similarity=0.312 Sum_probs=29.3
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeeccee
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGIL 164 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~ 164 (325)
+|.||+|.. +-.||+.+++-|.+. |.+|.|+|.-
T Consensus 1 kI~igsDha--G~~lK~~l~~~L~~~-g~eV~D~G~~ 34 (143)
T TIGR01120 1 KIAIGSDHA--GFILKEEIKAFLVER-GVKVIDKGTW 34 (143)
T ss_pred CEEEEeCcc--hHHHHHHHHHHHHHC-CCEEEEeCCC
Confidence 378899864 789999999999999 9999999854
No 77
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=70.26 E-value=34 Score=29.67 Aligned_cols=34 Identities=21% Similarity=0.135 Sum_probs=29.6
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeeccee
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGIL 164 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~ 164 (325)
+|.||+|.. +-.||+.+++-|.+. |.+|.|+|.-
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~-G~eV~D~G~~ 35 (171)
T PRK12615 2 KIAIGCDHI--VTNEKMAVSDFLKSK-GYDVIDCGTY 35 (171)
T ss_pred EEEEEeCch--hHHHHHHHHHHHHHC-CCEEEEcCCC
Confidence 488999865 789999999999999 9999999854
No 78
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=69.06 E-value=40 Score=28.60 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=29.2
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHh--hcCCceeecce
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISA--VVGAVAHDMGI 163 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s--~~G~~v~dlg~ 163 (325)
+|.||+|.. +-.||+.++.-|.. . |.+|+|+|.
T Consensus 4 kI~igsDha--G~~lK~~l~~~L~~~~~-g~eV~D~G~ 38 (151)
T PTZ00215 4 KVAIGSDHA--GFDLKNEIIDYIKNKGK-EYKIEDMGT 38 (151)
T ss_pred EEEEEeCCc--hHHHHHHHHHHHHhccC-CCEEEEcCC
Confidence 589999965 78999999999999 8 999999974
No 79
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=68.94 E-value=40 Score=29.27 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=30.0
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceec
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILT 165 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~t 165 (325)
+|.||.|.. +-.||+.+++-|... |.+|.|+|.-+
T Consensus 2 kI~IgsDha--G~~lK~~l~~~L~~~-G~eV~D~G~~~ 36 (171)
T PRK08622 2 KIAIGCDHI--VTDEKMAVSDYLKSK-GHEVIDVGTYD 36 (171)
T ss_pred EEEEEeCcc--hHHHHHHHHHHHHHC-CCEEEEcCCCC
Confidence 488999864 788999999999999 99999998543
No 80
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=68.57 E-value=40 Score=29.26 Aligned_cols=34 Identities=18% Similarity=0.198 Sum_probs=29.6
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeeccee
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGIL 164 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~ 164 (325)
+|.||+|.. +-.||+.+++-|.+. |.+|.|+|.-
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~-G~eV~D~G~~ 35 (171)
T TIGR01119 2 KIAIGCDHI--VTDVKMEVSEFLKSK-GYEVLDVGTY 35 (171)
T ss_pred EEEEEeCCc--hHHHHHHHHHHHHHC-CCEEEEeCCC
Confidence 488999864 789999999999999 9999999853
No 81
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=67.67 E-value=29 Score=29.07 Aligned_cols=73 Identities=23% Similarity=0.251 Sum_probs=47.2
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGT 207 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~ 207 (325)
+|.||.|. ++-.||+.+.+-|.+. |.+|.|+|.-.+- ...|.+.-...-....+..
T Consensus 1 KI~igsDh--~g~~lK~~i~~~L~~~-g~eV~D~G~~~~~----------------~~dy~~~a~~va~~V~~~~----- 56 (140)
T PF02502_consen 1 KIAIGSDH--AGFELKEAIKEYLEEK-GYEVIDFGTYSED----------------SVDYPDFAEKVAEAVASGE----- 56 (140)
T ss_dssp EEEEEE-G--GGHHHHHHHHHHHHHT-TEEEEEESESSTS----------------T--HHHHHHHHHHHHHTTS-----
T ss_pred CEEEEeCH--HHHHHHHHHHHHHHHC-CCEEEEeCCCCCC----------------CCCHHHHHHHHHHHHHccc-----
Confidence 57899985 4788999999999999 9999998765422 2345554333322221111
Q ss_pred CCCCCCeEEEECCCCChHHHH
Q 020474 208 SNETEDKLIVDGANGVGGEKL 228 (325)
Q Consensus 208 i~~~~~kIvvD~~nG~g~~~~ 228 (325)
--+-++=|..|.|..++
T Consensus 57 ----~d~GIliCgtGiG~~ia 73 (140)
T PF02502_consen 57 ----ADRGILICGTGIGMSIA 73 (140)
T ss_dssp ----SSEEEEEESSSHHHHHH
T ss_pred ----CCeEEEEcCCChhhhhH
Confidence 23678888999887655
No 82
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=66.57 E-value=38 Score=28.48 Aligned_cols=72 Identities=19% Similarity=0.196 Sum_probs=46.4
Q ss_pred EEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCCC
Q 020474 129 ILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGTS 208 (325)
Q Consensus 129 V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~i 208 (325)
|.||+|.. +-.||+.+.+-|.+. |.+|.|+|.-+.+ +.....|-..+.+.+.. .
T Consensus 1 I~igsDha--G~~lK~~l~~~L~~~-g~eV~D~G~~~~~-------------~~dYpd~a~~va~~V~~---g------- 54 (144)
T TIGR00689 1 IAIGSDHA--GLELKSEIIEHLKQK-GHEVIDCGTLYDE-------------RVDYPDYAKLVADKVVA---G------- 54 (144)
T ss_pred CEEeeCcc--hHHHHHHHHHHHHHC-CCEEEEcCCCCCC-------------CCChHHHHHHHHHHHHc---C-------
Confidence 46788854 788999999999999 9999999865433 21222333333333321 1
Q ss_pred CCCCCeEEEECCCCChHHHH
Q 020474 209 NETEDKLIVDGANGVGGEKL 228 (325)
Q Consensus 209 ~~~~~kIvvD~~nG~g~~~~ 228 (325)
+--+-++=|..|.|..+.
T Consensus 55 --~~~~GIliCGtGiG~sia 72 (144)
T TIGR00689 55 --EVSLGILICGTGIGMSIA 72 (144)
T ss_pred --CCceEEEEcCCcHHHHHH
Confidence 023567778888886554
No 83
>COG0698 RpiB Ribose 5-phosphate isomerase RpiB [Carbohydrate transport and metabolism]
Probab=58.68 E-value=70 Score=27.16 Aligned_cols=74 Identities=22% Similarity=0.230 Sum_probs=50.2
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecceecchhHHHHHHHhccCCCCChHHHHHHHHHHHHhhhccCCCCCC
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTPQLHWMVRARNKGLKATESDYFEQLLSSFRCLMNLIPDRGT 207 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP~l~f~v~~~n~~g~~~~~~Y~~~l~~~~~~~~~~~~~~~~ 207 (325)
+|.||+|. ++..||+.+..-|.+. |.+|+|+|..++-. +.....|-..+.+.+.. ..
T Consensus 2 kIaig~Dh--ag~~lK~~I~~~Lk~~-g~~v~D~G~~~~~~------------~~dyp~~a~~va~~v~~---~~----- 58 (151)
T COG0698 2 KIAIGSDH--AGYELKEIIIDHLKSK-GYEVIDFGTYTDEG------------SVDYPDYAKKVAEAVLN---GE----- 58 (151)
T ss_pred cEEEEcCc--ccHHHHHHHHHHHHHC-CCEEEeccccCCCC------------CcchHHHHHHHHHHHHc---CC-----
Confidence 47889985 4788999999999999 99999987765441 12334455555555432 11
Q ss_pred CCCCCCeEEEECCCCChHHHH
Q 020474 208 SNETEDKLIVDGANGVGGEKL 228 (325)
Q Consensus 208 i~~~~~kIvvD~~nG~g~~~~ 228 (325)
.-.-++=|.-|+|..+.
T Consensus 59 ----~d~GIliCGTGiG~~ia 75 (151)
T COG0698 59 ----ADLGILICGTGIGMSIA 75 (151)
T ss_pred ----CCeeEEEecCChhHHHH
Confidence 23567778888887554
No 84
>KOG2537 consensus Phosphoglucomutase/phosphomannomutase [Carbohydrate transport and metabolism]
Probab=57.51 E-value=3.7 Score=41.15 Aligned_cols=73 Identities=8% Similarity=-0.237 Sum_probs=61.0
Q ss_pred ceeecchhhhhhccccccceeeeeeehhhhhccc-CCceEEEEccCCCCCCCCceEEECCCCCcCCCCccchhhhhhcC
Q 020474 23 KLSYGTAGFRADASILQSTVYRVGILAALRSLKT-QCVIGLMITASHNKVTDNGVKIADPSGGMLSQDWEPFSDQLANA 100 (325)
Q Consensus 23 ~~~ygtagfr~~a~~L~~~~~~vgi~~~~~~~~~-~~~~GVmITASHNP~~~NGiKi~~~~G~~l~~~~e~~~~~i~n~ 100 (325)
.-.|++|++|..+...+.+|+.++....+.+-+. +-..+-|.++|||=.+||+-++...+ ++||.+..+|.|+
T Consensus 43 fr~g~~a~lRS~~l~gs~IGvMiTASHNp~~dNGvKivd~~g~ml~~~WE~~a~~~vNa~~-----~~l~~~l~kil~~ 116 (539)
T KOG2537|consen 43 FRMGVLAVLRSRKLGGSTIGVMITASHNPVEDNGVKIVDPSGEMLAASWEEYATQLVNASS-----QALERELAKILEK 116 (539)
T ss_pred hhhHHHHHHHHHHhcCCeeEEEEEeccCchhhcCccccCCccchhhhhhhhhhCceecCCc-----HHHHHHHHHHHhH
Confidence 3579999999999999999999998887777653 56668899999999999999998765 3388888887775
No 85
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=57.20 E-value=69 Score=27.06 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=29.2
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecce
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
+|.||+|.. +-.||+.+++-|... |.+|+|+|.
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~-g~eV~D~G~ 34 (148)
T PRK05571 2 KIAIGSDHA--GFELKEEIIEHLEEL-GHEVIDLGP 34 (148)
T ss_pred EEEEEeCCc--hHHHHHHHHHHHHHC-CCEEEEcCC
Confidence 588999864 789999999999999 999999985
No 86
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=55.40 E-value=93 Score=26.10 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=29.0
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecce
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
+|.||+|.. +-.||+.+++-|.+. |.+|+|+|.
T Consensus 2 kI~IgsDh~--G~~lK~~i~~~L~~~-G~eV~D~G~ 34 (141)
T TIGR01118 2 AIIIGSDLA--GKRLKDVIKNFLVDN-GFEVIDVTE 34 (141)
T ss_pred EEEEEeCcc--hHHHHHHHHHHHHHC-CCEEEEcCC
Confidence 478999864 789999999999998 999999985
No 87
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=51.80 E-value=98 Score=26.14 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=28.8
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecce
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
+|.||+|.. +-.||+.+..-|... |.+|.|+|.
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~-g~eV~D~G~ 34 (148)
T TIGR02133 2 RVVLGHDHA--GFEYKEALWLDLAAH-EPEVCDVGV 34 (148)
T ss_pred EEEEEeCch--hHHHHHHHHHHHHHC-CCEEEECCC
Confidence 478999865 788999999999998 999999985
No 88
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=51.45 E-value=1.2e+02 Score=25.47 Aligned_cols=33 Identities=30% Similarity=0.345 Sum_probs=29.0
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecce
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
+|.||+|.. +-.||+.+++-|.+. |.+|.|+|.
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~-g~eV~D~G~ 34 (141)
T PRK12613 2 AIILGADAH--GNALKELIKSFLQEE-GYDIIDVTD 34 (141)
T ss_pred EEEEEeCcc--hHHHHHHHHHHHHHC-CCEEEEcCC
Confidence 478999864 789999999999999 999999984
No 89
>PF12581 DUF3756: Protein of unknown function (DUF3756); InterPro: IPR022230 This domain family is found in viruses, and is approximately 40 amino acids in length. ; GO: 0003968 RNA-directed RNA polymerase activity, 0004197 cysteine-type endopeptidase activity, 0004252 serine-type endopeptidase activity, 0016817 hydrolase activity, acting on acid anhydrides, 0070008 serine-type exopeptidase activity
Probab=50.69 E-value=8.4 Score=24.48 Aligned_cols=24 Identities=29% Similarity=0.450 Sum_probs=20.5
Q ss_pred cchhhhhhccccccceeeeeeehh
Q 020474 27 GTAGFRADASILQSTVYRVGILAA 50 (325)
Q Consensus 27 gtagfr~~a~~L~~~~~~vgi~~~ 50 (325)
|-+|||..|.+.+...+.+|...+
T Consensus 1 ~~S~f~TnA~va~~a~i~iG~~~a 24 (41)
T PF12581_consen 1 LASGFRTNALVAPQAKISIGAYAA 24 (41)
T ss_pred CCccccccceeeccceecccceec
Confidence 468999999999999999988754
No 90
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=48.04 E-value=40 Score=28.32 Aligned_cols=33 Identities=24% Similarity=0.248 Sum_probs=29.0
Q ss_pred eEEeccCCCCChHHHHHHHHHHHHhhcCCceeecce
Q 020474 128 EILLGRDTRPSGESLLEAAKQGISAVVGAVAHDMGI 163 (325)
Q Consensus 128 ~V~vg~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~ 163 (325)
+|.||.|.. +-.||+.+++-|... |.+|.|+|.
T Consensus 2 kI~igsDha--G~~lK~~l~~~L~~~-G~eV~D~G~ 34 (142)
T PRK08621 2 AIIIGADKA--GFELKEVVKDYLEDN-KYEVVDVTE 34 (142)
T ss_pred EEEEEeCcc--hHHHHHHHHHHHHHC-CCEEEECCC
Confidence 488999854 788999999999999 999999976
No 91
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=37.86 E-value=77 Score=19.47 Aligned_cols=27 Identities=4% Similarity=0.049 Sum_probs=17.9
Q ss_pred ccCCCCCCCcEEEEecCcCceeeeeeec
Q 020474 266 VVPHGFGSNHAGISFSGVQVWMEMLIDL 293 (325)
Q Consensus 266 ~~v~~~~~ad~Gia~DgDaDRl~~~~d~ 293 (325)
++... ...+...++.+||.++...-+.
T Consensus 3 ~~t~~-~~~~~~p~~SpDGk~i~f~s~~ 29 (39)
T PF07676_consen 3 QLTNS-PGDDGSPAWSPDGKYIYFTSNR 29 (39)
T ss_dssp EES-S-SSSEEEEEE-TTSSEEEEEEEC
T ss_pred CcccC-CccccCEEEecCCCEEEEEecC
Confidence 44444 5667889999999999854443
No 92
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=30.39 E-value=1.3e+02 Score=25.13 Aligned_cols=64 Identities=6% Similarity=-0.004 Sum_probs=42.4
Q ss_pred eEEEECCCCChH--HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 214 KLIVDGANGVGG--EKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 214 kIvvD~~nG~g~--~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
||++-+.|+--. ..+.+.|+..| ++++-+-. .+ +.--+++-....+.|.+ ..+|.|+.++|-|=
T Consensus 2 kI~IgsDh~G~~lK~~i~~~L~~~G-~eV~D~G~-~~-----~~dYpd~a~~va~~V~~-~e~~~GIliCGtGi 67 (141)
T TIGR01118 2 AIIIGSDLAGKRLKDVIKNFLVDNG-FEVIDVTE-GD-----GQDFVDVTLAVASEVQK-DEQNLGIVIDAYGA 67 (141)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCC-CEEEEcCC-CC-----CCCcHHHHHHHHHHHHc-CCCceEEEEcCCCH
Confidence 688888886433 23566677778 66655432 11 11134556677777877 88999999999885
No 93
>PRK08621 galactose-6-phosphate isomerase subunit LacA; Reviewed
Probab=27.86 E-value=1.4e+02 Score=25.02 Aligned_cols=67 Identities=12% Similarity=-0.002 Sum_probs=43.2
Q ss_pred eEEEECCCCCh--HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCceee
Q 020474 214 KLIVDGANGVG--GEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWME 288 (325)
Q Consensus 214 kIvvD~~nG~g--~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~ 288 (325)
||++-+.|+-- ...+.+.|+..| .+|+-+-. +. +..-+++-....+.|.+ ..+|.|+.+.|-|==+.
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G-~eV~D~G~--~~----~~dYpd~a~~va~~V~~-~~~~~GIliCGTGiG~s 70 (142)
T PRK08621 2 AIIIGADKAGFELKEVVKDYLEDNK-YEVVDVTE--EG----AEDFVDSTLAVAKEVNK-SEDNLGIVIDAYGAGSF 70 (142)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCC-CEEEECCC--CC----CCCcHHHHHHHHHHHHc-CCCceEEEEcCCChhhh
Confidence 67887777643 334566677778 67665433 11 11234556677777877 88999999999875433
No 94
>PRK12613 galactose-6-phosphate isomerase subunit LacA; Provisional
Probab=27.62 E-value=1.5e+02 Score=24.88 Aligned_cols=63 Identities=11% Similarity=0.020 Sum_probs=42.1
Q ss_pred eEEEECCCCChH--HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 214 KLIVDGANGVGG--EKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 214 kIvvD~~nG~g~--~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
||++-+.|+--. ..+...|+..| .+++-+-. + +.--+++.....+.|.+ ..++.|+.++|-|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g-~eV~D~G~--~-----~~dypd~a~~va~~V~~-~e~~~GIliCGtGi 66 (141)
T PRK12613 2 AIILGADAHGNALKELIKSFLQEEG-YDIIDVTD--I-----NSDFIDNTLAVAKAVNE-AEGRLGIMVDAYGA 66 (141)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCC-CEEEEcCC--C-----CCChHHHHHHHHHHHHc-CCCceEEEEcCCCH
Confidence 677877776432 23566677778 66655443 1 11234556777778877 88999999999985
No 95
>PRK08622 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=27.52 E-value=1.5e+02 Score=25.68 Aligned_cols=65 Identities=11% Similarity=0.006 Sum_probs=40.9
Q ss_pred eEEEECCCCCh--HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcC
Q 020474 214 KLIVDGANGVG--GEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQ 284 (325)
Q Consensus 214 kIvvD~~nG~g--~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDa 284 (325)
||++-+.|.-- ...+.+.|+..| .+|+-+-...+. +.--+++-....+.|.+ ..+|.||.+.|-|
T Consensus 2 kI~IgsDhaG~~lK~~l~~~L~~~G-~eV~D~G~~~~e----~~dYpd~a~~va~~V~~-g~~d~GIliCGTG 68 (171)
T PRK08622 2 KIAIGCDHIVTDEKMAVSDYLKSKG-HEVIDVGTYDFT----RTHYPIFGKKVGEAVAS-GEADLGVCICGTG 68 (171)
T ss_pred EEEEEeCcchHHHHHHHHHHHHHCC-CEEEEcCCCCCC----CCChHHHHHHHHHHHHc-CCCcEEEEEcCCc
Confidence 67887777642 234556677778 666555432111 11134455667777777 7899999999987
No 96
>PRK05571 ribose-5-phosphate isomerase B; Provisional
Probab=26.70 E-value=1.6e+02 Score=24.80 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=41.7
Q ss_pred eEEEECCCCCh--HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 214 KLIVDGANGVG--GEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 214 kIvvD~~nG~g--~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
||++-+.|.-- ...+.+.|+..| .+|+-+-...... +..-+++-..+.+.|.+ ..+|.|+.++|-|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g-~eV~D~G~~~~~~---~~dYpd~a~~va~~V~~-g~~~~GIliCGtGi 70 (148)
T PRK05571 2 KIAIGSDHAGFELKEEIIEHLEELG-HEVIDLGPDSYDA---SVDYPDYAKKVAEAVVA-GEADRGILICGTGI 70 (148)
T ss_pred EEEEEeCCchHHHHHHHHHHHHHCC-CEEEEcCCCCCCC---CCCHHHHHHHHHHHHHc-CCCCEEEEEcCCcH
Confidence 67787777643 223566677778 6766554321100 11234455667777777 78999999999875
No 97
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=26.57 E-value=1.8e+02 Score=24.71 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=43.1
Q ss_pred CeEEEECCCCChHH--HHHHHHHH--cCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 213 DKLIVDGANGVGGE--KLEVIKEK--LNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 213 ~kIvvD~~nG~g~~--~~~~ll~~--Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
.||++-+.|+--.. .+.+.|+. .| ++|+-+-.. ... +.--+++-....+.|.+ ..++.|+.++|-|=
T Consensus 3 mkI~igsDhaG~~lK~~l~~~L~~~~~g-~eV~D~G~~--~~~--~~dYp~~a~~va~~V~~-~~~~~GIliCGtGi 73 (151)
T PTZ00215 3 KKVAIGSDHAGFDLKNEIIDYIKNKGKE-YKIEDMGTY--TAE--SVDYPDFAEKVCEEVLK-GEADTGILVCGSGI 73 (151)
T ss_pred cEEEEEeCCchHHHHHHHHHHHHhccCC-CEEEEcCCC--CCC--CCCHHHHHHHHHHHHhc-CCCcEEEEEcCCcH
Confidence 57999888865432 35666777 78 666554331 111 11124445667777777 78999999999874
No 98
>TIGR01120 rpiB ribose 5-phosphate isomerase B. Involved in the non-oxidative branch of the pentose phospate pathway.
Probab=26.25 E-value=1.6e+02 Score=24.77 Aligned_cols=66 Identities=11% Similarity=0.159 Sum_probs=40.2
Q ss_pred eEEEECCCCChH--HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 214 KLIVDGANGVGG--EKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 214 kIvvD~~nG~g~--~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
||++-+.|+--. ..+.+.|+..| .++.-+-...+. +.--+++-....+.|.+ ..+|.|+.++|-|=
T Consensus 1 kI~igsDhaG~~lK~~l~~~L~~~g-~eV~D~G~~~~~----~~dYpd~a~~va~~V~~-~~~~~GIliCGtGi 68 (143)
T TIGR01120 1 KIAIGSDHAGFILKEEIKAFLVERG-VKVIDKGTWSSE----RTDYPHYAKQVALAVAG-GEVDGGILICGTGI 68 (143)
T ss_pred CEEEEeCcchHHHHHHHHHHHHHCC-CEEEEeCCCCCC----CCCHHHHHHHHHHHHHC-CCCceEEEEcCCcH
Confidence 366666665332 23466677788 676655432111 11123445666777777 78999999999885
No 99
>PRK12615 galactose-6-phosphate isomerase subunit LacB; Reviewed
Probab=26.10 E-value=1.8e+02 Score=25.28 Aligned_cols=66 Identities=14% Similarity=0.081 Sum_probs=41.7
Q ss_pred eEEEECCCCChH--HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 214 KLIVDGANGVGG--EKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 214 kIvvD~~nG~g~--~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
||++-+.|+--. ..+.+.|+..| ++|+-+-.... .+.--+++-....+.|.+ ..+|.||.+.|-|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G-~eV~D~G~~~~----~~~dYpd~a~~va~~V~~-g~~d~GIliCGTGi 69 (171)
T PRK12615 2 KIAIGCDHIVTNEKMAVSDFLKSKG-YDVIDCGTYDH----TRTHYPIFGKKVGEAVVN-GQADLGVCICGTGV 69 (171)
T ss_pred EEEEEeCchhHHHHHHHHHHHHHCC-CEEEEcCCCCC----CCCChHHHHHHHHHHHHc-CCCCEEEEEcCCcH
Confidence 678888776432 23566677778 66655443211 111134455667777777 88999999999874
No 100
>PF02502 LacAB_rpiB: Ribose/Galactose Isomerase; InterPro: IPR003500 This entry represents the sugar isomerase enzymes ribose 5-phosphate isomerase B (rpiB), galactose isomerase subunit A (LacA) and galactose isomerase subunit B (LacB). Galactose-6-phosphate isomerase (5.3.1.26 from EC) is a heteromultimeric protein consisting of subunits LacA and LacB, and catalyses the conversion of D-galactose 6-phosphate to D-tagatose and 6-phosphate in the tagatose 6-phosphate pathway of lactose catabolism []. Galactose-6-phosphate isomerase is induced by galactose or lactose. This entry represents the LacB subunit. Ribose 5-phosphate isomerase (5.3.1.6 from EC) forms a homodimer and catalyses the interconversion of D-ribose 5-phosphate and D-ribulose 5-phosphate in the non-oxidative branch of the pentose phosphate pathway. This reaction permits the synthesis of ribose from other sugars, as well as the recycling of sugars from nucleotide breakdown. Two unrelated enzymes can catalyse this reaction: RpiA (found in most organisms) and RpiB (found in some bacteria and eukaryotes). RpiB is also involved in metabolism of the rare sugar, allose, in addition to ribose sugars. The structures of RpiA and RpiB are distinct, RpiB having a Rossmann-type alpha/beta/alpha sandwich topology [].; GO: 0005975 carbohydrate metabolic process; PDB: 3HEE_A 3HE8_A 3PH3_B 3PH4_B 3ONO_A 4EM8_B 3S5P_B 1O1X_A 2BES_D 2VVP_D ....
Probab=24.73 E-value=73 Score=26.61 Aligned_cols=68 Identities=18% Similarity=0.152 Sum_probs=40.3
Q ss_pred eEEEECCCCCh--HHHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCcee
Q 020474 214 KLIVDGANGVG--GEKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWM 287 (325)
Q Consensus 214 kIvvD~~nG~g--~~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl 287 (325)
||++-+.|+-. ...+.+.|+..| .+++-+...... +..-+++-..+.+.|.+ ..+|.|+.++|-|-=+
T Consensus 1 KI~igsDh~g~~lK~~i~~~L~~~g-~eV~D~G~~~~~----~~dy~~~a~~va~~V~~-~~~d~GIliCgtGiG~ 70 (140)
T PF02502_consen 1 KIAIGSDHAGFELKEAIKEYLEEKG-YEVIDFGTYSED----SVDYPDFAEKVAEAVAS-GEADRGILICGTGIGM 70 (140)
T ss_dssp EEEEEE-GGGHHHHHHHHHHHHHTT-EEEEEESESSTS----T--HHHHHHHHHHHHHT-TSSSEEEEEESSSHHH
T ss_pred CEEEEeCHHHHHHHHHHHHHHHHCC-CEEEEeCCCCCC----CCCHHHHHHHHHHHHHc-ccCCeEEEEcCCChhh
Confidence 56777766432 234566677778 566655543211 11123445667777777 8899999999987433
No 101
>TIGR02133 RPI_actino ribose 5-phosphate isomerase. This family is a member of the RpiB/LacA/LacB subfamily (TIGR00689) but lies outside the RpiB equivalog (TIGR01120) which is also a member of that subfamily. Ribose 5-phosphate isomerase is an essential enzyme of the pentose phosphate pathway; a pathway that appears to be present in the actinobacteria. The only candidates for ribose 5-phosphate isomerase in the Actinobacteria are members of this family.
Probab=24.29 E-value=4.3e+02 Score=22.22 Aligned_cols=70 Identities=9% Similarity=-0.063 Sum_probs=45.0
Q ss_pred eEEEECCCCChH--HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCceee
Q 020474 214 KLIVDGANGVGG--EKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQVWME 288 (325)
Q Consensus 214 kIvvD~~nG~g~--~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaDRl~ 288 (325)
||++.+.|.--. ..+...|+..| ++++-+.... ... +..-+++-....+.|.+ ..+|.|+.++|-|-=+.
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~g-~eV~D~G~~~-~~~--~~dYpd~a~~va~~V~~-~~~~~GIliCGtGiG~s 73 (148)
T TIGR02133 2 RVVLGHDHAGFEYKEALWLDLAAHE-PEVCDVGVYD-ADD--DDDYPCFCIAAAEAVAR-DAADLGIVIGGSGNGEA 73 (148)
T ss_pred EEEEEeCchhHHHHHHHHHHHHHCC-CEEEECCCCC-CCC--CCCchHHHHHHHHHHhc-CCCceEEEEcCCChhhe
Confidence 688888886432 23566677778 6665543311 000 11135566777888888 88999999999997554
No 102
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=23.98 E-value=1.2e+02 Score=28.17 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=25.6
Q ss_pred CCeEEEECCCCChH----HHHHHHHHHcCCcc--EEEEcCCCCC
Q 020474 212 EDKLIVDGANGVGG----EKLEVIKEKLNELD--IEVRNSGKEG 249 (325)
Q Consensus 212 ~~kIvvD~~nG~g~----~~~~~ll~~Lg~~~--v~~in~~~d~ 249 (325)
++.|++||.|++|. ..+...--.+| ++ ++..|.+||.
T Consensus 196 ~~pV~~D~sHs~G~~~~v~~~~~aAva~G-a~Gl~iE~H~~pd~ 238 (266)
T PRK13398 196 HLPIIVDPSHATGRRELVIPMAKAAIAAG-ADGLMIEVHPEPEK 238 (266)
T ss_pred CCCEEEeCCCcccchhhHHHHHHHHHHcC-CCEEEEeccCCccc
Confidence 57899999999983 23333445678 77 6666776664
No 103
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=23.54 E-value=1.3e+02 Score=28.88 Aligned_cols=55 Identities=18% Similarity=0.164 Sum_probs=34.2
Q ss_pred CCeEEEECCCCChH----HHHHHHHHHcCCcc--EEEEcCCCCCCCCCCCCCCcchhhhhccC
Q 020474 212 EDKLIVDGANGVGG----EKLEVIKEKLNELD--IEVRNSGKEGGVLNEGVGADFVQKEKVVP 268 (325)
Q Consensus 212 ~~kIvvD~~nG~g~----~~~~~ll~~Lg~~~--v~~in~~~d~~~~n~~~~~~~l~~l~~~v 268 (325)
.+.|++||.|+.|. ..+....-.+| ++ ++..|.+||... ...+-+-.++++.+++
T Consensus 262 ~lPVi~d~sH~~G~~~~v~~~a~AAvA~G-AdGliIE~H~~pd~al-sD~~~sl~p~e~~~lv 322 (335)
T PRK08673 262 HLPVIVDPSHATGKRDLVEPLALAAVAAG-ADGLIVEVHPDPEKAL-SDGPQSLTPEEFEELM 322 (335)
T ss_pred CCCEEEeCCCCCccccchHHHHHHHHHhC-CCEEEEEecCCcccCC-CcchhcCCHHHHHHHH
Confidence 58899999999986 34445556788 78 777787776432 2222233344444443
No 104
>TIGR01119 lacB galactose-6-phosphate isomerase, LacB subunit. This family contains four members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=23.47 E-value=2.2e+02 Score=24.71 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=41.8
Q ss_pred eEEEECCCCChH--HHHHHHHHHcCCccEEEEcCCCCCCCCCCCCCCcchhhhhccCCCCCCCcEEEEecCcCc
Q 020474 214 KLIVDGANGVGG--EKLEVIKEKLNELDIEVRNSGKEGGVLNEGVGADFVQKEKVVPHGFGSNHAGISFSGVQV 285 (325)
Q Consensus 214 kIvvD~~nG~g~--~~~~~ll~~Lg~~~v~~in~~~d~~~~n~~~~~~~l~~l~~~v~~~~~ad~Gia~DgDaD 285 (325)
||++-+.|.--. ..+.+.|+..| .+|+-+-.... . +.--+++-....+.|.+ ..+|.||.++|-|=
T Consensus 2 kI~igsDhaG~~lK~~l~~~L~~~G-~eV~D~G~~~~--~--~~dYpd~a~~va~~V~~-g~~~~GIliCGTGi 69 (171)
T TIGR01119 2 KIAIGCDHIVTDVKMEVSEFLKSKG-YEVLDVGTYDF--T--RTHYPIFGKKVGEAVVS-GEADLGVCICGTGV 69 (171)
T ss_pred EEEEEeCCchHHHHHHHHHHHHHCC-CEEEEeCCCCC--C--CCChHHHHHHHHHHHHc-CCCCEEEEEcCCcH
Confidence 678877776432 23456677778 67665543211 0 11134455667777777 78999999999885
No 105
>COG3414 SgaB Phosphotransferase system, galactitol-specific IIB component [Carbohydrate transport and metabolism]
Probab=22.63 E-value=1.5e+02 Score=22.98 Aligned_cols=26 Identities=31% Similarity=0.555 Sum_probs=21.4
Q ss_pred CeEEEECCCCChHHH-----HHHHHHHcCCcc
Q 020474 213 DKLIVDGANGVGGEK-----LEVIKEKLNELD 239 (325)
Q Consensus 213 ~kIvvD~~nG~g~~~-----~~~ll~~Lg~~~ 239 (325)
.||++=|++|.|+-. +.++|+++| ++
T Consensus 2 ~KIL~aCG~GvgSS~~ik~kve~~l~~~g-i~ 32 (93)
T COG3414 2 IKILAACGNGVGSSTMIKMKVEEVLKELG-ID 32 (93)
T ss_pred cEEEEECCCCccHHHHHHHHHHHHHHHcC-CC
Confidence 589999999999765 478889998 64
No 106
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=22.25 E-value=44 Score=29.16 Aligned_cols=27 Identities=33% Similarity=0.422 Sum_probs=21.6
Q ss_pred EEEccCCCC--CCCCceEEECCCCCcCCC
Q 020474 62 LMITASHNK--VTDNGVKIADPSGGMLSQ 88 (325)
Q Consensus 62 VmITASHNP--~~~NGiKi~~~~G~~l~~ 88 (325)
-.+||+..| ..+|||||++-+|.++..
T Consensus 157 ~~~ta~t~~r~~~dng~~Iw~~~G~~l~~ 185 (194)
T PF08662_consen 157 YLATATTSPRLRVDNGFKIWSFQGRLLYK 185 (194)
T ss_pred EEEEEEeccceeccccEEEEEecCeEeEe
Confidence 456666654 689999999999998875
No 107
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=20.97 E-value=4.8e+02 Score=21.52 Aligned_cols=32 Identities=19% Similarity=0.465 Sum_probs=22.1
Q ss_pred ccCCCCChHHHHHHHHHHHHhhcCCceeecceecch
Q 020474 132 GRDTRPSGESLLEAAKQGISAVVGAVAHDMGILTTP 167 (325)
Q Consensus 132 g~D~r~ss~~L~~al~~Gl~s~~G~~v~dlg~~tTP 167 (325)
+-|.+..+..+ +...|.+. |-+|+|+|.-.+|
T Consensus 10 ~~D~HdiGk~i---v~~~l~~~-GfeVi~LG~~v~~ 41 (134)
T TIGR01501 10 GSDCHAVGNKI---LDHAFTNA-GFNVVNLGVLSPQ 41 (134)
T ss_pred cCChhhHhHHH---HHHHHHHC-CCEEEECCCCCCH
Confidence 44666555544 33445566 9999999998888
Done!